Citrus Sinensis ID: 007151

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610------
Protein Sequence
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIKS
Secondary Structure (PSIPRED)
cccccEEEEccccEEcccccccccEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHcccccEEEEcccccHHHHHHHHccccccEEEEccccHHHHHHHcccccHHHHHcccccEEEEEccccEEEEEccHHHHHHHHHHHHccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcccccccccccccccccccEEEEccccccccccccccccccccccccEEEEEcccccccHHHHHHHHcccEEEccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccEEEEccccccHHHHcccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEHHcccccHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHcccccEEEEEccccccEHHHEcccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHcccccEEEEccccccHHHHHccEEcHHHHHHccccEEEEccccccEEccccHHHHHHHHHHHHccccccccccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccccccHHHHHHcccccccEEEEEcccccccccccccccHHHHccccEEEEEEEcccccHHHHHHHHcccEEEcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccEEEEcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHEEEEEcc
Coil and Loop (DISEMBL)
mespnllvasgsklvsggmrknptlicvpimgeSVDKMVVDMGKANASGADLVEIRLdglknfnpreniktlikespvptlftyrpiweggqydgdeneRVDVLRLAMELGADYIDVELQVAREFNdsirgkkpekcKVIVSshnyqytpsveDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAkfggfltfgtlengivsapgqptiKDLLDLYnfrqmgpdtkvfgiigkpvghskspilyneafksvgfNGVFVHLLVDDIAKFFQtyssndfagfsctiphkeaavkccDEVDTVAKSIGAVNciirrqsdgklfgyntdyvGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGghalsladlenfnpedgmilanttsigmqpkvdetpipkhalgHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYErftglpgkmnaphLYKFFVLLLYSFNKFHIFTYFLfsfgnfsaegtisenhGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFfgqkykrstctSILCMEIKS
Flexible Loop (DISEMBL)
mespnllvasgsklvsggmrknpTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGlknfnpreniktlikespvptlFTYRpiweggqydgdeNERVDVLRLAMELGADYIDVELQVAREfndsirgkkpekCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKsigavnciirrqsdgklfgYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALaygakakgarVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIKS
Low Complexity Region (SEG)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIgaggagkalaygakakgaRVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIKS
Disordered region (IsUnstruct)
*********************NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCME***
Disordered Region (DISOPRED)
****NLL**************N*TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLE******PGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIK*
Disordered Region (DISEMBL)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIKS
Disordered Region (DISPRO)
***PNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR******VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKRSTCTSILCMEIKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	616	2.2.26 [Sep-21-2011]
Q9SQT8	603	Bifunctional 3-dehydroqui	yes	no	0.842	0.860	0.744	0.0
Q6HDI8	277	Shikimate dehydrogenase O	yes	no	0.405	0.902	0.366	2e-40
B7JNW6	277	Shikimate dehydrogenase O	yes	no	0.405	0.902	0.366	2e-40
C3L5T8	277	Shikimate dehydrogenase O	yes	no	0.405	0.902	0.366	2e-40
Q730K1	277	Shikimate dehydrogenase O	yes	no	0.407	0.906	0.360	6e-40
A0RIV1	277	Shikimate dehydrogenase O	yes	no	0.405	0.902	0.362	6e-40
Q634K8	277	Shikimate dehydrogenase O	yes	no	0.405	0.902	0.362	7e-40
B9IYA1	277	Shikimate dehydrogenase O	yes	no	0.399	0.888	0.361	8e-40
B7HPN3	277	Shikimate dehydrogenase O	yes	no	0.399	0.888	0.361	8e-40
A9VHW1	277	Shikimate dehydrogenase O	yes	no	0.404	0.898	0.365	1e-39

>sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/524 (74%), Positives = 447/524 (85%), Gaps = 5/524 (0%)

Query: 1   MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
           ME  N+ VAS S   ++ S  + KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRL
Sbjct: 68  MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127

Query: 58  DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
           D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct: 128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187

Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
           ELQVA EF  SI GKKP K KVIVSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+
Sbjct: 188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247

Query: 178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
           DI DVAR+F IT  +QVP IGLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTI
Sbjct: 248 DIADVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTI 307

Query: 238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 297
           KDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F 
Sbjct: 308 KDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFL 367

Query: 298 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 357
           Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+
Sbjct: 368 QAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGS 427

Query: 358 ISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD 415
           ISAIEDGLR  G  +     SS LA K  VVIGAGGAGKALAYGAK KGA+VVIANRTY+
Sbjct: 428 ISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 487

Query: 416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
           RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFD
Sbjct: 488 RALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFD 547

Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
           AVYTP+ITRLLREAEESGA  VSG EMF+ QAYEQ+E FTGLP 
Sbjct: 548 AVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPA 591

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5

>sp|Q6HDI8|AROE_BACHK Shikimate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=aroE PE=3 SV=1

 Score =  167 bits (424), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
            EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus thuringiensis subsp. konkukian (strain 97-27) (taxid: 281309)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|B7JNW6|AROE_BACC0 Shikimate dehydrogenase OS=Bacillus cereus (strain AH820) GN=aroE PE=3 SV=1

 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
            EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus cereus (strain AH820) (taxid: 405535)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|C3L5T8|AROE_BACAC Shikimate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=aroE PE=3 SV=1

 Score =  167 bits (423), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   RLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
            EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus anthracis (strain CDC 684 / NRRL 3495) (taxid: 568206)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q730K1|AROE_BACC1 Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=aroE PE=3 SV=1

 Score =  166 bits (419), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 158/269 (58%), Gaps = 18/269 (6%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGGHALS 430
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL         S
Sbjct: 114 S---SKPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACKATVHS 170

Query: 431 LA-DLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
           +A  LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L 
Sbjct: 171 VALSLEKATEEQGNYDIIIQTTTIGMHPRVEHTPLQISSLNKGTIVSDIIYNPFETKILC 230

Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
           EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 231 EAKEQGAMIQNGIDMFVYQGALAFEMWTG 259

Bacillus cereus (strain ATCC 10987) (taxid: 222523)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|A0RIV1|AROE_BACAH Shikimate dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=aroE PE=3 SV=1

 Score =  166 bits (419), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  +GKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--NGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
            EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus thuringiensis (strain Al Hakam) (taxid: 412694)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q634K8|AROE_BACCZ Shikimate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=aroE PE=3 SV=1

 Score =  166 bits (419), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/270 (36%), Positives = 163/270 (60%), Gaps = 20/270 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL--AETVGGHA 428
           S   +  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL  A T   H+
Sbjct: 114 S---NEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELIAACTATVHS 170

Query: 429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
           ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct: 171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query: 487 REAEESGATIVSGLEMFIGQAYEQYERFTG 516
            EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus cereus (strain ZK / E33L) (taxid: 288681)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|B9IYA1|AROE_BACCQ Shikimate dehydrogenase OS=Bacillus cereus (strain Q1) GN=aroE PE=3 SV=1

 Score =  165 bits (418), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 28/274 (10%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL      TV  
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATVHS 170

Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
            ALSL +     EN++     I+  TT+IGM P+V+ TP+   +L    +V D +Y P  
Sbjct: 171 VALSLEEATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225

Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259

Bacillus cereus (strain Q1) (taxid: 361100)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|B7HPN3|AROE_BACC7 Shikimate dehydrogenase OS=Bacillus cereus (strain AH187) GN=aroE PE=3 SV=1

 Score =  165 bits (418), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 162/274 (59%), Gaps = 28/274 (10%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
           S   S  L  K  +++GAGGA +A+ +     G + + +ANRT D+A+EL      TV  
Sbjct: 114 S---SEPLQEKRILLLGAGGASRAIYFSLADVGVKEIDVANRTVDKAKELITACTATVHS 170

Query: 427 HALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
            ALSL +     EN++     I+  TT+IGM P+V+ TP+   +L    +V D +Y P  
Sbjct: 171 VALSLEEATEEQENYD-----IIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFE 225

Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct: 226 TKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259

Bacillus cereus (strain AH187) (taxid: 405534)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|A9VHW1|AROE_BACWK Shikimate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=aroE PE=3 SV=1

 Score =  165 bits (417), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 160/271 (59%), Gaps = 22/271 (8%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           +++G+IG P+GHS SP+++N+AF+ +  +  ++  LV++  + +  +   +   +GF+ T
Sbjct: 3   QLYGVIGNPIGHSLSPVMHNDAFEHLNMDAHYLAFLVEEEALGEAVKGLKALGISGFNVT 62

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            PHK A ++  DE+  +A+ IGAVN ++ R  DGKL GYNTD +G + A++       ++
Sbjct: 63  TPHKVAIMEYLDEIAPLARQIGAVNTVVHR--DGKLIGYNTDGIGFVRALQ-------SI 113

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRTYDRAREL----AETVGG 426
           S      L  K  ++IGAGGA +A+ +     G + + IANRT D+A+ L     E V  
Sbjct: 114 S---EDPLQEKRILLIGAGGASRAIYFSLADVGVKEIDIANRTRDKAKNLISGCMENVNS 170

Query: 427 HALSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
           HALSL    EN    D  I+  TT+IGM P V+ TP+   +L    +V D +Y P  T++
Sbjct: 171 HALSLECAAENQGEYD--IIIQTTTIGMHPHVEYTPLEIRSLKQGTIVSDIIYNPFETKI 228

Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           L +A+E GA I +G++MF+ Q    +E +TG
Sbjct: 229 LGDAKEQGAIIQNGIDMFVYQGALAFEMWTG 259

Bacillus weihenstephanensis (strain KBAB4) (taxid: 315730)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	616
255551621	539	shikimate dehydrogenase, putative [Ricin	0.823	0.940	0.820	0.0
224107417	538	dehydroquinate dehydratase/ shikimate de	0.818	0.936	0.821	0.0
359477446	522	PREDICTED: bifunctional 3-dehydroquinate	0.831	0.980	0.809	0.0
58047529	508	3-dehydroquinate dehydratase/shikimate 5	0.805	0.976	0.828	0.0
76782194	536	putative 3-dehydroquinate dehydratase/sh	0.832	0.957	0.779	0.0
297736925	495	unnamed protein product [Vitis vinifera]	0.795	0.989	0.816	0.0
356495945	527	PREDICTED: bifunctional 3-dehydroquinate	0.836	0.977	0.772	0.0
281193024	526	dehydroquinate dehydratase [Solanum tube	0.827	0.969	0.765	0.0
388521847	515	unknown [Medicago truncatula]	0.808	0.966	0.770	0.0
449503035	542	PREDICTED: bifunctional 3-dehydroquinate	0.811	0.922	0.770	0.0

>gi|255551621|ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis] gi|223543944|gb|EEF45470.1| shikimate dehydrogenase, putative [Ricinus communis]

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/508 (82%), Positives = 459/508 (90%), Gaps = 1/508 (0%)

Query: 11  GSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIK 70
           GS+ V GG+RKNPTLIC PIM +SVDKM++++ KA  +GADLVEIRLD LK FN  ++IK
Sbjct: 20  GSRGV-GGLRKNPTLICAPIMADSVDKMLINLVKAKENGADLVEIRLDSLKTFNASDDIK 78

Query: 71  TLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIR 130
           TLI  SP+PTLFTYRP WEGG+YDGDENER+D LRLAMELGADYIDVEL+VA +FNDSIR
Sbjct: 79  TLITRSPLPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIR 138

Query: 131 GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV 190
           G KP KCKVIVSSHNY  TPSVEDL NLVA IQA+GADIVK ATTALDITDVAR+FQITV
Sbjct: 139 GNKPAKCKVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITV 198

Query: 191 HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMG 250
           HSQVPIIG+VMGERGLISRILCAKFGG+LTFGTLE+GIVSAPGQP IKDLLDLYNFRQ+G
Sbjct: 199 HSQVPIIGIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIG 258

Query: 251 PDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSC 310
           PDTKV+GIIGKPVGHSKSP+LYNEAFKSVGFNGV+VHLLVDDIA F QT+SS DFAGFSC
Sbjct: 259 PDTKVYGIIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSC 318

Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
           TIPHKEAAV CCD +D+VA+SIGAVNCIIRRQ DGKLFGYNTDY GAI+AIE+GLR   N
Sbjct: 319 TIPHKEAAVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGLRVSQN 378

Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
           +SG   S LAGKLFVVIGAGGAGKALAYGAK KGA+VVIANRTY+RA+ LA+ VGG A++
Sbjct: 379 ISGAADSPLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGLADAVGGVAIA 438

Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE 490
           LADL NF PE GM+LANTTSIGMQPKV+ETPIPKHAL +Y+LVFDAVYTPKITRLLREAE
Sbjct: 439 LADLGNFRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTPKITRLLREAE 498

Query: 491 ESGATIVSGLEMFIGQAYEQYERFTGLP 518
           ESGA  VSGLEMFIGQAYEQ+E FTGLP
Sbjct: 499 ESGAATVSGLEMFIGQAYEQFENFTGLP 526

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107417|ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa]

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/504 (82%), Positives = 457/504 (90%)

Query: 16  SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
           SGG+R+NPTLIC PIM +SVDKM + M +A + GADLVEIRLD LK+FNP  +IKTLI  
Sbjct: 23  SGGVRRNPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILH 82

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
           SP+PTLFTYRP+WEGGQY+GDE  R+D LRLAMELGADYIDVEL+VA EFN+ +RG KP 
Sbjct: 83  SPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPG 142

Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVP 195
           KCK+IVSSHNY+ TPSVE+L NLVARIQA+GADIVK ATTALDI+DVAR+FQITVHSQVP
Sbjct: 143 KCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQVP 202

Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKV 255
           IIGLVMGERGLISRILCAKFGG+LTFGTLE+G+VSAPGQPTIKDLLDLYNFR +GPDTKV
Sbjct: 203 IIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTKV 262

Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHK 315
           FGIIGKPVGHSKSP+L+NEAFKSVG NGV+VHLLVDDIA+F QTYSS DFAGFSCTIPHK
Sbjct: 263 FGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGFSCTIPHK 322

Query: 316 EAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGV 375
           E A KCCDEV  VAKSIGAVNCIIRRQ+DGKLFGYNTDYVGAISAIE+GLR   NVS  V
Sbjct: 323 EDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVSNTV 382

Query: 376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
            S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RA+ LA+ +GG A++LADLE
Sbjct: 383 GSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLADLE 442

Query: 436 NFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT 495
           NF+PEDGMILANTTSIGMQPKVDETP+ K+AL  Y+LVFDAVYTPKITRLLREAEESGA 
Sbjct: 443 NFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEESGAK 502

Query: 496 IVSGLEMFIGQAYEQYERFTGLPG 519
           IV+GLEMFIGQAYEQ+ERFT LP 
Sbjct: 503 IVTGLEMFIGQAYEQFERFTELPA 526

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477446|ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Vitis vinifera]

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/520 (80%), Positives = 462/520 (88%), Gaps = 8/520 (1%)

Query: 16  SGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE 75
           SGGM KN TLICVPIMGE+++KMVVDM KA  SGADLVE+RLD LK FNPR++++ LI++
Sbjct: 3   SGGMSKNSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRK 62

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPE 135
            P+PTLFTYRP WEGGQY+GDEN R D LRLAMELGADY+D+EL+VA EF +SI G+KPE
Sbjct: 63  CPLPTLFTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPE 122

Query: 136 KCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV- 194
           K KVIVSSHNYQ TPSVEDL NLV  IQA+GADIVK ATTAL+ITDVAR+FQITVHSQV 
Sbjct: 123 KFKVIVSSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVS 182

Query: 195 --PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPD 252
             P+IGLVMGERGLISRILC KF G+LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPD
Sbjct: 183 SVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPD 242

Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTI 312
           TKVFG+IGKPV HSKSP LYNEAFKSVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTI
Sbjct: 243 TKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTI 302

Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVS 372
           PHKEAA+KCCDEV  VAKSIGAVNCIIRR SDGKLFGYNTDYVGAISAIEDGLR    +S
Sbjct: 303 PHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKIS 362

Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
               S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY RARELA+ VGG ALSLA
Sbjct: 363 STSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLA 422

Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
           DL NF+PE+GMILANTTSIGMQPKVDETPI KHAL +Y+LVFDA+YTPKITRLLREA+ES
Sbjct: 423 DLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQES 482

Query: 493 GATIVSGLEMFIGQAYEQYERFTGLPGKMNAP-HLYKFFV 531
           GATIV+GLEMFIGQAYEQ+ERFTGLP    AP  L+K F+
Sbjct: 483 GATIVTGLEMFIGQAYEQFERFTGLP----APKELFKQFI 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|58047529|gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia]

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/496 (82%), Positives = 445/496 (89%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFT 83
           TL+C PIM ESVDKMV++M KA    ADLVEIRLD LK+FNP  ++KT+IK SP+PTLFT
Sbjct: 1   TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60

Query: 84  YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
           YRP WEGGQYDGDE +R+D LRLAME GADYIDVELQVA EFNDSI G+KPE  KVIVSS
Sbjct: 61  YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120

Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGE 203
           HNYQ TPS EDL NLVARIQA+GADIVK ATTAL+I DVAR+FQITVHSQVPIIG+VMGE
Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180

Query: 204 RGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPV 263
           RG +SRILC KFGGFLTFGT+E+GIVSAPGQPT+KDLL LYN R++GPDTKVFGIIGKPV
Sbjct: 181 RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240

Query: 264 GHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCD 323
            HSKSPILYNEAFKSV FNGV++ LLVDDIA F QTYSS DFAGFSCTIPHKEAA+KCCD
Sbjct: 241 HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEAALKCCD 300

Query: 324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKL 383
           EVD VAKSIGAVNCIIRR +DGKL GYNTDYVGAISAIEDGLRG  N S    S LAGKL
Sbjct: 301 EVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADSPLAGKL 360

Query: 384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
           FVVIGAGGAGKALAYGAK KGARVVIANRTYDRARELA+T+GG ALSLADL+NF+PEDGM
Sbjct: 361 FVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPEDGM 420

Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF 503
           ILAN+TSIGMQPKVDETPIPKHAL  Y+LVFDAVYTPK+TRLLREAEESGA IV+GLEMF
Sbjct: 421 ILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLEMF 480

Query: 504 IGQAYEQYERFTGLPG 519
           IGQAYEQ+ERFTGLP 
Sbjct: 481 IGQAYEQFERFTGLPA 496

Source: Juglans regia

Species: Juglans regia

Genus: Juglans

Family: Juglandaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76782194|gb|ABA54867.1| putative 3-dehydroquinate dehydratase/shikimate dehydrogenase [Fagus sylvatica]

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/530 (77%), Positives = 460/530 (86%), Gaps = 17/530 (3%)

Query: 1   MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
           M+S N+L+AS S   ++  G +RKNPTL+C PIM ESVDKMV++M KA   GADLVEIRL
Sbjct: 1   MDSTNVLLASSSASLQIGGGEIRKNPTLVCAPIMAESVDKMVINMDKAKQGGADLVEIRL 60

Query: 58  DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
           D LK+FNP  ++KTLIKE P+PTLFTYRP WEGGQYDGDE +R+D LRLAME GADYIDV
Sbjct: 61  DSLKSFNPNGDLKTLIKECPLPTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDV 120

Query: 118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
           ELQVA+EFN+SI GKKPE  KVIVSSHNYQ TPSVEDL NLVARIQA+GADIVKFATTAL
Sbjct: 121 ELQVAQEFNESIYGKKPEMFKVIVSSHNYQNTPSVEDLGNLVARIQATGADIVKFATTAL 180

Query: 178 DITDVARVFQITVHSQV---PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ 234
           +ITDVAR+FQI VHSQV   PII +VMGERG ISRILC KFGGFL+FGT+E+GIVSAPGQ
Sbjct: 181 EITDVARIFQIIVHSQVSSVPIIAIVMGERGFISRILCPKFGGFLSFGTIESGIVSAPGQ 240

Query: 235 PTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIA 294
           P +KDLL LYNFRQ+GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGV+V      ++
Sbjct: 241 PIMKDLLHLYNFRQIGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVYV------LS 294

Query: 295 KFFQTYSSND-----FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFG 349
            +     S D     FAGFS TIPHKEAA+KCCDEVD VAKSIGAVNCI+RR +DGK+FG
Sbjct: 295 WWMTCKISPDLLILRFAGFSITIPHKEAALKCCDEVDPVAKSIGAVNCIVRRSTDGKIFG 354

Query: 350 YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI 409
           YNTDYVGAISAIEDGLRG  N+S    S LAGKLFVVIGAGGAGKALAYGAK KGARVVI
Sbjct: 355 YNTDYVGAISAIEDGLRGSKNISYAADSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVI 414

Query: 410 ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH 469
           ANRTY+RA+E+A+TVGG ALSLADLENF+PEDGMILANTTSIGMQPKVDETPIPKHAL  
Sbjct: 415 ANRTYERAKEIADTVGGQALSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRS 474

Query: 470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
           Y++VFDAVYTPKITRLLRE+EESGA IV+G+EMFIGQA+EQ+ERFTGLP 
Sbjct: 475 YSVVFDAVYTPKITRLLRESEESGAIIVTGVEMFIGQAFEQFERFTGLPA 524

Source: Fagus sylvatica

Species: Fagus sylvatica

Genus: Fagus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736925|emb|CBI26126.3| unnamed protein product [Vitis vinifera]

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/495 (81%), Positives = 442/495 (89%), Gaps = 5/495 (1%)

Query: 38  MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDE 97
           MVVDM KA  SGADLVE+RLD LK FNPR++++ LI++ P+PTLFTYRP WEGGQY+GDE
Sbjct: 1   MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDE 60

Query: 98  NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
           N R D LRLAMELGADY+D+EL+VA EF +SI G+KPEK KVIVSSHNYQ TPSVEDL N
Sbjct: 61  NSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGN 120

Query: 158 LVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGG 217
           LV  IQA+GADIVK ATTAL+ITDVAR+FQITVHSQVP+IGLVMGERGLISRILC KF G
Sbjct: 121 LVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSG 180

Query: 218 FLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFK 277
           +LTFG+LE GIVSAPGQPTIKDLL+LYNFRQ+GPDTKVFG+IGKPV HSKSP LYNEAFK
Sbjct: 181 YLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFK 240

Query: 278 SVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
           SVGFNGV+VHLLVDDIAKFF TYS+ DFAGFSCTIPHKEAA+KCCDEV  VAKSIGAVNC
Sbjct: 241 SVGFNGVYVHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNC 300

Query: 338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA 397
           IIRR SDGKLFGYNTDYVGAISAIEDGLR    +S    S LAGKLFVVIGAGGAGKALA
Sbjct: 301 IIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKALA 360

Query: 398 YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV 457
           YGAK KGARVVIANRTY RARELA+ VGG ALSLADL NF+PE+GMILANTTSIGMQPKV
Sbjct: 361 YGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKV 420

Query: 458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
           DETPI KHAL +Y+LVFDA+YTPKITRLLREA+ESGATIV+GLEMFIGQAYEQ+ERFTGL
Sbjct: 421 DETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGL 480

Query: 518 PGKMNAP-HLYKFFV 531
           P    AP  L+K F+
Sbjct: 481 P----APKELFKQFI 491

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495945|ref|XP_003516831.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Glycine max]

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/519 (77%), Positives = 447/519 (86%), Gaps = 4/519 (0%)

Query: 1   MESPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGL 60
           M+SPN L    S   + G RKN TLICVPIMGESV+KM +D+ KA A GADLVEIRLD L
Sbjct: 1   MDSPNAL----STAPAAGSRKNATLICVPIMGESVEKMEIDVDKAKAGGADLVEIRLDSL 56

Query: 61  KNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQ 120
           K F+P  ++   I+   +P LFTYRP WEGG YDGDEN+R+D LRLAMELGADYID+ELQ
Sbjct: 57  KTFDPYRDLNAFIQHRSLPLLFTYRPKWEGGMYDGDENKRLDALRLAMELGADYIDIELQ 116

Query: 121 VAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT 180
           VA EF DSIRGK   K KVIVSSHNYQ TPS+EDL NLVARIQA+GADIVK ATTALDIT
Sbjct: 117 VAHEFYDSIRGKTFNKTKVIVSSHNYQLTPSIEDLGNLVARIQATGADIVKIATTALDIT 176

Query: 181 DVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
           DVAR+FQI VHSQVP IGLVMG+RGLISRIL AKFGG+LTFGTLE+G+VSAPGQPT+KDL
Sbjct: 177 DVARMFQIMVHSQVPFIGLVMGDRGLISRILSAKFGGYLTFGTLESGVVSAPGQPTLKDL 236

Query: 241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
           L LYN RQ+ PDTKVFGIIGKPVGHSKSPIL+NE FKS+G NGV++ LLVDD+A F +TY
Sbjct: 237 LYLYNLRQLAPDTKVFGIIGKPVGHSKSPILFNEVFKSIGLNGVYLFLLVDDLANFLRTY 296

Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
           SS DF GFS TIPHKE A+KCCDEVD VAKSIGAVNCI+RR +DGKL GYNTDYVGAI+A
Sbjct: 297 SSTDFVGFSVTIPHKETALKCCDEVDPVAKSIGAVNCIVRRPTDGKLIGYNTDYVGAITA 356

Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
           IE+GLRG+ N S    S LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD AR+L
Sbjct: 357 IENGLRGKHNGSSTTISPLAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDHARKL 416

Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
           A  +GG AL+LADL+N++PEDGMILANTTSIGMQPKVDETP+ KHAL +Y+LVFDAVYTP
Sbjct: 417 AYAIGGDALALADLDNYHPEDGMILANTTSIGMQPKVDETPVSKHALKYYSLVFDAVYTP 476

Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
           KITRLL+EAEESGATIV+GLEMF+GQAY QYE FTGLP 
Sbjct: 477 KITRLLKEAEESGATIVTGLEMFMGQAYGQYENFTGLPA 515

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|281193024|gb|ADA57640.1| dehydroquinate dehydratase [Solanum tuberosum]

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/516 (76%), Positives = 446/516 (86%), Gaps = 6/516 (1%)

Query: 6   LLVASGSKLVSG-GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN 64
           L+V SG K + G  MRKN TLIC PIM +SVD+M++ M KA  SGADLV +R+D LK+FN
Sbjct: 3   LVVDSGVKKMEGEAMRKNQTLICAPIMADSVDQMLILMQKAKTSGADLVGVRVDSLKSFN 62

Query: 65  PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVARE 124
           PR +I  LIK+ P+PTLFTYRP WEGGQY GDE  R+D LRLAMELGADYIDVEL+   E
Sbjct: 63  PRPDIDALIKQCPLPTLFTYRPTWEGGQYAGDEMSRLDALRLAMELGADYIDVELKAIDE 122

Query: 125 FNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR 184
           FN+++ G K  KCK+IVSSHNY+ TPS EDL NLVARIQASGADIVKFATTA DITDVAR
Sbjct: 123 FNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQASGADIVKFATTAQDITDVAR 182

Query: 185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
           VFQITVHSQVPII +VMGE+GL+SRILC KFGG+LTFGTLE G VSAPGQPT++DLL+LY
Sbjct: 183 VFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGTLEMGKVSAPGQPTVEDLLNLY 242

Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSND 304
           NFRQ+GPDTK+FGIIGKPV HSK P+LYNE+F+SVGFNGVF+HLLVDDIA FF+TYSS D
Sbjct: 243 NFRQLGPDTKIFGIIGKPVSHSKPPLLYNESFRSVGFNGVFMHLLVDDIANFFRTYSSLD 302

Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
           FAGFSCTIPHKEAA+ CC E+D  AK+IGAVNCIIRR  DGKLFG NTDY+GAISAIE+G
Sbjct: 303 FAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRR-PDGKLFGCNTDYIGAISAIEEG 361

Query: 365 LRG-RLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
           L+G + ++SG   S LAGKLFVVIGAGGAGKA+AYGAK KGARVVIANRTY+RARELA  
Sbjct: 362 LQGSQPSISG---SPLAGKLFVVIGAGGAGKAIAYGAKEKGARVVIANRTYERARELAIV 418

Query: 424 VGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
           VG  ALSL +L NF+PE+ MILANTTSIGMQPKVD+TPI K AL HY LVFDAVYTPKIT
Sbjct: 419 VGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYPLVFDAVYTPKIT 478

Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPG 519
           RLLREA+ESGA IV+G+EMFIGQAYEQYERFTGLP 
Sbjct: 479 RLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPA 514

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521847|gb|AFK48985.1| unknown [Medicago truncatula]

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/502 (77%), Positives = 441/502 (87%), Gaps = 4/502 (0%)

Query: 22  NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPT 80
           N TLICVPIMGE++ KM+ D+ KA  +GADLVEIRLD LK FNP +++ T +++   +P 
Sbjct: 2   NATLICVPIMGETIQKMIADIQKAKLNGADLVEIRLDSLKTFNPSQDLNTFMQQHHSLPF 61

Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGG Y+GDEN+R+D LRLAMEL ADYID+EL+VA +F DSIRGK   K KVI
Sbjct: 62  LFTYRPKWEGGMYEGDENQRLDALRLAMELEADYIDIELKVAHQFYDSIRGKTYNKTKVI 121

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV---PII 197
           VSSHNYQ TPSVEDL NLVARIQA+GADIVK ATTA++ITDVAR+F+I VHSQV   P I
Sbjct: 122 VSSHNYQQTPSVEDLGNLVARIQATGADIVKIATTAVEITDVARMFEIMVHSQVRHVPFI 181

Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFG 257
           GLVMG+RGLISRILCAKFGG+LTFGTLE+G+VSAPGQPT+KDLL LYNFRQ+GPDTKV+G
Sbjct: 182 GLVMGDRGLISRILCAKFGGYLTFGTLESGVVSAPGQPTLKDLLHLYNFRQIGPDTKVYG 241

Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEA 317
           I+GKPV HSKSPIL+NEAFK++GF+GVFV LLVDD+A F +TYSS DF GFS TIPHKEA
Sbjct: 242 IVGKPVSHSKSPILFNEAFKTIGFDGVFVFLLVDDLANFLRTYSSTDFVGFSVTIPHKEA 301

Query: 318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSS 377
           A+KCCDEVD VAKSIGAVNC++RR +DGKL GYNTDYVGAISAIEDGLRG+   SG   S
Sbjct: 302 ALKCCDEVDPVAKSIGAVNCVVRRPTDGKLIGYNTDYVGAISAIEDGLRGKHIDSGTAVS 361

Query: 378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
            LAGKLFVVIGAGGAGKALAYGAK KGAR+VIANRTYDRARELA+ +GG AL+L DL+N+
Sbjct: 362 PLAGKLFVVIGAGGAGKALAYGAKEKGARIVIANRTYDRARELADVIGGDALTLNDLDNY 421

Query: 438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV 497
           +PEDGMILANTTSIGMQPKVDETPI KHAL  Y+LVFDAVYTPK+TRLL+EAEESGATIV
Sbjct: 422 HPEDGMILANTTSIGMQPKVDETPISKHALKFYSLVFDAVYTPKMTRLLKEAEESGATIV 481

Query: 498 SGLEMFIGQAYEQYERFTGLPG 519
           +GLEMFIGQAY QYE +TGLP 
Sbjct: 482 TGLEMFIGQAYRQYEHYTGLPA 503

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503035|ref|XP_004161812.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Cucumis sativus]

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/501 (77%), Positives = 437/501 (87%), Gaps = 1/501 (0%)

Query: 19  MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPV 78
           +++N +L+CVPIM +S D M+ D  KA  SGADLVEIRLD LK FN + ++ TL+KE P+
Sbjct: 28  IKRNSSLVCVPIMADSADLMIADARKAKTSGADLVEIRLDSLKIFNQQTDLGTLVKECPL 87

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCK 138
           PTLFTYRP WEGGQYDGDENER++VLRL MELGADY+DVELQVAREF DSIRGKKPEKCK
Sbjct: 88  PTLFTYRPKWEGGQYDGDENERLEVLRLVMELGADYVDVELQVAREFIDSIRGKKPEKCK 147

Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIG 198
           VIVSSHNY+ TPS++DL  LVARIQ SGADIVK ATTA DITDV+R+F I VHSQVP+IG
Sbjct: 148 VIVSSHNYEETPSLDDLGKLVARIQESGADIVKIATTARDITDVSRIFHIIVHSQVPLIG 207

Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGI 258
           LVMGERGLISRILCAKFGG+LTF TLE GIVSAPGQPTI+DLL LYNFRQ+GPDTKV+GI
Sbjct: 208 LVMGERGLISRILCAKFGGYLTFATLEAGIVSAPGQPTIQDLLTLYNFRQIGPDTKVYGI 267

Query: 259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAA 318
           IGKPVGHSKSP+L+NEAFKS+ FNGV+VH LVDDI  F QTYSS DFAGFSCTIPHKEAA
Sbjct: 268 IGKPVGHSKSPMLFNEAFKSIRFNGVYVHYLVDDIVNFLQTYSSLDFAGFSCTIPHKEAA 327

Query: 319 VKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSA 378
            K CDEVD VAKSIGAVNCI+RR  DGK  GYNTDYVGAISAIE+ L+G    S    S 
Sbjct: 328 AKFCDEVDPVAKSIGAVNCIVRRH-DGKFCGYNTDYVGAISAIEEKLQGDYTGSPLSGSP 386

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
           L G+LFVVIGAGGAGKALAYGAK KGA+V+IANRTY+RA+ELA+T+GG A++LADL NF+
Sbjct: 387 LFGRLFVVIGAGGAGKALAYGAKEKGAKVMIANRTYERAKELADTIGGDAITLADLNNFH 446

Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
           PED MILANTTSIGMQPKV+ETPI K AL +Y+LVFDAVYTP +TRLL++AE SGA IV+
Sbjct: 447 PEDNMILANTTSIGMQPKVEETPIAKDALRYYSLVFDAVYTPVMTRLLKDAEASGAKIVT 506

Query: 499 GLEMFIGQAYEQYERFTGLPG 519
           GLEMF+GQAYEQYERFTG+P 
Sbjct: 507 GLEMFVGQAYEQYERFTGMPA 527

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	616
TAIR|locus:2081036	603	MEE32 "MATERNAL EFFECT EMBRYO	0.840	0.859	0.713	1.7e-194
TIGR_CMR|BA_4561	308	BA_4561 "shikimate 5-dehydroge	0.469	0.938	0.332	1.6e-35
TIGR_CMR|SPO_3891	277	SPO_3891 "shikimate 5-dehydrog	0.402	0.895	0.369	7.9e-31
SGD|S000002534	1588	ARO1 "Pentafunctional arom pro	0.741	0.287	0.26	8.5e-31
TIGR_CMR|CHY_0623	280	CHY_0623 "shikimate 5-dehydrog	0.409	0.9	0.302	9.5e-28
POMBASE|SPAC1834.02	1573	aro1 "pentafunctional aromatic	0.748	0.293	0.271	2.4e-27
TIGR_CMR|CBU_2075	233	CBU_2075 "3-dehydroquinate deh	0.349	0.922	0.32	2.6e-27
ASPGD|ASPL0000055969	1583	aromA [Emericella nidulans (ta	0.740	0.288	0.265	2.4e-25
TIGR_CMR|GSU_1490	286	GSU_1490 "shikimate 5-dehydrog	0.410	0.884	0.312	3.1e-25
CGD|CAL0004346	1551	ARO1 [Candida albicans (taxid:	0.798	0.317	0.239	6.4e-25

TAIR|locus:2081036 MEE32 "MATERNAL EFFECT EMBRYO ARREST 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 1884 (668.3 bits), Expect = 1.7e-194, P = 1.7e-194
 Identities = 373/523 (71%), Positives = 430/523 (82%)

Query:     1 MESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRL 57
             ME  N+ VAS S   ++ S  + KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRL
Sbjct:    68 MEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRL 127

Query:    58 DGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDV 117
             D LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDV
Sbjct:   128 DWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDV 187

Query:   118 ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL 177
             ELQVA EF  SI GKKP K KVIVSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+
Sbjct:   188 ELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAV 247

Query:   178 DITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTI 237
             DI DVAR+F IT  +QVP IGLVMGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTI
Sbjct:   248 DIADVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTI 307

Query:   238 KDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFF 297
             KDLLDLYNFR++GPDTKV+GIIGKPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F 
Sbjct:   308 KDLLDLYNFRRIGPDTKVYGIIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFL 367

Query:   298 QTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGA 357
             Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+
Sbjct:   368 QAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGS 427

Query:   358 ISAIEDGLRGRLNVSG--GVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYD 415
             ISAIEDGLR   + S     SS LA K  VVI                  +VVIANRTY+
Sbjct:   428 ISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE 487

Query:   416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
             RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFD
Sbjct:   488 RALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFD 547

Query:   476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
             AVYTP+ITRLLREAEESGA  VSG EMF+ QAYEQ+E FTGLP
Sbjct:   548 AVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLP 590

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA;IDA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA;IDA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP;NAS

GO:0050661 "NADP binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0019632 "shikimate metabolic process" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

TIGR_CMR|BA_4561 BA_4561 "shikimate 5-dehydrogenase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 387 (141.3 bits), Expect = 1.6e-35, P = 1.6e-35
 Identities = 104/313 (33%), Positives = 169/313 (53%)

Query:   254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
             +++G+IG P+GHS SP+++N+AF+ +  +  +   LV +  + +  +   +   +GF+ T
Sbjct:     3 QLYGVIGNPIGHSLSPVMHNDAFEHLKMDAHYHAFLVKEEVLGEAVRGLKALGISGFNVT 62

Query:   312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
              PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++       ++
Sbjct:    63 TPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQ-------SI 113

Query:   372 SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVV-IANRTYDRAREL--AETVGGHA 428
             S   S  L  K  +++                  + + +ANRT D+A+EL  A T   H+
Sbjct:   114 S---SEPLQEKRILLLGAGGASRAIYFSLADAGVKEIDVANRTVDKAKELIAACTATVHS 170

Query:   429 LSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL 486
             ++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L
Sbjct:   171 VALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKIL 229

Query:   487 REAEESGATIVSGLEMFIGQAYEQYERFTG-LPGKMNAPHLY-KFFVLLLYSFNKFH-IF 543
              EA+E GA I +G++MF+ Q    +E +TG +P       L  +     +Y   K   IF
Sbjct:   230 CEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRNLEANIYVNRKTKKIF 289

Query:   544 TYFLFSFG-NFSA 555
             T    SF  NFS+
Sbjct:   290 TCTSTSFNTNFSS 302

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|SPO_3891 SPO_3891 "shikimate 5-dehydrogenase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 345 (126.5 bits), Expect = 7.9e-31, P = 7.9e-31
 Identities = 98/265 (36%), Positives = 135/265 (50%)

Query:   257 GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPH 314
             G+IG P+ HSKSP L+    K+ G NG ++ + V   D+A+  +T     F G + TIPH
Sbjct:    10 GVIGHPISHSKSPRLHGHWLKTYGINGHYIPMDVAPQDLAQVVRTLPKAGFVGVNITIPH 69

Query:   315 KEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG- 373
             KEA +   D++   A  IGAVN +I R+ DG++   NTD  G +  +  G  G    SG 
Sbjct:    70 KEAVMSVADQITDRATLIGAVNTLIFRE-DGRILADNTDGYGFMENLRAGAPGWDPKSGP 128

Query:   374 GVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLAD 433
              V     G    VI                   V++ NRT  RA +L +  G   +++AD
Sbjct:   129 AVVFGAGGAARAVISALAEAGVP---------EVIVTNRTRVRADKLKDDFG-QRVTVAD 178

Query:   434 -LENFNP-EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
              ++  N  ED  ++ NTTS+GM  K  E  +P   L   A+V D VY P  TRLL EAEE
Sbjct:   179 WVQAGNVIEDARLVVNTTSLGMIGK-PELRVPLDGLRADAVVTDLVYAPLKTRLLAEAEE 237

Query:   492 SGATIVSGLEMFIGQAYEQYERFTG 516
              G T V GL M + QA   +ER+ G
Sbjct:   238 MGCTTVDGLGMLLHQAVPGFERWFG 262

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

SGD|S000002534 ARO1 "Pentafunctional arom protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 372 (136.0 bits), Expect = 8.5e-31, P = 8.5e-31
 Identities = 130/500 (26%), Positives = 234/500 (46%)

Query:    49 GADLVEIRLDGLKNFNP---RENIKTLIKESP-VPTLFTYRPIWEGGQYDGDENERV-DV 103
             G + VE+R+D L N++     + +  L K +  +P +FT R + +GG +  +E + + ++
Sbjct:  1099 GCEAVEVRVDHLANYSADFVSKQLSILRKATDSIPIIFTVRTMKQGGNFPDEEFKTLREL 1158

Query:   104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLS--NLVAR 161
               +A++ G +++D+EL +  +    +  K+    K+I S H++Q   S +D    N   +
Sbjct:  1159 YDIALKNGVEFLDLELTLPTDIQYEVINKRGNT-KIIGSHHDFQGLYSWDDAEWENRFNQ 1217

Query:   162 IQASGADIVKFATTALDITDVARV--FQITVHSQVPIIGLVMGERGLISRILCAKFGGFL 219
                   D+VKF  TA++  D  R+  F+ T H   P+I + M  +G ISR+L       +
Sbjct:  1218 ALTLDVDVVKFVGTAVNFEDNLRLEHFRDT-HKNKPLIAVNMTSKGSISRVLNNVLTP-V 1275

Query:   220 TFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSV 279
             T   L N   +APGQ T+  +  +Y     G + K   ++GKP+GHS+SPIL+N  ++ +
Sbjct:  1276 TSDLLPNS--AAPGQLTVAQINKMYT-SMGGIEPKELFVVGKPIGHSRSPILHNTGYEIL 1332

Query:   280 GFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNC 337
             G    F     +   + K      + +F G + TIP K   ++  DE+   AK IGAVN 
Sbjct:  1333 GLPHKFDKFETESAQLVKEKLLDGNKNFGGAAVTIPLKLDIMQYMDELTDAAKVIGAVNT 1392

Query:   338 IIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXX 397
             +I    + K  G NTD++G  +A+         ++ GV   +     +VI          
Sbjct:  1393 VIPL-GNKKFKGDNTDWLGIRNAL---------INNGVPEYVGHTAGLVIGAGGTSRAAL 1442

Query:   398 XXXXXXX-XRVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSI 451
                      ++ I NRT  + + L E++          S   +E      G+ ++   + 
Sbjct:  1443 YALHSLGCKKIFIINRTTSKLKPLIESLPSEFNIIGIESTKSIEEIKEHVGVAVSCVPAD 1502

Query:   452 GMQPKVDE--TPIPKHAL--GHYALV---FDAVYTPKITRLLREAEESGAT-IVSGLEMF 503
               +P  DE  + + +  +   H A V    +A Y P +T ++  +++     +V G +M 
Sbjct:  1503 --KPLDDELLSKLERFLVKGAHAAFVPTLLEAAYKPSVTPVMTISQDKYQWHVVPGSQML 1560

Query:   504 IGQAYEQYERFTGLPGKMNA 523
             + Q   Q+E++TG  G   A
Sbjct:  1561 VHQGVAQFEKWTGFKGPFKA 1580

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA;IDA

GO:0004765 "shikimate kinase activity" evidence=IEA;IDA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA;IDA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA;IDA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016765 "transferase activity, transferring alkyl or aryl (other than methyl) groups" evidence=IEA

GO:0009423 "chorismate biosynthetic process" evidence=IEA;TAS

TIGR_CMR|CHY_0623 CHY_0623 "shikimate 5-dehydrogenase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 317 (116.6 bits), Expect = 9.5e-28, P = 9.5e-28
 Identities = 83/274 (30%), Positives = 142/274 (51%)

Query:   252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFS 309
             +TK+ GIIG P+ H+ SP ++NEAFK++  N +++ L V  + + +      + +F G +
Sbjct:     6 ETKLTGIIGYPLKHTLSPQMHNEAFKALNLNFLYLPLEVAEESLPQAIYGLKAFNFRGIN 65

Query:   310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
              TIP+KE      DEV T AK+IGAVN I+  +  G+L GYNTD  G + ++++      
Sbjct:    66 VTIPYKEKVFPFLDEVATEAKTIGAVNTIVHDR--GRLIGYNTDAPGFLLSLKEN----- 118

Query:   370 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG--- 426
             +V       + GK  +++                   ++IANRT D+A+ELA+   G   
Sbjct:   119 DVE------VTGKKVLLLGAGGAARAVAYALLTAGAELIIANRTIDKAKELAKDFQGVGK 172

Query:   427 --HALSLADLENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYALVFDAVYTPKIT 483
                 L L D +  +     +  NT  +GM P  ++ P +    +    + +D +Y P  T
Sbjct:   173 ISEILELGD-KPISLAPYHMAVNTLPLGMHPYENQMPAVDFTGVTSDFVAYDLIYNPAET 231

Query:   484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
             + L+ ++E GA  ++GL M + Q    +E++TG+
Sbjct:   232 KFLKASKEKGARTINGLSMLLWQGVLAFEKWTGV 265

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

POMBASE|SPAC1834.02 aro1 "pentafunctional aromatic polypeptide Aro1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 341 (125.1 bits), Expect = 2.4e-27, P = 2.4e-27
 Identities = 137/504 (27%), Positives = 228/504 (45%)

Query:    49 GADLVEIRLDGLKNFNPRENIKTL--IKE--------SPVPTLFTYRPIWEGGQYDGDEN 98
             G D +E+R+D LK+      I +L  + E        + +P +FT R I +GG +  D+ 
Sbjct:  1077 GCDAIEVRVDYLKDPKSSNGISSLDFVAEQISLLRCSTTLPIIFTIRTISQGGLFPNDKE 1136

Query:    99 ERVDVLRL-AMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
             E    L L AM  G D++DVEL  + E  + +   K    K+I+S H+   T S      
Sbjct:  1137 EEAKELMLSAMRYGCDFVDVELGWSSETINILYQHKGYT-KLIMSWHDLSGTWSWARPHE 1195

Query:   158 LVARIQ--ASGADIVKFATTALDITDVARV--FQ--ITVHSQVPIIGLVMGERGLISRIL 211
              + +++  +S AD++K    A ++ D   +  F+  IT    +P+I   MG  G +SRIL
Sbjct:  1196 WMQKVELASSYADVIKLVGMANNLNDNLELEEFRTRITNSMDIPLILFNMGRFGQLSRIL 1255

Query:   212 CAKFGGFLTFGTLENGIVSAPGQPTIKDLLDL-YNFRQMGPDTKVFGIIGKPVGHSKSPI 270
               KF   +T   L +   +APGQ T+K L +      ++ P+ K F + GKP+ HS+SPI
Sbjct:  1256 -NKFMTPVTHPLLPSK--AAPGQLTVKQLNEARVLIGEILPE-KFF-LFGKPIKHSRSPI 1310

Query:   271 LYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK 330
             L++ A++ +G    +     D + +  +  +  DF G + TIP+K + +K  DE+   A+
Sbjct:  1311 LHSTAYELLGLPHTYEAFETDTVDEVQKVLNLPDFGGANVTIPYKLSVMKFMDELSDEAR 1370

Query:   331 SIGAVNCIIRRQSDGKLF--GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIX 388
               GAVN II  +   KL   G NTD+ G      + L G   VS   ++ L     V+  
Sbjct:  1371 FFGAVNTIIPIRIGDKLVLRGDNTDWRGIYDTFANALDG---VSLRDTNGL-----VIGA 1422

Query:   389 XXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILAN 447
                              R+ + NRT   +  + +     + + + D +N   E+   +  
Sbjct:  1423 GGTSRAAIYSLHRLGVSRIYLLNRTLANSYRVQDVFPPDYNIHIIDSDNIPSEELSSVTL 1482

Query:   448 TTSIGMQPKVDETP-----IPKHALGHYA---LVFDAVYTPKITRLLREAEESGATIVSG 499
             +  +   P   E P     + K  L + A   +  D  Y P  T L+  A +      +G
Sbjct:  1483 SAVVSTIPADIELPEKVASVIKALLANKADGGVFLDMAYKPLHTPLMAVASDLEWKCCNG 1542

Query:   500 LEMFIGQAYEQYERFTGLPGKMNA 523
             LE  + Q    +  +TG+    +A
Sbjct:  1543 LEALVRQGLASFHLWTGMTAPFDA 1566

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA

GO:0004765 "shikimate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0009423 "chorismate biosynthetic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

TIGR_CMR|CBU_2075 CBU_2075 "3-dehydroquinate dehydratase, type I" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 313 (115.2 bits), Expect = 2.6e-27, P = 2.6e-27
 Identities = 72/225 (32%), Positives = 129/225 (57%)

Query:    22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTL 81
             N   ICV ++G+++++ +  + +A  +  D VE+R+D L+  NP   ++ +   +    +
Sbjct:     3 NTPRICVVVIGKTLEEFLSQL-EAAQTAVDFVELRIDYLEQINPNW-VRIIKNHTHKKAI 60

Query:    82 FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIV 141
                R   +GG++ G    + ++L+   +LG DY+D++L VA +   SI  KK    K+I+
Sbjct:    61 LCCRARADGGKFLGTPEAQQEILQAGNDLGFDYLDIDLPVANKI--SIHEKK---AKIII 115

Query:   142 SSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--VPIIGL 199
             S HN+ +TP + +L+ L+  ++    D+ KFAT +    DV  +F++ ++ +    +I L
Sbjct:   116 SYHNFLHTPPITELNFLLENMRLFNPDVFKFATKSEQYEDVKTLFKLLINKKNNENMIVL 175

Query:   200 VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
              MGE+G I R+L    GG+LTF ++ NG +SAPGQ   K + D Y
Sbjct:   176 GMGEQGKIIRLLSPLLGGYLTFSSI-NGAISAPGQIDFKTMQDFY 219

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=ISS

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=ISS

ASPGD|ASPL0000055969 aromA [Emericella nidulans (taxid:162425)]

 Score = 323 (118.8 bits), Expect = 2.4e-25, P = 2.4e-25
 Identities = 135/508 (26%), Positives = 218/508 (42%)

Query:    49 GADLVEIRLDGLK-----NFNPR-----ENIKTLIKESPVPTLFTYRPIWEGGQY-DGDE 97
             G+D VE+R+D LK     N  P      E +  L     +P +FT R   +GG++ D   
Sbjct:  1074 GSDAVELRVDLLKDPASNNDIPSVDYVVEQLSFLRSRVTLPIIFTIRTQSQGGRFPDNAH 1133

Query:    98 NERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSN 157
             +  +++ RLA   G +++D+E+    +   ++   K    K+I S H+ +   S  ++S 
Sbjct:  1134 DAALELYRLAFRSGCEFVDLEIAFPEDMLRAVTEMKGFS-KIIASHHDPKGELSWANMSW 1192

Query:   158 LVARIQA-SGADIVKFATTALDITD--VARVFQ---ITVHSQVPIIGLVMGERGLISRIL 211
             +    +A    DI+K    A +I D    R F+      H  VP+I + MG++G +SRIL
Sbjct:  1193 IKFYNKALEYGDIIKLVGVARNIDDNTALRKFKNWAAEAHD-VPLIAINMGDQGQLSRIL 1251

Query:   212 CAKFGGFLTFGTLEN-GIVSAPGQPTIKDLLDLYNFRQMGP-DTKVFGIIGKPVGHSKSP 269
                  GF+T  +  +    +APGQ +  ++        MG    K F I G P+  S+SP
Sbjct:  1252 ----NGFMTPVSHPSLPFKAAPGQLSATEIRK--GLSLMGEIKPKKFAIFGSPISQSRSP 1305

Query:   270 ILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA 329
              L+N  F  VG    +  L   +     +   S DF G S TIP K   +   DEV   A
Sbjct:  1306 ALHNTLFAQVGLPHNYTRLETTNAQDVQEFIRSPDFGGASVTIPLKLDIMPLLDEVAAEA 1365

Query:   330 KSIGAVNCIIR----RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFV 385
             + IGAVN II     + +  +L G NTD+ G I ++      +  V G           V
Sbjct:  1366 EIIGAVNTIIPVSTGKNTPSRLVGRNTDWQGMILSLR-----KAGVYGPKRKDQEQSALV 1420

Query:   386 VIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETV-GGHALSLADL-ENFN----- 438
             V                    + I  RT  +   +  T    + + + +   +F      
Sbjct:  1421 VGGGGTARAAIYALHNMGYSPIYIVGRTPSKLENMVSTFPSSYNIRIVESPSSFESVPHV 1480

Query:   439 -----PEDGMI--LANTTSIGMQPKVDETPIPK-HALGHYA-LVFDAVYTPKITRLLREA 489
                  P D  I      T   M  +  E       A+ H   ++ +  Y P++T L+R A
Sbjct:  1481 AIGTIPADQPIDPTMRETLCHMFERAQEADAEAVKAIEHAPRILLEMAYKPQVTALMRLA 1540

Query:   490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
              +SG   + GLE+ +GQ + Q++ +TG+
Sbjct:  1541 SDSGWKTIPGLEVLVGQGWYQFKYWTGI 1568

GO:0070403 "NAD+ binding" evidence=IPI

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IDA;RCA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=RCA;IDA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=RCA;IDA

GO:0004765 "shikimate kinase activity" evidence=RCA;IDA

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=RCA;IDA

GO:0009423 "chorismate biosynthetic process" evidence=IDA

GO:0003856 "3-dehydroquinate synthase activity" evidence=RCA

GO:0005737 "cytoplasm" evidence=IEA

TIGR_CMR|GSU_1490 GSU_1490 "shikimate 5-dehydrogenase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 294 (108.6 bits), Expect = 3.1e-25, P = 3.1e-25
 Identities = 86/275 (31%), Positives = 130/275 (47%)

Query:   253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
             T+V GIIG+PV HS SP++ N A +++G +  +V   V++  +A   +  ++    GF+ 
Sbjct:     7 TRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNV 66

Query:   311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
             TIPHK A +   D +   A+ IGA N + R  SD  L GYNTD  G I ++ + L     
Sbjct:    67 TIPHKSAILPLLDRLSPEAELIGAANVVKREGSD--LVGYNTDGTGFIQSLSEDL----- 119

Query:   371 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALS 430
                G + A   ++ V+                    VVIANR+  R  EL+     H + 
Sbjct:   120 ---GFTPA-GCRILVMGAGGAARAAVASLAGAGAASVVIANRSIARGEELSAAFRRHFIG 175

Query:   431 LA------DLENFNP--EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
                     D EN N   ++  +L NT+S+GM        +    +G +  V+D VY P +
Sbjct:   176 TQFAAIPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPG-MDLSRMGPHGAVYDMVYVPAV 234

Query:   483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
             T LL EAE  G    +G+ M   Q     E +TG+
Sbjct:   235 TPLLAEAERCGIRYANGIGMLAAQGECALELWTGV 269

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

CGD|CAL0004346 ARO1 [Candida albicans (taxid:5476)]

 Score = 319 (117.4 bits), Expect = 6.4e-25, P = 6.4e-25
 Identities = 129/538 (23%), Positives = 234/538 (43%)

Query:    13 KLVSGGMRKNPTL---ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR--- 66
             KL++G  R    +     V +    ++++V D+ ++   GAD VE+R+D  K+ +     
Sbjct:  1029 KLITGAERPVVPVGRSAAVVLTSPDLNEVVRDL-ESITIGADAVELRVDLFKDTSAEFVA 1087

Query:    67 ENIKTLIKESPVPTLFTYRPIWEGGQYDGDEN--ERVDVLRLAMELGADYIDVELQVARE 124
               I  + K + +P ++T R + +GG++  DEN  E   +L L + LG  Y+D++L    E
Sbjct:  1088 AQIAVIRKHADLPIIYTVRTMSQGGKFP-DENVDELKSLLLLGIRLGVAYVDLQLTAPNE 1146

Query:   125 FNDSIRGKKPEKCKVIVSSH--NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDV 182
               + I  KK    +VI +    N +   +  +  N   +  +  ADIV+    A  I D 
Sbjct:  1147 LIEEISSKKGFT-RVIGTYQDINGELKWNNVEWKNKYNQGVSMNADIVRLVGKANSIQDN 1205

Query:   183 ARVFQITVHSQV-PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQ-PTIKDL 240
               +      + + P+I   +G +G +S++L     G  TF  + + ++    +  TI +L
Sbjct:  1206 LDLENFKKQNTLKPLIAFNLGSQGKLSQVL----NG--TFTPISHKLLPNDEEFLTIGEL 1259

Query:   241 LDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTY 300
                Y F   G   K F +IG P+ HS+SP L+N  +K++     F      D+   +   
Sbjct:  1260 NQTY-FDIGGFTAKKFWVIGSPIEHSRSPNLHNAGYKALNLPYQFGRFEATDVDVVYDNL 1318

Query:   301 SSN-DFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS 359
              +  DF G + T+P K   +K   ++   A++IGAVN +I    +G  FG NTD+VG  +
Sbjct:  1319 INKPDFGGLAITMPLKLDIMKFATKLSDAAETIGAVNTLI--PIEGGYFGDNTDWVGISN 1376

Query:   360 AIEDGLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARE 419
             +          +  GV    +    VV                   ++ + NRT  +  E
Sbjct:  1377 SF---------IRAGVPPKSSSNGLVVGAGGTSRAAIYALHQMGCAKIYLVNRTAAKLEE 1427

Query:   420 LAETVG-GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK----------HALG 468
             L ++    + L + + E    +   +    + I     +D   + K           + G
Sbjct:  1428 LVKSFPKDYNLEIVETEQQADKASKVSLAVSCIPADKPLDGEVLKKIERILSNGSEQSAG 1487

Query:   469 HYALVFDAVYTPKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGLPGKMNAPH 525
                 + +A Y P++T +++ AEE     ++ G+EM + Q   Q++  TG        H
Sbjct:  1488 FKPTLLEASYKPRVTPIMKLAEEQYKWKVIPGVEMLVNQGDRQFKLHTGFTAPYEIIH 1545

GO:0005829 "cytosol" evidence=IEA

GO:0003866 "3-phosphoshikimate 1-carboxyvinyltransferase activity" evidence=IEA

GO:0003855 "3-dehydroquinate dehydratase activity" evidence=IEA

GO:0004765 "shikimate kinase activity" evidence=IEA

GO:0003856 "3-dehydroquinate synthase activity" evidence=IEA

GO:0004764 "shikimate 3-dehydrogenase (NADP+) activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SQT8	DHQSD_ARATH	1, ., 1, ., 1, ., 2, 5	0.7442	0.8425	0.8606	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
4th Layer	1.2.1.70	LOW CONFIDENCE prediction!
4th Layer	4.2.1.10	0.946
4th Layer	1.1.1.25	0.946
3rd Layer	4.2.1	0.963
3rd Layer	1.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	616
PLN02520	529	PLN02520, PLN02520, bifunctional 3-dehydroquinate	0.0
COG0169	283	COG0169, AroE, Shikimate 5-dehydrogenase [Amino ac	3e-83
pfam01487	222	pfam01487, DHquinase_I, Type I 3-dehydroquinase	9e-82
PRK00258	278	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewe	2e-81
TIGR01093	228	TIGR01093, aroD, 3-dehydroquinate dehydratase, typ	4e-71
cd00502	225	cd00502, DHQase_I, Type I 3-dehydroquinase, (3-deh	8e-64
TIGR00507	270	TIGR00507, aroE, shikimate 5-dehydrogenase	4e-58
COG0710	231	COG0710, AroD, 3-dehydroquinate dehydratase [Amino	1e-51
PRK09310	477	PRK09310, aroDE, bifunctional 3-dehydroquinate deh	1e-50
PRK12548	289	PRK12548, PRK12548, shikimate 5-dehydrogenase; Pro	4e-45
cd01065	155	cd01065, NAD_bind_Shikimate_DH, NAD(P) binding dom	1e-43
PRK02412	253	PRK02412, aroD, 3-dehydroquinate dehydratase; Prov	4e-40
TIGR01809	282	TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase	2e-32
PRK12549	284	PRK12549, PRK12549, shikimate 5-dehydrogenase; Rev	6e-31
PRK12749	288	PRK12749, PRK12749, quinate/shikimate dehydrogenas	4e-29
pfam08501	83	pfam08501, Shikimate_dh_N, Shikimate dehydrogenase	6e-28
PRK12550	272	PRK12550, PRK12550, shikimate 5-dehydrogenase; Rev	1e-26
PRK13575	238	PRK13575, PRK13575, 3-dehydroquinate dehydratase;	6e-25
PRK14027	283	PRK14027, PRK14027, quinate/shikimate dehydrogenas	1e-19
pfam01488	133	pfam01488, Shikimate_DH, Shikimate / quinate 5-deh	2e-15
PRK00045	423	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	5e-11
cd05213	311	cd05213, NAD_bind_Glutamyl_tRNA_reduct, NADP-bindi	1e-09
COG0373	414	COG0373, HemA, Glutamyl-tRNA reductase [Coenzyme m	7e-09
TIGR01035	417	TIGR01035, hemA, glutamyl-tRNA reductase	3e-07
PRK13576	216	PRK13576, PRK13576, 3-dehydroquinate dehydratase;	2e-06
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-05
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-05
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	9e-05
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-04
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-04
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
pfam03435	380	pfam03435, Saccharop_dh, Saccharopine dehydrogenas	3e-04
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-04
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	5e-04
pfam03807	93	pfam03807, F420_oxidored, NADP oxidoreductase coen	6e-04
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	7e-04
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
smart01002	149	smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT	0.001
cd05305	359	cd05305, L-AlaDH, Alanine dehydrogenase NAD-bindin	0.002
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	0.003
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	0.003
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	0.003
smart00997	162	smart00997, AdoHcyase_NAD, S-adenosyl-L-homocystei	0.004

>gnl|CDD|178135 PLN02520, PLN02520, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

 Score = 1015 bits (2625), Expect = 0.0
 Identities = 421/516 (81%), Positives = 460/516 (89%), Gaps = 1/516 (0%)

Query: 3   SPNLLVASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN 62
                +AS     SGG+R+NPTLICVPIM +SVDKM+++M KA   GADLVEIRLD LKN
Sbjct: 2   VSTASLASDDLQGSGGVRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKN 61

Query: 63  FNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVA 122
           FNPRE++KTLIK+SP+PTL TYRP WEGGQY+GDEN+R D LRLAMELGADY+DVEL+VA
Sbjct: 62  FNPREDLKTLIKQSPLPTLVTYRPKWEGGQYEGDENKRQDALRLAMELGADYVDVELKVA 121

Query: 123 REFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDV 182
            EF +SI GKKPEKCKVIVSSHNY+ TPSVE+L NLVARIQA+GADIVK ATTALDITDV
Sbjct: 122 HEFINSISGKKPEKCKVIVSSHNYENTPSVEELGNLVARIQATGADIVKIATTALDITDV 181

Query: 183 ARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLD 242
           AR+FQITVHSQVP IGLVMGERGLISRILC KFGG+LTFGTLE G VSAPGQPTIKDLLD
Sbjct: 182 ARMFQITVHSQVPTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKDLLD 241

Query: 243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSS 302
           LYNFRQ+GPDTKV+GIIGKPVGHSKSPIL+NEAFKSVGFNGV+VHLLVDD+AKF QTYSS
Sbjct: 242 LYNFRQIGPDTKVYGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQTYSS 301

Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
            DFAGFSCTIPHKE A+KCCDEVD +AKSIGA+N IIRR SDGKL GYNTDY+GAISAIE
Sbjct: 302 PDFAGFSCTIPHKEDALKCCDEVDPIAKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIE 361

Query: 363 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE 422
           DGLR     S    S LAGKLFVVIGAGGAGKALAYGAK KGARVVIANRTY+RA+ELA+
Sbjct: 362 DGLRA-SGSSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELAD 420

Query: 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI 482
            VGG AL+LADLENF+PE+GMILANTTS+GMQP VDETPI KHAL HY+LVFDAVYTPKI
Sbjct: 421 AVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKI 480

Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
           TRLLREAEESGA IVSG EMFI QAYEQ+ERFTGLP
Sbjct: 481 TRLLREAEESGAIIVSGTEMFIRQAYEQFERFTGLP 516

Length = 529

>gnl|CDD|223247 COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

 Score =  262 bits (672), Expect = 3e-83
 Identities = 108/277 (38%), Positives = 160/277 (57%), Gaps = 20/277 (7%)

Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           M   TK+FG+IG P+ HS SP ++N AF+++G + V++   V  +D+ +      +  F 
Sbjct: 2   MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFR 61

Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           G + TIP KEAA+   DE+   A+ IGAVN ++R   DGKL GYNTD +G + A+++   
Sbjct: 62  GLNVTIPFKEAALPLLDELSPRARLIGAVNTLVRE-DDGKLRGYNTDGIGFLRALKEF-- 118

Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVG 425
                  G+   + GK  +++GAGGA +A+A+  A+A   R+ + NRT +RA ELA+  G
Sbjct: 119 -------GLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171

Query: 426 -----GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
                  A +LADLE     D  +L N T +GM     ++P+P   L   A+V+D VY P
Sbjct: 172 ELGAAVEAAALADLEGLEEAD--LLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP 229

Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
             T LLREA   GA  + GL M + QA E +E +TG+
Sbjct: 230 LETPLLREARAQGAKTIDGLGMLVHQAAEAFELWTGV 266

Length = 283

>gnl|CDD|216526 pfam01487, DHquinase_I, Type I 3-dehydroquinase

 Score =  256 bits (656), Expect = 9e-82
 Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 9/225 (4%)

Query: 27  CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFT 83
           CVP+ G S+++ + ++ +    GAD VE+RLD L++ +     E +  L +++ +P +FT
Sbjct: 1   CVPVTGPSLEEALAELEEL-EEGADAVELRLDLLEDVDAEDVSEQLSALREKTGLPIIFT 59

Query: 84  YRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSS 143
            R   EGG++DG E E +++L+ A+ LG DYID+EL  A +   ++   K    K+I+S 
Sbjct: 60  VRTKSEGGRFDGSEEEYLELLKEALRLGPDYIDIELSSAPDELLAVIIAKKGGTKIILSY 119

Query: 144 HNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ---VPIIGLV 200
           H+++ TPS EDL +L   +Q  GADIVK A  A  I DV R+ + T  ++    P+I + 
Sbjct: 120 HDFEGTPSWEDLLSLYEEMQKLGADIVKIAVMANSIEDVLRLLRFTSEAKELDKPLIAIS 179

Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
           MGE G ISRIL   FG  LT+ +L     SAPGQ T+++L +   
Sbjct: 180 MGELGRISRILGPVFGSVLTYASLGK--ASAPGQITLEELREALE 222

Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase.) catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate giving dehydroshikimate. Dehydroquinase functions in the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Type II 3-dehydroquinase catalyzes the trans-dehydration of 3-dehydroshikimate see pfam01220. Length = 222

>gnl|CDD|234703 PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed

 Score =  257 bits (659), Expect = 2e-81
 Identities = 94/270 (34%), Positives = 146/270 (54%), Gaps = 16/270 (5%)

Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
           T+++ +IG P+ HSKSP+++N AFK +G +GV++ +LV  +D+    + + +    G + 
Sbjct: 5   TRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANV 64

Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
           T+P KEAA    DE+   A+ IGAVN ++    DG+L G NTD +G + A+E+ L     
Sbjct: 65  TVPFKEAAFALADELSERARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----- 117

Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
                   L GK  +++GAGGA +A+         A + I NRT +RA ELA+  G    
Sbjct: 118 -----GVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK 172

Query: 430 SLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE 488
           +  DLE         ++ N TS GM  ++   P+P   L    +V+D +Y P  T  L  
Sbjct: 173 AELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAW 232

Query: 489 AEESGATIVSGLEMFIGQAYEQYERFTGLP 518
           A+  GA  + GL M + QA E +E +TG+ 
Sbjct: 233 AKAQGARTIDGLGMLVHQAAEAFELWTGVR 262

Length = 278

>gnl|CDD|233268 TIGR01093, aroD, 3-dehydroquinate dehydratase, type I

 Score =  228 bits (584), Expect = 4e-71
 Identities = 84/231 (36%), Positives = 129/231 (55%), Gaps = 14/231 (6%)

Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVP 79
            I VP+    +++ +    K    GAD+VE+R+D LK+ +   ++  LI++        P
Sbjct: 1   KIFVPLTAPDLEEALATAEKIC-KGADIVELRVDLLKDPSSNNDVDALIEQLSQLRPDKP 59

Query: 80  TLFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREF-NDSIRGKKPEKC 137
            +FT R I EGG++ G+E E ++ L R A   G D++D+EL +  +   + I   K    
Sbjct: 60  LIFTIRTISEGGKFPGNEEEYLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGT 119

Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ---- 193
           K+I+S H++Q TPS E++   + +  + GADIVK A  A    DV  + +IT        
Sbjct: 120 KIIMSYHDFQKTPSWEEIVERLEKALSYGADIVKIAVMANSKEDVLTLLEITNKVDEHAD 179

Query: 194 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY 244
           VP+I + MG+RG ISR+L A FG  LTFG+L     SAPGQ ++ DL +L 
Sbjct: 180 VPLITMSMGDRGKISRVLGAVFGSVLTFGSLGK--ASAPGQISVDDLRELL 228

This model detects 3-dehydroquinate dehydratase, type I, either as a monofunctional protein or as a domain of a larger, multifunctional protein. It is often found fused to shikimate 5-dehydrogenase (EC 1.1.1.25), and sometimes additional domains. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by the model TIGR01088 [Amino acid biosynthesis, Aromatic amino acid family]. Length = 228

>gnl|CDD|188633 cd00502, DHQase_I, Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase)

 Score =  209 bits (534), Expect = 8e-64
 Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 15/231 (6%)

Query: 25  LICVPIMGESVDKMVVDMGKA--NASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVP 79
            ICVP+ G     ++ +         GAD VE+R+D L++ +     E +  L + +P+P
Sbjct: 1   KICVPLTG---PDLLEEALSLLELLLGADAVELRVDLLEDPSIDDVAEQLSLLRELTPLP 57

Query: 80  TLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
            +FT R   EGG ++G E E +++L  A++LG DY+D+EL  A    + I  +K    K+
Sbjct: 58  IIFTVRTKSEGGNFEGSEEEYLELLEEALKLGPDYVDIELDSAL-LEELINSRKKGNTKI 116

Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV----HSQVP 195
           I S H++  TPS E+L + + ++ A GADIVK A  A  I D  R+ + T        +P
Sbjct: 117 IGSYHDFSGTPSDEELVSRLEKMAALGADIVKIAVMANSIEDNLRLLKFTRQVKNLYDIP 176

Query: 196 IIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
           +I + MGE G +SRIL   FG  LT+ +L     SAPGQ ++++L    + 
Sbjct: 177 LIAINMGELGKLSRILSPVFGSPLTYASLPE--PSAPGQLSVEELKQALSL 225

Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase). Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism. Length = 225

>gnl|CDD|161904 TIGR00507, aroE, shikimate 5-dehydrogenase

 Score =  195 bits (498), Expect = 4e-58
 Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
           K++G+IG P+ HSKSP+++N  FK +G  G ++  LV  DD+      + +  F G + T
Sbjct: 1   KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVT 60

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            P KE A +  DE+D  AK  GAVN ++    DGKL GYNTD +G +S +E  +  R N 
Sbjct: 61  SPFKERAFQFLDEIDGRAKLAGAVNTLVLE--DGKLVGYNTDGIGLVSDLEQLIPLRPN- 117

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE----TVGGH 427
                     +  ++IGAGGA KA+A         V+IANRT  +A ELAE         
Sbjct: 118 ----------QNVLIIGAGGAAKAVALELLKADCNVIIANRTVSKAEELAERFQRYGEIQ 167

Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
           A S+ +L         ++ N TS GM   +DE P+P   L    LV+D VY P  T  L 
Sbjct: 168 AFSMDELP---LHRVDLIINATSAGMSGNIDEPPVPAEYLKEGKLVYDLVYNPLETPFLA 224

Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTG 516
           EA+  G   + GL M + QA   +E +TG
Sbjct: 225 EAKSLGTKTIDGLGMLVYQAALSFELWTG 253

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain [Amino acid biosynthesis, Aromatic amino acid family]. Length = 270

>gnl|CDD|223782 COG0710, AroD, 3-dehydroquinate dehydratase [Amino acid transport and metabolism]

 Score =  177 bits (450), Expect = 1e-51
 Identities = 75/223 (33%), Positives = 125/223 (56%), Gaps = 9/223 (4%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKN-FNPRENIKTLIKESPV-PTL 81
             I VP++G  + ++     K+    AD+VE+R+D L++     E  K L ++ P  P +
Sbjct: 2   PKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLI 61

Query: 82  FTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           FT+R + EGG++ G E E +++L+ LA   G DYID+EL    +    I  K  +K  VI
Sbjct: 62  FTFRTVKEGGEFPGSEEEYIELLKKLAELNGPDYIDIELSSPEDDVKEII-KFAKKHGVI 120

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQV---PII 197
           VS H+++ TP +E++   + ++++ GADIVK A       DV  + + T   +    P+I
Sbjct: 121 VSYHDFEKTPPLEEIIERLDKMESLGADIVKIAVMPQSKEDVLDLLEATREFKEAEKPVI 180

Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
            + MG+ G ISR+    FG  +T+ +L+    SAPGQ ++ +L
Sbjct: 181 TISMGKTGKISRVAGPVFGSPITYASLDK--PSAPGQISVDEL 221

Length = 231

>gnl|CDD|137204 PRK09310, aroDE, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

 Score =  181 bits (462), Expect = 1e-50
 Identities = 137/463 (29%), Positives = 209/463 (45%), Gaps = 40/463 (8%)

Query: 51  DLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
           D +E+R+D L + +  E +K LI+ +P+P L T++      Q    +     +  LA +L
Sbjct: 26  DCIELRVDLLLSLSDLE-LKKLIELAPIPIL-TWKKHESCSQAAWIDK----MQSLA-KL 78

Query: 111 GADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV 170
             +Y+D++    +E    IR   P K K+I+S H    T   ED+  L   + AS AD  
Sbjct: 79  NPNYLDIDKDFPKEALIRIRKLHP-KIKIILSYH----TSEHEDIIQLYNEMLASAADYY 133

Query: 171 KFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVS 230
           K A ++   TD+  +             L MG  G  SRIL         +         
Sbjct: 134 KIAVSSSSSTDLLNIIHQKRSLPENTTVLCMGGMGRPSRILSPLLQNAFNYAAGIGAPPV 193

Query: 231 APGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV 290
           APGQ +++ LL  YN+  +   + ++G+IG PV  S S + +N  F  +  N  ++ L +
Sbjct: 194 APGQLSLEHLL-FYNYANLSAQSPIYGLIGDPVDRSISHLSHNPLFSQLSLNCPYIKLPL 252

Query: 291 D--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLF 348
              ++ KFF T     F G S T+P K A +   D++D   K  G+ N ++ R   GK+ 
Sbjct: 253 TPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLVFRN--GKIE 310

Query: 349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV 408
           GYNTD  G  S ++     + N+       L  +   ++GAGGA KA+A      GA ++
Sbjct: 311 GYNTDGEGLFSLLK-----QKNIP------LNNQHVAIVGAGGAAKAIATTLARAGAELL 359

Query: 409 IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 468
           I NRT   A  LA    G A  L  L   +  D +I        + P V    IPK    
Sbjct: 360 IFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINC------LPPSVT---IPK---A 407

Query: 469 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQY 511
               V D    PK +   + A   G++I+ G EMF  QA  Q+
Sbjct: 408 FPPCVVDINTLPKHSPYTQYARSQGSSIIYGYEMFAEQALLQF 450

Length = 477

>gnl|CDD|183585 PRK12548, PRK12548, shikimate 5-dehydrogenase; Provisional

 Score =  161 bits (409), Expect = 4e-45
 Identities = 97/281 (34%), Positives = 138/281 (49%), Gaps = 29/281 (10%)

Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
           T + G+IG PVGHS SP +YN +F+  G +  ++   + VD +    +   + +  G + 
Sbjct: 9   TGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANV 68

Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
           T+P K  A K  DE+   A+ IGAVN I+    DGKL G+ TD +G +  + +       
Sbjct: 69  TMPCKSEAAKYMDELSPAARIIGAVNTIV--NDDGKLTGHITDGLGFVRNLREH------ 120

Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRT---YDRARELAETVGG 426
              GV   + GK   VIGAGGA  A+       GA+ + I N     Y+RA + AE +  
Sbjct: 121 ---GVD--VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ 175

Query: 427 -------HALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DA 476
                  +   L D E    E     IL N T +GM+P   ET I   ++    LV  D 
Sbjct: 176 EVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADT 235

Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
           VY PK T+LL +AE +G   V GL M + Q  E Y+ +TG 
Sbjct: 236 VYNPKKTKLLEDAEAAGCKTVGGLGMLLWQGAEAYKLYTGK 276

Length = 289

>gnl|CDD|133443 cd01065, NAD_bind_Shikimate_DH, NAD(P) binding domain of Shikimate dehydrogenase

 Score =  152 bits (387), Expect = 1e-43
 Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 16/168 (9%)

Query: 352 TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIA 410
           TD +G + A+E+               L GK  +++GAGGA +A+AY     GA ++VI 
Sbjct: 1   TDGLGFVRALEEAGIE-----------LKGKKVLILGAGGAARAVAYALAELGAAKIVIV 49

Query: 411 NRTYDRARELAETVG--GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG 468
           NRT ++A+ LAE  G  G A++  DLE     +  ++ NTT +GM+P  DE P+P   L 
Sbjct: 50  NRTLEKAKALAERFGELGIAIAYLDLEEL-LAEADLIINTTPVGMKP-GDELPLPPSLLK 107

Query: 469 HYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
              +V+D VY P  T LL+EA   GA  + GLEM + QA E +E +TG
Sbjct: 108 PGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQAAEAFELWTG 155

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DHs, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 155

>gnl|CDD|235036 PRK02412, aroD, 3-dehydroquinate dehydratase; Provisional

 Score =  146 bits (371), Expect = 4e-40
 Identities = 67/229 (29%), Positives = 119/229 (51%), Gaps = 14/229 (6%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             I VPIMG+++++++ +    +   AD++E R D L+  +  E++           +  
Sbjct: 16  PKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGK 75

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELGA-DYIDVELQVARE-FNDSIRGKKPEK 136
           P LFT+R   EGG+    + E + +++  ++ G  DYIDVEL   ++   + +       
Sbjct: 76  PLLFTFRTAKEGGEIALSDEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHG 135

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH----- 191
            KV++S H+++ TP  E++   + ++++ GADIVK A       DV  +   T       
Sbjct: 136 VKVVLSYHDFEKTPPKEEIVERLRKMESLGADIVKIAVMPQSEQDVLTLLNATREMKELY 195

Query: 192 SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
           +  P+I + MG+ G ISR+    FG   TF +L+    SAPGQ +++DL
Sbjct: 196 ADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDK--ASAPGQISVEDL 242

Length = 253

>gnl|CDD|233580 TIGR01809, Shik-DH-AROM, shikimate-5-dehydrogenase, fungal AROM-type

 Score =  126 bits (317), Expect = 2e-32
 Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 24/283 (8%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSN--DFAGFSCT 311
           K   IIGKP+ HS+SP L+N  ++ +G              +  +  S     F G S T
Sbjct: 6   KKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGFGPQFGGASVT 65

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
           IP K A ++  DE    A  IG+VN ++R Q +G   G NTD+ G   A+          
Sbjct: 66  IPLKFAILRFADEHTDRASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGAL---------A 115

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAET-VGGHAL 429
           + G    LAG   +VIGAGG  +A  Y   + G   + + NR  D+   L +  V    +
Sbjct: 116 NIGKFEPLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI 175

Query: 430 ----SLADLENFNPEDGMILANT--TSIGMQPKVDETPIPKHALGHYALV---FDAVYTP 480
                 +       +   +L +T    +          +P   L   +      DA Y P
Sbjct: 176 TRLEGDSGGLAIE-KAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDP 234

Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
             T L+     +G  ++SGL+M + Q + Q+E++TG+P    A
Sbjct: 235 WPTPLVAIVSAAGWRVISGLQMLLHQGFAQFEQWTGMPAPREA 277

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway [Amino acid biosynthesis, Aromatic amino acid family]. Length = 282

>gnl|CDD|183586 PRK12549, PRK12549, shikimate 5-dehydrogenase; Reviewed

 Score =  121 bits (307), Expect = 6e-31
 Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 45/290 (15%)

Query: 257 GIIGKPVGHSKSPILYNEAFKSVGFNGVF-------VHLLVDDIAKFFQTYSSNDFAGFS 309
           G+IG  +  S SP ++     + G   V+       + L  D + +         FAG +
Sbjct: 9   GLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLN 68

Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL---- 365
            T P K+A +   DE+   A+++GAVN ++ R  DG+  G+NTD+ G   +   GL    
Sbjct: 69  ITHPCKQAVIPHLDELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGLPDAS 126

Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETV 424
             R+               V +GAGGAG A+A+     G  R+ I +    RA  LA+ +
Sbjct: 127 LERV---------------VQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL 171

Query: 425 GGH-----ALSLADLENFNPE-DGMILANTTSIGMQPKVDETPIPKHAL--GHYALVFDA 476
                   A + +DL       DG++  + T  GM  K    P+P   L  G +  V D 
Sbjct: 172 NARFPAARATAGSDLAAALAAADGLV--HATPTGM-AKHPGLPLPAELLRPGLW--VADI 226

Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL---PGKMNA 523
           VY P  T LLR A   G   + G  M + QA + +E FTG      +M A
Sbjct: 227 VYFPLETELLRAARALGCRTLDGGGMAVFQAVDAFELFTGREPDAERMLA 276

Length = 284

>gnl|CDD|183721 PRK12749, PRK12749, quinate/shikimate dehydrogenase; Reviewed

 Score =  117 bits (293), Expect = 4e-29
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           ++ G++  P+ HS SP + N+A +  G    ++   VD+       +   +    G   +
Sbjct: 8   ELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVS 67

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
           +P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++        
Sbjct: 68  MPNKQLACEYVDELTPAAKLVGAINTIV--NDDGYLRGYNTDGTGHIRAIKE-------- 117

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT---YDRARELAETVGGH 427
           SG     + GK  V++GAGGA  A+      +G + + + NR    +D+A   A+ V  +
Sbjct: 118 SG---FDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN 174

Query: 428 A------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-VFDAVY 478
                    LAD + F        IL N T +GM+P  +E+ +   +L H  L V + VY
Sbjct: 175 TDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY 234

Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
            P +T+LL++A+++G   + G  M + Q  EQ+  +TG
Sbjct: 235 NPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTG 272

Length = 288

>gnl|CDD|149523 pfam08501, Shikimate_dh_N, Shikimate dehydrogenase substrate binding domain

 Score =  106 bits (268), Expect = 6e-28
 Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 2/83 (2%)

Query: 258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHK 315
           +IG P+ HS SP+++N AFK++G NGV+V   V  D++ +F +   +  F G + TIPHK
Sbjct: 1   LIGNPISHSLSPLIHNAAFKALGLNGVYVAFEVPPDNLPEFVEGLRALGFRGLNVTIPHK 60

Query: 316 EAAVKCCDEVDTVAKSIGAVNCI 338
           EAA+   DE+   AK IGAVN I
Sbjct: 61  EAAIPLLDELSPEAKRIGAVNTI 83

This domain is the substrate binding domain of shikimate dehydrogenase. Length = 83

>gnl|CDD|183587 PRK12550, PRK12550, shikimate 5-dehydrogenase; Reviewed

 Score =  109 bits (274), Expect = 1e-26
 Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 24/214 (11%)

Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           G + ++P KEA +   DE+D  A++I +VN I+   +DG L  YNTDY+    AI   L 
Sbjct: 62  GCAVSMPFKEAVIPLVDELDPSAQAIESVNTIV--NTDGHLKAYNTDYI----AIAKLLA 115

Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVG 425
                S  V   L      + G+GG  KA+A   +  G     I  R     + LAE  G
Sbjct: 116 -----SYQVPPDLV---VALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG 167

Query: 426 -GHALSLADLENFNPEDGMILANTTSIGMQ--PKVDETPIPKHALGHYALVFDAVYTPKI 482
                   DL     +   IL N T IGM   P+ D+   P+  +   ++VFD V  P  
Sbjct: 168 YEWR---PDLGGIEAD---ILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAE 221

Query: 483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           T L+R A   G T+++G E+   QA EQ+  +TG
Sbjct: 222 TPLIRYARARGKTVITGAEVIALQAVEQFVLYTG 255

Length = 272

>gnl|CDD|184156 PRK13575, PRK13575, 3-dehydroquinate dehydratase; Provisional

 Score =  103 bits (258), Expect = 6e-25
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 18/228 (7%)

Query: 33  ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTL-IKESPVPTLFTYRPIW 88
            S+++ ++          D++E+R+D  +N       E I  L + +     L TYR   
Sbjct: 14  LSIEETLIQKINHRIDAIDIIELRIDQWENVTVDQLAEMITKLKVLQDSFKLLVTYRTKL 73

Query: 89  EGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFN---DSIRGKKPEKCKVIVSSH 144
           +GG      +  +++L  LA   G D ID+E Q   +       I   +    +V++S H
Sbjct: 74  QGGYGQFTNDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHH 133

Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQI------TVHSQVPIIG 198
           N++ TP +++L  +  ++Q    + VK A    +  DV  + Q       T+  +V  +G
Sbjct: 134 NFESTPPLDELKFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKV--VG 191

Query: 199 LVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
           + M + GLISR     FGG L++G +  G   APGQ  + DL      
Sbjct: 192 ISMSKLGLISRTAQGVFGGALSYGCI--GEPQAPGQIHVTDLKAQVTL 237

Length = 238

>gnl|CDD|172521 PRK14027, PRK14027, quinate/shikimate dehydrogenase; Provisional

 Score = 88.9 bits (220), Expect = 1e-19
 Identities = 81/282 (28%), Positives = 122/282 (43%), Gaps = 31/282 (10%)

Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVD-----DIAKFFQTYSSND 304
           D+ + G+IG+ +  S++P ++     + G   V+  +  L       D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62

Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
           F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFGRGMEEG 121

Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAET 423
           L      S            V +GAGG G A+AY     G  ++ +A+    RA+ LA+ 
Sbjct: 122 LPNAKLDS-----------VVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170

Query: 424 ----VGGHALSLADL----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD 475
               VG  A+   D     +     DG++  N T +GM P    T      L     V D
Sbjct: 171 INNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKDHWVGD 227

Query: 476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
            VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 228 VVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 269

Length = 283

>gnl|CDD|216527 pfam01488, Shikimate_DH, Shikimate / quinate 5-dehydrogenase

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGG--HALSLADLE 435
           L GK  ++IGAG   +  A    +KGA+ + IANRT ++A+ELAE       AL L +LE
Sbjct: 10  LKGKKVLLIGAGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFPVGGEALPLDELE 69

Query: 436 NFNPE-DGMILANTTSIGMQP 455
               E D  I+ + TS     
Sbjct: 70  ELLAEAD--IVISATSAPTPI 88

This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyzes the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyzes the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate. Length = 133

>gnl|CDD|234592 PRK00045, hemA, glutamyl-tRNA reductase; Reviewed

 Score = 64.4 bits (158), Expect = 5e-11
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 14/78 (17%)

Query: 372 SGGVSSA-----LAGKLF--------VVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRA 417
           +G VS A     LA ++F        +VIGAG  G+ +A     KG R + +ANRT +RA
Sbjct: 160 AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERA 219

Query: 418 RELAETVGGHALSLADLE 435
            ELAE  GG A+ L +L 
Sbjct: 220 EELAEEFGGEAIPLDELP 237

Length = 423

>gnl|CDD|133452 cd05213, NAD_bind_Glutamyl_tRNA_reduct, NADP-binding domain of glutamyl-tRNA reductase

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 379 LAGKLFVVIGAGGAG-KALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
           L GK  +VIGAG  G  A  + A    A + IANRTY+RA ELA+ +GG+A+ L +L 
Sbjct: 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELL 233

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 311

>gnl|CDD|223450 COG0373, HemA, Glutamyl-tRNA reductase [Coenzyme metabolism]

 Score = 57.6 bits (140), Expect = 7e-09
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 379 LAGKLFVVIGAGGAG-KALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
           L  K  +VIGAG  G     + A+    ++ IANRT +RA ELA+ +G  A++L +L   
Sbjct: 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235

Query: 438 -NPEDGMILA 446
               D +I +
Sbjct: 236 LAEADVVISS 245

Length = 414

>gnl|CDD|233242 TIGR01035, hemA, glutamyl-tRNA reductase

 Score = 52.8 bits (127), Expect = 3e-07
 Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENF 437
           L GK  ++IGAG  G+ +A     KG  +++IANRTY+RA +LA+ +GG A+   DLE +
Sbjct: 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEY 237

Query: 438 NPEDGMILANTTS 450
             E  +++++T +
Sbjct: 238 LAEADIVISSTGA 250

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 417

>gnl|CDD|237433 PRK13576, PRK13576, 3-dehydroquinate dehydratase; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 46  NASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR 105
           N   ADL+E+RLD LK+      I+ L K      + T R   EGG  + D+  ++ +L+
Sbjct: 22  NFLDADLIELRLDYLKDR-EVSVIEFLDKYKD-KLIVTLRDKAEGGINELDDELKISLLK 79

Query: 106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS 165
              +    Y DVE    +++N     K       IVS H + Y P+ E++  +V++    
Sbjct: 80  ELYDKQFLY-DVEASFLQKYNVPYDNK-------IVSIHYFDYLPTSEEVKEIVSKFYEK 131

Query: 166 GADIVKFATTALD 178
            A  VK A   L 
Sbjct: 132 -AFSVKIAVLGLK 143

Length = 216

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L GK+ +V GAG G G A A     +GARVV+A+     A+ +   + G AL+L 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALR 55

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
           L GK+ VV G G G G+ LA  A   GA VV+A RT +R  E+A  +   G  AL++ 
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVP 60

Length = 258

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 44.1 bits (104), Expect = 9e-05
 Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELA---ETVGGHALSL 431
           L GK+ +V GA  G G+A A    A+GA V IA R  DR   LA   E  GG AL L
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVL 57

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 43.7 bits (104), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 379 LAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
           L GK+ V+ G GG  G A+A      GA+V I +R  ++A  +   +   GG AL++ 
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVK 65

Length = 278

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 6/63 (9%)

Query: 380 AGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRT---YDRARELAETVGGHALSL-ADL 434
           AGK+ VV GA  G G+ +A  A A+GARVV+ +R+   ++ A EL    GG AL+L ADL
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAA-GGEALALTADL 65

Query: 435 ENF 437
           E +
Sbjct: 66  ETY 68

Length = 260

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 382 KLFVVIGAG-GAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHALSL-ADLENFN 438
           +  +V G   G G A+A     +GARVV+  +++ D A  LA+ +G  A++L AD+ +  
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDRE 65

Query: 439 PEDGMILANTTSIG 452
               M    T   G
Sbjct: 66  QVQAMFATATEHFG 79

Length = 253

>gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase

 Score = 43.4 bits (103), Expect = 3e-04
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 384 FVVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPED- 441
            ++IGAGG G+ +A   A+     + +A+R+ ++A+ LA    G       ++  N E  
Sbjct: 1   VLIIGAGGVGQGVAPLLARHGDLEITVADRSLEKAQALAAPKLGLRFIAIAVDADNYEAL 60

Query: 442 -GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSG 499
             ++      I + P      + K  +       D  Y       L  +A+++G T V G
Sbjct: 61  VALLKEGDLVINLAPPFLSLTVLKACIETGVHYVDTSYLREAQLALHEKAKDAGVTAVLG 120

This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
            G   +V+GAGG G   A  AKA GARV++ +R+ ++  ELA+ +G   
Sbjct: 134 PGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEK-LELAKELGADH 181

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 5e-04
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
           G   ++LAGK+ VV GA  G G  LA    A+GA++ + +        LA  +GG  
Sbjct: 1   GPPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD 57

Length = 296

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 42.9 bits (102), Expect = 5e-04
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 379 LAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETVGG--HALSLA 432
           LAGK+ +V GA G  GKA A    A+GA VV+A+   + A   A  +GG   AL +A
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVA 476

Length = 681

>gnl|CDD|202773 pfam03807, F420_oxidored, NADP oxidoreductase coenzyme F420-dependent

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 386 VIGAGGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG 425
           +IGAG  G+ALA G  A G  VVIAN R  ++A  LAE +G
Sbjct: 4   IIGAGNMGEALARGLAAAGHEVVIANSRNPEKAAALAEELG 44

Length = 93

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 7e-04
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 19/99 (19%)

Query: 379 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL------ 431
           L GK+ ++ G A G G+A+A    A+GARVVIA+    RAR  A  +G  A+++      
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63

Query: 432 ---------ADLENFNPEDGMILANTTSI-GMQPKVDET 460
                    A +E F   D  IL N  ++  M P +D +
Sbjct: 64  QDSIDRIVAAAVERFGGID--ILFNNAALFDMAPILDIS 100

Length = 257

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.0 bits (97), Expect = 0.001
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHALSLA 432
           L GK+ +V GA  G G+ +A    A+GARVV+ +R  + A  +A  +   G A+++A
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVA 59

Length = 251

>gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain

 Score = 39.4 bits (93), Expect = 0.001
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 364 GLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
           G  G L    G       K  VVIGAG  G   A  AK  GA V + +    R R+L   
Sbjct: 6   GGFGML--LTGAGGVPPAK-VVVIGAGVVGLGAAATAKGLGAEVTVLDVRPARLRQLESL 62

Query: 424 VGGHALSLA 432
           +G    +L 
Sbjct: 63  LGARFTTLY 71

Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149

>gnl|CDD|240630 cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains

 Score = 40.1 bits (95), Expect = 0.002
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 373 GGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
           GGV      K+ V++GAG  G+  A  A   GA V + +   +R R L +  GG 
Sbjct: 161 GGVPGVPPAKV-VILGAGVVGENAARVALGLGAEVTVLDINLERLRYLDDIFGGR 214

Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms. Length = 359

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 22/44 (50%), Positives = 27/44 (61%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
           VV G+ G G ALA    A+GARV IA+R+ DR    A  +GG A
Sbjct: 2   VVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA 45

Length = 230

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL- 431
           S LAGK  +V GA  G G A A      GA V   +     ARELA  +   GG A ++ 
Sbjct: 3   SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIA 62

Query: 432 ADL 434
           ADL
Sbjct: 63  ADL 65

Length = 250

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
            ++ VVIG G   G  L +G   +G RV +A+   ++A  +A+ +
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI 46

Length = 259

>gnl|CDD|198065 smart00997, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain

 Score = 38.2 bits (90), Expect = 0.004
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 363 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI 409
           DG+    NV       LAGK  VV G G  GK +A   +  GARV++
Sbjct: 11  DGILRATNVL------LAGKNVVVAGYGDVGKGVAARLRGLGARVIV 51

Length = 162

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	616
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	100.0
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	100.0
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	100.0
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	100.0
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	100.0
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	100.0
PRK12548	289	shikimate 5-dehydrogenase; Provisional	100.0
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	100.0
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	100.0
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	100.0
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	100.0
PRK02412	253	aroD 3-dehydroquinate dehydratase; Provisional	100.0
COG0710	231	AroD 3-dehydroquinate dehydratase [Amino acid tran	100.0
TIGR01093	228	aroD 3-dehydroquinate dehydratase, type I. Type II	100.0
PF01487	224	DHquinase_I: Type I 3-dehydroquinase; InterPro: IP	100.0
cd00502	225	DHQase_I Type I 3-dehydroquinase, (3-dehydroquinat	100.0
PRK13575	238	3-dehydroquinate dehydratase; Provisional	100.0
PRK13576	216	3-dehydroquinate dehydratase; Provisional	100.0
PRK01261	229	aroD 3-dehydroquinate dehydratase; Provisional	100.0
KOG0692	595	consensus Pentafunctional AROM protein [Amino acid	100.0
PF08501	83	Shikimate_dh_N: Shikimate dehydrogenase substrate	99.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	99.9
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	99.87
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	99.54
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	99.48
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.41
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	99.32
PRK13940	414	glutamyl-tRNA reductase; Provisional	99.15
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	99.15
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	99.13
PRK08291	330	ectoine utilization protein EutC; Validated	99.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	99.09
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	99.09
PLN00203	519	glutamyl-tRNA reductase	98.69
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.67
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.5
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.45
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.35
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.35
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	98.31
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.29
PRK14982	340	acyl-ACP reductase; Provisional	98.24
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.23
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	98.22
PRK06141	314	ornithine cyclodeaminase; Validated	98.19
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.12
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.11
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.05
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.0
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.99
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.95
PRK08618	325	ornithine cyclodeaminase; Validated	97.94
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	97.92
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.89
KOG1208	314	consensus Dehydrogenases with different specificit	97.88
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.85
PRK07340	304	ornithine cyclodeaminase; Validated	97.83
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.8
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.8
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	97.78
PRK05854	313	short chain dehydrogenase; Provisional	97.76
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.76
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.76
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.73
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.73
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.72
PRK05872	296	short chain dehydrogenase; Provisional	97.69
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.69
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.67
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.67
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.66
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.65
PRK08339	263	short chain dehydrogenase; Provisional	97.64
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	97.64
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.64
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.63
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.62
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.62
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.62
PRK08265	261	short chain dehydrogenase; Provisional	97.6
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.59
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.59
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.59
PRK06139	330	short chain dehydrogenase; Provisional	97.58
KOG0725	270	consensus Reductases with broad range of substrate	97.57
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	97.57
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.56
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.56
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.56
PRK06196	315	oxidoreductase; Provisional	97.55
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.54
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.54
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	97.54
COG0703	172	AroK Shikimate kinase [Amino acid transport and me	97.53
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.53
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.53
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.53
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	97.52
PRK05867	253	short chain dehydrogenase; Provisional	97.52
PRK05717	255	oxidoreductase; Validated	97.51
PRK05876	275	short chain dehydrogenase; Provisional	97.51
PRK08862	227	short chain dehydrogenase; Provisional	97.5
PRK05866	293	short chain dehydrogenase; Provisional	97.5
PRK07063	260	short chain dehydrogenase; Provisional	97.5
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.49
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.47
PRK07825	273	short chain dehydrogenase; Provisional	97.46
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.46
PRK07062	265	short chain dehydrogenase; Provisional	97.45
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.45
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.43
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.43
PRK07060	245	short chain dehydrogenase; Provisional	97.43
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.43
PRK07478	254	short chain dehydrogenase; Provisional	97.42
PRK06197	306	short chain dehydrogenase; Provisional	97.41
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.41
PRK08589	272	short chain dehydrogenase; Validated	97.41
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.4
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.38
PRK09242	257	tropinone reductase; Provisional	97.37
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.36
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.36
PRK06500	249	short chain dehydrogenase; Provisional	97.36
PRK06057	255	short chain dehydrogenase; Provisional	97.35
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.35
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.34
PLN02253	280	xanthoxin dehydrogenase	97.34
PRK06720	169	hypothetical protein; Provisional	97.33
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.33
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.32
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.32
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.31
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.31
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.31
PRK07109	334	short chain dehydrogenase; Provisional	97.31
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.31
PRK07067	257	sorbitol dehydrogenase; Provisional	97.3
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.28
PRK06125	259	short chain dehydrogenase; Provisional	97.28
PRK06949	258	short chain dehydrogenase; Provisional	97.28
PRK06194	287	hypothetical protein; Provisional	97.28
PRK09186	256	flagellin modification protein A; Provisional	97.27
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.25
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	97.24
PLN02928	347	oxidoreductase family protein	97.24
PRK12742	237	oxidoreductase; Provisional	97.23
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.22
PLN02780	320	ketoreductase/ oxidoreductase	97.22
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.22
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.22
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	97.21
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.2
PRK06180	277	short chain dehydrogenase; Provisional	97.2
PRK07890	258	short chain dehydrogenase; Provisional	97.2
PRK07774	250	short chain dehydrogenase; Provisional	97.2
PRK13243	333	glyoxylate reductase; Reviewed	97.2
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.18
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.18
PRK06484	520	short chain dehydrogenase; Validated	97.18
PRK06182	273	short chain dehydrogenase; Validated	97.18
PRK07814	263	short chain dehydrogenase; Provisional	97.17
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.17
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.17
PRK12367	245	short chain dehydrogenase; Provisional	97.17
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.17
PRK07035	252	short chain dehydrogenase; Provisional	97.16
PRK08303	305	short chain dehydrogenase; Provisional	97.16
PRK06046	326	alanine dehydrogenase; Validated	97.16
PRK07791	286	short chain dehydrogenase; Provisional	97.16
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.16
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.16
PRK06172	253	short chain dehydrogenase; Provisional	97.15
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.15
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.15
PRK06138	252	short chain dehydrogenase; Provisional	97.15
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.13
PLN03209	576	translocon at the inner envelope of chloroplast su	97.13
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.12
PRK07024	257	short chain dehydrogenase; Provisional	97.12
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.12
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.11
PRK08251	248	short chain dehydrogenase; Provisional	97.1
PRK08328	231	hypothetical protein; Provisional	97.1
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	97.1
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.09
PRK06484	520	short chain dehydrogenase; Validated	97.09
PRK08643	256	acetoin reductase; Validated	97.09
PRK05993	277	short chain dehydrogenase; Provisional	97.08
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	97.08
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.08
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.08
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.08
PRK06940	275	short chain dehydrogenase; Provisional	97.06
PRK07677	252	short chain dehydrogenase; Provisional	97.05
PRK09072	263	short chain dehydrogenase; Provisional	97.04
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.04
PRK07576	264	short chain dehydrogenase; Provisional	97.03
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.03
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.02
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	97.02
PRK00625	173	shikimate kinase; Provisional	97.01
PRK12939	250	short chain dehydrogenase; Provisional	97.0
PRK08267	260	short chain dehydrogenase; Provisional	96.99
PRK05884	223	short chain dehydrogenase; Provisional	96.99
PRK07454	241	short chain dehydrogenase; Provisional	96.99
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.99
PRK07326	237	short chain dehydrogenase; Provisional	96.98
PRK06841	255	short chain dehydrogenase; Provisional	96.98
PRK06114	254	short chain dehydrogenase; Provisional	96.97
PRK08628	258	short chain dehydrogenase; Provisional	96.97
PRK10538	248	malonic semialdehyde reductase; Provisional	96.96
PRK06398	258	aldose dehydrogenase; Validated	96.96
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	96.96
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.96
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.96
PRK09291	257	short chain dehydrogenase; Provisional	96.96
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.95
PRK06483	236	dihydromonapterin reductase; Provisional	96.94
PRK12829	264	short chain dehydrogenase; Provisional	96.93
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.93
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.91
PRK05875	276	short chain dehydrogenase; Provisional	96.91
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.91
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.9
PLN02494	477	adenosylhomocysteinase	96.9
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.89
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.88
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.87
PRK12828	239	short chain dehydrogenase; Provisional	96.86
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.85
PRK08263	275	short chain dehydrogenase; Provisional	96.85
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.85
PRK07856	252	short chain dehydrogenase; Provisional	96.84
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.84
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	96.84
PRK06482	276	short chain dehydrogenase; Provisional	96.84
PLN02199	303	shikimate kinase	96.84
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.84
PRK07832	272	short chain dehydrogenase; Provisional	96.83
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.83
PRK06523	260	short chain dehydrogenase; Provisional	96.83
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	96.82
PRK05693	274	short chain dehydrogenase; Provisional	96.82
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.82
PRK07831	262	short chain dehydrogenase; Provisional	96.81
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.8
PRK07074	257	short chain dehydrogenase; Provisional	96.8
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.8
PRK05855	582	short chain dehydrogenase; Validated	96.8
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.8
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.79
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.79
PRK05599	246	hypothetical protein; Provisional	96.79
PRK06823	315	ornithine cyclodeaminase; Validated	96.78
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.78
PRK13948	182	shikimate kinase; Provisional	96.76
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.75
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	96.75
PRK07201	657	short chain dehydrogenase; Provisional	96.74
PRK05650	270	short chain dehydrogenase; Provisional	96.74
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.74
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.74
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.74
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.74
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.73
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	96.73
PRK06914	280	short chain dehydrogenase; Provisional	96.72
PRK06101	240	short chain dehydrogenase; Provisional	96.71
PRK08278	273	short chain dehydrogenase; Provisional	96.71
PRK12480	330	D-lactate dehydrogenase; Provisional	96.71
PRK07904	253	short chain dehydrogenase; Provisional	96.71
PRK08655	437	prephenate dehydrogenase; Provisional	96.7
PRK07417	279	arogenate dehydrogenase; Reviewed	96.68
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.67
PRK07102	243	short chain dehydrogenase; Provisional	96.67
PRK06181	263	short chain dehydrogenase; Provisional	96.66
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.66
PRK06407	301	ornithine cyclodeaminase; Provisional	96.66
KOG0409	327	consensus Predicted dehydrogenase [General functio	96.64
PRK06179	270	short chain dehydrogenase; Provisional	96.62
PRK08264	238	short chain dehydrogenase; Validated	96.62
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.61
PRK07806	248	short chain dehydrogenase; Provisional	96.61
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.6
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.59
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.59
PRK06128	300	oxidoreductase; Provisional	96.58
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.57
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.57
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.57
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.57
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.56
PRK08324	681	short chain dehydrogenase; Validated	96.56
PRK13947	171	shikimate kinase; Provisional	96.56
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.53
PRK08177	225	short chain dehydrogenase; Provisional	96.53
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.53
PRK06198	260	short chain dehydrogenase; Provisional	96.51
PRK06199	379	ornithine cyclodeaminase; Validated	96.49
PRK08703	239	short chain dehydrogenase; Provisional	96.49
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.49
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.48
PRK07985	294	oxidoreductase; Provisional	96.48
PRK08605	332	D-lactate dehydrogenase; Validated	96.48
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.47
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.44
PRK08226	263	short chain dehydrogenase; Provisional	96.44
PRK06436	303	glycerate dehydrogenase; Provisional	96.43
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.42
PRK09134	258	short chain dehydrogenase; Provisional	96.41
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.4
PRK06701	290	short chain dehydrogenase; Provisional	96.4
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.4
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.39
PRK13949	169	shikimate kinase; Provisional	96.37
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.37
PRK09135	249	pteridine reductase; Provisional	96.37
PLN02256	304	arogenate dehydrogenase	96.35
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.35
PRK07589	346	ornithine cyclodeaminase; Validated	96.35
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	96.32
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.32
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.31
PRK12743	256	oxidoreductase; Provisional	96.31
PRK07775	274	short chain dehydrogenase; Provisional	96.3
PRK12937	245	short chain dehydrogenase; Provisional	96.3
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.3
PRK12746	254	short chain dehydrogenase; Provisional	96.29
PRK07574	385	formate dehydrogenase; Provisional	96.26
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.25
PRK13946	184	shikimate kinase; Provisional	96.24
PLN03139	386	formate dehydrogenase; Provisional	96.24
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.24
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.23
PRK14021	542	bifunctional shikimate kinase/3-dehydroquinate syn	96.23
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.23
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.22
PLN00015	308	protochlorophyllide reductase	96.21
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.21
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.18
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.18
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.18
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.18
PRK12744	257	short chain dehydrogenase; Provisional	96.18
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.17
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.17
COG1028	251	FabG Dehydrogenases with different specificities (	96.16
PF00208	244	ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val	96.15
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.15
PRK08154	309	anaerobic benzoate catabolism transcriptional regu	96.14
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.14
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.12
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.12
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	96.12
PRK03839	180	putative kinase; Provisional	96.11
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.09
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.09
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.08
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.07
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.06
PRK07069	251	short chain dehydrogenase; Validated	96.05
PRK07041	230	short chain dehydrogenase; Provisional	96.05
PRK06487	317	glycerate dehydrogenase; Provisional	96.05
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.04
PRK12827	249	short chain dehydrogenase; Provisional	96.02
PRK06953	222	short chain dehydrogenase; Provisional	96.01
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.01
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.97
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.96
PLN02712	667	arogenate dehydrogenase	95.96
PRK00131	175	aroK shikimate kinase; Reviewed	95.95
PRK12935	247	acetoacetyl-CoA reductase; Provisional	95.93
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	95.93
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.9
PRK06932	314	glycerate dehydrogenase; Provisional	95.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.89
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.89
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.89
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.89
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.88
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.88
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.87
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.87
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.86
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.86
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.85
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	95.84
PLN02712	667	arogenate dehydrogenase	95.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.84
PRK08219	227	short chain dehydrogenase; Provisional	95.83
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.81
PLN02306	386	hydroxypyruvate reductase	95.8
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.79
PRK03731	171	aroL shikimate kinase II; Reviewed	95.78
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.78
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.76
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	95.76
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.75
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.75
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.74
PRK05057	172	aroK shikimate kinase I; Reviewed	95.74
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.73
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.73
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	95.68
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	95.68
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.67
KOG4230	935	consensus C1-tetrahydrofolate synthase [Coenzyme t	95.67
PRK01390	460	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.67
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.67
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.65
PRK15059	292	tartronate semialdehyde reductase; Provisional	95.64
PRK09414	445	glutamate dehydrogenase; Provisional	95.62
PRK04690	468	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.56
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	95.56
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.54
PRK12747	252	short chain dehydrogenase; Provisional	95.53
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.52
PRK08507	275	prephenate dehydrogenase; Validated	95.51
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.5
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.5
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.44
cd00464	154	SK Shikimate kinase (SK) is the fifth enzyme in th	95.42
PRK07577	234	short chain dehydrogenase; Provisional	95.4
PRK06123	248	short chain dehydrogenase; Provisional	95.37
COG0673	342	MviM Predicted dehydrogenases and related proteins	95.34
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.34
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.33
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.33
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.31
cd00958	235	DhnA Class I fructose-1,6-bisphosphate (FBP) aldol	95.3
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.26
PRK01368	454	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.26
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.25
PRK08017	256	oxidoreductase; Provisional	95.22
cd04726	202	KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl	95.21
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.2
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.2
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.13
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	95.12
PRK03803	448	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.12
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	95.12
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.11
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.11
PLN02686	367	cinnamoyl-CoA reductase	95.11
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.11
PRK09496	453	trkA potassium transporter peripheral membrane com	95.1
PLN02650	351	dihydroflavonol-4-reductase	95.1
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.09
PLN00198	338	anthocyanidin reductase; Provisional	95.09
PRK14031	444	glutamate dehydrogenase; Provisional	95.08
cd04740	296	DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c	95.08
PRK07680	273	late competence protein ComER; Validated	95.07
PRK14030	445	glutamate dehydrogenase; Provisional	95.05
PRK11572	248	copper homeostasis protein CutC; Provisional	95.03
PLN02214	342	cinnamoyl-CoA reductase	95.0
PRK06924	251	short chain dehydrogenase; Provisional	95.0
CHL00194	317	ycf39 Ycf39; Provisional	95.0
PLN02653	340	GDP-mannose 4,6-dehydratase	94.98
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.95
PLN02688	266	pyrroline-5-carboxylate reductase	94.92
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	94.89
PRK09140	206	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R	94.89
PLN02477	410	glutamate dehydrogenase	94.88
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.88
PRK08223	287	hypothetical protein; Validated	94.85
PRK06545	359	prephenate dehydrogenase; Validated	94.77
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	94.74
cd07937	275	DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcar	94.65
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.6
PRK09496	453	trkA potassium transporter peripheral membrane com	94.58
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	94.56
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.53
TIGR03128	206	RuMP_HxlA 3-hexulose-6-phosphate synthase. at the	94.51
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.49
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	94.48
COG3268	382	Uncharacterized conserved protein [Function unknow	94.48
PLN02858	1378	fructose-bisphosphate aldolase	94.46
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.44
PRK06217	183	hypothetical protein; Validated	94.43
PRK07578	199	short chain dehydrogenase; Provisional	94.41
PLN02858	1378	fructose-bisphosphate aldolase	94.41
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	94.4
cd00945	201	Aldolase_Class_I Class I aldolases. The class I al	94.34
PRK08818	370	prephenate dehydrogenase; Provisional	94.33
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	94.31
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.28
PRK03806	438	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.27
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.25
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.2
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.18
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.18

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=100.00  E-value=6e-117  Score=986.07  Aligned_cols=520  Identities=81%  Similarity=1.232  Sum_probs=467.7

Q ss_pred             cccccccccccCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccC
Q 007151            8 VASGSKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPI   87 (616)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~   87 (616)
                      .||.---+|+++++++++||||+++++.++++.+++++...++|+||||+|+|.+..+.+++..+++..++|+|||+|++
T Consensus         7 ~~~~~~~~~~~~~~~~~~icv~i~~~~~~e~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~~~~~~~~plI~T~R~~   86 (529)
T PLN02520          7 LASDDLQGSGGVRRNPTLICVPIMADSVDKMLIEMAKAKELGADLVEIRLDFLKNFNPREDLKTLIKQSPLPTLVTYRPK   86 (529)
T ss_pred             chhhhhhcccccccCCCEEEEEeCCCCHHHHHHHHHHhhhcCCCEEEEEeccccccCCHHHHHHHHhcCCCcEEEEeccH
Confidence            34555568999999999999999999999999999888778999999999999876555567777777789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCC
Q 007151           88 WEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGA  167 (616)
Q Consensus        88 ~eGG~~~~~~e~~~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~ga  167 (616)
                      +|||.|++++++|+++++.+++.|+||||||++..++..+.+...++.++++|+|||||++||+.+++.+++++|.++||
T Consensus        87 ~eGG~~~~~~~~~~~ll~~~~~~~~d~iDiEl~~~~~~~~~~~~~~~~~~~vI~S~H~f~~tP~~~el~~~~~~~~~~ga  166 (529)
T PLN02520         87 WEGGQYEGDENKRQDALRLAMELGADYVDVELKVAHEFINSISGKKPEKCKVIVSSHNYENTPSVEELGNLVARIQATGA  166 (529)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHhCCCEEEEEcCCchhHHHHHHhhhhcCCEEEEEecCCCCCCCHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999988766666655566899999999999999999999999999999999


Q ss_pred             CEEEEEeecCCHhHHHHHHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcc
Q 007151          168 DIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  247 (616)
Q Consensus       168 DIvKia~~~~s~~D~~~ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr  247 (616)
                      ||+|+|+||++.+|++++++++.+.+.|+|+|+||+.|++||+++++|||++||++++.+.++||||+++++++++|+++
T Consensus       167 Di~Kia~~~~~~~D~~~ll~~~~~~~~p~i~~~MG~~G~~sRi~~~~~GS~lTy~~~~~~~~sAPGQ~~~~~l~~~~~~~  246 (529)
T PLN02520        167 DIVKIATTALDITDVARMFQITVHSQVPTIGLVMGERGLISRILCPKFGGYLTFGTLEAGKVSAPGQPTIKDLLDLYNFR  246 (529)
T ss_pred             CEEEEecCCCCHHHHHHHHHHHhhcCCCEEEEecCCCCchheecccccCCceeeeecCcccccCCCCCCHHHHHHHhhhh
Confidence            99999999999999999999887778999999999999999999999999999999986567999999999999999999


Q ss_pred             cCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccH
Q 007151          248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT  327 (616)
Q Consensus       248 ~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~  327 (616)
                      .++++|++|||||+||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|+|+|||||||+++++|+|++|+
T Consensus       247 ~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~~~~  326 (529)
T PLN02520        247 QIGPDTKVYGIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLVDDLAKFLQTYSSPDFAGFSCTIPHKEDALKCCDEVDP  326 (529)
T ss_pred             cccCCceEEEEEcCCcccccCHHHHHHHHHHCCCCcEEEEeehhhHHHHHHHHhhCCCCEEEECcCCHHHHHHHhccCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeE
Q 007151          328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV  407 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V  407 (616)
                      .|+.|||||||+++++||+|+||||||.||+++|++.+...+ ..+..+.++++|+++|+|+||+|++++++|++.|++|
T Consensus       327 ~A~~iGAVNTvv~~~~~g~l~G~NTD~~G~~~~l~~~~~~~~-~~~~~~~~~~~k~vlIlGaGGagrAia~~L~~~G~~V  405 (529)
T PLN02520        327 IAKSIGAINTIIRRPSDGKLVGYNTDYIGAISAIEDGLRASG-SSPASGSPLAGKLFVVIGAGGAGKALAYGAKEKGARV  405 (529)
T ss_pred             HHHHhCCceEEEEeCCCCEEEEEcccHHHHHHHHHhhhcccc-cccccccCCCCCEEEEECCcHHHHHHHHHHHHCCCEE
Confidence            999999999999862278999999999999999975432100 0000124578899999999999999999999999999


Q ss_pred             EEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH
Q 007151          408 VIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR  487 (616)
Q Consensus       408 ~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~  487 (616)
                      +++||+.++++++++.++...++++++.+.....+|+||||||+||.|..+..|++...+++..+|+|++|+|.+|+|++
T Consensus       406 ~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~T~ll~  485 (529)
T PLN02520        406 VIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKITRLLR  485 (529)
T ss_pred             EEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCcCHHHH
Confidence            99999999999999988655555555433122357999999999999876677888778888899999999999999999


Q ss_pred             HHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       488 ~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+++||++++|++||++||+.||++|||.++|.+.+  ++.|
T Consensus       486 ~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~--~~~l  526 (529)
T PLN02520        486 EAEESGAIIVSGTEMFIRQAYEQFERFTGLPAPKELF--REIM  526 (529)
T ss_pred             HHHHCCCeEeCcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            9999999999999999999999999999999988766  5665

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=100.00  E-value=2.7e-102  Score=858.99  Aligned_cols=461  Identities=29%  Similarity=0.422  Sum_probs=412.0

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL  104 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll  104 (616)
                      ||||||++++.+|++++++.+. .++|+||||+|+|++.+..+ +..+++..+.|++ |+|+++     ++++++|++++
T Consensus         1 ~icv~i~~~~~~e~~~~~~~~~-~~~D~vE~R~D~~~~~~~~~-~~~l~~~~~~pil-T~R~~~-----~~~~~~~~~~l   72 (477)
T PRK09310          1 MLCATISGPSFLEAKQQILRSL-KLVDCIELRVDLLLSLSDLE-LKKLIELAPIPIL-TWKKHE-----SCSQAAWIDKM   72 (477)
T ss_pred             CEEEEecCCCHHHHHHHHHHhc-ccCCEEEEEehhhccCCHHH-HHHHHhcCCCceE-EeccCc-----cCCHHHHHHHH
Confidence            6999999999999999998876 67999999999998765443 6777664466766 999987     46889999999


Q ss_pred             HHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHhHHHH
Q 007151          105 RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVAR  184 (616)
Q Consensus       105 ~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~D~~~  184 (616)
                      +.+++.|+||||||++.+++.++++... ++++|+|+|||||+.    +++.+++++|.++||||+|||+||++.+|+++
T Consensus        73 ~~~~~~~~d~vDiEl~~~~~~~~~l~~~-~~~~kvI~S~Hdf~~----~~l~~~~~~~~~~gaDi~Kia~~a~~~~D~l~  147 (477)
T PRK09310         73 QSLAKLNPNYLDIDKDFPKEALIRIRKL-HPKIKIILSYHTSEH----EDIIQLYNEMLASAADYYKIAVSSSSSTDLLN  147 (477)
T ss_pred             HHHHHhCCCEEEEEecCCHHHHHHHHHh-CCCCEEEEEcCCCCc----chHHHHHHHHHHcCCCEEEEeeCCCCHHHHHH
Confidence            9999999999999999988888887543 359999999999943    57999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcccCCCCceEEEEeccCcc
Q 007151          185 VFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVG  264 (616)
Q Consensus       185 ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr~~~~~t~~~~liG~Pi~  264 (616)
                      +++++.+...|+|+|+||+.|++||++++.|||++||+++..+.++||||++++++. .|+++.++++|++|||||+||+
T Consensus       148 ll~~~~~~~~p~i~i~MG~~G~~SRil~~~~gS~~Tfa~~~~~~~~APGQi~~~~l~-~~~~~~~~~~t~~~~liG~pi~  226 (477)
T PRK09310        148 IIHQKRSLPENTTVLCMGGMGRPSRILSPLLQNAFNYAAGIGAPPVAPGQLSLEHLL-FYNYANLSAQSPIYGLIGDPVD  226 (477)
T ss_pred             HHHHHhhCCCCEEEEEeCCCchHHhhcchhhcCccccccccCccccCCCCcCHHHHH-hcchhccCCCceEEEEECCCcc
Confidence            999988878899999999999999999999999999999876445799999999998 5789999989999999999999


Q ss_pred             cccCHHHHHHHHHHcCCCeeEeccCcc--cHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhhhcceeEEEEec
Q 007151          265 HSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQ  342 (616)
Q Consensus       265 hS~SP~ihn~~f~~lgl~~~Y~~~~~~--~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAVNTIv~~~  342 (616)
                      ||+||.|||++|+++|+|+.|.+++++  +++++++.++.++|.|+|||||||++|++|+|++|+.|+.+||||||+++ 
T Consensus       227 hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~~~~~A~~iGAVNTv~~~-  305 (477)
T PRK09310        227 RSISHLSHNPLFSQLSLNCPYIKLPLTPQELPKFFSTIRDLPFLGLSVTMPLKTAVLDFLDKLDPSVKLCGSCNTLVFR-  305 (477)
T ss_pred             cccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHhccCCHHHHHhCcceEEEee-
Confidence            999999999999999999999999884  79999999999999999999999999999999999999999999999987 


Q ss_pred             cCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          343 SDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       343 ~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                       +|+|+||||||.||+.+|++.           +.++++++++|+|+||+|+++++.|.+.|++|+++||+.++++++++
T Consensus       306 -~g~l~G~NTD~~G~~~~l~~~-----------~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        306 -NGKIEGYNTDGEGLFSLLKQK-----------NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             -CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence             899999999999999998652           14567899999999999999999999999999999999999999998


Q ss_pred             HHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHH
Q 007151          423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       423 ~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      .++....+++++.+  ..++|+||||||.||.       ++. .+.  .+|+|++|+|.+|+|+++|+++||++++|++|
T Consensus       374 ~~~~~~~~~~~~~~--l~~~DiVInatP~g~~-------~~~-~l~--~~v~D~~Y~P~~T~ll~~A~~~G~~~~~G~~M  441 (477)
T PRK09310        374 RCQGKAFPLESLPE--LHRIDIIINCLPPSVT-------IPK-AFP--PCVVDINTLPKHSPYTQYARSQGSSIIYGYEM  441 (477)
T ss_pred             HhccceechhHhcc--cCCCCEEEEcCCCCCc-------chh-HHh--hhEEeccCCCCCCHHHHHHHHCcCEEECcHHH
Confidence            87655445554433  3568999999999873       222 232  48999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCchH
Q 007151          503 FIGQAYEQYERFTGLPGKMNAP  524 (616)
Q Consensus       503 Lv~Qa~~qf~lwtG~~~p~~~~  524 (616)
                      |++||+.||++|||...+.+..
T Consensus       442 l~~Qa~~~f~lw~g~~~~~~~~  463 (477)
T PRK09310        442 FAEQALLQFRLWFPTLLFKHLE  463 (477)
T ss_pred             HHHHHHHHHHHHcCCcccHHHH
Confidence            9999999999999998765543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.2e-67  Score=539.29  Aligned_cols=268  Identities=40%  Similarity=0.640  Sum_probs=238.9

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcc--cHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~--~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.+++++  +|+.+++.++++++.|+|||||||+++++|+|++|
T Consensus         2 ~~~~t~~~~viG~Pi~HS~SP~~Hn~~~~~lGl~~~Y~a~~v~~~~l~~~v~~~~~~g~~G~NVTiP~Ke~~~~~lD~l~   81 (283)
T COG0169           2 MNGKTKLFGVIGNPISHSLSPRMHNAAFRALGLDYVYLAFEVPPEDLPEAVSGIRALGFRGLNVTIPFKEAALPLLDELS   81 (283)
T ss_pred             CCCCceEEEEEcCCcccCcCHHHHHHHHHHcCCCceEEEeecCHHHHHHHHHHHHhcCCCeeEECCccHHHHHHHHhcCC
Confidence            5667899999999999999999999999999999999999995  99999999999999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.|||||||+++. ||+|+||||||.||+++|++...         ..+..+++++|+||||+|||++++|++.|+ 
T Consensus        82 ~~A~~iGAVNTl~~~~-~g~l~G~NTD~~G~~~~L~~~~~---------~~~~~~~~vlilGAGGAarAv~~aL~~~g~~  151 (283)
T COG0169          82 PRARLIGAVNTLVRED-DGKLRGYNTDGIGFLRALKEFGL---------PVDVTGKRVLILGAGGAARAVAFALAEAGAK  151 (283)
T ss_pred             HHHHHhCCceEEEEcc-CCEEEEEcCCHHHHHHHHHhcCC---------CcccCCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence            9999999999999982 49999999999999999976311         135578999999999999999999999998 


Q ss_pred             eEEEEECCHHHHHHHHHHHCCcc-----cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          406 RVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~~~-----~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      +|+|+|||.+|+++|++.++...     ..+.++..  ..++|+||||||+||.+..+..|++.+.+.+..+|+|++|+|
T Consensus       152 ~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~--~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P  229 (283)
T COG0169         152 RITVVNRTRERAEELADLFGELGAAVEAAALADLEG--LEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP  229 (283)
T ss_pred             EEEEEeCCHHHHHHHHHHhhhccccccccccccccc--ccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCC
Confidence            89999999999999999987422     22333332  115899999999999986444566666789999999999999


Q ss_pred             cccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       481 ~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      .+|||+++|+++|+++++|++||++||+++|++|||+++|.+.+  ++++
T Consensus       230 ~~TplL~~A~~~G~~~idGl~Mlv~Qaa~aF~lwtg~~p~~~~~--~~a~  277 (283)
T COG0169         230 LETPLLREARAQGAKTIDGLGMLVHQAAEAFELWTGVEPPVDVM--KEAL  277 (283)
T ss_pred             CCCHHHHHHHHcCCeEECcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999999999999999999999999999999888877  6665

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-66  Score=534.92  Aligned_cols=263  Identities=28%  Similarity=0.409  Sum_probs=231.2

Q ss_pred             CceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc-------ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcc
Q 007151          252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  324 (616)
Q Consensus       252 ~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~-------~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~  324 (616)
                      ++++|||||+||+||+||.|||++|+++|+|+.|.++++       ++++++++.++.++|.|+|||||||+++++|+|+
T Consensus         3 ~~~~~gliG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~lD~   82 (283)
T PRK14027          3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE   82 (283)
T ss_pred             CceEEEEECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhcCCCEEEECccCHHHHHHHhhh
Confidence            578999999999999999999999999999999999986       4799999999999999999999999999999999


Q ss_pred             ccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC
Q 007151          325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  404 (616)
Q Consensus       325 ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G  404 (616)
                      +|+.|+.+||||||+++. ||+|+||||||.||+++|++..           .+.++|+++|+||||+|||++++|++.|
T Consensus        83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~Gf~~~L~~~~-----------~~~~~k~vlilGaGGaarAi~~aL~~~g  150 (283)
T PRK14027         83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-----------PNAKLDSVVQVGAGGVGNAVAYALVTHG  150 (283)
T ss_pred             CCHHHHHhCCceEEEECC-CCcEEEEcCCHHHHHHHHHhcC-----------cCcCCCeEEEECCcHHHHHHHHHHHHCC
Confidence            999999999999999852 8999999999999999997421           2456899999999999999999999999


Q ss_pred             C-eEEEEECCHHHHHHHHHHHCCcc-------cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          405 A-RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       405 ~-~V~v~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      + +|+|+||+.+|++++++.+....       .+..++.. ....+|+||||||+||.+. +..|++...+.+..+|+|+
T Consensus       151 ~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~-~~~~~divINaTp~Gm~~~-~~~~~~~~~l~~~~~v~D~  228 (283)
T PRK14027        151 VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDV  228 (283)
T ss_pred             CCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHH-HHhhcCEEEEcCCCCCCCC-CCCCCCHHHcCCCcEEEEc
Confidence            9 89999999999999998874211       11111111 2345899999999999874 3456766678888999999


Q ss_pred             eeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       477 ~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+|.+|+|+++|+++||++++|++||++||++||++|||.++|.+.|  ++.+
T Consensus       229 vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lw~G~~~~~~~~--~~~~  280 (283)
T PRK14027        229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRM--RETF  280 (283)
T ss_pred             ccCCCCCHHHHHHHHCCCEEEccHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            999999999999999999999999999999999999999999887766  5654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=100.00  E-value=8.2e-66  Score=534.24  Aligned_cols=266  Identities=30%  Similarity=0.490  Sum_probs=233.1

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++|+++++.++..+|.|+|||||||++|++|+|++|
T Consensus         3 ~~~~t~~~gliG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~~~~~~D~l~   82 (288)
T PRK12749          3 VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELT   82 (288)
T ss_pred             cCCCceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhccCC
Confidence            456789999999999999999999999999999999999999  479999999998899999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+||||+|||++++|+.+|+ 
T Consensus        83 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~Gf~~~l~~~-----------~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~  149 (288)
T PRK12749         83 PAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----------GFDIKGKTMVLLGAGGASTAIGAQGAIEGLK  149 (288)
T ss_pred             HHHHHhCceeEEEcc--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999876  899999999999999998742           145678999999999999999999999999 


Q ss_pred             eEEEEECC---HHHHHHHHHHHCCc------ccchhc---ccccCCCCccEEEEcCCCCCCCCCCCCc-cccccccCccE
Q 007151          406 RVVIANRT---YDRARELAETVGGH------ALSLAD---LENFNPEDGMILANTTSIGMQPKVDETP-IPKHALGHYAL  472 (616)
Q Consensus       406 ~V~v~nRt---~~ka~~la~~~~~~------~~~~~~---l~~~~~~~~divInat~~gm~p~~~~~p-i~~~~l~~~~~  472 (616)
                      +|+|+||+   .+++++++++++..      ..++++   +.+ ...++|+||||||+||.|..+..+ ++...+++..+
T Consensus       150 ~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~  228 (288)
T PRK12749        150 EIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLVNDISLLHPGLL  228 (288)
T ss_pred             EEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCE
Confidence            99999999   56999999988532      112221   111 234689999999999998655433 34456778899


Q ss_pred             EEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       473 v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      |+|++|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|  ++.|
T Consensus       229 v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~ML~~Qa~~~f~lwtg~~~~~~~~--~~~~  284 (288)
T PRK12749        229 VTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYV--KQVM  284 (288)
T ss_pred             EEEecCCCccCHHHHHHHHCCCeEECCHHHHHHHHHHHHHHhcCCCCCHHHH--HHHh
Confidence            9999999999999999999999999999999999999999999999887766  5554

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=1.6e-65  Score=531.94  Aligned_cols=266  Identities=30%  Similarity=0.399  Sum_probs=235.9

Q ss_pred             CCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc-------ccHHHHHHHhccCCCCeEEEcccchHHHHhhh
Q 007151          250 GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCC  322 (616)
Q Consensus       250 ~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~-------~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~l  322 (616)
                      +..+++|||||+||+||+||.|||++|+++|+|+.|.++++       +++.++++.++.++|.|+|||||||+++++|+
T Consensus         2 ~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~~   81 (284)
T PRK12549          2 SRPSFLAGLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAERMGFAGLNITHPCKQAVIPHL   81 (284)
T ss_pred             CccceEEEEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHh
Confidence            34678999999999999999999999999999999999986       37899999999899999999999999999999


Q ss_pred             ccccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH
Q 007151          323 DEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA  402 (616)
Q Consensus       323 D~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~  402 (616)
                      |++|+.|+.+||||||+++  +|+|+||||||.||+++|++..           .++++++|+|+|+||+||+++++|.+
T Consensus        82 D~~~~~A~~iGAvNTv~~~--~g~l~G~NTD~~G~~~~l~~~~-----------~~~~~k~vlIlGaGGaaraia~aL~~  148 (284)
T PRK12549         82 DELSDDARALGAVNTVVFR--DGRRIGHNTDWSGFAESFRRGL-----------PDASLERVVQLGAGGAGAAVAHALLT  148 (284)
T ss_pred             ccCCHHHHHhCCceEEEec--CCEEEEEcCCHHHHHHHHHhhc-----------cCccCCEEEEECCcHHHHHHHHHHHH
Confidence            9999999999999999886  8999999999999999997531           24578999999999999999999999


Q ss_pred             CCC-eEEEEECCHHHHHHHHHHHCCc-----ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          403 KGA-RVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       403 ~G~-~V~v~nRt~~ka~~la~~~~~~-----~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .|+ +|+|+||+.+|+++++++++..     ...++++.+ ...++|+||||||+||.+. +..|++.+.+.+..+|+|+
T Consensus       149 ~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~-~~~~~~~~~l~~~~~v~Di  226 (284)
T PRK12549        149 LGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAA-ALAAADGLVHATPTGMAKH-PGLPLPAELLRPGLWVADI  226 (284)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHh-hhCCCCEEEECCcCCCCCC-CCCCCCHHHcCCCcEEEEe
Confidence            999 8999999999999999987532     122233222 2456899999999999875 3457777778888999999


Q ss_pred             eeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 007151          477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVL  532 (616)
Q Consensus       477 ~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~~  532 (616)
                      +|+|.+|+|+++|+++||++++|++||++||+.||++|||+++|.+.|  ++.+..
T Consensus       227 vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~~wtg~~~~~~~~--~~~~~~  280 (284)
T PRK12549        227 VYFPLETELLRAARALGCRTLDGGGMAVFQAVDAFELFTGREPDAERM--LAHFAS  280 (284)
T ss_pred             eeCCCCCHHHHHHHHCCCeEecCHHHHHHHHHHHHHHhcCCCCCHHHH--HHHHHH
Confidence            999999999999999999999999999999999999999999988766  777643

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-65  Score=529.48  Aligned_cols=267  Identities=34%  Similarity=0.544  Sum_probs=234.5

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      ++..|++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.++..+|+|+|||||||++|++|+|++|
T Consensus         5 ~~~~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~v~~~ld~~~   84 (289)
T PRK12548          5 ISGTTGLLGLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFDIPVDKVPDAIKAIKTFNMRGANVTMPCKSEAAKYMDELS   84 (289)
T ss_pred             cCCceeEEEEEcCCcccccCHHHHHHHHHHcCCCEEEEEEecCHHHHHHHHHHHHHCCCCEEEECccCHHHHHHHhhcCC
Confidence            566788999999999999999999999999999999999998  479999999998999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.+||||||+++  ||+|+||||||.||+.+|++.           ...+++|+++|+||||+|||++++|++.|+ 
T Consensus        85 ~~A~~iGavNTi~~~--~g~l~G~NTD~~G~~~~l~~~-----------~~~~~~k~vlI~GAGGagrAia~~La~~G~~  151 (289)
T PRK12548         85 PAARIIGAVNTIVND--DGKLTGHITDGLGFVRNLREH-----------GVDVKGKKLTVIGAGGAATAIQVQCALDGAK  151 (289)
T ss_pred             HHHHHhCceeEEEeE--CCEEEEEecCHHHHHHHHHhc-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999887  899999999999999998752           134678999999999999999999999999 


Q ss_pred             eEEEEECCH---HHHHHHHHHHCCc-------ccchhccccc--CCCCccEEEEcCCCCCCCCCCCCcc-ccccccCccE
Q 007151          406 RVVIANRTY---DRARELAETVGGH-------ALSLADLENF--NPEDGMILANTTSIGMQPKVDETPI-PKHALGHYAL  472 (616)
Q Consensus       406 ~V~v~nRt~---~ka~~la~~~~~~-------~~~~~~l~~~--~~~~~divInat~~gm~p~~~~~pi-~~~~l~~~~~  472 (616)
                      +|+|+||+.   ++++++++++...       ..++++..+.  ....+|+||||||+||.|..+..|+ +...+.+..+
T Consensus       152 ~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~  231 (289)
T PRK12548        152 EITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLV  231 (289)
T ss_pred             EEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCE
Confidence            699999996   8899988877421       1233322111  2345799999999999987666677 4457888899


Q ss_pred             EEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       473 v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      |+|++|+|.+|+|+++|+++||++++|++||++||++||++|||+++|.+.+  ++.+
T Consensus       232 v~D~vY~P~~T~ll~~A~~~G~~~~~G~~ML~~Qa~~~f~lwtg~~~~~~~~--~~~~  287 (289)
T PRK12548        232 VADTVYNPKKTKLLEDAEAAGCKTVGGLGMLLWQGAEAYKLYTGKDMPVEEV--KELY  287 (289)
T ss_pred             EEEecCCCCCCHHHHHHHHCCCeeeCcHHHHHHHHHHHHHHhcCCCCCHHHH--HHHh
Confidence            9999999999999999999999999999999999999999999999887665  5554

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=8.2e-64  Score=518.41  Aligned_cols=267  Identities=35%  Similarity=0.579  Sum_probs=237.6

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      ++.+|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++..+|+|+|||||||+++++|+|++|
T Consensus         1 ~~~~~~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~   80 (278)
T PRK00258          1 ITGKTRLYAVIGNPIAHSKSPLIHNAAFKQLGLDGVYLAILVPPEDLEDAVKGFFALGGRGANVTVPFKEAAFALADELS   80 (278)
T ss_pred             CCCceeEEEEECCchhcccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHhhcCC
Confidence            356789999999999999999999999999999999999999  589999999998899999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+++||||||+++  +|+|+||||||.||+.+|++.+          +.++++++++|+|+||+||+++++|...|+ 
T Consensus        81 ~~A~~igavNtv~~~--~g~l~G~NTD~~G~~~~l~~~~----------~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~  148 (278)
T PRK00258         81 ERARLIGAVNTLVLE--DGRLIGDNTDGIGFVRALEERL----------GVDLKGKRILILGAGGAARAVILPLLDLGVA  148 (278)
T ss_pred             HHHHHhCCceEEEee--CCEEEEEcccHHHHHHHHHhcc----------CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCC
Confidence            999999999999976  8999999999999999987422          135788999999999999999999999996 


Q ss_pred             eEEEEECCHHHHHHHHHHHCCcc-cch-hcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCccc
Q 007151          406 RVVIANRTYDRARELAETVGGHA-LSL-ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT  483 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~~~-~~~-~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T  483 (616)
                      +|+|+||+.++++++++.++... +.+ .+..+ ...++|+||||||+||.|..+..|++.+.+++..+|+|++|+|.+|
T Consensus       149 ~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~-~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T  227 (278)
T PRK00258        149 EITIVNRTVERAEELAKLFGALGKAELDLELQE-ELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT  227 (278)
T ss_pred             EEEEEeCCHHHHHHHHHHhhhccceeecccchh-ccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC
Confidence            99999999999999999876331 222 11222 3456899999999999875445567777888889999999999999


Q ss_pred             HHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       484 ~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+++|+++||++++|++||++||+.||++|||.++|.+.+  ++++
T Consensus       228 ~ll~~A~~~G~~~~~G~~Ml~~Qa~~~f~~wtg~~~~~~~~--~~~~  272 (278)
T PRK00258        228 PFLAWAKAQGARTIDGLGMLVHQAAEAFELWTGVRPPVEPM--LAAL  272 (278)
T ss_pred             HHHHHHHHCcCeecCCHHHHHHHHHHHHHHHcCCCCCHHHH--HHHH
Confidence            99999999999999999999999999999999999888876  6665

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=100.00  E-value=1.9e-63  Score=511.98  Aligned_cols=260  Identities=27%  Similarity=0.398  Sum_probs=229.9

Q ss_pred             cCCCCceE-EEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          248 QMGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       248 ~~~~~t~~-~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      +++++|++ |||||+|  ||+||.|||++|+++|+|+.|.+++.++++++++.++.++|.|+|||||||++|++|+|++|
T Consensus         4 ~~~~~~~~~~gliG~P--~~~Sp~ihn~~f~~~gl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~lD~l~   81 (272)
T PRK12550          4 MINKDTQLCISLAARP--SNFGTRFHNYLYEALGLNFLYKAFTTTDLTAAIGGVRALGIRGCAVSMPFKEAVIPLVDELD   81 (272)
T ss_pred             cCCCCceEEEEEEccc--hhcCHHHHHHHHHHcCCCcEEEecCHhHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhcCC
Confidence            46677885 9999999  77899999999999999999999998899999999998999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.+||||||+++  ||+|+||||||.||+++|++. .          .. .+++++|+||||+|||++++|.+.|+ 
T Consensus        82 ~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-~----------~~-~~~~vlilGaGGaarAi~~aL~~~g~~  147 (272)
T PRK12550         82 PSAQAIESVNTIVNT--DGHLKAYNTDYIAIAKLLASY-Q----------VP-PDLVVALRGSGGMAKAVAAALRDAGFT  147 (272)
T ss_pred             HHHHHhCCeeEEEee--CCEEEEEecCHHHHHHHHHhc-C----------CC-CCCeEEEECCcHHHHHHHHHHHHCCCC
Confidence            999999999999887  899999999999999999752 1          22 35789999999999999999999999 


Q ss_pred             eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC--CCccccccccCccEEEEEeeCCccc
Q 007151          406 RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD--ETPIPKHALGHYALVFDAVYTPKIT  483 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~--~~pi~~~~l~~~~~v~Di~Y~P~~T  483 (616)
                      +|+|+||+.++++++++.++....  +++   ....+|+||||||+||.|..+  ..|++...+.+..+|+|++|+|.+|
T Consensus       148 ~i~i~nR~~~~a~~la~~~~~~~~--~~~---~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T  222 (272)
T PRK12550        148 DGTIVARNEKTGKALAELYGYEWR--PDL---GGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET  222 (272)
T ss_pred             EEEEEeCCHHHHHHHHHHhCCcch--hhc---ccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC
Confidence            899999999999999988753211  111   123489999999999987532  3467777788889999999999999


Q ss_pred             HHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       484 ~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+++|+++||++++|++||++||+.||++|||+++|.+.+  ++++
T Consensus       223 ~ll~~A~~~G~~~i~Gl~MLi~Qa~~~f~lwtg~~~~~~~~--~~~~  267 (272)
T PRK12550        223 PLIRYARARGKTVITGAEVIALQAVEQFVLYTGVRPSDELI--AEAA  267 (272)
T ss_pred             HHHHHHHHCcCeEeCCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999999999999999999999999999887766  6665

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=100.00  E-value=1.7e-62  Score=509.03  Aligned_cols=259  Identities=29%  Similarity=0.411  Sum_probs=220.5

Q ss_pred             CceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcc---cHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHh
Q 007151          252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTV  328 (616)
Q Consensus       252 ~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~---~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~  328 (616)
                      .+++|||||+||+||+||.|||++|+++|+|+.|.+++++   ++.++++.++ .+|.|+|||||||+++++|+|++|+.
T Consensus         4 ~~~~~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~~~~~l~~~~~~~~-~~~~G~nVT~P~K~~~~~~~d~~~~~   82 (282)
T TIGR01809         4 GPKKAFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETCSAEELKEVLSGFG-PQFGGASVTIPLKFAILRFADEHTDR   82 (282)
T ss_pred             CCeEEEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecCCHHHHHHHHHhcC-CCCcEEEECCCCHHHHHHHhhcCCHH
Confidence            4689999999999999999999999999999999999873   6888888774 49999999999999999999999999


Q ss_pred             HhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eE
Q 007151          329 AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RV  407 (616)
Q Consensus       329 A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V  407 (616)
                      |+.+||||||++++ ||+|+||||||.||+.+|++...         ..++++++|+|+||||+||+++++|.++|+ +|
T Consensus        83 A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~~~---------~~~~~~k~vlvlGaGGaarai~~aL~~~G~~~i  152 (282)
T TIGR01809        83 ASLIGSVNTLLRTQ-NGIWKGDNTDWDGIAGALANIGK---------FEPLAGFRGLVIGAGGTSRAAVYALASLGVTDI  152 (282)
T ss_pred             HHHhCceeEEEEcC-CCcEEEecCCHHHHHHHHHhhCC---------ccccCCceEEEEcCcHHHHHHHHHHHHcCCCeE
Confidence            99999999999853 88999999999999999975210         014678999999999999999999999999 89


Q ss_pred             EEEECCHHHHHHHHHHHCCcc--cch---hcccccCCCCccEEEEcCCCCCCCCCCCCcccc-------ccccCccEEEE
Q 007151          408 VIANRTYDRARELAETVGGHA--LSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPK-------HALGHYALVFD  475 (616)
Q Consensus       408 ~v~nRt~~ka~~la~~~~~~~--~~~---~~l~~~~~~~~divInat~~gm~p~~~~~pi~~-------~~l~~~~~v~D  475 (616)
                      +|+||+.+|+++++++++...  ..+   +++.. ...++|+||||||+||...  ..++..       ..+.+..+++|
T Consensus       153 ~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-~~~~~DiVInaTp~g~~~~--~~~l~~~~~~~~~~~~~~~~~v~D  229 (282)
T TIGR01809       153 TVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-IEKAAEVLVSTVPADVPAD--YVDLFATVPFLLLKRKSSEGIFLD  229 (282)
T ss_pred             EEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-cccCCCEEEECCCCCCCCC--HHHhhhhhhhhccccCCCCcEEEE
Confidence            999999999999999885321  112   22322 3456899999999998532  111110       11345689999


Q ss_pred             EeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchH
Q 007151          476 AVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP  524 (616)
Q Consensus       476 i~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~  524 (616)
                      ++|+|.+|+|+++|+++||++++|++||++||+.||++|||.++|.+.|
T Consensus       230 ~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~  278 (282)
T TIGR01809       230 AAYDPWPTPLVAIVSAAGWRVISGLQMLLHQGFAQFEQWTGMPAPREAM  278 (282)
T ss_pred             EeeCCCCCHHHHHHHHCCCEEECcHHHHHHHHHHHHHHHHCCCChHHHH
Confidence            9999999999999999999999999999999999999999998887665

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=100.00  E-value=6e-61  Score=495.07  Aligned_cols=259  Identities=37%  Similarity=0.593  Sum_probs=230.4

Q ss_pred             eEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcc--cHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhh
Q 007151          254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  331 (616)
Q Consensus       254 ~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~--~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~  331 (616)
                      ++|||||+||+||+||.|||++|+++|+|+.|.+++++  +++++++.++.++|+|+|||||||+++++|+|++|+.|++
T Consensus         1 ~~~~viG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~~~~A~~   80 (270)
T TIGR00507         1 KLYGVIGNPIAHSKSPLIHNAFFKQLGLEGPYIAFLVPPDDLEDALSGFFALGFKGANVTSPFKEEAFQFLDEIDERAKL   80 (270)
T ss_pred             CEEEEECCccccccCHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHHhcCCCEEEECcCCHHHHHHHhhhCCHHHHH
Confidence            47999999999999999999999999999999999984  7999999999899999999999999999999999999999


Q ss_pred             hcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE
Q 007151          332 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  411 (616)
Q Consensus       332 iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~n  411 (616)
                      +||||||+++  +|+|+||||||.||+++|++. .          ...++|+++|+|+||+|++++++|++.|++|+++|
T Consensus        81 ~gavNti~~~--~g~l~g~NTD~~G~~~~l~~~-~----------~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~  147 (270)
T TIGR00507        81 AGAVNTLKLE--DGKLVGYNTDGIGLVSDLERL-I----------PLRPNQRVLIIGAGGAARAVALPLLKADCNVIIAN  147 (270)
T ss_pred             hCCceEEEee--CCEEEEEcCCHHHHHHHHHhc-C----------CCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEe
Confidence            9999999976  899999999999999998752 1          23567899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH
Q 007151          412 RTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR  487 (616)
Q Consensus       412 Rt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~  487 (616)
                      |+.++++++++.++..    ..+.++.   ...++|+||||||.||.+..+..+++.+.+.+..+++|++|+|.+|+|++
T Consensus       148 R~~~~~~~la~~~~~~~~~~~~~~~~~---~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~  224 (270)
T TIGR00507       148 RTVSKAEELAERFQRYGEIQAFSMDEL---PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLA  224 (270)
T ss_pred             CCHHHHHHHHHHHhhcCceEEechhhh---cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHH
Confidence            9999999999887531    1222221   23468999999999998765555666667888899999999999999999


Q ss_pred             HHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          488 EAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       488 ~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+++||++++|++||++||+.||++|||+++|.+.|  ++.+
T Consensus       225 ~A~~~G~~~vdG~~Ml~~Qa~~~f~~w~g~~~~~~~~--~~~~  265 (270)
T TIGR00507       225 EAKSLGTKTIDGLGMLVAQAALAFELWTGVEPDIEKM--FEQL  265 (270)
T ss_pred             HHHHCCCeeeCCHHHHHHHHHHHHHHHcCCCCCHHHH--HHHH
Confidence            9999999999999999999999999999999887766  6665

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=5.2e-51  Score=416.53  Aligned_cols=233  Identities=29%  Similarity=0.474  Sum_probs=207.6

Q ss_pred             ccccccCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh----HHHHHhhhC-CCcEEEEeccC
Q 007151           13 KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE----NIKTLIKES-PVPTLFTYRPI   87 (616)
Q Consensus        13 ~~~~~~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~----~l~~l~~~~-~~PiI~T~Rt~   87 (616)
                      |+.......+.|+|||||.+++.+|++++++.+...++|+||||+|+|.+.+..+    .+..+++.. ++|+|||+|++
T Consensus         5 ~~~~~~~~~~~~~i~v~l~~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~~~~~~~~l~~~~~~~PiI~T~R~~   84 (253)
T PRK02412          5 TVKNLVIGEGAPKIIVPIMGKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGKPLLFTFRTA   84 (253)
T ss_pred             EEeceEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEechhhccCCHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            4556666778999999999999999999999877789999999999998754322    334455443 68999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhC-CcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHc
Q 007151           88 WEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS  165 (616)
Q Consensus        88 ~eGG~~~~~~e~~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~  165 (616)
                      +|||.++.++++|+++++.+++.| +||||||+..+.+.++++.. .+++++++|+|||||++||+.+++.+++++|+++
T Consensus        85 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tP~~~~l~~~~~~~~~~  164 (253)
T PRK02412         85 KEGGEIALSDEEYLALIKAVIKSGLPDYIDVELFSGKDVVKEMVAFAHEHGVKVVLSYHDFEKTPPKEEIVERLRKMESL  164 (253)
T ss_pred             hhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeccCChHHHHHHHHHHHHcCCEEEEeeCCCCCCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999 99999999998887777764 3567999999999999999999999999999999


Q ss_pred             CCCEEEEEeecCCHhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhh
Q 007151          166 GADIVKFATTALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL  240 (616)
Q Consensus       166 gaDIvKia~~~~s~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l  240 (616)
                      ||||+|+|+||++.+|++++++++.+     .+.|+|+|+||+.|++||+++++|||++||++++++  +||||+++++|
T Consensus       165 gaDivKia~~a~~~~D~~~ll~~~~~~~~~~~~~P~i~~~MG~~G~~SRil~~~~GS~~ty~~~~~~--sAPGQ~~~~el  242 (253)
T PRK02412        165 GADIVKIAVMPQSEQDVLTLLNATREMKELYADQPLITMSMGKLGRISRLAGEVFGSSWTFASLDKA--SAPGQISVEDL  242 (253)
T ss_pred             CCCEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCchHHHcchhhhCCcceecCCCCC--CCCCCCCHHHH
Confidence            99999999999999999999998743     368999999999999999999999999999999865  99999999999


Q ss_pred             hhhhhcc
Q 007151          241 LDLYNFR  247 (616)
Q Consensus       241 ~~~~~fr  247 (616)
                      +++++..
T Consensus       243 ~~i~~~l  249 (253)
T PRK02412        243 RRILEIL  249 (253)
T ss_pred             HHHHHHh
Confidence            9998754

>COG0710 AroD 3-dehydroquinate dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-50  Score=398.98  Aligned_cols=221  Identities=33%  Similarity=0.541  Sum_probs=197.9

Q ss_pred             CeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCC-ChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCCHHHH
Q 007151           23 PTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNF-NPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENER  100 (616)
Q Consensus        23 ~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~-~~~~~l~~l~~~-~~~PiI~T~Rt~~eGG~~~~~~e~~  100 (616)
                      .++||+|+++.+.+++.++++.++..++|++|||+|+|+.. +..+....+++. ...|+|||+|+.+|||.|++++++|
T Consensus         1 ~~~i~~~v~~~~~~~~~e~~~~~~~~~~Di~E~RvD~l~~~~~~~~~~~~~~e~~~~~~~IfT~R~~~EGG~~~~~~~~~   80 (231)
T COG0710           1 MPKIIVPVVGLDIAELKEQAEKSKELDADIVELRVDLLESNVEVLEVAKALREKDPDKPLIFTFRTVKEGGEFPGSEEEY   80 (231)
T ss_pred             CCEEEEEeecCCHHHHHHHHHHhhccCCCEEEEeechhcccchHHHHHHHHHHhccCCceEEEEeehhhcCCCCCCHHHH
Confidence            47999999999999999999999999999999999999932 223344555554 3679999999999999999999999


Q ss_pred             HHHHHHHHHhC-CcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH
Q 007151          101 VDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI  179 (616)
Q Consensus       101 ~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~  179 (616)
                      ++++..+++.+ ++|||||+..+.+.++++...+ +..++|+|||||++||+++++.+++.+|.+.||||+|+|+||++.
T Consensus        81 i~ll~~la~~~~~d~iDiEl~~~~~~~~~~~~~~-~~~~vI~SyH~F~~TP~~~~i~~~l~km~~~~aDivKiAvm~~~~  159 (231)
T COG0710          81 IELLKKLAELNGPDYIDIELSSPEDDVKEIIKFA-KKHGVIVSYHDFEKTPPLEEIIERLDKMESLGADIVKIAVMPQSK  159 (231)
T ss_pred             HHHHHHHHhhcCCCEEEEEccCcchhHHHHHhcc-ccCCEEEEeccCCCCCcHHHHHHHHHHHHhhCCCeEEEEecCCCH
Confidence            99999999975 9999999999987777776532 233399999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhc---CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhc
Q 007151          180 TDVARVFQITVH---SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  246 (616)
Q Consensus       180 ~D~~~ll~~~~~---~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~f  246 (616)
                      +|++++++++..   .+.|+|+|+||..|++||+++++|||++||++++++  +||||++++++++++..
T Consensus       160 ~DvL~ll~~~~~~~~~~~p~i~i~MG~~G~~SRv~~~~~GS~~tya~~~~~--sAPGQi~v~~l~~~~~~  227 (231)
T COG0710         160 EDVLDLLEATREFKEAEKPVITISMGKTGKISRVAGPVFGSPITYASLDKP--SAPGQISVDELRKILTL  227 (231)
T ss_pred             HHHHHHHHHHHhccccCCCEEEEecCCCCchhhhhHhhhCCceeEeecCCC--CCCCCCCHHHHHHHHHH
Confidence            999999999876   689999999999999999999999999999999875  99999999999998764

>TIGR01093 aroD 3-dehydroquinate dehydratase, type I

Probab=100.00  E-value=7e-50  Score=402.78  Aligned_cols=217  Identities=37%  Similarity=0.604  Sum_probs=191.8

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHH----HHhh-hCCCcEEEEeccCCCCCCCCCCHHH
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIK----TLIK-ESPVPTLFTYRPIWEGGQYDGDENE   99 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~----~l~~-~~~~PiI~T~Rt~~eGG~~~~~~e~   99 (616)
                      +||||+++++.+++..++++. ..|||+||||+|+|.+....+.+.    .++. ..++|+|||+|+++|||.++.++++
T Consensus         1 ~i~v~~~~~~~~~~~~~~~~~-~~~aD~vElRlD~l~~~~~~~~~~~~~~~~~~~~~~~piI~T~R~~~eGG~~~~~~~~   79 (228)
T TIGR01093         1 KIFVPLTAPDLEEALATAEKI-CKGADIVELRVDLLKDPSSNNDVDALIEQLSQLRPDKPLIFTIRTISEGGKFPGNEEE   79 (228)
T ss_pred             CEEEEccCCCHHHHHHHHHHh-ccCCCEEEEEechhcccCcHHHHHHHHHHHHHhcCCCcEEEEECChhhCCCCCCCHHH
Confidence            589999999999999999886 789999999999997654322222    2211 1478999999999999999999999


Q ss_pred             HHHHHHHH-HHhCCcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecC
Q 007151          100 RVDVLRLA-MELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL  177 (616)
Q Consensus       100 ~~~ll~~~-~~~g~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~  177 (616)
                      |++++..+ .+.++||||||++.+++..+++.. .+++++|+|+|||||++||+++++.+++++|.++||||+|+|+||+
T Consensus        80 ~~~ll~~~~~~~~~d~vDiEl~~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tp~~~~l~~~~~~~~~~gaDivKia~~a~  159 (228)
T TIGR01093        80 YLEELKRAADSPGPDFVDIELFLPDDAVKELINIAKKGGTKIIMSYHDFQKTPSWEEIVERLEKALSYGADIVKIAVMAN  159 (228)
T ss_pred             HHHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHCCCEEEEeccCCCCCCCHHHHHHHHHHHHHhCCCEEEEEeccC
Confidence            99999998 567799999999998888777764 3568999999999999999999999999999999999999999999


Q ss_pred             CHhHHHHHHHHhhcC----CCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhh
Q 007151          178 DITDVARVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY  244 (616)
Q Consensus       178 s~~D~~~ll~~~~~~----~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~  244 (616)
                      +.+|++++++++.+.    ++|+|+|+||+.|++||++|++|||++||++++++  +||||+++++|+++|
T Consensus       160 ~~~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~--sApGQ~~~~~l~~~~  228 (228)
T TIGR01093       160 SKEDVLTLLEITNKVDEHADVPLITMSMGDRGKISRVLGAVFGSVLTFGSLGKA--SAPGQISVDDLRELL  228 (228)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChhHhhccccccccceeccCCCC--CCCCCcCHHHHHhhC
Confidence            999999999987543    57999999999999999999999999999999764  999999999999864

Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.

>PF01487 DHquinase_I: Type I 3-dehydroquinase; InterPro: IPR001381 3-dehydroquinate dehydratase (4

Probab=100.00  E-value=1.2e-49  Score=400.13  Aligned_cols=217  Identities=39%  Similarity=0.645  Sum_probs=184.2

Q ss_pred             EEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCCh---hhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHH
Q 007151           27 CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNP---RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDV  103 (616)
Q Consensus        27 cv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~---~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~l  103 (616)
                      ||||+++|.++++++++++...|+|+||||+|+|.+.+.   .+.++.+++..++|+|||+|+++|||.+..++++|+++
T Consensus         1 cv~l~~~~~~~~~~~~~~~~~~~~D~vElRlD~l~~~~~~~~~~~l~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~~~l   80 (224)
T PF01487_consen    1 CVPLTGSTLEELLAELEEAESSGADAVELRLDYLENDSAEDISEQLAELRRSLDLPIIFTVRTKEEGGRFQGSEEEYLEL   80 (224)
T ss_dssp             EEEE--SSHHHHHHHHHHHHHTTTSEEEEEGGGSTTTSHHHHHHHHHHHHHHCTSEEEEE--BGGGTSSBSS-HHHHHHH
T ss_pred             CEeeCCCCHHHHHHHHHHHHhcCCCEEEEEeccccccChHHHHHHHHHHHHhCCCCEEEEecccccCCCCcCCHHHHHHH
Confidence            999999999999999999766699999999999995332   35677888888999999999999999999999999999


Q ss_pred             HHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHhHHH
Q 007151          104 LRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVA  183 (616)
Q Consensus       104 l~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~D~~  183 (616)
                      ++.+++.|+||||||++..++........+.+++++|+|||||++||+++++.+++++|.++||||+|+|+++++.+|++
T Consensus        81 l~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~iI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~  160 (224)
T PF01487_consen   81 LERAIRLGPDYIDIELDLFPDDLKSRLAARKGGTKIILSYHDFEKTPSWEELIELLEEMQELGADIVKIAVMANSPEDVL  160 (224)
T ss_dssp             HHHHHHHTSSEEEEEGGCCHHHHHHHHHHHHTTSEEEEEEEESS---THHHHHHHHHHHHHTT-SEEEEEEE-SSHHHHH
T ss_pred             HHHHHHcCCCEEEEEcccchhHHHHHHHHhhCCCeEEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCHHHHH
Confidence            99999999999999999655544333333468999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcC----CCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhh
Q 007151          184 RVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  245 (616)
Q Consensus       184 ~ll~~~~~~----~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~  245 (616)
                      ++++++.+.    +.|+|+|+||+.|++||+++++|||++||+..++  ++||||+++++++++|+
T Consensus       161 ~l~~~~~~~~~~~~~p~i~~~MG~~G~~SRi~~~~~Gs~~t~~~~~~--~sApGQl~~~~l~~~~~  224 (224)
T PF01487_consen  161 RLLRFTKEFREEPDIPVIAISMGELGRISRILNPIFGSVLTFASAGE--ASAPGQLTLEELREILH  224 (224)
T ss_dssp             HHHHHHHHHHHHTSSEEEEEEETGGGHHHHHCHHHHTBSEEEEBSSS---SSTT-EBHHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCcEEEEEcCCCchhHHHHHhhhcCCcccCCCCC--CCCCCCCcHHHHHHHhC
Confidence            999987653    5899999999999999999999999999997665  49999999999999874

2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. The best studied type I enzyme is from Escherichia coli (gene aroD) and related bacteria where it is a homodimeric protein. In fungi, dehydroquinase is part of a multifunctional enzyme which catalyzes five consecutive steps in the shikimate pathway. A histidine [] is involved in the catalytic mechanism.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 2O7Q_A 2GPT_A 2O7S_A 1SFL_A 2OCZ_A 2OX1_C 1GQN_A 1QFE_B 1L9W_D 3L9C_A ....

>cd00502 DHQase_I Type I 3-dehydroquinase, (3-dehydroquinate dehydratase or DHQase

Probab=100.00  E-value=6.6e-48  Score=387.74  Aligned_cols=215  Identities=37%  Similarity=0.606  Sum_probs=191.6

Q ss_pred             EEEEeecCC-CHHHHHHHHHhhhhcCCCEEEEEecCCCCCC---hhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHH
Q 007151           25 LICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFN---PRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER  100 (616)
Q Consensus        25 ~Icv~l~~~-~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~---~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~  100 (616)
                      +||||+.++ +.++....++...  |+|+||||+|+|.+..   ..++++.+++..+.|+|||+|+++|||.+..++++|
T Consensus         1 ~i~~~i~~~~~~~e~~~~~~~~~--~aD~vElR~D~~~~~~~~~~~~~~~~lr~~~~~piI~T~R~~~eGG~~~~~~~~~   78 (225)
T cd00502           1 KICVPLTGPDLLEEALSLLELLL--GADAVELRVDLLEDPSIDDVAEQLSLLRELTPLPIIFTVRTKSEGGNFEGSEEEY   78 (225)
T ss_pred             CEEEEecCCCCHHHHHHHHHHhc--CCCEEEEEEeeccccchHHHHHHHHHHHHhCCCCEEEEEcccccCCCcCCCHHHH
Confidence            589999999 9999888766532  9999999999998752   245677777767799999999999999999999999


Q ss_pred             HHHHHHHHHhCCcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH
Q 007151          101 VDVLRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI  179 (616)
Q Consensus       101 ~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~  179 (616)
                      +++++.+++.|+||||||++.  +.++++.. .+++++++|+|||+|++||+.+++.+.+++|.+.||||+|+|+||++.
T Consensus        79 ~~ll~~~~~~~~d~vDiEl~~--~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~l~~~~~~~~~~gadivKla~~~~~~  156 (225)
T cd00502          79 LELLEEALKLGPDYVDIELDS--ALLEELINSRKKGNTKIIGSYHDFSGTPSDEELVSRLEKMAALGADIVKIAVMANSI  156 (225)
T ss_pred             HHHHHHHHHHCCCEEEEEecc--hHHHHHHHHHHhCCCEEEEEeccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCH
Confidence            999999999999999999987  33344432 346899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcC----CCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhh
Q 007151          180 TDVARVFQITVHS----QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  245 (616)
Q Consensus       180 ~D~~~ll~~~~~~----~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~  245 (616)
                      +|++++++++.+.    +.|+|+|+||+.|++||++++.|||++||++++++  +||||+++++++++|.
T Consensus       157 ~D~~~ll~~~~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~~t~~~~~~~--sApGQ~~~~~l~~~~~  224 (225)
T cd00502         157 EDNLRLLKFTRQVKNLYDIPLIAINMGELGKLSRILSPVFGSPLTYASLPEP--SAPGQLSVEELKQALS  224 (225)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEEcCCCCchhhccccccCCcccccCCCCC--CCCCCcCHHHHHHHHh
Confidence            9999999987653    46999999999999999999999999999999864  9999999999999875

) Catalyzes the cis-dehydration of 3-dehydroquinate via a covalent imine intermediate to produce dehydroshikimate. Dehydroquinase is the third enzyme in the shikimate pathway, which is involved in the biosynthesis of aromatic amino acids. Type I DHQase exists as a homodimer. Type II 3-dehydroquinase also catalyzes the same overall reaction, but is unrelated in terms of sequence and structure, and utilizes a completely different reaction mechanism.

>PRK13575 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=8.7e-48  Score=388.18  Aligned_cols=219  Identities=24%  Similarity=0.390  Sum_probs=183.0

Q ss_pred             eEEEEeecCCC-HHHH-HHHHHhhhhcCCCEEEEEecCCCCCChhhHHH----HHhhh-CCCcEEEEeccCCCCCCCCCC
Q 007151           24 TLICVPIMGES-VDKM-VVDMGKANASGADLVEIRLDGLKNFNPRENIK----TLIKE-SPVPTLFTYRPIWEGGQYDGD   96 (616)
Q Consensus        24 ~~Icv~l~~~~-~~~~-~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~----~l~~~-~~~PiI~T~Rt~~eGG~~~~~   96 (616)
                      +.|++++.... .++. ..+++.+ ..+||+||||+|+|++.+.. ++.    .+++. .++|+|||+|+++|||.++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vElRlD~l~~~~~~-~~~~~i~~l~~~~~~~p~I~T~Rt~~EGG~~~~~   81 (238)
T PRK13575          4 VEVAATIAPQLSIEETLIQKINHR-IDAIDIIELRIDQWENVTVD-QLAEMITKLKVLQDSFKLLVTYRTKLQGGYGQFT   81 (238)
T ss_pred             eeEeeeeccccccchhHHHHHHhc-CCCCCEEEEEeccccCCCHH-HHHHHHHHHHhhcCCCCEEEEeCChhhCCCCCCC
Confidence            45667777664 5665 4444442 56899999999999875432 333    33332 478999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CcEEEEEccc--chhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151           97 ENERVDVLRLAMELG-ADYIDVELQV--AREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus        97 ~e~~~~ll~~~~~~g-~dyvDIEl~~--~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                      +++|.++++.++..+ +||||||++.  +.+..+++.. .++.++++|+|||||++||+.+++.+++++|.++||||+|+
T Consensus        82 ~~~~~~ll~~~~~~~~~d~vDiE~~~~~~~~~~~~l~~~~~~~~~~vI~S~H~F~~TP~~~~l~~~~~~m~~~gaDi~Ki  161 (238)
T PRK13575         82 NDLYLNLLSDLANINGIDMIDIEWQADIDIEKHQRLITHLQQYNKEVVISHHNFESTPPLDELKFIFFKMQKFNPEYVKL  161 (238)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEcccCCChHHHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence            999999998888765 8999999986  3444555543 35678999999999999999999999999999999999999


Q ss_pred             EeecCCHhHHHHHHHHhhc----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhc
Q 007151          173 ATTALDITDVARVFQITVH----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  246 (616)
Q Consensus       173 a~~~~s~~D~~~ll~~~~~----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~f  246 (616)
                      |+||++.+|+++|++++.+    .+.|+|+|+||+.|++||++++.|||++||++++++  +||||+++++|++++.+
T Consensus       162 Av~~~~~~Dvl~Ll~~~~~~~~~~~~p~i~i~MG~~G~iSRi~~~~~GS~~Tya~l~~~--sAPGQi~v~~l~~i~~~  237 (238)
T PRK13575        162 AVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALSYGCIGEP--QAPGQIHVTDLKAQVTL  237 (238)
T ss_pred             EecCCCHHHHHHHHHHHHHHHhccCCCEEEEeCCCCCchhhcchhhhCCceEecCCCCC--CCCCCCCHHHHHHHHHh
Confidence            9999999999999998654    367999999999999999999999999999999865  99999999999998753

>PRK13576 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=3.9e-46  Score=369.63  Aligned_cols=204  Identities=23%  Similarity=0.296  Sum_probs=173.4

Q ss_pred             CCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 007151           22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (616)
Q Consensus        22 ~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~  101 (616)
                      +.|+||+|+++++.+++..+++.   .|||+||||+|+|++....  +..++++...|+|||+|+++|||.+++++++|+
T Consensus         1 ~~p~i~vpi~~~~~e~i~~~~~~---~~aD~vE~RlD~l~~~~~~--~~~~l~~~~~plI~T~R~~~EGG~~~~~~~~r~   75 (216)
T PRK13576          1 MRPLIVASLPIKKIEDLKLIGNF---LDADLIELRLDYLKDREVS--VIEFLDKYKDKLIVTLRDKAEGGINELDDELKI   75 (216)
T ss_pred             CCCEEEEEeCCCCHHHHHHHHhc---CCCCEEEEEeccccccchh--HHHHHHhcCCCEEEEeCChHHCCCCcCCHHHHH
Confidence            46899999999999999987554   5899999999999875433  233334456799999999999999999999999


Q ss_pred             HHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH-h
Q 007151          102 DVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI-T  180 (616)
Q Consensus       102 ~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~-~  180 (616)
                      ++++.+++.++ ++|||+....+..       ..+.++|+|||||++||+.++|.+++++|.+ ||||+|+|+||++. .
T Consensus        76 ~ll~~~~~~~~-~vDiE~~~a~~~~-------~~~~~vI~S~HdF~~TP~~~eL~~~l~~m~~-gaDI~KiA~mp~~~~~  146 (216)
T PRK13576         76 SLLKELYDKQF-LYDVEASFLQKYN-------VPYDNKIVSIHYFDYLPTSEEVKEIVSKFYE-KAFSVKIAVLGLKGYK  146 (216)
T ss_pred             HHHHHHHHhCC-eEEEEcchhhhcC-------CCCCeEEEEECCCCCCcCHHHHHHHHHHHHh-cCCEEEEEeCCCCchH
Confidence            99999999985 7799998543321       1245799999999999999999999999987 99999999999985 7


Q ss_pred             HHH-HHHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcc
Q 007151          181 DVA-RVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  247 (616)
Q Consensus       181 D~~-~ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr  247 (616)
                      |++ +|++   ..  .+|+|+||+.| +||++++.|||++||++++++  +||||+++++|+++|+..
T Consensus       147 d~l~~Ll~---~~--~~i~~~MG~~G-iSRi~~~~fGS~lTy~~~~~~--sAPGQi~v~~l~~i~~~l  206 (216)
T PRK13576        147 EVLLPLLE---YE--NVTVMPMSVNP-LERIAFSLLGSKLIYSYAIEP--TAQGQLHYKKVKQILNYL  206 (216)
T ss_pred             hHHHHHhc---cc--CccEEEcCCcc-HHHHHHHHhCCeeEEEecCCC--CCCCCccHHHHHHHHHHH
Confidence            775 5554   22  46889999999 999999999999999999865  999999999999998753

>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional

Probab=100.00  E-value=9.9e-43  Score=348.49  Aligned_cols=213  Identities=20%  Similarity=0.298  Sum_probs=177.8

Q ss_pred             ccccc--ccccCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh--hHHHHHhhhCCCcEEEEec
Q 007151           10 SGSKL--VSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR--ENIKTLIKESPVPTLFTYR   85 (616)
Q Consensus        10 ~~~~~--~~~~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~--~~l~~l~~~~~~PiI~T~R   85 (616)
                      ||-|+  ..-.+-...|+|||||+++|.+|++++++.+...|||+||||+|+|.+.+..  ..+...++..++|+|||+|
T Consensus         5 ~~~~~~v~~~~~g~~~p~Icvpi~~~~~ee~~~~~~~~~~~~aDivE~RlD~l~~~~~~~~~~~~~~l~~~~~p~I~T~R   84 (229)
T PRK01261          5 SGDKISIGKFVIGNMQPIVVESIFFKDIKEMKERFKTKVLSDKNLYEIRFDLFHDHSIESEPEIISALNEMDIDYIFTYR   84 (229)
T ss_pred             cCCeEEEeCeEeCCCCcEEEEEeCCCCHHHHHHHHHHhhcCCCCEEEEEeeccCCCChHHHHHHHHHHhhcCCCEEEEEc
Confidence            55554  5777888899999999999999999999888778999999999999875432  1222333445899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHc
Q 007151           86 PIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQAS  165 (616)
Q Consensus        86 t~~eGG~~~~~~e~~~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~  165 (616)
                      +.        ++   .++++.+++.++||||||++...++     ..+..++++|+|||    ||+.+++.+++++|.+.
T Consensus        85 ~~--------~~---~~~l~~a~~~~~d~vDIEl~~~~~~-----~~~~~~~kvIvS~H----tp~~eeL~~~l~~m~~~  144 (229)
T PRK01261         85 GV--------DA---RKYYETAIDKMPPAVDLDINLIGKL-----EFRPRNTMLMVSYH----TNNSDNMPAILDIMNEK  144 (229)
T ss_pred             CC--------CH---HHHHHHHHhhCCCEEEEEcccchhh-----hhhcCCCeEEEEeC----CCCHHHHHHHHHHHHHh
Confidence            52        22   4688888887899999999873332     12457999999999    78889999999999999


Q ss_pred             CCCEEEEEeecCCHhHHHHHHHH----hhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhh
Q 007151          166 GADIVKFATTALDITDVARVFQI----TVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLL  241 (616)
Q Consensus       166 gaDIvKia~~~~s~~D~~~ll~~----~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~  241 (616)
                      ||||+|+|+||++.+|+++++..    ..+.+.|+|+|+||+  ++||++++.|||++||++++++  +||||+++++|+
T Consensus       145 gaDI~KiAvmp~~~~Dvl~~l~~~~~~~~~~~~p~i~isMG~--~iSRi~~~~fGS~lTyas~~~~--sAPGQi~v~~l~  220 (229)
T PRK01261        145 NPDYVKVACNYNDNKKFVDDLQYILMKKDEKYKPIVFIPMGR--EFLRIFSGYYVSDIVYARYDNE--TAPGQPKRDYYE  220 (229)
T ss_pred             CCCEEEEEeCCCChHHHHHHHHHHHHHHhcCCCCEEEEECCc--HHHHHHHHHHCCceEEeeCCCC--CCCCCCCHHHHH
Confidence            99999999999999998877743    334578999999999  9999999999999999999865  999999999999


Q ss_pred             hhhhc
Q 007151          242 DLYNF  246 (616)
Q Consensus       242 ~~~~f  246 (616)
                      ++++.
T Consensus       221 ~~~~~  225 (229)
T PRK01261        221 SAFIK  225 (229)
T ss_pred             HHHHH
Confidence            99864

>KOG0692 consensus Pentafunctional AROM protein [Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-37  Score=324.16  Aligned_cols=487  Identities=17%  Similarity=0.099  Sum_probs=369.8

Q ss_pred             ccCCCCCeEEEEeecCCCHHHHHHHHHh----hhhcCCCEEEEEecCCCCCC-hhhHHHHHhhhCCCcEEEEeccCCCCC
Q 007151           17 GGMRKNPTLICVPIMGESVDKMVVDMGK----ANASGADLVEIRLDGLKNFN-PRENIKTLIKESPVPTLFTYRPIWEGG   91 (616)
Q Consensus        17 ~~~~~~~~~Icv~l~~~~~~~~~~~l~~----~~~~gaD~vElRlD~l~~~~-~~~~l~~l~~~~~~PiI~T~Rt~~eGG   91 (616)
                      ..+-+++..||    .++..+.+..+..    +.+.+++++|.|.|-..+++ +............+|.+++.|.+||||
T Consensus        88 ~taeKas~iV~----~pdir~i~~~i~~pgSKs~snralllaa~~eg~~~~~n~L~sddt~~m~sal~~L~~~~~~we~~  163 (595)
T KOG0692|consen   88 STAEKASEIVL----QPDIREISGLIKLPGSKSLSNRALLLAALSEGTTVVDNLLNSDDTNYMLSALKTLGLNVETWEEN  163 (595)
T ss_pred             hhhhhcchhhc----ChhHHHhhceeeCCCCchhhhhHHHHHHHhccceeccccccccchhhhhhhHHHhccccceecCC
Confidence            34445555555    5555555443221    23344555555555443332 111111222335789999999999999


Q ss_pred             C---CCCCHHHHHHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCC
Q 007151           92 Q---YDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD  168 (616)
Q Consensus        92 ~---~~~~~e~~~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaD  168 (616)
                      .   .++...++-..+...++++.+|+|.|++...++...+-....+..+||.+.|+.+.+|    +..+...+++.|||
T Consensus       164 ~~~vveG~gg~~~~~~~~~~eLylgnagta~r~lt~~aa~v~~k~~~k~~Vl~g~hrmq~rP----i~~LV~~l~q~Gad  239 (595)
T KOG0692|consen  164 NRAVVEGCGGEFSIDSKSDIELYLGNAGTAMRPLTEFAAAVTAKGGNKSYVLDGVHRMQERP----IGDLVVGLKQLGAD  239 (595)
T ss_pred             CEEEEEcCCCeeeechhhhhhhccCccchhhhhHHHHHHHhhcCCCCceEEEecCcccccCC----chHHHHHHHhcCCc
Confidence            8   6777766655567778899999999999888877766555555568999999999999    66667778889999


Q ss_pred             EEEEEeecCCHhHHHHHHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhh--hc
Q 007151          169 IVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLY--NF  246 (616)
Q Consensus       169 IvKia~~~~s~~D~~~ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~--~f  246 (616)
                      |.|++.+...+.|+. ....+....+|+++.-||+.+..+|+++|.++.++||..++..+-|+|+|...-.|.+.|  ++
T Consensus       240 I~~~~~t~~~p~dv~-~~~~~~gg~v~l~g~Vssqy~~~~lm~ap~a~g~vt~~~vdgk~iS~pyv~mt~~lme~fgvn~  318 (595)
T KOG0692|consen  240 IECTLGTNCPPVDVN-ANGGLPGGKVKLSGSVSSQYLTALLMCAPLALGDVTIEIVDGKLISVPYVEMTLKLMERFGVNV  318 (595)
T ss_pred             eEEeccCCCCceeee-ccCCCcCceeeeeeeehhhHHHHHHHhhhhcCCceEEEeecCccccccchhHHHHHHHHhCcCe
Confidence            999999999999997 555667778999999999999999999999999999999998789999999999999999  88


Q ss_pred             ccCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEE-EcccchHHHHhhhccc
Q 007151          247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS-CTIPHKEAAVKCCDEV  325 (616)
Q Consensus       247 r~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~n-VT~P~K~~v~~~lD~l  325 (616)
                      +...+.++.|++.|.|..|+.+|.+||.+|.+--.++.|...-++..-.++..-...++.||+ |+.|+|.++...+|++
T Consensus       319 ~~s~~~~~~y~i~g~~y~~p~~~~ve~dAssa~yfla~aa~tg~~~tV~~~g~~Slqgda~Fa~vl~pmgc~v~qt~~sv  398 (595)
T KOG0692|consen  319 EHSTSWDRFYVIGGQKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDAKFAEVLEPMGCKVSQTENSV  398 (595)
T ss_pred             EecCCCcceEeccCcccCCCCCceeecccccccccceeeeEecceeeeccccceecccccchHhhhccccceeeeecccc
Confidence            999999999999999999999999999999999999988877665544555444556888999 9999999999999999


Q ss_pred             cHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCC---CCCcccccCCcEEEEEccchhHHHHHHHHHH
Q 007151          326 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV---SGGVSSALAGKLFVVIGAGGAGKALAYGAKA  402 (616)
Q Consensus       326 s~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~---~~~~~~~l~~k~vlVlGAGGagrAia~~L~~  402 (616)
                      ++.+.-+||+|++-++..|+...++|||..|-+.++...++...++   ++.. .....+...|+|.|+.+++..+...+
T Consensus       399 tv~gp~~ga~~~~~lr~iD~m~~m~d~~~t~svvA~~~~~~s~gdptti~~~a-s~rvket~r~ia~~~el~klg~~~~E  477 (595)
T KOG0692|consen  399 TVTGPPRGAFGMRHLRAIDVMNKMPDVAMTLSVVALFAGLRSSGDPTTIRDVA-SWRVKETERMIAICTELRKLGATVEE  477 (595)
T ss_pred             cccCCCCCcccceehhhhcccccccchhHhHhHHHHhhcccCCCCCccccccc-chhHHHHHHHHHHHHHHHHhcccccc
Confidence            9999999999999877558899999999999999998755432211   0111 11223567889999999999998888


Q ss_pred             CCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc
Q 007151          403 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI  482 (616)
Q Consensus       403 ~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~  482 (616)
                      .+..+.|++|+ +|.-++++..+.  ..++|  ......+.++-|+++.+  +...+.+.....++....|+|-+|.|+-
T Consensus       478 ~~dg~~v~~~~-~k~lk~ae~~g~--~TydD--hr~am~fsvLA~~~~~~--~~i~d~~ct~kt~p~y~~Vl~~~~~~kl  550 (595)
T KOG0692|consen  478 GSDGYCVITPP-EKKLKLAEIDGS--LTYDD--HRMAMAFSVLAACADVP--ITINDPGCTRKTFPDYFQVLERITKHKL  550 (595)
T ss_pred             cCceEEEeCCc-hHhccchhhccc--ccccc--ccchhhhhHHHhccCCC--ccccCCCccccccchHHHHHHHHhhccc
Confidence            88899999999 887777776421  12222  11234567788888865  4455566666677777889999999998


Q ss_pred             cHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchH
Q 007151          483 TRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP  524 (616)
Q Consensus       483 T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~  524 (616)
                      |.+  ++.+.|....  -+|++-|+.+||+.++|+++|.+.-
T Consensus       551 tga--eple~~a~kn--ssm~vigmr~agkttigk~~akeL~  588 (595)
T KOG0692|consen  551 TGA--EPLESGAIKN--SSMFVIGMREAGKTTIGKPAAKELY  588 (595)
T ss_pred             ccc--Chhhcccccc--ceeeeehhhhcCceecCccchHHhC
Confidence            875  5556555433  6777777777777777776665543

>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []

Probab=99.94  E-value=3.8e-27  Score=200.51  Aligned_cols=81  Identities=41%  Similarity=0.806  Sum_probs=75.1

Q ss_pred             EeccCcccccCHHHHHHHHHHcCCCeeEeccCcc--cHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhhhcce
Q 007151          258 IIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAV  335 (616)
Q Consensus       258 liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~--~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAV  335 (616)
                      |||+||+||+||.|||++|+++|+|+.|.+++++  +++++++.++..+|+|+|||||||+++++|+|++|+.|+.+|||
T Consensus         1 viG~pi~hS~SP~~hn~~f~~~g~~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~~VT~P~K~~~~~~~D~~~~~A~~igAv   80 (83)
T PF08501_consen    1 VIGNPISHSLSPLIHNAAFEALGLDAVYIPFEVEPEDLEDFLDALRAPNFRGLNVTMPHKEAAIPYLDELSPSAKAIGAV   80 (83)
T ss_dssp             EEESSSTT-SHHHHHHHHHHHTTSSEEEEEEETSTTCHHHHHHHHHHTTESEEEE-TTSTTHHGGGSSEE-HHHHHHTS-
T ss_pred             CcCCCcccccCHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHhcCCCCeeeecchHHHHHHHHhccCCHHHHHhCCc
Confidence            7999999999999999999999999999999995  99999999999999999999999999999999999999999999


Q ss_pred             eEE
Q 007151          336 NCI  338 (616)
Q Consensus       336 NTI  338 (616)
                      |||
T Consensus        81 Ntv   83 (83)
T PF08501_consen   81 NTV   83 (83)
T ss_dssp             SEE
T ss_pred             ccC
Confidence            997

Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=99.90  E-value=1.2e-22  Score=210.30  Aligned_cols=183  Identities=25%  Similarity=0.410  Sum_probs=152.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEecc--Cc--ccHHHHHHHhccC-CCCeEEEcccchHHHHh--hhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHL--LV--DDIAKFFQTYSSN-DFAGFSCTIPHKEAAVK--CCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~--~~--~~l~~~~~~l~~~-~~~G~nVT~P~K~~v~~--~lD~ls~  327 (616)
                      .-++| +|-+.+. -.+|+++|+++|++..|.++  ++  +++.+.++.++.. ++.|++||+|||+.+.+  ++|++ +
T Consensus        38 ~i~vg~~~~s~~Y-~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I-~  115 (283)
T PRK14192         38 TILVGDDPASATY-VRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAI-S  115 (283)
T ss_pred             EEEeCCChhHHHH-HHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHHHHHhcc-C
Confidence            44566 4444433 47999999999999999999  55  3788888888644 89999999999999999  99999 9


Q ss_pred             hHhhhcceeEEEEeccCCe------EEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGK------LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGA  400 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~------l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L  400 (616)
                      .++.++++||+ +   +|+      ++|+||| .|+++.|+..           +.+++||+|+|+|+|| +||+++..|
T Consensus       116 ~aKDVdg~n~~-n---~G~l~~~~~~~~p~T~-~gii~~L~~~-----------~i~l~Gk~vvViG~gg~vGkpia~~L  179 (283)
T PRK14192        116 LAKDVDGVTCL-G---FGRMAMGEAAYGSATP-AGIMRLLKAY-----------NIELAGKHAVVVGRSAILGKPMAMML  179 (283)
T ss_pred             HHHhcCCCCcc-c---cCccccCCCcccCCcH-HHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHHH
Confidence            99999999999 3   567      8999999 9999998752           2578999999999999 999999999


Q ss_pred             HHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          401 KAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       401 ~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      .+.|++|++++|.   ++.+++.+               .++|+||||||   .|.    +++.++++++.+|+|+.|+|
T Consensus       180 ~~~gatVtv~~~~---t~~L~~~~---------------~~aDIvI~AtG---~~~----~v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        180 LNANATVTICHSR---TQNLPELV---------------KQADIIVGAVG---KPE----LIKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             HhCCCEEEEEeCC---chhHHHHh---------------ccCCEEEEccC---CCC----cCCHHHcCCCCEEEEEEEee
Confidence            9999999999993   34444332               45899999996   232    57778899999999999998


Q ss_pred             c
Q 007151          481 K  481 (616)
Q Consensus       481 ~  481 (616)
                      .
T Consensus       235 ~  235 (283)
T PRK14192        235 R  235 (283)
T ss_pred             c
Confidence            4

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=99.87  E-value=2.7e-21  Score=182.43  Aligned_cols=152  Identities=42%  Similarity=0.676  Sum_probs=125.3

Q ss_pred             cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCcc--
Q 007151          352 TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA--  428 (616)
Q Consensus       352 TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~~--  428 (616)
                      |||.||.+++++.           +.++++++++|+|+|++|++++..|.+.| .+|++++|+.+++++++++++...  
T Consensus         1 td~~g~~~a~~~~-----------~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~   69 (155)
T cd01065           1 TDGLGFVRALEEA-----------GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIA   69 (155)
T ss_pred             CCHHHHHHHHHhh-----------CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccc
Confidence            8999999998753           13467899999999999999999999997 489999999999999988876421  


Q ss_pred             cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHH
Q 007151          429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAY  508 (616)
Q Consensus       429 ~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~  508 (616)
                      ....+..+ ...++|+||+++|.+..+ .+..++....+++..+++|++|.|..|++.+++++.|+.+++|++||++|++
T Consensus        70 ~~~~~~~~-~~~~~Dvvi~~~~~~~~~-~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~~~q~~  147 (155)
T cd01065          70 IAYLDLEE-LLAEADLIINTTPVGMKP-GDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEMLVYQAA  147 (155)
T ss_pred             eeecchhh-ccccCCEEEeCcCCCCCC-CCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHHHHHHH
Confidence            12223333 246789999999988652 1233454445678899999999999999999999999999999999999999


Q ss_pred             HHHHHHcC
Q 007151          509 EQYERFTG  516 (616)
Q Consensus       509 ~qf~lwtG  516 (616)
                      .||++|||
T Consensus       148 ~~~~~~~~  155 (155)
T cd01065         148 EAFELWTG  155 (155)
T ss_pred             HHHHHhcC
Confidence            99999997

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=99.54  E-value=1.4e-14  Score=134.64  Aligned_cols=99  Identities=42%  Similarity=0.577  Sum_probs=77.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCccEEEEcCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .++++++++|+||||+||+++++|.+.|+ +|+|+||+.+|++++++.++..   ..+++++.+ ...++|+||||||.+
T Consensus         8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~-~~~~~DivI~aT~~~   86 (135)
T PF01488_consen    8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEE-ALQEADIVINATPSG   86 (135)
T ss_dssp             STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCH-HHHTESEEEE-SSTT
T ss_pred             CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHH-HHhhCCeEEEecCCC
Confidence            36889999999999999999999999999 7999999999999999999543   456666654 345799999999999


Q ss_pred             CCCCCCCCccccccccCc----cEEEEEeeCCccc
Q 007151          453 MQPKVDETPIPKHALGHY----ALVFDAVYTPKIT  483 (616)
Q Consensus       453 m~p~~~~~pi~~~~l~~~----~~v~Di~Y~P~~T  483 (616)
                      |.+      +..+.+...    ++++|+.+ |+..
T Consensus        87 ~~~------i~~~~~~~~~~~~~~v~Dla~-Pr~i  114 (135)
T PF01488_consen   87 MPI------ITEEMLKKASKKLRLVIDLAV-PRDI  114 (135)
T ss_dssp             STS------STHHHHTTTCHHCSEEEES-S-S-SB
T ss_pred             Ccc------cCHHHHHHHHhhhhceecccc-CCCC
Confidence            863      444445443    59999986 6543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=99.48  E-value=6.8e-14  Score=141.02  Aligned_cols=137  Identities=23%  Similarity=0.279  Sum_probs=101.7

Q ss_pred             HHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC---eEEEEECC----HHHH-------HHH
Q 007151          355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRT----YDRA-------REL  420 (616)
Q Consensus       355 ~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~---~V~v~nRt----~~ka-------~~l  420 (616)
                      .||..+++..           +.++++++++|+||||+|+++++.|.+.|+   +|+++||+    .+++       +++
T Consensus        10 AG~~~al~~~-----------g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~l   78 (226)
T cd05311          10 AGLLNALKLV-----------GKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEI   78 (226)
T ss_pred             HHHHHHHHHh-----------CCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHH
Confidence            5778877642           246789999999999999999999999997   59999999    5554       556


Q ss_pred             HHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCe-EEcc
Q 007151          421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSG  499 (616)
Q Consensus       421 a~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~-~i~G  499 (616)
                      ++.++....+. ++.+ ...++|+|||+||.||.+.     .....+.+..++||++ +|..|+++++|++.|++ +.+|
T Consensus        79 a~~~~~~~~~~-~l~~-~l~~~dvlIgaT~~G~~~~-----~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G  150 (226)
T cd05311          79 AKETNPEKTGG-TLKE-ALKGADVFIGVSRPGVVKK-----EMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATG  150 (226)
T ss_pred             HHHhccCcccC-CHHH-HHhcCCEEEeCCCCCCCCH-----HHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeC
Confidence            66653221111 2212 2345899999999887541     1112234678899866 99999999999999996 9999


Q ss_pred             HHHHHHHHHHH
Q 007151          500 LEMFIGQAYEQ  510 (616)
Q Consensus       500 l~MLv~Qa~~q  510 (616)
                      ..|++.|+-..
T Consensus       151 ~~~~~~Q~nn~  161 (226)
T cd05311         151 RSDFPNQVNNV  161 (226)
T ss_pred             CCCCcccccee
Confidence            99999998544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.41  E-value=1.7e-12  Score=127.69  Aligned_cols=155  Identities=25%  Similarity=0.264  Sum_probs=115.5

Q ss_pred             EEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-
Q 007151          349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-  426 (616)
Q Consensus       349 G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-  426 (616)
                      |-||-....+..+++.+...       +.++++++++|+|+ |++|++++..|.+.|++|++++|+.++++++++.+.. 
T Consensus         3 G~~~ta~aav~~~~~~l~~~-------~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~   75 (194)
T cd01078           3 GSNTTAAAAVAAAGKALELM-------GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR   75 (194)
T ss_pred             CcHHHHHHHHHHHHHHHHHh-------CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence            56777777777777666431       24678999999996 9999999999999999999999999999999887641 


Q ss_pred             ---cc--cch---hcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHc------
Q 007151          427 ---HA--LSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES------  492 (616)
Q Consensus       427 ---~~--~~~---~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~------  492 (616)
                         ..  .+.   +++.+ ...++|+||++||.|+...    ........+..+++|++|.|..++....++..      
T Consensus        76 ~~~~~~~~~~~~~~~~~~-~~~~~diVi~at~~g~~~~----~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g  150 (194)
T cd01078          76 FGEGVGAVETSDDAARAA-AIKGADVVFAAGAAGVELL----EKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREG  150 (194)
T ss_pred             cCCcEEEeeCCCHHHHHH-HHhcCCEEEECCCCCceec----hhhhcccCceeEEEEccCCCCCCcccccccCCceecCC
Confidence               11  112   22222 3456899999999997511    11112334467999999999989887777655      


Q ss_pred             ----CCeEEccHHHHHHHHHHHHHHHcC
Q 007151          493 ----GATIVSGLEMFIGQAYEQYERFTG  516 (616)
Q Consensus       493 ----G~~~i~Gl~MLv~Qa~~qf~lwtG  516 (616)
                          |.....|+.|.++|+..+ +.|..
T Consensus       151 ~~~~g~~~~~g~~~~~~~~~~a-e~~~~  177 (194)
T cd01078         151 KVPYGAIGVGGLKMKTHRACIA-KLFES  177 (194)
T ss_pred             CeEEEeeccchhHHHHHHHHHH-HHhhc
Confidence                555679999999999877 88883

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=99.32  E-value=8.3e-12  Score=130.26  Aligned_cols=119  Identities=24%  Similarity=0.298  Sum_probs=94.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .++++++++|+|+|++|++++..|...|++|++++|+.++.+... ..+...+.++++.+ ...++|+|||++|.++.+.
T Consensus       147 ~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~~~~~~l~~-~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       147 FTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIPFPLNKLEE-KVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeeecHHHHHH-HhccCCEEEECCChHHhCH
Confidence            478899999999999999999999999999999999988765543 33444444555544 3467899999999865321


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE--ccHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~Gl~ML  503 (616)
                         ..+  +.+++..+++|+.|+|..|+| +.|++.|++++  +|+.+.
T Consensus       225 ---~~l--~~~k~~aliIDlas~Pg~tdf-~~Ak~~G~~a~~~~glPg~  267 (287)
T TIGR02853       225 ---DVL--SKLPKHAVIIDLASKPGGTDF-EYAKKRGIKALLAPGLPGI  267 (287)
T ss_pred             ---HHH--hcCCCCeEEEEeCcCCCCCCH-HHHHHCCCEEEEeCCCCcc
Confidence               111  235677899999999999999 99999999988  999943

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=99.15  E-value=1.4e-10  Score=126.80  Aligned_cols=148  Identities=18%  Similarity=0.229  Sum_probs=105.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC-CcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~-~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ++.+++++|+|+||||++++.+|...|+ +|+|+||+.+++++++++++ ....+++++.+ .+.++|+|||||+... |
T Consensus       178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~-~l~~aDiVI~aT~a~~-~  255 (414)
T PRK13940        178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ-LIKKADIIIAAVNVLE-Y  255 (414)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH-HhccCCEEEECcCCCC-e
Confidence            5789999999999999999999999998 89999999999999999987 55566776655 4667999999999752 2


Q ss_pred             CCCCCcccccccc-CccEEEEEeeCCccc-------------------HHHHHHHHcCCeEEccHHHHHHHHHHHHHHHc
Q 007151          456 KVDETPIPKHALG-HYALVFDAVYTPKIT-------------------RLLREAEESGATIVSGLEMFIGQAYEQYERFT  515 (616)
Q Consensus       456 ~~~~~pi~~~~l~-~~~~v~Di~Y~P~~T-------------------~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwt  515 (616)
                      .     +..+... ...+++|+. .|+.-                   ...+...+..-....-.+.++.+.+..|.-|.
T Consensus       256 v-----i~~~~~~~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iDdl~~i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~  329 (414)
T PRK13940        256 I-----VTCKYVGDKPRVFIDIS-IPQALDPKLGELEQNVYYCVDDINAVIEDNKDKRKYESSKAQKIIVKSLEEYLEKE  329 (414)
T ss_pred             e-----ECHHHhCCCCeEEEEeC-CCCCCCccccCcCCeEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2     1111111 124556664 33321                   01111111122233456778899999999999


Q ss_pred             CC-CCCCchHHHHHHHHHH
Q 007151          516 GL-PGKMNAPHLYKFFVLL  533 (616)
Q Consensus       516 G~-~~p~~~~~l~~~l~~i  533 (616)
                      .. .+.+.+..+++.+++|
T Consensus       330 ~~~~~~p~I~~lr~~~~~i  348 (414)
T PRK13940        330 KAIISNSAIKELFQKADGL  348 (414)
T ss_pred             HhccchHHHHHHHHHHHHH
Confidence            65 5666778899999888

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=99.15  E-value=5.7e-11  Score=128.13  Aligned_cols=153  Identities=24%  Similarity=0.313  Sum_probs=112.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++++++++|+|||.||..+|.+|.+.|+ +|+|+|||.+||++||++++..++.++++.+ .+..+|+||.+|+.. .|.
T Consensus       175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~-~l~~~DvVissTsa~-~~i  252 (414)
T COG0373         175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLE-ALAEADVVISSTSAP-HPI  252 (414)
T ss_pred             ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHH-hhhhCCEEEEecCCC-ccc
Confidence            5889999999999999999999999998 9999999999999999999988888988877 677899999999864 332


Q ss_pred             CCCCccccccc-cCccEEEEEeeCCcccHH---------------HHHHH----HcCCeEEccHHHHHHHHHHHHHHHcC
Q 007151          457 VDETPIPKHAL-GHYALVFDAVYTPKITRL---------------LREAE----ESGATIVSGLEMFIGQAYEQYERFTG  516 (616)
Q Consensus       457 ~~~~pi~~~~l-~~~~~v~Di~Y~P~~T~l---------------l~~A~----~~G~~~i~Gl~MLv~Qa~~qf~lwtG  516 (616)
                      .....+....- +...+++|+. .|++.+-               ++..-    +..-....-.+.++++.+..|..|..
T Consensus       253 i~~~~ve~a~~~r~~~livDia-vPRdie~~v~~l~~v~l~~iDDL~~iv~~n~~~R~~~~~~ae~iIeee~~~~~~~l~  331 (414)
T COG0373         253 ITREMVERALKIRKRLLIVDIA-VPRDVEPEVGELPNVFLYTIDDLEEIVEENLEARKEEAAKAEAIIEEELAEFMEWLK  331 (414)
T ss_pred             cCHHHHHHHHhcccCeEEEEec-CCCCCCccccCcCCeEEEehhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222222111 1225888887 5664221               11111    11223345567778888999999986


Q ss_pred             C-CCCCchHHHHHHHHHH
Q 007151          517 L-PGKMNAPHLYKFFVLL  533 (616)
Q Consensus       517 ~-~~p~~~~~l~~~l~~i  533 (616)
                      . .+...+..+++..+++
T Consensus       332 ~~~~~~~i~~lr~~a~~v  349 (414)
T COG0373         332 KLEVVPTIRALREQAEDV  349 (414)
T ss_pred             HhhchHHHHHHHHHHHHH
Confidence            6 5555667888888877

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=99.13  E-value=1.4e-10  Score=123.27  Aligned_cols=125  Identities=18%  Similarity=0.173  Sum_probs=95.6

Q ss_pred             hhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHH-HCCC-eEE
Q 007151          331 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAK-AKGA-RVV  408 (616)
Q Consensus       331 ~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~-~~G~-~V~  408 (616)
                      ..|++|+++.+  ++.+.|+|||+.|++.+..  +.           ....++++|+|+|++|++.+.+|. ..+. +|+
T Consensus        94 ~tG~~~ai~~d--~~~lT~~RTaa~~~laa~~--la-----------~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~  158 (326)
T TIGR02992        94 RTGLLQALLLD--NGYLTDVRTAAAGAVAARH--LA-----------REDSSVVAIFGAGMQARLQLEALTLVRDIRSAR  158 (326)
T ss_pred             CCCCceEEEcC--CchHHHHHHHHHHHHHHHH--hC-----------CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEE
Confidence            56999999766  7889999999999999864  22           123579999999999999999997 4777 899


Q ss_pred             EEECCHHHHHHHHHHHCC----cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEe
Q 007151          409 IANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       409 v~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      |+||+.++++++++++..    ....++++++ ...++|+||+|||.. .|     .+..++++++..+..+-
T Consensus       159 V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~-av~~aDiVvtaT~s~-~p-----~i~~~~l~~g~~i~~vg  224 (326)
T TIGR02992       159 IWARDSAKAEALALQLSSLLGIDVTAATDPRA-AMSGADIIVTTTPSE-TP-----ILHAEWLEPGQHVTAMG  224 (326)
T ss_pred             EECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-HhccCCEEEEecCCC-Cc-----EecHHHcCCCcEEEeeC
Confidence            999999999999988742    2222344433 345799999999863 22     25556788887777664

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK08291 ectoine utilization protein EutC; Validated

Probab=99.12  E-value=1.4e-10  Score=123.52  Aligned_cols=125  Identities=20%  Similarity=0.181  Sum_probs=94.0

Q ss_pred             hhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCC-eE
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RV  407 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~-~G~-~V  407 (616)
                      ..+|++|||+.+  ++.|.|+|||+.|++.+..  +.           ....++++|+|+|++|++.+.++.. .+. +|
T Consensus        96 ~~tG~~~ai~~d--~~~lt~~rT~a~~~~a~~~--la-----------~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V  160 (330)
T PRK08291         96 ARTGLVEALLLD--NGYLTDVRTAAAGAVAARH--LA-----------REDASRAAVIGAGEQARLQLEALTLVRPIREV  160 (330)
T ss_pred             CCCCceEEEEcC--CchHHHHHHHHHHHHHHHH--hC-----------CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEE
Confidence            467999999765  7899999999999999864  22           1235789999999999999999986 566 89


Q ss_pred             EEEECCHHHHHHHHHHHCC----cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          408 VIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       408 ~v~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      +|+||+.++++++++++..    ....++++++ ...++|+||+|||.. .|     .+..++++++..+..+
T Consensus       161 ~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~-al~~aDiVi~aT~s~-~p-----~i~~~~l~~g~~v~~v  226 (330)
T PRK08291        161 RVWARDAAKAEAYAADLRAELGIPVTVARDVHE-AVAGADIIVTTTPSE-EP-----ILKAEWLHPGLHVTAM  226 (330)
T ss_pred             EEEcCCHHHHHHHHHHHhhccCceEEEeCCHHH-HHccCCEEEEeeCCC-Cc-----EecHHHcCCCceEEee
Confidence            9999999999999987742    2222333333 345689999999964 22     2444567777666665

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=99.09  E-value=2.4e-10  Score=119.90  Aligned_cols=120  Identities=24%  Similarity=0.281  Sum_probs=93.4

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.+++++|+|+|++|++++..|...|++|++++|+.++. +.++.++.....++++.+ ...++|+||||+|..+.. 
T Consensus       148 ~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~~G~~~~~~~~l~~-~l~~aDiVI~t~p~~~i~-  224 (296)
T PRK08306        148 ITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHL-ARITEMGLSPFHLSELAE-EVGKIDIIFNTIPALVLT-  224 (296)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeeecHHHHHH-HhCCCCEEEECCChhhhh-
Confidence            35678999999999999999999999999999999998764 344556655555555544 356799999999865321 


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE--ccHHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFI  504 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~Gl~MLv  504 (616)
                        ...+  ..+++..+++|+.|.|..|.| +.|+++|++++  +|+.+.+
T Consensus       225 --~~~l--~~~~~g~vIIDla~~pggtd~-~~a~~~Gv~~~~~~~lpg~v  269 (296)
T PRK08306        225 --KEVL--SKMPPEALIIDLASKPGGTDF-EYAEKRGIKALLAPGLPGKV  269 (296)
T ss_pred             --HHHH--HcCCCCcEEEEEccCCCCcCe-eehhhCCeEEEEECCCCccC
Confidence              1111  235678999999999999998 88999999988  8988655

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=99.09  E-value=8.4e-11  Score=129.28  Aligned_cols=204  Identities=24%  Similarity=0.282  Sum_probs=140.7

Q ss_pred             chHHHHhhhccccHhHhhhcceeEEEEe-----ccCCeEEEEecCHHHHHHH-----HHhhhcccCCCCCCcccccCCcE
Q 007151          314 HKEAAVKCCDEVDTVAKSIGAVNCIIRR-----QSDGKLFGYNTDYVGAISA-----IEDGLRGRLNVSGGVSSALAGKL  383 (616)
Q Consensus       314 ~K~~v~~~lD~ls~~A~~iGAVNTIv~~-----~~dg~l~G~NTD~~G~~~~-----L~~~l~~~~~~~~~~~~~l~~k~  383 (616)
                      =+..|+..+++....|+..|++|+++..     -.-++..+++|+..+.-.+     ++.....        ..++.+++
T Consensus       113 GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~i~~~~~Sv~~~Av~~a~~~--------~~~~~~~~  184 (423)
T PRK00045        113 GEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETGIGAGAVSVASAAVELAKQI--------FGDLSGKK  184 (423)
T ss_pred             CChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcCCCCCCcCHHHHHHHHHHHh--------hCCccCCE
Confidence            3667899999999999999999998721     0135677888885553222     2211000        01467899


Q ss_pred             EEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          384 FVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++|+|+|++|+.++..|...|+ +|+++||+.++++++++.++....+++++.+ ...++|+||+|||.. .|.     +
T Consensus       185 vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVI~aT~s~-~~~-----i  257 (423)
T PRK00045        185 VLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPE-ALAEADIVISSTGAP-HPI-----I  257 (423)
T ss_pred             EEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHH-HhccCCEEEECCCCC-CcE-----E
Confidence            9999999999999999999998 8999999999999999998765555555544 346789999999854 221     2


Q ss_pred             ccccc--------cCccEEEEEeeCCcccH---------------HHHHHHH----cCCeEEccHHHHHHHHHHHHHHHc
Q 007151          463 PKHAL--------GHYALVFDAVYTPKITR---------------LLREAEE----SGATIVSGLEMFIGQAYEQYERFT  515 (616)
Q Consensus       463 ~~~~l--------~~~~~v~Di~Y~P~~T~---------------ll~~A~~----~G~~~i~Gl~MLv~Qa~~qf~lwt  515 (616)
                      ..+++        ....+++|+. .|++..               -+++..+    ..-..+.-.+-++.+.+..|.-|.
T Consensus       258 ~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~f~~~~  336 (423)
T PRK00045        258 GKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLYDVDDLQEIVEENLAQRQEAAEKAEAIVEEEVAEFMEWL  336 (423)
T ss_pred             cHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEEEHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222        1235788887 454311               0111111    122234456677889999999998


Q ss_pred             CC-CCCCchHHHHHHHHHH
Q 007151          516 GL-PGKMNAPHLYKFFVLL  533 (616)
Q Consensus       516 G~-~~p~~~~~l~~~l~~i  533 (616)
                      .. .+...+..+++.+++|
T Consensus       337 ~~~~~~p~I~~lr~~~~~i  355 (423)
T PRK00045        337 RSLEVVPTIRALREQAEEI  355 (423)
T ss_pred             HhccchHHHHHHHHHHHHH
Confidence            65 5666778899999888

>PLN00203 glutamyl-tRNA reductase

Probab=98.69  E-value=5.1e-08  Score=109.31  Aligned_cols=152  Identities=19%  Similarity=0.236  Sum_probs=103.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCccEEEEcCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ++.+++++|+|+|++|++++..|...|+ +|+++||+.++++.+++.++..   ..+++++.+ ...++|+||+||+.+.
T Consensus       263 ~l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~-al~~aDVVIsAT~s~~  341 (519)
T PLN00203        263 SHASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA-CAAEADVVFTSTSSET  341 (519)
T ss_pred             CCCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH-HHhcCCEEEEccCCCC
Confidence            3778999999999999999999999998 8999999999999999988531   234444433 3567899999998653


Q ss_pred             CCCCCCCccccccc------cCccEEEEEeeCCccc-H------------------HHHHHHHcCCeEEccHHHHHHHHH
Q 007151          454 QPKVDETPIPKHAL------GHYALVFDAVYTPKIT-R------------------LLREAEESGATIVSGLEMFIGQAY  508 (616)
Q Consensus       454 ~p~~~~~pi~~~~l------~~~~~v~Di~Y~P~~T-~------------------ll~~A~~~G~~~i~Gl~MLv~Qa~  508 (616)
                       |......+.. ..      ....+++|+. .|++- |                  .....++..-....-.+-++.+.+
T Consensus       342 -pvI~~e~l~~-~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lydiDdL~~i~~~n~~~R~~~~~~Ae~II~ee~  418 (519)
T PLN00203        342 -PLFLKEHVEA-LPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYNVDDLKEVVAANKEDRLRKAMEAQTIIREES  418 (519)
T ss_pred             -CeeCHHHHHH-hhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEEeccHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence             3211111100 00      0124677776 34421 1                  111111112223445667788899


Q ss_pred             HHHHHHcCC-CCCCchHHHHHHHHHH
Q 007151          509 EQYERFTGL-PGKMNAPHLYKFFVLL  533 (616)
Q Consensus       509 ~qf~lwtG~-~~p~~~~~l~~~l~~i  533 (616)
                      ..|.-|... ++.+.+..|++.+++|
T Consensus       419 ~~F~~w~~~~~~~p~I~~lr~~~~~i  444 (519)
T PLN00203        419 KNFEAWRDSLETVPTIKKLRSYAERI  444 (519)
T ss_pred             HHHHHHHHhccchHHHHHHHHHHHHH
Confidence            999999976 5667788899999988

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.67  E-value=5e-08  Score=107.25  Aligned_cols=148  Identities=25%  Similarity=0.394  Sum_probs=104.9

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .+.+++++|+|+|.+|+.++..|...|+ +|+++||+.++++++++.++...++++++.+ ...++|+||+||+.. .|.
T Consensus       177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~-~l~~aDvVi~aT~s~-~~i  254 (417)
T TIGR01035       177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEE-YLAEADIVISSTGAP-HPI  254 (417)
T ss_pred             CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHH-HHhhCCEEEECCCCC-Cce
Confidence            4678999999999999999999999996 9999999999999999998765555555544 345789999999854 221


Q ss_pred             CCCCcccccccc-------CccEEEEEeeCCcccHH---------------HHHHHHc----CCeEEccHHHHHHHHHHH
Q 007151          457 VDETPIPKHALG-------HYALVFDAVYTPKITRL---------------LREAEES----GATIVSGLEMFIGQAYEQ  510 (616)
Q Consensus       457 ~~~~pi~~~~l~-------~~~~v~Di~Y~P~~T~l---------------l~~A~~~----G~~~i~Gl~MLv~Qa~~q  510 (616)
                           +..+++.       ...+++|+. .|++..-               +++..+.    .-....-.+-++.+.+..
T Consensus       255 -----i~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~vDdl~~~~~~n~~~r~~~~~~a~~ii~~~~~~  328 (417)
T TIGR01035       255 -----VSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYDVDDLQPVVEENLAERREEAEKAEEIVEEETAE  328 (417)
T ss_pred             -----EcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEEHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence                 2222221       124788887 5653211               1111111    112234556678888999


Q ss_pred             HHHHcCC-CCCCchHHHHHHHHHH
Q 007151          511 YERFTGL-PGKMNAPHLYKFFVLL  533 (616)
Q Consensus       511 f~lwtG~-~~p~~~~~l~~~l~~i  533 (616)
                      |.-|... .+.+.+..+++.+++|
T Consensus       329 f~~w~~~~~~~p~I~~lr~~~~~i  352 (417)
T TIGR01035       329 FKQWLRSLEVEPTIKALRSLAEIV  352 (417)
T ss_pred             HHHHHHhccchHHHHHHHHHHHHH
Confidence            9999975 5666778899999888

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.50  E-value=5.2e-06  Score=86.30  Aligned_cols=183  Identities=20%  Similarity=0.298  Sum_probs=116.4

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.--. -.+..+++|++.....++-    +++...++.+ .++++.|+-|-.|+-..+  ...++.+++
T Consensus        37 ii~vg~~~as~~Yv~~-k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p  115 (286)
T PRK14175         37 VILVGNDGASQSYVRS-KKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINP  115 (286)
T ss_pred             EEEeCCCHHHHHHHHH-HHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc
Confidence            34456 5555544433 3456789999988777764    3566667666 467899999999964322  112222222


Q ss_pred             hHhhhcceeEEEEeccCCeEE-E----EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~-G----~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~  401 (616)
                      . +-+-..+..    +-|+++ |    .----.|++..|+..           +.+++||+|+|+|.|+ +|+.++..|.
T Consensus       116 ~-KDVDGl~~~----n~g~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~l~Gk~vvVIGrs~~VG~pla~lL~  179 (286)
T PRK14175        116 E-KDVDGFHPI----NIGKLYIDEQTFVPCTPLGIMEILKHA-----------DIDLEGKNAVVIGRSHIVGQPVSKLLL  179 (286)
T ss_pred             c-cCcccCCcc----chHhHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCchhHHHHHHHHH
Confidence            1 111111110    001111 1    112245667766542           2578999999999998 9999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      ..|++|++++|....   +.+               ...++|+||+|+|.   |+    .+..++++++.+|+|+-.+|
T Consensus       180 ~~gatVtv~~s~t~~---l~~---------------~~~~ADIVIsAvg~---p~----~i~~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        180 QKNASVTILHSRSKD---MAS---------------YLKDADVIVSAVGK---PG----LVTKDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HCCCeEEEEeCCchh---HHH---------------HHhhCCEEEECCCC---Cc----ccCHHHcCCCcEEEEcCCCc
Confidence            999999999885321   111               23458999999985   22    35567788899999999876

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.45  E-value=8.4e-07  Score=95.67  Aligned_cols=114  Identities=28%  Similarity=0.372  Sum_probs=84.2

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCc----ccchhccccc--CCCCccEEEEcCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH----ALSLADLENF--NPEDGMILANTTSIGMQ  454 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~----~~~~~~l~~~--~~~~~divInat~~gm~  454 (616)
                      ++++|+|+|++|+++|.-|++.| .+|++++|+.++++++++..+.+    .++..+...+  .+.+.|+|||+.|.-..
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~   81 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD   81 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence            57999999999999999999999 59999999999999998775322    2343333221  35567999999995321


Q ss_pred             CCCCCCccccccccCccEEEEEeeCCcc-cHHHHHHHHcCCeEEccH
Q 007151          455 PKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVSGL  500 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~Gl  500 (616)
                           ..+...+++.+.-++|+.|.+.. =.+-.+|+++|..++.|.
T Consensus        82 -----~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~  123 (389)
T COG1748          82 -----LTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGC  123 (389)
T ss_pred             -----HHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEccc
Confidence                 12444567777889999997655 345567788998887543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.35  E-value=7.7e-07  Score=94.16  Aligned_cols=102  Identities=36%  Similarity=0.501  Sum_probs=74.6

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      +.+++++|+|+|.+|+.++..|...|+ +|+++||+.+++++++++++....+++++.+ ...++|+||.|||.......
T Consensus       176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~-~l~~aDvVi~at~~~~~~~~  254 (311)
T cd05213         176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLE-LLNEADVVISATGAPHYAKI  254 (311)
T ss_pred             ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHH-HHhcCCEEEECCCCCchHHH
Confidence            678999999999999999999999887 8999999999999999999876555555544 34568999999996432000


Q ss_pred             CCCccccccccCccEEEEEeeCCccc
Q 007151          458 DETPIPKHALGHYALVFDAVYTPKIT  483 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di~Y~P~~T  483 (616)
                      ... ..........+++|+. .|+..
T Consensus       255 ~~~-~~~~~~~~~~~viDla-vPrdi  278 (311)
T cd05213         255 VER-AMKKRSGKPRLIVDLA-VPRDI  278 (311)
T ss_pred             HHH-HHhhCCCCCeEEEEeC-CCCCC
Confidence            000 0001112457899998 67653

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.35  E-value=1.3e-06  Score=89.87  Aligned_cols=78  Identities=24%  Similarity=0.368  Sum_probs=61.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--------cchhccccc---------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--------LSLADLENF---------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--------~~~~~l~~~---------~~  439 (616)
                      ...+++++|+|| +|+|+++|..|++.|++|+++.|+.+|.+++++++....        +|+.+.++.         ..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            356899999999 799999999999999999999999999999999886422        233322110         22


Q ss_pred             CCccEEEEcCCCCCCC
Q 007151          440 EDGMILANTTSIGMQP  455 (616)
Q Consensus       440 ~~~divInat~~gm~p  455 (616)
                      ...|++||++|.|...
T Consensus        83 ~~IdvLVNNAG~g~~g   98 (265)
T COG0300          83 GPIDVLVNNAGFGTFG   98 (265)
T ss_pred             CcccEEEECCCcCCcc
Confidence            3689999999998654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=98.31  E-value=6e-06  Score=81.93  Aligned_cols=151  Identities=18%  Similarity=0.199  Sum_probs=98.9

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  433 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~  433 (616)
                      +.|...+++..+....+     +.+++||+++|+|.|.+|+.+++.|.+.|++|++++++.++.+++++.++...++.++
T Consensus         6 g~Gv~~~~~~~~~~~~~-----~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~   80 (200)
T cd01075           6 AYGVFLGMKAAAEHLLG-----TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEE   80 (200)
T ss_pred             HHHHHHHHHHHHHHhcC-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchh
Confidence            46777777765543211     2578999999999999999999999999999999999999999998887655444443


Q ss_pred             ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccH-HHHHHHHcCCeEEccHHHHHHHHHHHHH
Q 007151          434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR-LLREAEESGATIVSGLEMFIGQAYEQYE  512 (616)
Q Consensus       434 l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~-ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~  512 (616)
                      +..   .++|++++++..+..   +...+  ..++ ...+++-.-+|...+ --+.-+++|+.+++..-...--.+.++.
T Consensus        81 l~~---~~~Dv~vp~A~~~~I---~~~~~--~~l~-~~~v~~~AN~~~~~~~~~~~L~~~Gi~~~Pd~~~NaGGv~~~~~  151 (200)
T cd01075          81 IYS---VDADVFAPCALGGVI---NDDTI--PQLK-AKAIAGAANNQLADPRHGQMLHERGILYAPDYVVNAGGLINVAD  151 (200)
T ss_pred             hcc---ccCCEEEeccccccc---CHHHH--HHcC-CCEEEECCcCccCCHhHHHHHHHCCCEEeCceeeeCcCceeehh
Confidence            322   368999988874421   11111  1232 467788777765422 2233357898887632221112334667


Q ss_pred             HHcCCC
Q 007151          513 RFTGLP  518 (616)
Q Consensus       513 lwtG~~  518 (616)
                      .|.+..
T Consensus       152 e~~~~~  157 (200)
T cd01075         152 ELYGGN  157 (200)
T ss_pred             HHhCCc
Confidence            777753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.29  E-value=4.4e-05  Score=79.31  Aligned_cols=177  Identities=19%  Similarity=0.261  Sum_probs=114.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++...++.+ .++++.|+-|-.|+...    +|+   . 
T Consensus        38 ii~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~----~~~---~-  108 (285)
T PRK10792         38 VVLVGSDPASQVYV-ASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAH----IDN---V-  108 (285)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC----CCH---H-
Confidence            33456 44443333 333557899999987776653    3677777777 46789999999997532    111   1 


Q ss_pred             hhhcceeEEEEeccCCeEEEE-------------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGY-------------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~-------------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrA  395 (616)
                      +.+.+++--. + -|| ++-+             ---..|++..|+..           +.+++||+++|+|-|. .|+.
T Consensus       109 ~i~~~I~p~K-D-VDG-l~~~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVG~P  174 (285)
T PRK10792        109 KVLERIHPDK-D-VDG-FHPYNVGRLAQRIPLLRPCTPRGIMTLLERY-----------GIDTYGLNAVVVGASNIVGRP  174 (285)
T ss_pred             HHHhccCccc-c-cCc-cChhhHhHHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHH
Confidence            1222222111 1 021 1111             12346777766542           2678999999999987 9999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|.+.|+.|+++.+....                 +.+ ...++|+||+|+|.   |.    .+..++++++.+|+|
T Consensus       175 la~lL~~~~atVtv~hs~T~~-----------------l~~-~~~~ADIvi~avG~---p~----~v~~~~vk~gavVID  229 (285)
T PRK10792        175 MSLELLLAGCTVTVCHRFTKN-----------------LRH-HVRNADLLVVAVGK---PG----FIPGEWIKPGAIVID  229 (285)
T ss_pred             HHHHHHHCCCeEEEEECCCCC-----------------HHH-HHhhCCEEEEcCCC---cc----cccHHHcCCCcEEEE
Confidence            999999999999999875221                 111 23458999999984   22    356678999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.++
T Consensus       230 vGin~  234 (285)
T PRK10792        230 VGINR  234 (285)
T ss_pred             ccccc
Confidence            99775

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.24  E-value=2.7e-06  Score=90.56  Aligned_cols=110  Identities=27%  Similarity=0.404  Sum_probs=79.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHC-CcccchhcccccCCCCccEEEEcCCCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~-~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .++++|+|+|+|| |.+|+.++..|... |+ ++++++|+.++++.+++++. ....+++   + ...++|+||.+|+..
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~---~-~l~~aDiVv~~ts~~  226 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLE---E-ALPEADIVVWVASMP  226 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHH---H-HHccCCEEEECCcCC
Confidence            4688999999999 78999999999864 76 99999999999999998875 2333332   3 345689999999864


Q ss_pred             CCCCCCCCccccccccCccEEEEEeeCCcc-cHHHHHHHHcCCeEEcc
Q 007151          453 MQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVSG  499 (616)
Q Consensus       453 m~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~G  499 (616)
                      ...     .+..+.+.+..+++|+.+ |++ -|-   ..+-|+.+++|
T Consensus       227 ~~~-----~I~~~~l~~~~~viDiAv-PRDVd~~---v~~~~V~v~~g  265 (340)
T PRK14982        227 KGV-----EIDPETLKKPCLMIDGGY-PKNLDTK---VQGPGIHVLKG  265 (340)
T ss_pred             cCC-----cCCHHHhCCCeEEEEecC-CCCCCcc---cCCCCEEEEeC
Confidence            221     144455677899999997 543 221   12367778764

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.23  E-value=3.8e-05  Score=80.35  Aligned_cols=214  Identities=19%  Similarity=0.180  Sum_probs=130.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+.- ..-.+..+++|++..-..++-    +++.+.++.+ .++.+.|+-|-+|+-.    ++|+   . 
T Consensus        38 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~----~i~~---~-  108 (301)
T PRK14194         38 VILVGNDPASQVYV-RNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPA----HIDE---A-  108 (301)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCC----CCCH---H-
Confidence            44556 34433332 233557889999987776653    3577777777 4778999999999742    2221   1 


Q ss_pred             hhhcceeEEEEeccCC-------eE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  396 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAi  396 (616)
                      +.+.+++--. + -||       ++ .|.    ---..|++.-|+..           +.+++||+++|+|.| -+|+.+
T Consensus       109 ~i~~~I~p~K-D-VDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~V~vIG~s~ivG~Pm  175 (301)
T PRK14194        109 RVLQAINPLK-D-VDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDT-----------CGDLTGKHAVVIGRSNIVGKPM  175 (301)
T ss_pred             HHHhccCchh-c-cCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCCccHHHH
Confidence            1122222211 0 011       11 121    11256777766542           368899999999997 799999


Q ss_pred             HHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          397 AYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       397 a~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      +..|.+.|++|++++|+....+++                  ..++|+||.++|..  +     .+...+++++.+|+|+
T Consensus       176 A~~L~~~gatVtv~~~~t~~l~e~------------------~~~ADIVIsavg~~--~-----~v~~~~ik~GaiVIDv  230 (301)
T PRK14194        176 AALLLQAHCSVTVVHSRSTDAKAL------------------CRQADIVVAAVGRP--R-----LIDADWLKPGAVVIDV  230 (301)
T ss_pred             HHHHHHCCCEEEEECCCCCCHHHH------------------HhcCCEEEEecCCh--h-----cccHhhccCCcEEEEe
Confidence            999999999999998864322221                  23479999888742  1     2445678889999999


Q ss_pred             eeCCcc----------cHHHHHHHH-cCCeE-Ec-c-----HHHHHHHHHHHHHHHcCC
Q 007151          477 VYTPKI----------TRLLREAEE-SGATI-VS-G-----LEMFIGQAYEQYERFTGL  517 (616)
Q Consensus       477 ~Y~P~~----------T~ll~~A~~-~G~~~-i~-G-----l~MLv~Qa~~qf~lwtG~  517 (616)
                      ..++..          -.| +.+++ .++.+ ++ |     ..||++..+.+.+.|...
T Consensus       231 gin~~~~~g~~kl~GDvdf-~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~~  288 (301)
T PRK14194        231 GINRIDDDGRSRLVGDVDF-DSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAHA  288 (301)
T ss_pred             cccccCCCCCcceecccch-HHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence            877521          222 22332 23221 33 3     457777777777766644

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=98.22  E-value=8.2e-06  Score=78.71  Aligned_cols=93  Identities=23%  Similarity=0.287  Sum_probs=68.3

Q ss_pred             cccCCcEEEEEccchh-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGA-GKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGa-grAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      .++++|+++|+|+|++ |+.++..|.+.|++|++++|+.+...+                  ...++|+||+||+...  
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------~l~~aDiVIsat~~~~--   99 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------HTKQADIVIVAVGKPG--   99 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------HHhhCCEEEEcCCCCc--
Confidence            4689999999999996 888999999999999999998543221                  2345899999999631  


Q ss_pred             CCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHH
Q 007151          456 KVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~  501 (616)
                           .+..+.+++..+++|+.- |+...      +.+.++..+.+
T Consensus       100 -----ii~~~~~~~~~viIDla~-prdvd------~~~~~~~G~~d  133 (168)
T cd01080         100 -----LVKGDMVKPGAVVIDVGI-NRVPD------KSGGKLVGDVD  133 (168)
T ss_pred             -----eecHHHccCCeEEEEccC-CCccc------ccCCCeeCCcC
Confidence                 255566777899999984 54432      22335555554

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06141 ornithine cyclodeaminase; Validated

Probab=98.19  E-value=8.9e-06  Score=86.24  Aligned_cols=114  Identities=20%  Similarity=0.186  Sum_probs=77.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCccEEEEcCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ..++++|+|+|++|+..+.++.. .+. +|+|+||++++++++++++..   .....++..+ ...++|+||++|+.. .
T Consensus       124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~-av~~aDIVi~aT~s~-~  201 (314)
T PRK06141        124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEA-AVRQADIISCATLST-E  201 (314)
T ss_pred             CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHH-HHhcCCEEEEeeCCC-C
Confidence            46899999999999999987776 565 899999999999999998742   1222233333 345689999999954 2


Q ss_pred             CCCCCCccccccccCccEEEEEeeCCc--ccHHHHHHHHcCCeEEccHH
Q 007151          455 PKVDETPIPKHALGHYALVFDAVYTPK--ITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y~P~--~T~ll~~A~~~G~~~i~Gl~  501 (616)
                      |     .+..++++++. ++|+++...  ...+-.+..+++..+++-.+
T Consensus       202 p-----vl~~~~l~~g~-~i~~ig~~~~~~~El~~~~~~~a~~~vD~~~  244 (314)
T PRK06141        202 P-----LVRGEWLKPGT-HLDLVGNFTPDMRECDDEAIRRASVYVDTRA  244 (314)
T ss_pred             C-----EecHHHcCCCC-EEEeeCCCCcccccCCHHHHhcCcEEEcCHH
Confidence            2     14456777766 788887532  11122233445556677664

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.12  E-value=7.6e-06  Score=82.42  Aligned_cols=73  Identities=34%  Similarity=0.494  Sum_probs=59.7

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc----cchhcc----------cccCCCCc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA----LSLADL----------ENFNPEDG  442 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~----~~~~~l----------~~~~~~~~  442 (616)
                      +++|.++|+|| +|+|.|+|+.|++.|++|.+..|..++.++++.+++. ..    +|+.|.          .+ ...+.
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~-~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPE-EFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHH-hhCcc
Confidence            45789999999 5999999999999999999999999999999999983 21    233222          12 45679


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||++++.
T Consensus        83 DiLvNNAGl~   92 (246)
T COG4221          83 DILVNNAGLA   92 (246)
T ss_pred             cEEEecCCCC
Confidence            9999999974

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.11  E-value=1e-05  Score=87.78  Aligned_cols=99  Identities=24%  Similarity=0.320  Sum_probs=72.3

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcccccCCCCccEEEEcCCC-CC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLENFNPEDGMILANTTSI-GM  453 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l~~~~~~~~divInat~~-gm  453 (616)
                      +.+++|+|+|+|++|+.++..+..+|++|++++|+.++++.++..++...    .+.+++.+ ...++|+||||++. +.
T Consensus       165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~-~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIED-AVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHH-HHccCCEEEEccccCCC
Confidence            45678999999999999999999999999999999999988887776421    12233333 34568999999965 32


Q ss_pred             -CCCCCCCccccc---cccCccEEEEEeeCCcc
Q 007151          454 -QPKVDETPIPKH---ALGHYALVFDAVYTPKI  482 (616)
Q Consensus       454 -~p~~~~~pi~~~---~l~~~~~v~Di~Y~P~~  482 (616)
                       .|.    .+..+   .++++.+++|+.+.|..
T Consensus       244 ~~p~----lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       244 KAPK----LVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             CCCc----CcCHHHHhcCCCCCEEEEEecCCCC
Confidence             121    12222   35677899999987553

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.05  E-value=4.6e-05  Score=79.20  Aligned_cols=181  Identities=23%  Similarity=0.308  Sum_probs=115.1

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|.+.+.- ..-.+.++++|++.....++-    +++...++.+ .+.++.|+-|-.|+...+  ...++.+++
T Consensus        43 ii~vg~d~aS~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p  121 (287)
T PRK14176         43 TILVGDDPASKMYV-RLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDP  121 (287)
T ss_pred             EEEECCCcchHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc
Confidence            44556 44444333 233557899999988777764    3577777777 467899999999975322  112222221


Q ss_pred             h--HhhhcceeEEEEeccCCeEE-EE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHH
Q 007151          328 V--AKSIGAVNCIIRRQSDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYG  399 (616)
Q Consensus       328 ~--A~~iGAVNTIv~~~~dg~l~-G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~  399 (616)
                      .  +.-+...|.       |++. |.    ----.|++..|+..           +.+++||+|+|+|.|. .|+-++..
T Consensus       122 ~KDVDGl~~~N~-------g~l~~g~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrs~iVGkPla~l  183 (287)
T PRK14176        122 AKDADGFHPYNM-------GKLMIGDEGLVPCTPHGVIRALEEY-----------GVDIEGKNAVIVGHSNVVGKPMAAM  183 (287)
T ss_pred             cccccccChhhh-------hhHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCcccHHHHHHH
Confidence            1  000011110       1111 11    12346777766542           2678999999999987 99999999


Q ss_pred             HHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          400 AKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       400 L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      |...|+.|+++......   +              .+ ...++|+||+|++.   |.    .+..++++++.+|+|+-.+
T Consensus       184 L~~~~atVtv~hs~T~~---l--------------~~-~~~~ADIvv~AvG~---p~----~i~~~~vk~gavVIDvGin  238 (287)
T PRK14176        184 LLNRNATVSVCHVFTDD---L--------------KK-YTLDADILVVATGV---KH----LIKADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHCCCEEEEEeccCCC---H--------------HH-HHhhCCEEEEccCC---cc----ccCHHHcCCCcEEEEeccc
Confidence            99999999999853221   1              11 23458999999985   22    3666789999999999876


Q ss_pred             C
Q 007151          480 P  480 (616)
Q Consensus       480 P  480 (616)
                      .
T Consensus       239 ~  239 (287)
T PRK14176        239 K  239 (287)
T ss_pred             c
Confidence            4

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.00  E-value=8.9e-05  Score=77.14  Aligned_cols=183  Identities=18%  Similarity=0.228  Sum_probs=114.3

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..--+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-.|+-..+  ...++.+++
T Consensus        37 ii~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p  115 (285)
T PRK14189         37 VILVGDNPASQVYV-RNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAP  115 (285)
T ss_pred             EEEeCCCchHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCc
Confidence            33455 44444433 233557899999988777663    3677777777 467899999999975221  111211111


Q ss_pred             hHhhhcceeEEEEeccCCeEE-EE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchh-HHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~-G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGa-grAia~~L~  401 (616)
                      . +-+-..+..    +-|++. |.    ---..|++.-|+..           +.+++||+|+|+|.|+. |+-++..|.
T Consensus       116 ~-KDVDGl~~~----n~g~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvViGrs~iVGkPla~lL~  179 (285)
T PRK14189        116 E-KDVDGFHVA----NAGALMTGQPLFRPCTPYGVMKMLESI-----------GIPLRGAHAVVIGRSNIVGKPMAMLLL  179 (285)
T ss_pred             c-cCcccCChh----hhhHhhCCCCCCcCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHH
Confidence            1 000000000    001111 11    11256777766542           36889999999999986 999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      +.|++|+++.+...                 ++.+ ...++|+||.++|.   |+    .+..++++++.+|+|+-.++
T Consensus       180 ~~~atVt~~hs~t~-----------------~l~~-~~~~ADIVV~avG~---~~----~i~~~~ik~gavVIDVGin~  233 (285)
T PRK14189        180 QAGATVTICHSKTR-----------------DLAA-HTRQADIVVAAVGK---RN----VLTADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HCCCEEEEecCCCC-----------------CHHH-HhhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEccccc
Confidence            99999999865321                 1111 23458999999983   32    36678899999999998875

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.99  E-value=0.00018  Score=74.87  Aligned_cols=195  Identities=23%  Similarity=0.294  Sum_probs=120.1

Q ss_pred             HHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhHhhhcceeEEEEeccCCeE
Q 007151          273 NEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL  347 (616)
Q Consensus       273 n~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAVNTIv~~~~dg~l  347 (616)
                      .+..+++|++.....++-    +++.+.++.+ .+.++.|+-|-.|+-..+    |+    -+.+.+++--. + -|| +
T Consensus        54 ~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i----~~----~~i~~~I~p~K-D-VDG-l  122 (284)
T PRK14179         54 ERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHI----NE----EKILLAIDPKK-D-VDG-F  122 (284)
T ss_pred             HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCC----CH----HHHHhccCccc-c-ccc-c
Confidence            467899999998777763    3566777777 467899999999975322    11    11111221111 1 022 2


Q ss_pred             EEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          348 FGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       348 ~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .-+|             --..|++.-|+..           +.+++||+++|+|. |-+|+.++..|.+.|+.|+++...
T Consensus       123 ~~~N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~  191 (284)
T PRK14179        123 HPMNTGHLWSGRPVMIPCTPAGIMEMFREY-----------NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR  191 (284)
T ss_pred             CHhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC
Confidence            2222             1245666666542           36789999999998 679999999999999999998432


Q ss_pred             HHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc-------cHHH
Q 007151          414 YDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-------TRLL  486 (616)
Q Consensus       414 ~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-------T~ll  486 (616)
                      .+   .++              + ...++|+||.++|..   .    .+...+++++.+|+|+-.++..       -.| 
T Consensus       192 t~---~l~--------------~-~~~~ADIVI~avg~~---~----~v~~~~ik~GavVIDvgin~~~~gkl~GDVdf-  245 (284)
T PRK14179        192 TR---NLA--------------E-VARKADILVVAIGRG---H----FVTKEFVKEGAVVIDVGMNRDENGKLIGDVDF-  245 (284)
T ss_pred             CC---CHH--------------H-HHhhCCEEEEecCcc---c----cCCHHHccCCcEEEEecceecCCCCeecCccH-
Confidence            11   111              1 124589999888742   1    2556678999999999887621       122 


Q ss_pred             HHHHHc-CC-eEE-cc-----HHHHHHHHHHHHHHHc
Q 007151          487 REAEES-GA-TIV-SG-----LEMFIGQAYEQYERFT  515 (616)
Q Consensus       487 ~~A~~~-G~-~~i-~G-----l~MLv~Qa~~qf~lwt  515 (616)
                      +.+++. ++ .-+ +|     ..||+...+.+.+.|.
T Consensus       246 ~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~  282 (284)
T PRK14179        246 DEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSL  282 (284)
T ss_pred             HHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            223332 22 112 23     4567777777666664

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.95  E-value=1.2e-05  Score=83.42  Aligned_cols=98  Identities=29%  Similarity=0.422  Sum_probs=68.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c-c----cchhcccc---c------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-A----LSLADLEN---F------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~-~----~~~~~l~~---~------  437 (616)
                      ..+.||.|+|+|| .|+|+++|+.|+++|++++++.|..++.+.+++++..    . .    +|+.+.++   +      
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            4678999999999 5999999999999999988888888877777665531    2 1    23332211   1      


Q ss_pred             CCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          438 NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       438 ~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      ..++.|++||+++.+. ..    +..........-++|++|-
T Consensus        88 ~fg~vDvLVNNAG~~~-~~----~~~~~~~~~~~~~mdtN~~  124 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL-VG----FLEDTDIEDVRNVMDTNVF  124 (282)
T ss_pred             hcCCCCEEEecCcccc-cc----ccccCcHHHHHHHhhhhch
Confidence            4678999999999875 21    1112222333457888885

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.94  E-value=2.5e-05  Score=83.17  Aligned_cols=89  Identities=19%  Similarity=0.307  Sum_probs=66.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHH-HCCC-eEEEEECCHHHHHHHHHHHCC----cccchhcccccCCCCccEEEEcCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAK-AKGA-RVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~-~~G~-~V~v~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ..++++|+|+|++|++.+.++. ..++ +|.|+||+.++++++++++..    ....+++.++ ...++|+||+|||.+ 
T Consensus       126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~aDiVi~aT~s~-  203 (325)
T PRK08618        126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADE-AIEEADIIVTVTNAK-  203 (325)
T ss_pred             CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEccCCC-
Confidence            4678999999999999998876 4577 899999999999999987642    2223344433 345689999999965 


Q ss_pred             CCCCCCCccccccccCccEEEEE
Q 007151          454 QPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .|     .+. ++++++..|.-+
T Consensus       204 ~p-----~i~-~~l~~G~hV~~i  220 (325)
T PRK08618        204 TP-----VFS-EKLKKGVHINAV  220 (325)
T ss_pred             Cc-----chH-HhcCCCcEEEec
Confidence            33     255 778887776544

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=97.92  E-value=7e-05  Score=63.95  Aligned_cols=80  Identities=30%  Similarity=0.467  Sum_probs=60.4

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccch
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL  431 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~  431 (616)
                      .+.|.+..|+.....       .+.++.+++++|+|+|++|+.++..|.+.|. +|++++|                   
T Consensus         2 t~~~~~~~l~~~~~~-------~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------   55 (86)
T cd05191           2 TAAGAVALLKAAGKV-------TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------   55 (86)
T ss_pred             hhHHHHHHHHHHHHH-------hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------
Confidence            356777777765432       1246789999999999999999999999965 8999988                   


Q ss_pred             hcccccCCCCccEEEEcCCCCCCCCCCCCcccc---ccccCccEEEEE
Q 007151          432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDA  476 (616)
Q Consensus       432 ~~l~~~~~~~~divInat~~gm~p~~~~~pi~~---~~l~~~~~v~Di  476 (616)
                                 |++|++++.+-.       +.+   ..+.+..+++|+
T Consensus        56 -----------di~i~~~~~~~~-------~~~~~~~~~~~~~~v~~~   85 (86)
T cd05191          56 -----------DILVTATPAGVP-------VLEEATAKINEGAVVIDL   85 (86)
T ss_pred             -----------CEEEEcCCCCCC-------chHHHHHhcCCCCEEEec
Confidence                       899999986522       222   345667888886

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.89  E-value=0.00032  Score=73.02  Aligned_cols=181  Identities=19%  Similarity=0.258  Sum_probs=112.6

Q ss_pred             Eec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccHhH
Q 007151          258 IIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVA  329 (616)
Q Consensus       258 liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~~A  329 (616)
                      ++| +|-+++.- ..-.+..+++|++.....++-    +++...++.+ .++.+.|+-|-.|+...+  -..++.++|. 
T Consensus        38 ~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~-  115 (285)
T PRK14191         38 LVGKDPASQTYV-NMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPN-  115 (285)
T ss_pred             EeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-
Confidence            456 44444443 233557899999987776664    3577777777 467899999999975211  1112222211 


Q ss_pred             hhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC
Q 007151          330 KSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK  403 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~~~  403 (616)
                      +-+-..+..    +-|++ .|.    ---..|++.-|+..           +.+++||+|+|+|.| -.|+-++..|.+.
T Consensus       116 KDVDGl~~~----n~g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~  180 (285)
T PRK14191        116 KDVDGFHPL----NIGKLCSQLDGFVPATPMGVMRLLKHY-----------HIEIKGKDVVIIGASNIVGKPLAMLMLNA  180 (285)
T ss_pred             ccccccChh----hHHHHhcCCCCCCCCcHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHHC
Confidence            000000000    00111 111    12345666666542           367899999999998 7999999999999


Q ss_pred             CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          404 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       404 G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      |+.|+++......   +.+               ...++|+||.|++.   |.    .+..++++++.+|+|+-.++
T Consensus       181 gAtVtv~hs~t~~---l~~---------------~~~~ADIvV~AvG~---p~----~i~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        181 GASVSVCHILTKD---LSF---------------YTQNADIVCVGVGK---PD----LIKASMVKKGAVVVDIGINR  232 (285)
T ss_pred             CCEEEEEeCCcHH---HHH---------------HHHhCCEEEEecCC---CC----cCCHHHcCCCcEEEEeeccc
Confidence            9999998643221   211               12458999999873   22    36667889999999998765

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.88  E-value=3.5e-05  Score=81.62  Aligned_cols=80  Identities=31%  Similarity=0.412  Sum_probs=63.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---------ccchhcccc---c------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---------ALSLADLEN---F------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~---------~~~~~~l~~---~------  437 (616)
                      .++.++.++|+|+ .|+|+++|+.|+.+|++|++.+|+.+++++.++++...         .+|+.++.+   +      
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            4678899999998 79999999999999999999999999999999888631         134333211   1      


Q ss_pred             CCCCccEEEEcCCCCCCCC
Q 007151          438 NPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       438 ~~~~~divInat~~gm~p~  456 (616)
                      .....|++||++++...|.
T Consensus       111 ~~~~ldvLInNAGV~~~~~  129 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF  129 (314)
T ss_pred             cCCCccEEEeCcccccCCc
Confidence            2456899999999876543

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.86  E-value=0.001  Score=69.20  Aligned_cols=216  Identities=19%  Similarity=0.268  Sum_probs=127.3

Q ss_pred             Eec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccHhH
Q 007151          258 IIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVA  329 (616)
Q Consensus       258 liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~~A  329 (616)
                      ++| +|-+++.-- .-.+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+...+  -..++.+++. 
T Consensus        39 ~vg~d~as~~Yv~-~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~-  116 (284)
T PRK14190         39 LVGDDPASHSYVR-GKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPE-  116 (284)
T ss_pred             EeCCCHHHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcc-
Confidence            445 444444332 33567899999988777764    2677777777 467899999999975321  1122222211 


Q ss_pred             hhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC
Q 007151          330 KSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK  403 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~~~  403 (616)
                      +-+-..+..-    -|++ .|.    ---..|++.-|+..           +.+++||+|+|+|.+ -.|+-++..|.+.
T Consensus       117 KDVDGl~~~n----~g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~Pla~lL~~~  181 (284)
T PRK14190        117 KDVDGFHPIN----VGRMMLGQDTFLPCTPHGILELLKEY-----------NIDISGKHVVVVGRSNIVGKPVGQLLLNE  181 (284)
T ss_pred             ccccccCHhh----HHHHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence            0000000000    0111 110    11245666666542           368999999999987 5899999999999


Q ss_pred             CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc-
Q 007151          404 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-  482 (616)
Q Consensus       404 G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-  482 (616)
                      |+.|+++.......++                  ...++|+||.+++.   |+    .+..++++++.+|+|+-.+... 
T Consensus       182 ~atVt~chs~t~~l~~------------------~~~~ADIvI~AvG~---p~----~i~~~~ik~gavVIDvGi~~~~~  236 (284)
T PRK14190        182 NATVTYCHSKTKNLAE------------------LTKQADILIVAVGK---PK----LITADMVKEGAVVIDVGVNRLEN  236 (284)
T ss_pred             CCEEEEEeCCchhHHH------------------HHHhCCEEEEecCC---CC----cCCHHHcCCCCEEEEeeccccCC
Confidence            9999998653221111                  12457999999873   22    3667889999999999876521 


Q ss_pred             ------cHHHHHHHHcCCeE--E-cc-----HHHHHHHHHHHHHHHcC
Q 007151          483 ------TRLLREAEESGATI--V-SG-----LEMFIGQAYEQYERFTG  516 (616)
Q Consensus       483 ------T~ll~~A~~~G~~~--i-~G-----l~MLv~Qa~~qf~lwtG  516 (616)
                            -.| +.+++.-..+  + +|     ..||+++-+.+++.|.+
T Consensus       237 gkl~GDvd~-e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~  283 (284)
T PRK14190        237 GKLCGDVDF-DNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG  283 (284)
T ss_pred             CCeeccCcH-HHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence                  222 2333321111  1 23     45667766666666554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.85  E-value=2.4e-05  Score=80.93  Aligned_cols=77  Identities=22%  Similarity=0.396  Sum_probs=59.5

Q ss_pred             cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c----ccchhccccc---------CCC
Q 007151          377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H----ALSLADLENF---------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~----~~~~~~l~~~---------~~~  440 (616)
                      .+.+|+.|||+|+| |.||++|..++++|+++.+++.+.+-.++..+++..  +    .+++.+.++.         ..+
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            56889999999997 999999999999999999999998877777766652  1    1343322111         456


Q ss_pred             CccEEEEcCCCCC
Q 007151          441 DGMILANTTSIGM  453 (616)
Q Consensus       441 ~~divInat~~gm  453 (616)
                      ..|++||++++-+
T Consensus       114 ~V~ILVNNAGI~~  126 (300)
T KOG1201|consen  114 DVDILVNNAGIVT  126 (300)
T ss_pred             CceEEEecccccc
Confidence            7999999999743

>PRK07340 ornithine cyclodeaminase; Validated

Probab=97.83  E-value=5.6e-05  Score=79.80  Aligned_cols=90  Identities=21%  Similarity=0.147  Sum_probs=65.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCcccc--hhcccccCCCCccEEEEcCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~~~~~--~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ...++++|+|+|++|+..+.++.. .+. +|+|+||+.++++++++++......  .++.++ ...++|+||+|||.. .
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~-av~~aDiVitaT~s~-~  200 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEA-IPEAVDLVVTATTSR-T  200 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHH-HhhcCCEEEEccCCC-C
Confidence            356899999999999999999975 577 8999999999999999988532111  223333 345799999999964 2


Q ss_pred             CCCCCCccccccccCccEEEEE
Q 007151          455 PKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      |.     + ..+++++..+.=+
T Consensus       201 Pl-----~-~~~~~~g~hi~~i  216 (304)
T PRK07340        201 PV-----Y-PEAARAGRLVVAV  216 (304)
T ss_pred             ce-----e-CccCCCCCEEEec
Confidence            32     3 2356666554444

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.80  E-value=0.00024  Score=73.84  Aligned_cols=176  Identities=18%  Similarity=0.234  Sum_probs=113.2

Q ss_pred             Eec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhHhh
Q 007151          258 IIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  331 (616)
Q Consensus       258 liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~  331 (616)
                      ++| +|-+++.--.. -+.++++|++.....++-    +++.+.++.+ .+.+..|+-|-+|+...+    |+    -+.
T Consensus        38 ~vg~d~as~~Yv~~k-~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i----~~----~~i  108 (282)
T PRK14180         38 IVGNDPASKTYVASK-EKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHI----NK----NNV  108 (282)
T ss_pred             EeCCCHHHHHHHHHH-HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH----HHH
Confidence            444 45554433222 456899999988776654    3577777777 477899999999985322    11    012


Q ss_pred             hcceeEEEEeccCC-------eE-EEE-----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHH
Q 007151          332 IGAVNCIIRRQSDG-------KL-FGY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALA  397 (616)
Q Consensus       332 iGAVNTIv~~~~dg-------~l-~G~-----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia  397 (616)
                      +.+++-.. + -||       ++ .|.     ---..|++.-|+..           +.+++||+|+|+|.+ -.|+-++
T Consensus       109 ~~~I~p~K-D-VDGl~~~n~g~l~~g~~~~~~PcTp~aii~lL~~y-----------~i~l~Gk~vvViGrS~~VGkPla  175 (282)
T PRK14180        109 IYSIKPEK-D-VDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREY-----------GIKTEGAYAVVVGASNVVGKPVS  175 (282)
T ss_pred             HhhcCccc-c-ccccChhhHHHHhcCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHH
Confidence            22222211 1 021       11 221     12356777766642           257899999999987 5899999


Q ss_pred             HHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEe
Q 007151          398 YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       398 ~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      ..|.+.|+.|+++.+....   +.              + ...++|+||.|+|.   |.    .+..++++++.+|+|+-
T Consensus       176 ~lL~~~~ATVt~chs~T~d---l~--------------~-~~k~ADIvIsAvGk---p~----~i~~~~vk~gavVIDvG  230 (282)
T PRK14180        176 QLLLNAKATVTTCHRFTTD---LK--------------S-HTTKADILIVAVGK---PN----FITADMVKEGAVVIDVG  230 (282)
T ss_pred             HHHHHCCCEEEEEcCCCCC---HH--------------H-HhhhcCEEEEccCC---cC----cCCHHHcCCCcEEEEec
Confidence            9999999999999763221   11              1 23458999998884   22    36677899999999997


Q ss_pred             eCC
Q 007151          478 YTP  480 (616)
Q Consensus       478 Y~P  480 (616)
                      .+.
T Consensus       231 in~  233 (282)
T PRK14180        231 INH  233 (282)
T ss_pred             ccc
Confidence            764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.80  E-value=1e-05  Score=87.99  Aligned_cols=123  Identities=24%  Similarity=0.375  Sum_probs=82.6

Q ss_pred             EEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC-c----ccchh---cccccCCCCccEEEEcCCCCC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-H----ALSLA---DLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~-~----~~~~~---~l~~~~~~~~divInat~~gm  453 (616)
                      |+|+|+|.+|++++..|.+.+-  +|++++|+.++++++++.+.. .    .+++.   ++.+ ...+.|+||||+|.-.
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGGG
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccch
Confidence            6899999999999999999874  899999999999999987432 1    12332   2333 3456799999998531


Q ss_pred             CCCCCCCccccccccCccEEEEEee-CCcccHHHHHHHHcCCeEEccH-------HHHHHHHHHHHH
Q 007151          454 QPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSGL-------EMFIGQAYEQYE  512 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G~~~i~Gl-------~MLv~Qa~~qf~  512 (616)
                           ..++-..+++.+.-.+|..| .+....+-++|+++|..++.|.       .+++.+++.+|.
T Consensus        80 -----~~~v~~~~i~~g~~yvD~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~  141 (386)
T PF03435_consen   80 -----GEPVARACIEAGVHYVDTSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD  141 (386)
T ss_dssp             -----HHHHHHHHHHHT-EEEESS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred             -----hHHHHHHHHHhCCCeeccchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence                 12344556777778899777 4555667788899999888654       356666777666

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=97.78  E-value=6.2e-05  Score=80.08  Aligned_cols=94  Identities=15%  Similarity=0.126  Sum_probs=60.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++.+|+++|+|+|.||+.++.+|.+.|+ +|+|+||+.+. .    .++...  .+.+ + ....+|+||.||+....|+
T Consensus       171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~-~----~~~~~~--~~~~-~-~~~~~DvVIs~t~~Tas~~  241 (338)
T PRK00676        171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLT-L----PYRTVV--REEL-S-FQDPYDVIFFGSSESAYAF  241 (338)
T ss_pred             CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccc-c----chhhhh--hhhh-h-cccCCCEEEEcCCcCCCCC
Confidence            5789999999999999999999999998 89999999753 1    111100  0001 1 2346899999854222222


Q ss_pred             CCCCcccccccc--CccEEEEEeeCCcccH
Q 007151          457 VDETPIPKHALG--HYALVFDAVYTPKITR  484 (616)
Q Consensus       457 ~~~~pi~~~~l~--~~~~v~Di~Y~P~~T~  484 (616)
                      ..   +..+.+.  ...+++|+. .|++-.
T Consensus       242 p~---i~~~~~~~~~~r~~iDLA-vPRdId  267 (338)
T PRK00676        242 PH---LSWESLADIPDRIVFDFN-VPRTFP  267 (338)
T ss_pred             ce---eeHHHHhhccCcEEEEec-CCCCCc
Confidence            11   1111121  125899998 677653

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.76  E-value=7.7e-05  Score=78.81  Aligned_cols=77  Identities=27%  Similarity=0.365  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhcccc---c------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADLEN---F------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~l~~---~------  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..     ..    +|+.+..+   +      
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999998 6999999999999999999999999988887765521     11    23322211   1      


Q ss_pred             CCCCccEEEEcCCCCC
Q 007151          438 NPEDGMILANTTSIGM  453 (616)
Q Consensus       438 ~~~~~divInat~~gm  453 (616)
                      .....|++||+++...
T Consensus        90 ~~~~iD~li~nAG~~~  105 (313)
T PRK05854         90 EGRPIHLLINNAGVMT  105 (313)
T ss_pred             hCCCccEEEECCcccc
Confidence            2346899999998753

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.76  E-value=5e-05  Score=91.23  Aligned_cols=117  Identities=19%  Similarity=0.244  Sum_probs=86.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCC-Ce-------------EEEEECCHHHHHHHHHHH-CCcc--cchhccccc--CCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKG-AR-------------VVIANRTYDRARELAETV-GGHA--LSLADLENF--NPE  440 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G-~~-------------V~v~nRt~~ka~~la~~~-~~~~--~~~~~l~~~--~~~  440 (616)
                      +.|+|+|+|||.+|+.++..|++.. ++             |+|++++.++++++++.+ +...  +++.+.+++  ...
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            4679999999999999999998753 24             999999999999999887 3222  233333222  235


Q ss_pred             CccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          441 DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       441 ~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                      +.|+||+++|..++.     ++...+++.+.-++|..|...+ ..+.++|+++|..++++..
T Consensus       648 ~~DaVIsalP~~~H~-----~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~G  704 (1042)
T PLN02819        648 QVDVVISLLPASCHA-----VVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMG  704 (1042)
T ss_pred             CCCEEEECCCchhhH-----HHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCc
Confidence            699999999986543     3445667777778899887554 4567788899988876543

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.76  E-value=0.00048  Score=71.50  Aligned_cols=177  Identities=20%  Similarity=0.238  Sum_probs=115.4

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.-- .-.+..+++|++.....++-    +++.+.++.+ .++++.|+-|-.|+-..+    |+   . 
T Consensus        31 ii~vg~d~as~~Yv~-~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i----~~---~-  101 (279)
T PRK14178         31 TVIVGDDPASQMYVR-MKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGV----DT---E-  101 (279)
T ss_pred             EEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCC----CH---H-
Confidence            34556 455544443 33456789999988777754    3677777777 577899999999975321    11   0 


Q ss_pred             hhhcceeEEEEeccCCeEEEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrA  395 (616)
                      +.+.+++--. + -|| ++-+|             --..|++.-|+..           +.+++||+|+|+|.+ -.||.
T Consensus       102 ~v~~~I~p~K-D-VDG-l~~~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~V~ViGrs~~vGrp  167 (279)
T PRK14178        102 RVIAAILPEK-D-VDG-FHPLNLGRLVSGLPGFAPCTPNGIMTLLHEY-----------KISIAGKRAVVVGRSIDVGRP  167 (279)
T ss_pred             HHHhccCccc-C-ccc-CChhhHHHHhCCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCccccHH
Confidence            1111111111 0 022 21111             2346777766542           367899999999998 78999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|...|+.|+++.++....++                  ...++|+||+|+|..   .    .+..++++++.+++|
T Consensus       168 la~lL~~~~atVtv~hs~t~~L~~------------------~~~~ADIvI~Avgk~---~----lv~~~~vk~GavVID  222 (279)
T PRK14178        168 MAALLLNADATVTICHSKTENLKA------------------ELRQADILVSAAGKA---G----FITPDMVKPGATVID  222 (279)
T ss_pred             HHHHHHhCCCeeEEEecChhHHHH------------------HHhhCCEEEECCCcc---c----ccCHHHcCCCcEEEE
Confidence            999999999999999886432221                  124589999999732   1    366778899999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +..+.
T Consensus       223 Vgi~~  227 (279)
T PRK14178        223 VGINQ  227 (279)
T ss_pred             eeccc
Confidence            99874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.73  E-value=0.00038  Score=72.98  Aligned_cols=177  Identities=21%  Similarity=0.210  Sum_probs=110.6

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|.+++.-- .--+..+++|++..-..++-    +++...++.+ .+.++.|+-|-.|+-..    +|   +. 
T Consensus        37 ~i~vg~~~~s~~Yv~-~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~----~~---~~-  107 (296)
T PRK14188         37 VVLVGEDPASQVYVR-SKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKH----LD---SE-  107 (296)
T ss_pred             EEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC----CC---HH-
Confidence            33455 444444332 23456789999976554443    3677777777 47789999999997522    21   11 


Q ss_pred             hhhcceeEEEEeccCC-------eE-EE----EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEc-cchhHHHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KL-FG----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG-AGGAGKAL  396 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l-~G----~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlG-AGGagrAi  396 (616)
                      +.+.+++--. + -||       ++ .|    .---..|++.-|+..           +.+++||+|+|+| .|-+|+.+
T Consensus       108 ~i~~~I~p~K-D-VDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~-----------~i~~~Gk~V~viGrs~~mG~Pm  174 (296)
T PRK14188        108 AVIQAIDPEK-D-VDGLHVVNAGRLATGETALVPCTPLGCMMLLRRV-----------HGDLSGLNAVVIGRSNLVGKPM  174 (296)
T ss_pred             HHHhccCccc-c-cccCChhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEEcCCcchHHHH
Confidence            1111111110 0 011       11 01    011256777766542           2578999999999 67899999


Q ss_pred             HHHHHHCCCeEEEE-ECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          397 AYGAKAKGARVVIA-NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       397 a~~L~~~G~~V~v~-nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      +..|.+.|+.|+++ +||.+ .++                  ...++|+||.+++..   .    .+...++.++.+++|
T Consensus       175 A~~L~~~g~tVtv~~~rT~~-l~e------------------~~~~ADIVIsavg~~---~----~v~~~~lk~GavVID  228 (296)
T PRK14188        175 AQLLLAANATVTIAHSRTRD-LPA------------------VCRRADILVAAVGRP---E----MVKGDWIKPGATVID  228 (296)
T ss_pred             HHHHHhCCCEEEEECCCCCC-HHH------------------HHhcCCEEEEecCCh---h----hcchheecCCCEEEE
Confidence            99999999999999 48742 111                  123479999988842   1    255566888999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.+.
T Consensus       229 vGin~  233 (296)
T PRK14188        229 VGINR  233 (296)
T ss_pred             cCCcc
Confidence            98765

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.73  E-value=0.00067  Score=70.53  Aligned_cols=183  Identities=20%  Similarity=0.277  Sum_probs=113.1

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++...++.+ .+.++.|+-|-+|+...+  -..++.+++
T Consensus        38 ii~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p  116 (284)
T PRK14177         38 TILVGNNPASETYV-SMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIAL  116 (284)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCc
Confidence            44556 34433322 233567899999988776654    3566777777 467899999999975321  112221111


Q ss_pred             hHhhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~  401 (616)
                      . +-+-..+..    +-|++ .|.    -.-..|++.-|+..           +.+++||+|+|+|-+ -.|+-++..|.
T Consensus       117 ~-KDVDGl~~~----n~g~l~~g~~~~~PcTp~avi~ll~~y-----------~i~l~Gk~vvViGrS~iVGkPla~lL~  180 (284)
T PRK14177        117 E-KDVDGVTTL----SFGKLSMGVETYLPCTPYGMVLLLKEY-----------GIDVTGKNAVVVGRSPILGKPMAMLLT  180 (284)
T ss_pred             c-cccccCChh----hHHHHHcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHHH
Confidence            1 000000000    00111 111    12356777766642           368999999999987 58999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      +.|+.|+++......   +.              + ...++|+||.|+|.   |+    .+..++++++.+|+|+-.+.
T Consensus       181 ~~~atVt~chs~T~~---l~--------------~-~~~~ADIvIsAvGk---~~----~i~~~~ik~gavVIDvGin~  234 (284)
T PRK14177        181 EMNATVTLCHSKTQN---LP--------------S-IVRQADIIVGAVGK---PE----FIKADWISEGAVLLDAGYNP  234 (284)
T ss_pred             HCCCEEEEeCCCCCC---HH--------------H-HHhhCCEEEEeCCC---cC----ccCHHHcCCCCEEEEecCcc
Confidence            999999998753221   11              1 12458999988874   22    36677899999999998765

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.72  E-value=0.00085  Score=69.64  Aligned_cols=177  Identities=20%  Similarity=0.153  Sum_probs=112.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.-- .-.+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+..    ++|+    -
T Consensus        37 ii~vg~d~as~~Yv~-~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~----~~~~----~  107 (278)
T PRK14172         37 SILVGNDGGSIYYMN-NQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPK----HLDE----K  107 (278)
T ss_pred             EEEeCCCHHHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCC----CCCH----H
Confidence            33556 444433332 23467899999998877764    3566777777 4678999999999752    2221    1


Q ss_pred             hhhcceeEEEEeccCCeEEEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrA  395 (616)
                      +.+.+++--. + -|| ++=+|             --..|+++-|+..           +.+++||+|+|+|-+ -.|+-
T Consensus       108 ~i~~~I~p~K-D-VDG-l~~~n~g~l~~g~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~~VGkP  173 (278)
T PRK14172        108 KITNKIDANK-D-IDC-LTFISVGKFYKGEKCFLPCTPNSVITLIKSL-----------NIDIEGKEVVVIGRSNIVGKP  173 (278)
T ss_pred             HHHhccCccc-c-cCc-cCHhhHHHHhCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHH
Confidence            1222222211 1 021 11111             2345666666542           257899999999987 58999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|.+.|+.|+++.+.....              .   + ...++|+||.|+|.   |+    .+..++++++.+|+|
T Consensus       174 la~lL~~~~AtVt~chs~T~~l--------------~---~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gavVID  228 (278)
T PRK14172        174 VAQLLLNENATVTICHSKTKNL--------------K---E-VCKKADILVVAIGR---PK----FIDEEYVKEGAIVID  228 (278)
T ss_pred             HHHHHHHCCCEEEEeCCCCCCH--------------H---H-HHhhCCEEEEcCCC---cC----ccCHHHcCCCcEEEE
Confidence            9999999999999997532211              1   1 12458999998884   22    366778999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.++
T Consensus       229 vGin~  233 (278)
T PRK14172        229 VGTSS  233 (278)
T ss_pred             eeccc
Confidence            96654

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00011  Score=76.76  Aligned_cols=76  Identities=29%  Similarity=0.428  Sum_probs=59.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--c----cchhcc---ccc------CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLADL---ENF------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~--~----~~~~~l---~~~------~~~  440 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++..  .    .|+.+.   .++      ...
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3578999999998 79999999999999999999999999999998887521  1    233221   110      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        85 ~id~vI~nAG~~   96 (296)
T PRK05872         85 GIDVVVANAGIA   96 (296)
T ss_pred             CCCEEEECCCcC
Confidence            689999999864

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.69  E-value=0.00017  Score=68.80  Aligned_cols=97  Identities=28%  Similarity=0.268  Sum_probs=61.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||+++|+|.|.+|+.+|+.|..+|++|+|+.+++-++-+.+.+ +.+..++++    ....+|++|.+|+-..   
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d-Gf~v~~~~~----a~~~adi~vtaTG~~~---   90 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMD-GFEVMTLEE----ALRDADIFVTATGNKD---   90 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT-T-EEE-HHH----HTTT-SEEEE-SSSSS---
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc-CcEecCHHH----HHhhCCEEEECCCCcc---
Confidence            56889999999999999999999999999999999999776554322 223334443    2456899999998421   


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCcccHH
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPKITRL  485 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~~T~l  485 (616)
                          -+..   ..++++.++.++-..+.+-.+
T Consensus        91 ----vi~~e~~~~mkdgail~n~Gh~d~Eid~  118 (162)
T PF00670_consen   91 ----VITGEHFRQMKDGAILANAGHFDVEIDV  118 (162)
T ss_dssp             ----SB-HHHHHHS-TTEEEEESSSSTTSBTH
T ss_pred             ----ccCHHHHHHhcCCeEEeccCcCceeEee
Confidence                1222   235777888888777666544

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.67  E-value=0.001  Score=69.15  Aligned_cols=182  Identities=20%  Similarity=0.266  Sum_probs=113.9

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++...++.+ .+.++.|+-|-.|+...+  -..++.+++
T Consensus        35 ii~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p  113 (282)
T PRK14169         35 VVLVGSDPASEVYV-RNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDP  113 (282)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCc
Confidence            44556 44444333 344567899999988777764    2566777766 467899999999976322  112222221


Q ss_pred             hHhhhcceeEEEEeccCCeEE-E----EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~-G----~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~  401 (616)
                      . +-+-..+..    +-|+++ |    .---..|++.-|+..           +.+++||+++|+|-+ -.|+-++..|.
T Consensus       114 ~-KDVDGl~~~----N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~  177 (282)
T PRK14169        114 D-KDVDGFSPV----SVGRLWANEPTVVASTPYGIMALLDAY-----------DIDVAGKRVVIVGRSNIVGRPLAGLMV  177 (282)
T ss_pred             c-cCcccCChh----hhHHHhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHH
Confidence            1 000001000    001111 1    112346677766542           367899999999987 58999999999


Q ss_pred             HCCCeEEEEE-CCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIAN-RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~n-Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      +.|+.|+++. ||..    +.              + ...++|+||.|+|.   |+    .+..++++++.+|+|+-.++
T Consensus       178 ~~~atVtichs~T~~----l~--------------~-~~~~ADIvI~AvG~---p~----~i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        178 NHDATVTIAHSKTRN----LK--------------Q-LTKEADILVVAVGV---PH----FIGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HCCCEEEEECCCCCC----HH--------------H-HHhhCCEEEEccCC---cC----ccCHHHcCCCcEEEEeeccc
Confidence            9999999985 4421    11              1 12457999999884   22    26677899999999998876

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.67  E-value=0.00056  Score=71.22  Aligned_cols=177  Identities=19%  Similarity=0.273  Sum_probs=112.4

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..--+.++++|++.....++-    +++.+.++.+ .++++.|+-|-+|+...    +|+    -
T Consensus        37 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~----id~----~  107 (288)
T PRK14171         37 IVLVGDNPASIIYV-KNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSS----IDK----N  107 (288)
T ss_pred             EEEeCCCccHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH----H
Confidence            44556 33333222 233557899999988777754    3566666666 46789999999997532    211    1


Q ss_pred             hhhcceeEEEEeccCCeEEEEe--------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN--------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N--------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                      +.+.+++--. + -|| ++-+|              --..|++.-|+..           +.+++||+|+|+|-+ -.|+
T Consensus       108 ~i~~~I~p~K-D-VDG-l~~~N~g~l~~g~~~~~~PcTp~av~~lL~~y-----------~i~l~GK~vvViGrS~iVGk  173 (288)
T PRK14171        108 KILSAVSPSK-D-IDG-FHPLNVGYLHSGISQGFIPCTALGCLAVIKKY-----------EPNLTGKNVVIIGRSNIVGK  173 (288)
T ss_pred             HHHhccCccc-c-ccc-CCccchhhhhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchH
Confidence            1222222211 0 022 22222              1245666666542           257899999999987 5899


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      -++..|.+.|+.|+++......   +.              + ...++|+||.|+|.   |+    .+..++++++.+|+
T Consensus       174 Pla~lL~~~~ATVtichs~T~~---L~--------------~-~~~~ADIvV~AvGk---p~----~i~~~~vk~GavVI  228 (288)
T PRK14171        174 PLSALLLKENCSVTICHSKTHN---LS--------------S-ITSKADIVVAAIGS---PL----KLTAEYFNPESIVI  228 (288)
T ss_pred             HHHHHHHHCCCEEEEeCCCCCC---HH--------------H-HHhhCCEEEEccCC---CC----ccCHHHcCCCCEEE
Confidence            9999999999999998743211   11              1 12458999998883   32    36677899999999


Q ss_pred             EEeeCC
Q 007151          475 DAVYTP  480 (616)
Q Consensus       475 Di~Y~P  480 (616)
                      |+-.+.
T Consensus       229 DvGin~  234 (288)
T PRK14171        229 DVGINR  234 (288)
T ss_pred             Eeeccc
Confidence            998775

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.66  E-value=0.00071  Score=70.26  Aligned_cols=181  Identities=19%  Similarity=0.264  Sum_probs=112.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+..+++|++..-..++-    +++...++.+ .+++..|+-|-.|+...+  -..++.+++
T Consensus        36 ii~vgdd~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p  114 (281)
T PRK14183         36 VILVGDDPASHTYV-KMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDP  114 (281)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCc
Confidence            34556 44444333 233557889999986555543    3577777777 477899999999985221  112222221


Q ss_pred             h--HhhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHH
Q 007151          328 V--AKSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYG  399 (616)
Q Consensus       328 ~--A~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~  399 (616)
                      .  +.-+...|.       |++ .|.    ---..|++.-|+..           +.+++||+|+|+|.| -.|+-++..
T Consensus       115 ~KDVDGl~~~n~-------g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~~VG~Pla~l  176 (281)
T PRK14183        115 KKDVDGFHPYNV-------GRLVTGLDGFVPCTPLGVMELLEEY-----------EIDVKGKDVCVVGASNIVGKPMAAL  176 (281)
T ss_pred             hhcccccChhhh-------hHHhcCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCCCcchHHHHHH
Confidence            1  001111111       111 111    11256777766542           368999999999998 689999999


Q ss_pred             HHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          400 AKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       400 L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      |.+.|+.|+++.....   .+.              + ...++|+||.|+|-   |.    .+..++++++.+|+|+-.+
T Consensus       177 L~~~~AtVti~hs~T~---~l~--------------~-~~~~ADIvV~AvGk---p~----~i~~~~vk~gavvIDvGin  231 (281)
T PRK14183        177 LLNANATVDICHIFTK---DLK--------------A-HTKKADIVIVGVGK---PN----LITEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             HHHCCCEEEEeCCCCc---CHH--------------H-HHhhCCEEEEecCc---cc----ccCHHHcCCCcEEEEeecc
Confidence            9999999999864321   111              1 12458999999873   22    3667789999999999876


Q ss_pred             C
Q 007151          480 P  480 (616)
Q Consensus       480 P  480 (616)
                      +
T Consensus       232 ~  232 (281)
T PRK14183        232 R  232 (281)
T ss_pred             c
Confidence            5

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.65  E-value=0.0025  Score=66.33  Aligned_cols=177  Identities=16%  Similarity=0.250  Sum_probs=112.1

Q ss_pred             EEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhHh
Q 007151          257 GIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  330 (616)
Q Consensus       257 ~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~  330 (616)
                      -++| +|-+++.- ..--+..+++|++.....++-    +++...++.+ .+.++.|+-|-+|+-.    ++|   +. +
T Consensus        38 I~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~----~id---~~-~  108 (284)
T PRK14193         38 VLVGDDPGSQAYV-RGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPK----HLD---EN-A  108 (284)
T ss_pred             EEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCC---HH-H
Confidence            3455 33333322 233557889999987776663    3566667666 4678999999999852    222   11 1


Q ss_pred             hhcceeEEEEeccCC-------eEE-E----EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHH
Q 007151          331 SIGAVNCIIRRQSDG-------KLF-G----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALA  397 (616)
Q Consensus       331 ~iGAVNTIv~~~~dg-------~l~-G----~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia  397 (616)
                      .+.+++--. + -||       +++ |    .---..|++.-|+..           +.+++||+++|+|.+ -.|+-++
T Consensus       109 i~~~I~p~K-D-VDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~-----------~i~l~Gk~vvViGrS~~VGkPla  175 (284)
T PRK14193        109 VLERIDPAK-D-ADGLHPTNLGRLVLNEPAPLPCTPRGIVHLLRRY-----------DVELAGAHVVVIGRGVTVGRPIG  175 (284)
T ss_pred             HHhcCCccc-C-ccCCChhhhhHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHH
Confidence            222222211 0 011       111 1    122356777766542           367899999999987 5899999


Q ss_pred             HHHHH--CCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          398 YGAKA--KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       398 ~~L~~--~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ..|.+  .|+.|+++......   +.              + ...++|+||.|+|.   |+    .+..++++++.+|+|
T Consensus       176 ~lL~~~~~~atVtvchs~T~~---l~--------------~-~~k~ADIvV~AvGk---p~----~i~~~~ik~GavVID  230 (284)
T PRK14193        176 LLLTRRSENATVTLCHTGTRD---LA--------------A-HTRRADIIVAAAGV---AH----LVTADMVKPGAAVLD  230 (284)
T ss_pred             HHHhhccCCCEEEEeCCCCCC---HH--------------H-HHHhCCEEEEecCC---cC----ccCHHHcCCCCEEEE
Confidence            99998  68899998764211   11              1 22458999999884   22    366788999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.++
T Consensus       231 vGin~  235 (284)
T PRK14193        231 VGVSR  235 (284)
T ss_pred             ccccc
Confidence            98776

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00016  Score=74.29  Aligned_cols=75  Identities=24%  Similarity=0.255  Sum_probs=56.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc-----CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF-----NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~---l~~~-----~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.    ...    .|+.+   +..+     ..+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            578999999998 699999999999999999999999998888877652    111    22222   1110     124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        85 ~iD~lv~nag~~   96 (263)
T PRK08339         85 EPDIFFFSTGGP   96 (263)
T ss_pred             CCcEEEECCCCC
Confidence            689999998753

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=97.64  E-value=0.0012  Score=70.28  Aligned_cols=179  Identities=20%  Similarity=0.227  Sum_probs=114.1

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..-.+..+++|++..-..++-    +++.+.++.+ .+.++.|+-|-.|+..    ++|+    -
T Consensus        91 iIlvGddpaS~~Yv-~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~----hid~----~  161 (345)
T PLN02897         91 VVLVGQQRDSQTYV-RNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQ----HLDE----S  161 (345)
T ss_pred             EEEeCCChHHHHHH-HHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH----H
Confidence            34566 45554333 233457789999987666654    2577777777 4778999999999752    2221    1


Q ss_pred             hhhcceeEEEEeccCC-------eE-EEE------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l-~G~------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                      +.+.+++--. + -||       ++ .|.      ----.|++.-|+..           +.+++||+|+|+|-+ -+|+
T Consensus       162 ~i~~~I~p~K-D-VDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~-----------~i~l~GK~vvVIGRS~iVGk  228 (345)
T PLN02897        162 KILNMVRLEK-D-VDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRS-----------GVEIAGKNAVVIGRSNIVGL  228 (345)
T ss_pred             HHHhccCccc-C-ccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccH
Confidence            1222222211 1 022       22 111      11246777766542           357899999999987 5899


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      -++..|.+.|+.|+++.......                 .+ ...++||||.|+|.   |+    .+..++++++.+|+
T Consensus       229 Pla~LL~~~~ATVTicHs~T~nl-----------------~~-~~~~ADIvIsAvGk---p~----~v~~d~vk~GavVI  283 (345)
T PLN02897        229 PMSLLLQRHDATVSTVHAFTKDP-----------------EQ-ITRKADIVIAAAGI---PN----LVRGSWLKPGAVVI  283 (345)
T ss_pred             HHHHHHHHCCCEEEEEcCCCCCH-----------------HH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEE
Confidence            99999999999999986532111                 11 12458999998884   22    36678899999999


Q ss_pred             EEeeCCc
Q 007151          475 DAVYTPK  481 (616)
Q Consensus       475 Di~Y~P~  481 (616)
                      |+-.++.
T Consensus       284 DVGin~~  290 (345)
T PLN02897        284 DVGTTPV  290 (345)
T ss_pred             Ecccccc
Confidence            9988763

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.64  E-value=0.00044  Score=71.84  Aligned_cols=178  Identities=20%  Similarity=0.232  Sum_probs=114.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+.-- .-.++.+++|++.....++-    +++.+.++.+ .++++.|+-|-.|....    +|+    -
T Consensus        35 iI~vg~d~as~~Yv~-~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~----i~~----~  105 (282)
T PRK14182         35 VVRVGDDPASAIYVR-GKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKH----VDE----R  105 (282)
T ss_pred             EEEeCCCHHHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC----CCH----H
Confidence            34555 444443332 23457899999988777753    3577777777 47789999999998532    211    1


Q ss_pred             hhhcceeEEEEeccCC-------eE-EE-----EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KL-FG-----YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l-~G-----~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrA  395 (616)
                      +.+.+++--.=-  ||       ++ .|     .---..|++.-|+..           +.+++||+|+|+|-+ -.|+-
T Consensus       106 ~i~~~I~p~KDV--DGl~~~n~g~l~~g~~~~~~PcTp~avi~ll~~~-----------~i~l~Gk~vvViGrS~iVGkP  172 (282)
T PRK14182        106 AVLDAISPAKDA--DGFHPFNVGALSIGIAGVPRPCTPAGVMRMLDEA-----------RVDPKGKRALVVGRSNIVGKP  172 (282)
T ss_pred             HHHhccCcccCc--CCCCHhHHHHHhCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHH
Confidence            122222222100  21       11 11     112256777776642           267899999999987 58999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|.+.|+.|+++......   +.              + ...++|+||.|+|.   |+    .+..++++++.+|+|
T Consensus       173 la~lL~~~~AtVtichs~T~n---l~--------------~-~~~~ADIvI~AvGk---~~----~i~~~~ik~gaiVID  227 (282)
T PRK14182        173 MAMMLLERHATVTIAHSRTAD---LA--------------G-EVGRADILVAAIGK---AE----LVKGAWVKEGAVVID  227 (282)
T ss_pred             HHHHHHHCCCEEEEeCCCCCC---HH--------------H-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEE
Confidence            999999999999998753211   11              1 12458999998874   32    366788999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.+.
T Consensus       228 vGin~  232 (282)
T PRK14182        228 VGMNR  232 (282)
T ss_pred             eecee
Confidence            98765

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.63  E-value=0.00079  Score=70.35  Aligned_cols=178  Identities=18%  Similarity=0.203  Sum_probs=113.1

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++...++.+ .++...|+-|-.|+..    ++|+   . 
T Consensus        37 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~----~i~~---~-  107 (294)
T PRK14187         37 VILVGDDPASQLYV-RNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPN----HIDK---N-  107 (294)
T ss_pred             EEEeCCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH---H-
Confidence            44556 44444433 233557899999988777753    3566666666 4678999999999852    2221   1 


Q ss_pred             hhhcceeEEEEeccCC-------eE-EEE------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l-~G~------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                      +.+.+++--. + -||       ++ .|.      ---..|++.-|+..           +.+++||+++|+|.+ -.|+
T Consensus       108 ~i~~~I~p~K-D-VDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGk  174 (294)
T PRK14187        108 LIINTIDPEK-D-VDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTI-----------TRNLSGSDAVVIGRSNIVGK  174 (294)
T ss_pred             HHHhccCccc-C-cccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchH
Confidence            1112221111 0 011       11 121      11356667666542           257999999999987 5899


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      -++..|.+.|+.|+++......   +              .+ ...++|+||.|+|.   |+    .+..++++++.+|+
T Consensus       175 Pla~lL~~~~aTVt~chs~T~~---l--------------~~-~~~~ADIvVsAvGk---p~----~i~~~~ik~gaiVI  229 (294)
T PRK14187        175 PMACLLLGENCTVTTVHSATRD---L--------------AD-YCSKADILVAAVGI---PN----FVKYSWIKKGAIVI  229 (294)
T ss_pred             HHHHHHhhCCCEEEEeCCCCCC---H--------------HH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEE
Confidence            9999999999999998763211   1              11 12458999998884   22    36677899999999


Q ss_pred             EEeeCC
Q 007151          475 DAVYTP  480 (616)
Q Consensus       475 Di~Y~P  480 (616)
                      |+-.++
T Consensus       230 DVGin~  235 (294)
T PRK14187        230 DVGINS  235 (294)
T ss_pred             Eecccc
Confidence            996654

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.62  E-value=0.00053  Score=71.46  Aligned_cols=178  Identities=20%  Similarity=0.259  Sum_probs=113.0

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+..-.. .+..+++|++.....++-    +++.+.++.+ .+.++.|+-|-+|+-.    ++|+   . 
T Consensus        34 ii~vg~d~as~~Yv~~k-~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~----~i~~---~-  104 (287)
T PRK14173         34 VVRLGEDPASVSYVRLK-DRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPP----HIDF---Q-  104 (287)
T ss_pred             EEEeCCCHHHHHHHHHH-HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH---H-
Confidence            44556 44444433333 456799999998777763    3577777777 4677999999999753    2221   1 


Q ss_pred             hhhcceeEEEEeccCC-------eEE-EE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  396 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l~-G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAi  396 (616)
                      +.+.+++--. + -||       +++ |.    ---..|++.-|+..           +.+++||+|+|+|.+ -+|+-+
T Consensus       105 ~i~~~I~p~K-D-VDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPl  171 (287)
T PRK14173        105 RVLEAIDPLK-D-VDGFHPLNVGRLWMGGEALEPCTPAGVVRLLKHY-----------GIPLAGKEVVVVGRSNIVGKPL  171 (287)
T ss_pred             HHHhccCccc-c-ccccChhhhHHHhcCCCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCCccHHHH
Confidence            1222222211 1 011       111 11    12345666666541           367899999999987 589999


Q ss_pred             HHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          397 AYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       397 a~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      +..|.+.|+.|+++.+....   +.              + ...++|+||.|+|.   |+    .+..++++++.+|+|+
T Consensus       172 a~lL~~~~aTVtichs~T~~---l~--------------~-~~~~ADIvIsAvGk---p~----~i~~~~vk~GavVIDV  226 (287)
T PRK14173        172 AALLLREDATVTLAHSKTQD---LP--------------A-VTRRADVLVVAVGR---PH----LITPEMVRPGAVVVDV  226 (287)
T ss_pred             HHHHHHCCCEEEEeCCCCCC---HH--------------H-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEEc
Confidence            99999999999998653221   11              1 12458999999874   22    3567789999999999


Q ss_pred             eeCC
Q 007151          477 VYTP  480 (616)
Q Consensus       477 ~Y~P  480 (616)
                      -.++
T Consensus       227 Gin~  230 (287)
T PRK14173        227 GINR  230 (287)
T ss_pred             cCcc
Confidence            8765

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.62  E-value=0.00058  Score=70.96  Aligned_cols=183  Identities=16%  Similarity=0.229  Sum_probs=113.7

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHH--hhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~--~~lD~ls~  327 (616)
                      .-++| +|-+++.--.. .+..+++|++.....++-    +++...++.+ .++++.|+-|-+|+...+-  ..++.+++
T Consensus        35 ii~vg~d~as~~Yv~~k-~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p  113 (282)
T PRK14166         35 VILVGDNPASQTYVKSK-AKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIIS  113 (282)
T ss_pred             EEEeCCCHHHHHHHHHH-HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc
Confidence            44556 45555444333 446789999987776654    3566666666 4678999999999753221  12211111


Q ss_pred             hHhhhcceeEEEEeccCCeE-EEE-----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKL-FGY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGA  400 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l-~G~-----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L  400 (616)
                      . +-+-..+.+    +-|++ .|.     ---..|++.-|+..           +.++.||+|+|+|-+ -.|+-++..|
T Consensus       114 ~-KDVDGl~~~----N~g~l~~g~~~~~~PcTp~avi~lL~~y-----------~i~l~Gk~vvVvGrS~iVGkPla~lL  177 (282)
T PRK14166        114 S-KDVDGFHPI----NVGYLNLGLESGFLPCTPLGVMKLLKAY-----------EIDLEGKDAVIIGASNIVGRPMATML  177 (282)
T ss_pred             c-cCcccCChh----hhHHHhcCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHHHHHHH
Confidence            1 000111100    00111 121     11256677766542           257899999999987 5899999999


Q ss_pred             HHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          401 KAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       401 ~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      .+.|+.|+++.+.....+                 + ...++|+||.|+|.   |+    .+..++++++.+|+|+-.++
T Consensus       178 ~~~~atVt~chs~T~nl~-----------------~-~~~~ADIvIsAvGk---p~----~i~~~~vk~GavVIDvGin~  232 (282)
T PRK14166        178 LNAGATVSVCHIKTKDLS-----------------L-YTRQADLIIVAAGC---VN----LLRSDMVKEGVIVVDVGINR  232 (282)
T ss_pred             HHCCCEEEEeCCCCCCHH-----------------H-HHhhCCEEEEcCCC---cC----ccCHHHcCCCCEEEEecccc
Confidence            999999999876422111                 1 12458999998884   22    36677899999999998765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.62  E-value=0.00018  Score=73.37  Aligned_cols=74  Identities=23%  Similarity=0.326  Sum_probs=56.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +..+      .....|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            56899999998 699999999999999999999999999998887765321    12221   1110      2346899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        84 li~~ag~~   91 (263)
T PRK06200         84 FVGNAGIW   91 (263)
T ss_pred             EEECCCCc
Confidence            99999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00017  Score=73.67  Aligned_cols=75  Identities=32%  Similarity=0.332  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++++++++...    .|+.+.   .++      .....|
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            357899999998 799999999999999999999999998888888775322    233221   110      234689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ~lv~~ag~~   91 (261)
T PRK08265         83 ILVNLACTY   91 (261)
T ss_pred             EEEECCCCC
Confidence            999998753

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.59  E-value=8.7e-05  Score=71.02  Aligned_cols=111  Identities=22%  Similarity=0.211  Sum_probs=68.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      +++-++|.|-||++++..|.+.|++|+++||++++++++.+.-....-+..++.    .+.|+|+-+.+-+-.  .....
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~----~~~dvvi~~v~~~~~--v~~v~   75 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAA----EQADVVILCVPDDDA--VEAVL   75 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHH----HHBSEEEE-SSSHHH--HHHHH
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHh----hcccceEeecccchh--hhhhh
Confidence            479999999999999999999999999999999999999876211112333332    236999988874311  00000


Q ss_pred             cc---cccccCccEEEEEeeCCc-ccH-HHHHHHHcCCeEEc
Q 007151          462 IP---KHALGHYALVFDAVYTPK-ITR-LLREAEESGATIVS  498 (616)
Q Consensus       462 i~---~~~l~~~~~v~Di~Y~P~-~T~-ll~~A~~~G~~~i~  498 (616)
                      ..   ...+.++.+++|+..... .+. +.+.++++|+.+++
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd  117 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVD  117 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEE
T ss_pred             hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeee
Confidence            11   234567889999987533 333 33334567876553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.59  E-value=0.00015  Score=70.63  Aligned_cols=74  Identities=30%  Similarity=0.418  Sum_probs=59.4

Q ss_pred             ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchh----------cccccCCC
Q 007151          378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLA----------DLENFNPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~----------~l~~~~~~  440 (616)
                      .+..|.++|.|+| |+|||++..|++.|++|.+++++.+.|++.+..++.  .+    +|++          +..+ ...
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k-~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEK-SLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHH-hcC
Confidence            3567899999997 999999999999999999999999999999999875  22    1221          1122 456


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..+++|||+++.
T Consensus        90 ~psvlVncAGIt  101 (256)
T KOG1200|consen   90 TPSVLVNCAGIT  101 (256)
T ss_pred             CCcEEEEcCccc
Confidence            789999999974

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.59  E-value=0.00029  Score=68.53  Aligned_cols=120  Identities=26%  Similarity=0.293  Sum_probs=76.6

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ...+.|+++.|+|.|.+|++++..|...|++|+.++|+...... ....+....+++++    ..++|+|+++.|..  +
T Consensus        31 ~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~~~~~~~l~el----l~~aDiv~~~~plt--~  103 (178)
T PF02826_consen   31 GRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEFGVEYVSLDEL----LAQADIVSLHLPLT--P  103 (178)
T ss_dssp             BS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHTTEEESSHHHH----HHH-SEEEE-SSSS--T
T ss_pred             ccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhh-cccccceeeehhhh----cchhhhhhhhhccc--c
Confidence            35789999999999999999999999999999999998775441 22222233344443    33589999999964  2


Q ss_pred             CCCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      . ....+..+.   ++++.+++++.-.+. +..-+.+|-+.|-..--+++++
T Consensus       104 ~-T~~li~~~~l~~mk~ga~lvN~aRG~~vde~aL~~aL~~g~i~ga~lDV~  154 (178)
T PF02826_consen  104 E-TRGLINAEFLAKMKPGAVLVNVARGELVDEDALLDALESGKIAGAALDVF  154 (178)
T ss_dssp             T-TTTSBSHHHHHTSTTTEEEEESSSGGGB-HHHHHHHHHTTSEEEEEESS-
T ss_pred             c-cceeeeeeeeeccccceEEEeccchhhhhhhHHHHHHhhccCceEEEECC
Confidence            2 122355443   467788888876544 2444455666676554555543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.00026  Score=75.60  Aligned_cols=76  Identities=26%  Similarity=0.402  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.   .+.    .|+.+   +..+      ...
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            467899999998 799999999999999999999999999988877652   221    23322   1111      135


Q ss_pred             CccEEEEcCCCCC
Q 007151          441 DGMILANTTSIGM  453 (616)
Q Consensus       441 ~~divInat~~gm  453 (616)
                      ..|++||+++.+.
T Consensus        84 ~iD~lVnnAG~~~   96 (330)
T PRK06139         84 RIDVWVNNVGVGA   96 (330)
T ss_pred             CCCEEEECCCcCC
Confidence            6899999998753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.57  E-value=0.0002  Score=74.41  Aligned_cols=78  Identities=35%  Similarity=0.457  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchh---ccccc-----
Q 007151          377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLA---DLENF-----  437 (616)
Q Consensus       377 ~~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~------~~----~~~~---~l~~~-----  437 (616)
                      ..+.+|.++|+|++ |+|+++|..|++.|++|++++|+.++.++.+..+..      .+    +++.   +..++     
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            45789999999985 999999999999999999999999998888776542      11    1221   11110     


Q ss_pred             -C-CCCccEEEEcCCCCCC
Q 007151          438 -N-PEDGMILANTTSIGMQ  454 (616)
Q Consensus       438 -~-~~~~divInat~~gm~  454 (616)
                       . ....|++||+++....
T Consensus        84 ~~~~GkidiLvnnag~~~~  102 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGL  102 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCC
Confidence             2 4679999999997643

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=97.57  E-value=0.0027  Score=66.54  Aligned_cols=178  Identities=17%  Similarity=0.173  Sum_probs=111.9

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+.- ..-.+..+++|++..-..++-    +++.+.++.+ .++++.|+-|-.|+-.    ++|+    -
T Consensus        44 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~----~id~----~  114 (299)
T PLN02516         44 VVIVGSRKDSQTYV-NMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPK----HINE----E  114 (299)
T ss_pred             EEEECCChhHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCC----CcCH----H
Confidence            33455 44443332 233456889999986665543    3677777777 4778999999999742    2221    1


Q ss_pred             hhhcceeEEEEeccC-------CeEE-E--E----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSD-------GKLF-G--Y----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~d-------g~l~-G--~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                      +...+++--. + -|       |++. |  .    ---..|++.-|+..           +.+++||+|+|+|-+ -.|+
T Consensus       115 ~i~~~I~p~K-D-VDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVIGRS~iVGk  181 (299)
T PLN02516        115 KILNEISLEK-D-VDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRS-----------GIPIKGKKAVVVGRSNIVGL  181 (299)
T ss_pred             HHHhccCccc-c-cCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchH
Confidence            1222222111 0 01       2222 2  1    12245666666542           368999999999987 5899


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      -++..|.+.|+.|+++.......+                 + ...++|+||.|+|.   |.    .+..++++++.+|+
T Consensus       182 Pla~lL~~~~ATVtvchs~T~nl~-----------------~-~~~~ADIvv~AvGk---~~----~i~~~~vk~gavVI  236 (299)
T PLN02516        182 PVSLLLLKADATVTVVHSRTPDPE-----------------S-IVREADIVIAAAGQ---AM----MIKGDWIKPGAAVI  236 (299)
T ss_pred             HHHHHHHHCCCEEEEeCCCCCCHH-----------------H-HHhhCCEEEEcCCC---cC----ccCHHHcCCCCEEE
Confidence            999999999999999965321111                 1 12457999998874   22    36678899999999


Q ss_pred             EEeeCC
Q 007151          475 DAVYTP  480 (616)
Q Consensus       475 Di~Y~P  480 (616)
                      |+-.+.
T Consensus       237 DvGin~  242 (299)
T PLN02516        237 DVGTNA  242 (299)
T ss_pred             Eeeccc
Confidence            998765

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.56  E-value=0.00074  Score=70.24  Aligned_cols=177  Identities=21%  Similarity=0.264  Sum_probs=112.4

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+.- ..-.+..+++|++.....++-    +++.+.++.+ .++.+.|+-|-.|+-.    ++|+   . 
T Consensus        36 ii~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~----~i~~---~-  106 (284)
T PRK14170         36 VVLVGDNQASRTYV-RNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPE----HISE---E-  106 (284)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCC----CCCH---H-
Confidence            44556 33333333 233557789999987776664    2566677777 4778999999999753    2221   1 


Q ss_pred             hhhcceeEEEEeccCCeEEEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrA  395 (616)
                      +.+.+++--. + -|| ++-+|             --..|++.-|+..           +.++.||+|+|+|-+ -.|+-
T Consensus       107 ~i~~~I~p~K-D-VDG-l~p~N~g~l~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvVvGrS~iVGkP  172 (284)
T PRK14170        107 KVIDTISYDK-D-VDG-FHPVNVGNLFIGKDSFVPCTPAGIIELIKST-----------GTQIEGKRAVVIGRSNIVGKP  172 (284)
T ss_pred             HHHhccCccc-C-ccc-CChhhhhHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchHH
Confidence            1222222211 0 021 11111             1256777766542           368999999999987 58999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|.+.|+.|+++......              +   .+ ...++|+||.|+|.   |.    .+..++++++.+|+|
T Consensus       173 la~lL~~~~atVtichs~T~~--------------l---~~-~~~~ADIvI~AvG~---~~----~i~~~~vk~GavVID  227 (284)
T PRK14170        173 VAQLLLNENATVTIAHSRTKD--------------L---PQ-VAKEADILVVATGL---AK----FVKKDYIKPGAIVID  227 (284)
T ss_pred             HHHHHHHCCCEEEEeCCCCCC--------------H---HH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEE
Confidence            999999999999998653211              1   11 12457999998884   22    366778999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +-.+.
T Consensus       228 vGin~  232 (284)
T PRK14170        228 VGMDR  232 (284)
T ss_pred             ccCcc
Confidence            98775

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.56  E-value=0.0002  Score=73.16  Aligned_cols=74  Identities=23%  Similarity=0.282  Sum_probs=55.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+..+...    .++.+   +.+.      .....|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999998 799999999999999999999999998888876544321    12221   1110      2356899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        83 li~~Ag~~   90 (262)
T TIGR03325        83 LIPNAGIW   90 (262)
T ss_pred             EEECCCCC
Confidence            99999753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.56  E-value=0.00077  Score=70.59  Aligned_cols=183  Identities=21%  Similarity=0.220  Sum_probs=112.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..--+..+++|++..-..++.    +++.+.++.+ .+.++.|+-|-.|+-..+  ...++.+++
T Consensus        37 iI~vgdd~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p  115 (297)
T PRK14186         37 VLRVGDDPASAVYV-RNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDP  115 (297)
T ss_pred             EEEeCCChHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc
Confidence            34555 33333333 233557889999987665543    3677777777 467899999999975322  112222221


Q ss_pred             hHhhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~  401 (616)
                      . +-+-..+..-    -|++ .|.    ---..|++.-|+..           +.+++||+|+|+|-+ -.|+-++..|.
T Consensus       116 ~-KDVDGl~~~n----~g~l~~~~~~~~PcTp~aii~lL~~~-----------~i~l~Gk~vvVIGrS~iVGkPla~lL~  179 (297)
T PRK14186        116 D-KDADGLHPLN----LGRLVKGEPGLRSCTPAGVMRLLRSQ-----------QIDIAGKKAVVVGRSILVGKPLALMLL  179 (297)
T ss_pred             c-cCcccCChhh----HHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHHH
Confidence            1 0000011000    0111 111    12356777766542           367899999999987 58999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      +.|+.|+++.......+                 + ...++|+||.|+|.   |+    .+..++++++.+|+|+-.++
T Consensus       180 ~~~atVtv~hs~T~~l~-----------------~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        180 AANATVTIAHSRTQDLA-----------------S-ITREADILVAAAGR---PN----LIGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             HCCCEEEEeCCCCCCHH-----------------H-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEecccc
Confidence            99999999865321111                 1 12458999998884   32    36678899999999998775

>PRK06196 oxidoreductase; Provisional

Probab=97.55  E-value=0.00026  Score=74.62  Aligned_cols=75  Identities=35%  Similarity=0.467  Sum_probs=56.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhccc---cc------CCCCccE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLADLE---NF------NPEDGMI  444 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~l~---~~------~~~~~di  444 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.. ..  .++.+..   .+      .....|+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            567899999998 7999999999999999999999999998887766532 11  2332221   11      2356899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus       103 li~nAg~~  110 (315)
T PRK06196        103 LINNAGVM  110 (315)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.54  E-value=0.0039  Score=65.38  Aligned_cols=218  Identities=19%  Similarity=0.260  Sum_probs=127.9

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+..+++|++.....++-    +++.+.++.+ .++++.|+-|-.|+-..+  -..++.+++
T Consensus        38 iI~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p  116 (297)
T PRK14168         38 TILVGESPASLSYV-TLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDP  116 (297)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCc
Confidence            34455 44444333 233557889999987655543    3677777777 477899999999964211  111111111


Q ss_pred             hHhhhcceeEEEEeccCCeE-EEE------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYG  399 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l-~G~------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~  399 (616)
                      . +-+-..+..    +-|++ .|.      ---..|++.-|+..           +.+++||+|+|+|.+ -.|+-++..
T Consensus       117 ~-KDVDGl~~~----n~g~l~~~~~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~l  180 (297)
T PRK14168        117 D-KDVDGFHPV----NVGRLMIGGDEVKFLPCTPAGIQEMLVRS-----------GVETSGAEVVVVGRSNIVGKPIANM  180 (297)
T ss_pred             c-ccccccChh----hHHHHhcCCCCCCCcCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcccHHHHHH
Confidence            1 001111110    00111 111      12256777766542           368899999999987 589999999


Q ss_pred             HHHC----CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          400 AKAK----GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       400 L~~~----G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      |.+.    ++.|+++.+....   +              .+ ...++|+||.|+|.   |.    .+..++++++.+|+|
T Consensus       181 L~~~~~~~~atVtv~hs~T~~---l--------------~~-~~~~ADIvVsAvGk---p~----~i~~~~ik~gavVID  235 (297)
T PRK14168        181 MTQKGPGANATVTIVHTRSKN---L--------------AR-HCQRADILIVAAGV---PN----LVKPEWIKPGATVID  235 (297)
T ss_pred             HHhcccCCCCEEEEecCCCcC---H--------------HH-HHhhCCEEEEecCC---cC----ccCHHHcCCCCEEEe
Confidence            9988    6899998653211   1              11 12458999999874   22    366788999999999


Q ss_pred             EeeCCc-------------ccHHHHHHHHc-CC-eEE-cc-----HHHHHHHHHHHHHHHcC
Q 007151          476 AVYTPK-------------ITRLLREAEES-GA-TIV-SG-----LEMFIGQAYEQYERFTG  516 (616)
Q Consensus       476 i~Y~P~-------------~T~ll~~A~~~-G~-~~i-~G-----l~MLv~Qa~~qf~lwtG  516 (616)
                      +-.+..             +-.| +.+++. ++ .-+ .|     ..||++..+.+.+.|.|
T Consensus       236 vGin~~~~~~~~g~~~~~GDVdf-e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~  296 (297)
T PRK14168        236 VGVNRVGTNESTGKAILSGDVDF-DAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLS  296 (297)
T ss_pred             cCCCccCccccCCCcceeccccH-HHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhC
Confidence            965541             1122 223332 21 111 23     56788888888888876

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.54  E-value=0.0011  Score=69.11  Aligned_cols=178  Identities=19%  Similarity=0.244  Sum_probs=111.1

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++.+.++.+ .+..+.|+-|-.|+...+    |+   . 
T Consensus        36 iI~vg~d~as~~Yv-~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i----~~---~-  106 (293)
T PRK14185         36 AILVGHDGGSETYV-ANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHI----SE---Q-  106 (293)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCC----CH---H-
Confidence            44555 33333322 233567899999987666554    3566666666 477899999999975321    11   1 


Q ss_pred             hhhcceeEEEEeccCC-------eEE-EE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KLF-GY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKAL  396 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l~-G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAi  396 (616)
                      +.+.+++--. + -||       ++. |.    ---..|++.-|+..           +.+++||+|+|+|-+ -.|+-+
T Consensus       107 ~i~~~I~p~K-D-VDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~GK~vvViGrS~iVGkPl  173 (293)
T PRK14185        107 KVIEAIDYRK-D-VDGFHPINVGRMSIGLPCFVSATPNGILELLKRY-----------HIETSGKKCVVLGRSNIVGKPM  173 (293)
T ss_pred             HHHhccCccc-C-cCCCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHH
Confidence            1111221111 0 021       111 11    11356777766542           257899999999987 589999


Q ss_pred             HHHHHHC----CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccE
Q 007151          397 AYGAKAK----GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYAL  472 (616)
Q Consensus       397 a~~L~~~----G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~  472 (616)
                      +..|.+.    ++.|+++......   +              .+ ...++|+||.|+|.   |+    .+..++++++.+
T Consensus       174 a~lL~~~~~~~~aTVtvchs~T~n---l--------------~~-~~~~ADIvIsAvGk---p~----~i~~~~vk~gav  228 (293)
T PRK14185        174 AQLMMQKAYPGDCTVTVCHSRSKN---L--------------KK-ECLEADIIIAALGQ---PE----FVKADMVKEGAV  228 (293)
T ss_pred             HHHHHcCCCCCCCEEEEecCCCCC---H--------------HH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCE
Confidence            9999988    5799998543211   1              11 12358999998884   22    366788999999


Q ss_pred             EEEEeeCC
Q 007151          473 VFDAVYTP  480 (616)
Q Consensus       473 v~Di~Y~P  480 (616)
                      |+|+-.++
T Consensus       229 VIDvGin~  236 (293)
T PRK14185        229 VIDVGTTR  236 (293)
T ss_pred             EEEecCcc
Confidence            99998775

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=97.54  E-value=0.00093  Score=71.33  Aligned_cols=178  Identities=22%  Similarity=0.250  Sum_probs=111.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+.+.-- .-.+..+++|++..-..++-    +++.+.++.+ .++++.|+-|-.|+...    +|+    -
T Consensus       108 iIlvG~dpaS~~Yv~-~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~----id~----~  178 (364)
T PLN02616        108 VILVGDRKDSATYVR-NKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSH----MDE----Q  178 (364)
T ss_pred             EEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCC----CCH----H
Confidence            34555 343333222 22457899999976555543    2566677777 46789999999998532    211    1


Q ss_pred             hhhcceeEEEEeccCC-------eEE-EE------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KLF-GY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l~-G~------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                      +.+.+++--. + -||       ++. |.      ----.|++.-|+..           +.+++||+|+|+|-+ -.|+
T Consensus       179 ~i~~aI~P~K-D-VDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y-----------~i~l~GK~vvVIGRS~iVGk  245 (364)
T PLN02616        179 NILNAVSIEK-D-VDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRY-----------NVEIKGKRAVVIGRSNIVGM  245 (364)
T ss_pred             HHHhccCccc-C-cccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccccH
Confidence            1222222211 1 022       221 10      11256777766542           367899999999987 5899


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      -++..|.+.|+.|+++......              +   .+ ...++||||.|+|.   |+    .+..++++++.+|+
T Consensus       246 PLa~LL~~~~ATVTicHs~T~n--------------l---~~-~~r~ADIVIsAvGk---p~----~i~~d~vK~GAvVI  300 (364)
T PLN02616        246 PAALLLQREDATVSIVHSRTKN--------------P---EE-ITREADIIISAVGQ---PN----MVRGSWIKPGAVVI  300 (364)
T ss_pred             HHHHHHHHCCCeEEEeCCCCCC--------------H---HH-HHhhCCEEEEcCCC---cC----cCCHHHcCCCCEEE
Confidence            9999999999999998653211              1   11 12458999998874   22    36677899999999


Q ss_pred             EEeeCC
Q 007151          475 DAVYTP  480 (616)
Q Consensus       475 Di~Y~P  480 (616)
                      |+-.++
T Consensus       301 DVGIn~  306 (364)
T PLN02616        301 DVGINP  306 (364)
T ss_pred             eccccc
Confidence            998765

>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism]

Probab=97.53  E-value=2.8e-05  Score=74.81  Aligned_cols=30  Identities=7%  Similarity=0.055  Sum_probs=28.0

Q ss_pred             cceecccccCCccchhchhhhhhcCceeeh
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      +++||||+|+||||+||.||+.|+.+|+=+
T Consensus         4 ~IvLiG~mGaGKSTIGr~LAk~L~~~F~D~   33 (172)
T COG0703           4 NIVLIGFMGAGKSTIGRALAKALNLPFIDT   33 (172)
T ss_pred             cEEEEcCCCCCHhHHHHHHHHHcCCCcccc
Confidence            689999999999999999999999999854

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.53  E-value=0.00031  Score=71.23  Aligned_cols=75  Identities=29%  Similarity=0.407  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+..   +.    .++.+   +..+      ...
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            578899999998 7999999999999999999999999888877666532   11    12221   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        87 ~~d~li~~ag~~   98 (255)
T PRK07523         87 PIDILVNNAGMQ   98 (255)
T ss_pred             CCCEEEECCCCC
Confidence            589999998764

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.53  E-value=0.0013  Score=68.59  Aligned_cols=177  Identities=19%  Similarity=0.223  Sum_probs=114.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.--.. .++.+++|++.....++-    +++.+.++.+ .++.+.|+-|-.|+-.    ++|+   . 
T Consensus        36 ii~vg~d~as~~Yv~~k-~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~----~id~---~-  106 (286)
T PRK14184         36 VILVGEDPASQVYVRNK-ERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPK----GLDS---Q-  106 (286)
T ss_pred             EEEeCCChhHHHHHHHH-HHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCC----CCCH---H-
Confidence            34556 55555444333 456789999988777664    3577777777 4678999999999753    2221   1 


Q ss_pred             hhhcceeEEEEeccCCeEEEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrA  395 (616)
                      +.+.+++.-. + -|| ++-+|             ---.|++.-|+..           +.+++||+|+|+|-+ -.|+-
T Consensus       107 ~i~~~I~p~K-D-VDG-l~~~N~g~l~~~~~~~~PcTp~av~~lL~~~-----------~i~l~Gk~vvViGrS~iVG~P  172 (286)
T PRK14184        107 RCLELIDPAK-D-VDG-FHPENMGRLALGLPGFRPCTPAGVMTLLERY-----------GLSPAGKKAVVVGRSNIVGKP  172 (286)
T ss_pred             HHHhccCccc-C-ccc-CCHhhHHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHH
Confidence            1222222211 1 022 22222             2245777766542           367899999999987 58999


Q ss_pred             HHHHHHH----CCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCcc
Q 007151          396 LAYGAKA----KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA  471 (616)
Q Consensus       396 ia~~L~~----~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~  471 (616)
                      ++..|.+    .|+.|+++..+....++                  ...++|+||.|++.   |.    .+..++++++.
T Consensus       173 la~lL~~~~~~~~AtVt~~hs~t~~l~~------------------~~~~ADIVI~AvG~---p~----li~~~~vk~Ga  227 (286)
T PRK14184        173 LALMLGAPGKFANATVTVCHSRTPDLAE------------------ECREADFLFVAIGR---PR----FVTADMVKPGA  227 (286)
T ss_pred             HHHHHhCCcccCCCEEEEEeCCchhHHH------------------HHHhCCEEEEecCC---CC----cCCHHHcCCCC
Confidence            9999998    78999998765322111                  12347999998863   32    36677889999


Q ss_pred             EEEEEeeCC
Q 007151          472 LVFDAVYTP  480 (616)
Q Consensus       472 ~v~Di~Y~P  480 (616)
                      +|+|+-.++
T Consensus       228 vVIDVGi~~  236 (286)
T PRK14184        228 VVVDVGINR  236 (286)
T ss_pred             EEEEeeeec
Confidence            999998775

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.53  E-value=0.00022  Score=73.65  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHH---HHHHHHHHCCc-c--cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDR---ARELAETVGGH-A--LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~k---a~~la~~~~~~-~--~~~~~---l~~~------~~  439 (616)
                      .+++|.++|+|++   |+|+++|.+|++.|++|++++|+.+.   .+++.++.+.. .  .|+.+   +..+      ..
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3678999999996   89999999999999999999997543   33444443321 1  23322   1111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        84 g~iD~lVnnAG~~   96 (271)
T PRK06505         84 GKLDFVVHAIGFS   96 (271)
T ss_pred             CCCCEEEECCccC
Confidence            5789999999864

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=97.52  E-value=0.0024  Score=66.01  Aligned_cols=182  Identities=18%  Similarity=0.226  Sum_probs=117.2

Q ss_pred             EEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchH-----HHHhhhccc
Q 007151          256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKE-----AAVKCCDEV  325 (616)
Q Consensus       256 ~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~-----~v~~~lD~l  325 (616)
                      .-++|+--+....-.+-.+..++.|+...+..++.    +++...++.+ .++++.|+-|-.|.=.     .++..++- 
T Consensus        35 vilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p-  113 (283)
T COG0190          35 VILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLDEQKLLQAIDP-  113 (283)
T ss_pred             EEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCc-
Confidence            34566444433444566788999999988777753    3677777666 5788999999999632     22222210 


Q ss_pred             cHhHhhhcceeEEEEeccCCeEE-E---E-ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHH
Q 007151          326 DTVAKSIGAVNCIIRRQSDGKLF-G---Y-NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYG  399 (616)
Q Consensus       326 s~~A~~iGAVNTIv~~~~dg~l~-G---~-NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~  399 (616)
                      +..+.-..-.|       -|++. |   + --.-.|++..|+..           +.++.||+++|+|.|. .||-++..
T Consensus       114 ~KDVDG~hp~N-------~g~L~~~~~~~~PCTp~gi~~ll~~~-----------~i~l~Gk~~vVVGrS~iVGkPla~l  175 (283)
T COG0190         114 EKDVDGFHPYN-------LGKLAQGEPGFLPCTPAGIMTLLEEY-----------GIDLRGKNVVVVGRSNIVGKPLALL  175 (283)
T ss_pred             CCCccccChhH-------hcchhcCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcCcHHHHHH
Confidence            00011111111       12333 2   0 12257888887753           2688999999999985 79999999


Q ss_pred             HHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          400 AKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       400 L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      |...++.|+++.+....   +              .+ ...++|++|.|++..   +    -+..+++.++.+|+|+=.+
T Consensus       176 L~~~naTVtvcHs~T~~---l--------------~~-~~k~ADIvv~AvG~p---~----~i~~d~vk~gavVIDVGin  230 (283)
T COG0190         176 LLNANATVTVCHSRTKD---L--------------AS-ITKNADIVVVAVGKP---H----FIKADMVKPGAVVIDVGIN  230 (283)
T ss_pred             HHhCCCEEEEEcCCCCC---H--------------HH-HhhhCCEEEEecCCc---c----ccccccccCCCEEEecCCc
Confidence            99999999999764211   1              11 234589999988842   2    2556788888999998665


Q ss_pred             Cc
Q 007151          480 PK  481 (616)
Q Consensus       480 P~  481 (616)
                      ..
T Consensus       231 rv  232 (283)
T COG0190         231 RV  232 (283)
T ss_pred             cc
Confidence            43

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00025  Score=71.99  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=56.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..   ..    .++.+   +.++      ...
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999998 7999999999999999999999999998888877631   11    22221   1110      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        86 ~id~lv~~ag~~   97 (253)
T PRK05867         86 GIDIAVCNAGII   97 (253)
T ss_pred             CCCEEEECCCCC
Confidence            689999998764

>PRK05717 oxidoreductase; Validated

Probab=97.51  E-value=0.00031  Score=71.38  Aligned_cols=76  Identities=26%  Similarity=0.364  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cc----cc--CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LE----NF--NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~----~~--~~~~~  442 (616)
                      ..+++|+++|+|+ |++|++++..|.+.|++|++++|+.++++++.+.++...    .++.+   +.    ..  .....
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999998 799999999999999999999999888888777665321    23222   11    10  12457


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        86 d~li~~ag~~   95 (255)
T PRK05717         86 DALVCNAAIA   95 (255)
T ss_pred             CEEEECCCcc
Confidence            9999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00034  Score=72.39  Aligned_cols=75  Identities=17%  Similarity=0.244  Sum_probs=56.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~  441 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+   +.++      ....
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999997 7999999999999999999999999888887766532   11    23322   1110      2346


Q ss_pred             ccEEEEcCCCCC
Q 007151          442 GMILANTTSIGM  453 (616)
Q Consensus       442 ~divInat~~gm  453 (616)
                      .|++||+++...
T Consensus        84 id~li~nAg~~~   95 (275)
T PRK05876         84 VDVVFSNAGIVV   95 (275)
T ss_pred             CCEEEECCCcCC
Confidence            899999998753

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00033  Score=70.52  Aligned_cols=73  Identities=12%  Similarity=0.253  Sum_probs=54.6

Q ss_pred             cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cch---hccccc------CCC-
Q 007151          379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSL---ADLENF------NPE-  440 (616)
Q Consensus       379 l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~---~~l~~~------~~~-  440 (616)
                      +++|+++|+|++ |+|++++..|++.|++|++++|+.++.+++.+++.   ...    +++   +++.++      ..+ 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            568999999985 99999999999999999999999999888876552   211    122   111111      234 


Q ss_pred             CccEEEEcCCC
Q 007151          441 DGMILANTTSI  451 (616)
Q Consensus       441 ~~divInat~~  451 (616)
                      ..|++||+++.
T Consensus        83 ~iD~li~nag~   93 (227)
T PRK08862         83 APDVLVNNWTS   93 (227)
T ss_pred             CCCEEEECCcc
Confidence            68999999874

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00034  Score=73.16  Aligned_cols=76  Identities=30%  Similarity=0.391  Sum_probs=57.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   ...    .|+.+   +.++      ..
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4577899999998 799999999999999999999999999888877653   111    22222   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++.+
T Consensus       116 g~id~li~~AG~~  128 (293)
T PRK05866        116 GGVDILINNAGRS  128 (293)
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.00028  Score=71.77  Aligned_cols=75  Identities=28%  Similarity=0.331  Sum_probs=56.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~---l~~~------~  438 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..     ..    .++.+   +..+      .
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999998 7999999999999999999999999998888777632     11    22222   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        84 ~g~id~li~~ag~~   97 (260)
T PRK07063         84 FGPLDVLVNNAGIN   97 (260)
T ss_pred             hCCCcEEEECCCcC
Confidence            34689999999864

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.49  E-value=0.00017  Score=62.38  Aligned_cols=86  Identities=28%  Similarity=0.355  Sum_probs=61.2

Q ss_pred             EEEEEccchhHHHHHHHHHHCC---CeEEEE-ECCHHHHHHHHHHHCCccc--chhcccccCCCCccEEEEcCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG---ARVVIA-NRTYDRARELAETVGGHAL--SLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G---~~V~v~-nRt~~ka~~la~~~~~~~~--~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      |+.|+|+|.+|.+++..|.+.|   .+|+++ +|+++++++++++++....  +..+.    ..++|+||.|++....+.
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~advvilav~p~~~~~   76 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEA----AQEADVVILAVKPQQLPE   76 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHH----HHHTSEEEE-S-GGGHHH
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHh----hccCCEEEEEECHHHHHH
Confidence            5788999999999999999999   689965 9999999999999875433  22222    234799999998653321


Q ss_pred             CCCCccccc--cccCccEEEEEe
Q 007151          457 VDETPIPKH--ALGHYALVFDAV  477 (616)
Q Consensus       457 ~~~~pi~~~--~l~~~~~v~Di~  477 (616)
                           +..+  ...+.++++|+.
T Consensus        77 -----v~~~i~~~~~~~~vis~~   94 (96)
T PF03807_consen   77 -----VLSEIPHLLKGKLVISIA   94 (96)
T ss_dssp             -----HHHHHHHHHTTSEEEEES
T ss_pred             -----HHHHHhhccCCCEEEEeC
Confidence                 2111  245667888875

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.47  E-value=0.0011  Score=69.33  Aligned_cols=183  Identities=18%  Similarity=0.243  Sum_probs=113.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++...++.+ .+.++.|+-|-+|+...+  ...++.++|
T Consensus        36 iI~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p  114 (297)
T PRK14167         36 TVLMSDDPASETYV-SMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDP  114 (297)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCc
Confidence            44556 44444333 233567899999998777764    3577777777 477899999999975322  112222222


Q ss_pred             hHhhhcceeEEEEeccCCeE-EEEe----cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKL-FGYN----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAK  401 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l-~G~N----TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~  401 (616)
                      . +-+-..+..    +-|++ .|.+    --..|++.-|+..           +.+++||+|+|+|.+ -.|+-++..|.
T Consensus       115 ~-KDVDGl~~~----n~g~l~~g~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL~  178 (297)
T PRK14167        115 A-KDVDGFHPE----NVGRLVAGDARFKPCTPHGIQKLLAAA-----------GVDTEGADVVVVGRSDIVGKPMANLLI  178 (297)
T ss_pred             c-cCcccCChh----hhHHHhCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCcccHHHHHHHHh
Confidence            1 000111110    00111 1211    2356777766542           257899999999987 58999999999


Q ss_pred             HC----CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEe
Q 007151          402 AK----GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       402 ~~----G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      +.    ++.|+++......   +.              + ...++|+||.|+|.   |.    .+..++++++.+|+|+-
T Consensus       179 ~~~~~~~aTVtvchs~T~~---l~--------------~-~~~~ADIvIsAvGk---p~----~i~~~~ik~gaiVIDvG  233 (297)
T PRK14167        179 QKADGGNATVTVCHSRTDD---LA--------------A-KTRRADIVVAAAGV---PE----LIDGSMLSEGATVIDVG  233 (297)
T ss_pred             cCccCCCCEEEEeCCCCCC---HH--------------H-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEcc
Confidence            87    7899998543211   11              1 12458999998884   22    36677899999999998


Q ss_pred             eCC
Q 007151          478 YTP  480 (616)
Q Consensus       478 Y~P  480 (616)
                      .++
T Consensus       234 in~  236 (297)
T PRK14167        234 INR  236 (297)
T ss_pred             ccc
Confidence            775

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.0004  Score=71.28  Aligned_cols=74  Identities=30%  Similarity=0.353  Sum_probs=56.2

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-Ccc--cchhcccc-------c--CCCCccEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHA--LSLADLEN-------F--NPEDGMIL  445 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-~~~--~~~~~l~~-------~--~~~~~div  445 (616)
                      +++++++|+|+ ||+|++++..|.+.|++|.++.|+.++++++.+.++ ...  .|+.+.++       .  .....|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999998 799999999999999999999999999988877665 211  23322111       0  23568999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        83 i~~ag~~   89 (273)
T PRK07825         83 VNNAGVM   89 (273)
T ss_pred             EECCCcC
Confidence            9999865

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.46  E-value=0.0014  Score=68.18  Aligned_cols=183  Identities=18%  Similarity=0.235  Sum_probs=114.2

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHH--hhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAV--KCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~--~~lD~ls~  327 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++.+.++.+ .+.++.|+-|-.|.-..+-  ..++.++|
T Consensus        31 iI~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p  109 (287)
T PRK14181         31 VVLIGNDPASEVYV-GMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISP  109 (287)
T ss_pred             EEEeCCCHHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCc
Confidence            44556 44444333 344567899999988777754    3677777777 4778999999999753221  12222221


Q ss_pred             hHhhhcceeEEEEeccCCeEE-EE-----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHH
Q 007151          328 VAKSIGAVNCIIRRQSDGKLF-GY-----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGA  400 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~-G~-----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L  400 (616)
                      . +-+-..+..    +-|+++ |.     ---..|++.-|+..           +.+++||+|+|+|-+ -.|+-++..|
T Consensus       110 ~-KDVDGl~p~----n~g~l~~g~~~~~~PcTp~avi~lL~~~-----------~i~l~Gk~vvViGrS~iVGkPla~lL  173 (287)
T PRK14181        110 D-KDVDGLHPV----NMGKLLLGETDGFIPCTPAGIIELLKYY-----------EIPLHGRHVAIVGRSNIVGKPLAALL  173 (287)
T ss_pred             c-cCcccCChh----hHHHHhcCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCccchHHHHHHH
Confidence            1 000001100    001121 21     11246777766542           367899999999987 5899999999


Q ss_pred             HHC----CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          401 KAK----GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       401 ~~~----G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .++    ++.|+++.+....   +              .+ ...++|+||.|+|.   |.    .+..++++++.+|+|+
T Consensus       174 ~~~~~~~~AtVtvchs~T~~---l--------------~~-~~~~ADIvV~AvG~---p~----~i~~~~ik~GavVIDv  228 (287)
T PRK14181        174 MQKHPDTNATVTLLHSQSEN---L--------------TE-ILKTADIIIAAIGV---PL----FIKEEMIAEKAVIVDV  228 (287)
T ss_pred             HhCcCCCCCEEEEeCCCCCC---H--------------HH-HHhhCCEEEEccCC---cC----ccCHHHcCCCCEEEEe
Confidence            998    7899998753211   1              11 12458999999884   22    3667889999999999


Q ss_pred             eeCC
Q 007151          477 VYTP  480 (616)
Q Consensus       477 ~Y~P  480 (616)
                      -.++
T Consensus       229 Gin~  232 (287)
T PRK14181        229 GTSR  232 (287)
T ss_pred             cccc
Confidence            8775

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00035  Score=71.29  Aligned_cols=75  Identities=25%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~---l~~~------~  438 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++..     ..    .|+.+   +.++      .
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            578899999998 6999999999999999999999999888777665421     11    12222   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        85 ~g~id~li~~Ag~~   98 (265)
T PRK07062         85 FGGVDMLVNNAGQG   98 (265)
T ss_pred             cCCCCEEEECCCCC
Confidence            35689999999864

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.45  E-value=0.00062  Score=76.28  Aligned_cols=47  Identities=26%  Similarity=0.307  Sum_probs=39.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      .+.+++++|+|.||+|++++..|.+.|++|++++|+..+..++.++.
T Consensus        12 ~~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~   58 (473)
T PRK00141         12 QELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVT   58 (473)
T ss_pred             cccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhc
Confidence            56789999999999999999999999999999999876654444443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.43  E-value=0.0003  Score=69.13  Aligned_cols=74  Identities=24%  Similarity=0.317  Sum_probs=56.8

Q ss_pred             cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cccchhccc---cc------CCCCccEE
Q 007151          379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HALSLADLE---NF------NPEDGMIL  445 (616)
Q Consensus       379 l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~~~~~~l~---~~------~~~~~div  445 (616)
                      +.|-++||+|+| |+|++.|..+.++|-+|.|++|+.++.++..+....   .++|+.|..   ++      ...+.+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            356789999986 999999999999999999999999998887765542   233443321   11      34568999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||++|..
T Consensus        83 iNNAGIq   89 (245)
T COG3967          83 INNAGIQ   89 (245)
T ss_pred             eeccccc
Confidence            9999974

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.43  E-value=0.00087  Score=74.32  Aligned_cols=72  Identities=28%  Similarity=0.347  Sum_probs=48.1

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---CcccchhcccccCCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~---~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      +++|+++|+|+|++|.++|..|++.|++|++++++. +..++..+++.   ..... .+..+.....+|+||++++.
T Consensus         3 ~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~d~vv~~~g~   78 (450)
T PRK14106          3 LKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPEEFLEGVDLVVVSPGV   78 (450)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcchhHhhcCCEEEECCCC
Confidence            568999999999999999999999999999999975 34444333332   11111 11111022457888887654

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.00049  Score=69.00  Aligned_cols=76  Identities=32%  Similarity=0.346  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcc---ccc--CCCCccEEEEc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADL---ENF--NPEDGMILANT  448 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l---~~~--~~~~~divIna  448 (616)
                      .++++++++|+|+ |++|+.++..|++.|++|++++|+.++++++++..+...  .++.+.   ...  .....|+|||+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            4577899999998 799999999999999999999999999888887765432  233221   111  12457999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        85 ag~~   88 (245)
T PRK07060         85 AGIA   88 (245)
T ss_pred             CCCC
Confidence            9864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.43  E-value=0.00037  Score=71.01  Aligned_cols=74  Identities=19%  Similarity=0.215  Sum_probs=51.6

Q ss_pred             ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|++   |+|++++.+|++.|++|++..|+. +.++..+++.. ..    +|+.+   +.++      ...
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999985   999999999999999999999984 44444444321 11    23321   1110      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        83 ~iD~lv~nAg~~   94 (252)
T PRK06079         83 KIDGIVHAIAYA   94 (252)
T ss_pred             CCCEEEEccccc
Confidence            689999999764

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.00041  Score=70.29  Aligned_cols=74  Identities=26%  Similarity=0.289  Sum_probs=55.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~~  441 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   +.    .++.+.   ..+      ....
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999998 6999999999999999999999999998888776531   11    222211   110      2346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        84 id~li~~ag~~   94 (254)
T PRK07478         84 LDIAFNNAGTL   94 (254)
T ss_pred             CCEEEECCCCC
Confidence            89999999863

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.00039  Score=72.85  Aligned_cols=75  Identities=31%  Similarity=0.378  Sum_probs=55.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhccc---cc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLADLE---NF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~l~---~~------~  438 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.+++++..+++.     ...    +++.+.+   .+      .
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            568899999998 899999999999999999999999988776655442     111    2332211   10      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        93 ~~~iD~li~nAg~~  106 (306)
T PRK06197         93 YPRIDLLINNAGVM  106 (306)
T ss_pred             CCCCCEEEECCccc
Confidence            34689999999865

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.41  E-value=0.00042  Score=71.80  Aligned_cols=74  Identities=15%  Similarity=0.278  Sum_probs=53.0

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchhcccc---c------CCC
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLADLEN---F------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~-~--~~~~~l~~---~------~~~  440 (616)
                      +++|.++|+|+   +|+|++++..|++.|++|+++.|+.   ++++++.++++.. .  +|+.+.++   +      ...
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999998   4999999999999999999999984   4555565555432 1  23322111   0      245


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        83 ~iDilVnnAG~~   94 (274)
T PRK08415         83 KIDFIVHSVAFA   94 (274)
T ss_pred             CCCEEEECCccC
Confidence            689999999864

>PRK08589 short chain dehydrogenase; Validated

Probab=97.41  E-value=0.00049  Score=70.85  Aligned_cols=74  Identities=26%  Similarity=0.420  Sum_probs=54.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+ ++.+++++++.   ...    +|+.+   +..+      ...
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            357899999998 799999999999999999999999 77777766652   111    22221   1110      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        82 ~id~li~~Ag~~   93 (272)
T PRK08589         82 RVDVLFNNAGVD   93 (272)
T ss_pred             CcCEEEECCCCC
Confidence            689999999864

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.40  E-value=0.00041  Score=69.78  Aligned_cols=74  Identities=34%  Similarity=0.469  Sum_probs=54.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Cc----ccchhc---cccc------CCCCc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH----ALSLAD---LENF------NPEDG  442 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~--~~----~~~~~~---l~~~------~~~~~  442 (616)
                      +++++++|+|+ |++|++++..|.+.|++|++++|+.++.+++...+.  ..    ..++.+   +...      .....
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            56889999998 799999999999999999999999988888777654  11    122221   1110      12458


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+||++++..
T Consensus        83 d~vi~~ag~~   92 (251)
T PRK07231         83 DILVNNAGTT   92 (251)
T ss_pred             CEEEECCCCC
Confidence            9999998753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.40  E-value=0.00057  Score=70.34  Aligned_cols=76  Identities=30%  Similarity=0.389  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   .+.    .++.+   +..+      ..
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578899999998 799999999999999999999999988888877652   111    22221   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        86 g~id~li~~ag~~   98 (278)
T PRK08277         86 GPCDILINGAGGN   98 (278)
T ss_pred             CCCCEEEECCCCC
Confidence            5689999999864

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.38  E-value=0.00062  Score=69.61  Aligned_cols=76  Identities=22%  Similarity=0.210  Sum_probs=53.4

Q ss_pred             cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHHHCCc-c--cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYD---RARELAETVGGH-A--LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~---ka~~la~~~~~~-~--~~~~~---l~~~------~  438 (616)
                      .++++|.++|+|++   |+|++++..|++.|++|++++|+.+   +.++++++++.. .  +|+.+   +..+      .
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            45789999999974   8999999999999999999999853   345555555421 1  23221   1111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|++||+++..
T Consensus        86 ~g~ld~lv~nAg~~   99 (258)
T PRK07533         86 WGRLDFLLHSIAFA   99 (258)
T ss_pred             cCCCCEEEEcCccC
Confidence            35689999998764

>PRK09242 tropinone reductase; Provisional

Probab=97.37  E-value=0.00054  Score=69.59  Aligned_cols=76  Identities=24%  Similarity=0.266  Sum_probs=57.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---ccc----c--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LEN----F--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~---l~~----~--  437 (616)
                      .++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++..     ..    +++.+   +..    .  
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999998 7999999999999999999999999988888766521     11    23221   111    0  


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|+|||+++..
T Consensus        85 ~~g~id~li~~ag~~   99 (257)
T PRK09242         85 HWDGLHILVNNAGGN   99 (257)
T ss_pred             HcCCCCEEEECCCCC
Confidence            235689999999864

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.36  E-value=0.0048  Score=64.72  Aligned_cols=178  Identities=20%  Similarity=0.229  Sum_probs=113.8

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.- ..-.+.++++|++.....++-    +++.+.++.+ .++++.|+-|-.|+..    ++|+   ..
T Consensus        36 ii~vg~d~as~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~----~id~---~~  107 (295)
T PRK14174         36 VIIVGEDPASQVYV-RNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPK----QIDE---FA  107 (295)
T ss_pred             EEEeCCChHHHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC----CCCH---HH
Confidence            44556 44444333 233567899999998877764    3677777777 4778999999999852    2221   11


Q ss_pred             hhhcceeEEEEeccCC-------eEE-EE--e----cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHH
Q 007151          330 KSIGAVNCIIRRQSDG-------KLF-GY--N----TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGK  394 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg-------~l~-G~--N----TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-Gagr  394 (616)
                       ...+++--. + -||       +++ |.  +    --..|++.-|+..           +.+++||+|+|+|.+ -.|+
T Consensus       108 -i~~~I~p~K-D-VDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y-----------~i~l~Gk~vvViGrS~iVG~  173 (295)
T PRK14174        108 -VTLAIDPAK-D-VDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRY-----------NIETKGKHCVVVGRSNIVGK  173 (295)
T ss_pred             -HHhcCCccc-c-ccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCCcchH
Confidence             111222111 1 011       221 21  1    2345666665532           257899999999987 5899


Q ss_pred             HHHHHHHH----CCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCc
Q 007151          395 ALAYGAKA----KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY  470 (616)
Q Consensus       395 Aia~~L~~----~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~  470 (616)
                      -++..|.+    .|+.|+++..+....++.                  ..++|+||.|++.   |.    .+..++++++
T Consensus       174 Pla~lL~~~~~~~~atVt~~hs~t~~l~~~------------------~~~ADIvI~Avg~---~~----li~~~~vk~G  228 (295)
T PRK14174        174 PMANLMLQKLKESNCTVTICHSATKDIPSY------------------TRQADILIAAIGK---AR----FITADMVKPG  228 (295)
T ss_pred             HHHHHHHhccccCCCEEEEEeCCchhHHHH------------------HHhCCEEEEecCc---cC----ccCHHHcCCC
Confidence            99999987    688999988754332221                  2347999998863   21    3677888999


Q ss_pred             cEEEEEeeCC
Q 007151          471 ALVFDAVYTP  480 (616)
Q Consensus       471 ~~v~Di~Y~P  480 (616)
                      .+++|+-.+.
T Consensus       229 avVIDVgi~~  238 (295)
T PRK14174        229 AVVIDVGINR  238 (295)
T ss_pred             CEEEEeeccc
Confidence            9999998765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.36  E-value=0.00056  Score=69.36  Aligned_cols=75  Identities=28%  Similarity=0.374  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|.+.|++|++.+|+.++.+++.+++..   ..    .++.+   +.++      ...
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            467899999998 6999999999999999999999999888888776531   11    22222   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        86 ~id~vi~~ag~~   97 (254)
T PRK08085         86 PIDVLINNAGIQ   97 (254)
T ss_pred             CCCEEEECCCcC
Confidence            689999999853

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00055  Score=68.82  Aligned_cols=74  Identities=23%  Similarity=0.240  Sum_probs=55.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.++++...    .++.+   +..+      .....|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46789999998 799999999999999999999999888888877765432    12221   1110      2346899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        84 vi~~ag~~   91 (249)
T PRK06500         84 VFINAGVA   91 (249)
T ss_pred             EEECCCCC
Confidence            99998754

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.00059  Score=69.31  Aligned_cols=75  Identities=29%  Similarity=0.402  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~div  445 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+..+.+++.++++...  .++.+   +..+      .....|++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999998 799999999999999999999999888887777664322  22221   1110      12467999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        84 i~~ag~~   90 (255)
T PRK06057         84 FNNAGIS   90 (255)
T ss_pred             EECCCcC
Confidence            9998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.35  E-value=0.00051  Score=70.70  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=50.0

Q ss_pred             cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~-~--~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|++   |+|++++..|++.|++|++++|+.   +.++++....+.. .  +|+.+   +..+      ...
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            578999999985   899999999999999999998873   2333333332211 1  23322   1111      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++.+
T Consensus        84 ~iD~linnAg~~   95 (262)
T PRK07984         84 KFDGFVHSIGFA   95 (262)
T ss_pred             CCCEEEECCccC
Confidence            689999999864

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.34  E-value=0.00072  Score=74.36  Aligned_cols=70  Identities=30%  Similarity=0.366  Sum_probs=54.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+.|++|+|+|.|.+|+.++..|...|++|+++++++.++...+.. +....+++++    ...+|++|.+|+.
T Consensus       208 ~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-G~~v~~l~ea----l~~aDVVI~aTG~  277 (425)
T PRK05476        208 VLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-GFRVMTMEEA----AELGDIFVTATGN  277 (425)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-CCEecCHHHH----HhCCCEEEECCCC
Confidence            35689999999999999999999999999999999999887554332 4443344332    3458999998863

>PLN02253 xanthoxin dehydrogenase

Probab=97.34  E-value=0.00062  Score=70.11  Aligned_cols=76  Identities=21%  Similarity=0.323  Sum_probs=56.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhcc---ccc------CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~l---~~~------~~~  440 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.+..++++++++.  ..    .|+.+.   .++      ...
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3567899999998 7999999999999999999999998888888776642  11    233221   110      134


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        94 ~id~li~~Ag~~  105 (280)
T PLN02253         94 TLDIMVNNAGLT  105 (280)
T ss_pred             CCCEEEECCCcC
Confidence            689999999753

>PRK06720 hypothetical protein; Provisional

Probab=97.33  E-value=0.00096  Score=64.44  Aligned_cols=76  Identities=24%  Similarity=0.362  Sum_probs=55.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchh---ccccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLA---DLENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~---~l~~~------~~  439 (616)
                      ..+++|.++|+|+ ||+|++++..|.+.|++|++++|+.+.+++.++++   +...    .++.   ++.++      ..
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3467899999998 58999999999999999999999988877766655   2211    1221   11110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        92 G~iDilVnnAG~~  104 (169)
T PRK06720         92 SRIDMLFQNAGLY  104 (169)
T ss_pred             CCCCEEEECCCcC
Confidence            5689999998754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.33  E-value=0.0003  Score=67.28  Aligned_cols=76  Identities=25%  Similarity=0.301  Sum_probs=59.3

Q ss_pred             ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhccc---cc--CCCCccEEEE
Q 007151          378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLE---NF--NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l~---~~--~~~~~divIn  447 (616)
                      .+.|+.++++|+| |+|++++..|++.|++|+-+.|+++....|.++.....    .++.+++   +.  .....|.+||
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            4679999999998 99999999999999999999999999999988765422    2333322   21  1234799999


Q ss_pred             cCCCCC
Q 007151          448 TTSIGM  453 (616)
Q Consensus       448 at~~gm  453 (616)
                      ++++..
T Consensus        84 NAgvA~   89 (245)
T KOG1207|consen   84 NAGVAT   89 (245)
T ss_pred             cchhhh
Confidence            998753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.32  E-value=0.00055  Score=70.77  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=53.7

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCcc---cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHA---LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~~---~~~~~---l~~~------~~  439 (616)
                      -+++|+++|+|+   +|+|+++|..|++.|++|++..|+.   +++++++++++...   .|+.+   ++.+      ..
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            467899999998   5999999999999999999988863   55666666654311   23221   1111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        87 g~iD~lv~nAG~~   99 (272)
T PRK08159         87 GKLDFVVHAIGFS   99 (272)
T ss_pred             CCCcEEEECCccc
Confidence            5689999999864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.32  E-value=0.00052  Score=68.24  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=51.2

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+++||+|+|+|+|.+|...+..|.+.|++|+|++++.. ..+++++........ .......+.++|+||.||+-
T Consensus         5 ~l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~-~~~~~~~l~~adlViaaT~d   80 (202)
T PRK06718          5 MIDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQ-KEFEPSDIVDAFLVIAATND   80 (202)
T ss_pred             EEEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEe-cCCChhhcCCceEEEEcCCC
Confidence            4578999999999999999999999999999999998753 334454431111100 11111134567888888763

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.31  E-value=0.00087  Score=74.24  Aligned_cols=38  Identities=24%  Similarity=0.202  Sum_probs=34.2

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      +++|+++|+|+|++|++++..|++.|++|++.+++...
T Consensus         3 ~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~   40 (447)
T PRK02472          3 YQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFS   40 (447)
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCcc
Confidence            46899999999999999999999999999999986543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.31  E-value=0.00072  Score=71.47  Aligned_cols=74  Identities=24%  Similarity=0.298  Sum_probs=55.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~~  441 (616)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++..   ..    .++.+..   .+      ....
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            45789999998 7999999999999999999999999999888777631   11    2332211   11      1235


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        84 iD~li~nAg~~   94 (322)
T PRK07453         84 LDALVCNAAVY   94 (322)
T ss_pred             ccEEEECCccc
Confidence            89999999864

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.31  E-value=0.00058  Score=72.19  Aligned_cols=72  Identities=24%  Similarity=0.374  Sum_probs=54.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc--------cchhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA--------LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~--------~~~~~l~~~~~~~~divInat~~  451 (616)
                      +++.|+|+|++|+++++.|+..|.  +|++++|+.++++.++.++....        +...+.+  ...++|++|+|++.
T Consensus         1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~--~l~~aDIVIitag~   78 (306)
T cd05291           1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS--DCKDADIVVITAGA   78 (306)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH--HhCCCCEEEEccCC
Confidence            379999999999999999999995  89999999999999988773210        1111112  24578999999987


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      .-.|
T Consensus        79 ~~~~   82 (306)
T cd05291          79 PQKP   82 (306)
T ss_pred             CCCC
Confidence            5444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.00066  Score=72.50  Aligned_cols=75  Identities=25%  Similarity=0.363  Sum_probs=56.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   .+.    .|+.+   +..+      ...
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            467899999998 799999999999999999999999998888876652   221    23222   1111      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        85 ~iD~lInnAg~~   96 (334)
T PRK07109         85 PIDTWVNNAMVT   96 (334)
T ss_pred             CCCEEEECCCcC
Confidence            689999999865

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.31  E-value=0.00063  Score=69.20  Aligned_cols=75  Identities=24%  Similarity=0.335  Sum_probs=51.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      ++++|+++|+|+ ||+|++++.+|++.|++|++++|+.. +..+..+..+.+.    .|+.+   +..+      ..+..
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999998 69999999999999999999998643 2233333333221    23221   1110      23568


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        85 D~lv~~ag~~   94 (251)
T PRK12481         85 DILINNAGII   94 (251)
T ss_pred             CEEEECCCcC
Confidence            9999999864

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.30  E-value=0.00077  Score=68.45  Aligned_cols=74  Identities=36%  Similarity=0.419  Sum_probs=56.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++...    .++.+   +..+      .....|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56789999998 799999999999999999999999999888887765321    22211   1110      2346899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        84 li~~ag~~   91 (257)
T PRK07067         84 LFNNAALF   91 (257)
T ss_pred             EEECCCcC
Confidence            99998754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.28  E-value=0.00061  Score=69.62  Aligned_cols=75  Identities=20%  Similarity=0.248  Sum_probs=53.9

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHCCcc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~--~ka~~la~~~~~~~----~~~~~---l~~~------~~  439 (616)
                      .+++|+++|+|+   +|+|++++..|++.|++|++.+|+.  +..++++++++...    +|+.+   +.++      ..
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            367899999996   6999999999999999999998763  55667766654321    23222   1111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        84 g~iD~li~nAG~~   96 (256)
T PRK07889         84 DGLDGVVHSIGFA   96 (256)
T ss_pred             CCCcEEEEccccc
Confidence            5689999999864

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00071  Score=68.86  Aligned_cols=75  Identities=31%  Similarity=0.352  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhcccc---c--CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLADLEN---F--NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~l~~---~--~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++.    ...    .++.+.++   +  .....|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            467899999998 699999999999999999999999998888766553    111    23222111   1  235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        84 ~lv~~ag~~   92 (259)
T PRK06125         84 ILVNNAGAI   92 (259)
T ss_pred             EEEECCCCC
Confidence            999998753

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.00088  Score=67.82  Aligned_cols=76  Identities=30%  Similarity=0.453  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c--c--cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H--A--LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~--~--~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++++++.+++..   .  .  .++.+   +.++      ..
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999998 7999999999999999999999999998888776521   1  1  12221   1110      13


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        85 ~~~d~li~~ag~~   97 (258)
T PRK06949         85 GTIDILVNNSGVS   97 (258)
T ss_pred             CCCCEEEECCCCC
Confidence            4589999999864

>PRK06194 hypothetical protein; Provisional

Probab=97.28  E-value=0.00073  Score=69.80  Aligned_cols=74  Identities=27%  Similarity=0.380  Sum_probs=54.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~  441 (616)
                      ++++++||+|+ ||+|++++..|.+.|++|++++|+.++.+++++++..   ..    .++.+   +.++      ....
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999998 7999999999999999999999998888777766531   11    12222   2111      1235


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        84 id~vi~~Ag~~   94 (287)
T PRK06194         84 VHLLFNNAGVG   94 (287)
T ss_pred             CCEEEECCCCC
Confidence            79999999874

>PRK09186 flagellin modification protein A; Provisional

Probab=97.27  E-value=0.00068  Score=68.54  Aligned_cols=46  Identities=33%  Similarity=0.444  Sum_probs=41.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++++++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   48 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESL   48 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHH
Confidence            35799999998 79999999999999999999999999988877665

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.25  E-value=0.00079  Score=68.93  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=53.5

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECC---HHHHHHHHHHHC-Ccc----cchhc---cccc------
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRT---YDRARELAETVG-GHA----LSLAD---LENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt---~~ka~~la~~~~-~~~----~~~~~---l~~~------  437 (616)
                      ++++|+++|+|+   +|+|+++++.|++.|++|++.+|+   .++.+++++++. ...    +|+.+   ++.+      
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            467899999997   599999999999999999998764   456677777653 221    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        84 ~~g~ld~lv~nag~~   98 (257)
T PRK08594         84 EVGVIHGVAHCIAFA   98 (257)
T ss_pred             hCCCccEEEECcccC
Confidence            235689999998753

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=97.24  E-value=0.0013  Score=62.92  Aligned_cols=91  Identities=26%  Similarity=0.263  Sum_probs=60.1

Q ss_pred             HHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 007151          355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  433 (616)
Q Consensus       355 ~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~  433 (616)
                      .|++..|+..           +.+++||+|+|+|.++ .|+.++..|.+.|+.|+++....+..++              
T Consensus        21 ~aii~lL~~~-----------~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~--------------   75 (160)
T PF02882_consen   21 LAIIELLEYY-----------GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE--------------   75 (160)
T ss_dssp             HHHHHHHHHT-----------T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH--------------
T ss_pred             HHHHHHHHhc-----------CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc--------------
Confidence            5677766542           2578999999999975 8999999999999999998775322111              


Q ss_pred             ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCc
Q 007151          434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  481 (616)
Q Consensus       434 l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~  481 (616)
                          ...++|+||.+++.   |+    .+..++++++.+|+|+-.++.
T Consensus        76 ----~~~~ADIVVsa~G~---~~----~i~~~~ik~gavVIDvG~~~~  112 (160)
T PF02882_consen   76 ----ITRRADIVVSAVGK---PN----LIKADWIKPGAVVIDVGINYV  112 (160)
T ss_dssp             ----HHTTSSEEEE-SSS---TT-----B-GGGS-TTEEEEE--CEEE
T ss_pred             ----eeeeccEEeeeecc---cc----ccccccccCCcEEEecCCccc
Confidence                12458999998874   22    366788999999999987654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN02928 oxidoreductase family protein

Probab=97.24  E-value=0.00055  Score=73.64  Aligned_cols=122  Identities=16%  Similarity=0.162  Sum_probs=77.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH--------HHHCCcccchhcccccCCCCccEEEEcC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA--------ETVGGHALSLADLENFNPEDGMILANTT  449 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la--------~~~~~~~~~~~~l~~~~~~~~divInat  449 (616)
                      .+.||++.|+|.|.+|+++|..|...|++|+.++|+..+.....        ..+........++.+ .+.++|+|++++
T Consensus       156 ~l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl~l  234 (347)
T PLN02928        156 TLFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVLCC  234 (347)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEECC
Confidence            57899999999999999999999999999999999743221110        000000012223333 345689999999


Q ss_pred             CCCCCCCCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          450 SIGMQPKVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       450 ~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      |..-  .+ ...+..+   .++++.+++++.-.+. ++.-|-+|-+.|...--|++++
T Consensus       235 Plt~--~T-~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g~i~gAaLDV~  289 (347)
T PLN02928        235 TLTK--ET-AGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESGHLGGLAIDVA  289 (347)
T ss_pred             CCCh--Hh-hcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEEccC
Confidence            9642  21 1224433   3467788888876544 4555566777776555566653

>PRK12742 oxidoreductase; Provisional

Probab=97.23  E-value=0.001  Score=66.45  Aligned_cols=74  Identities=28%  Similarity=0.364  Sum_probs=53.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHCCcc--cchhc---cccc--CCCCccEEEEcC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGGHA--LSLAD---LENF--NPEDGMILANTT  449 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~~~~--~~~~~---l~~~--~~~~~divInat  449 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++..| +.++.+++.++++...  .++.+   +.+.  .....|++||++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            56899999998 79999999999999999877654 6777777777665432  23222   1111  124589999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        84 g~~   86 (237)
T PRK12742         84 GIA   86 (237)
T ss_pred             CCC
Confidence            764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.22  E-value=0.00087  Score=68.66  Aligned_cols=75  Identities=24%  Similarity=0.285  Sum_probs=51.2

Q ss_pred             ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCcc---cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHA---LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~~---~~~~~---l~~~------~~  439 (616)
                      .+++|.++|+|++   |+|++++..|++.|++|++..|+.   +.+++++++.+...   +|+.+   +..+      ..
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999995   899999999999999999998874   23444444433221   23322   1110      24


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        85 g~iDilVnnag~~   97 (260)
T PRK06603         85 GSFDFLLHGMAFA   97 (260)
T ss_pred             CCccEEEEccccC
Confidence            5689999988753

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.22  E-value=0.00056  Score=72.68  Aligned_cols=45  Identities=27%  Similarity=0.564  Sum_probs=41.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      .|+.++|+|| ||+|+++|..|++.|++|++++|+.++.+++++++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI   97 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence            5899999998 79999999999999999999999999998887765

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.22  E-value=0.00057  Score=64.37  Aligned_cols=71  Identities=30%  Similarity=0.417  Sum_probs=52.4

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECC--HHHHHHHHHHHC---Ccc----cchhc---cccc------CCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVG---GHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt--~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~  441 (616)
                      |+++|+|+ ||+|++++++|.+.|. +|+++.|+  .++.+++.+++.   ...    .|+.+   +..+      ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999998 6999999999999988 89999999  888888877664   211    12211   1110      2346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            89999999874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.22  E-value=0.00076  Score=70.99  Aligned_cols=113  Identities=16%  Similarity=0.170  Sum_probs=73.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++.|+|.|-+|.+++..|.+.|.+|+++||+.++++++.+.......+.+++.+ .....|+|+-++|.+.....- ..+
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~-~~~~~dvIi~~vp~~~~~~v~-~~l   79 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQ-RLSAPRVVWVMVPHGIVDAVL-EEL   79 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHh-hcCCCCEEEEEcCchHHHHHH-HHH
Confidence            589999999999999999999999999999999999887642112223333322 234579999998865211000 001


Q ss_pred             ccccccCccEEEEEeeC-CcccHH-HHHHHHcCCeEEc
Q 007151          463 PKHALGHYALVFDAVYT-PKITRL-LREAEESGATIVS  498 (616)
Q Consensus       463 ~~~~l~~~~~v~Di~Y~-P~~T~l-l~~A~~~G~~~i~  498 (616)
                      . ..+.++.+++|..-. |..|.- .++.+++|+..++
T Consensus        80 ~-~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vd  116 (298)
T TIGR00872        80 A-PTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLD  116 (298)
T ss_pred             H-hhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEe
Confidence            1 135667899998654 344432 2344567776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=97.21  E-value=0.00086  Score=69.91  Aligned_cols=110  Identities=21%  Similarity=0.241  Sum_probs=75.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.+||-|-||..++..|.+.|++|+++||+++++.+.+...+.... +..+    .....|+||-+.+-+-  ......
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~e----aa~~aDvVitmv~~~~--~V~~V~   75 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAE----AAAEADVVITMLPDDA--AVRAVL   75 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHH----HHHhCCEEEEecCCHH--HHHHHH
Confidence            68899999999999999999999999999999998887777665432 2212    1245799998777431  111111


Q ss_pred             cccc----cccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEEc
Q 007151          462 IPKH----ALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  498 (616)
Q Consensus       462 i~~~----~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i~  498 (616)
                      +.++    .++++.+++|+....+ .+ .+-+.++++|+..++
T Consensus        76 ~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lD  118 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLD  118 (286)
T ss_pred             hCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEe
Confidence            2212    3457899999998643 33 334445567776553

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.20  E-value=0.00076  Score=71.25  Aligned_cols=45  Identities=24%  Similarity=0.298  Sum_probs=38.7

Q ss_pred             cccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          377 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       377 ~~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      .+++||.++|+|+   .|+|+++|.+|++.|++|++ .|+.++.++++.
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~   52 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFET   52 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHH
Confidence            5689999999999   79999999999999999988 677666666553

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0012  Score=68.02  Aligned_cols=72  Identities=28%  Similarity=0.347  Sum_probs=53.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhccc---cc------CCCCccEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLE---NF------NPEDGMILA  446 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l~---~~------~~~~~divI  446 (616)
                      +|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+..+...    .++.+.+   ..      .....|+||
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            578999998 799999999999999999999999998888766543221    2322211   10      124589999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        84 ~~ag~~   89 (277)
T PRK06180         84 NNAGYG   89 (277)
T ss_pred             ECCCcc
Confidence            999865

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.00087  Score=67.85  Aligned_cols=73  Identities=34%  Similarity=0.420  Sum_probs=54.2

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc----ccchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH----ALSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~----~~~~~~---l~~~------~~~~  441 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ..    ..++.+   +..+      ....
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999998 799999999999999999999999988888876653   11    122221   1110      2346


Q ss_pred             ccEEEEcCCC
Q 007151          442 GMILANTTSI  451 (616)
Q Consensus       442 ~divInat~~  451 (616)
                      .|++||+++.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999999864

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0011  Score=66.78  Aligned_cols=75  Identities=27%  Similarity=0.357  Sum_probs=54.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c----ccchhcccc---c------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLADLEN---F------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~----~~~~~~l~~---~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+.+++..   .    ..++.+..+   +      ...
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            357899999998 8999999999999999999999998877777665421   1    122222111   0      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        83 ~id~vi~~ag~~   94 (250)
T PRK07774         83 GIDYLVNNAAIY   94 (250)
T ss_pred             CCCEEEECCCCc
Confidence            589999999864

>PRK13243 glyoxylate reductase; Reviewed

Probab=97.20  E-value=0.00089  Score=71.66  Aligned_cols=118  Identities=22%  Similarity=0.278  Sum_probs=76.5

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|.+++|+.....  ....+....+++++    ..++|+|+.++|..-.  
T Consensus       146 ~~L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~~~~~~l~el----l~~aDiV~l~lP~t~~--  217 (333)
T PRK13243        146 YDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA--EKELGAEYRPLEEL----LRESDFVSLHVPLTKE--  217 (333)
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcCCEecCHHHH----HhhCCEEEEeCCCChH--
Confidence            367899999999999999999999999999999999865432  22333322233332    3458999999986421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      + ...+..+   .++++.+++++.-.+. ++.-+.+|.+.|-..--+++++
T Consensus       218 T-~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~  267 (333)
T PRK13243        218 T-YHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVF  267 (333)
T ss_pred             H-hhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccC
Confidence            1 1123322   3456677777776544 4555556666665444555544

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.18  E-value=0.0013  Score=65.80  Aligned_cols=75  Identities=31%  Similarity=0.447  Sum_probs=56.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++++++|+|+ |++|++++..|.+.|+.|++.+|+.++.+++...++...    .++.+   +.++      .....|
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            356899999997 799999999999999999999999999888877654321    22221   1110      134689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12936         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999998864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.18  E-value=0.00093  Score=68.20  Aligned_cols=75  Identities=21%  Similarity=0.396  Sum_probs=52.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC----Ccc----cchhc---cccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG----GHA----LSLAD---LENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~----~~~----~~~~~---l~~~------  437 (616)
                      .++++|+++|+|+ +|+|++++..|++.|++|+++. |+.++++++++++.    .+.    +|+.+   +.++      
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999998 6999999999999999988875 56777776665542    111    23222   1110      


Q ss_pred             CCCCccEEEEcCCC
Q 007151          438 NPEDGMILANTTSI  451 (616)
Q Consensus       438 ~~~~~divInat~~  451 (616)
                      .....|++||+++.
T Consensus        84 ~~g~id~lv~nAg~   97 (260)
T PRK08416         84 DFDRVDFFISNAII   97 (260)
T ss_pred             hcCCccEEEECccc
Confidence            23568999999865

>PRK06484 short chain dehydrogenase; Validated

Probab=97.18  E-value=0.001  Score=75.01  Aligned_cols=75  Identities=28%  Similarity=0.419  Sum_probs=57.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ...+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++++++++...    .++.+   +..+      ..+..|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999998 699999999999999999999999999999888775432    23322   1111      235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus       346 ~li~nAg~~  354 (520)
T PRK06484        346 VLVNNAGIA  354 (520)
T ss_pred             EEEECCCCc
Confidence            999999753

>PRK06182 short chain dehydrogenase; Validated

Probab=97.18  E-value=0.00085  Score=68.91  Aligned_cols=73  Identities=33%  Similarity=0.403  Sum_probs=52.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~divIn  447 (616)
                      ++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++... +...  .|+.+   +...      .....|++||
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL-GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4689999998 7999999999999999999999999887776542 2211  23222   1110      2346899999


Q ss_pred             cCCCCC
Q 007151          448 TTSIGM  453 (616)
Q Consensus       448 at~~gm  453 (616)
                      +++.+.
T Consensus        81 ~ag~~~   86 (273)
T PRK06182         81 NAGYGS   86 (273)
T ss_pred             CCCcCC
Confidence            998653

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0011  Score=67.79  Aligned_cols=75  Identities=32%  Similarity=0.315  Sum_probs=55.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc--c--cchhccccc---------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH--A--LSLADLENF---------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~--~--~~~~~l~~~---------~~~  440 (616)
                      ++++++++|+|+ ||+|++++..|.+.|++|+++.|+.++.+++.+.+.   ..  .  .++.+..+.         ...
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            567899999998 689999999999999999999999988888876652   11  1  222221110         124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        87 ~id~vi~~Ag~~   98 (263)
T PRK07814         87 RLDIVVNNVGGT   98 (263)
T ss_pred             CCCEEEECCCCC
Confidence            689999998764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.17  E-value=0.00071  Score=69.34  Aligned_cols=74  Identities=16%  Similarity=0.268  Sum_probs=50.1

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc---ccchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH---ALSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~---~~~~~~---l~~~------~~~  440 (616)
                      +++|.++|+|+   +|+|+++|..|++.|++|++..|+.   ++++++.++.+..   .+|+.+   ++++      ...
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57899999994   5999999999999999999987653   3344444433321   123222   1111      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++.+
T Consensus        84 ~iD~lVnnAG~~   95 (261)
T PRK08690         84 GLDGLVHSIGFA   95 (261)
T ss_pred             CCcEEEECCccC
Confidence            689999999875

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.17  E-value=0.002  Score=72.51  Aligned_cols=96  Identities=23%  Similarity=0.290  Sum_probs=64.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      +.+++|+|+|.|+.|++++..|...|++|+++++..++.+.+ ++.+.....-....+ .+..+|+||.+.++       
T Consensus        10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~-~l~~~D~VV~SpGi-------   80 (488)
T PRK03369         10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQ-QIADYALVVTSPGF-------   80 (488)
T ss_pred             cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHh-HhhcCCEEEECCCC-------
Confidence            467899999999999999999999999999999876654432 333322211000001 12235666654332       


Q ss_pred             CCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHH
Q 007151          459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       459 ~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                                           |...|.+++|+++|++++.-++++.
T Consensus        81 ---------------------~~~~p~~~~a~~~gi~v~~~iel~~  105 (488)
T PRK03369         81 ---------------------RPTAPVLAAAAAAGVPIWGDVELAW  105 (488)
T ss_pred             ---------------------CCCCHHHHHHHHCCCcEeeHHHHhh
Confidence                                 2345678889999999998888753

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.00062  Score=69.52  Aligned_cols=75  Identities=25%  Similarity=0.266  Sum_probs=50.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~---~l~~~~~~~~divInat~  450 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.....+.........  .++.   ++.+ ..+..|++||+++
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~iDilVnnAG   88 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDK-QLASLDVLILNHG   88 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHH-hcCCCCEEEECCc
Confidence            3567899999998 699999999999999999999998632221111111111  2322   2222 3456899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      .+
T Consensus        89 ~~   90 (245)
T PRK12367         89 IN   90 (245)
T ss_pred             cC
Confidence            64

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.17  E-value=0.00097  Score=69.47  Aligned_cols=72  Identities=29%  Similarity=0.396  Sum_probs=54.7

Q ss_pred             CcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--------cchh-------cccc-cCCCCcc
Q 007151          381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--------LSLA-------DLEN-FNPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--------~~~~-------~l~~-~~~~~~d  443 (616)
                      |+=++|+||+ |+||+.|..|+++|.+|++++||.+|.+++++++....        +|+.       .+.+ +..-+.-
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            4679999995 99999999999999999999999999999998875321        2332       1222 1122456


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus       129 ILVNNvG~~  137 (312)
T KOG1014|consen  129 ILVNNVGMS  137 (312)
T ss_pred             EEEeccccc
Confidence            899998865

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0011  Score=66.96  Aligned_cols=75  Identities=27%  Similarity=0.431  Sum_probs=55.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++.+++..   ..    +++.+   +..+      ..
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3577899999998 6999999999999999999999999888888776521   11    12221   1110      13


Q ss_pred             CCccEEEEcCCC
Q 007151          440 EDGMILANTTSI  451 (616)
Q Consensus       440 ~~~divInat~~  451 (616)
                      ...|++||+++.
T Consensus        84 ~~id~li~~ag~   95 (252)
T PRK07035         84 GRLDILVNNAAA   95 (252)
T ss_pred             CCCCEEEECCCc
Confidence            458999999875

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.00093  Score=70.47  Aligned_cols=74  Identities=31%  Similarity=0.386  Sum_probs=51.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH----------HHHHHHHHHHC---Ccc----cchhc---ccc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----------DRARELAETVG---GHA----LSLAD---LEN  436 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~----------~ka~~la~~~~---~~~----~~~~~---l~~  436 (616)
                      .+++|+++|+|+ +|+|++++.+|++.|++|++++|+.          ++.+++++.+.   ...    .|+.+   +..
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            478999999998 5999999999999999999999973          45555555442   211    22221   111


Q ss_pred             c------CCCCccEEEEcC-CC
Q 007151          437 F------NPEDGMILANTT-SI  451 (616)
Q Consensus       437 ~------~~~~~divInat-~~  451 (616)
                      +      ..+..|++||++ +.
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHHcCCccEEEECCccc
Confidence            1      235689999998 53

>PRK06046 alanine dehydrogenase; Validated

Probab=97.16  E-value=0.0017  Score=69.36  Aligned_cols=113  Identities=19%  Similarity=0.208  Sum_probs=73.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      -+++.|+|+|+.|+..+.++.. .+. +|+|++|+.++++++++++...    ....+++++ ... +|+|++|||.. .
T Consensus       129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~-aDiVv~aTps~-~  205 (326)
T PRK06046        129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEE-ACD-CDILVTTTPSR-K  205 (326)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHH-Hhh-CCEEEEecCCC-C
Confidence            4789999999999999999875 466 8999999999999999887421    111233333 233 89999999963 2


Q ss_pred             CCCCCCccccccccCccEEEEE-eeCCcccHHHHHHHHcCCeEEccHH
Q 007151          455 PKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di-~Y~P~~T~ll~~A~~~G~~~i~Gl~  501 (616)
                      |.     +..++++++..|.-+ .|.|....+-.+.-++.-.+++-.+
T Consensus       206 P~-----~~~~~l~~g~hV~~iGs~~p~~~El~~~~~~~a~vvvD~~~  248 (326)
T PRK06046        206 PV-----VKAEWIKEGTHINAIGADAPGKQELDPEILLRAKVVVDDME  248 (326)
T ss_pred             cE-----ecHHHcCCCCEEEecCCCCCccccCCHHHHhCCcEEECCHH
Confidence            32     445677777665545 2445432222222223334566654

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0012  Score=68.84  Aligned_cols=74  Identities=34%  Similarity=0.478  Sum_probs=53.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH---------HHHHHHHHHHC---Ccc----cchhc---cccc-
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY---------DRARELAETVG---GHA----LSLAD---LENF-  437 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~---------~ka~~la~~~~---~~~----~~~~~---l~~~-  437 (616)
                      +++|+++|+|+ +|+|++++..|++.|++|++++|+.         ++++++++++.   ...    +|+.+   +.++ 
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            56899999998 6999999999999999999988865         66777766652   111    23222   1110 


Q ss_pred             -----CCCCccEEEEcCCCC
Q 007151          438 -----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -----~~~~~divInat~~g  452 (616)
                           .....|++||+++..
T Consensus        84 ~~~~~~~g~id~lv~nAG~~  103 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGIL  103 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence                 235689999999864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.16  E-value=0.0011  Score=67.50  Aligned_cols=70  Identities=26%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---cccc------CCCCccEEE
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~--~--~~~~~---l~~~------~~~~~divI  446 (616)
                      +++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+++..  .  .  .|+.+   +.++      .....|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899998 6999999999999999999999999888887766532  1  1  23222   1111      235689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        82 ~naG~~   87 (259)
T PRK08340         82 WNAGNV   87 (259)
T ss_pred             ECCCCC
Confidence            999853

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.16  E-value=0.0015  Score=66.72  Aligned_cols=76  Identities=24%  Similarity=0.211  Sum_probs=56.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+.   .+.    .++.+.   .++      ..
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4678899999998 699999999999999999999999988887776652   121    222211   110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++|++++..
T Consensus        86 ~~id~li~~ag~~   98 (265)
T PRK07097         86 GVIDILVNNAGII   98 (265)
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999864

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0011  Score=66.97  Aligned_cols=75  Identities=25%  Similarity=0.363  Sum_probs=54.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.   ...    .++.+   +.++      ...
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999998 799999999999999999999999988777665542   111    22221   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        84 ~id~li~~ag~~   95 (253)
T PRK06172         84 RLDYAFNNAGIE   95 (253)
T ss_pred             CCCEEEECCCCC
Confidence            579999998753

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.15  E-value=0.003  Score=70.76  Aligned_cols=98  Identities=26%  Similarity=0.287  Sum_probs=60.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccch--hcccccCCCCccEEEEcCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSL--ADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~~~~--~~l~~~~~~~~divInat~~gm  453 (616)
                      .++++++|+|+|+|++|.++|..|.+.|++|+++++.. +....+.+.+...-+.+  ..... ....+|+||-+++   
T Consensus        12 ~~~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~G---   87 (480)
T PRK01438         12 SDWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPG---   87 (480)
T ss_pred             cCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCC---
Confidence            45778999999999999999999999999999998653 33333333321110000  00000 0112344443222   


Q ss_pred             CCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHH
Q 007151          454 QPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                                               .|..+++++.|+++|++++...+.+
T Consensus        88 -------------------------i~~~~~~~~~a~~~gi~v~~~~e~~  112 (480)
T PRK01438         88 -------------------------WRPDAPLLAAAADAGIPVWGEVELA  112 (480)
T ss_pred             -------------------------cCCCCHHHHHHHHCCCeecchHHHH
Confidence                                     1235778888889999998888854

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.15  E-value=0.0014  Score=66.03  Aligned_cols=75  Identities=31%  Similarity=0.425  Sum_probs=50.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++|+.. +..+..+..+...    .++.+   +..+      .....
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            367899999998 79999999999999999999999752 2222222333211    22221   1110      23468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        82 d~li~~ag~~   91 (248)
T TIGR01832        82 DILVNNAGII   91 (248)
T ss_pred             CEEEECCCCC
Confidence            9999999864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0011  Score=66.74  Aligned_cols=74  Identities=34%  Similarity=0.485  Sum_probs=54.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Ccc----cchhc---cccc------CCCCc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~--~~~----~~~~~---l~~~------~~~~~  442 (616)
                      +++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.++..+.+.  ...    .++.+   +.+.      .....
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999998 799999999999999999999999888877776652  111    22221   1110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        83 d~vi~~ag~~   92 (252)
T PRK06138         83 DVLVNNAGFG   92 (252)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.13  E-value=0.0015  Score=71.60  Aligned_cols=70  Identities=30%  Similarity=0.397  Sum_probs=55.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+.|++|+|+|+|.+|+.++..+...|++|+++++++.|++ .|..++....+.++    ....+|++|.||+.
T Consensus       198 ~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-~A~~~G~~~~~~~e----~v~~aDVVI~atG~  267 (413)
T cd00401         198 VMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICAL-QAAMEGYEVMTMEE----AVKEGDIFVTTTGN  267 (413)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHH-HHHhcCCEEccHHH----HHcCCCEEEECCCC
Confidence            457899999999999999999999999999999999988865 45556654444332    22457999998863

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.13  E-value=0.00092  Score=75.81  Aligned_cols=74  Identities=20%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--------------cc--cchhccccc--CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------------HA--LSLADLENF--NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--------------~~--~~~~~l~~~--~~  439 (616)
                      .+||+++|+|| |++|++++..|++.|++|+++.|+.++++.+++.+..              ..  .++.+.+++  .+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46789999998 8999999999999999999999999998887654311              01  233222211  35


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      .+.|+|||+++..
T Consensus       158 ggiDiVVn~AG~~  170 (576)
T PLN03209        158 GNASVVICCIGAS  170 (576)
T ss_pred             cCCCEEEEccccc
Confidence            6789999998753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.12  E-value=0.00095  Score=68.30  Aligned_cols=74  Identities=24%  Similarity=0.204  Sum_probs=48.7

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECC------HHHHHHHHHHHCC-cc--cchhcc---ccc------
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRT------YDRARELAETVGG-HA--LSLADL---ENF------  437 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt------~~ka~~la~~~~~-~~--~~~~~l---~~~------  437 (616)
                      +++|+++|+|+   +|+|+++++.|++.|++|++..|+      .+.++++.+..+. ..  +|+.+.   .++      
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            56899999997   499999999999999999887653      2333344333221 11  233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        84 ~~g~iD~lv~nag~~   98 (258)
T PRK07370         84 KWGKLDILVHCLAFA   98 (258)
T ss_pred             HcCCCCEEEEccccc
Confidence            235689999999864

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.001  Score=67.72  Aligned_cols=72  Identities=21%  Similarity=0.232  Sum_probs=53.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--c----cchhc---cccc------CCCCccE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--A----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~--~----~~~~~---l~~~------~~~~~di  444 (616)
                      +++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...  .    +|+.+   +.++      .....|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            468999997 79999999999999999999999999888877765321  1    22221   1110      2345799


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        82 lv~~ag~~   89 (257)
T PRK07024         82 VIANAGIS   89 (257)
T ss_pred             EEECCCcC
Confidence            99999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.12  E-value=0.0015  Score=66.18  Aligned_cols=76  Identities=25%  Similarity=0.338  Sum_probs=56.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ..+++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++++++.   ...    .++.+   +..+      ..
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4578999999998 699999999999999999999999988887776552   111    22222   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++|++++..
T Consensus        87 ~~id~vi~~ag~~   99 (256)
T PRK06124         87 GRLDILVNNVGAR   99 (256)
T ss_pred             CCCCEEEECCCCC
Confidence            4679999998753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.11  E-value=0.0015  Score=68.97  Aligned_cols=72  Identities=25%  Similarity=0.320  Sum_probs=54.2

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~~~  442 (616)
                      +|+++|+|+ +|+|++++..|++.| ++|++++|+.+++++++++++.   ..    +++.+.   ..+      .....
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            689999998 699999999999999 7999999999998888877642   11    233221   110      13468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        83 D~lI~nAG~~   92 (314)
T TIGR01289        83 DALVCNAAVY   92 (314)
T ss_pred             CEEEECCCcc
Confidence            9999999863

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0016  Score=65.58  Aligned_cols=73  Identities=23%  Similarity=0.313  Sum_probs=53.6

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhccc---cc------CCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADLE---NF------NPED  441 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~l~---~~------~~~~  441 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+++..     ..    .|+.+.+   +.      ....
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999997 7999999999999999999999999988887655421     11    2222211   10      2346


Q ss_pred             ccEEEEcCCCCC
Q 007151          442 GMILANTTSIGM  453 (616)
Q Consensus       442 ~divInat~~gm  453 (616)
                      .|++||+++.+.
T Consensus        82 id~vi~~ag~~~   93 (248)
T PRK08251         82 LDRVIVNAGIGK   93 (248)
T ss_pred             CCEEEECCCcCC
Confidence            899999998753

>PRK08328 hypothetical protein; Provisional

Probab=97.10  E-value=0.00052  Score=69.67  Aligned_cols=114  Identities=25%  Similarity=0.320  Sum_probs=73.3

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccch----------hcccccCCCCccEEEE
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL----------ADLENFNPEDGMILAN  447 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~----------~~l~~~~~~~~divIn  447 (616)
                      +++++|+|+|+||.|..++..|+..|+ ++++++.+.-....+-.++-...-++          +.+..   -+.++.|+
T Consensus        25 L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~---~np~v~v~  101 (231)
T PRK08328         25 LKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER---FNSDIKIE  101 (231)
T ss_pred             HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH---hCCCCEEE
Confidence            567899999999999999999999999 99999987655544433321100000          01111   13467777


Q ss_pred             cCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHH--HHHcCCeEEccHH
Q 007151          448 TTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE--AEESGATIVSGLE  501 (616)
Q Consensus       448 at~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~--A~~~G~~~i~Gl~  501 (616)
                      +.. ++..   +..+ .+.+++..+|+|..+++ .|+++-.  |++.|++.+.|.-
T Consensus       102 ~~~-~~~~---~~~~-~~~l~~~D~Vid~~d~~-~~r~~l~~~~~~~~ip~i~g~~  151 (231)
T PRK08328        102 TFV-GRLS---EENI-DEVLKGVDVIVDCLDNF-ETRYLLDDYAHKKGIPLVHGAV  151 (231)
T ss_pred             EEe-ccCC---HHHH-HHHHhcCCEEEECCCCH-HHHHHHHHHHHHcCCCEEEEee
Confidence            643 2211   1111 23466778999999986 4665554  7889998876543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=97.10  E-value=0.00089  Score=73.48  Aligned_cols=74  Identities=27%  Similarity=0.273  Sum_probs=52.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc--cchhc---ccccCCCCccEEEEcC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA--LSLAD---LENFNPEDGMILANTT  449 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~--~~~~~---l~~~~~~~~divInat  449 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++.......  ..  .++.+   +.+ ..++.|++||++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInnA  253 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-LLEKVDILIINH  253 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-HhCCCCEEEECC
Confidence            456899999998 7999999999999999999999988766543322111  11  22222   222 245689999998


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +.+
T Consensus       254 Gi~  256 (406)
T PRK07424        254 GIN  256 (406)
T ss_pred             CcC
Confidence            865

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.09  E-value=0.0018  Score=65.68  Aligned_cols=75  Identities=31%  Similarity=0.375  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~  440 (616)
                      ++++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+++..   ..    .++.+..   ++      ...
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456899999998 8999999999999999999999999888877766532   11    2322211   10      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+||++++..
T Consensus        84 ~~d~vi~~ag~~   95 (262)
T PRK13394         84 SVDILVSNAGIQ   95 (262)
T ss_pred             CCCEEEECCccC
Confidence            579999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=97.09  E-value=0.0012  Score=74.32  Aligned_cols=72  Identities=29%  Similarity=0.459  Sum_probs=55.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCccEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMIL  445 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~div  445 (616)
                      ++|+++|+|+ +|+|++++..|++.|++|++++|+.++.++++++++...    +|+.+.   ..+      .....|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5799999998 599999999999999999999999999998888775432    232221   110      23568999


Q ss_pred             EEcCCC
Q 007151          446 ANTTSI  451 (616)
Q Consensus       446 Inat~~  451 (616)
                      ||+++.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999875

>PRK08643 acetoin reductase; Validated

Probab=97.09  E-value=0.0014  Score=66.39  Aligned_cols=72  Identities=24%  Similarity=0.281  Sum_probs=53.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~~~d  443 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.++++.++..   ..    .++.+.   .+.      .....|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999998 7999999999999999999999999888887766532   11    232221   110      234689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 ~vi~~ag~~   90 (256)
T PRK08643         82 VVVNNAGVA   90 (256)
T ss_pred             EEEECCCCC
Confidence            999999753

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0017  Score=67.08  Aligned_cols=72  Identities=22%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcc---ccc-------CCCCccEEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADL---ENF-------NPEDGMILAN  447 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l---~~~-------~~~~~divIn  447 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+. +...  .|+.+.   ..+       ..+..|++||
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            578999998 8999999999999999999999999888777542 2211  233221   110       1245799999


Q ss_pred             cCCCCC
Q 007151          448 TTSIGM  453 (616)
Q Consensus       448 at~~gm  453 (616)
                      +++.+.
T Consensus        83 ~Ag~~~   88 (277)
T PRK05993         83 NGAYGQ   88 (277)
T ss_pred             CCCcCC
Confidence            988664

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=97.08  E-value=0.0015  Score=68.75  Aligned_cols=111  Identities=24%  Similarity=0.187  Sum_probs=73.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.|+|.|-||.+++..|.+.|.+|+++||++++.+++.+ .+.... +.+++.+ .....|+|+-+.|.+..  .... 
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~~~~e~~~-~~~~~dvvi~~v~~~~~--~~~v-   76 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAE-EGATGADSLEELVA-KLPAPRVVWLMVPAGEI--TDAT-   76 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCeecCCHHHHHh-hcCCCCEEEEEecCCcH--HHHH-
Confidence            5899999999999999999999999999999999988865 343322 3333322 12236899888875411  0000 


Q ss_pred             cc--cccccCccEEEEEee-CCcccH-HHHHHHHcCCeEEc
Q 007151          462 IP--KHALGHYALVFDAVY-TPKITR-LLREAEESGATIVS  498 (616)
Q Consensus       462 i~--~~~l~~~~~v~Di~Y-~P~~T~-ll~~A~~~G~~~i~  498 (616)
                      +.  ...+.++.+++|+.- .|..|. +.+.++++|+..++
T Consensus        77 ~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~d  117 (301)
T PRK09599         77 IDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVD  117 (301)
T ss_pred             HHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEe
Confidence            11  123566789999965 344443 45666778887664

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.08  E-value=0.00087  Score=66.60  Aligned_cols=36  Identities=31%  Similarity=0.487  Sum_probs=33.4

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++++
T Consensus        18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            3567899999999999999999999999 99999987

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.08  E-value=0.0011  Score=67.92  Aligned_cols=74  Identities=22%  Similarity=0.296  Sum_probs=51.6

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHHHCCc-c--cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGH-A--LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nR---t~~ka~~la~~~~~~-~--~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+   +|+|++++..|++.|++|++..|   +.++.+++.++++.. .  +|+.+   +..+      ...
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            56899999994   59999999999999999988765   356666666655421 1  23222   1111      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        84 ~iD~lvnnAG~~   95 (260)
T PRK06997         84 GLDGLVHSIGFA   95 (260)
T ss_pred             CCcEEEEccccC
Confidence            689999999864

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.08  E-value=0.0011  Score=63.23  Aligned_cols=73  Identities=23%  Similarity=0.280  Sum_probs=50.3

Q ss_pred             cccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       375 ~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ...+++|++|+|+|+|.+|...+..|.+.|++|+|++.+  ..+++.+ ++.....-..+.+..+.++|+||.+|.
T Consensus         7 ~~l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~-l~~i~~~~~~~~~~dl~~a~lViaaT~   79 (157)
T PRK06719          7 LMFNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPE--ICKEMKE-LPYITWKQKTFSNDDIKDAHLIYAATN   79 (157)
T ss_pred             eEEEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHh-ccCcEEEecccChhcCCCceEEEECCC
Confidence            346899999999999999999999999999999999654  3334433 221111111222213566899998886

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0016  Score=67.33  Aligned_cols=71  Identities=24%  Similarity=0.346  Sum_probs=51.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc-----CCCCccEE
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF-----NPEDGMIL  445 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~-----~~~~~div  445 (616)
                      +|.++|+|+||+|++++..|. .|++|++++|+.++++++.+++.   .+.    +|+.+.   ..+     .....|++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            478999999999999999996 79999999999888877766553   111    232221   110     12468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        81 i~nAG~~   87 (275)
T PRK06940         81 VHTAGVS   87 (275)
T ss_pred             EECCCcC
Confidence            9999864

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0014  Score=66.51  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=52.6

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ||+++|+|+ ||+|++++..|.+.|++|++++|+.++++++++++..   ..    .|+.+   +..+      .....|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            478999998 6999999999999999999999999888887766531   11    12221   1110      134689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        81 ~lI~~ag~~   89 (252)
T PRK07677         81 ALINNAAGN   89 (252)
T ss_pred             EEEECCCCC
Confidence            999998753

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0018  Score=66.12  Aligned_cols=74  Identities=27%  Similarity=0.359  Sum_probs=54.3

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhccc---cc-----CCCCcc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLADLE---NF-----NPEDGM  443 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~--~--~~~~~l~---~~-----~~~~~d  443 (616)
                      +++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++..++..  .  .  .++.+.+   ++     .....|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46789999997 7999999999999999999999999988888766421  1  1  2222211   10     124579


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++|++++..
T Consensus        83 ~lv~~ag~~   91 (263)
T PRK09072         83 VLINNAGVN   91 (263)
T ss_pred             EEEECCCCC
Confidence            999998754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.04  E-value=0.0015  Score=66.42  Aligned_cols=74  Identities=24%  Similarity=0.329  Sum_probs=51.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~l---~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|+++.|+ ++.+++.+.+   +...    .++.+.   ..+      ..+
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999998 699999999999999999999998 4555554433   2211    222221   110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        91 ~id~li~~ag~~  102 (258)
T PRK06935         91 KIDILVNNAGTI  102 (258)
T ss_pred             CCCEEEECCCCC
Confidence            689999998864

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.002  Score=66.03  Aligned_cols=75  Identities=21%  Similarity=0.282  Sum_probs=54.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c----ccchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H----ALSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~----~~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..   .    .+|+.+   +..+      ...
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999998 7999999999999999999999998887776655431   1    122221   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        86 ~iD~vi~~ag~~   97 (264)
T PRK07576         86 PIDVLVSGAAGN   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            579999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.03  E-value=0.0022  Score=65.22  Aligned_cols=75  Identities=29%  Similarity=0.332  Sum_probs=55.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc----ccchhccccc---------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH----ALSLADLENF---------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~----~~~~~~l~~~---------~~~  440 (616)
                      ++++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+.+.   ..    ..++.+.+++         ...
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            467899999997 899999999999999999999999988777765543   11    1233221110         124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++|++++..
T Consensus        89 ~id~vi~~ag~~  100 (259)
T PRK08213         89 HVDILVNNAGAT  100 (259)
T ss_pred             CCCEEEECCCCC
Confidence            579999998754

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.02  E-value=0.0016  Score=68.03  Aligned_cols=111  Identities=15%  Similarity=0.183  Sum_probs=73.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++.|||.|-+|.+++..|++.|.+|++++|+.++++.+.+. +...  ..+..+ ...++|+||.+.|...  .....-+
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~--~~~~~~-~~~~aDivi~~vp~~~--~~~~v~~   74 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GAVT--AETARQ-VTEQADVIFTMVPDSP--QVEEVAF   74 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCcc--cCCHHH-HHhcCCEEEEecCCHH--HHHHHHc
Confidence            37899999999999999999999999999999998887643 2211  111212 2345899999988531  1110101


Q ss_pred             cc----ccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEcc
Q 007151          463 PK----HALGHYALVFDAVYTPKIT--RLLREAEESGATIVSG  499 (616)
Q Consensus       463 ~~----~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~G  499 (616)
                      ..    ..+.++.+++|....+..+  .+.+..+++|..+++.
T Consensus        75 ~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~  117 (291)
T TIGR01505        75 GENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDA  117 (291)
T ss_pred             CcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEec
Confidence            11    1245668889987755432  4556666778887764

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.02  E-value=0.004  Score=58.34  Aligned_cols=79  Identities=19%  Similarity=0.184  Sum_probs=61.4

Q ss_pred             cccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      .+++||+++|+|.+ -.|+.++..|.+.|++|++++++....++                  ...++|+||.+|+..  +
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~------------------~v~~ADIVvsAtg~~--~   83 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS------------------KVHDADVVVVGSPKP--E   83 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH------------------HHhhCCEEEEecCCC--C
Confidence            58999999999986 68999999999999999999864321111                  234589999999853  2


Q ss_pred             CCCCCccccccccCccEEEEEeeCC
Q 007151          456 KVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                           .+..++++++.+++|+-.+.
T Consensus        84 -----~i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          84 -----KVPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -----ccCHHHcCCCCEEEEcCCCc
Confidence                 26678999999999886543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK00625 shikimate kinase; Provisional

Probab=97.01  E-value=0.00024  Score=68.88  Aligned_cols=28  Identities=18%  Similarity=0.115  Sum_probs=26.2

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      |++|+||||+||||+|+.||+.++.+++
T Consensus         2 ~I~LiG~pGsGKTT~~k~La~~l~~~~i   29 (173)
T PRK00625          2 QIFLCGLPTVGKTSFGKALAKFLSLPFF   29 (173)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHhCCCEE
Confidence            6899999999999999999999998874

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0023  Score=64.26  Aligned_cols=75  Identities=36%  Similarity=0.381  Sum_probs=55.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++.+.+++..   ..    .++.+.   ..+      ...
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            356899999998 7999999999999999999999999988887766521   11    222221   110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        84 ~id~vi~~ag~~   95 (250)
T PRK12939         84 GLDGLVNNAGIT   95 (250)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0021  Score=65.35  Aligned_cols=71  Identities=28%  Similarity=0.272  Sum_probs=53.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c----ccchhc---cccc------C-CCCccEE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----ALSLAD---LENF------N-PEDGMIL  445 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~----~~~~~~---l~~~------~-~~~~div  445 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++. .    .+|+.+   +.++      . ....|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            68999998 7999999999999999999999999999888776642 1    123322   1110      1 3467999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        82 i~~ag~~   88 (260)
T PRK08267         82 FNNAGIL   88 (260)
T ss_pred             EECCCCC
Confidence            9999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0019  Score=64.60  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=52.0

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc---CCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF---NPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~---~~~~~divInat~~g  452 (616)
                      +++|+|+ ||+|++++..|.+.|++|++++|+.++.++++++++...  .++.+   +.++   .....|++||+++.+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            5899998 799999999999999999999999999888877764332  23222   2111   112579999998753

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0022  Score=64.33  Aligned_cols=73  Identities=23%  Similarity=0.260  Sum_probs=53.5

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCCCc
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDG  442 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~~~  442 (616)
                      ++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+.+..   ..    .++.+.+   ..      .....
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3589999997 8999999999999999999999999888877665421   11    2322211   10      12458


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        85 d~lv~~ag~~   94 (241)
T PRK07454         85 DVLINNAGMA   94 (241)
T ss_pred             CEEEECCCcc
Confidence            9999998764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.99  E-value=0.0031  Score=63.58  Aligned_cols=74  Identities=35%  Similarity=0.434  Sum_probs=54.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc---cc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~---~~------~~~~  441 (616)
                      +++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++..++.   ...    .++.+.+   .+      ....
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999997 899999999999999999999999998888776652   111    2222111   10      2246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+||++++..
T Consensus        82 ~d~vi~~a~~~   92 (258)
T PRK12429         82 VDILVNNAGIQ   92 (258)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0024  Score=63.71  Aligned_cols=74  Identities=24%  Similarity=0.347  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---cccc------CCCCc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENF------NPEDG  442 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~--~--~~~~~---l~~~------~~~~~  442 (616)
                      +.+++++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+.+..  .  .  .++.+   +.+.      .....
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999998 7899999999999999999999999988888776642  1  1  12221   1110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++.+
T Consensus        84 d~vi~~ag~~   93 (237)
T PRK07326         84 DVLIANAGVG   93 (237)
T ss_pred             CEEEECCCCC
Confidence            9999998765

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0025  Score=64.42  Aligned_cols=74  Identities=36%  Similarity=0.460  Sum_probs=51.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--c--cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--A--LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~--~--~~~~~---l~~~------~~~~~  442 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+.. +++.++.. .  .  .++.+   +..+      .....
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            567899999998 7999999999999999999999987653 33333321 1  1  22221   1110      12457


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++|++++..
T Consensus        91 d~vi~~ag~~  100 (255)
T PRK06841         91 DILVNSAGVA  100 (255)
T ss_pred             CEEEECCCCC
Confidence            9999999865

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0023  Score=65.04  Aligned_cols=75  Identities=27%  Similarity=0.350  Sum_probs=52.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.+ ..+++++++.   ...    .++.+   +.++      ..
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999998 69999999999999999999998753 4455555442   111    12211   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        85 g~id~li~~ag~~   97 (254)
T PRK06114         85 GALTLAVNAAGIA   97 (254)
T ss_pred             CCCCEEEECCCCC
Confidence            5679999999864

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0019  Score=65.50  Aligned_cols=75  Identities=27%  Similarity=0.315  Sum_probs=53.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++. ++.+++   +...    .++.+   +...      ..
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999999998 7999999999999999999999988765 444443   2111    22221   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        82 ~~id~vi~~ag~~   94 (258)
T PRK08628         82 GRIDGLVNNAGVN   94 (258)
T ss_pred             CCCCEEEECCccc
Confidence            4689999999853

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.96  E-value=0.0025  Score=64.51  Aligned_cols=71  Identities=23%  Similarity=0.439  Sum_probs=52.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccEEEE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divIn  447 (616)
                      ++++|+|+ ||+|++++..|.+.|++|++++|+.++++++.+.++...    .++.+   +.+.      .....|++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            36899997 799999999999999999999999999888877664321    22222   1110      1246899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        81 ~ag~~   85 (248)
T PRK10538         81 NAGLA   85 (248)
T ss_pred             CCCcc
Confidence            99864

>PRK06398 aldose dehydrogenase; Validated

Probab=96.96  E-value=0.0011  Score=67.59  Aligned_cols=71  Identities=23%  Similarity=0.244  Sum_probs=49.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---ccccc------CCCCccEEEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DLENF------NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~---~l~~~------~~~~~divIn  447 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++...    .....+|+.   ++.++      .....|++||
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~----~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND----VDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc----eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467899999998 699999999999999999999998654221    110111221   11110      2346899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        79 ~Ag~~   83 (258)
T PRK06398         79 NAGIE   83 (258)
T ss_pred             CCCCC
Confidence            98864

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=96.96  E-value=0.02  Score=58.05  Aligned_cols=131  Identities=19%  Similarity=0.197  Sum_probs=84.4

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nR----------t~~ka~~la~  422 (616)
                      +.|...+++..+...       ..++++++++|.|.|.+|+.++..|.+.|++|+ |.+.          +.++..+..+
T Consensus        11 g~Gv~~~~~~~~~~~-------~~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~   83 (227)
T cd01076          11 GRGVAYATREALKKL-------GIGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKK   83 (227)
T ss_pred             hHHHHHHHHHHHHhc-------CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHH
Confidence            578888887765432       246789999999999999999999999999877 7777          6777666666


Q ss_pred             HHCCc-------ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHH-HHHHHcCC
Q 007151          423 TVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL-REAEESGA  494 (616)
Q Consensus       423 ~~~~~-------~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll-~~A~~~G~  494 (616)
                      +.+..       .++.+++-   ..++|++|-|+..+...   ...++  .+ ..++++.-.-+|. |+-. +.-+++|+
T Consensus        84 ~~g~l~~~~~~~~~~~~~i~---~~~~Dvlip~a~~~~i~---~~~~~--~l-~a~~I~egAN~~~-t~~a~~~L~~rGi  153 (227)
T cd01076          84 EHGSVLGFPGAERITNEELL---ELDCDILIPAALENQIT---ADNAD--RI-KAKIIVEAANGPT-TPEADEILHERGV  153 (227)
T ss_pred             hcCCcccCCCceecCCccce---eecccEEEecCccCccC---HHHHh--hc-eeeEEEeCCCCCC-CHHHHHHHHHCCC
Confidence            54421       11112221   23689999999654321   11111  12 2467777776776 4432 22357898


Q ss_pred             eEEccHH
Q 007151          495 TIVSGLE  501 (616)
Q Consensus       495 ~~i~Gl~  501 (616)
                      .+++..-
T Consensus       154 ~~~PD~~  160 (227)
T cd01076         154 LVVPDIL  160 (227)
T ss_pred             EEEChHH
Confidence            8876443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.96  E-value=0.0024  Score=63.93  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~  441 (616)
                      +++++++|+|+ |++|++++..|++.|++|++++|+.++.+++++++..   ..    .++.+   +.++      ....
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56789999998 7999999999999999999999999888777665531   11    12211   1110      1246


Q ss_pred             ccEEEEcCCCCC
Q 007151          442 GMILANTTSIGM  453 (616)
Q Consensus       442 ~divInat~~gm  453 (616)
                      .|++|++++...
T Consensus        85 id~vi~~ag~~~   96 (239)
T PRK07666         85 IDILINNAGISK   96 (239)
T ss_pred             ccEEEEcCcccc
Confidence            899999998653

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.96  E-value=0.0039  Score=70.06  Aligned_cols=98  Identities=21%  Similarity=0.214  Sum_probs=67.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc-------------------------c
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD-------------------------L  434 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~-------------------------l  434 (616)
                      .+.+|+|+|+|.+|.+++..+..+|++|++++++.++.+ .++.++...+.++.                         +
T Consensus       163 p~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle-~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~  241 (511)
T TIGR00561       163 PPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE-QVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF  241 (511)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence            467999999999999999999999999999999988754 45556654422211                         1


Q ss_pred             cccCCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEeeCCc
Q 007151          435 ENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYTPK  481 (616)
Q Consensus       435 ~~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~P~  481 (616)
                      .+ ...++|++|+|+-+.-.|.  +.-+.++   .++++.+++|+...+.
T Consensus       242 ~e-~~~~~DIVI~TalipG~~a--P~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       242 AA-QAKEVDIIITTALIPGKPA--PKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HH-HhCCCCEEEECcccCCCCC--CeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            11 2456999999994321221  0113332   3577889999987654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0024  Score=64.61  Aligned_cols=72  Identities=25%  Similarity=0.327  Sum_probs=52.0

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---ccccCCCCccEEEEcC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENFNPEDGMILANTT  449 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~~~~~~divInat  449 (616)
                      +|+++|+|+ ||+|++++..|.+.|++|++..|+.++++++.+....   ..    .++.+   +........|+|||++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            468999998 7999999999999999999999998887777654321   11    23322   2111123689999998


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        82 g~~   84 (257)
T PRK09291         82 GIG   84 (257)
T ss_pred             CcC
Confidence            764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.95  E-value=0.0021  Score=65.32  Aligned_cols=74  Identities=34%  Similarity=0.420  Sum_probs=51.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.. .+++.+++.   ...    .++.+.   .++      ...
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467899999998 79999999999999999999999853 344544442   111    222221   110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        84 ~id~lv~nAg~~   95 (260)
T PRK12823         84 RIDVLINNVGGT   95 (260)
T ss_pred             CCeEEEECCccc
Confidence            689999998743

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.94  E-value=0.0022  Score=64.16  Aligned_cols=72  Identities=21%  Similarity=0.243  Sum_probs=49.2

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEEEEc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILANT  448 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~divIna  448 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++.+|+.++..+..+..+...  .++.+   +..+      .....|++||+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            478999998 699999999999999999999998765433333333221  22221   1110      23458999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        82 ag~~   85 (236)
T PRK06483         82 ASDW   85 (236)
T ss_pred             Cccc
Confidence            9853

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0028  Score=64.23  Aligned_cols=75  Identities=27%  Similarity=0.321  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---c--cchhccc---cc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---A--LSLADLE---NF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~---~--~~~~~l~---~~------~~~~~  442 (616)
                      .+++++++|+|+ |++|++++..|.+.|++|++++|+.+..+++.+.....   .  .++.+.+   +.      .....
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999998 79999999999999999999999998888887765422   1  2222111   10      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+||++++..
T Consensus        88 d~vi~~ag~~   97 (264)
T PRK12829         88 DVLVNNAGIA   97 (264)
T ss_pred             CEEEECCCCC
Confidence            9999998753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.93  E-value=0.0031  Score=70.94  Aligned_cols=97  Identities=25%  Similarity=0.281  Sum_probs=66.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch--hc-----------cc-c--------c
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL--AD-----------LE-N--------F  437 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~--~~-----------l~-~--------~  437 (616)
                      .+.+|+|+|+|.+|..++..+...|++|+++++++++.+ .++++|.....+  .+           .. +        +
T Consensus       164 pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~  242 (509)
T PRK09424        164 PPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF  242 (509)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence            478999999999999999999999999999999998865 555677653211  10           00 0        0


Q ss_pred             --CCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEeeC
Q 007151          438 --NPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       438 --~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                        ...++|++|+|++..-.+.  +..+.++   ..+++.+++|+...
T Consensus       243 ~~~~~gaDVVIetag~pg~~a--P~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        243 AEQAKEVDIIITTALIPGKPA--PKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HhccCCCCEEEECCCCCcccC--cchHHHHHHHhcCCCCEEEEEccC
Confidence              1246899999998632211  1112222   35788899999873

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.91  E-value=0.0025  Score=63.02  Aligned_cols=75  Identities=23%  Similarity=0.250  Sum_probs=59.2

Q ss_pred             CCcEEEEEcc--chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh----------cccccCCCCccEE
Q 007151          380 AGKLFVVIGA--GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA----------DLENFNPEDGMIL  445 (616)
Q Consensus       380 ~~k~vlVlGA--GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~----------~l~~~~~~~~div  445 (616)
                      +.|.|+|+|.  ||+|.|++..+++.|+.|+.+.|+.++...|+.+++-..  +|+.          ++.++..+..|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            4589999996  899999999999999999999999999999998887433  2221          1222234568999


Q ss_pred             EEcCCCCCC
Q 007151          446 ANTTSIGMQ  454 (616)
Q Consensus       446 Inat~~gm~  454 (616)
                      +|+++....
T Consensus        86 ~NNAG~~C~   94 (289)
T KOG1209|consen   86 YNNAGQSCT   94 (289)
T ss_pred             EcCCCCCcc
Confidence            999987653

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0028  Score=65.03  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=54.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~---l~~~------~  438 (616)
                      ++++|+++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+++.     ...    .++.+   +...      .
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999998 799999999999999999999999888777766542     111    13222   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        84 ~~~~d~li~~ag~~   97 (276)
T PRK05875         84 HGRLHGVVHCAGGS   97 (276)
T ss_pred             cCCCCEEEECCCcc
Confidence            23679999998753

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.91  E-value=0.0015  Score=67.93  Aligned_cols=130  Identities=15%  Similarity=0.155  Sum_probs=79.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCC----CeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G----~~V~v~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..++.+||+|-+|.+++..|.+.|    .+|++++|+. ++++.+++.++....  .+..+ ...++|+||-+++.....
T Consensus         3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~--~~~~e-~~~~aDvVilav~p~~~~   79 (279)
T PRK07679          3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT--HNKKE-LLTDANILFLAMKPKDVA   79 (279)
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe--CCHHH-HHhcCCEEEEEeCHHHHH
Confidence            357999999999999999999988    4899999976 577888877664322  11111 124579999988854321


Q ss_pred             CCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcC
Q 007151          456 KVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG  516 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG  516 (616)
                      ..- ..+. ..+.+..+++|+.-+= ....++.....+.+++.+..+...+-..+...|.+
T Consensus        80 ~vl-~~l~-~~~~~~~liIs~~aGi-~~~~l~~~~~~~~~v~r~mPn~~~~~~~~~t~~~~  137 (279)
T PRK07679         80 EAL-IPFK-EYIHNNQLIISLLAGV-STHSIRNLLQKDVPIIRAMPNTSAAILKSATAISP  137 (279)
T ss_pred             HHH-HHHH-hhcCCCCEEEEECCCC-CHHHHHHHcCCCCeEEEECCCHHHHHhcccEEEee
Confidence            100 0111 1245567899985331 12223434345667887766654433344445544

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.90  E-value=0.0031  Score=66.34  Aligned_cols=76  Identities=28%  Similarity=0.379  Sum_probs=53.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC---Ccc----cchhc---cccc-----CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF-----NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~---~~~----~~~~~---l~~~-----~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|. .++++++++++.   ...    .++.+   +..+     ..
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            5688999999998 699999999999999999998874 456666666542   221    12221   1110     12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        88 g~iD~li~nAG~~  100 (306)
T PRK07792         88 GGLDIVVNNAGIT  100 (306)
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.90  E-value=0.0034  Score=63.72  Aligned_cols=76  Identities=28%  Similarity=0.396  Sum_probs=55.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+++++.   .+.    +|+.+.   .++      ..
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3567899999998 699999999999999999999999888887766542   111    232221   110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        87 ~~~d~li~~ag~~   99 (255)
T PRK06113         87 GKVDILVNNAGGG   99 (255)
T ss_pred             CCCCEEEECCCCC
Confidence            4679999998853

>PLN02494 adenosylhomocysteinase

Probab=96.90  E-value=0.0029  Score=70.08  Aligned_cols=69  Identities=33%  Similarity=0.400  Sum_probs=51.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+.||+++|+|.|.+|+.++..+...|++|+++++++.++... ...+....++++.    ...+|++|.|++
T Consensus       250 i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv~leEa----l~~ADVVI~tTG  318 (477)
T PLN02494        250 VMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVLTLEDV----VSEADIFVTTTG  318 (477)
T ss_pred             CccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeeccHHHH----HhhCCEEEECCC
Confidence            45789999999999999999999999999999999998775432 2233333333332    234788888776

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.89  E-value=0.0032  Score=66.20  Aligned_cols=108  Identities=19%  Similarity=0.254  Sum_probs=72.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.|+|.|-+|.+++..|.+.|.+|+++||++++.+++.+. +... .+..+    ...+.|+||-++|....  .....
T Consensus         3 ~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~-g~~~~~s~~~----~~~~aDvVi~~vp~~~~--~~~vl   75 (296)
T PRK15461          3 AIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK-GATPAASPAQ----AAAGAEFVITMLPNGDL--VRSVL   75 (296)
T ss_pred             eEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCcccCCHHH----HHhcCCEEEEecCCHHH--HHHHH
Confidence            68999999999999999999999999999999998887654 2221 12222    13457999998886421  00000


Q ss_pred             cc----cccccCccEEEEEeeCCcc-c-HHHHHHHHcCCeEE
Q 007151          462 IP----KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIV  497 (616)
Q Consensus       462 i~----~~~l~~~~~v~Di~Y~P~~-T-~ll~~A~~~G~~~i  497 (616)
                      ..    ...++++.+++|+.-.+.. + .+.++.+++|+.++
T Consensus        76 ~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~l  117 (296)
T PRK15461         76 FGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMM  117 (296)
T ss_pred             cCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEE
Confidence            00    0124567889999876543 3 34455667786654

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.88  E-value=0.0019  Score=68.18  Aligned_cols=186  Identities=16%  Similarity=0.117  Sum_probs=104.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .+++.|+|+|.+|.+++..|.+.|.  +|++++|+.++.+.+. ..+.......+..+ ...++|+||.|+|.......-
T Consensus         6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~-~~~~aDvViiavp~~~~~~v~   83 (307)
T PRK07502          6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTTSAAE-AVKGADLVILCVPVGASGAVA   83 (307)
T ss_pred             CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecCCHHH-HhcCCCEEEECCCHHHHHHHH
Confidence            3689999999999999999999985  8999999988766553 33321111112222 235689999999975421100


Q ss_pred             CCccccccccCccEEEEEeeCCcccHHHHHHHH---cCCeEEccHHHHHHH--HH--HHHHHHcCCCC---CC-chHHHH
Q 007151          459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMFIGQ--AY--EQYERFTGLPG---KM-NAPHLY  527 (616)
Q Consensus       459 ~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~Gl~MLv~Q--a~--~qf~lwtG~~~---p~-~~~~l~  527 (616)
                       ..+. ..++++.+++|+....  ...+++..+   .+..++.+-.|.--.  +.  ..-.++.|...   |. ...  .
T Consensus        84 -~~l~-~~l~~~~iv~dvgs~k--~~~~~~~~~~~~~~~~~v~~hPm~g~e~~G~~~a~~~l~~g~~~~l~~~~~~~--~  157 (307)
T PRK07502         84 -AEIA-PHLKPGAIVTDVGSVK--ASVIAAMAPHLPEGVHFIPGHPLAGTEHSGPDAGFAELFENRWCILTPPEGTD--P  157 (307)
T ss_pred             -HHHH-hhCCCCCEEEeCccch--HHHHHHHHHhCCCCCeEEeCCCCCCCcccchhhcCHHHHCCCeEEEeCCCCCC--H
Confidence             0011 2356677888986532  334444433   355777776664200  11  12345545311   11 111  1


Q ss_pred             HHHHHHHhhcccccceecccccCCccchhchhhhhhcCceeehhhHHHHHHHHHHHhh
Q 007151          528 KFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSV  585 (616)
Q Consensus       528 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  585 (616)
                      +.++.++.+.+.+          |.... .+=++.|.+.+-+.--..|++...|..++
T Consensus       158 ~~~~~~~~l~~~l----------G~~~~-~~~~~~hD~~~A~~s~lph~~a~~l~~~~  204 (307)
T PRK07502        158 AAVARLTAFWRAL----------GARVE-EMDPEHHDLVLAITSHLPHLIAYTIVGTA  204 (307)
T ss_pred             HHHHHHHHHHHHc----------CCEEE-EcCHHHHhHHHHHHhhHHHHHHHHHHHHH
Confidence            2222222223322          32211 22267777777777777888888777666

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.87  E-value=0.0031  Score=66.04  Aligned_cols=111  Identities=14%  Similarity=0.196  Sum_probs=74.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++.|+|.|.+|.+++..|++.|.+|++++|+.++.+++.+. +... .+++++    ..++|+||-++|....  ....
T Consensus         3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~~~~~~~e~----~~~~d~vi~~vp~~~~--~~~v   75 (296)
T PRK11559          3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAETASTAKAV----AEQCDVIITMLPNSPH--VKEV   75 (296)
T ss_pred             ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCeecCCHHHH----HhcCCEEEEeCCCHHH--HHHH
Confidence            469999999999999999999999999999999988776543 2221 122222    3458999999985421  0100


Q ss_pred             ccc----cccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEcc
Q 007151          461 PIP----KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVSG  499 (616)
Q Consensus       461 pi~----~~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~G  499 (616)
                      ...    ...+.++.+++|+...+..+  .+.+..+++|..+++.
T Consensus        76 ~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d~  120 (296)
T PRK11559         76 ALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLDA  120 (296)
T ss_pred             HcCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEc
Confidence            000    11345678899998865543  4555556677776654

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0029  Score=62.83  Aligned_cols=75  Identities=27%  Similarity=0.294  Sum_probs=53.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc--cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA--LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~--~~~~~---l~~~------~~~~~  442 (616)
                      .+++|+++|+|+ |++|++++..|.+.|++|++++|+.++..+..+++..   ..  .++.+   +...      .....
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            356899999998 7999999999999999999999988776665544321   11  22221   1110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+||++++..
T Consensus        84 d~vi~~ag~~   93 (239)
T PRK12828         84 DALVNIAGAF   93 (239)
T ss_pred             CEEEECCccc
Confidence            9999988753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.85  E-value=0.0032  Score=63.26  Aligned_cols=74  Identities=24%  Similarity=0.323  Sum_probs=54.0

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~  441 (616)
                      +++++++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++.   .+.    .++.+   +.++      ....
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56889999998 899999999999999999999999988877766542   111    22211   1110      1245


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|.||++++..
T Consensus        83 id~vi~~ag~~   93 (253)
T PRK08217         83 LNGLINNAGIL   93 (253)
T ss_pred             CCEEEECCCcc
Confidence            79999998753

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0036  Score=64.42  Aligned_cols=72  Identities=29%  Similarity=0.388  Sum_probs=53.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divI  446 (616)
                      +|+++|+|+ ||+|++++..|.+.|++|++..|+.++.+++.+.++...    .++.+   +.++      .....|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999998 799999999999999999999999988887776654321    22211   1110      134679999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        83 ~~ag~~   88 (275)
T PRK08263         83 NNAGYG   88 (275)
T ss_pred             ECCCCc
Confidence            999864

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.85  E-value=0.0026  Score=66.95  Aligned_cols=111  Identities=22%  Similarity=0.169  Sum_probs=71.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.|||.|-+|.+++..|.+.|.+|+++||+.++++++.+ .+... .+.+++.+ ...++|+|+-++|..-.  ... -
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~~~s~~~~~~-~~~~advVi~~vp~~~~--~~~-v   76 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK-LGITARHSLEELVS-KLEAPRTIWVMVPAGEV--TES-V   76 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCeecCCHHHHHH-hCCCCCEEEEEecCchH--HHH-H
Confidence            5889999999999999999999999999999999888754 34322 13333221 12236899988885410  000 0


Q ss_pred             ccc--ccccCccEEEEEeeC-CcccH-HHHHHHHcCCeEEc
Q 007151          462 IPK--HALGHYALVFDAVYT-PKITR-LLREAEESGATIVS  498 (616)
Q Consensus       462 i~~--~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G~~~i~  498 (616)
                      +..  ..+.++.+++|+.-. |..+. +.+.++++|+..++
T Consensus        77 ~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vd  117 (299)
T PRK12490         77 IKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVD  117 (299)
T ss_pred             HHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEe
Confidence            111  124567899999553 44433 33444567776664

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0015  Score=66.19  Aligned_cols=39  Identities=33%  Similarity=0.529  Sum_probs=35.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            467899999998 799999999999999999999998765

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.84  E-value=0.0028  Score=65.93  Aligned_cols=109  Identities=17%  Similarity=0.211  Sum_probs=74.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHC--CCeEE-EEECCHHHHHHHHHHHCC-c-ccchhcccccCCCCccEEEEcCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAK--GARVV-IANRTYDRARELAETVGG-H-ALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~--G~~V~-v~nRt~~ka~~la~~~~~-~-~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      +..++.|+|.|.+|+.++..|.+.  ++++. +++|+.+++++++++++. . ..+++++    ..+.|+|+.|+|...+
T Consensus         5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eel----l~~~D~Vvi~tp~~~h   80 (271)
T PRK13302          5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQL----ATHADIVVEAAPASVL   80 (271)
T ss_pred             CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHH----hcCCCEEEECCCcHHH
Confidence            347899999999999999999873  66654 899999999999988863 2 2244444    2357999999996543


Q ss_pred             CCCCCCccccccccCccEEEEEeeCC--cccHHHHHHHHcCCeEE
Q 007151          455 PKVDETPIPKHALGHYALVFDAVYTP--KITRLLREAEESGATIV  497 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y~P--~~T~ll~~A~~~G~~~i  497 (616)
                      .     .+....++.+.-++...-..  ....+.+.|++.|.++.
T Consensus        81 ~-----e~~~~aL~aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l~  120 (271)
T PRK13302         81 R-----AIVEPVLAAGKKAIVLSVGALLRNEDLIDLARQNGGQII  120 (271)
T ss_pred             H-----HHHHHHHHcCCcEEEecchhHHhHHHHHHHHHHcCCEEE
Confidence            2     12233455555455443221  13566778888898864

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=96.84  E-value=0.0026  Score=60.67  Aligned_cols=69  Identities=26%  Similarity=0.318  Sum_probs=51.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      +++|++.|+|.|.-|++-+..|.+.|++|+|..|+.++..+.|++-|-++.++++..    ..+|+|+..+|-
T Consensus         2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv----~~aDvV~~L~PD   70 (165)
T PF07991_consen    2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAV----KKADVVMLLLPD   70 (165)
T ss_dssp             HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHH----HC-SEEEE-S-H
T ss_pred             cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHH----hhCCEEEEeCCh
Confidence            468999999999999999999999999999999998888888888776666665432    347899988874

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0034  Score=64.47  Aligned_cols=71  Identities=23%  Similarity=0.340  Sum_probs=52.8

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCccEEEE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMILAN  447 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~divIn  447 (616)
                      |+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+..+...    .++.+.   .++      .....|+|||
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            68999997 899999999999999999999999988888766544321    233221   110      1345799999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        83 ~ag~~   87 (276)
T PRK06482         83 NAGYG   87 (276)
T ss_pred             CCCCC
Confidence            99865

>PLN02199 shikimate kinase

Probab=96.84  E-value=0.001  Score=69.42  Aligned_cols=63  Identities=13%  Similarity=-0.028  Sum_probs=50.6

Q ss_pred             cCCCCCCchHHHHHHHHHHHhhcccccceecccccCCccchhchhhhhhcCceeehhhHHHHH
Q 007151          515 TGLPGKMNAPHLYKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYM  577 (616)
Q Consensus       515 tG~~~p~~~~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (616)
                      +|.-.|.+...|++...+|+.....-+++||||+|+||||+|+.||+.++.+|+=+=.-||-.
T Consensus        78 ~~~~~~~de~~Lk~~a~~i~~~l~~~~I~LIG~~GSGKSTVgr~LA~~Lg~~fIDtD~lIe~~  140 (303)
T PLN02199         78 TGSVYPFDEDILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQA  140 (303)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHHHhCCCEEehHHHHHHH
Confidence            344336666668888888866656679999999999999999999999999999777666654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.84  E-value=0.0031  Score=63.26  Aligned_cols=74  Identities=31%  Similarity=0.362  Sum_probs=53.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~~  441 (616)
                      +.+|+++|+|+ |++|++++..|.+.|++|+++.|+.++..++.+.+..   ..    .++.+.   .++      ....
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999997 7999999999999999999999998877766655431   11    122221   110      1236


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+||++++..
T Consensus        84 ~d~vi~~ag~~   94 (251)
T PRK12826         84 LDILVANAGIF   94 (251)
T ss_pred             CCEEEECCCCC
Confidence            89999998653

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0031  Score=64.74  Aligned_cols=71  Identities=28%  Similarity=0.419  Sum_probs=51.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Cc-----ccchhcccc---c------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GH-----ALSLADLEN---F------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~-----~~~~~~l~~---~------~~~~~d  443 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ..     ..|+.+.++   +      .....|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899998 799999999999999999999999888777766542   11     123222111   0      234589


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++.+
T Consensus        81 ~lv~~ag~~   89 (272)
T PRK07832         81 VVMNIAGIS   89 (272)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.83  E-value=0.0015  Score=71.15  Aligned_cols=71  Identities=20%  Similarity=0.293  Sum_probs=51.3

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC-------------------HHHHHHHHHHHCC--cccchh----
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT-------------------YDRARELAETVGG--HALSLA----  432 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt-------------------~~ka~~la~~~~~--~~~~~~----  432 (616)
                      +++++|+|+|+||+|..++..|+..|+ ++++++++                   ..|++.+++.+..  ..+.+.    
T Consensus       133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            456899999999999999999999999 99999998                   4577777766632  111110    


Q ss_pred             -----cccccCCCCccEEEEcCC
Q 007151          433 -----DLENFNPEDGMILANTTS  450 (616)
Q Consensus       433 -----~l~~~~~~~~divInat~  450 (616)
                           .+.+ .+.++|+||+|+-
T Consensus       213 ~~~~~~~~~-~~~~~D~Vv~~~d  234 (376)
T PRK08762        213 RVTSDNVEA-LLQDVDVVVDGAD  234 (376)
T ss_pred             cCChHHHHH-HHhCCCEEEECCC
Confidence                 1111 1346899999875

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.0016  Score=66.23  Aligned_cols=40  Identities=38%  Similarity=0.419  Sum_probs=36.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~   45 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD   45 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh
Confidence            3578999999998 799999999999999999999998654

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.82  E-value=0.015  Score=58.54  Aligned_cols=150  Identities=17%  Similarity=0.184  Sum_probs=88.4

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH----------HHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY----------DRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~----------~ka~~la~  422 (616)
                      +.|...+++..+...       +.++++++++|.|-|.+|+.++..|.+.|+ .|.|.+.+.          +..+...+
T Consensus         3 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~   75 (217)
T cd05211           3 GYGVVVAMKAAMKHL-------GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVA   75 (217)
T ss_pred             hhHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHh
Confidence            467777777655431       246889999999999999999999999999 677787766          44433333


Q ss_pred             HHCCcccch-hcc--cccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEcc
Q 007151          423 TVGGHALSL-ADL--ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSG  499 (616)
Q Consensus       423 ~~~~~~~~~-~~l--~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G  499 (616)
                      ..+....+- +.+  .++...++|++|-|+.-+..   +..+..  .+. .++++.-.-+|....--+.-+++|..+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~~~DVlipaA~~~~i---~~~~a~--~l~-a~~V~e~AN~p~t~~a~~~L~~~Gi~v~Pd  149 (217)
T cd05211          76 LGGSARVKVQDYFPGEAILGLDVDIFAPCALGNVI---DLENAK--KLK-AKVVAEGANNPTTDEALRILHERGIVVAPD  149 (217)
T ss_pred             hCCccccCcccccCcccceeccccEEeeccccCcc---ChhhHh--hcC-ccEEEeCCCCCCCHHHHHHHHHCCcEEECh
Confidence            222111111 001  11112368999998885532   111111  122 467777776664322222225678888877


Q ss_pred             HHHHHHHHHHHHHHHcC
Q 007151          500 LEMFIGQAYEQYERFTG  516 (616)
Q Consensus       500 l~MLv~Qa~~qf~lwtG  516 (616)
                      .-+-.-.-+.++.-|.+
T Consensus       150 ~~~NaGGvi~s~~E~~q  166 (217)
T cd05211         150 IVANAGGVIVSYFEWVQ  166 (217)
T ss_pred             HHhcCCCeEeEHHHhcC
Confidence            66654433444555554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0025  Score=65.43  Aligned_cols=70  Identities=30%  Similarity=0.405  Sum_probs=50.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEEEEcC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILANTT  449 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~divInat  449 (616)
                      |+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+. +...  .++.+   +.++      .....|++||++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            68999998 7999999999999999999999998887766432 2211  22221   1110      224689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +.+
T Consensus        81 g~~   83 (274)
T PRK05693         81 GYG   83 (274)
T ss_pred             CCC
Confidence            864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.82  E-value=0.0035  Score=62.48  Aligned_cols=74  Identities=35%  Similarity=0.451  Sum_probs=53.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc---cc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~---~~------~~~~  441 (616)
                      +.+++++|+|+ |++|+.++..|.+.|++|++++|+.++.+.+...+.   .+.    .++.+..   +.      ....
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45689999998 899999999999999999999999988777766543   111    2222111   10      1245


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|.+|++++..
T Consensus        83 id~vi~~ag~~   93 (246)
T PRK05653         83 LDILVNNAGIT   93 (246)
T ss_pred             CCEEEECCCcC
Confidence            79999998753

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.0033  Score=64.03  Aligned_cols=75  Identities=33%  Similarity=0.453  Sum_probs=53.8

Q ss_pred             ccCCcEEEEEcc-c-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CC-cc----cchhc---cccc------
Q 007151          378 ALAGKLFVVIGA-G-GAGKALAYGAKAKGARVVIANRTYDRARELAETV----GG-HA----LSLAD---LENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-G-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~-~~----~~~~~---l~~~------  437 (616)
                      .+++|+++|+|+ | |+|++++..|++.|++|++.+|+.++.++..+++    +. ..    .|+.+   +..+      
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            456899999997 6 8999999999999999999999988777665543    21 11    13221   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      ..+..|++||+++..
T Consensus        94 ~~g~id~li~~ag~~  108 (262)
T PRK07831         94 RLGRLDVLVNNAGLG  108 (262)
T ss_pred             HcCCCCEEEECCCCC
Confidence            124689999999863

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.0031  Score=66.53  Aligned_cols=36  Identities=28%  Similarity=0.495  Sum_probs=32.3

Q ss_pred             cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEEC
Q 007151          377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       377 ~~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nR  412 (616)
                      .+++||.++|+|+|   |+|+++|.+|++.|++|++..|
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            35789999999995   9999999999999999999654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.80  E-value=0.0033  Score=63.18  Aligned_cols=73  Identities=23%  Similarity=0.344  Sum_probs=53.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCc
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~  442 (616)
                      ++++++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+.+.   ...    .++.+   +.++      .....
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999998 799999999999999999999999988887765542   111    12211   1110      12457


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++|++++..
T Consensus        82 d~vi~~ag~~   91 (250)
T TIGR03206        82 DVLVNNAGWD   91 (250)
T ss_pred             CEEEECCCCC
Confidence            9999999753

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.0043  Score=62.85  Aligned_cols=72  Identities=26%  Similarity=0.345  Sum_probs=53.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c----ccchhccccc---------CCCCccEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----ALSLADLENF---------NPEDGMIL  445 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~----~~~~~~l~~~---------~~~~~div  445 (616)
                      +|+++|+|+ |++|++++..|++.|++|++++|+.++++.+++.+.. .    ..++.+.+++         .....|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            478999998 7999999999999999999999999998888776532 1    1232221110         12357999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      |++++..
T Consensus        82 i~~ag~~   88 (257)
T PRK07074         82 VANAGAA   88 (257)
T ss_pred             EECCCCC
Confidence            9999764

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.80  E-value=0.0032  Score=66.82  Aligned_cols=95  Identities=19%  Similarity=0.179  Sum_probs=57.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCccEEEEcCCCCCC-
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQ-  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~-  454 (616)
                      .+++.|+|+|.-|+.-+.++.. .+. +|.|++|+.++++++++++..   .....++.++ ...++|+|+-||+.... 
T Consensus       128 ~~~l~viGaG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~-av~~aDii~taT~s~~~~  206 (313)
T PF02423_consen  128 ARTLGVIGAGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEE-AVRGADIIVTATPSTTPA  206 (313)
T ss_dssp             --EEEEE--SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHH-HHTTSSEEEE----SSEE
T ss_pred             CceEEEECCCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhh-hcccCCEEEEccCCCCCC
Confidence            3689999999999999998876 566 899999999999999998865   1122233333 35668999999996521 


Q ss_pred             CCCCCCccccccccCccEEEEEee-CCc
Q 007151          455 PKVDETPIPKHALGHYALVFDAVY-TPK  481 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y-~P~  481 (616)
                      |.     +..++++++..+.-+-. .|.
T Consensus       207 P~-----~~~~~l~~g~hi~~iGs~~~~  229 (313)
T PF02423_consen  207 PV-----FDAEWLKPGTHINAIGSYTPG  229 (313)
T ss_dssp             ES-----B-GGGS-TT-EEEE-S-SSTT
T ss_pred             cc-----ccHHHcCCCcEEEEecCCCCc
Confidence            22     55568888777665543 343

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK05855 short chain dehydrogenase; Validated

Probab=96.80  E-value=0.0036  Score=70.89  Aligned_cols=76  Identities=33%  Similarity=0.464  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc---cc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~---~~------~~~  440 (616)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++++.+.   ...    +|+.+.+   ++      ..+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            466789999998 899999999999999999999999998888877653   111    2332211   10      234


Q ss_pred             CccEEEEcCCCCC
Q 007151          441 DGMILANTTSIGM  453 (616)
Q Consensus       441 ~~divInat~~gm  453 (616)
                      ..|++||+++...
T Consensus       392 ~id~lv~~Ag~~~  404 (582)
T PRK05855        392 VPDIVVNNAGIGM  404 (582)
T ss_pred             CCcEEEECCccCC
Confidence            6899999998753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.80  E-value=0.0034  Score=63.15  Aligned_cols=74  Identities=26%  Similarity=0.410  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      +.+++++|+|+ ||+|++++..|.+.|++|++ ..|+.++.+++++++.   ...    .++.+   +..+      ...
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35689999998 79999999999999998765 6888888877766652   111    22221   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++.+
T Consensus        82 ~id~vi~~ag~~   93 (250)
T PRK08063         82 RLDVFVNNAASG   93 (250)
T ss_pred             CCCEEEECCCCC
Confidence            589999998764

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.79  E-value=0.0049  Score=67.48  Aligned_cols=69  Identities=33%  Similarity=0.416  Sum_probs=53.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+.|++|+|+|.|.+|+.++..+...|++|+++++++.++.... ..+....+.++.    ....|++|.+|+
T Consensus       191 ~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~v~~leea----l~~aDVVItaTG  259 (406)
T TIGR00936       191 LLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFRVMTMEEA----AKIGDIFITATG  259 (406)
T ss_pred             CCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCEeCCHHHH----HhcCCEEEECCC
Confidence            357899999999999999999999999999999999988764433 334443344332    345799998886

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.79  E-value=0.0035  Score=63.19  Aligned_cols=47  Identities=26%  Similarity=0.476  Sum_probs=42.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      .+++|+++|+|+ |++|.+++..|++.|++|++++|+.++++++.+++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l   56 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEI   56 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Confidence            467899999998 79999999999999999999999998888877665

>PRK05599 hypothetical protein; Provisional

Probab=96.79  E-value=0.0034  Score=63.72  Aligned_cols=70  Identities=19%  Similarity=0.202  Sum_probs=51.0

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c---c--cchhcc---ccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H---A--LSLADL---ENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~---~--~~~~~l---~~~------~~~~~d  443 (616)
                      ++++|+|+ +|+|++++..|+ .|++|++++|+.++++++++++..   .   .  +|+.+.   .++      ..+..|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            46899998 599999999999 599999999999999988776631   1   1  222221   110      235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        80 ~lv~nag~~   88 (246)
T PRK05599         80 LAVVAFGIL   88 (246)
T ss_pred             EEEEecCcC
Confidence            999998753

>PRK06823 ornithine cyclodeaminase; Validated

Probab=96.78  E-value=0.014  Score=62.11  Aligned_cols=89  Identities=10%  Similarity=0.075  Sum_probs=64.6

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc---ccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH---ALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~~---~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      -+++.|+|+|..|+.-+.++... .. +|+|+||+.++++++++.+...   ....++.++ ...++|+|+-||+.. .|
T Consensus       128 ~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIV~taT~s~-~P  205 (315)
T PRK06823        128 VSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAE-VAHAANLIVTTTPSR-EP  205 (315)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHH-HhcCCCEEEEecCCC-Cc
Confidence            47899999999999999888764 45 8999999999999998776422   111233333 356799999999854 23


Q ss_pred             CCCCCccccccccCccEEEEE
Q 007151          456 KVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .     +..++++++..+.=+
T Consensus       206 ~-----~~~~~l~~G~hi~~i  221 (315)
T PRK06823        206 L-----LQAEDIQPGTHITAV  221 (315)
T ss_pred             e-----eCHHHcCCCcEEEec
Confidence            2     445688887665544

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.78  E-value=0.004  Score=63.42  Aligned_cols=75  Identities=28%  Similarity=0.396  Sum_probs=51.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC---Ccc----cchhcccc---c------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLADLEN---F------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~---~~~----~~~~~l~~---~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++..|+ .+..+++.+++.   .+.    .++.+.++   +      ..
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999998 699999999999999998888884 455555555442   111    23322111   0      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        84 g~id~lv~~ag~~   96 (261)
T PRK08936         84 GTLDVMINNAGIE   96 (261)
T ss_pred             CCCCEEEECCCCC
Confidence            4689999998864

>PRK13948 shikimate kinase; Provisional

Probab=96.76  E-value=0.00044  Score=67.62  Aligned_cols=41  Identities=7%  Similarity=-0.171  Sum_probs=34.1

Q ss_pred             cccccceecccccCCccchhchhhhhhcCceeehhhHHHHH
Q 007151          537 FNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYM  577 (616)
Q Consensus       537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (616)
                      ...-+++|+||||+||||+|+.||+.++.+||=+=.-|+-+
T Consensus         8 ~~~~~I~LiG~~GsGKSTvg~~La~~lg~~~iD~D~~ie~~   48 (182)
T PRK13948          8 RPVTWVALAGFMGTGKSRIGWELSRALMLHFIDTDRYIERV   48 (182)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHcCCCEEECCHHHHHH
Confidence            44468999999999999999999999999998665555443

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.75  E-value=0.0037  Score=69.44  Aligned_cols=91  Identities=29%  Similarity=0.270  Sum_probs=64.4

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||+++|+|.|.+|+++|..|...|++|+++++++.++..... .+....+++++    ...+|+||.+|+.  .. 
T Consensus       250 ~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~~leel----l~~ADIVI~atGt--~~-  321 (476)
T PTZ00075        250 VMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVVTLEDV----VETADIFVTATGN--KD-  321 (476)
T ss_pred             CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceeccHHHH----HhcCCEEEECCCc--cc-
Confidence            5789999999999999999999999999999999999877644332 34444444432    3458999988752  11 


Q ss_pred             CCCCccccc---cccCccEEEEEeeC
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                          .+..+   .++++.+++++...
T Consensus       322 ----iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        322 ----IITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ----ccCHHHHhccCCCcEEEEcCCC
Confidence                13322   24666777777654

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=96.75  E-value=0.0066  Score=64.82  Aligned_cols=89  Identities=17%  Similarity=0.119  Sum_probs=63.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      .+++.|+|+|.+|++-+.++... .. +|+|++|+.++++++++++..   .....++.++ ...++|+|+-|||.. .|
T Consensus       128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~e-av~~aDiVitaT~s~-~P  205 (325)
T TIGR02371       128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPRE-AVEGCDILVTTTPSR-KP  205 (325)
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHH-HhccCCEEEEecCCC-Cc
Confidence            47899999999999988777653 34 899999999999999887642   1112233333 345789999999853 33


Q ss_pred             CCCCCccccccccCccEEEEE
Q 007151          456 KVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .     +..++++++..+.-+
T Consensus       206 ~-----~~~~~l~~g~~v~~v  221 (325)
T TIGR02371       206 V-----VKADWVSEGTHINAI  221 (325)
T ss_pred             E-----ecHHHcCCCCEEEec
Confidence            2     445678887766555

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0038  Score=72.45  Aligned_cols=75  Identities=28%  Similarity=0.413  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+   +.++      ...
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            577899999998 799999999999999999999999999888877652   111    23222   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++.+
T Consensus       448 ~id~li~~Ag~~  459 (657)
T PRK07201        448 HVDYLVNNAGRS  459 (657)
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0051  Score=63.06  Aligned_cols=72  Identities=18%  Similarity=0.275  Sum_probs=52.4

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~~di  444 (616)
                      ++++|+|+ ||+|++++..|.+.|++|+++.|+.++++++.+++..   ..    .++.+   +.++      .....|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899998 7999999999999999999999999988887665421   11    22222   1110      2346899


Q ss_pred             EEEcCCCCC
Q 007151          445 LANTTSIGM  453 (616)
Q Consensus       445 vInat~~gm  453 (616)
                      |||+++...
T Consensus        81 lI~~ag~~~   89 (270)
T PRK05650         81 IVNNAGVAS   89 (270)
T ss_pred             EEECCCCCC
Confidence            999998653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.74  E-value=0.0043  Score=62.96  Aligned_cols=74  Identities=24%  Similarity=0.369  Sum_probs=49.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCCcc--cchhc---cccc------CCCCccE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGGHA--LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~di  444 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++..|+ .+.++++.+. +...  .++.+   +.++      .....|+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999998 799999999999999988887654 4444444332 2211  22221   1110      2346899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus        83 li~~ag~~   90 (255)
T PRK06463         83 LVNNAGIM   90 (255)
T ss_pred             EEECCCcC
Confidence            99999864

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.74  E-value=0.0034  Score=66.89  Aligned_cols=69  Identities=25%  Similarity=0.321  Sum_probs=50.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      .++++++.|||.|-+|++++..|.+.|.+|++.+|+.++..+.+...+....+.+++    ..++|+|+.++|
T Consensus        14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~ea----a~~ADVVvLaVP   82 (330)
T PRK05479         14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEA----AKWADVIMILLP   82 (330)
T ss_pred             hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHH----HhcCCEEEEcCC
Confidence            578899999999999999999999999999999998777777666655433222221    223455555555

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.74  E-value=0.0046  Score=72.38  Aligned_cols=76  Identities=26%  Similarity=0.403  Sum_probs=56.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----C-c----ccchhc---cccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-H----ALSLAD---LENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~-~----~~~~~~---l~~~------  437 (616)
                      ..+++|+++|+|+ ||+|++++..|.+.|++|++++|+.++++++.+.+.    . .    ..++.+   +..+      
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999998 799999999999999999999999988887766543    1 1    123221   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|+|||+++..
T Consensus       490 ~~g~iDilV~nAG~~  504 (676)
T TIGR02632       490 AYGGVDIVVNNAGIA  504 (676)
T ss_pred             hcCCCcEEEECCCCC
Confidence            234689999999864

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.74  E-value=0.0026  Score=68.20  Aligned_cols=37  Identities=32%  Similarity=0.529  Sum_probs=34.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|+||.|..++..|+..|+ ++++++++.
T Consensus        21 ~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3667899999999999999999999999 999999974

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.73  E-value=0.0047  Score=62.68  Aligned_cols=73  Identities=23%  Similarity=0.303  Sum_probs=52.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---cccc------CCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~---l~~~------~~~~  441 (616)
                      +|+++|+|+ |++|++++..|++.|++|++++|+.++.+++++.+.     ...    .++.+   +..+      ....
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999998 699999999999999999999999888877765542     111    12221   1110      1246


Q ss_pred             ccEEEEcCCCCC
Q 007151          442 GMILANTTSIGM  453 (616)
Q Consensus       442 ~divInat~~gm  453 (616)
                      .|++||+++...
T Consensus        82 id~vv~~ag~~~   93 (259)
T PRK12384         82 VDLLVYNAGIAK   93 (259)
T ss_pred             CCEEEECCCcCC
Confidence            799999987553

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=96.73  E-value=0.0032  Score=70.68  Aligned_cols=112  Identities=21%  Similarity=0.188  Sum_probs=75.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCc----ccchhcccccCCCCccEEEEcCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGH----ALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~----~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      .++-+||-|-||+++|..|.+.|.+|+|+||+.++++++.+..   +..    +-+.+++.+ .+..+|+||-+.+.+-.
T Consensus         7 ~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~-~l~~~dvIi~~v~~~~a   85 (493)
T PLN02350          7 SRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVL-SIQKPRSVIILVKAGAP   85 (493)
T ss_pred             CCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHh-cCCCCCEEEEECCCcHH
Confidence            3699999999999999999999999999999999999988742   222    113333332 34458999987775521


Q ss_pred             CCCCCCccc--cccccCccEEEEEeeC-CcccHHH-HHHHHcCCeEE
Q 007151          455 PKVDETPIP--KHALGHYALVFDAVYT-PKITRLL-REAEESGATIV  497 (616)
Q Consensus       455 p~~~~~pi~--~~~l~~~~~v~Di~Y~-P~~T~ll-~~A~~~G~~~i  497 (616)
                        .+.. +.  ...+.++.+++|..-. |..|.-+ ++++++|+..+
T Consensus        86 --V~~V-i~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fl  129 (493)
T PLN02350         86 --VDQT-IKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYL  129 (493)
T ss_pred             --HHHH-HHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence              1111 10  1235678899999875 4555433 34456677654

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0041  Score=63.91  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=52.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----c----ccchhcccc------c--CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----H----ALSLADLEN------F--NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~----~~~~~~l~~------~--~~~~  441 (616)
                      ++|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+....     .    ..++.+.++      .  ....
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            4678999998 7999999999999999999999999888777654321     1    123222111      0  2345


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++|++++..
T Consensus        82 id~vv~~ag~~   92 (280)
T PRK06914         82 IDLLVNNAGYA   92 (280)
T ss_pred             eeEEEECCccc
Confidence            79999998753

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0048  Score=62.11  Aligned_cols=42  Identities=29%  Similarity=0.409  Sum_probs=38.2

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            57999997 8999999999999999999999999988887665

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0045  Score=63.77  Aligned_cols=37  Identities=43%  Similarity=0.654  Sum_probs=33.7

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|+++.|+.+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence            56899999998 79999999999999999999999764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.71  E-value=0.0028  Score=67.78  Aligned_cols=115  Identities=15%  Similarity=0.143  Sum_probs=78.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.|+++.|+|.|.+|+++|..|...|.+|+.++|+.+.......     .  ..++.+ ...++|+|+.++|....  +
T Consensus       143 ~l~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~-----~--~~~l~e-ll~~aDiVil~lP~t~~--t  212 (330)
T PRK12480        143 PVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT-----Y--KDSVKE-AIKDADIISLHVPANKE--S  212 (330)
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh-----c--cCCHHH-HHhcCCEEEEeCCCcHH--H
Confidence            578899999999999999999999999999999998765332111     1  112222 24568999999986421  0


Q ss_pred             CCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ...+...   .++++.+++++.-.+. ++.-+..|-+.|-..--|++++
T Consensus       213 -~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~  261 (330)
T PRK12480        213 -YHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTY  261 (330)
T ss_pred             -HHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEecc
Confidence             0112222   3467788888887655 4666777777776655666765

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0042  Score=63.40  Aligned_cols=73  Identities=15%  Similarity=0.124  Sum_probs=50.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHH-HHHHHHHHCC----c--c--cchhccc-------cc-CCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDR-ARELAETVGG----H--A--LSLADLE-------NF-NPE  440 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G-~~V~v~nRt~~k-a~~la~~~~~----~--~--~~~~~l~-------~~-~~~  440 (616)
                      .+++++|+|+ ||+|++++..|++.| ++|+++.|+.++ .+++++++..    .  .  .++.+..       .. ...
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            3578999998 799999999999996 799999999876 6666655521    1  1  2222211       10 124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        87 ~id~li~~ag~~   98 (253)
T PRK07904         87 DVDVAIVAFGLL   98 (253)
T ss_pred             CCCEEEEeeecC
Confidence            689999988753

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.70  E-value=0.0018  Score=71.82  Aligned_cols=114  Identities=24%  Similarity=0.337  Sum_probs=75.1

Q ss_pred             EEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.|+| .|++|++++..|.+.|.+|++++|+.+++++++.+++....  .+..+ ...++|+||-|+|......    .
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~--~~~~e-~~~~aDvVIlavp~~~~~~----v   74 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA--NDNID-AAKDADIVIISVPINVTED----V   74 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec--cCHHH-HhccCCEEEEecCHHHHHH----H
Confidence            689998 69999999999999999999999999988888887764321  12222 2345899999999743211    1


Q ss_pred             ccc--ccccCccEEEEEeeCC-cccHHHHHHHHcCCeEEccHHHH
Q 007151          462 IPK--HALGHYALVFDAVYTP-KITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       462 i~~--~~l~~~~~v~Di~Y~P-~~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      +..  ..+.++.+++|+.-.. .....++.....|..++.+-.|.
T Consensus        75 l~~l~~~l~~~~iViDvsSvK~~~~~~l~~~~~~~~~~V~~HPma  119 (437)
T PRK08655         75 IKEVAPHVKEGSLLMDVTSVKERPVEAMEEYAPEGVEILPTHPMF  119 (437)
T ss_pred             HHHHHhhCCCCCEEEEcccccHHHHHHHHHhcCCCCEEEEcCCCC
Confidence            111  1356778999998532 12222222222366777776654

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.68  E-value=0.0051  Score=64.06  Aligned_cols=198  Identities=16%  Similarity=0.109  Sum_probs=107.5

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++.|+|.|-+|.+++.+|.+.|.+|++++|+.++.+++.+. +.......+. + ...++|+||-|+|.......- ..+
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~-g~~~~~~~~~-~-~~~~aDlVilavp~~~~~~~~-~~l   77 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER-GLVDEASTDL-S-LLKDCDLVILALPIGLLLPPS-EQL   77 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCcccccCCH-h-HhcCCCEEEEcCCHHHHHHHH-HHH
Confidence            58999999999999999999999999999998887776543 2110011111 1 235689999999964321100 001


Q ss_pred             ccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHH------HHHHHHHHHHHcCCC---CCCc-hHHHHHHHHH
Q 007151          463 PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF------IGQAYEQYERFTGLP---GKMN-APHLYKFFVL  532 (616)
Q Consensus       463 ~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~ML------v~Qa~~qf~lwtG~~---~p~~-~~~l~~~l~~  532 (616)
                      . ..+.+..++.|+...+  +..++.+.+.+..++.+-.|.      +..|  .-.+|.|..   .|.. ..  .+.++.
T Consensus        78 ~-~~l~~~~ii~d~~Svk--~~~~~~~~~~~~~~v~~HPm~G~~~~g~~~a--~~~lf~g~~~~l~p~~~~~--~~~~~~  150 (279)
T PRK07417         78 I-PALPPEAIVTDVGSVK--APIVEAWEKLHPRFVGSHPMAGTAESGVEAG--QRGLFKNRPWVLTPTENTD--LNALAI  150 (279)
T ss_pred             H-HhCCCCcEEEeCcchH--HHHHHHHHHhhCCceeeCCcCCCCcchHHHh--hHHHhCCCcEEEccCCCCC--HHHHHH
Confidence            1 1245678888987654  445666665544455544443      2222  223566641   1111 11  122222


Q ss_pred             HHhhcccccceecccccCCccchhchhhhhhcCceeehhhHHHHHHHHHHHhhhhccc-e---eeEeeeccccc
Q 007151          533 LLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEA-S---LFIFFFGQKYK  602 (616)
Q Consensus       533 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~  602 (616)
                      ++.+.+.+          |+... .+=++.|.+.+-+.--..||....|..++.+++. .   +..-|-|.-|+
T Consensus       151 v~~l~~~l----------G~~~v-~~~~~~hD~~~a~~shlp~~~a~~l~~~~~~~~~~~~~~~~~~~~~~gfr  213 (279)
T PRK07417        151 VEELAVSL----------GSKIY-TADPEEHDRAVALISHLPVMVSAALIQTCGTEKDPSVLKLAQNLASSGFA  213 (279)
T ss_pred             HHHHHHHc----------CCEEE-EcCHHHHHHHHHHHcchHHHHHHHHHHHHhhcccchhhHHhhhhccCccc
Confidence            22223322          33221 1114556666656666677777777666644322 1   12345666666

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.67  E-value=0.0047  Score=61.77  Aligned_cols=74  Identities=38%  Similarity=0.486  Sum_probs=53.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLADLE---NF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~  440 (616)
                      +.+|+++|+|+ |++|++++..|++.|++|++. +|+.++.+++.+.+..   ..    .++.+..   .+      ...
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            56789999998 899999999999999998888 9998888777665432   11    2322211   10      123


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+||++++..
T Consensus        83 ~id~vi~~ag~~   94 (247)
T PRK05565         83 KIDILVNNAGIS   94 (247)
T ss_pred             CCCEEEECCCcC
Confidence            589999998764

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.0051  Score=61.85  Aligned_cols=70  Identities=29%  Similarity=0.346  Sum_probs=50.4

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc---CCCCccEEE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF---NPEDGMILA  446 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~---l~~~---~~~~~divI  446 (616)
                      |+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++.    ...    .++.+   +.++   .....|++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            68999997 899999999999999999999999988877766542    111    22222   1111   112469999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      ++++.
T Consensus        82 ~~ag~   86 (243)
T PRK07102         82 IAVGT   86 (243)
T ss_pred             ECCcC
Confidence            99874

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.006  Score=62.04  Aligned_cols=73  Identities=34%  Similarity=0.478  Sum_probs=52.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~~~d  443 (616)
                      +++++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+.+..   ..    .++.+.+   .+      .....|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            368999998 8999999999999999999999998888777665431   11    1222211   10      124589


Q ss_pred             EEEEcCCCCC
Q 007151          444 ILANTTSIGM  453 (616)
Q Consensus       444 ivInat~~gm  453 (616)
                      +|||+++...
T Consensus        81 ~vi~~ag~~~   90 (263)
T PRK06181         81 ILVNNAGITM   90 (263)
T ss_pred             EEEECCCccc
Confidence            9999987643

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.66  E-value=0.0039  Score=62.17  Aligned_cols=73  Identities=21%  Similarity=0.224  Sum_probs=50.3

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCccc--chhcccccCCCCccEEEEcCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHAL--SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~~~~~--~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+++|++|+|+|+|.+|..-+..|.+.|++|+|++.+.. ..++++++......  .+.  .. .+.++++||-||+.
T Consensus         4 ~l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~--~~-dl~~~~lVi~at~d   79 (205)
T TIGR01470         4 FANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFD--AD-ILEGAFLVIAATDD   79 (205)
T ss_pred             EEEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC--HH-HhCCcEEEEECCCC
Confidence            3578999999999999999999999999999999988653 44555543211110  111  01 13457888877764

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.66  E-value=0.0048  Score=65.15  Aligned_cols=86  Identities=22%  Similarity=0.314  Sum_probs=63.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      -+++.|+|+|.-|+.-+.++... .. +|.|++|+.++++++++++...    ....++.++ ...++|+|+-+|+.. .
T Consensus       117 a~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~e-av~~aDIV~taT~s~-~  194 (301)
T PRK06407        117 VENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEA-ALRDADTITSITNSD-T  194 (301)
T ss_pred             CcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-C
Confidence            47899999999999999888864 56 8999999999999999887532    212233333 346789999999853 3


Q ss_pred             CCCCCCccccccccCccEE
Q 007151          455 PKVDETPIPKHALGHYALV  473 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v  473 (616)
                      |.     +..++++++..+
T Consensus       195 P~-----~~~~~l~pg~hV  208 (301)
T PRK06407        195 PI-----FNRKYLGDEYHV  208 (301)
T ss_pred             cE-----ecHHHcCCCceE
Confidence            32     455678776443

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=96.64  E-value=0.01  Score=61.72  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=73.1

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      ..+++-.||-|-||.+++..|.+.|++|+|+||+.++.+++++.-....-+..++.    +..|++|-..|-.  .+...
T Consensus        34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVa----e~sDvvitmv~~~--~~v~~  107 (327)
T KOG0409|consen   34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVA----EDSDVVITMVPNP--KDVKD  107 (327)
T ss_pred             ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHH----hhcCEEEEEcCCh--HhhHH
Confidence            46789999999999999999999999999999999999999876322222223332    3478988766632  11111


Q ss_pred             Ccccc----ccccCccEE-EEEeeCCcc--cHHHHHHHHcCCeEEc
Q 007151          460 TPIPK----HALGHYALV-FDAVYTPKI--TRLLREAEESGATIVS  498 (616)
Q Consensus       460 ~pi~~----~~l~~~~~v-~Di~Y~P~~--T~ll~~A~~~G~~~i~  498 (616)
                      ..+..    ..+++.... +|+...-+.  ..+-++++.+|+..++
T Consensus       108 v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vD  153 (327)
T KOG0409|consen  108 VLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVD  153 (327)
T ss_pred             HhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEe
Confidence            11111    122344444 798875333  3444555667887664

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.0026  Score=65.01  Aligned_cols=71  Identities=28%  Similarity=0.338  Sum_probs=48.6

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEEEcCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILANTTS  450 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divInat~  450 (616)
                      +++++|+|+ ||+|++++..|++.|++|++.+|+.++.+... .......|+.+   +...      ..+..|++||+++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP-GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC-CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            578999998 79999999999999999999999977654321 00000122221   1110      2346899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        83 ~~   84 (270)
T PRK06179         83 VG   84 (270)
T ss_pred             CC
Confidence            65

>PRK08264 short chain dehydrogenase; Validated

Probab=96.62  E-value=0.0027  Score=63.53  Aligned_cols=69  Identities=32%  Similarity=0.500  Sum_probs=49.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc--c--cchhc---cccc--CCCCccEEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH--A--LSLAD---LENF--NPEDGMILAN  447 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~--~--~~~~~---l~~~--~~~~~divIn  447 (616)
                      +.+++++|+|+ |++|++++..|.+.|+ +|+++.|+.++.++    .+..  .  .++.+   +.+.  .....|+||+
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            46789999997 8999999999999999 99999999877654    2211  1  22221   1111  2235799999


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      +++.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            9886

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.61  E-value=0.0036  Score=59.51  Aligned_cols=69  Identities=32%  Similarity=0.348  Sum_probs=49.2

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-ccc----------chhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HAL----------SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~~----------~~~~l~~~~~~~~divInat~~  451 (616)
                      +|.|+|+|..|.|+|..|++.|.+|+++.|+.+..+.+-+.-.. ...          -..|+++ ...++|++|-++|.
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~-a~~~ad~IiiavPs   79 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEE-ALEDADIIIIAVPS   79 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHH-HHTT-SEEEE-S-G
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHH-HhCcccEEEecccH
Confidence            58999999999999999999999999999999888888765321 110          0122322 34568999988885


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      -
T Consensus        80 ~   80 (157)
T PF01210_consen   80 Q   80 (157)
T ss_dssp             G
T ss_pred             H
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.0057  Score=61.52  Aligned_cols=74  Identities=30%  Similarity=0.341  Sum_probs=50.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++|+++.|+. ++.+.+++++.   ...    .++.+   +..+      ...
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            56799999998 8999999999999999999999975 34555554442   111    12221   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++|++++..
T Consensus        84 ~~d~vi~~ag~~   95 (248)
T PRK07806         84 GLDALVLNASGG   95 (248)
T ss_pred             CCcEEEECCCCC
Confidence            589999998754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.60  E-value=0.0064  Score=61.74  Aligned_cols=74  Identities=24%  Similarity=0.333  Sum_probs=49.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH--HHHHHHHHHCCcc----cchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD--RARELAETVGGHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~--ka~~la~~~~~~~----~~~~~---l~~~------~~~~  441 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+..  ..+++ ...+...    .++.+   +..+      ....
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQV-TALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            578899999998 69999999999999999988887532  12222 2222211    23222   1110      2346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        86 ~D~li~~Ag~~   96 (253)
T PRK08993         86 IDILVNNAGLI   96 (253)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.59  E-value=0.0053  Score=65.14  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=51.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHCC-c--c--cchhc---ccccCCCCccEEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGG-H--A--LSLAD---LENFNPEDGMILAN  447 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G--~~V~v~nRt~~ka~~la~~~~~-~--~--~~~~~---l~~~~~~~~divIn  447 (616)
                      +++|+++|+|+ |++|++++..|.+.|  .+|++++|+..+...+.+.+.. .  .  .++.+   +.+ ...++|+|||
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih   80 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVH   80 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEE
Confidence            35789999998 899999999999986  5899999987766666555432 1  1  13322   222 2345899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        81 ~Ag~~   85 (324)
T TIGR03589        81 AAALK   85 (324)
T ss_pred             CcccC
Confidence            98754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.59  E-value=0.0059  Score=61.45  Aligned_cols=74  Identities=26%  Similarity=0.401  Sum_probs=51.7

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCC-c
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGGHA----LSLAD---LENF------NPED-G  442 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~-~  442 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++|++. .|+.++.+.+...++...    .|+.+   +.++      .... .
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999997 799999999999999988775 557777777777664321    22221   1110      1233 8


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        83 d~li~~ag~~   92 (253)
T PRK08642         83 TTVVNNALAD   92 (253)
T ss_pred             eEEEECCCcc
Confidence            9999998753

>PRK06128 oxidoreductase; Provisional

Probab=96.58  E-value=0.005  Score=64.45  Aligned_cols=75  Identities=25%  Similarity=0.321  Sum_probs=50.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHH---CCcc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY--DRARELAETV---GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~--~ka~~la~~~---~~~~----~~~~~---l~~~------~  438 (616)
                      .+++|++||+|+ ||+|++++..|++.|++|++..|+.  .+.+++.+.+   +...    .++.+   +.++      .
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            367899999998 7999999999999999998887653  2344444433   2221    23222   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       132 ~g~iD~lV~nAg~~  145 (300)
T PRK06128        132 LGGLDILVNIAGKQ  145 (300)
T ss_pred             hCCCCEEEECCccc
Confidence            34689999999864

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.57  E-value=0.0088  Score=58.86  Aligned_cols=117  Identities=16%  Similarity=0.110  Sum_probs=69.6

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA  432 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~  432 (616)
                      -.|++.-|+.. .- .+..-+.+.+++||+|+|+|-+ -.|+-++..|.+.|+.|++++.+.-....-............
T Consensus        37 p~avi~lL~~~-~i-~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~  114 (197)
T cd01079          37 PLAIVKILEFL-GI-YNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVT  114 (197)
T ss_pred             HHHHHHHHHHh-CC-cccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccccccccccccccc
Confidence            46777777642 10 0000011247999999999997 589999999999999999995321100000000000000000


Q ss_pred             c----ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          433 D----LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       433 ~----l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      +    +.+ ...++||||.|+|.   |.   ..++.++++++.+|+|+-.+
T Consensus       115 ~~~~~l~~-~~~~ADIVIsAvG~---~~---~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         115 DEEAMTLD-CLSQSDVVITGVPS---PN---YKVPTELLKDGAICINFASI  158 (197)
T ss_pred             chhhHHHH-HhhhCCEEEEccCC---CC---CccCHHHcCCCcEEEEcCCC
Confidence            1    112 24568999998884   21   12667889999999999765

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.57  E-value=0.0045  Score=65.96  Aligned_cols=119  Identities=23%  Similarity=0.309  Sum_probs=73.0

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      +.++.||++.|+|.|.+|+++|+.++..|++|..++|++.  .+..+.++..+.+++++    +.++|+|+..+|..-..
T Consensus       141 ~~~l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~~l~el----l~~sDii~l~~Plt~~T  214 (324)
T COG1052         141 GFDLRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYVDLDEL----LAESDIISLHCPLTPET  214 (324)
T ss_pred             ccCCCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceeccHHHH----HHhCCEEEEeCCCChHH
Confidence            3578999999999999999999999988889999999864  23333333444444433    34578888777764221


Q ss_pred             CCCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                         .-.|..+.   ++++.+++.+.-.+. ++.-+-.|-+.|...--|++++
T Consensus       215 ---~hLin~~~l~~mk~ga~lVNtaRG~~VDe~ALi~AL~~g~i~gaglDV~  263 (324)
T COG1052         215 ---RHLINAEELAKMKPGAILVNTARGGLVDEQALIDALKSGKIAGAGLDVF  263 (324)
T ss_pred             ---hhhcCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHhCCcceEEeeec
Confidence               11233332   344455554444333 3444455555555555555543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.57  E-value=0.006  Score=61.30  Aligned_cols=73  Identities=21%  Similarity=0.257  Sum_probs=48.8

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETV---GGHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~~  441 (616)
                      ++|.++|+|+ ||+|++++..|++.|++|++ ..|+..+.++..+++   +...    .++.+   +.+.      ....
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 79999999999999998777 455555555554443   2111    22222   1110      1246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        82 id~li~~ag~~   92 (246)
T PRK12938         82 IDVLVNNAGIT   92 (246)
T ss_pred             CCEEEECCCCC
Confidence            89999998764

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.0033  Score=65.57  Aligned_cols=118  Identities=20%  Similarity=0.164  Sum_probs=77.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HCCcccchhcc-cccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET-VGGHALSLADL-ENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~-~~~~~~~~~~l-~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .++++|+|.|.+|++++..|.+.|..+.+++++...+...+.. ++...-...+. .. ....+|+||-++|+......-
T Consensus         3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~-~~~~aD~VivavPi~~~~~~l   81 (279)
T COG0287           3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAE-AAAEADLVIVAVPIEATEEVL   81 (279)
T ss_pred             CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhh-hcccCCEEEEeccHHHHHHHH
Confidence            3689999999999999999999999998888887665554433 43211000111 11 234589999999976432100


Q ss_pred             CCccccccccCccEEEEEeeCCcccHHHHHHHHcCC---eEEccHHHH
Q 007151          459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEESGA---TIVSGLEMF  503 (616)
Q Consensus       459 ~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~---~~i~Gl~ML  503 (616)
                      +. +.. .++++.++.|+...  .++.++++++..-   .++.|=.|+
T Consensus        82 ~~-l~~-~l~~g~iv~Dv~S~--K~~v~~a~~~~~~~~~~~vg~HPM~  125 (279)
T COG0287          82 KE-LAP-HLKKGAIVTDVGSV--KSSVVEAMEKYLPGDVRFVGGHPMF  125 (279)
T ss_pred             HH-hcc-cCCCCCEEEecccc--cHHHHHHHHHhccCCCeeEecCCCC
Confidence            00 111 46778999999764  5666777776642   588777776

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.56  E-value=0.0037  Score=69.90  Aligned_cols=110  Identities=23%  Similarity=0.255  Sum_probs=72.9

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-C-cc---cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-G-HA---LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-~-~~---~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      +.|||.|-||.+++..|++.|.+|+++||+.++.+++.+... . ..   .+.+++.+ .+.++|+|+-+.+.+-.  .+
T Consensus         2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~-~l~~~dvIil~v~~~~~--v~   78 (467)
T TIGR00873         2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQ-SLERPRKIMLMVKAGAP--VD   78 (467)
T ss_pred             EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHh-hcCCCCEEEEECCCcHH--HH
Confidence            679999999999999999999999999999999999987632 1 11   12333322 23457888888776421  11


Q ss_pred             CCcccc--ccccCccEEEEEee-CCcccH-HHHHHHHcCCeEE
Q 007151          459 ETPIPK--HALGHYALVFDAVY-TPKITR-LLREAEESGATIV  497 (616)
Q Consensus       459 ~~pi~~--~~l~~~~~v~Di~Y-~P~~T~-ll~~A~~~G~~~i  497 (616)
                      .. +..  ..+.++.+++|..- .|..|. ..++.+++|+..+
T Consensus        79 ~V-i~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fv  120 (467)
T TIGR00873        79 AV-INQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFV  120 (467)
T ss_pred             HH-HHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEE
Confidence            11 111  13567789999975 455543 3344456777655

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK08324 short chain dehydrogenase; Validated

Probab=96.56  E-value=0.0062  Score=71.41  Aligned_cols=75  Identities=36%  Similarity=0.459  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~~  441 (616)
                      .+.+|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+.+++.++.  ..    .++.+   +...      ..+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467899999996 8999999999999999999999999998888877653  11    12221   1110      1346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus       499 iDvvI~~AG~~  509 (681)
T PRK08324        499 VDIVVSNAGIA  509 (681)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK13947 shikimate kinase; Provisional

Probab=96.56  E-value=0.00088  Score=63.99  Aligned_cols=30  Identities=7%  Similarity=0.030  Sum_probs=27.7

Q ss_pred             cceecccccCCccchhchhhhhhcCceeeh
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      |++++||||+||||+|+.||+.++.+|+=+
T Consensus         3 ~I~l~G~~GsGKst~a~~La~~lg~~~id~   32 (171)
T PRK13947          3 NIVLIGFMGTGKTTVGKRVATTLSFGFIDT   32 (171)
T ss_pred             eEEEEcCCCCCHHHHHHHHHHHhCCCEEEC
Confidence            689999999999999999999999988744

>TIGR02415 23BDH acetoin reductases

Probab=96.53  E-value=0.0068  Score=61.15  Aligned_cols=71  Identities=24%  Similarity=0.332  Sum_probs=51.6

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~~di  444 (616)
                      |+++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+++..   ..    .++.+   +.++      .....|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999997 7999999999999999999999998888777665531   11    23222   1110      1345799


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus        81 vi~~ag~~   88 (254)
T TIGR02415        81 MVNNAGVA   88 (254)
T ss_pred             EEECCCcC
Confidence            99999753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.0051  Score=61.25  Aligned_cols=71  Identities=23%  Similarity=0.278  Sum_probs=49.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--ccchhcc---cc----cCCCCccEEEEcCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLADL---EN----FNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~--~~~~~~l---~~----~~~~~~divInat~~  451 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+..+..  .+++.+.   .+    +.....|+||++++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            57999997 89999999999999999999999987766553321111  1233221   11    112358999999876


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        82 ~   82 (225)
T PRK08177         82 S   82 (225)
T ss_pred             c
Confidence            4

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.53  E-value=0.0042  Score=54.87  Aligned_cols=38  Identities=26%  Similarity=0.316  Sum_probs=33.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .+++|++|+|+|+|.+|..-+..|.+.|++|+|++.+.
T Consensus         3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch
Confidence            46789999999999999999999999999999999986

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.0068  Score=61.44  Aligned_cols=75  Identities=27%  Similarity=0.358  Sum_probs=53.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~-V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .+++|+++|+|+ ||+|+.++..|.+.|++ |++++|+.++.+++.+++.   ...    .++.+   +.++      ..
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999998 79999999999999997 9999999887776665542   111    12221   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        83 g~id~li~~ag~~   95 (260)
T PRK06198         83 GRLDALVNAAGLT   95 (260)
T ss_pred             CCCCEEEECCCcC
Confidence            4589999999864

>PRK06199 ornithine cyclodeaminase; Validated

Probab=96.49  E-value=0.006  Score=66.45  Aligned_cols=91  Identities=19%  Similarity=0.210  Sum_probs=64.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHH-C-CC-eEEEEECCHHHHHHHHHHHCCc------ccchhcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA-K-GA-RVVIANRTYDRARELAETVGGH------ALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~-~-G~-~V~v~nRt~~ka~~la~~~~~~------~~~~~~l~~~~~~~~divInat~~  451 (616)
                      -+++.|+|+|..|+.-+.++.. . +. +|+|++|+.++++++++++...      ....++.++ ...++|+|+-||+.
T Consensus       155 a~~l~iiG~G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~e-av~~ADIVvtaT~s  233 (379)
T PRK06199        155 SKVVGLLGPGVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEE-VVRGSDIVTYCNSG  233 (379)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHH-HHcCCCEEEEccCC
Confidence            4789999999999999999887 3 36 8999999999999999887532      111233333 35679999999975


Q ss_pred             CCC-CCCCCCc-cccccccCccEEE
Q 007151          452 GMQ-PKVDETP-IPKHALGHYALVF  474 (616)
Q Consensus       452 gm~-p~~~~~p-i~~~~l~~~~~v~  474 (616)
                      ... |.  ..| +..++++++..+.
T Consensus       234 ~~~~~s--~~Pv~~~~~lkpG~hv~  256 (379)
T PRK06199        234 ETGDPS--TYPYVKREWVKPGAFLL  256 (379)
T ss_pred             CCCCCC--cCcEecHHHcCCCcEEe
Confidence            321 11  123 4456787776543

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.0063  Score=61.00  Aligned_cols=47  Identities=28%  Similarity=0.473  Sum_probs=42.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   50 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI   50 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence            467899999998 79999999999999999999999999888877665

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.49  E-value=0.0059  Score=64.78  Aligned_cols=113  Identities=22%  Similarity=0.232  Sum_probs=78.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.||++.|+|.|.+|+++|..+...|.+|..++|+....     ..+....+++   + .+.++|+|+.++|..  |.+
T Consensus       142 ~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~~~~l~---e-ll~~sDvv~lh~Plt--~~T  210 (311)
T PRK08410        142 EIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYERVSLE---E-LLKTSDIISIHAPLN--EKT  210 (311)
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCceeecHH---H-HhhcCCEEEEeCCCC--chh
Confidence            5789999999999999999999999999999999963211     1111222333   3 345689999999964  221


Q ss_pred             CCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       .-.|..+   .++++.+++.+.-.+. ++.-|.+|-+.|-.. -|++++
T Consensus       211 -~~li~~~~~~~Mk~~a~lIN~aRG~vVDe~AL~~AL~~g~i~-AaLDV~  258 (311)
T PRK08410        211 -KNLIAYKELKLLKDGAILINVGRGGIVNEKDLAKALDEKDIY-AGLDVL  258 (311)
T ss_pred             -hcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCeE-EEEecC
Confidence             1234444   3567788888876655 466666777777655 778864

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.48  E-value=0.005  Score=61.70  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=33.4

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus        25 ~L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4667899999999999999999999999 89999987

>PRK07985 oxidoreductase; Provisional

Probab=96.48  E-value=0.0064  Score=63.56  Aligned_cols=75  Identities=24%  Similarity=0.291  Sum_probs=50.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHH---CCcc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETV---GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt--~~ka~~la~~~---~~~~----~~~~~---l~~~------~  438 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++..|+  .++.+++.+.+   +...    .++.+   +..+      .
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999998 799999999999999999988764  34455554433   2211    23222   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus       126 ~g~id~lv~~Ag~~  139 (294)
T PRK07985        126 LGGLDIMALVAGKQ  139 (294)
T ss_pred             hCCCCEEEECCCCC
Confidence            35689999998753

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.48  E-value=0.0049  Score=65.99  Aligned_cols=117  Identities=18%  Similarity=0.126  Sum_probs=77.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHH-HHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGA-KAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L-~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.|+++.|+|.|.+|++++..| ...|++|+.++|+..+...   .. ...  ..++.+ ...++|+|+.++|..-..
T Consensus       142 ~~l~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~---~~-~~~--~~~l~e-ll~~aDvIvl~lP~t~~t  214 (332)
T PRK08605        142 RSIKDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKAA---TY-VDY--KDTIEE-AVEGADIVTLHMPATKYN  214 (332)
T ss_pred             ceeCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHhHH---hh-ccc--cCCHHH-HHHhCCEEEEeCCCCcch
Confidence            357899999999999999999999 4568899999998654211   11 111  112222 235689999999864221


Q ss_pred             CCCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                         ...+..   ..++++.+++++.-.+. +|.-+..|-+.|...--+++++
T Consensus       215 ---~~li~~~~l~~mk~gailIN~sRG~~vd~~aL~~aL~~g~i~gaalDV~  263 (332)
T PRK08605        215 ---HYLFNADLFKHFKKGAVFVNCARGSLVDTKALLDALDNGLIKGAALDTY  263 (332)
T ss_pred             ---hhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEEecc
Confidence               112322   23567789999987644 5777777777776555566654

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.47  E-value=0.0067  Score=64.23  Aligned_cols=70  Identities=26%  Similarity=0.353  Sum_probs=52.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+++|++.|+|.|-+|+++|..|...|.+|++++|. .+..+.+...+....+++++    ...+|+|+...|.
T Consensus        12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~-~~s~~~A~~~G~~v~sl~Ea----ak~ADVV~llLPd   81 (335)
T PRK13403         12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRP-GKSFEVAKADGFEVMSVSEA----VRTAQVVQMLLPD   81 (335)
T ss_pred             hhhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECc-chhhHHHHHcCCEECCHHHH----HhcCCEEEEeCCC
Confidence            3578999999999999999999999999999999986 44545555545443344332    3457888887774

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.44  E-value=0.0018  Score=68.65  Aligned_cols=117  Identities=16%  Similarity=0.094  Sum_probs=74.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+++|++.|+|.|.+|++++..|...|++|+.++|+.++.....     ......++.+ ...++|+|+.+.|..-.  +
T Consensus       133 ~l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~-----~~~~~~~l~e-~l~~aDvvv~~lPlt~~--T  204 (312)
T PRK15469        133 HREDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQ-----SFAGREELSA-FLSQTRVLINLLPNTPE--T  204 (312)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCce-----eecccccHHH-HHhcCCEEEECCCCCHH--H
Confidence            56789999999999999999999999999999999764321110     0011223333 34568999998886421  1


Q ss_pred             CCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ...+...   .++++.+++++.-.+. ++.-|.+|-+.|...--+++++
T Consensus       205 -~~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf  253 (312)
T PRK15469        205 -VGIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVF  253 (312)
T ss_pred             -HHHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCC
Confidence             1112222   3466777777776554 3555566666665444455543

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.013  Score=59.62  Aligned_cols=73  Identities=23%  Similarity=0.366  Sum_probs=50.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~~  441 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++|++++|+.+ ..+.++.+   +...    .++.+   +..+      ....
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999997 79999999999999999999999875 33333332   2111    22221   1110      2346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++|++++..
T Consensus        83 id~vi~~ag~~   93 (263)
T PRK08226         83 IDILVNNAGVC   93 (263)
T ss_pred             CCEEEECCCcC
Confidence            89999999754

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.43  E-value=0.0056  Score=64.69  Aligned_cols=113  Identities=14%  Similarity=0.097  Sum_probs=70.4

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.||++.|+|.|.+|++++..|...|++|+.++|+....       +... ...++++ ...++|+|+.+.|..-.  +
T Consensus       119 ~L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~~-------~~~~-~~~~l~e-ll~~aDiv~~~lp~t~~--T  187 (303)
T PRK06436        119 LLYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVND-------GISS-IYMEPED-IMKKSDFVLISLPLTDE--T  187 (303)
T ss_pred             CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCccc-------Cccc-ccCCHHH-HHhhCCEEEECCCCCch--h
Confidence            5789999999999999999999988999999999974321       1100 0112222 23457999998886421  1


Q ss_pred             CCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          458 DETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       458 ~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      . ..+...   .++++.+++++.-.+. ++.-+.+|-+.|...--++++
T Consensus       188 ~-~li~~~~l~~mk~ga~lIN~sRG~~vd~~aL~~aL~~g~i~~a~lDV  235 (303)
T PRK06436        188 R-GMINSKMLSLFRKGLAIINVARADVVDKNDMLNFLRNHNDKYYLSDV  235 (303)
T ss_pred             h-cCcCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCceEEEEcc
Confidence            1 123322   3456677777766543 455555565555433344444

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.42  E-value=0.011  Score=64.82  Aligned_cols=117  Identities=20%  Similarity=0.265  Sum_probs=70.1

Q ss_pred             EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEcc-----------------chhHHHHHHHHHHCCCeEEEEEC
Q 007151          350 YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       350 ~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGA-----------------GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      ---|..-++..+++.+..         .+++||+++|+|+                 |++|+++|.+|.++|++|++++|
T Consensus       166 r~~~~~~I~~~~~~~~~~---------~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~  236 (399)
T PRK05579        166 RMAEPEEIVAAAERALSP---------KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSG  236 (399)
T ss_pred             CCCCHHHHHHHHHHHhhh---------cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCC
Confidence            344556666666554431         3578999999998                 55999999999999999999988


Q ss_pred             CHHHHHHHHHHHCCcccchhccccc------CCCCccEEEEcCCCCCCCCCCCCccccccccCc--cEEEEEeeCCcc
Q 007151          413 TYDRARELAETVGGHALSLADLENF------NPEDGMILANTTSIGMQPKVDETPIPKHALGHY--ALVFDAVYTPKI  482 (616)
Q Consensus       413 t~~ka~~la~~~~~~~~~~~~l~~~------~~~~~divInat~~gm~p~~~~~pi~~~~l~~~--~~v~Di~Y~P~~  482 (616)
                      +.+ .+   ...+...+++.+..++      ..+..|++||+++++.+..  .. .....+++.  ...+++.-+|.-
T Consensus       237 ~~~-~~---~~~~~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~--~~-~~~~Kikk~~~~~~l~L~~~pdI  307 (399)
T PRK05579        237 PVN-LP---TPAGVKRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRP--AT-VAEGKIKKGEGELTLELVPNPDI  307 (399)
T ss_pred             Ccc-cc---CCCCcEEEccCCHHHHHHHHHHhcCCCCEEEEccccccccc--cc-ccccCccCCCCCceEEEEeCcHH
Confidence            652 11   0001112222221110      2456899999998763311  11 112234332  366788877654

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.013  Score=59.45  Aligned_cols=75  Identities=29%  Similarity=0.329  Sum_probs=51.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCcc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~---~~~~----~~~~~l---~~~------~~  439 (616)
                      ...+|+++|+|+ ||+|++++..|.+.|++|+++.| +.++.+++.+.+   +...    .++.+.   .++      ..
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346889999998 69999999999999998877655 566666666554   2211    232221   110      13


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+||++++..
T Consensus        86 ~~iD~vi~~ag~~   98 (258)
T PRK09134         86 GPITLLVNNASLF   98 (258)
T ss_pred             CCCCEEEECCcCC
Confidence            4579999999753

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.40  E-value=0.0058  Score=65.60  Aligned_cols=37  Identities=38%  Similarity=0.518  Sum_probs=33.8

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|+||.|..++..|+..|+ +|++++++.
T Consensus        21 ~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3567899999999999999999999999 999999863

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.0099  Score=62.05  Aligned_cols=76  Identities=24%  Similarity=0.287  Sum_probs=51.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Ccc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~---~~~----~~~~~---l~~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+. +..+.+.+.+.   .+.    .|+.+   +.++      .
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678899999998 6999999999999999999999875 33444444332   111    22221   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       122 ~~~iD~lI~~Ag~~  135 (290)
T PRK06701        122 LGRLDILVNNAAFQ  135 (290)
T ss_pred             cCCCCEEEECCccc
Confidence            24579999998764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.40  E-value=0.0051  Score=61.58  Aligned_cols=76  Identities=26%  Similarity=0.278  Sum_probs=51.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---c-c----cchh---ccccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---H-A----LSLA---DLENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~-~----~~~~---~l~~~------~~  439 (616)
                      ++.||+|+++|+ ||+|++.+.+|.++|+.+.++.-+.|..++.|+--..   . +    .++.   ++++.      ..
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            467999999986 9999999999999999666655555666666543221   1 1    1221   12110      35


Q ss_pred             CCccEEEEcCCCCC
Q 007151          440 EDGMILANTTSIGM  453 (616)
Q Consensus       440 ~~~divInat~~gm  453 (616)
                      +..|++||.+++-.
T Consensus        82 g~iDIlINgAGi~~   95 (261)
T KOG4169|consen   82 GTIDILINGAGILD   95 (261)
T ss_pred             CceEEEEccccccc
Confidence            67899999998753

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.39  E-value=0.0075  Score=61.17  Aligned_cols=70  Identities=14%  Similarity=0.208  Sum_probs=52.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCC---C-eEEEEEC-CHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKG---A-RVVIANR-TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G---~-~V~v~nR-t~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      +.++.|+|+|.+|++++..|.+.|   . ++++++| +.++++++++.++....  .+..+ ...++|+||.++|...
T Consensus         4 ~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~DiViiavp~~~   78 (245)
T PRK07634          4 KHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTT--TDWKQ-HVTSVDTIVLAMPPSA   78 (245)
T ss_pred             CCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEe--CChHH-HHhcCCEEEEecCHHH
Confidence            468999999999999999999886   3 3788888 57889998887764321  22222 2345899999999754

>PRK13949 shikimate kinase; Provisional

Probab=96.37  E-value=0.0013  Score=63.41  Aligned_cols=28  Identities=14%  Similarity=0.237  Sum_probs=26.0

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      ++++|||||+||||+++.||+.++.+++
T Consensus         3 ~I~liG~~GsGKstl~~~La~~l~~~~i   30 (169)
T PRK13949          3 RIFLVGYMGAGKTTLGKALARELGLSFI   30 (169)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHcCCCee
Confidence            5899999999999999999999998865

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.37  E-value=0.0024  Score=65.15  Aligned_cols=73  Identities=23%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divIn  447 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+..  .......++.+   +.++      .....|++||
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHE--NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467899999997 7999999999999999999999986553211  00000112211   1110      2346899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        84 ~Ag~~   88 (266)
T PRK06171         84 NAGIN   88 (266)
T ss_pred             CCccc
Confidence            98753

>PRK09135 pteridine reductase; Provisional

Probab=96.37  E-value=0.012  Score=58.82  Aligned_cols=74  Identities=24%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCC----c----ccchhccccc---------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGG----H----ALSLADLENF---------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~~----~----~~~~~~l~~~---------~~  439 (616)
                      .++++++|+|+ |++|+.++..|.+.|++|+++.|+ .++.+.+.+.+..    .    ..++.+.++.         ..
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35689999998 799999999999999999998885 4555555544321    1    1233221110         12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+||++++..
T Consensus        84 ~~~d~vi~~ag~~   96 (249)
T PRK09135         84 GRLDALVNNASSF   96 (249)
T ss_pred             CCCCEEEECCCCC
Confidence            4579999998764

>PLN02256 arogenate dehydrogenase

Probab=96.35  E-value=0.0084  Score=63.42  Aligned_cols=118  Identities=20%  Similarity=0.187  Sum_probs=75.2

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .+++++.|+|.|.+|.+++..|.+.|.+|++++|+..  .+.+..++...  ..+..+....++|+||-|+|.......-
T Consensus        34 ~~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~--~~~a~~~gv~~--~~~~~e~~~~~aDvVilavp~~~~~~vl  109 (304)
T PLN02256         34 SRKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDY--SDIAAELGVSF--FRDPDDFCEEHPDVVLLCTSILSTEAVL  109 (304)
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccH--HHHHHHcCCee--eCCHHHHhhCCCCEEEEecCHHHHHHHH
Confidence            4567899999999999999999999999999999864  34555555422  2222221113479999999965321100


Q ss_pred             CCccccccccCccEEEEEeeCCcccHHHHHHHH---cCCeEEccHHHH
Q 007151          459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMF  503 (616)
Q Consensus       459 ~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~Gl~ML  503 (616)
                       ..+....+.+..+++|+.-..  ...++..++   .+..++.+-.|.
T Consensus       110 -~~l~~~~l~~~~iviDv~SvK--~~~~~~~~~~l~~~~~~V~~HPma  154 (304)
T PLN02256        110 -RSLPLQRLKRSTLFVDVLSVK--EFPKNLLLQVLPEEFDILCTHPMF  154 (304)
T ss_pred             -HhhhhhccCCCCEEEecCCch--HHHHHHHHHhCCCCCeEEecCCCC
Confidence             011111245678999998642  334455544   356678777776

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.35  E-value=0.0082  Score=67.20  Aligned_cols=111  Identities=23%  Similarity=0.297  Sum_probs=71.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc---cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA---LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~---~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++.|+|.|-||.++|..|++.|++|+++||+.++.+++.+....   ..   .+++++.+ .+.+.|+|+-+.+.+-.  
T Consensus         3 ~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~-~l~~~d~Iil~v~~~~~--   79 (470)
T PTZ00142          3 DIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVN-SLKKPRKVILLIKAGEA--   79 (470)
T ss_pred             EEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHh-cCCCCCEEEEEeCChHH--
Confidence            68999999999999999999999999999999999998764221   11   12222221 23356877766554311  


Q ss_pred             CCCCccc--cccccCccEEEEEeeC-CcccH-HHHHHHHcCCeEE
Q 007151          457 VDETPIP--KHALGHYALVFDAVYT-PKITR-LLREAEESGATIV  497 (616)
Q Consensus       457 ~~~~pi~--~~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G~~~i  497 (616)
                      .+.. +.  ...+.++.+++|..-. |..|. ..++.+++|+..+
T Consensus        80 v~~v-i~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fl  123 (470)
T PTZ00142         80 VDET-IDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYL  123 (470)
T ss_pred             HHHH-HHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence            0110 11  1135677899999764 44443 3445567787665

>PRK07589 ornithine cyclodeaminase; Validated

Probab=96.35  E-value=0.0098  Score=63.98  Aligned_cols=95  Identities=16%  Similarity=0.187  Sum_probs=65.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCccc---chhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGHAL---SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~~~~---~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      -+++.|+|+|.-|+.-+.++... .. +|+|+||+.++++++++++....+   ..++.++ ...++|+|+-+|+.. .+
T Consensus       129 a~~l~iiGaG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~-av~~ADIIvtaT~S~-~~  206 (346)
T PRK07589        129 SRTMALIGNGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAE-AVEGADIITTVTADK-TN  206 (346)
T ss_pred             CcEEEEECCcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHH-HHhcCCEEEEecCCC-CC
Confidence            47899999999999998877654 55 899999999999999988853211   1233333 356789999999742 21


Q ss_pred             CCCCCc-cccccccCccEEEEE-eeCCc
Q 007151          456 KVDETP-IPKHALGHYALVFDA-VYTPK  481 (616)
Q Consensus       456 ~~~~~p-i~~~~l~~~~~v~Di-~Y~P~  481 (616)
                          .| +..++++++..+.-+ .|.|.
T Consensus       207 ----~Pvl~~~~lkpG~hV~aIGs~~p~  230 (346)
T PRK07589        207 ----ATILTDDMVEPGMHINAVGGDCPG  230 (346)
T ss_pred             ----CceecHHHcCCCcEEEecCCCCCC
Confidence                13 445678776653332 24453

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=96.32  E-value=0.018  Score=64.31  Aligned_cols=36  Identities=25%  Similarity=0.174  Sum_probs=32.3

Q ss_pred             cCCcEEEEEccchhHHH-HHHHHHHCCCeEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrA-ia~~L~~~G~~V~v~nRt~  414 (616)
                      .++++++|+|.|++|.+ +|..|.+.|++|++.++..
T Consensus         5 ~~~~~v~viG~G~sG~s~~a~~L~~~G~~V~~~D~~~   41 (461)
T PRK00421          5 RRIKRIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKE   41 (461)
T ss_pred             CCCCEEEEEEEchhhHHHHHHHHHhCCCeEEEECCCC
Confidence            46789999999999999 6999999999999999754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.32  E-value=0.01  Score=59.98  Aligned_cols=123  Identities=20%  Similarity=0.278  Sum_probs=75.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHHHCCccc-----chhcccccCCCCccEEEEcCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHAL-----SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l-a~~~~~~~~-----~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ++++|+|+|-.|+.+|..|.+.|.+|+++.++.+++++. ++++...++     +.+-+.+....++|.+|-+|+-.-.-
T Consensus         1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~N   80 (225)
T COG0569           1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEVN   80 (225)
T ss_pred             CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHHH
Confidence            478999999999999999999999999999999998884 445554332     22334554577899999999853110


Q ss_pred             CCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHH
Q 007151          456 KVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE  509 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~  509 (616)
                      . -.+.+....+....+ +=-+.+|.   ..+..++.|+..+---+....+.+.
T Consensus        81 ~-i~~~la~~~~gv~~v-iar~~~~~---~~~~~~~~g~~~ii~Pe~~~~~~l~  129 (225)
T COG0569          81 S-VLALLALKEFGVPRV-IARARNPE---HEKVLEKLGADVIISPEKLAAKRLA  129 (225)
T ss_pred             H-HHHHHHHHhcCCCcE-EEEecCHH---HHHHHHHcCCcEEECHHHHHHHHHH
Confidence            0 000011111222233 33333332   2344556686555555655554444

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.31  E-value=0.0059  Score=65.97  Aligned_cols=72  Identities=19%  Similarity=0.291  Sum_probs=51.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH-------------------HHHHHHHHHHCC---cc------
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGG---HA------  428 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~-------------------~ka~~la~~~~~---~~------  428 (616)
                      .+++++|+|+|+||.|..++..|+..|+ ++++++.+.                   .|++.+++.+..   ..      
T Consensus        25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            3567899999999999999999999999 999998764                   466666665532   11      


Q ss_pred             --cchhcccccCCCCccEEEEcCC
Q 007151          429 --LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       429 --~~~~~l~~~~~~~~divInat~  450 (616)
                        ++.++..+ .+.++|+||+|+-
T Consensus       105 ~~i~~~~~~~-~~~~~DvVvd~~d  127 (355)
T PRK05597        105 RRLTWSNALD-ELRDADVILDGSD  127 (355)
T ss_pred             eecCHHHHHH-HHhCCCEEEECCC
Confidence              01111112 2456899999984

>PRK12743 oxidoreductase; Provisional

Probab=96.31  E-value=0.0091  Score=60.67  Aligned_cols=72  Identities=29%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH---CCcc----cchhccc---cc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV---GGHA----LSLADLE---NF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~---~~~~----~~~~~l~---~~------~~~~~  442 (616)
                      +|+++|+|+ ||+|++++..|++.|++|+++. |+.++++++.+++   +...    .++.+.+   .+      .....
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999998 6999999999999999988875 5667776666554   2211    2332211   10      23458


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++|++++..
T Consensus        82 d~li~~ag~~   91 (256)
T PRK12743         82 DVLVNNAGAM   91 (256)
T ss_pred             CEEEECCCCC
Confidence            9999998764

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.014  Score=60.15  Aligned_cols=74  Identities=24%  Similarity=0.331  Sum_probs=53.2

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccccc---------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLENF---------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~~~---------~~~~  441 (616)
                      .+.|+++|+|+ |++|++++..|.+.|++|++..|+.++.+++.+++.   .+.    .++.+.+++         ....
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            45689999998 799999999999999999999999888777665542   211    232221110         1345


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++|++++..
T Consensus        88 id~vi~~Ag~~   98 (274)
T PRK07775         88 IEVLVSGAGDT   98 (274)
T ss_pred             CCEEEECCCcC
Confidence            79999999754

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.012  Score=58.90  Aligned_cols=74  Identities=28%  Similarity=0.361  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+ ||+|++++..|.+.|++++++.| +.++.+++.+++.   .+.    +++.+   +.++      ...
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56799999997 79999999999999998877665 4445555555442   111    22221   1110      134


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        83 ~id~vi~~ag~~   94 (245)
T PRK12937         83 RIDVLVNNAGVM   94 (245)
T ss_pred             CCCEEEECCCCC
Confidence            689999998864

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.30  E-value=0.018  Score=64.33  Aligned_cols=36  Identities=22%  Similarity=0.233  Sum_probs=33.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +.+++++|+|.|+.|++++..|.+.|++|++++++.
T Consensus        12 ~~~~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~   47 (458)
T PRK01710         12 IKNKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKS   47 (458)
T ss_pred             hcCCeEEEEcccHHHHHHHHHHHHCCCEEEEECCCC
Confidence            457899999999999999999999999999999764

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.0084  Score=60.54  Aligned_cols=46  Identities=37%  Similarity=0.498  Sum_probs=39.0

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETV  424 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~  424 (616)
                      +++++++|+|+ ||+|++++..|.+.|++|.+ ..|+.++.+++.+.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~   51 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI   51 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            56789999997 79999999999999998877 478888877776655

>PRK07574 formate dehydrogenase; Provisional

Probab=96.26  E-value=0.0072  Score=65.90  Aligned_cols=118  Identities=15%  Similarity=0.117  Sum_probs=70.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.||++.|+|.|.+|++++..|...|++|..++|+... .+..+.++.. ..+++++    ...+|+|+.+.|...  
T Consensus       188 ~~L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~-~~~~~~~g~~~~~~l~el----l~~aDvV~l~lPlt~--  260 (385)
T PRK07574        188 YDLEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLP-EEVEQELGLTYHVSFDSL----VSVCDVVTIHCPLHP--  260 (385)
T ss_pred             eecCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCc-hhhHhhcCceecCCHHHH----hhcCCEEEEcCCCCH--
Confidence            3578999999999999999999999999999999997532 2222333322 1233332    345788888888632  


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      .+ ...+..+   .++++.+++++.-.+. ++.-+.+|-+.|-..--|+++
T Consensus       261 ~T-~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV  310 (385)
T PRK07574        261 ET-EHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDV  310 (385)
T ss_pred             HH-HHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEec
Confidence            11 1113222   2355566666654433 344444454555433344443

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.25  E-value=0.021  Score=63.42  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=33.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +.+|+++|+|.|++|.+++..|++.|++|++.+++..
T Consensus         3 ~~~~~~~v~G~g~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4578999999999999999999999999999987543

>PRK13946 shikimate kinase; Provisional

Probab=96.24  E-value=0.0017  Score=63.32  Aligned_cols=34  Identities=12%  Similarity=-0.008  Sum_probs=29.6

Q ss_pred             cccceecccccCCccchhchhhhhhcCceeehhh
Q 007151          539 KFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVW  572 (616)
Q Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  572 (616)
                      +.+++++||||+||||+|+.||+.|+.+|+=+=.
T Consensus        10 ~~~I~l~G~~GsGKsti~~~LA~~Lg~~~id~D~   43 (184)
T PRK13946         10 KRTVVLVGLMGAGKSTVGRRLATMLGLPFLDADT   43 (184)
T ss_pred             CCeEEEECCCCCCHHHHHHHHHHHcCCCeECcCH
Confidence            4579999999999999999999999999874443

>PLN03139 formate dehydrogenase; Provisional

Probab=96.24  E-value=0.0063  Score=66.31  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .++.||++.|+|.|.+|++++..|...|++|..++|+....+ ..+..+....  +++++ ...++|+|+.++|.
T Consensus       195 ~~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~~~--~~l~e-ll~~sDvV~l~lPl  265 (386)
T PLN03139        195 YDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAKFE--EDLDA-MLPKCDVVVINTPL  265 (386)
T ss_pred             cCCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCceec--CCHHH-HHhhCCEEEEeCCC
Confidence            468899999999999999999999999999999999753222 2223332221  12222 23457888888875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.24  E-value=0.014  Score=58.69  Aligned_cols=72  Identities=29%  Similarity=0.318  Sum_probs=52.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc-------cc--CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE-------NF--NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~-------~~--~~~~~d  443 (616)
                      +|+++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+++.   ...    .++.+.+       ..  .....|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            368999997 799999999999999999999999988888776542   111    2332211       10  234579


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +||++++..
T Consensus        81 ~vi~~a~~~   89 (255)
T TIGR01963        81 ILVNNAGIQ   89 (255)
T ss_pred             EEEECCCCC
Confidence            999988753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.23  E-value=0.008  Score=63.35  Aligned_cols=72  Identities=18%  Similarity=0.129  Sum_probs=49.1

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Cc--c--cchhc---ccccCCCCccEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GH--A--LSLAD---LENFNPEDGMILA  446 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~--~--~~~~~---l~~~~~~~~divI  446 (616)
                      .+|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.......     ..  .  .++.+   +.+ ...+.|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL-AIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH-HHcCCCEEE
Confidence            3689999997 899999999999999999998888765544322211     01  1  12222   222 234579999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        83 h~A~~~   88 (325)
T PLN02989         83 HTASPV   88 (325)
T ss_pred             EeCCCC
Confidence            998753

>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional

Probab=96.23  E-value=0.0017  Score=74.08  Aligned_cols=32  Identities=3%  Similarity=-0.105  Sum_probs=29.0

Q ss_pred             cceecccccCCccchhchhhhhhcCceeehhh
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVWSVW  572 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  572 (616)
                      +++||||||+||||+||.||+.|+++|+=.=.
T Consensus         8 ~i~LiG~~GaGKttvg~~LA~~L~~~fiD~D~   39 (542)
T PRK14021          8 QAVIIGMMGAGKTRVGKEVAQMMRLPFADADV   39 (542)
T ss_pred             cEEEECCCCCCHHHHHHHHHHHhCCCEEEchH
Confidence            68999999999999999999999999985443

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.23  E-value=0.0087  Score=62.55  Aligned_cols=41  Identities=22%  Similarity=0.411  Sum_probs=37.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      ++|.|+|+|-+|+++|..|++.|.+|++++|++++.+++.+
T Consensus         2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   42 (288)
T PRK09260          2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ   42 (288)
T ss_pred             cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence            47999999999999999999999999999999998887654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.22  E-value=0.015  Score=59.26  Aligned_cols=35  Identities=29%  Similarity=0.412  Sum_probs=31.0

Q ss_pred             ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEEC
Q 007151          378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       378 ~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nR  412 (616)
                      .+++|+++|+|++   |+|+++|..|++.|++|++.+|
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~   40 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW   40 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence            4678999999984   8999999999999999888754

>PLN00015 protochlorophyllide reductase

Probab=96.21  E-value=0.011  Score=62.26  Aligned_cols=68  Identities=29%  Similarity=0.390  Sum_probs=50.1

Q ss_pred             EEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCC---cc----cchhccc---cc------CCCCccEEE
Q 007151          385 VVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGG---HA----LSLADLE---NF------NPEDGMILA  446 (616)
Q Consensus       385 lVlGA-GGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~---~~------~~~~~divI  446 (616)
                      +|+|+ +|+|++++.+|++.| ++|++..|+.+++++++++++.   ..    +|+.+.+   .+      .....|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            58887 799999999999999 7999999999998888877642   11    2332211   11      234689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        81 nnAG~~   86 (308)
T PLN00015         81 CNAAVY   86 (308)
T ss_pred             ECCCcC
Confidence            999863

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.21  E-value=0.012  Score=62.79  Aligned_cols=70  Identities=17%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~-~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      ..+.||++.|+|.|.+|++++..+. ..|.+|..++|.....  ....++....+++++    +.++|+|+.++|..
T Consensus       141 ~~L~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~--~~~~~~~~~~~l~el----l~~sDvv~lh~plt  211 (323)
T PRK15409        141 TDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE--AEERFNARYCDLDTL----LQESDFVCIILPLT  211 (323)
T ss_pred             CCCCCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh--hHHhcCcEecCHHHH----HHhCCEEEEeCCCC
Confidence            3578999999999999999999997 7899999998863221  112333333344332    34578888877753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.18  E-value=0.014  Score=59.21  Aligned_cols=35  Identities=31%  Similarity=0.445  Sum_probs=31.9

Q ss_pred             cCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECC
Q 007151          379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       379 l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +++|+++|+|++   |+|++++..|++.|++|+++.|+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            567899999984   79999999999999999999887

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.18  E-value=0.031  Score=52.35  Aligned_cols=72  Identities=25%  Similarity=0.348  Sum_probs=54.1

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc------c--cchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------A--LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~------~--~~~~~l~~~~~~~~divInat~~  451 (616)
                      ||.|+|+ |.+|.++++.|...+.  ++.+++++.++++..+.++..-      .  +...+.+  ...++|+||.+++.
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~--~~~~aDivvitag~   79 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYE--ALKDADIVVITAGV   79 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGG--GGTTESEEEETTST
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccccc--ccccccEEEEeccc
Confidence            6899999 9999999999999886  7999999999988888776421      0  1111122  34568999999987


Q ss_pred             CCCCC
Q 007151          452 GMQPK  456 (616)
Q Consensus       452 gm~p~  456 (616)
                      ...|.
T Consensus        80 ~~~~g   84 (141)
T PF00056_consen   80 PRKPG   84 (141)
T ss_dssp             SSSTT
T ss_pred             ccccc
Confidence            55443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.18  E-value=0.009  Score=61.90  Aligned_cols=106  Identities=17%  Similarity=0.234  Sum_probs=70.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCC--Ce-EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG--AR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G--~~-V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      ++.|+|.|.+|+.++..+.+.+  ++ +.+++|+.++++++++.++...  +++++++ ..+.|+|+.|++.....    
T Consensus         3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~--~~~~~el-l~~~DvVvi~a~~~~~~----   75 (265)
T PRK13304          3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA--CLSIDEL-VEDVDLVVECASVNAVE----   75 (265)
T ss_pred             EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee--ECCHHHH-hcCCCEEEEcCChHHHH----
Confidence            6899999999999999998764  54 7789999999999988765432  2233332 25689999999754321    


Q ss_pred             CccccccccCccEEEEEee----CC-cccHHHHHHHHcCCeE
Q 007151          460 TPIPKHALGHYALVFDAVY----TP-KITRLLREAEESGATI  496 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~Y----~P-~~T~ll~~A~~~G~~~  496 (616)
                       ++....++.+.-++.+.-    .+ ....+.+.|++.|.++
T Consensus        76 -~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l  116 (265)
T PRK13304         76 -EVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKI  116 (265)
T ss_pred             -HHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEE
Confidence             122234444444444432    11 1346777788888764

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.18  E-value=0.012  Score=63.86  Aligned_cols=37  Identities=19%  Similarity=0.401  Sum_probs=34.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ..+.||++.|+|.|.+|++++..|...|.+|..+++.
T Consensus       112 ~~L~gktvGIIG~G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        112 FSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             CCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCc
Confidence            5789999999999999999999999999999999875

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.016  Score=58.88  Aligned_cols=75  Identities=27%  Similarity=0.324  Sum_probs=49.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHHH---CCcc----cchhc---cccc-----
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETV---GGHA----LSLAD---LENF-----  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR----t~~ka~~la~~~---~~~~----~~~~~---l~~~-----  437 (616)
                      .+++|+++|+|+ ||+|++++..|.+.|++|+++.|    +.+.++++++++   +.+.    .|+.+   +.++     
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            467899999998 79999999999999998665543    344555555443   2211    23322   1110     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|++||+++..
T Consensus        85 ~~~~~id~li~~ag~~  100 (257)
T PRK12744         85 AAFGRPDIAINTVGKV  100 (257)
T ss_pred             HhhCCCCEEEECCccc
Confidence             234689999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.17  E-value=0.014  Score=64.73  Aligned_cols=75  Identities=31%  Similarity=0.375  Sum_probs=53.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHCCcc--cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETVGGHA--LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt--~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~d  443 (616)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|.  .++.++++++++...  +++.+   +..+      .....|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            457899999998 899999999999999999999883  456666666665332  23221   1110      133589


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus       287 ~vi~~AG~~  295 (450)
T PRK08261        287 IVVHNAGIT  295 (450)
T ss_pred             EEEECCCcC
Confidence            999999864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.17  E-value=0.0084  Score=60.99  Aligned_cols=74  Identities=23%  Similarity=0.229  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-CCcc--cchhc----ccccCC-CCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHA--LSLAD----LENFNP-EDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~-~~~~--~~~~~----l~~~~~-~~~divIna  448 (616)
                      +.++++++|+|| |++|++++..|.+.|++|+++.|+.++++.+.... +...  .++.+    +.+ .. ..+|+||++
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~-~~~~~~d~vi~~   92 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVE-AIGDDSDAVICA   92 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHH-HhhcCCCEEEEC
Confidence            456789999997 89999999999999999999999988876553321 1111  23322    111 23 468999998


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        93 ~g~~   96 (251)
T PLN00141         93 TGFR   96 (251)
T ss_pred             CCCC
Confidence            7753

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=96.16  E-value=0.014  Score=58.83  Aligned_cols=75  Identities=37%  Similarity=0.507  Sum_probs=50.8

Q ss_pred             cCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHH--HHHHHHHHC----Ccc----cchhc-cc---cc------
Q 007151          379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR--ARELAETVG----GHA----LSLAD-LE---NF------  437 (616)
Q Consensus       379 l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~k--a~~la~~~~----~~~----~~~~~-l~---~~------  437 (616)
                      +.+|.++|+|++ |+|+++|..|++.|++|+++.|+.+.  ++.+.+...    ...    .++.+ ..   .+      
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            468999999995 99999999999999998888776543  444443333    111    23332 11   10      


Q ss_pred             CCCCccEEEEcCCCCC
Q 007151          438 NPEDGMILANTTSIGM  453 (616)
Q Consensus       438 ~~~~~divInat~~gm  453 (616)
                      ..+..|++||+++.+.
T Consensus        83 ~~g~id~lvnnAg~~~   98 (251)
T COG1028          83 EFGRIDILVNNAGIAG   98 (251)
T ss_pred             HcCCCCEEEECCCCCC
Confidence            2455899999999764

>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related

Probab=96.15  E-value=0.1  Score=53.55  Aligned_cols=137  Identities=19%  Similarity=0.204  Sum_probs=82.8

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE--------ECC---HHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA--------NRT---YDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~--------nRt---~~ka~~la~  422 (616)
                      +.|+..+++..+....      ..+++++++.|-|.|.+|+.++..|.+.|++|+.+        +.+   .+...++.+
T Consensus        11 g~GV~~~~~~~~~~~~------~~~l~g~~v~IqGfG~VG~~~a~~l~~~Ga~vv~vsD~~G~i~~~~Gld~~~l~~~~~   84 (244)
T PF00208_consen   11 GYGVAYAIEAALEHLG------GDSLEGKRVAIQGFGNVGSHAARFLAELGAKVVAVSDSSGAIYDPDGLDVEELLRIKE   84 (244)
T ss_dssp             HHHHHHHHHHHHHHTT------CHSSTTCEEEEEESSHHHHHHHHHHHHTTEEEEEEEESSEEEEETTEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcC------CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCceEEEcCCCchHHHHHHHHH
Confidence            5788888876655311      13588999999999999999999999999976544        443   344444444


Q ss_pred             HHCCcccchh-----c---cc---ccCCCCccEEEEcCCCCCCCCCCCCcccccccc-CccEEEEEeeCCcccHHHHHHH
Q 007151          423 TVGGHALSLA-----D---LE---NFNPEDGMILANTTSIGMQPKVDETPIPKHALG-HYALVFDAVYTPKITRLLREAE  490 (616)
Q Consensus       423 ~~~~~~~~~~-----~---l~---~~~~~~~divInat~~gm~p~~~~~pi~~~~l~-~~~~v~Di~Y~P~~T~ll~~A~  490 (616)
                      +.+.....+.     .   ++   ++...++|++|-|+--+..   +...++. .++ ..+++++-..+|-...-.+.-+
T Consensus        85 ~~~~~v~~~~~~~~~~~~~~~~~~~il~~~~DiliP~A~~~~I---~~~~~~~-~i~~~akiIvegAN~p~t~~a~~~L~  160 (244)
T PF00208_consen   85 ERGSRVDDYPLESPDGAEYIPNDDEILSVDCDILIPCALGNVI---NEDNAPS-LIKSGAKIIVEGANGPLTPEADEILR  160 (244)
T ss_dssp             HHSSHSTTGTHTCSSTSEEECHHCHGGTSSSSEEEEESSSTSB---SCHHHCH-CHHTT-SEEEESSSSSBSHHHHHHHH
T ss_pred             HhCCcccccccccccceeEeccccccccccccEEEEcCCCCee---CHHHHHH-HHhccCcEEEeCcchhccHHHHHHHH
Confidence            5554221221     0   11   1112368999988543321   2111210 222 3589999998887555455556


Q ss_pred             HcCCeEEccH
Q 007151          491 ESGATIVSGL  500 (616)
Q Consensus       491 ~~G~~~i~Gl  500 (616)
                      ++|+.+++..
T Consensus       161 ~rGI~viPD~  170 (244)
T PF00208_consen  161 ERGILVIPDF  170 (244)
T ss_dssp             HTT-EEE-HH
T ss_pred             HCCCEEEcch
Confidence            8999888643

They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.15  E-value=0.0098  Score=57.73  Aligned_cols=32  Identities=22%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      +|+|+|+||+|..++..|+..|+ ++++++++.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            48999999999999999999999 899999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed

Probab=96.14  E-value=0.0043  Score=65.72  Aligned_cols=34  Identities=15%  Similarity=0.018  Sum_probs=30.2

Q ss_pred             hcccccceecccccCCccchhchhhhhhcCceee
Q 007151          536 SFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +...-+++++||||+||||+|+.||+.++.+|+=
T Consensus       130 ~~~~~~I~l~G~~GsGKStvg~~La~~Lg~~~id  163 (309)
T PRK08154        130 AARRRRIALIGLRGAGKSTLGRMLAARLGVPFVE  163 (309)
T ss_pred             ccCCCEEEEECCCCCCHHHHHHHHHHHcCCCEEe
Confidence            3455679999999999999999999999999884

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.0049  Score=61.50  Aligned_cols=70  Identities=30%  Similarity=0.279  Sum_probs=47.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc----ccccCCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD----LENFNPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~----l~~~~~~~~divInat~~  451 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+....  ...+......++.+    +.+ .....|++||+++.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~D~~~~~~~~~~-~~~~id~lv~~ag~   77 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--LSGNFHFLQLDLSDDLEPLFD-WVPSVDILCNTAGI   77 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--cCCcEEEEECChHHHHHHHHH-hhCCCCEEEECCCC
Confidence            56899999998 7999999999999999999999975431  11111111122221    111 23568999999874

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.14  E-value=0.01  Score=60.67  Aligned_cols=39  Identities=21%  Similarity=0.271  Sum_probs=34.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRA  417 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka  417 (616)
                      +++++|+|+|+||+|..++..|+..|+ ++++++++.-..
T Consensus        22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~   61 (240)
T TIGR02355        22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSL   61 (240)
T ss_pred             HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence            567899999999999999999999999 999998865433

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.12  E-value=0.013  Score=62.45  Aligned_cols=90  Identities=23%  Similarity=0.121  Sum_probs=60.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-------CCc----ccchhcccccCCCCccEEEEcCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-------GGH----ALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~-------~~~----~~~~~~l~~~~~~~~divInat~  450 (616)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+..       +..    ....++..+ ....+|+||-+++
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e-~~~~aD~Vi~~v~   83 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEE-ALAGADFAVVAVP   83 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHH-HHcCCCEEEEECc
Confidence            4799999999999999999999999999999999888887542       100    111122222 2346899999888


Q ss_pred             CCCCCCCCCCccccccccCccEEEEEee
Q 007151          451 IGMQPKVDETPIPKHALGHYALVFDAVY  478 (616)
Q Consensus       451 ~gm~p~~~~~pi~~~~l~~~~~v~Di~Y  478 (616)
                      ....   .  .+. ..+.+..+++++.-
T Consensus        84 ~~~~---~--~v~-~~l~~~~~vi~~~~  105 (328)
T PRK14618         84 SKAL---R--ETL-AGLPRALGYVSCAK  105 (328)
T ss_pred             hHHH---H--HHH-HhcCcCCEEEEEee
Confidence            5421   1  010 12445567777765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.12  E-value=0.0034  Score=60.26  Aligned_cols=65  Identities=23%  Similarity=0.266  Sum_probs=48.4

Q ss_pred             EEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCC
Q 007151          384 FVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       384 vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      |+|+|| |.+|+.++..|.+.|++|+++.|++++.++   ..+.+.  .++.+   +.+ .+.++|.||++.+.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~-al~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKA-ALKGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHH-HHTTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhh-hhhhcchhhhhhhhh
Confidence            689998 899999999999999999999999998777   111121  23333   222 345789999998643

...

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=96.12  E-value=0.014  Score=66.40  Aligned_cols=69  Identities=28%  Similarity=0.333  Sum_probs=48.2

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .+.||++.|+|.|.+|++++..|...|++|+.++|+....  .+...+....+++++    ..++|+|+.++|..
T Consensus       137 ~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~--~~~~~g~~~~~l~el----l~~aDiV~l~lP~t  205 (526)
T PRK13581        137 ELYGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISPE--RAAQLGVELVSLDEL----LARADFITLHTPLT  205 (526)
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCCEEEcHHHH----HhhCCEEEEccCCC
Confidence            5789999999999999999999999999999999853221  122233332233322    33467777777753

>PRK03839 putative kinase; Provisional

Probab=96.11  E-value=0.0022  Score=62.06  Aligned_cols=28  Identities=18%  Similarity=0.052  Sum_probs=25.8

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      .++++||||+||||+++.||+.++-+++
T Consensus         2 ~I~l~G~pGsGKsT~~~~La~~~~~~~i   29 (180)
T PRK03839          2 IIAITGTPGVGKTTVSKLLAEKLGYEYV   29 (180)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence            4789999999999999999999988875

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.09  E-value=0.015  Score=58.05  Aligned_cols=46  Identities=37%  Similarity=0.583  Sum_probs=40.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      +++|+++|+|+ |++|.+++..|.+.|++|++++|+.++.+.+.+.+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL   49 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            56899999998 68999999999999999999999999888776554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.09  E-value=0.016  Score=57.82  Aligned_cols=71  Identities=21%  Similarity=0.281  Sum_probs=48.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHCC---c--c--cchhc---cccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG---H--A--LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~~---~--~--~~~~~---l~~~------~~~~~d  443 (616)
                      |.++|+|+ ||+|+.++..|++.|++|+++.| +.++.+++.++...   +  .  .++.+   +..+      .....|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            57999997 79999999999999999888877 76666665544321   1  1  12221   1110      234589


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +||++++..
T Consensus        81 ~vi~~ag~~   89 (242)
T TIGR01829        81 VLVNNAGIT   89 (242)
T ss_pred             EEEECCCCC
Confidence            999998754

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.08  E-value=0.0098  Score=64.60  Aligned_cols=35  Identities=26%  Similarity=0.428  Sum_probs=32.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      +++++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus        39 l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            567899999999999999999999999 99999876

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.07  E-value=0.016  Score=60.58  Aligned_cols=40  Identities=25%  Similarity=0.309  Sum_probs=35.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  421 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la  421 (616)
                      ++|.|+|+|-+|.++|..|+..|.+|++++|+.++.++..
T Consensus         4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (287)
T PRK08293          4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAK   43 (287)
T ss_pred             cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            5799999999999999999999999999999987666553

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.06  E-value=0.012  Score=60.35  Aligned_cols=102  Identities=14%  Similarity=0.094  Sum_probs=67.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHC-Cccc-chhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVG-GHAL-SLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~---~V~v~nRt~~ka~~la~~~~-~~~~-~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      ++.|+|+|-+|++++..|.+.|.   .+.+++|+.++++++++.++ .... +..++    ..++|+|+-+++...... 
T Consensus         2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~----~~~aDvVilav~p~~~~~-   76 (258)
T PRK06476          2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAV----VDRSDVVFLAVRPQIAEE-   76 (258)
T ss_pred             eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHH----HHhCCEEEEEeCHHHHHH-
Confidence            58999999999999999999884   47899999999999988764 2221 22222    234799999988432110 


Q ss_pred             CCCccccccccCccEEEEEeeCCcccHHHHHHHHcC
Q 007151          458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESG  493 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G  493 (616)
                         -+....+.++.+++++. .+.....++...+.+
T Consensus        77 ---vl~~l~~~~~~~vis~~-ag~~~~~l~~~~~~~  108 (258)
T PRK06476         77 ---VLRALRFRPGQTVISVI-AATDRAALLEWIGHD  108 (258)
T ss_pred             ---HHHHhccCCCCEEEEEC-CCCCHHHHHHHhCCC
Confidence               01111234567788866 455555666555443

>PRK07069 short chain dehydrogenase; Validated

Probab=96.05  E-value=0.014  Score=58.71  Aligned_cols=70  Identities=21%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCCc---------ccchhccccc---------CCCCc
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGGH---------ALSLADLENF---------NPEDG  442 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~~~---------~~~~~~l~~~---------~~~~~  442 (616)
                      +++|+|+ ||+|++++..|.+.|++|++++|+ .++.+++.+++...         ..++.+.+++         .....
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            3799997 799999999999999999999998 77777776655311         1122221110         23457


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        81 d~vi~~ag~~   90 (251)
T PRK07069         81 SVLVNNAGVG   90 (251)
T ss_pred             cEEEECCCcC
Confidence            9999998754

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.016  Score=57.53  Aligned_cols=68  Identities=34%  Similarity=0.457  Sum_probs=49.5

Q ss_pred             EEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Cc--c--cchhc---cccc--CCCCccEEEEcCCCC
Q 007151          385 VVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GH--A--LSLAD---LENF--NPEDGMILANTTSIG  452 (616)
Q Consensus       385 lVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~--~~--~--~~~~~---l~~~--~~~~~divInat~~g  452 (616)
                      +|+|+ ||+|++++..|++.|++|++++|+.++++.+.+.+.  ..  .  .++.+   +...  .....|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            58887 799999999999999999999999988888776652  11  1  23322   1111  234579999999864

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.05  E-value=0.011  Score=62.94  Aligned_cols=112  Identities=21%  Similarity=0.165  Sum_probs=68.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.||++.|+|.|.+|+++|..|...|++|..++|.... .      .....++++    .+.++|+|+.++|...  .+
T Consensus       145 ~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~-~------~~~~~~l~e----ll~~sDiv~l~lPlt~--~T  211 (317)
T PRK06487        145 ELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRP-A------RPDRLPLDE----LLPQVDALTLHCPLTE--HT  211 (317)
T ss_pred             ccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCc-c------cccccCHHH----HHHhCCEEEECCCCCh--HH
Confidence            578999999999999999999999999999999986321 0      011123333    2345788888888632  11


Q ss_pred             CCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       .-.|..+   .++++.+++.+.-.+. ++.-|.+|-+.|-..--|++++
T Consensus       212 -~~li~~~~~~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf  260 (317)
T PRK06487        212 -RHLIGARELALMKPGALLINTARGGLVDEQALADALRSGHLGGAATDVL  260 (317)
T ss_pred             -hcCcCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecC
Confidence             1123333   2455666666654443 2444445555554444455543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.04  E-value=0.018  Score=59.02  Aligned_cols=71  Identities=27%  Similarity=0.270  Sum_probs=49.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHCC----cc----cchhccc-------cc------C
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVGG----HA----LSLADLE-------NF------N  438 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~~----~~----~~~~~l~-------~~------~  438 (616)
                      +.++|+|+ ||+|++++..|.+.|++|++.. |+.++++++++++..    ..    .++.+.+       +.      .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47899998 6999999999999999998865 466777777766531    11    2332221       00      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        82 ~g~iD~lv~nAG~~   95 (267)
T TIGR02685        82 FGRCDVLVNNASAF   95 (267)
T ss_pred             cCCceEEEECCccC
Confidence            34689999999864

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.019  Score=57.51  Aligned_cols=74  Identities=27%  Similarity=0.407  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC----CHHHHHHHHHHHC---Ccc----cchhcc---ccc------
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR----TYDRARELAETVG---GHA----LSLADL---ENF------  437 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR----t~~ka~~la~~~~---~~~----~~~~~l---~~~------  437 (616)
                      +++++++|+|+ ||+|++++..|++.|++|++++|    +.++.+++.+++.   ...    .++.+.   ...      
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999998 79999999999999999888655    4555555555442   111    222221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|.||++++..
T Consensus        84 ~~~~~d~vi~~ag~~   98 (249)
T PRK12827         84 EFGRLDILVNNAGIA   98 (249)
T ss_pred             HhCCCCEEEECCCCC
Confidence            124589999999764

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.015  Score=57.72  Aligned_cols=70  Identities=24%  Similarity=0.347  Sum_probs=49.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccc----cCCCCccEEEEcCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LEN----FNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~----~~~~~~divInat~~  451 (616)
                      |+++|+|+ |++|++++..|.+.|++|+++.|+.++.+++... +...  .++.+   +..    +.....|++|++++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL-GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            57999997 7999999999999999999999998887776542 2221  22221   111    112358999999875


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        81 ~   81 (222)
T PRK06953         81 Y   81 (222)
T ss_pred             c
Confidence            3

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.01  E-value=0.015  Score=60.78  Aligned_cols=106  Identities=21%  Similarity=0.197  Sum_probs=70.1

Q ss_pred             EEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC-----
Q 007151          386 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET-----  460 (616)
Q Consensus       386 VlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~-----  460 (616)
                      ++|.|-+|.+++..|.+.|.+|+++||+.++.+.+.+. +....  .+..+ ...++|+||-+.|....  ....     
T Consensus         1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~--~s~~~-~~~~advVil~vp~~~~--~~~v~~g~~   74 (288)
T TIGR01692         1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA-GAQAA--ASPAE-AAEGADRVITMLPAGQH--VISVYSGDE   74 (288)
T ss_pred             CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc-CCeec--CCHHH-HHhcCCEEEEeCCChHH--HHHHHcCcc
Confidence            57999999999999999999999999999998887653 32211  11112 23457999999885321  0100     


Q ss_pred             ccccccccCccEEEEEeeCCcc-cHH-HHHHHHcCCeEEc
Q 007151          461 PIPKHALGHYALVFDAVYTPKI-TRL-LREAEESGATIVS  498 (616)
Q Consensus       461 pi~~~~l~~~~~v~Di~Y~P~~-T~l-l~~A~~~G~~~i~  498 (616)
                      .+. ..+.++.+++|+...... +.. -+.++++|+.+++
T Consensus        75 ~l~-~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vd  113 (288)
T TIGR01692        75 GIL-PKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMD  113 (288)
T ss_pred             hHh-hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEE
Confidence            011 134567899999975443 333 3445568888877

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.00  E-value=0.017  Score=57.87  Aligned_cols=71  Identities=24%  Similarity=0.338  Sum_probs=49.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      |+++|+|+ |++|++++..|.+.|++|++ +.|+.++.+++..++.   ...    .++.+   +.++      .....|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            57999998 79999999999999998876 5788887777665542   111    22221   1110      235679


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        82 ~vi~~ag~~   90 (247)
T PRK09730         82 ALVNNAGIL   90 (247)
T ss_pred             EEEECCCCC
Confidence            999999864

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.97  E-value=0.024  Score=60.72  Aligned_cols=71  Identities=20%  Similarity=0.274  Sum_probs=51.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHHHCCcccchhc--ccc-cCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGGHALSLAD--LEN-FNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nR---t~~ka~~la~~~~~~~~~~~~--l~~-~~~~~~divInat~~  451 (616)
                      .+++|+|+|+|++|..++..+...|++|++++|   +.++. +++++++...++..+  ..+ .....+|++|++++.
T Consensus       172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~  248 (355)
T cd08230         172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGV  248 (355)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCC
Confidence            578999999999999999999999999999998   45554 467778765433221  100 012358999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.96  E-value=0.02  Score=60.06  Aligned_cols=38  Identities=26%  Similarity=0.327  Sum_probs=35.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE  419 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~  419 (616)
                      ++|.|+|+|-||+.+|..++..|++|++++++++..+.
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            47999999999999999999999999999999988766

>PLN02712 arogenate dehydrogenase

Probab=95.96  E-value=0.0085  Score=69.87  Aligned_cols=120  Identities=20%  Similarity=0.180  Sum_probs=73.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .++.++++.|||.|.+|++++.+|.+.|.+|++++|+...  +.+.+++...  ..+..++....+|+||-|+|......
T Consensus       365 ~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~--~~a~~~Gv~~--~~~~~el~~~~aDvVILavP~~~~~~  440 (667)
T PLN02712        365 NDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS--DEAQKLGVSY--FSDADDLCEEHPEVILLCTSILSTEK  440 (667)
T ss_pred             CCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH--HHHHHcCCeE--eCCHHHHHhcCCCEEEECCChHHHHH
Confidence            3467789999999999999999999999999999998543  2344454322  12222211124799999999643211


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHH---HcCCeEEccHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAE---ESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~---~~G~~~i~Gl~ML  503 (616)
                      .- ..+....++++.+++|+.-..  +..++.++   ..|..++.+-.|.
T Consensus       441 vi-~~l~~~~lk~g~ivvDv~SvK--~~~~~~~~~~l~~~~~~v~~HPm~  487 (667)
T PLN02712        441 VL-KSLPFQRLKRSTLFVDVLSVK--EFPRNLFLQHLPQDFDILCTHPMF  487 (667)
T ss_pred             HH-HHHHHhcCCCCcEEEECCCcc--HHHHHHHHHhccCCCceEeeCCCC
Confidence            00 001111345678999997643  22233333   3456666544444

>PRK00131 aroK shikimate kinase; Reviewed

Probab=95.95  E-value=0.0031  Score=59.95  Aligned_cols=32  Identities=9%  Similarity=0.107  Sum_probs=28.3

Q ss_pred             cccccceecccccCCccchhchhhhhhcCcee
Q 007151          537 FNKFHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      .+...++++|+||+||||+++.||+.++.+++
T Consensus         2 ~~~~~i~l~G~~GsGKstla~~La~~l~~~~~   33 (175)
T PRK00131          2 LKGPNIVLIGFMGAGKSTIGRLLAKRLGYDFI   33 (175)
T ss_pred             CCCCeEEEEcCCCCCHHHHHHHHHHHhCCCEE
Confidence            34557899999999999999999999998776

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=95.93  E-value=0.021  Score=57.36  Aligned_cols=74  Identities=30%  Similarity=0.454  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++. .|+.++.+++.+++..   +.    +++.+   +.++      ...
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56899999997 799999999999999987764 4566766666555421   11    22221   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+||++++..
T Consensus        84 ~id~vi~~ag~~   95 (247)
T PRK12935         84 KVDILVNNAGIT   95 (247)
T ss_pred             CCCEEEECCCCC
Confidence            579999998764

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=95.93  E-value=0.013  Score=63.71  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ..+.||++.|+|.|.+|+.++..|...|++|.++++..
T Consensus       112 ~~l~gktvGIIG~G~IG~~va~~l~a~G~~V~~~Dp~~  149 (381)
T PRK00257        112 VDLAERTYGVVGAGHVGGRLVRVLRGLGWKVLVCDPPR  149 (381)
T ss_pred             CCcCcCEEEEECCCHHHHHHHHHHHHCCCEEEEECCcc
Confidence            46889999999999999999999999999999999754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.90  E-value=0.023  Score=57.32  Aligned_cols=72  Identities=22%  Similarity=0.271  Sum_probs=48.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Ccc----cchhcc---ccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~---~~~----~~~~~l---~~~------~~~~~  442 (616)
                      +|+++|+|+ |++|++++..|++.|++|++++|+. +..++..+.+.   ...    .++.+.   .++      .....
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            368999998 7999999999999999999998863 44444444432   111    222221   110      23468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++|++++..
T Consensus        82 d~vi~~ag~~   91 (256)
T PRK12745         82 DCLVNNAGVG   91 (256)
T ss_pred             CEEEECCccC
Confidence            9999998754

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.89  E-value=0.013  Score=62.34  Aligned_cols=114  Identities=17%  Similarity=0.195  Sum_probs=72.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|++++..+...|++|..++|....      .......++++    .+.++|+|+.++|..  |.
T Consensus       143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~~~~l~e----ll~~sDiv~l~~Plt--~~  210 (314)
T PRK06932        143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREGYTPFEE----VLKQADIVTLHCPLT--ET  210 (314)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccccCCHHH----HHHhCCEEEEcCCCC--hH
Confidence            3578999999999999999999999999999999886321      11111223333    234589999998864  21


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ..-.+..+   .++++.+++.+.-.+. ++.-|.+|-+.|...--+++++
T Consensus       211 -T~~li~~~~l~~mk~ga~lIN~aRG~~Vde~AL~~aL~~g~i~gAaLDV~  260 (314)
T PRK06932        211 -TQNLINAETLALMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVL  260 (314)
T ss_pred             -HhcccCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHcCCccEEEEecC
Confidence             11224433   3466777777765544 3444555666665444455543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.89  E-value=0.013  Score=62.58  Aligned_cols=73  Identities=21%  Similarity=0.108  Sum_probs=48.8

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--Ccc----cchhc---cccc-CCCCccEEEEc
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--GHA----LSLAD---LENF-NPEDGMILANT  448 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~--~~~----~~~~~---l~~~-~~~~~divIna  448 (616)
                      +||+++|+|+ |++|++++..|.+.|++|++++|+..........++  ...    .++.+   +.++ ...++|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            5789999997 889999999999999999999997665444332221  111    12222   2221 11246999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        83 A~~~   86 (349)
T TIGR02622        83 AAQP   86 (349)
T ss_pred             Cccc
Confidence            8743

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.89  E-value=0.017  Score=60.50  Aligned_cols=40  Identities=30%  Similarity=0.331  Sum_probs=36.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  421 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la  421 (616)
                      +++.|+|+|.+|.+++..|+..|.+|++++|+.++.+...
T Consensus         5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (292)
T PRK07530          5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGL   44 (292)
T ss_pred             CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            6899999999999999999999999999999998876644

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.89  E-value=0.022  Score=64.82  Aligned_cols=71  Identities=30%  Similarity=0.343  Sum_probs=47.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|....  +.+.+++....  +++.+ ...++|+|+.++|..
T Consensus       134 ~~l~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~--~~l~e-ll~~aDvV~l~lPlt  204 (525)
T TIGR01327       134 TELYGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP--ERAEQLGVELV--DDLDE-LLARADFITVHTPLT  204 (525)
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEc--CCHHH-HHhhCCEEEEccCCC
Confidence            3578999999999999999999999999999999985221  11223332221  12222 233467777777653

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.89  E-value=0.029  Score=59.75  Aligned_cols=71  Identities=21%  Similarity=0.275  Sum_probs=52.1

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhc--cccc--CCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLAD--LENF--NPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~--l~~~--~~~~~divInat~~  451 (616)
                      .+++|+|+|+|++|.+++..+...|+ +|++++|+.++.+ ++.+++... ++..+  +.+.  ....+|+++++++.
T Consensus       169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~  245 (343)
T PRK09880        169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS-LAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH-HHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCC
Confidence            57899999999999999999999999 7999999988865 566677543 22211  1110  12348999999874

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.88  E-value=0.025  Score=56.65  Aligned_cols=74  Identities=19%  Similarity=0.251  Sum_probs=50.6

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+++||+|+|+|+|..|..=+..|.+.|++|+|++.+. +....++++.+..... .....-....++++|-||+
T Consensus         7 ~~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~~~~~~~~~lviaAt~   81 (210)
T COG1648           7 FLDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE-REFDAEDLDDAFLVIAATD   81 (210)
T ss_pred             EEEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh-cccChhhhcCceEEEEeCC
Confidence            357899999999999999999999999999999999877 5555555544321211 1110001223677777765

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.88  E-value=0.02  Score=55.85  Aligned_cols=40  Identities=25%  Similarity=0.328  Sum_probs=33.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      +|.|+|+|-||+++|..++..|++|++++++.+..++..+
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~   40 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARK   40 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence            5889999999999999999999999999999887665543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.87  E-value=0.017  Score=57.45  Aligned_cols=93  Identities=24%  Similarity=0.319  Sum_probs=58.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++.|+|+|-+|.+++..|++.|++|.|.+|+.+ +.+.+++.++......+ ..+ .....|+|+-|.|....|..-..
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~-~~d-A~~~aDVVvLAVP~~a~~~v~~~   79 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGS-NED-AAALADVVVLAVPFEAIPDVLAE   79 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCC-hHH-HHhcCCEEEEeccHHHHHhHHHH
Confidence            5789999999999999999999999999977555 45555566554321111 111 23447888888885433221000


Q ss_pred             ccccccccCccEEEEEeeCC
Q 007151          461 PIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       461 pi~~~~l~~~~~v~Di~Y~P  480 (616)
                       + .+.+. +++|+|.. +|
T Consensus        80 -l-~~~~~-~KIvID~t-np   95 (211)
T COG2085          80 -L-RDALG-GKIVIDAT-NP   95 (211)
T ss_pred             -H-HHHhC-CeEEEecC-CC
Confidence             0 01122 57888876 55

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.87  E-value=0.026  Score=56.24  Aligned_cols=74  Identities=36%  Similarity=0.465  Sum_probs=49.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc----cchhccc---cc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLADLE---NF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~---~~~----~~~~~l~---~~------~~~  440 (616)
                      +++|+++|+|+ |++|++++..|.+.|++|++..|+.+ +.+.+.+.+.   ...    .++.+.+   ..      ...
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999998 89999999999999999988777654 3445544432   111    1222111   10      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|.||++++..
T Consensus        83 ~id~vi~~ag~~   94 (248)
T PRK05557         83 GVDILVNNAGIT   94 (248)
T ss_pred             CCCEEEECCCcC
Confidence            579999998764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.87  E-value=0.011  Score=59.58  Aligned_cols=37  Identities=32%  Similarity=0.482  Sum_probs=34.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ++++|+++|+|+ |++|++++..|.+.|++|++++|+.
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            577899999998 6899999999999999999999986

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.86  E-value=0.017  Score=60.91  Aligned_cols=92  Identities=22%  Similarity=0.184  Sum_probs=59.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c----------ccchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H----------ALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~----------~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.++.+++.+.... .          .....+..+ ....+|+||-+++.
T Consensus         3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi~~v~~   81 (325)
T PRK00094          3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAE-ALADADLILVAVPS   81 (325)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHH-HHhCCCEEEEeCCH
Confidence            68999999999999999999999999999999998888764210 0          000112221 23457999999885


Q ss_pred             CCCCCCCCCccccccccCccEEEEEe
Q 007151          452 GMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       452 gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      ......- ..+. ..+.+..+++++.
T Consensus        82 ~~~~~v~-~~l~-~~~~~~~~vi~~~  105 (325)
T PRK00094         82 QALREVL-KQLK-PLLPPDAPIVWAT  105 (325)
T ss_pred             HHHHHHH-HHHH-hhcCCCCEEEEEe
Confidence            3111000 0011 1234567788885

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.86  E-value=0.014  Score=62.22  Aligned_cols=37  Identities=38%  Similarity=0.471  Sum_probs=34.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ..+.||++.|+|.|.+|+.++..+...|.+|..++|.
T Consensus       138 ~el~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~  174 (324)
T COG0111         138 TELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPY  174 (324)
T ss_pred             ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence            4678999999999999999999999999999999994

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.85  E-value=0.021  Score=60.89  Aligned_cols=69  Identities=35%  Similarity=0.490  Sum_probs=52.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh--c-ccccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--D-LENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~--~-l~~~~~~~~divInat~  450 (616)
                      .|++|+|+|+||.|..+++.+...|++|+.++|+.+|. ++|.+++... ++..  + .+. ..+.+|++|++++
T Consensus       166 pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~-~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEA-VKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHH-hHhhCcEEEECCC
Confidence            48999999999999999999999999999999998884 5567777543 2321  1 111 1123899999999

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=95.84  E-value=0.041  Score=58.77  Aligned_cols=114  Identities=18%  Similarity=0.178  Sum_probs=78.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      -+.+.|+|+|..|+.-+.++... +. +|.|++|+++.+++++..+...    +...++.++ ...++|+|+-||+.- .
T Consensus       130 a~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~-av~~aDiIvt~T~s~-~  207 (330)
T COG2423         130 ASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEE-AVEGADIVVTATPST-E  207 (330)
T ss_pred             CcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHH-HhhcCCEEEEecCCC-C
Confidence            36899999999999999999875 66 8999999999999999776543    223334333 456799999999953 2


Q ss_pred             CCCCCCccccccccCccEEEEEe-eCCcccHHHHHHHHcC-CeEEccHH
Q 007151          455 PKVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESG-ATIVSGLE  501 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~-Y~P~~T~ll~~A~~~G-~~~i~Gl~  501 (616)
                      |.     +..++++++..+-=+- +.|..+.+-.+.-++. +.+++-++
T Consensus       208 Pi-----l~~~~l~~G~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~  251 (330)
T COG2423         208 PV-----LKAEWLKPGTHINAIGADAPGKRELDPEVLARADRVVVDSLE  251 (330)
T ss_pred             Ce-----ecHhhcCCCcEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence            22     4456787765543333 2355555444444443 66676655

>PLN02712 arogenate dehydrogenase

Probab=95.84  E-value=0.017  Score=67.42  Aligned_cols=118  Identities=19%  Similarity=0.180  Sum_probs=74.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      -+.+++.|||.|.+|++++.+|.+.|.+|++++|+..+  +.+.+++...  ..+..++...++|+||-|+|.......-
T Consensus        50 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~--~~A~~~Gv~~--~~d~~e~~~~~aDvViLavP~~~~~~vl  125 (667)
T PLN02712         50 TTQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS--LAARSLGVSF--FLDPHDLCERHPDVILLCTSIISTENVL  125 (667)
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHcCCEE--eCCHHHHhhcCCCEEEEcCCHHHHHHHH
Confidence            34578999999999999999999999999999998554  3455555322  1122221113479999999965321100


Q ss_pred             CCccccccccCccEEEEEeeCCcccHHHHHHHH---cCCeEEccHHHH
Q 007151          459 ETPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMF  503 (616)
Q Consensus       459 ~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~Gl~ML  503 (616)
                       ..+....++++.+++|+.-  -.+..++..++   .|..++.+=.|.
T Consensus       126 -~~l~~~~l~~g~iVvDv~S--vK~~~~~~l~~~l~~~~~~v~~HPMa  170 (667)
T PLN02712        126 -KSLPLQRLKRNTLFVDVLS--VKEFAKNLLLDYLPEDFDIICSHPMF  170 (667)
T ss_pred             -HhhhhhcCCCCeEEEECCC--CcHHHHHHHHHhcCCCCeEEeeCCcC
Confidence             0011123566789999964  33443444443   366677766666

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.84  E-value=0.023  Score=60.76  Aligned_cols=73  Identities=16%  Similarity=0.081  Sum_probs=52.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--c--c--cchhc---ccccCCCCccEEEEc
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--H--A--LSLAD---LENFNPEDGMILANT  448 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~--~--~~~~~---l~~~~~~~~divIna  448 (616)
                      .+++++||+|+ |.+|+.++..|.+.|++|+++.|+.++.+.+...+..  .  .  .++.+   +.+ ...+.|.||++
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDE-AVKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHH-HHcCCCEEEEC
Confidence            46789999997 8899999999999999999999998877776655421  1  1  12222   222 23458999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        87 A~~~   90 (353)
T PLN02896         87 AASM   90 (353)
T ss_pred             Cccc
Confidence            8753

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.035  Score=54.74  Aligned_cols=71  Identities=21%  Similarity=0.328  Sum_probs=50.7

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc--CCCCccEEEEcCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~--~~~~~divInat~~  451 (616)
                      .|+++|+|+ |++|++++..|.+. ++|++++|+.++.+++.+.... ..  .++.+   +..+  .....|+||++++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            478999998 78999999999998 9999999998887777654421 11  23322   2111  12358999999876


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        82 ~   82 (227)
T PRK08219         82 A   82 (227)
T ss_pred             C
Confidence            3

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.81  E-value=0.023  Score=60.00  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=37.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      ++|.|+|+|-+|.+++..|++.|++|++++|+.++.+++.+
T Consensus         5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~   45 (311)
T PRK06130          5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARG   45 (311)
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            57999999999999999999999999999999988777654

>PLN02306 hydroxypyruvate reductase

Probab=95.80  E-value=0.019  Score=62.69  Aligned_cols=39  Identities=26%  Similarity=0.228  Sum_probs=34.5

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEECCHH
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYD  415 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~-~~G~~V~v~nRt~~  415 (616)
                      ..+.||++.|+|.|.+|+++|..|. ..|++|..++|+..
T Consensus       161 ~~L~gktvGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             cCCCCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            3578999999999999999999985 78999999998753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.79  E-value=0.025  Score=56.83  Aligned_cols=71  Identities=32%  Similarity=0.320  Sum_probs=48.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      |+++|+|+ ||+|++++..|++.|++|.+. .|+.++++++.+++.   ...    +++.+   +.++      .....|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            68999998 699999999999999987764 577777777665542   111    12221   1110      134689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++|++++..
T Consensus        83 ~li~~ag~~   91 (248)
T PRK06947         83 ALVNNAGIV   91 (248)
T ss_pred             EEEECCccC
Confidence            999999864

>PRK03731 aroL shikimate kinase II; Reviewed

Probab=95.78  E-value=0.0039  Score=59.67  Aligned_cols=28  Identities=14%  Similarity=0.129  Sum_probs=25.9

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++||||+||||+|+.||+.++.+++
T Consensus         4 ~i~~~G~~GsGKst~~~~la~~lg~~~~   31 (171)
T PRK03731          4 PLFLVGARGCGKTTVGMALAQALGYRFV   31 (171)
T ss_pred             eEEEECCCCCCHHHHHHHHHHHhCCCEE
Confidence            5789999999999999999999998876

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.78  E-value=0.015  Score=58.80  Aligned_cols=36  Identities=28%  Similarity=0.418  Sum_probs=31.9

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      .+.+++|+|+|+||+|..++..|+..|+ ++++++.+
T Consensus        18 ~L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          18 KLKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3567899999999999999999999999 99998543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.76  E-value=0.027  Score=59.89  Aligned_cols=74  Identities=20%  Similarity=0.322  Sum_probs=55.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cchhcccccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInat~  450 (616)
                      +++++.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++..-.       +...+.+  ...++|+||.+++
T Consensus         5 ~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~--~~~~adivIitag   82 (315)
T PRK00066          5 QHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYS--DCKDADLVVITAG   82 (315)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHH--HhCCCCEEEEecC
Confidence            46799999999999999999999987  79999999988888877664211       1111222  2467899999998


Q ss_pred             CCCCC
Q 007151          451 IGMQP  455 (616)
Q Consensus       451 ~gm~p  455 (616)
                      ..-.|
T Consensus        83 ~~~k~   87 (315)
T PRK00066         83 APQKP   87 (315)
T ss_pred             CCCCC
Confidence            75444

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.76  E-value=0.019  Score=59.73  Aligned_cols=120  Identities=13%  Similarity=0.183  Sum_probs=76.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~----~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      +++.+||+|-||.+++..|.+.|.    +|++++|+.++++.++++++....  .+..+ ...++|+||-|++...... 
T Consensus         3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~--~~~~e-~~~~aDiIiLavkP~~~~~-   78 (272)
T PRK12491          3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITIT--TNNNE-VANSADILILSIKPDLYSS-   78 (272)
T ss_pred             CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEe--CCcHH-HHhhCCEEEEEeChHHHHH-
Confidence            479999999999999999999883    699999999999988876664321  12211 1245799999888532211 


Q ss_pred             CCCcccc--ccccCccEEEEEeeCCcccHHHHHHHHcC---CeEEccHHHHHHHHHH
Q 007151          458 DETPIPK--HALGHYALVFDAVYTPKITRLLREAEESG---ATIVSGLEMFIGQAYE  509 (616)
Q Consensus       458 ~~~pi~~--~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G---~~~i~Gl~MLv~Qa~~  509 (616)
                         -+..  ..+++..+++|+.-. -...-++..-...   .++++-....+.+++-
T Consensus        79 ---vl~~l~~~~~~~~lvISi~AG-i~i~~l~~~l~~~~~vvR~MPN~~~~vg~g~t  131 (272)
T PRK12491         79 ---VINQIKDQIKNDVIVVTIAAG-KSIKSTENEFDRKLKVIRVMPNTPVLVGEGMS  131 (272)
T ss_pred             ---HHHHHHHhhcCCcEEEEeCCC-CcHHHHHHhcCCCCcEEEECCChHHHHcCceE
Confidence               0111  124556789999854 2233333322222   2466777777766643

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.75  E-value=0.021  Score=57.33  Aligned_cols=91  Identities=22%  Similarity=0.292  Sum_probs=59.0

Q ss_pred             EEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc----cchhcccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~----~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ++.|+| +|.+|.+++..|.+.|.+|++++|+.++++++++....    ..    ....+..+ ....+|+||-|+|...
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~e-a~~~aDvVilavp~~~   80 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAE-AAKRADVVILAVPWDH   80 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHH-HHhcCCEEEEECCHHH
Confidence            589997 79999999999999999999999999999888765311    00    01111111 2346799999998653


Q ss_pred             CCCCCCCccccccccCccEEEEEe
Q 007151          454 QPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      .+..- ..+. ..+.. ++++|+.
T Consensus        81 ~~~~l-~~l~-~~l~~-~vvI~~~  101 (219)
T TIGR01915        81 VLKTL-ESLR-DELSG-KLVISPV  101 (219)
T ss_pred             HHHHH-HHHH-HhccC-CEEEEec
Confidence            22100 0011 12333 6888875

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.75  E-value=0.024  Score=60.27  Aligned_cols=69  Identities=20%  Similarity=0.258  Sum_probs=47.6

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      +++|++.|||+|-+|++++..|.+.|.+|++.+|.. ++.+++. +.+....+..+    ...++|+|+.++|..
T Consensus         1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~-~~Gv~~~s~~e----a~~~ADiVvLaVpp~   70 (314)
T TIGR00465         1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKAT-EDGFKVGTVEE----AIPQADLIMNLLPDE   70 (314)
T ss_pred             CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHH-HCCCEECCHHH----HHhcCCEEEEeCCcH
Confidence            357999999999999999999999999887766653 3333333 43433322222    134578888888854

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.74  E-value=0.0097  Score=54.83  Aligned_cols=110  Identities=23%  Similarity=0.244  Sum_probs=61.6

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeE-EEEECCHHHHHHHHHHHCCc-ccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARV-VIANRTYDRARELAETVGGH-ALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V-~v~nRt~~ka~~la~~~~~~-~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .-++-|||+|-+|.+++.+|.+.|++| -+++|+.+.++.++..++.. ..++.++    ...+|+++-|+|-..-...-
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~----~~~aDlv~iavpDdaI~~va   85 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEI----LRDADLVFIAVPDDAIAEVA   85 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGG----GCC-SEEEE-S-CCHHHHHH
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccc----cccCCEEEEEechHHHHHHH
Confidence            358999999999999999999999965 46789999989888877643 2333332    34589999999843211000


Q ss_pred             CCccccc-cccCccEEEEEeeCCcccHHHHHHHHcCCeE
Q 007151          459 ETPIPKH-ALGHYALVFDAVYTPKITRLLREAEESGATI  496 (616)
Q Consensus       459 ~~pi~~~-~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~  496 (616)
                       ..+... .+.++++|+=.. .-.....|+-++++|+.+
T Consensus        86 -~~La~~~~~~~g~iVvHtS-Ga~~~~vL~p~~~~Ga~~  122 (127)
T PF10727_consen   86 -EQLAQYGAWRPGQIVVHTS-GALGSDVLAPARERGAIV  122 (127)
T ss_dssp             -HHHHCC--S-TT-EEEES--SS--GGGGHHHHHTT-EE
T ss_pred             -HHHHHhccCCCCcEEEECC-CCChHHhhhhHHHCCCeE
Confidence             001111 134556666554 333455677788888865

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK05057 aroK shikimate kinase I; Reviewed

Probab=95.74  E-value=0.0041  Score=60.09  Aligned_cols=33  Identities=15%  Similarity=0.061  Sum_probs=29.2

Q ss_pred             ccccceecccccCCccchhchhhhhhcCceeeh
Q 007151          538 NKFHIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      ++.++++||++|+||||+++.||+.++.+++=+
T Consensus         3 ~~~~I~liG~~GaGKStl~~~La~~l~~~~vd~   35 (172)
T PRK05057          3 EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS   35 (172)
T ss_pred             CCCEEEEECCCCcCHHHHHHHHHHHcCCcEEEC
Confidence            455799999999999999999999999988744

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.73  E-value=0.018  Score=58.51  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=33.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|.||+|..++..|+..|+ ++++++.+.
T Consensus         8 ~L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           8 KLRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            3567899999999999999999999999 999998653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.73  E-value=0.018  Score=60.57  Aligned_cols=72  Identities=21%  Similarity=0.178  Sum_probs=48.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----C--cc--cchhccccc--CCCCccEEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----G--HA--LSLADLENF--NPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~--~~--~~~~~l~~~--~~~~~divIn  447 (616)
                      .|++++|+|+ |.+|+.++..|.+.|++|++..|+.++.+.+.+...     .  ..  .++.+...+  ...++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            4789999997 899999999999999999988887665444332211     0  11  122221111  2345799999


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      +++.
T Consensus        84 ~A~~   87 (322)
T PLN02986         84 TASP   87 (322)
T ss_pred             eCCC
Confidence            9875

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=95.68  E-value=0.023  Score=58.78  Aligned_cols=67  Identities=22%  Similarity=0.325  Sum_probs=51.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC----CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG----ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G----~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .++.+||+|-||++++..|.+.|    .+|++.||+.++.+.++++++...  ..+... ...+.|+|+-+.-+
T Consensus         2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~--~~~~~~-~~~~advv~LavKP   72 (266)
T COG0345           2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVT--TTDNQE-AVEEADVVFLAVKP   72 (266)
T ss_pred             ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcc--cCcHHH-HHhhCCEEEEEeCh
Confidence            47899999999999999999999    389999999999999999997652  111111 23446788776653

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=95.68  E-value=0.15  Score=56.49  Aligned_cols=54  Identities=22%  Similarity=0.304  Sum_probs=45.2

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEECC
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT  413 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nRt  413 (616)
                      .+.|.+..++..+...       +.+++|++|+|-|.|.+|..++..|.++|++|+ |.+.+
T Consensus       216 TG~Gv~~~~~~~l~~~-------~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~  270 (454)
T PTZ00079        216 TGYGLVYFVLEVLKKL-------NDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSD  270 (454)
T ss_pred             cHHHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence            5788888887766542       357899999999999999999999999999876 77776

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.67  E-value=0.026  Score=60.15  Aligned_cols=39  Identities=31%  Similarity=0.337  Sum_probs=35.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      ++|.|+|+|-||+.+|..++..|++|++++++++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            689999999999999999999999999999998766554

>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]

Probab=95.67  E-value=0.14  Score=57.29  Aligned_cols=185  Identities=18%  Similarity=0.189  Sum_probs=119.8

Q ss_pred             eccCcccccCHHHHHHHHHHcCCCeeEeccCcc----cHHHHHHHh-ccCCCCeEEEcccchHHHHhhhcccc------H
Q 007151          259 IGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD----DIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVD------T  327 (616)
Q Consensus       259 iG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~----~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls------~  327 (616)
                      +|+--..+.--.|-.++.+..|++..|.+++-+    ++-..+..+ .++.+.|+.|-.|+-    .++|+-+      +
T Consensus        42 VGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell~~I~~lNeD~tvHGiiVQLPLp----~hide~~Vt~aI~p  117 (935)
T KOG4230|consen   42 VGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELLREIKALNEDPTVHGIIVQLPLP----AHIDEDTVTEAIDP  117 (935)
T ss_pred             ecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHHHHHHhccCCCccceEEEeccCc----cccchhhHhhccCc
Confidence            454444445557889999999999999998752    333334444 356799999999986    3443311      1


Q ss_pred             --hHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHCC
Q 007151          328 --VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKG  404 (616)
Q Consensus       328 --~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~~~G  404 (616)
                        .+.-.+..|.=.-...+|+-+=+-..-.|++..|++.           +..+.||+++|+|-. -+|+-+++.|....
T Consensus       118 eKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a-----------~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~N  186 (935)
T KOG4230|consen  118 EKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEA-----------GVFVAGKNAVVLGRSKIVGSPIAALLLWAN  186 (935)
T ss_pred             ccccccccccchhhhhccCCCceeeccChHHHHHHHHHc-----------CCccccceeEEEecccccCChHHHHHHhcC
Confidence              1111233332211101444455556678998887653           257889999999975 68999999999999


Q ss_pred             CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE--eeCCcc
Q 007151          405 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA--VYTPKI  482 (616)
Q Consensus       405 ~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di--~Y~P~~  482 (616)
                      +.|+++-..   .+.+++.               ..++||||.+++..   +    -+-.+|++++.+|+|+  +|.|..
T Consensus       187 aTVTiCHSK---T~~lae~---------------v~~ADIvIvAiG~P---e----fVKgdWiKpGavVIDvGINyvpD~  241 (935)
T KOG4230|consen  187 ATVTICHSK---TRNLAEK---------------VSRADIVIVAIGQP---E----FVKGDWIKPGAVVIDVGINYVPDP  241 (935)
T ss_pred             ceEEEecCC---CccHHHH---------------hccCCEEEEEcCCc---c----eeecccccCCcEEEEccccccCCC
Confidence            999997432   2223322               24579999988842   2    2445789999999985  555554


Q ss_pred             c
Q 007151          483 T  483 (616)
Q Consensus       483 T  483 (616)
                      +
T Consensus       242 ~  242 (935)
T KOG4230|consen  242 S  242 (935)
T ss_pred             C
Confidence            3

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.67  E-value=0.067  Score=59.65  Aligned_cols=41  Identities=34%  Similarity=0.429  Sum_probs=35.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARE  419 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~  419 (616)
                      +++++++|+|.||.|+++|..|.++|++|++.++.......
T Consensus         7 ~~~~~i~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~   47 (460)
T PRK01390          7 FAGKTVAVFGLGGSGLATARALVAGGAEVIAWDDNPASRAK   47 (460)
T ss_pred             cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEECCChhhHHH
Confidence            56889999999999999999999999999999987554333

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.67  E-value=0.025  Score=58.29  Aligned_cols=68  Identities=21%  Similarity=0.311  Sum_probs=51.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G---~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .++.|+|+|.+|.+++..|.+.|   .+|++++|+.++++.+.+.++....  .+..+ ...++|+||-|++..
T Consensus         3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~--~~~~~-~~~~advVil~v~~~   73 (267)
T PRK11880          3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAA--TDNQE-AAQEADVVVLAVKPQ   73 (267)
T ss_pred             CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeec--CChHH-HHhcCCEEEEEcCHH
Confidence            46999999999999999999988   5899999999999888876653321  11111 134579999888753

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.65  E-value=0.034  Score=58.16  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=35.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      ++|.|+|+|-+|.+++..|+..|.+|++++|+.++.++.
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            579999999999999999999999999999999887654

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=95.64  E-value=0.03  Score=58.90  Aligned_cols=108  Identities=19%  Similarity=0.204  Sum_probs=68.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.+||.|-||.+++..|.+.|.+|+++||++. ++++++ .+.... +..++    ..++|+||-+.|..-  ...+..
T Consensus         2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~-~g~~~~~s~~~~----~~~advVi~~v~~~~--~v~~v~   73 (292)
T PRK15059          2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLS-LGAVSVETARQV----TEASDIIFIMVPDTP--QVEEVL   73 (292)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHH-cCCeecCCHHHH----HhcCCEEEEeCCChH--HHHHHH
Confidence            588999999999999999999999999999874 555543 333221 22221    245799998888431  111100


Q ss_pred             ccc----ccccCccEEEEEeeC-CcccH-HHHHHHHcCCeEEc
Q 007151          462 IPK----HALGHYALVFDAVYT-PKITR-LLREAEESGATIVS  498 (616)
Q Consensus       462 i~~----~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G~~~i~  498 (616)
                      ..+    ..+.++.+++|+.-. |..+. +-+.++++|+.+++
T Consensus        74 ~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vd  116 (292)
T PRK15059         74 FGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLD  116 (292)
T ss_pred             cCCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence            111    124567899999865 33333 44556677887665

>PRK09414 glutamate dehydrogenase; Provisional

Probab=95.62  E-value=0.067  Score=59.32  Aligned_cols=135  Identities=22%  Similarity=0.204  Sum_probs=81.7

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE-E----------CCHHHHHHHH
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA-N----------RTYDRARELA  421 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~-n----------Rt~~ka~~la  421 (616)
                      -+.|.+.+++..+...       +.+++|++|.|.|-|.+|+.+|..|.+.|++|+.+ +          -+.+...+..
T Consensus       211 Tg~Gv~~~~~~~~~~~-------~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsDs~G~iyn~~GLD~~~L~~~k  283 (445)
T PRK09414        211 TGYGLVYFAEEMLKAR-------GDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSDSSGYVYDEEGIDLEKLKEIK  283 (445)
T ss_pred             ccHHHHHHHHHHHHhc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHH
Confidence            3577777777665432       25789999999999999999999999999987765 5          3555544443


Q ss_pred             HHHCCcccchh--------cccccCCCCccEEEEcCCCCCCCCCCCCcccccccc--CccEEEEEeeCCcccHHHHHH-H
Q 007151          422 ETVGGHALSLA--------DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG--HYALVFDAVYTPKITRLLREA-E  490 (616)
Q Consensus       422 ~~~~~~~~~~~--------~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~--~~~~v~Di~Y~P~~T~ll~~A-~  490 (616)
                      +.-+.....+.        +-+++...++|++|-|+.-+..   +..+.  ..+.  ..+++++-.-+|- |+--.+. .
T Consensus       284 ~~~~~~l~~~~~~~~~~~i~~~~i~~~d~DVliPaAl~n~I---t~~~a--~~i~~~~akiIvEgAN~p~-t~~A~~~L~  357 (445)
T PRK09414        284 EVRRGRISEYAEEFGAEYLEGGSPWSVPCDIALPCATQNEL---DEEDA--KTLIANGVKAVAEGANMPS-TPEAIEVFL  357 (445)
T ss_pred             HhcCCchhhhhhhcCCeecCCccccccCCcEEEecCCcCcC---CHHHH--HHHHHcCCeEEEcCCCCCC-CHHHHHHHH
Confidence            32211110110        1111122358999988875432   11111  1231  4578888888886 6543333 4


Q ss_pred             HcCCeEEccH
Q 007151          491 ESGATIVSGL  500 (616)
Q Consensus       491 ~~G~~~i~Gl  500 (616)
                      ++|+.+++..
T Consensus       358 ~rGI~~vPD~  367 (445)
T PRK09414        358 EAGVLFAPGK  367 (445)
T ss_pred             HCCcEEECch
Confidence            6777766543

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.56  E-value=0.057  Score=60.51  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=32.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nR  412 (616)
                      .+.+|+++|+|.|-.|++++..|.+.|++|++.+-
T Consensus         5 ~~~~~~v~v~G~G~sG~~~~~~l~~~g~~v~~~d~   39 (468)
T PRK04690          5 QLEGRRVALWGWGREGRAAYRALRAHLPAQALTLF   39 (468)
T ss_pred             hcCCCEEEEEccchhhHHHHHHHHHcCCEEEEEcC
Confidence            35689999999999999999999999999999884

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.048  Score=54.78  Aligned_cols=74  Identities=28%  Similarity=0.447  Sum_probs=47.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCcc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~  440 (616)
                      +++++++|+|+ |++|++++..|++.|++|++..| +.++..+.....   +...    .++.+   +..+      ...
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            46789999998 68999999999999998877665 344443333222   2111    12211   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|.||++++.+
T Consensus        84 ~~d~vi~~ag~~   95 (252)
T PRK06077         84 VADILVNNAGLG   95 (252)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=95.56  E-value=0.045  Score=60.67  Aligned_cols=36  Identities=31%  Similarity=0.376  Sum_probs=32.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +.+++|+|+|-|..|++++..|.+.|++|++++.++
T Consensus         5 ~~~~kv~V~GLG~sG~a~a~~L~~~G~~v~v~D~~~   40 (448)
T COG0771           5 FQGKKVLVLGLGKSGLAAARFLLKLGAEVTVSDDRP   40 (448)
T ss_pred             ccCCEEEEEecccccHHHHHHHHHCCCeEEEEcCCC
Confidence            458999999999999999999999999999998543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.54  E-value=0.048  Score=56.61  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=33.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++.+.
T Consensus        27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            4678899999999999999999999998 999998763

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.031  Score=56.47  Aligned_cols=45  Identities=33%  Similarity=0.434  Sum_probs=37.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  424 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~  424 (616)
                      ++|+++|+|+ ||+|++++..|++.|++|.+.. |+.++.++++.++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   49 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   49 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            5789999998 6999999999999999998864 6667776665554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.52  E-value=0.039  Score=54.89  Aligned_cols=74  Identities=34%  Similarity=0.384  Sum_probs=48.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhccc---cc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLADLE---NF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~l~---~~------~~~  440 (616)
                      +.+|+++|+|+ |++|++++..|.+.|++|++..| +.+..+.+++...   ...    .++.+..   ++      ...
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            45689999998 89999999999999998776554 4444455544432   111    2222211   10      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        84 ~id~vi~~ag~~   95 (249)
T PRK12825         84 RIDILVNNAGIF   95 (249)
T ss_pred             CCCEEEECCccC
Confidence            679999999854

>PRK08507 prephenate dehydrogenase; Validated

Probab=95.51  E-value=0.028  Score=58.35  Aligned_cols=111  Identities=13%  Similarity=0.161  Sum_probs=70.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      ++.|+|.|.+|.+++..|.+.|.  +|++++|+.++.+.+. +.+... ...+..+  ..++|+||-|+|.......- .
T Consensus         2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~-~~g~~~-~~~~~~~--~~~aD~Vilavp~~~~~~~~-~   76 (275)
T PRK08507          2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKAL-ELGLVD-EIVSFEE--LKKCDVIFLAIPVDAIIEIL-P   76 (275)
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH-HCCCCc-ccCCHHH--HhcCCEEEEeCcHHHHHHHH-H
Confidence            58999999999999999999986  7999999998877654 333210 0111222  12389999999975322100 0


Q ss_pred             ccccccccCccEEEEEeeCCcccHHHHHHHHc-CCeEEccHHH
Q 007151          461 PIPKHALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEM  502 (616)
Q Consensus       461 pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~~~i~Gl~M  502 (616)
                      .+..  +.+..+++|+...  ...+.+.+.+. +..++.+-.|
T Consensus        77 ~l~~--l~~~~iv~d~gs~--k~~i~~~~~~~~~~~~v~~hPm  115 (275)
T PRK08507         77 KLLD--IKENTTIIDLGST--KAKIIESVPKHIRKNFIAAHPM  115 (275)
T ss_pred             HHhc--cCCCCEEEECccc--hHHHHHHHHHhcCCCEEecCCc
Confidence            1211  4566789997553  34455555442 3456666565

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.50  E-value=0.034  Score=58.16  Aligned_cols=97  Identities=21%  Similarity=0.272  Sum_probs=70.1

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc----chhcccccCCCCccEEEEcCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~----~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ...+|+|+|.|-+|.-++.-...+|++|+|.+++.+|.+.+-..|+.+..    +...+++ ...++|++|++.=+.-..
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee-~v~~aDlvIgaVLIpgak  245 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEE-AVKKADLVIGAVLIPGAK  245 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHH-HhhhccEEEEEEEecCCC
Confidence            45689999999999999999999999999999999999999998887631    2233444 456789999987432110


Q ss_pred             CCCCCccccc---cccCccEEEEEeeC
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                        .+..+..+   .++++.+++|+.-.
T Consensus       246 --aPkLvt~e~vk~MkpGsVivDVAiD  270 (371)
T COG0686         246 --APKLVTREMVKQMKPGSVIVDVAID  270 (371)
T ss_pred             --CceehhHHHHHhcCCCcEEEEEEEc
Confidence              11112222   35677888888764

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.50  E-value=0.04  Score=57.54  Aligned_cols=66  Identities=18%  Similarity=0.220  Sum_probs=48.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc---------cchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA---------LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~---------~~~~~l~~~~~~~~divInat~~  451 (616)
                      ++.|+|+|.+|..++..|++.|.+|++++|+.++.+.+.+. +...         ....+..+  ...+|+||-|++.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~d~vila~k~   76 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNEN-GLRLEDGEITVPVLAADDPAE--LGPQDLVILAVKA   76 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc-CCcccCCceeecccCCCChhH--cCCCCEEEEeccc
Confidence            58999999999999999999999999999988887776543 2111         01112221  2568999998875

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.44  E-value=0.021  Score=60.77  Aligned_cols=148  Identities=22%  Similarity=0.254  Sum_probs=93.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||+|.|+|.|.+|+++++.|...|+.+.-.+|+..+.+... +++....+++++    ..++|+||-+.|..-.. 
T Consensus       158 ~~~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~-~~~~~~~d~~~~----~~~sD~ivv~~pLt~~T-  231 (336)
T KOG0069|consen  158 YDLEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAY-EYYAEFVDIEEL----LANSDVIVVNCPLTKET-  231 (336)
T ss_pred             ccccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhHH-HhcccccCHHHH----HhhCCEEEEecCCCHHH-
Confidence            467899999999999999999999999977888888766544433 333444454443    34689999999975321 


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVL  532 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~~  532 (616)
                        .-.+...   ..+++.+++.+.-.+- +-.-+.+|-+.|-..--|++++-           -.+ |....     +  
T Consensus       232 --~~liNk~~~~~mk~g~vlVN~aRG~iide~~l~eaL~sG~i~~aGlDVf~-----------~EP-~~~~~-----l--  290 (336)
T KOG0069|consen  232 --RHLINKKFIEKMKDGAVLVNTARGAIIDEEALVEALKSGKIAGAGLDVFE-----------PEP-PVDHP-----L--  290 (336)
T ss_pred             --HHHhhHHHHHhcCCCeEEEeccccccccHHHHHHHHhcCCcccccccccC-----------CCC-CCCcc-----h--
Confidence              1123332   3456667776655443 23344566667766667777542           223 33322     2  


Q ss_pred             HHhhcccccceecccccCCccchhc
Q 007151          533 LLYSFNKFHIFTYFLFSFGNFSAEG  557 (616)
Q Consensus       533 i~~~~~~~~~~~~~~~~~~~~~~~~  557 (616)
                       .++.+     +++.|=.|-+|...
T Consensus       291 -~~~dn-----vv~~PHigs~t~~t  309 (336)
T KOG0069|consen  291 -LTLDN-----VVILPHIGSATLET  309 (336)
T ss_pred             -hcccc-----eeEecccccCcHHH
Confidence             11222     46788888888764

>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants

Probab=95.42  E-value=0.0063  Score=56.73  Aligned_cols=28  Identities=14%  Similarity=0.184  Sum_probs=25.4

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|+||+||||+++.||+.++.+++
T Consensus         1 ~i~l~G~~GsGKstla~~la~~l~~~~~   28 (154)
T cd00464           1 NIVLIGMMGAGKTTVGRLLAKALGLPFV   28 (154)
T ss_pred             CEEEEcCCCCCHHHHHHHHHHHhCCCEE
Confidence            4689999999999999999999988775

Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.0098  Score=59.18  Aligned_cols=37  Identities=27%  Similarity=0.329  Sum_probs=33.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      .+|+++|+|+ |++|++++..|.+.|++|+++.|+.++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~   39 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID   39 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            4689999998 799999999999999999999998654

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.041  Score=55.19  Aligned_cols=72  Identities=28%  Similarity=0.337  Sum_probs=48.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~~~  442 (616)
                      ++.++|+|+ |++|++++..|.+.|++|++.. |+.++.+++.+.+.   ...    .++.+.   .++      .....
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            468999998 6999999999999999877765 56666666655442   211    122221   110      12467


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        82 d~li~~ag~~   91 (248)
T PRK06123         82 DALVNNAGIL   91 (248)
T ss_pred             CEEEECCCCC
Confidence            9999998764

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=95.34  E-value=0.052  Score=57.51  Aligned_cols=113  Identities=24%  Similarity=0.264  Sum_probs=72.9

Q ss_pred             cEEEEEccchhH-HHHHHHHHHCC--C-eEEEEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          382 KLFVVIGAGGAG-KALAYGAKAKG--A-RVVIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       382 k~vlVlGAGGag-rAia~~L~~~G--~-~V~v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      -++.|+|+|+.+ +..+..+.+.+  + -+.+++|+.+++++++++++..  +-+++++-+  ..+.|+|+.+||...+.
T Consensus         4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~--~~~iD~V~Iatp~~~H~   81 (342)
T COG0673           4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAYTDLEELLA--DPDIDAVYIATPNALHA   81 (342)
T ss_pred             eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEEcCCChhhH
Confidence            479999999655 56788888876  4 5888999999999999999864  234554432  24489999999976542


Q ss_pred             CCCCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          456 KVDETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                      .     +....|..+. +++|  +..++.+ ..+.+.|+++|....-|..
T Consensus        82 e-----~~~~AL~aGkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~  126 (342)
T COG0673          82 E-----LALAALEAGKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFN  126 (342)
T ss_pred             H-----HHHHHHhcCCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehh
Confidence            1     2233444333 3322  1112222 3456677777777766655

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.34  E-value=0.064  Score=58.33  Aligned_cols=100  Identities=17%  Similarity=0.109  Sum_probs=59.8

Q ss_pred             EEEEecCHHHHHHHHHhhhc--ccCCCCCCcccccCCcEEEEEcc-chhHHH--HHHHHHHCCCeEEEEECCHH------
Q 007151          347 LFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGA-GGAGKA--LAYGAKAKGARVVIANRTYD------  415 (616)
Q Consensus       347 l~G~NTD~~G~~~~L~~~l~--~~~~~~~~~~~~l~~k~vlVlGA-GGagrA--ia~~L~~~G~~V~v~nRt~~------  415 (616)
                      .+-.|+--.|.....++.+.  +..+     ...-.+|++||+|+ +|.|.|  ++.+| +.|+++.++.+..+      
T Consensus        10 ~i~~~~hp~gc~~~v~~qi~~~~~~~-----~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~   83 (398)
T PRK13656         10 FICTTAHPVGCEANVKEQIEYVKAQG-----PIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKT   83 (398)
T ss_pred             eeECCCCCHHHHHHHHHHHHHHHhcC-----CcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcc
Confidence            55556666777666654321  1111     01234699999998 589999  89999 99998777774321      


Q ss_pred             ---------HHHHHHHHHCCcc----cchh---c-------ccccCCCCccEEEEcCCCCC
Q 007151          416 ---------RARELAETVGGHA----LSLA---D-------LENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       416 ---------ka~~la~~~~~~~----~~~~---~-------l~~~~~~~~divInat~~gm  453 (616)
                               ..+++++..+...    .++.   +       +.+ ..+..|+|||+.+.+.
T Consensus        84 ~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e-~~G~IDiLVnSaA~~~  143 (398)
T PRK13656         84 GTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQ-DLGQVDLVVYSLASPR  143 (398)
T ss_pred             cccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH-hcCCCCEEEECCccCC
Confidence                     1333444444321    1221   1       111 3467899999998664

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.33  E-value=0.043  Score=57.99  Aligned_cols=39  Identities=26%  Similarity=0.217  Sum_probs=35.2

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      ++|.|+|+|-+|.+++..|++.|.+|++++|+.++.+..
T Consensus         3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            469999999999999999999999999999998776654

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.33  E-value=0.08  Score=54.50  Aligned_cols=131  Identities=21%  Similarity=0.205  Sum_probs=77.7

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHH
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELA  421 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nR----------t~~ka~~la  421 (616)
                      -+.|.+.+++..+...       +.+++|++++|.|-|.+|+.++..|.+.|++|+ |.+.          +.+....+.
T Consensus        17 Tg~Gv~~~~~~~~~~~-------~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD~~G~i~~~~Gld~~~l~~l~   89 (254)
T cd05313          17 TGYGLVYFVEEMLKDR-------NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELK   89 (254)
T ss_pred             hHHHHHHHHHHHHHhc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCceEECCCCCCHHHHHHHH
Confidence            3678888887765532       357899999999999999999999999999877 6552          233333322


Q ss_pred             H---HHCC------------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCcccccccc--CccEEEEEeeCCcccH
Q 007151          422 E---TVGG------------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALG--HYALVFDAVYTPKITR  484 (616)
Q Consensus       422 ~---~~~~------------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~--~~~~v~Di~Y~P~~T~  484 (616)
                      +   .-+.            +.++-+++   ...++||+|-|+--+.-   +....  ..+.  ..+++++-.-+|- |+
T Consensus        90 ~~~~~~~~~v~~~~~~~~~a~~~~~~~~---~~~~~DIliPcAl~~~I---~~~na--~~i~~~~ak~I~EgAN~p~-t~  160 (254)
T cd05313          90 EIKEVRRGRVSEYAKKYGTAKYFEGKKP---WEVPCDIAFPCATQNEV---DAEDA--KLLVKNGCKYVAEGANMPC-TA  160 (254)
T ss_pred             HHHHhcCCcHHHHhhcCCCCEEeCCcch---hcCCCcEEEeccccccC---CHHHH--HHHHHcCCEEEEeCCCCCC-CH
Confidence            1   1110            11111111   22358999977654321   11111  1232  4578888887775 55


Q ss_pred             H-HHHHHHcCCeEEcc
Q 007151          485 L-LREAEESGATIVSG  499 (616)
Q Consensus       485 l-l~~A~~~G~~~i~G  499 (616)
                      - -+.-+++|+.+++.
T Consensus       161 ~a~~~L~~rGI~vvPD  176 (254)
T cd05313         161 EAIEVFRQAGVLFAPG  176 (254)
T ss_pred             HHHHHHHHCCcEEECc
Confidence            2 12223677776653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.31  E-value=0.091  Score=59.31  Aligned_cols=36  Identities=33%  Similarity=0.533  Sum_probs=32.5

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +.+++++|+|.|+.|+++|..|.+.|++|++.+...
T Consensus         5 ~~~~~i~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~   40 (498)
T PRK02006          5 LQGPMVLVLGLGESGLAMARWCARHGARLRVADTRE   40 (498)
T ss_pred             cCCCEEEEEeecHhHHHHHHHHHHCCCEEEEEcCCC
Confidence            567899999999999999999999999999998643

>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea

Probab=95.30  E-value=0.26  Score=49.88  Aligned_cols=157  Identities=17%  Similarity=0.120  Sum_probs=0.0

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 007151           33 ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGA  112 (616)
Q Consensus        33 ~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~  112 (616)
                      .+.++..+-++.+.+.|+|++=+..-+++      ...... ..+.|++..++...-=|....+.+.....++.+++.|+
T Consensus        18 ~~~~d~~~~~~~~~~~g~~av~v~~~~~~------~~~~~~-~~~~~~i~~~~~~~~i~~p~~~~~~~~~~v~~a~~~Ga   90 (235)
T cd00958          18 PGLEDPEETVKLAAEGGADAVALTKGIAR------AYGREY-AGDIPLIVKLNGSTSLSPKDDNDKVLVASVEDAVRLGA   90 (235)
T ss_pred             ccccCHHHHHHHHHhcCCCEEEeChHHHH------hccccc-CCCCcEEEEECCCCCCCCCCCCchhhhcCHHHHHHCCC


Q ss_pred             cEEEEEcccchh-------hhHHhhc-cCCCCceEEEEecc----CCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 007151          113 DYIDVELQVARE-------FNDSIRG-KKPEKCKVIVSSHN----YQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (616)
Q Consensus       113 dyvDIEl~~~~~-------~~~~l~~-~~~~~~kiI~S~Hd----f~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~  180 (616)
                      +.||+.++....       .++++.. .++.+.++|+--|.    ....-+.+++....+.+.+.|||++|+-.+.    
T Consensus        91 ~~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD~Ik~~~~~----  166 (235)
T cd00958          91 DAVGVTVYVGSEEEREMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGADIVKTKYTG----  166 (235)
T ss_pred             CEEEEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCCEEEecCCC----


Q ss_pred             HHHHHHHHhhcCCCCEEEEe
Q 007151          181 DVARVFQITVHSQVPIIGLV  200 (616)
Q Consensus       181 D~~~ll~~~~~~~~plI~i~  200 (616)
                      |...+-++.+..+.|+++++
T Consensus       167 ~~~~~~~i~~~~~~pvv~~G  186 (235)
T cd00958         167 DAESFKEVVEGCPVPVVIAG  186 (235)
T ss_pred             CHHHHHHHHhcCCCCEEEeC

Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.26  E-value=0.065  Score=53.49  Aligned_cols=71  Identities=28%  Similarity=0.339  Sum_probs=47.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHHHHC---Ccc----cchhc---cccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAETVG---GHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      |+++|+|+ |++|++++..|.+.|++|++..|+.+ .++++.....   .+.    .++.+   +.+.      .....|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999997 79999999999999999999999743 3444443332   111    22221   1110      234589


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12824         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.26  E-value=0.069  Score=59.67  Aligned_cols=35  Identities=14%  Similarity=0.156  Sum_probs=30.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      ++|+++|+|.|..|++++..|.+ |++|++++...+
T Consensus         5 ~~~~v~v~G~G~sG~a~~~~L~~-g~~v~v~D~~~~   39 (454)
T PRK01368          5 TKQKIGVFGLGKTGISVYEELQN-KYDVIVYDDLKA   39 (454)
T ss_pred             CCCEEEEEeecHHHHHHHHHHhC-CCEEEEECCCCC
Confidence            47899999999999999999994 999999986533

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.25  E-value=0.032  Score=58.51  Aligned_cols=38  Identities=26%  Similarity=0.233  Sum_probs=33.1

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA  417 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka  417 (616)
                      ++|+++|+|+ |.+|+.++..|.+.|++|+++.|+.++.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~   41 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP   41 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch
Confidence            3689999997 8999999999999999999988876543

>PRK08017 oxidoreductase; Provisional

Probab=95.22  E-value=0.04  Score=55.56  Aligned_cols=71  Identities=28%  Similarity=0.378  Sum_probs=50.3

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccc----c---CCCCccEEEEc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LEN----F---NPEDGMILANT  448 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~----~---~~~~~divIna  448 (616)
                      |+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+ .+...  .++.+   +.+    .   .....|.+||+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            67999998 899999999999999999999999988766543 23221  12221   111    0   12457899999


Q ss_pred             CCCCC
Q 007151          449 TSIGM  453 (616)
Q Consensus       449 t~~gm  453 (616)
                      ++.+.
T Consensus        82 ag~~~   86 (256)
T PRK08017         82 AGFGV   86 (256)
T ss_pred             CCCCC
Confidence            88654

>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS)

Probab=95.21  E-value=0.42  Score=46.89  Aligned_cols=130  Identities=18%  Similarity=0.137  Sum_probs=79.2

Q ss_pred             eEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCCHHHHHH
Q 007151           24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENERVD  102 (616)
Q Consensus        24 ~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~Rt~~eGG~~~~~~e~~~~  102 (616)
                      +.||+.|-..+.+++..-++...+. ++.+|+-..+..... .+.++.+++. .+.|++.+.-.. +.+       .  .
T Consensus         1 ~~~~~a~d~~~~~~~~~~~~~l~~~-i~~ieig~~~~~~~g-~~~i~~i~~~~~~~~i~~~~~v~-~~~-------~--~   68 (202)
T cd04726           1 PLLQVALDLLDLEEALELAKKVPDG-VDIIEAGTPLIKSEG-MEAVRALREAFPDKIIVADLKTA-DAG-------A--L   68 (202)
T ss_pred             CceEEEEcCCCHHHHHHHHHHhhhc-CCEEEcCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEEec-ccc-------H--H
Confidence            3689999999999999887776555 999999666643322 3467777765 488998864432 111       1  2


Q ss_pred             HHHHHHHhCCcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          103 VLRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       103 ll~~~~~~g~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                      .++.+.+.|++++=+-.....+..+++.. .+..+.++++.-+.. .||  ++.   ++ +...|+|++++
T Consensus        69 ~~~~~~~aGad~i~~h~~~~~~~~~~~i~~~~~~g~~~~v~~~~~-~t~--~e~---~~-~~~~~~d~v~~  132 (202)
T cd04726          69 EAEMAFKAGADIVTVLGAAPLSTIKKAVKAAKKYGKEVQVDLIGV-EDP--EKR---AK-LLKLGVDIVIL  132 (202)
T ss_pred             HHHHHHhcCCCEEEEEeeCCHHHHHHHHHHHHHcCCeEEEEEeCC-CCH--HHH---HH-HHHCCCCEEEE
Confidence            34677888999877644433222222221 233567777654422 122  233   22 55568888888

KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.20  E-value=0.044  Score=61.93  Aligned_cols=40  Identities=20%  Similarity=0.181  Sum_probs=36.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  421 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la  421 (616)
                      ++|.|||+|-||.++|..|+..|.+|++++|++++.+.+.
T Consensus         5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~   44 (495)
T PRK07531          5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIG   44 (495)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4799999999999999999999999999999998877653

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.20  E-value=0.064  Score=47.69  Aligned_cols=66  Identities=29%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-----cchhcccccCCCCccEEEEcCC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-----~~~~~l~~~~~~~~divInat~  450 (616)
                      ++|+|.|..|+.++..|.+.+.+|+++++++++.+.+.++. ...     .+.+.+.+....+++.+|-+++
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG-VEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT-SEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc-cccccccchhhhHHhhcCccccCEEEEccC
Confidence            68999999999999999996669999999999988887654 221     1222233334567888888777

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.13  E-value=0.041  Score=49.08  Aligned_cols=108  Identities=23%  Similarity=0.265  Sum_probs=68.2

Q ss_pred             EEEEEccchhHHHHHHHHHHCC--Ce-EEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG--AR-VVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G--~~-V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++.|+|+|.+|+.....+.+..  .+ +.+++++.+++++++++++... -+++++-+  ..+.|+++.+||...+.   
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~I~tp~~~h~---   76 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPVYTDLEELLA--DEDVDAVIIATPPSSHA---   76 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEEESSHHHHHH--HTTESEEEEESSGGGHH---
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccchhHHHHHHH--hhcCCEEEEecCCcchH---
Confidence            6899999999999998888873  35 4589999999999999987653 23444322  13689999999965332   


Q ss_pred             CCccccccccCc-cEEEE--EeeCCc-ccHHHHHHHHcCCeEE
Q 007151          459 ETPIPKHALGHY-ALVFD--AVYTPK-ITRLLREAEESGATIV  497 (616)
Q Consensus       459 ~~pi~~~~l~~~-~~v~D--i~Y~P~-~T~ll~~A~~~G~~~i  497 (616)
                        ++-...++.+ .+++|  +..++. --.+.+.+++.|..+.
T Consensus        77 --~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~  117 (120)
T PF01408_consen   77 --EIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEKGVKVM  117 (120)
T ss_dssp             --HHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHHTSCEE
T ss_pred             --HHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEEE
Confidence              1212233322 33333  111222 1445566667776543

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=95.12  E-value=0.051  Score=57.80  Aligned_cols=69  Identities=32%  Similarity=0.427  Sum_probs=52.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      .-+.||+++|.|-|-.||.+|..|...|++|.|..-++-+|-+.+=+ |.++.++++.    ....|++|-||+
T Consensus       205 ~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~Md-Gf~V~~m~~A----a~~gDifiT~TG  273 (420)
T COG0499         205 VLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMD-GFRVMTMEEA----AKTGDIFVTATG  273 (420)
T ss_pred             eeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhc-CcEEEEhHHh----hhcCCEEEEccC
Confidence            56789999999999999999999999999999999988776554321 2344444442    234688888876

>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.12  E-value=0.099  Score=58.10  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=30.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +..++|+|.||.|+++|..|.+.|++|++.++..
T Consensus         6 ~~~~~v~G~G~sG~s~a~~L~~~G~~v~~~D~~~   39 (448)
T PRK03803          6 DGLHIVVGLGKTGLSVVRFLARQGIPFAVMDSRE   39 (448)
T ss_pred             CCeEEEEeecHhHHHHHHHHHhCCCeEEEEeCCC
Confidence            4579999999999999999999999999999753

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=95.12  E-value=0.13  Score=55.89  Aligned_cols=128  Identities=23%  Similarity=0.253  Sum_probs=77.8

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH------------------
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD------------------  415 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~------------------  415 (616)
                      +.|...+.+..+...       +.+++|++|.|-|.|.+|+.+|..|.+.|++|+.++-+..                  
T Consensus       187 g~Gv~~~~~~a~~~~-------g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~  259 (411)
T COG0334         187 GYGVFYAIREALKAL-------GDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKE  259 (411)
T ss_pred             ceehHHHHHHHHHHc-------CCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhh
Confidence            456666666443321       2358999999999999999999999999999888776554                  


Q ss_pred             HHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCe
Q 007151          416 RARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT  495 (616)
Q Consensus       416 ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~  495 (616)
                      +.+.+++.++.+.++-+++-   ..++||++-|+--+.-.   ...  ...+.. .+|++-.-+|....-.+.-.++|+-
T Consensus       260 ~~~~v~~~~ga~~i~~~e~~---~~~cDIl~PcA~~n~I~---~~n--a~~l~a-k~V~EgAN~P~t~eA~~i~~erGIl  330 (411)
T COG0334         260 RRGSVAEYAGAEYITNEELL---EVDCDILIPCALENVIT---EDN--ADQLKA-KIVVEGANGPTTPEADEILLERGIL  330 (411)
T ss_pred             hhhhHHhhcCceEccccccc---cccCcEEcccccccccc---hhh--HHHhhh-cEEEeccCCCCCHHHHHHHHHCCCE
Confidence            44455555554443333322   23578888666433211   100  112332 4777877777654444444466665


Q ss_pred             EE
Q 007151          496 IV  497 (616)
Q Consensus       496 ~i  497 (616)
                      +.
T Consensus       331 ~~  332 (411)
T COG0334         331 VV  332 (411)
T ss_pred             Ec
Confidence            44

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.11  E-value=0.059  Score=57.49  Aligned_cols=74  Identities=19%  Similarity=0.274  Sum_probs=51.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC------Ccc--cc-hhcccccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG------GHA--LS-LADLENFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~------~~~--~~-~~~l~~~~~~~~divInat  449 (616)
                      +.+++.|+|||.+|.++++.++..|. +|+++++++++++..+-++.      ...  +. ..+.+  ...++|+||+++
T Consensus         5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~--~l~~aDiVI~ta   82 (321)
T PTZ00082          5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYE--DIAGSDVVIVTA   82 (321)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHH--HhCCCCEEEECC
Confidence            45789999999999999999999996 99999998876543322211      100  11 12332  246789999999


Q ss_pred             CCCCCC
Q 007151          450 SIGMQP  455 (616)
Q Consensus       450 ~~gm~p  455 (616)
                      +.+-.|
T Consensus        83 g~~~~~   88 (321)
T PTZ00082         83 GLTKRP   88 (321)
T ss_pred             CCCCCC
Confidence            876544

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.11  E-value=0.079  Score=56.12  Aligned_cols=71  Identities=18%  Similarity=0.285  Sum_probs=51.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-cc------chhcccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-AL------SLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~-~~------~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ++.|+|+|.+|.++++.|+..|.  +|.+++|+.++++..+.++... ..      ...+.+  ...++|++|.|++...
T Consensus         2 kI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~--~l~~aDiViita~~~~   79 (308)
T cd05292           2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYA--DCKGADVVVITAGANQ   79 (308)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHH--HhCCCCEEEEccCCCC
Confidence            68999999999999999999994  8999999998887655544321 10      001222  2456899999999765


Q ss_pred             CC
Q 007151          454 QP  455 (616)
Q Consensus       454 ~p  455 (616)
                      .|
T Consensus        80 ~~   81 (308)
T cd05292          80 KP   81 (308)
T ss_pred             CC
Confidence            44

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02686 cinnamoyl-CoA reductase

Probab=95.11  E-value=0.043  Score=59.43  Aligned_cols=45  Identities=24%  Similarity=0.230  Sum_probs=38.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELA  421 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la  421 (616)
                      .+.++|+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3567899999998 89999999999999999999889887766653

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.11  E-value=0.04  Score=61.95  Aligned_cols=79  Identities=18%  Similarity=0.223  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEccch-hHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc---------cchhcc---cc-cCCCCc
Q 007151          378 ALAGKLFVVIGAGG-AGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA---------LSLADL---EN-FNPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGAGG-agrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~---------~~~~~l---~~-~~~~~~  442 (616)
                      .+.||+++|+|||| +|..++.++++.+. ++.+++|+.-+...+..++....         .++.|.   .. +...+.
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            46899999999975 89999999999998 99999999888888777765421         122222   11 112348


Q ss_pred             cEEEEcCCCCCCCC
Q 007151          443 MILANTTSIGMQPK  456 (616)
Q Consensus       443 divInat~~gm~p~  456 (616)
                      |+|++|+..=..|.
T Consensus       327 d~VfHAAA~KHVPl  340 (588)
T COG1086         327 DIVFHAAALKHVPL  340 (588)
T ss_pred             ceEEEhhhhccCcc
Confidence            99999997655554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.10  E-value=0.061  Score=59.59  Aligned_cols=69  Identities=23%  Similarity=0.339  Sum_probs=52.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInat~~  451 (616)
                      +++|+|+|.+|++++..|.+.|.+|++++|+.++.+++.+..+...+     +...+.+....++|.+|.+++-
T Consensus         2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~   75 (453)
T PRK09496          2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS   75 (453)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence            68999999999999999999999999999999998888764443221     1122333235678999988874

>PLN02650 dihydroflavonol-4-reductase

Probab=95.10  E-value=0.035  Score=59.32  Aligned_cols=71  Identities=15%  Similarity=0.134  Sum_probs=49.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---C--c--c--cchhc---ccccCCCCccEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---G--H--A--LSLAD---LENFNPEDGMILA  446 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~--~--~--~~~~~---l~~~~~~~~divI  446 (616)
                      .+|++||+|+ |.+|+.++..|.+.|.+|+++.|+.++...+.....   .  .  .  .++.+   +.+ ...++|.||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD-AIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH-HHhCCCEEE
Confidence            4679999998 889999999999999999999998766655543221   0  1  1  12222   122 234579999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      ++++.
T Consensus        83 H~A~~   87 (351)
T PLN02650         83 HVATP   87 (351)
T ss_pred             EeCCC
Confidence            98864

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.09  E-value=0.038  Score=60.87  Aligned_cols=38  Identities=26%  Similarity=0.334  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ..+.||++.|+|.|.+|+.+|..+...|.+|+.++|+.
T Consensus       147 ~~L~gktvGIiG~G~IG~~vA~~~~~fGm~V~~~d~~~  184 (409)
T PRK11790        147 FEVRGKTLGIVGYGHIGTQLSVLAESLGMRVYFYDIED  184 (409)
T ss_pred             ccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence            35789999999999999999999999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.09  E-value=0.027  Score=59.83  Aligned_cols=73  Identities=19%  Similarity=0.141  Sum_probs=48.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--HHC----Ccc--cchhc---ccccCCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVG----GHA--LSLAD---LENFNPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~--~~~----~~~--~~~~~---l~~~~~~~~div  445 (616)
                      +.++++++|+|+ |.+|+.++..|.+.|++|.++.|+.+....+..  .+.    ...  .++.+   +.. ...++|+|
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~v   84 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA-PIAGCDLV   84 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH-HHhcCCEE
Confidence            456899999997 789999999999999999888887544332221  111    111  13222   222 23468999


Q ss_pred             EEcCCC
Q 007151          446 ANTTSI  451 (616)
Q Consensus       446 Inat~~  451 (616)
                      ||+++.
T Consensus        85 ih~A~~   90 (338)
T PLN00198         85 FHVATP   90 (338)
T ss_pred             EEeCCC
Confidence            998864

>PRK14031 glutamate dehydrogenase; Provisional

Probab=95.08  E-value=0.13  Score=57.05  Aligned_cols=51  Identities=25%  Similarity=0.340  Sum_probs=42.7

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA  410 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~  410 (616)
                      -+.|.+.+++..++..       +.+++|++|+|.|.|.+|..++..|.+.|++|+.+
T Consensus       207 Tg~Gv~~~~~~~~~~~-------g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaV  257 (444)
T PRK14031        207 TGYGNIYFLMEMLKTK-------GTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTM  257 (444)
T ss_pred             cHHHHHHHHHHHHHhc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence            3688888887766542       35789999999999999999999999999987763

>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain

Probab=95.08  E-value=0.57  Score=49.13  Aligned_cols=84  Identities=26%  Similarity=0.383  Sum_probs=59.4

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecC----------CCCCCh-hhHHHHHhhhCCCcEEEEeccCCCCCCC
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDG----------LKNFNP-RENIKTLIKESPVPTLFTYRPIWEGGQY   93 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~----------l~~~~~-~~~l~~l~~~~~~PiI~T~Rt~~eGG~~   93 (616)
                      .+.++|.+.+.++....++.+.+.|+|.||+-+-+          ..+.+. .+.++.+++..++|+.+-++..      
T Consensus        91 p~ivsi~g~~~~~~~~~a~~~~~~G~d~iElN~~cP~~~~~g~~~~~~~~~~~eiv~~vr~~~~~Pv~vKl~~~------  164 (296)
T cd04740          91 PVIASIAGSTVEEFVEVAEKLADAGADAIELNISCPNVKGGGMAFGTDPEAVAEIVKAVKKATDVPVIVKLTPN------  164 (296)
T ss_pred             cEEEEEecCCHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCcccccCCHHHHHHHHHHHHhccCCCEEEEeCCC------
Confidence            46789999999999888888878899999995432          221111 1334555555689999888631      


Q ss_pred             CCCHHHHHHHHHHHHHhCCcEEEE
Q 007151           94 DGDENERVDVLRLAMELGADYIDV  117 (616)
Q Consensus        94 ~~~~e~~~~ll~~~~~~g~dyvDI  117 (616)
                         .++-.++.+.+.+.|+|+|++
T Consensus       165 ---~~~~~~~a~~~~~~G~d~i~~  185 (296)
T cd04740         165 ---VTDIVEIARAAEEAGADGLTL  185 (296)
T ss_pred             ---chhHHHHHHHHHHcCCCEEEE
Confidence               224567777888899999876

DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.

>PRK07680 late competence protein ComER; Validated

Probab=95.07  E-value=0.039  Score=57.23  Aligned_cols=119  Identities=18%  Similarity=0.115  Sum_probs=70.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHH-CCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~----~V~v~nRt~~ka~~la~~~-~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      ++.|+|+|.+|.+++..|.+.|.    +|++++|+.++++.+++++ +....  .+..+ ...++|+||-+++.......
T Consensus         2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~--~~~~~-~~~~aDiVilav~p~~~~~v   78 (273)
T PRK07680          2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVA--KTIEE-VISQSDLIFICVKPLDIYPL   78 (273)
T ss_pred             EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEE--CCHHH-HHHhCCEEEEecCHHHHHHH
Confidence            58999999999999999999883    7999999999998888765 22221  11111 12457999998874321100


Q ss_pred             CCCccccccccCccEEEEEeeCCcccHHHHHHH-HcCCeEEccHHHHHHHH
Q 007151          458 DETPIPKHALGHYALVFDAVYTPKITRLLREAE-ESGATIVSGLEMFIGQA  507 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~-~~G~~~i~Gl~MLv~Qa  507 (616)
                      - ..+. ..+.+..+++++. ++....-++... ....+++++....+.++
T Consensus        79 l-~~l~-~~l~~~~~iis~~-ag~~~~~L~~~~~~~~~r~~p~~~~~~~~G  126 (273)
T PRK07680         79 L-QKLA-PHLTDEHCLVSIT-SPISVEQLETLVPCQVARIIPSITNRALSG  126 (273)
T ss_pred             H-HHHH-hhcCCCCEEEEEC-CCCCHHHHHHHcCCCEEEECCChHHHHhhc
Confidence            0 0011 1344567888887 333332222221 12346677655444333

>PRK14030 glutamate dehydrogenase; Provisional

Probab=95.05  E-value=0.14  Score=56.86  Aligned_cols=130  Identities=13%  Similarity=0.048  Sum_probs=76.7

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEE--------EE---CCHHHHHHHH
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVI--------AN---RTYDRARELA  421 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v--------~n---Rt~~ka~~la  421 (616)
                      -+.|.+.+++..+...       +.+++|++|+|-|.|.+|..+|..|.+.|++|+.        +|   -+.++.+.+.
T Consensus       207 Tg~Gv~~~~~~~~~~~-------g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVavSD~~G~i~d~~Gld~~~l~~l~  279 (445)
T PRK14030        207 TGFGALYFVHQMLETK-------GIDIKGKTVAISGFGNVAWGAATKATELGAKVVTISGPDGYIYDPDGISGEKIDYML  279 (445)
T ss_pred             cHHHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHH
Confidence            4688888887766532       2478999999999999999999999999998877        66   4555532222


Q ss_pred             ---HHHC------------CcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccc--cCccEEEEEeeCCcccH
Q 007151          422 ---ETVG------------GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHAL--GHYALVFDAVYTPKITR  484 (616)
Q Consensus       422 ---~~~~------------~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l--~~~~~v~Di~Y~P~~T~  484 (616)
                         +..+            .+.++-+++   ....+||++-|+--+.-   +...  ...+  ...++|++-.-+| .|+
T Consensus       280 ~~k~~~~~~~~~~~~~~~ga~~i~~~~~---~~~~cDVliPcAl~n~I---~~~n--a~~l~~~~ak~V~EgAN~p-~t~  350 (445)
T PRK14030        280 ELRASGNDIVAPYAEKFPGSTFFAGKKP---WEQKVDIALPCATQNEL---NGED--ADKLIKNGVLCVAEVSNMG-CTA  350 (445)
T ss_pred             HHHHhcCccHHHHHhcCCCCEEcCCccc---eeccccEEeeccccccC---CHHH--HHHHHHcCCeEEEeCCCCC-CCH
Confidence               1111            111111111   12357898877643321   1100  0123  1457888888776 454


Q ss_pred             HHHH-HHHcCCeEEc
Q 007151          485 LLRE-AEESGATIVS  498 (616)
Q Consensus       485 ll~~-A~~~G~~~i~  498 (616)
                      --.+ -+++|+.+++
T Consensus       351 eA~~iL~~rGI~~vP  365 (445)
T PRK14030        351 EAIDKFIAAKQLFAP  365 (445)
T ss_pred             HHHHHHHHCCCEEeC
Confidence            3222 2356665543

>PRK11572 copper homeostasis protein CutC; Provisional

Probab=95.03  E-value=1.3  Score=45.40  Aligned_cols=146  Identities=16%  Similarity=0.179  Sum_probs=93.4

Q ss_pred             CCCHHHHHHHHHhhhhcCCCEEEEEecCCC-CCCh-hhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH---HHHHH
Q 007151           32 GESVDKMVVDMGKANASGADLVEIRLDGLK-NFNP-RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV---DVLRL  106 (616)
Q Consensus        32 ~~~~~~~~~~l~~~~~~gaD~vElRlD~l~-~~~~-~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~---~ll~~  106 (616)
                      ..+++++.    .|.+.|||-|||.-++-. ...| ...++..++..++|+.+-+|.+  ||.|-.++++..   +-++.
T Consensus         8 v~s~~~a~----~A~~~GAdRiELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR--~gdF~Ys~~E~~~M~~di~~   81 (248)
T PRK11572          8 CYSMECAL----TAQQAGADRIELCAAPKEGGLTPSLGVLKSVRERVTIPVHPIIRPR--GGDFCYSDGEFAAMLEDIAT   81 (248)
T ss_pred             ECCHHHHH----HHHHcCCCEEEEccCcCCCCcCCCHHHHHHHHHhcCCCeEEEEecC--CCCCCCCHHHHHHHHHHHHH
Confidence            44555444    456789999999998753 3333 2346666677799999999975  677878875543   33566


Q ss_pred             HHHhCCcEEEE-----EcccchhhhHHhhccCCCCceEEEEecc-CCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 007151          107 AMELGADYIDV-----ELQVAREFNDSIRGKKPEKCKVIVSSHN-YQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (616)
Q Consensus       107 ~~~~g~dyvDI-----El~~~~~~~~~l~~~~~~~~kiI~S~Hd-f~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~  180 (616)
                      +.+.|+|.|=+     +-..+.+..+++... .++.++  .||- |+.+++.   .+-++.+.++|.|=+==..-+.+..
T Consensus        82 ~~~~GadGvV~G~L~~dg~vD~~~~~~Li~~-a~~~~v--TFHRAfD~~~d~---~~al~~l~~lG~~rILTSGg~~~a~  155 (248)
T PRK11572         82 VRELGFPGLVTGVLDVDGHVDMPRMRKIMAA-AGPLAV--TFHRAFDMCANP---LNALKQLADLGVARILTSGQQQDAE  155 (248)
T ss_pred             HHHcCCCEEEEeeECCCCCcCHHHHHHHHHH-hcCCce--EEechhhccCCH---HHHHHHHHHcCCCEEECCCCCCCHH
Confidence            66788887644     334455666677643 234444  5676 8888754   4567777788855433334445666


Q ss_pred             HHHHHHHHh
Q 007151          181 DVARVFQIT  189 (616)
Q Consensus       181 D~~~ll~~~  189 (616)
                      |.+..++-+
T Consensus       156 ~g~~~L~~l  164 (248)
T PRK11572        156 QGLSLIMEL  164 (248)
T ss_pred             HHHHHHHHH
Confidence            766666543

>PLN02214 cinnamoyl-CoA reductase

Probab=95.00  E-value=0.052  Score=58.06  Aligned_cols=72  Identities=22%  Similarity=0.137  Sum_probs=48.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHHHC---Cc--c--cchhc---ccccCCCCccEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVG---GH--A--LSLAD---LENFNPEDGMILA  446 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~l-a~~~~---~~--~--~~~~~---l~~~~~~~~divI  446 (616)
                      +++++++|+|+ |.+|+.++..|.+.|++|+++.|+.++.... ...+.   ..  .  .++.+   +.+ ...+.|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA-AIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH-HHhcCCEEE
Confidence            56789999998 8999999999999999999999986643221 11221   11  1  12222   222 234589999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      ++++.
T Consensus        87 h~A~~   91 (342)
T PLN02214         87 HTASP   91 (342)
T ss_pred             EecCC
Confidence            99875

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.04  Score=55.44  Aligned_cols=43  Identities=30%  Similarity=0.463  Sum_probs=36.1

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHH
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETV  424 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~  424 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+. ++.+++.+..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~   46 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY   46 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc
Confidence            57999997 7999999999999999999999986 5555555544

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.00  E-value=0.04  Score=58.13  Aligned_cols=67  Identities=24%  Similarity=0.280  Sum_probs=48.0

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~---~l~~~~~~~~divInat~~  451 (616)
                      +++|+|| |-+|+.++.+|.+.|++|+++.|+.+++..+.. .+.+.  .++.   ++.. ...++|.||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPP-SFKGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHH-HHCCCCEEEECCCC
Confidence            6999997 889999999999999999999999876654432 22222  1332   2222 34568999998753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=94.98  E-value=0.024  Score=60.27  Aligned_cols=37  Identities=24%  Similarity=0.161  Sum_probs=33.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +++++++||+|+ |++|+.++..|.+.|++|+++.|+.
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            567899999997 8899999999999999999988864

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.95  E-value=0.03  Score=59.13  Aligned_cols=34  Identities=38%  Similarity=0.449  Sum_probs=31.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ++++.|+|+|-+|++++..|.+.|.+|++++|+.
T Consensus         4 ~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAILGAGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4689999999999999999999999999999975

>PLN02688 pyrroline-5-carboxylate reductase

Probab=94.92  E-value=0.05  Score=55.97  Aligned_cols=65  Identities=22%  Similarity=0.236  Sum_probs=48.2

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC----eEEEE-ECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA----RVVIA-NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~----~V~v~-nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ++.+||.|.||.+++..|.+.|.    +|+++ +|+.++++.+.+ .+....  .+..+ ...++|+||-+++.
T Consensus         2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~-~g~~~~--~~~~e-~~~~aDvVil~v~~   71 (266)
T PLN02688          2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS-LGVKTA--ASNTE-VVKSSDVIILAVKP   71 (266)
T ss_pred             eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH-cCCEEe--CChHH-HHhcCCEEEEEECc
Confidence            58899999999999999999987    89999 999999877654 443221  11111 13457999988863

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=94.89  E-value=0.032  Score=56.19  Aligned_cols=63  Identities=29%  Similarity=0.450  Sum_probs=45.4

Q ss_pred             chhHHHHHHHHHHCCCeEEEEECCHHH----HHHHHHHHCCcc--cchh---ccccc------CC-CCccEEEEcCCCC
Q 007151          390 GGAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHA--LSLA---DLENF------NP-EDGMILANTTSIG  452 (616)
Q Consensus       390 GGagrAia~~L~~~G~~V~v~nRt~~k----a~~la~~~~~~~--~~~~---~l~~~------~~-~~~divInat~~g  452 (616)
                      +|+|+++|.+|++.|++|++.+|+.++    .++++++.+...  +++.   ++..+      .. +..|++||+++..
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~   84 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS   84 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            599999999999999999999999988    455566555433  2221   11111      23 6789999998754

...

>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed

Probab=94.89  E-value=0.86  Score=45.51  Aligned_cols=119  Identities=19%  Similarity=0.224  Sum_probs=75.3

Q ss_pred             EEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 007151           26 ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR  105 (616)
Q Consensus        26 Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~  105 (616)
                      +...+...+.+++...++.+.+.|+.++|+|.+--   +..+.++.+++..+.|+++=.     |...  +. +   -++
T Consensus        12 ~~~v~r~~~~~~~~~~~~a~~~gGi~~iEvt~~~~---~~~~~i~~l~~~~~~~~~iGa-----GTV~--~~-~---~~~   77 (206)
T PRK09140         12 LIAILRGITPDEALAHVGALIEAGFRAIEIPLNSP---DPFDSIAALVKALGDRALIGA-----GTVL--SP-E---QVD   77 (206)
T ss_pred             EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCCc---cHHHHHHHHHHHcCCCcEEeE-----EecC--CH-H---HHH
Confidence            44458889999999999999999999999996543   334567777766554544321     1111  12 2   346


Q ss_pred             HHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       106 ~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                      .+++.|++++=.=- .+.+..+..   +..+..++.+-|    ||  +|    +.++.+.|+|++|+
T Consensus        78 ~a~~aGA~fivsp~-~~~~v~~~~---~~~~~~~~~G~~----t~--~E----~~~A~~~Gad~vk~  130 (206)
T PRK09140         78 RLADAGGRLIVTPN-TDPEVIRRA---VALGMVVMPGVA----TP--TE----AFAALRAGAQALKL  130 (206)
T ss_pred             HHHHcCCCEEECCC-CCHHHHHHH---HHCCCcEEcccC----CH--HH----HHHHHHcCCCEEEE
Confidence            67888999874321 122222222   235667788876    43  23    35566789999997

>PLN02477 glutamate dehydrogenase

Probab=94.88  E-value=0.21  Score=54.97  Aligned_cols=130  Identities=21%  Similarity=0.293  Sum_probs=81.4

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEECC----------HHHHHHHH
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT----------YDRARELA  421 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nRt----------~~ka~~la  421 (616)
                      -+.|...+++..++..       +.+++|++++|.|.|.+|+.++..|.+.|++|+ |.+.+          .+...+..
T Consensus       185 Tg~Gv~~~~~~~~~~~-------g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~G~iy~~~GLD~~~L~~~k  257 (410)
T PLN02477        185 TGRGVVFATEALLAEH-------GKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDITGAVKNENGLDIPALRKHV  257 (410)
T ss_pred             chHHHHHHHHHHHHHc-------CCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCeEECCCCCCHHHHHHHH
Confidence            3678888887765431       247899999999999999999999999999877 77776          55554433


Q ss_pred             HHHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHH-HHcC
Q 007151          422 ETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA-EESG  493 (616)
Q Consensus       422 ~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A-~~~G  493 (616)
                      ++-+.       ..++-+++   ...++|++|-|+--+.-   ++...+  .+ ..+++++-.-+|- |+--.+. +++|
T Consensus       258 ~~~g~l~~~~~a~~i~~~e~---l~~~~DvliP~Al~~~I---~~~na~--~i-~ak~I~egAN~p~-t~ea~~~L~~rG  327 (410)
T PLN02477        258 AEGGGLKGFPGGDPIDPDDI---LVEPCDVLIPAALGGVI---NKENAA--DV-KAKFIVEAANHPT-DPEADEILRKKG  327 (410)
T ss_pred             HhcCchhccccceEecCccc---eeccccEEeeccccccC---CHhHHH--Hc-CCcEEEeCCCCCC-CHHHHHHHHHCC
Confidence            33221       11111111   12368999987753321   111111  12 4578888888886 6543333 4677


Q ss_pred             CeEEcc
Q 007151          494 ATIVSG  499 (616)
Q Consensus       494 ~~~i~G  499 (616)
                      +.+++.
T Consensus       328 I~~~PD  333 (410)
T PLN02477        328 VVVLPD  333 (410)
T ss_pred             cEEECh
Confidence            777653

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.88  E-value=0.14  Score=57.07  Aligned_cols=32  Identities=41%  Similarity=0.468  Sum_probs=29.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +++|+|.|++|+++|+.|.+.|++|+++++..
T Consensus         2 ~v~viG~G~sG~s~a~~l~~~G~~V~~~D~~~   33 (459)
T PRK02705          2 IAHVIGLGRSGIAAARLLKAQGWEVVVSDRND   33 (459)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            68999999999999999999999999999753

>PRK08223 hypothetical protein; Validated

Probab=94.85  E-value=0.045  Score=57.29  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=34.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDR  416 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~k  416 (616)
                      .+++++|+|+|+||.|..++..|+..|+ ++++++.+.=.
T Consensus        24 kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~Ve   63 (287)
T PRK08223         24 RLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDVFE   63 (287)
T ss_pred             HHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence            3678899999999999999999999999 99999986433

>PRK06545 prephenate dehydrogenase; Validated

Probab=94.77  E-value=0.052  Score=58.72  Aligned_cols=202  Identities=17%  Similarity=0.182  Sum_probs=106.2

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccc--hhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~--~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      +++.|+|.|-+|.+++.+|.+.|.++.+++|+.++.+.. ...+....+  ..++.+ ...++|+||-|+|.......- 
T Consensus         1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~-~a~~~~~~~~~~~~~~~-~~~~aDlVilavP~~~~~~vl-   77 (359)
T PRK06545          1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLA-RALGFGVIDELAADLQR-AAAEADLIVLAVPVDATAALL-   77 (359)
T ss_pred             CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHH-HHhcCCCCcccccCHHH-HhcCCCEEEEeCCHHHHHHHH-
Confidence            368999999999999999999999888888876653332 222222111  122222 245689999999975321100 


Q ss_pred             CccccccccCccEEEEEeeCCcccHHHHHHHH---cCCeEEccHHHHHH--HHH--HHHHHHcCCC---CC--CchHHHH
Q 007151          460 TPIPKHALGHYALVFDAVYTPKITRLLREAEE---SGATIVSGLEMFIG--QAY--EQYERFTGLP---GK--MNAPHLY  527 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~---~G~~~i~Gl~MLv~--Qa~--~qf~lwtG~~---~p--~~~~~l~  527 (616)
                      ..+....+.+..++.|+.-.+  ...++.+++   .+..++.|=.|.--  .+.  ..-.+|.|..   .|  .......
T Consensus        78 ~~l~~~~l~~~~ivtDv~SvK--~~i~~~~~~~~~~~~~~ig~HPMaG~e~sG~~aa~~~lf~g~~~il~~~~~~~~~~~  155 (359)
T PRK06545         78 AELADLELKPGVIVTDVGSVK--GAILAEAEALLGDLIRFVGGHPMAGSHKSGVAAARADLFENAPWVLTPDDHTDPDAV  155 (359)
T ss_pred             HHHhhcCCCCCcEEEeCcccc--HHHHHHHHHhcCCCCeEEeeCCcCcCchhhHHHhcHHHHCCCcEEEecCCCCCHHHH
Confidence            011111245668888987653  233444544   35677777666421  111  1224555541   11  1112112


Q ss_pred             HHHHHHHhhcccccceecccccCCccchhchhhhhhcCceeehhhHHHHHHHHHHHhhhhccceeeEeeecccccc
Q 007151          528 KFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEASLFIFFFGQKYKR  603 (616)
Q Consensus       528 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  603 (616)
                      +.+.   .+.+.+          |....- +=++.|.+..-+.--.-||+...|-.. ...+.....-+-++-|+-
T Consensus       156 ~~v~---~l~~~l----------Ga~~v~-~~~~~HD~~~A~vshlPh~ia~al~~~-~~~~~~~~~~la~~gfrd  216 (359)
T PRK06545        156 AELK---DLLSGT----------GAKFVV-LDAEEHDRAVALVSHLPHILASSLAAR-LAGEHPLALRLAAGGFRD  216 (359)
T ss_pred             HHHH---HHHHHc----------CCEEEE-CCHHHHhHHHhHhccHHHHHHHHHHHh-hccCchHHHhhhcccccC
Confidence            2222   223322          332211 115667777777777788877655222 222223333445555553

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=94.74  E-value=0.078  Score=60.09  Aligned_cols=39  Identities=28%  Similarity=0.346  Sum_probs=36.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      ++|.|||+|-||+.+|..|+..|++|++++|+.++++..
T Consensus         8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~   46 (507)
T PRK08268          8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAA   46 (507)
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            679999999999999999999999999999999987774

>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain

Probab=94.65  E-value=3  Score=43.45  Aligned_cols=202  Identities=15%  Similarity=0.114  Sum_probs=119.8

Q ss_pred             HHhhhhcCCCEEEEEecCC-------CCCChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCCc
Q 007151           42 MGKANASGADLVEIRLDGL-------KNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGAD  113 (616)
Q Consensus        42 l~~~~~~gaD~vElRlD~l-------~~~~~~~~l~~l~~~-~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~d  113 (616)
                      ++...+.|+|.||.=----       ...++.+.++.+++. .+.++..-.|..+.=|.-+...+-..+.++.+.+.|++
T Consensus        27 a~~L~~~Gv~~iE~G~~a~~~~~~~~~~~~~~e~i~~~~~~~~~~~l~~~~r~~~~~~~~~~p~~~~~~di~~~~~~g~~  106 (275)
T cd07937          27 AEALDEAGFFSLEVWGGATFDVCMRFLNEDPWERLRELRKAMPNTPLQMLLRGQNLVGYRHYPDDVVELFVEKAAKNGID  106 (275)
T ss_pred             HHHHHHcCCCEEEccCCcchhhhccccCCCHHHHHHHHHHhCCCCceehhcccccccCccCCCcHHHHHHHHHHHHcCCC
Confidence            3344457999999974321       122444566666643 35778888887654444333444566778889999999


Q ss_pred             EEEEEcccch-h-hhHHhhccCCCCceEEEEecc-CCCCCCHHHHHHHHHHHHHcCCCEEEEEeec--CCHhHHHHHHHH
Q 007151          114 YIDVELQVAR-E-FNDSIRGKKPEKCKVIVSSHN-YQYTPSVEDLSNLVARIQASGADIVKFATTA--LDITDVARVFQI  188 (616)
Q Consensus       114 yvDIEl~~~~-~-~~~~l~~~~~~~~kiI~S~Hd-f~~tP~~~el~~~~~~~~~~gaDIvKia~~~--~s~~D~~~ll~~  188 (616)
                      .|-|-....+ + ..+.+...+..+.++..+... +....+.+.+.+..+++.+.|+|.+-++=+.  -+++++.++.+.
T Consensus       107 ~iri~~~~~~~~~~~~~i~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~  186 (275)
T cd07937         107 IFRIFDALNDVRNLEVAIKAVKKAGKHVEGAICYTGSPVHTLEYYVKLAKELEDMGADSICIKDMAGLLTPYAAYELVKA  186 (275)
T ss_pred             EEEEeecCChHHHHHHHHHHHHHCCCeEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCHHHHHHHHHH
Confidence            9887544321 1 222222233446666654432 2222356789999999999999999988554  368888888887


Q ss_pred             hhcC-CCCEEEE----ecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhc
Q 007151          189 TVHS-QVPIIGL----VMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  246 (616)
Q Consensus       189 ~~~~-~~plI~i----~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~f  246 (616)
                      +.+. +.|+ .+    ++| ++...-+.+-..|....-+++.. -.-..|+.+++++...++.
T Consensus       187 l~~~~~~~l-~~H~Hnd~G-lA~aN~laA~~aGa~~vd~sv~G-lG~~aGN~~~E~l~~~L~~  246 (275)
T cd07937         187 LKKEVGLPI-HLHTHDTSG-LAVATYLAAAEAGVDIVDTAISP-LSGGTSQPSTESMVAALRG  246 (275)
T ss_pred             HHHhCCCeE-EEEecCCCC-hHHHHHHHHHHhCCCEEEEeccc-ccCCcCChhHHHHHHHHHc
Confidence            6542 4443 22    122 22233333334465444455443 1244899999888866543

This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.60  E-value=0.041  Score=54.63  Aligned_cols=36  Identities=19%  Similarity=0.404  Sum_probs=33.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++++
T Consensus        18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4678899999999999999999999999 89999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.58  E-value=0.12  Score=57.32  Aligned_cols=72  Identities=25%  Similarity=0.252  Sum_probs=55.6

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc-----cchhcccccCCCCccEEEEcCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA-----LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~-----~~~~~l~~~~~~~~divInat~  450 (616)
                      ...++++|+|+|..|+.++..|.+.|.+|+++++++++.+.+.+.+.. ..     .+.+.+.+....++|.+|.+++
T Consensus       229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        229 KPVKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            456899999999999999999999999999999999998888876522 21     1222233334567899998777

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=94.56  E-value=0.029  Score=61.03  Aligned_cols=79  Identities=18%  Similarity=0.207  Sum_probs=55.1

Q ss_pred             CcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          381 GKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       381 ~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      .+++.|+| .|.+|.+++.+|.+.|.+|++++|+...             +.+   + ...++|+||-|+|.......- 
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~~-------------~~~---~-~~~~aDlVilavP~~~~~~~~-  159 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDWD-------------RAE---D-ILADAGMVIVSVPIHLTEEVI-  159 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcch-------------hHH---H-HHhcCCEEEEeCcHHHHHHHH-
Confidence            47899999 8999999999999999999999996320             011   1 123579999999976421100 


Q ss_pred             CccccccccCccEEEEEeeC
Q 007151          460 TPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~Y~  479 (616)
                      ..+.  .++++.++.|+...
T Consensus       160 ~~l~--~l~~~~iv~Dv~Sv  177 (374)
T PRK11199        160 ARLP--PLPEDCILVDLTSV  177 (374)
T ss_pred             HHHh--CCCCCcEEEECCCc
Confidence            0011  15677899999653

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.53  E-value=0.091  Score=53.06  Aligned_cols=47  Identities=21%  Similarity=0.216  Sum_probs=37.4

Q ss_pred             cccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH-HHHHHH
Q 007151          375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD-RARELA  421 (616)
Q Consensus       375 ~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~-ka~~la  421 (616)
                      ....+++++|||+|+|.+|..=+..|.+.|++|+|++.+.. ..++++
T Consensus        19 i~l~~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~   66 (223)
T PRK05562         19 ISLLSNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK   66 (223)
T ss_pred             eEEECCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH
Confidence            34567799999999999998888899999999999987642 334444

>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase

Probab=94.51  E-value=0.41  Score=47.27  Aligned_cols=130  Identities=18%  Similarity=0.141  Sum_probs=84.2

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhC-CCcEEEEeccCCCCCCCCCCHHHHHHH
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES-PVPTLFTYRPIWEGGQYDGDENERVDV  103 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~-~~PiI~T~Rt~~eGG~~~~~~e~~~~l  103 (616)
                      ++||.+-..+.++++.-++.. ..|.|+||+-.-++.... .+.++.+++.. +.++++..... +-|       .+  .
T Consensus         1 ~l~~alD~~~~~~a~~~~~~l-~~~v~~iev~~~l~~~~g-~~~i~~l~~~~~~~~i~~d~k~~-d~~-------~~--~   68 (206)
T TIGR03128         1 KLQLALDLLDIEEALELAEKV-ADYVDIIEIGTPLIKNEG-IEAVKEMKEAFPDRKVLADLKTM-DAG-------EY--E   68 (206)
T ss_pred             CeEEEecCCCHHHHHHHHHHc-ccCeeEEEeCCHHHHHhC-HHHHHHHHHHCCCCEEEEEEeec-cch-------HH--H
Confidence            378899999999999888775 788999999644543332 34677887663 56777766543 111       11  3


Q ss_pred             HHHHHHhCCcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          104 LRLAMELGADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       104 l~~~~~~g~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                      ++.+.+.|+|+|=+-...+.....++.. .++.+.++++..++.. |     ..+..+.+.+.|+|++|+
T Consensus        69 ~~~~~~~Gad~i~vh~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~-t-----~~~~~~~~~~~g~d~v~~  132 (206)
T TIGR03128        69 AEQAFAAGADIVTVLGVADDATIKGAVKAAKKHGKEVQVDLINVK-D-----KVKRAKELKELGADYIGV  132 (206)
T ss_pred             HHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHcCCEEEEEecCCC-C-----hHHHHHHHHHcCCCEEEE
Confidence            5677889999987666554322233322 2346888888766431 2     234445556779999988

at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.49  E-value=0.11  Score=55.17  Aligned_cols=72  Identities=19%  Similarity=0.247  Sum_probs=52.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cch-hcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSL-ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-------~~~-~~l~~~~~~~~divInat~~  451 (616)
                      .++.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++..-.       +.. .+.+  ...++|+||.|++.
T Consensus         4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvitaG~   81 (312)
T cd05293           4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVTAGA   81 (312)
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEECCCC
Confidence            489999999999999999998886  79999998888877776654211       111 1222  24568999999887


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      .-.|
T Consensus        82 ~~k~   85 (312)
T cd05293          82 RQNE   85 (312)
T ss_pred             CCCC
Confidence            5444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=94.48  E-value=0.026  Score=60.50  Aligned_cols=137  Identities=21%  Similarity=0.306  Sum_probs=88.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccc--hhcc----cccCCCCccEEEEcCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALS--LADL----ENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~--~~~l----~~~~~~~~divInat~~gm  453 (616)
                      +++||++|+|-+++-++..|++.+- +|+|..|+...++++++..+.+++.  +.+-    .. .....|+++.-+|...
T Consensus         2 ~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~-~v~~~D~viSLlP~t~   80 (445)
T KOG0172|consen    2 KKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRK-EVKPLDLVISLLPYTF   80 (445)
T ss_pred             CcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHh-hhcccceeeeeccchh
Confidence            4789999999999999999998875 9999999999999999877755543  3221    12 3456799998888766


Q ss_pred             CCCCCCCccccccccCccEEEEEeeC-CcccHHHHHHHHcCCeEE------ccHHHHH-----------HHHHHHHHHHc
Q 007151          454 QPKVDETPIPKHALGHYALVFDAVYT-PKITRLLREAEESGATIV------SGLEMFI-----------GQAYEQYERFT  515 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~Y~-P~~T~ll~~A~~~G~~~i------~Gl~MLv-----------~Qa~~qf~lwt  515 (616)
                      +|...     ..++....-++--.|. |.--.|-+.|...|..+.      .|++.+.           -|-+.+|.-++
T Consensus        81 h~lVa-----K~~i~~~~~~vtsSyv~pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~hgg~i~sf~syc  155 (445)
T KOG0172|consen   81 HPLVA-----KGCIITKEDSVTSSYVDPELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHEHGGKIKSFKSYC  155 (445)
T ss_pred             hHHHH-----HHHHHhhcccccccccCHHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHHhhcceeeehhhhc
Confidence            55322     2223333333444553 322333334445565544      5776653           23356777777


Q ss_pred             CC-CCCCch
Q 007151          516 GL-PGKMNA  523 (616)
Q Consensus       516 G~-~~p~~~  523 (616)
                      |- ++|...
T Consensus       156 Gglpape~s  164 (445)
T KOG0172|consen  156 GGLPAPERS  164 (445)
T ss_pred             CCccChhhC
Confidence            65 555443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=94.48  E-value=0.068  Score=56.38  Aligned_cols=115  Identities=20%  Similarity=0.196  Sum_probs=81.3

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh-----cccccCCCCccEEEEcCCCCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA-----DLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~-----~l~~~~~~~~divInat~~gm~p  455 (616)
                      ...+|.|| |-+|+-+|.+|+..|.+-.+.+|+.+|...+...++.+...+.     -++. .....++|+||++.-.. 
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~-~~~~~~VVlncvGPyt~-   84 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEA-MASRTQVVLNCVGPYTR-   84 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHH-HHhcceEEEeccccccc-
Confidence            46899999 7799999999999999889999999999999999987553322     1222 34568999999985322 


Q ss_pred             CCCCCccccccccCccEEEEEeeCCc-----ccHHHHHHHHcCCeEEccH
Q 007151          456 KVDETPIPKHALGHYALVFDAVYTPK-----ITRLLREAEESGATIVSGL  500 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~~v~Di~Y~P~-----~T~ll~~A~~~G~~~i~Gl  500 (616)
                        ...|+-..+...+.--+|+.=...     ....-++|++.|+.+++|.
T Consensus        85 --~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~c  132 (382)
T COG3268          85 --YGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGC  132 (382)
T ss_pred             --cccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccC
Confidence              224554556666665667653211     1222467778899998754

>PLN02858 fructose-bisphosphate aldolase

Probab=94.46  E-value=0.13  Score=64.68  Aligned_cols=112  Identities=19%  Similarity=0.095  Sum_probs=73.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .+++.+||.|-||.+++..|.+.|++|+++||+.++++.+++.......+..++    ..++|+|+-+.+-.-.  ....
T Consensus       324 ~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~----~~~aDvVi~~V~~~~~--v~~V  397 (1378)
T PLN02858        324 VKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEV----AKDVDVLVIMVANEVQ--AENV  397 (1378)
T ss_pred             CCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHH----HhcCCEEEEecCChHH--HHHH
Confidence            378999999999999999999999999999999999988876421111122222    2457999988873210  0000


Q ss_pred             cccc----ccccCccEEEEEeeC-CcccH-HHHHHHH--cCCeEEc
Q 007151          461 PIPK----HALGHYALVFDAVYT-PKITR-LLREAEE--SGATIVS  498 (616)
Q Consensus       461 pi~~----~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~--~G~~~i~  498 (616)
                      .+..    ..+.++.+++|+.-. |..+. +-+.+++  +|+.+++
T Consensus       398 l~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lD  443 (1378)
T PLN02858        398 LFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVD  443 (1378)
T ss_pred             HhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEE
Confidence            0110    124567899999875 44443 4444556  6776654

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.44  E-value=0.08  Score=55.86  Aligned_cols=70  Identities=26%  Similarity=0.392  Sum_probs=52.1

Q ss_pred             EEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cc-hhcccccCCCCccEEEEcCCCCC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LS-LADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-------~~-~~~l~~~~~~~~divInat~~gm  453 (616)
                      +.|+|+|++|.++++.|+..|.  ++++++++.++++..+.++..-.       +. ..+.+  ...++|++|.|++...
T Consensus         1 i~iiGaG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~--~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYA--DAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHH--HhCCCCEEEEcCCCCC
Confidence            4699999999999999999985  79999999999988887764211       01 01122  3466899999998654


Q ss_pred             CC
Q 007151          454 QP  455 (616)
Q Consensus       454 ~p  455 (616)
                      .|
T Consensus        79 ~~   80 (300)
T cd00300          79 KP   80 (300)
T ss_pred             CC
Confidence            33

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK06217 hypothetical protein; Validated

Probab=94.43  E-value=0.016  Score=56.30  Aligned_cols=28  Identities=11%  Similarity=-0.022  Sum_probs=25.1

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +|+++|+||+||||+++.|++.++-+++
T Consensus         3 ~I~i~G~~GsGKSTla~~L~~~l~~~~~   30 (183)
T PRK06217          3 RIHITGASGSGTTTLGAALAERLDIPHL   30 (183)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHcCCcEE
Confidence            4889999999999999999999987643

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.41  E-value=0.055  Score=52.71  Aligned_cols=62  Identities=19%  Similarity=0.217  Sum_probs=41.4

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhccccc--CCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~--~~~~~divInat~~g  452 (616)
                      +++|+|+ ||+|++++..|.+. ++|++.+|+.+.       +.....+.+++.++  .....|++||+++.+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-------VQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-------eEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            6899998 69999999999988 999999997531       10011111111110  234689999999864

>PLN02858 fructose-bisphosphate aldolase

Probab=94.41  E-value=0.094  Score=66.00  Aligned_cols=110  Identities=21%  Similarity=0.177  Sum_probs=72.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      .+++-+||.|-||..++..|.+.|++|+++||+.++++++++. +.... +..++    ..++|+||-+.+-+-.  ..+
T Consensus         4 ~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~~~~s~~e~----a~~advVi~~l~~~~~--v~~   76 (1378)
T PLN02858          4 AGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCEL-GGHRCDSPAEA----AKDAAALVVVLSHPDQ--VDD   76 (1378)
T ss_pred             CCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc-CCeecCCHHHH----HhcCCEEEEEcCChHH--HHH
Confidence            4679999999999999999999999999999999999998864 33221 22222    2347899887764311  111


Q ss_pred             Ccccc----ccccCccEEEEEeeC-CcccH-HHHHHHHcC--CeEE
Q 007151          460 TPIPK----HALGHYALVFDAVYT-PKITR-LLREAEESG--ATIV  497 (616)
Q Consensus       460 ~pi~~----~~l~~~~~v~Di~Y~-P~~T~-ll~~A~~~G--~~~i  497 (616)
                      ..+..    ..+.++.+++|+... |..+. +-+.++++|  +..+
T Consensus        77 V~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g~~~~~l  122 (1378)
T PLN02858         77 VFFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLV  122 (1378)
T ss_pred             HHhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcCCceEEE
Confidence            11111    124567899999875 44433 334445677  5444

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=94.40  E-value=0.086  Score=53.56  Aligned_cols=43  Identities=28%  Similarity=0.507  Sum_probs=38.0

Q ss_pred             EEEEEcc-chhHHHHHHHHHH----CCCeEEEEECCHHHHHHHHHHHC
Q 007151          383 LFVVIGA-GGAGKALAYGAKA----KGARVVIANRTYDRARELAETVG  425 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~----~G~~V~v~nRt~~ka~~la~~~~  425 (616)
                      .++|+|+ ||+|++++..|++    .|++|++++|+.++++++++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~   49 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIG   49 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHH
Confidence            5899998 6999999999997    68999999999999988877663

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>cd00945 Aldolase_Class_I Class I aldolases

Probab=94.34  E-value=3.7  Score=39.46  Aligned_cols=152  Identities=16%  Similarity=0.147  Sum_probs=89.3

Q ss_pred             CHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhC---CCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHh
Q 007151           34 SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES---PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL  110 (616)
Q Consensus        34 ~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~---~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~  110 (616)
                      |.+.+...++...+.|+|.+++--         +.++.+++..   +.|+++.+-...  +.  ...++-.+..+.+.+.
T Consensus        11 d~~~~~~~~~~~~~~gv~gi~~~g---------~~i~~~~~~~~~~~~~v~~~v~~~~--~~--~~~~~~~~~a~~a~~~   77 (201)
T cd00945          11 TLEDIAKLCDEAIEYGFAAVCVNP---------GYVRLAADALAGSDVPVIVVVGFPT--GL--TTTEVKVAEVEEAIDL   77 (201)
T ss_pred             CHHHHHHHHHHHHHhCCcEEEECH---------HHHHHHHHHhCCCCCeEEEEecCCC--CC--CcHHHHHHHHHHHHHc
Confidence            566677777777788999999875         2344444332   578887655421  11  2246777888999999


Q ss_pred             CCcEEEEEcccc-------h---hhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecC---
Q 007151          111 GADYIDVELQVA-------R---EFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTAL---  177 (616)
Q Consensus       111 g~dyvDIEl~~~-------~---~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~---  177 (616)
                      |+|.+.+-....       +   +.++++...-+.+..+++ |+....+.+.+++.+..+.+...|+|.+|......   
T Consensus        78 Gad~i~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~pv~i-y~~p~~~~~~~~~~~~~~~~~~~g~~~iK~~~~~~~~~  156 (201)
T cd00945          78 GADEIDVVINIGSLKEGDWEEVLEEIAAVVEAADGGLPLKV-ILETRGLKTADEIAKAARIAAEAGADFIKTSTGFGGGG  156 (201)
T ss_pred             CCCEEEEeccHHHHhCCCHHHHHHHHHHHHHHhcCCceEEE-EEECCCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCC
Confidence            999999864431       1   333344432112444443 44433343456677776667788999999876422   


Q ss_pred             -CHhHHHHHHHHhhcCCCCEEEEe
Q 007151          178 -DITDVARVFQITVHSQVPIIGLV  200 (616)
Q Consensus       178 -s~~D~~~ll~~~~~~~~plI~i~  200 (616)
                       +.++..++.+... .+.|+++.+
T Consensus       157 ~~~~~~~~i~~~~~-~~~~v~~~g  179 (201)
T cd00945         157 ATVEDVKLMKEAVG-GRVGVKAAG  179 (201)
T ss_pred             CCHHHHHHHHHhcc-cCCcEEEEC
Confidence             4455544433321 134555443

The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=94.33  E-value=0.053  Score=58.89  Aligned_cols=105  Identities=15%  Similarity=0.057  Sum_probs=71.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ..++.|+|. |.+|+.++.+|.+. |.+|+.++|..+.              ..+..+ ...++|+||-|+|+......-
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------~~~~~~-~v~~aDlVilavPv~~~~~~l   68 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------SLDPAT-LLQRADVLIFSAPIRHTAALI   68 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------cCCHHH-HhcCCCEEEEeCCHHHHHHHH
Confidence            568999999 99999999999975 6699999885221              111111 234689999999986432100


Q ss_pred             CCccccc--cccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHH
Q 007151          459 ETPIPKH--ALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       459 ~~pi~~~--~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      + .+...  .++++.++.|+...  .+..++.+.+.++.++.|=.|.
T Consensus        69 ~-~l~~~~~~l~~~~iVtDVgSv--K~~i~~~~~~~~~~fVG~HPMa  112 (370)
T PRK08818         69 E-EYVALAGGRAAGQLWLDVTSI--KQAPVAAMLASQAEVVGLHPMT  112 (370)
T ss_pred             H-HHhhhhcCCCCCeEEEECCCC--cHHHHHHHHhcCCCEEeeCCCC
Confidence            0 01111  25778899999875  4556677777777788877776

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=94.31  E-value=0.087  Score=55.11  Aligned_cols=39  Identities=31%  Similarity=0.404  Sum_probs=35.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      +++|+|+|.+|.+++..|++.|.+|++++| .++.+++.+
T Consensus         2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~   40 (305)
T PRK12921          2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE   40 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence            689999999999999999999999999999 777777654

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.28  E-value=0.1  Score=54.32  Aligned_cols=37  Identities=27%  Similarity=0.336  Sum_probs=34.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR  418 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~  418 (616)
                      +++.|+|+|-+|.+++..++..|.+|++++++.++.+
T Consensus         4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~   40 (282)
T PRK05808          4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVD   40 (282)
T ss_pred             cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHH
Confidence            5799999999999999999999999999999998875

>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.27  E-value=0.24  Score=54.89  Aligned_cols=35  Identities=26%  Similarity=0.287  Sum_probs=31.7

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +.+++++|+|.|+.|++++..|.+.|++|++.+..
T Consensus         4 ~~~~~i~v~G~G~sG~s~~~~l~~~G~~v~~~D~~   38 (438)
T PRK03806          4 YQGKKVVIIGLGLTGLSCVDFFLARGVTPRVIDTR   38 (438)
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHHCCCeEEEEcCC
Confidence            45789999999999999999999999999999864

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.25  E-value=0.098  Score=55.58  Aligned_cols=41  Identities=22%  Similarity=0.303  Sum_probs=37.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.+..+.+.+.
T Consensus         2 kI~IiGaGa~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~   42 (326)
T PRK14620          2 KISILGAGSFGTAIAIALSSKKISVNLWGRNHTTFESINTK   42 (326)
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc
Confidence            58999999999999999999999999999999888877653

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.20  E-value=0.082  Score=55.44  Aligned_cols=72  Identities=21%  Similarity=0.361  Sum_probs=44.5

Q ss_pred             EEEEccc-hhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHC----Cccc---------chhc---ccc-cCCCCccE
Q 007151          384 FVVIGAG-GAGKALAYGAKAKGA-RVVIANRTYDRARELAETVG----GHAL---------SLAD---LEN-FNPEDGMI  444 (616)
Q Consensus       384 vlVlGAG-GagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~----~~~~---------~~~~---l~~-~~~~~~di  444 (616)
                      |||+||| -+|+.++.+|.+.+. +|++++|+..+.-.+..++.    ...+         ++.|   +.. +...++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            6999996 589999999999998 89999999999988888772    1111         2211   111 12237899


Q ss_pred             EEEcCCCCCCC
Q 007151          445 LANTTSIGMQP  455 (616)
Q Consensus       445 vInat~~gm~p  455 (616)
                      |++++..-..|
T Consensus        81 VfHaAA~KhVp   91 (293)
T PF02719_consen   81 VFHAAALKHVP   91 (293)
T ss_dssp             EEE------HH
T ss_pred             EEEChhcCCCC
Confidence            99999865444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.18  E-value=0.062  Score=49.56  Aligned_cols=34  Identities=26%  Similarity=0.554  Sum_probs=30.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      +++|+|+|+||.|..++..|+..|+ ++++++.+.
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence            5799999999999999999999999 999999864

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.18  E-value=0.12  Score=55.69  Aligned_cols=71  Identities=23%  Similarity=0.297  Sum_probs=52.2

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cch---hcccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~---~~l~~~~~~~~divInat~~  451 (616)
                      .+++|+|.|+|++|.+++..++..|++|+++.++.++..+++++++... ++.   +++.. ....+|+++++++.
T Consensus       183 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~-~~~~~D~vid~~g~  257 (360)
T PLN02586        183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA-AIGTMDYIIDTVSA  257 (360)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh-hcCCCCEEEECCCC
Confidence            4789999999999999999999999998888877777677777777532 221   12222 12357999999873

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	616
2gpt_A	523	Crystal Structure Of Arabidopsis Dehydroquinate Deh		0.0
2o7q_A	523	Crystal Structure Of The A. Thaliana Dhq-Dehydroshi		0.0
2egg_A	297	Crystal Structure Of Shikimate 5-Dehydrogenase (Aro		3e-31
1nvt_A	287	Crystal Structure Of Shikimate Dehydrogenase (Aroe		4e-31
3don_A	277	Crystal Structure Of Shikimate Dehydrogenase From S		1e-29
2hk7_A	269	Crystal Structure Of Shikimate Dehydrogenase From A		1e-23
2hk9_A	275	Crystal Structure Of Shikimate Dehydrogenase From A		1e-23
1wxd_A	263	Crystal Structure Of Shikimate 5-dehydrogenase (aro		3e-23
3js3_A	258	Crystal Structure Of Type I 3-Dehydroquinate Dehydr		8e-22
3toz_A	315	2.2 Angstrom Crystal Structure Of Shikimate 5-Dehyd		2e-20
3t4e_A	312	1.95 Angstrom Crystal Structure Of Shikimate 5-Dehy		1e-19
3fbt_A	282	Crystal Structure Of A Chorismate MutaseSHIKIMATE 5		7e-19
3l2i_A	276	1.85 Angstrom Crystal Structure Of The 3-Dehydroqui		9e-19
3m7w_A	255	Crystal Structure Of Type I 3-Dehydroquinate Dehydr		1e-18
4guf_A	276	1.5 Angstrom Crystal Structure Of The Salmonella En		5e-18
3nnt_A	276	Crystal Structure Of K170m Mutant Of Type I 3-Dehyd		5e-18
3o1n_A	276	1.03 Angstrom Crystal Structure Of Q236a Mutant Typ		6e-18
1qfe_A	252	The Structure Of Type I 3-Dehydroquinate Dehydratas		7e-18
3u62_A	253	Crystal Structure Of Shikimate Dehydrogenase From T		1e-17
1npd_A	288	X-Ray Structure Of Shikimate Dehydrogenase Complexe		1e-17
1vi2_A	300	Crystal Structure Of Shikimate-5-Dehydrogenase With		2e-17
1nyt_A	271	Shikimate Dehydrogenase Aroe Complexed With Nadp+ L		1e-15
2ox1_A	196	Archaeal Dehydroquinase Length = 196		2e-14
3pwz_A	272	Crystal Structure Of An Ael1 Enzyme From Pseudomona		4e-14
2yr1_A	257	Crystal Structure Of 3-Dehydroquinate Dehydratase F		6e-14
3phg_A	269	Crystal Structure Of The Shikimate 5-Dehydrogenase		1e-13
4fsh_A	271	Crystal Structure Of Shikimate Dehydrogenase (aroe)		2e-13
3tum_B	269	2.15 Angstrom Resolution Crystal Structure Of A Shi		3e-13
4foo_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		3e-13
4fr5_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		5e-13
4fpx_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		5e-13
4fos_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		7e-13
4fq8_A	271	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		8e-13
1npy_A	271	Structure Of Shikimate 5-Dehydrogenase-Like Protein		1e-12
1sfl_A	238	1.9a Crystal Structure Of Staphylococcus Aureus Typ		2e-12
1sfj_A	238	2.4a Crystal Structure Of Staphylococcus Aureus Typ		4e-12
3o8q_A	281	1.45 Angstrom Resolution Crystal Structure Of Shiki		2e-11
3pgj_A	302	2.49 Angstrom Resolution Crystal Structure Of Shiki		2e-11
2egz_A	219	Crystal Structure Of The 3-Dehydroquinate Dehydrata		3e-11
3o8q_B	275	1.45 Angstrom Resolution Crystal Structure Of Shiki		3e-11
2nlo_A	302	Crystal Structure Of The Quinate Dehydrogenase From		9e-10
3jyo_A	283	Quinate Dehydrogenase From Corynebacterium Glutamic		9e-10
3l9c_A	259	The Crystal Structure Of Smu.777 From Streptococcus		9e-10
1p74_A	272	Crystal Structure Of Shikimate Dehydrogenase (Aroe)		4e-08
2ocz_A	231	The Structure Of A Putative 3-dehydroquinate Dehydr		2e-06

>pdb|2GPT|A Chain A, Crystal Structure Of Arabidopsis Dehydroquinate Dehydratase- Shikimate Dehydrogenase In Complex With Tartrate And Shikimate Length = 523

Iteration: 1
 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/501 (72%), Positives = 418/501 (83%), Gaps = 2/501 (0%)
Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QVP IGLV
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
           MGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIG
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
           KPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEAA++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSA 378
           CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     SS 
Sbjct: 302 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 379 LAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLADLENFN 438
           LA K  VVI                  +VVIANRTY+RA ELAE +GG ALSL DL+N++
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
           PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA  VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
           G EMF+ QAYEQ+E FTGLP 
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPA 502

>pdb|2O7Q|A Chain A, Crystal Structure Of The A. Thaliana Dhq-Dehydroshikimate-Sdh- Shikimate-Nadp(H) Length = 523

Iteration: 1
 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/501 (72%), Positives = 417/501 (83%), Gaps = 2/501 (0%)
Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121
Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QVP IGLV
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
           MGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIG
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241
Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
           KPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEAA++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301
Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSA 378
            CDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     SS 
Sbjct: 302 XCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDXIGSISAIEDGLRSSGDPSSVPSSSSP 361
Query: 379 LAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALSLADLENFN 438
           LA K  VVI                  +VVIANRTY+RA ELAE +GG ALSL DL+N++
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421
Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
           PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA  VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481
Query: 499 GLEMFIGQAYEQYERFTGLPG 519
           G EMF+ QAYEQ+E FTGLP 
Sbjct: 482 GSEMFVRQAYEQFEIFTGLPA 502

>pdb|2EGG|A Chain A, Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From Geobacillus Kaustophilus Length = 297

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 144/279 (51%), Gaps = 21/279 (7%)
Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSS 302
           N    G   KV+G+IG PV HS SP+++N+AF  +G    +    V+   +        +
Sbjct: 15  NLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRA 74
Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
              AG + TIPHK A +   DEVD  A+ IGAVN II   +DG+L GYNTD +G + A+E
Sbjct: 75  LGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTII--NNDGRLVGYNTDGLGYVQALE 132
Query: 363 DGLRGRLNVSGGVSSALAGK-LFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRA---- 417
           +     +N++      L GK + V+                   R+ +ANRT ++A    
Sbjct: 133 E----EMNIT------LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182
Query: 418 RELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
           RE  E    +  SLA+ E    E  +I+ NTTS+GM P+V+  P+    L    +V D +
Sbjct: 183 REGDERRSAY-FSLAEAETRLAEYDIII-NTTSVGMHPRVEVQPLSLERLRPGVIVSDII 240
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           Y P  T+ L+EA+  GA + +G+ M + Q    +E++TG
Sbjct: 241 YNPLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTG 279

>pdb|1NVT|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe Or Mj1084) In Complex With Nadp+ Length = 287

Iteration: 1
 Score =  132 bits (333), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 140/276 (50%), Gaps = 27/276 (9%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFV--HLLVDDIAKFFQTYSSNDFAGFSC 310
           TKV G+IG PV HS SPI++N AFK  G N V+V   +L +++        +    GF+ 
Sbjct: 11  TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNV 70
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
           TIPHK   +K  DE+D  A+ IGAVN I  +  DGK  GYNTD +GA  A+E+ + GR+ 
Sbjct: 71  TIPHKIEIMKYLDEIDKDAQLIGAVNTI--KIEDGKAIGYNTDGIGARMALEEEI-GRVK 127
Query: 371 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVG----- 425
                         +VI                   ++IANRT ++A  LA+ +      
Sbjct: 128 DKN-----------IVIYGAGGAARAVAFELAKDNNIIIANRTVEKAEALAKEIAEKLNK 176
Query: 426 --GHALSLADLENFNPEDGM-ILANTTSIGMQPKVDETPIPK-HALGHYALVFDAVYTPK 481
             G  +  + L+     DG+ I+ N T IGM P +D  PI K   L    +V D +Y P 
Sbjct: 177 KFGEEVKFSGLD--VDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPL 234
Query: 482 ITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
            T LL+EA++  A  ++GL M I Q    ++ +TG+
Sbjct: 235 ETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGV 270

>pdb|3DON|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Staphylococcus Epidermidis Length = 277

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 138/278 (49%), Gaps = 34/278 (12%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF--VHLLVDDIAKFFQTYSSNDFAGFSCTIP 313
           F +IG P+ HS SP++++  F+S+     +  +++ V+      +  S     GF+ TIP
Sbjct: 3   FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTD---YVGAISAIEDGLRGRLN 370
           HKE  +   D+++  AKS+GAVN ++ +  DGK  GYNTD   YV  +  I +G+     
Sbjct: 63  HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEGIEDAYI 120
Query: 371 V---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           +   +GG S  +A +L+ ++                   + +ANRT  R    +  +   
Sbjct: 121 LILGAGGASKGIANELYKIVRPT----------------LTVANRTMSRFNNWSLNINKI 164
Query: 428 ALSLAD--LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
            LS A+  L+ F+     I+ NTT  GM    D   I  + L  + LV D VY P  T +
Sbjct: 165 NLSHAESHLDEFD-----IIINTTPAGMNGNTDSV-ISLNRLASHTLVSDIVYNPYKTPI 218
Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA 523
           L EAE+ G  I +GL+MF+ Q  E ++ +T L   + A
Sbjct: 219 LIEAEQRGNPIYNGLDMFVHQGAESFKIWTNLEPDIKA 256

>pdb|2HK7|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex Aeolicus In Complex With Mercury At 2.5 Angstrom Resolution Length = 269

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 41/280 (14%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ + +    
Sbjct: 2   INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 61
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           G + T+P KE  +   D V+  AK IGAVN +  +  +GK +GYNTD++G + +++    
Sbjct: 62  GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 115
Query: 367 GRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG 426
                   +   +  K  +V+                  +V + NRT ++A +LA+    
Sbjct: 116 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 168
Query: 427 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 476
             ++       +PE+ +    ++ NTTS+G++   DE P     + +Y L      V D 
Sbjct: 169 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 214
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           +Y  K T+LL++A+E GA ++ GL M + Q  E ++ + G
Sbjct: 215 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNG 252

>pdb|2HK9|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Aquifex Aeolicus In Complex With Shikimate And Nadp+ At 2.2 Angstrom Resolution Length = 275

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 41/280 (14%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ + +    
Sbjct: 8   INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVK 67
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           G + T+P KE  +   D V+  AK IGAVN +  +  +GK +GYNTD++G + +++    
Sbjct: 68  GINVTVPFKEEIIPLLDYVEDTAKEIGAVNTV--KFENGKAYGYNTDWIGFLKSLK---- 121
Query: 367 GRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGG 426
                   +   +  K  +V+                  +V + NRT ++A +LA+    
Sbjct: 122 -------SLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 174
Query: 427 HALSLADLENFNPEDGM----ILANTTSIGMQPKVDETPIPKHALGHYAL------VFDA 476
             ++       +PE+ +    ++ NTTS+G++   DE P     + +Y L      V D 
Sbjct: 175 EVVN-------SPEEVIDKVQVIVNTTSVGLK---DEDP----EIFNYDLIKKDHVVVDI 220
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           +Y  K T+LL++A+E GA ++ GL M + Q  E ++ + G
Sbjct: 221 IY--KETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNG 258

>pdb|1WXD|A Chain A, Crystal Structure Of Shikimate 5-dehydrogenase (aroe) From Thermus Thermophilus Hb8 Length = 263

Iteration: 1
 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 31/268 (11%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF------VHLLVDDIAKFFQTYSSNDFAGFS 309
           F ++G PV HS SP ++  A +S+G  G +      +  L   + +  +      F G +
Sbjct: 4   FAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-----FRGVN 58
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
            T+P KEAA+   D V   A+ IGAVN ++  Q +G+LFG+NTD  G + A++       
Sbjct: 59  LTLPLKEAALAHLDWVSPEAQRIGAVNTVL--QVEGRLFGFNTDAPGFLEALK------- 109
Query: 370 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHAL 429
             +GG+   L G   +V+                   V + NRT  RA  LAE  G  A+
Sbjct: 110 --AGGIP--LKGPA-LVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAV 164
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
            L         +  +L N T +G++     +P+P           D VY P  TR LREA
Sbjct: 165 PLE-----KAREARLLVNATRVGLE-DPSASPLPAELFPEEGAAVDLVYRPLWTRFLREA 218
Query: 490 EESGATIVSGLEMFIGQAYEQYERFTGL 517
           +  G  + +GL M   Q    +  +TGL
Sbjct: 219 KAKGLKVQTGLPMLAWQGALAFRLWTGL 246

>pdb|3JS3|A Chain A, Crystal Structure Of Type I 3-Dehydroquinate Dehydratase (Arod) From Clostridium Difficile With Covalent Reaction Intermediate Length = 258

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 14/233 (6%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPVPT 80
           ICVPI+G++   ++ +  +   +  D++E R+D  +N    + +K ++ E       +P 
Sbjct: 22  ICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPL 81
Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCK 138
           LFT+R + EGG+     +    + +     G  D IDVEL +  E  D +      ++ K
Sbjct: 82  LFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVK 141
Query: 139 VIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-----VHSQ 193
           VI+S+H++  TP  E++ + + R+Q  GAD+ K A    +  DV  + + T     +++ 
Sbjct: 142 VIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYAD 201
Query: 194 VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
            PII + M   G+ISR+    FG  LTFG  ++  VSAPGQ + K+L  + N 
Sbjct: 202 RPIITMSMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNL 252

>pdb|3TOZ|A Chain A, 2.2 Angstrom Crystal Structure Of Shikimate 5-Dehydrogenase From Listeria Monocytogenes In Complex With Nad. Length = 315

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 38/283 (13%)
Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSC 310
           T++ G+I  P+ HS SP ++NEAF  +G + V++   V D  +    Q + + +  G++ 
Sbjct: 37  TELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNV 96
Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED------G 364
           ++P+K    K  D++   A+ +GAVN ++    DG L G+ TD  G + A+++      G
Sbjct: 97  SMPNKTNIHKYLDKLSPAAELVGAVNTVV--NDDGVLTGHITDGTGYMRALKEAGHDIIG 154
Query: 365 LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELA 421
            +  +  +GG ++A+                           + I NR    Y  A +  
Sbjct: 155 KKMTICGAGGAATAIC----------------IQAALDGVKEISIFNRKDDFYANAEKTV 198
Query: 422 ETVG------GHALSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPK-HALGHYAL 472
           E +            + D E    E  + +I  N T +GM+P   ET +P    L    +
Sbjct: 199 EKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELI 258
Query: 473 VFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
           V D VY P  TRLL  AEE G   ++GL M + Q  + +E +T
Sbjct: 259 VSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWT 301

>pdb|3T4E|A Chain A, 1.95 Angstrom Crystal Structure Of Shikimate 5-Dehydrogenase (Aroe) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium In Complex With Nad Length = 312

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           ++ G++  P+ HS SP + N+A +  G    ++   VD+   A   +   +    G   +
Sbjct: 32  ELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVS 91
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI-EDGLRGRLN 370
           +P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI E G   R  
Sbjct: 92  MPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDMR-- 147
Query: 371 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXR-VVIANRT---YDRARELAETVGG 426
                     GK  V++                  + + + NR    +++A   A+ V  
Sbjct: 148 ----------GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE 197
Query: 427 HA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGH-YALVFDAV 477
           +         LAD   F        IL N T +GM+P  +E+ I   +L     LV + V
Sbjct: 198 NTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257
Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
           Y P +T+LL++A+++G   + G  M + Q  EQ+E +TG
Sbjct: 258 YNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTG 296

>pdb|3FBT|A Chain A, Crystal Structure Of A Chorismate MutaseSHIKIMATE 5- Dehydrogenase Fusion Protein From Clostridium Acetobutylicum Length = 282

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 31/267 (11%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           M  +T ++G+IG+ +GHS S  ++   F+ VG  G++    V  + + +   T+      
Sbjct: 1   MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCG 60
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG---AISAIED 363
           G + TIP+K   +K   E+   A+ IGAVN +  + S   + G+NTDY+G    +S    
Sbjct: 61  GLNVTIPYKVEVMKELYEISEKARKIGAVNTL--KFSREGISGFNTDYIGFGKMLSKFRV 118
Query: 364 GLRGRLNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRAREL 420
            ++  + V   SGG + A+   L                       + +  R  ++  E+
Sbjct: 119 EIKNNICVVLGSGGAARAVLQYL----------------KDNFAKDIYVVTRNPEKTSEI 162
Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
                   +S  +L N     G ++ N T  GM PK  E+P+ K  +  ++   D +Y P
Sbjct: 163 YGEF--KVISYDELSNLK---GDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNP 217
Query: 481 KITRLLREAEESGATIVSGLEMFIGQA 507
             T  L+ A ESG   V+GL M + QA
Sbjct: 218 VETLFLKYARESGVKAVNGLYMLVSQA 244

>pdb|3L2I|A Chain A, 1.85 Angstrom Crystal Structure Of The 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2. Length = 276

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q   
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|3M7W|A Chain A, Crystal Structure Of Type I 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2 In Covalent Complex With Dehydroquinate Length = 255

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 21  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 80
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 81  --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 138
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q   
Sbjct: 139 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 198
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 199 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 245

>pdb|4GUF|A Chain A, 1.5 Angstrom Crystal Structure Of The Salmonella Enterica 3- Dehydroquinate Dehydratase (arod) E86a Mutant Length = 276

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R    GG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKAGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q   
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|3NNT|A Chain A, Crystal Structure Of K170m Mutant Of Type I 3-Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Lt2 In Non-Covalent Complex With Dehydroquinate. Length = 276

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             VI+S+H++  TP+ E++   + ++Q  GADI   A       DV  +   TV  Q   
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPMIAVMPQTKADVLTLLTATVEMQERY 219
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
              PII + M + G+ISR+    FG   TFG ++    SAPGQ ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGQISVADL 266

>pdb|3O1N|A Chain A, 1.03 Angstrom Crystal Structure Of Q236a Mutant Type I Dehydroquinate Dehydratase (Arod) From Salmonella Typhimurium Length = 276

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN-------IKTLIKESPV 78
           I V +MG+++  +  +      +  D++E R+D   N    E+       I+ +I + P+
Sbjct: 42  IIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPL 101
Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAR-EFNDSIRGKKPEK 136
             LFT+R   EGG+      + +D+ R A++ G  D ID+EL     E   ++       
Sbjct: 102 --LFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN 159
Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV  Q   
Sbjct: 160 VAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219
Query: 194 --VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
              PII + M + G+ISR+    FG   TFG ++    SAPG  ++ DL
Sbjct: 220 ADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGAISVADL 266

>pdb|1QFE|A Chain A, The Structure Of Type I 3-Dehydroquinate Dehydratase From Salmonella Typhi Length = 252

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 18/239 (7%)
Query: 14  LVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKT-- 71
           ++  GM K    I V +MG  ++ +  +      +  D++E R+D   +    +++ T  
Sbjct: 10  IIGEGMPK----IIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAA 65
Query: 72  -LIKES--PVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVA-REFN 126
            +I+++   +P LFT+R   EGG+        + + R A++ G  D ID+EL     +  
Sbjct: 66  RVIRDAMPDIPLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVK 125
Query: 127 DSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVF 186
            ++         V++S+H++  TPS E++ + + ++QA GADI K A       DV  + 
Sbjct: 126 ATVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLL 185
Query: 187 QITVHSQV-----PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
             T+  Q      P+I + M + G+ISR+    FG   TFG ++    SAPGQ  + DL
Sbjct: 186 TATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQA--SAPGQIAVNDL 242

>pdb|3U62|A Chain A, Crystal Structure Of Shikimate Dehydrogenase From Thermotoga Maritima Length = 253

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVF------VHLLVDDIAKFFQTYSSNDFAGFS 309
           F IIG PV HS SP LYNE FK  G N  +            +I +  + Y      GF+
Sbjct: 3   FCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRILEEYD-----GFN 57
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRL 369
            TIPHKE  ++  +  +  A+ I AVNC+ R    GK  GYNTD+VG + ++E       
Sbjct: 58  ATIPHKERVMRYVEPSED-AQRIKAVNCVFR----GK--GYNTDWVGVVKSLEGVEVKEP 110
Query: 370 NVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHAL 429
            V  G   A    ++ ++                   + + NRT +RA+ L   V     
Sbjct: 111 VVVVGAGGAARAVIYALLQMGVKD-------------IWVVNRTIERAKALDFPV--KIF 155
Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
           SL  L+    +    L NTTS+GM  K +E P+   +L + +LV+D +Y    T L+ +A
Sbjct: 156 SLDQLDEV-VKKAKSLFNTTSVGM--KGEELPVSDDSLKNLSLVYDVIYFD--TPLVVKA 210
Query: 490 EESGAT-IVSGLEMFIGQAYEQ 510
            + G   I+ G  MF  QA E 
Sbjct: 211 RKLGVKHIIKGNLMFYYQAMEN 232

>pdb|1NPD|A Chain A, X-Ray Structure Of Shikimate Dehydrogenase Complexed With Nad+ From E.Coli (Ydib) Northeast Structural Genomics Research Consortium (Nesg) Target Er24 Length = 288

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           ++ G+   P+ HS SP   N+A +  G    +    VD+       +   +    G   +
Sbjct: 8   ELIGLXAYPIRHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIEGLKALKXRGTGVS 67
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGR 368
            P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++    ++G+
Sbjct: 68  XPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGK 125
Query: 369 LNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELAE 422
             V   +GG S+A+  +  +                     + + NR    +D+A   A+
Sbjct: 126 TXVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQ 169
Query: 423 TVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 473
            V  +         LAD + F        IL N T +G +P  +E+ +   +L H  L V
Sbjct: 170 RVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGXKPLENESLVNDISLLHPGLLV 229
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
            + VY P  T+LL++A+++G   + G    + Q  EQ+  +TG
Sbjct: 230 TECVYNPHXTKLLQQAQQAGCKTIDGYGXLLWQGAEQFTLWTG 272

>pdb|1VI2|A Chain A, Crystal Structure Of Shikimate-5-Dehydrogenase With Nad Length = 300

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 38/283 (13%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDD--IAKFFQTYSSNDFAGFSCT 311
           ++ G+   P+ HS SP   N+A +  G    +    VD+       +   +    G   +
Sbjct: 10  ELIGLXAYPIRHSLSPEXQNKALEKAGLPFTYXAFEVDNDSFPGAIEGLKALKXRGTGVS 69
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG---LRGR 368
            P+K+ A +  DE+   AK +GA+N I+    DG L GYNTD  G I AI++    ++G+
Sbjct: 70  XPNKQLACEYVDELTPAAKLVGAINTIVN--DDGYLRGYNTDGTGHIRAIKESGFDIKGK 127
Query: 369 LNV---SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRT---YDRARELAE 422
             V   +GG S+A+  +  +                     + + NR    +D+A   A+
Sbjct: 128 TXVLLGAGGASTAIGAQGAI----------------EGLKEIKLFNRRDEFFDKALAFAQ 171
Query: 423 TVGGHA------LSLADLENFNPE--DGMILANTTSIGMQPKVDETPIPKHALGHYAL-V 473
            V  +         LAD + F        IL N T +G +P  +E+ +   +L H  L V
Sbjct: 172 RVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGXKPLENESLVNDISLLHPGLLV 231
Query: 474 FDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
            + VY P  T+LL++A+++G   + G    + Q  EQ+  +TG
Sbjct: 232 TECVYNPHXTKLLQQAQQAGCKTIDGYGXLLWQGAEQFTLWTG 274

>pdb|1NYT|A Chain A, Shikimate Dehydrogenase Aroe Complexed With Nadp+ Length = 271

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCT 311
           + + + G P+ HSKSP ++ +  + +     +  +L  ++D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61
Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE------DGL 365
           +P KE A    DE+   A   GAVN ++R + DG+L G NTD VG +S +E       GL
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNTDGVGLLSDLERLSFIRPGL 120
Query: 366 RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE--- 422
           R  L  +GG S  +   L  +                    V I NRT  RA ELA+   
Sbjct: 121 RILLIGAGGASRGVLLPLLSL-----------------DCAVTITNRTVSRAEELAKLFA 163
Query: 423 -TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK 481
            T    ALS+ +LE    +   ++ N TS G+   +   P      G Y   +D  Y   
Sbjct: 164 HTGSIQALSMDELEGHEFD---LIINATSSGISGDIPAIPSSLIHPGIY--CYDMFYQKG 218
Query: 482 ITRLLREAEESGATI-VSGLEMFIGQAYEQYERFTGL 517
            T  L   E+ G+     GL M + QA   +  + G+
Sbjct: 219 KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGV 255

>pdb|2OX1|A Chain A, Archaeal Dehydroquinase Length = 196

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 29/197 (14%)
Query: 47  ASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRL 106
           A  AD+VE+R+D       R + + ++         T R + +GG+++GDE ER++ ++ 
Sbjct: 16  AEKADVVELRIDLFDFSGARVDKEKIL---------TCRRVSDGGKFEGDERERIEKMKR 66
Query: 107 AME-LGADYIDVELQV---AREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARI 162
           A + L  DY+D+E  +   A +FN          C++I S HN+  TP   D S L   +
Sbjct: 67  AFDSLNPDYVDLESDLPDSAFDFN----------CRIIESYHNFIRTP---DYSELKGIV 113
Query: 163 QASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFG 222
           +    D+VK AT      DV  + +I  +    ++  +MGER   +R+L A  G    + 
Sbjct: 114 EGRRGDLVKIATMGKSKRDVETIVRILTNYD-DVVAFLMGERFSFTRVLAAYLGSPFIYC 172
Query: 223 TLENGIVSAPGQPTIKD 239
            +  G   APGQ ++ D
Sbjct: 173 YV--GSPKAPGQISLDD 187

>pdb|3PWZ|A Chain A, Crystal Structure Of An Ael1 Enzyme From Pseudomonas Putida Length = 272

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 256 FGIIGKPVGHSKSPILY-------NEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGF 308
           + +IG+P+ H+KSP+++       N+  +     G      +DD       + S    G 
Sbjct: 5   YAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGS-----LDDFEAQVLQFRSEGGKGM 59
Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL--- 365
           + T P K  A +  D     A+   A N +  +  DG++   N D +G +  IE+ L   
Sbjct: 60  NITAPFKLRAFELADRRSERAQLARAANAL--KFEDGRIVAENFDGIGLLRDIEENLGEP 117
Query: 366 -RGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETV 424
            R R  +  G   A+ G L   +                   +VIANR   +A  L   +
Sbjct: 118 LRNRRVLLLGAGGAVRGALLPFLQAGPS-------------ELVIANRDMAKALALRNEL 164
Query: 425 GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR 484
               L ++  E    +   I+ N TS  +    D  P+P   LG  AL ++  Y   +T 
Sbjct: 165 DHSRLRISRYEALEGQSFDIVVNATSASL--TADLPPLPADVLGEAALAYELAYGKGLTP 222
Query: 485 LLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL 517
            LR A E G A +  G+ M + QA E +  + G+
Sbjct: 223 FLRLAREQGQARLADGVGMLVEQAAEAFAWWRGV 256

>pdb|2YR1|A Chain A, Crystal Structure Of 3-Dehydroquinate Dehydratase From Geobacillus Kaustophilus Hta426 Length = 257

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENI-------KTLIKESPV 78
           IC P++GE   K++ +  +      DL+E R D  +  + +E +       + +  E  +
Sbjct: 22  ICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGE--I 79
Query: 79  PTLFTYRPIWEGGQ-YDGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPEK 136
           P LFT R   EGGQ    +E E   ++      GA D +D EL       D  R    E+
Sbjct: 80  PILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGERIADVRR--MTEE 137
Query: 137 CKV--IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ- 193
           C V  +VS H +  TP  E L   + + +  GADI K A       DV  + Q T  ++ 
Sbjct: 138 CSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARR 197
Query: 194 ---VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ 248
              +P+I + MG  G I+R+    FG  +TF        SAPGQ  I D+  + +  Q
Sbjct: 198 ELAIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQS--SAPGQIPIDDVRTVLSILQ 253

>pdb|3PHG|A Chain A, Crystal Structure Of The Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori Length = 269

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I QA   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA 247

>pdb|4FSH|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (aroe) Clinical Variant V2356 From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDF---- 305
           K FG+ G P+ HSKSP+++N  F    K +GF G +  +L+       +++  N+F    
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKKLGFLGHYRPILLP-----LESHIKNEFLHLG 58
Query: 306 -AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIED 363
            +G + T+P KE A + CD++  +A    ++N ++    +  L GYNTD +G  +S    
Sbjct: 59  LSGANVTLPFKERAFQVCDKIKGIALECASINTLVLENDE--LVGYNTDALGFYLSLKHQ 116
Query: 364 GLRGRLNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE 422
             +  L + SGG + ALA  L                      +V + NR+  R  +  +
Sbjct: 117 NYQNALILGSGGSAKALACGL-----------------KKQGLKVSVLNRS-PRGLDFFQ 158
Query: 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVY 478
            +G           F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y
Sbjct: 159 RLGCDCFMEPPKSAFD-----LIINATSASLN---NELPLNKEVLKGYFKEAKLAYDLAY 210
Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
              +T  L  A+E       G +M I QA   +E+F+ 
Sbjct: 211 G-FLTPFLALAKELKIPFQDGKDMLIYQASLSFEKFSA 247

>pdb|4FOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237k Mutant From Helicobacter Pylori Length = 271

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I +A   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYKAALSFEKFSA 247

>pdb|4FR5|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210s Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D + +  +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYD-LASGFLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I QA   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA 247

>pdb|4FPX|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237n Mutant From Helicobacter Pylori Length = 271

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I  A   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYNAALSFEKFSA 247

>pdb|4FOS|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237a Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D  Y   +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYDLAYG-FLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I  A   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYAAALSFEKFSA 247

>pdb|4FQ8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210a Mutant From Helicobacter Pylori In Complex With Shikimate Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 254 KVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFS 309
           K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G +
Sbjct: 4   KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGAN 63
Query: 310 CTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVG-AISAIEDGLRGR 368
            T+P KE A + CD++  +A   GAVN ++    +  L GYNTD +G  +S  +   +  
Sbjct: 64  VTLPFKERAFQVCDKIKGIALECGAVNTLVLENDE--LVGYNTDALGFYLSLKQKNYQNA 121
Query: 369 LNV-SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGH 427
           L + +GG + ALA +L                      +V + NR+  R  +  + +G  
Sbjct: 122 LILGAGGSAKALACEL-----------------KKQGLQVSVLNRS-SRGLDFFQRLGCD 163
Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHY----ALVFDAVYTPKIT 483
                    F+     ++ N TS  +    +E P+ K  L  Y     L +D +    +T
Sbjct: 164 CFMEPPKSAFD-----LIINATSASLH---NELPLNKEVLKGYFKEGKLAYD-LAAGFLT 214
Query: 484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTG 516
             L  A+E       G +M I QA   +E+F+ 
Sbjct: 215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA 247

>pdb|1NPY|A Chain A, Structure Of Shikimate 5-Dehydrogenase-Like Protein Hi0607 Length = 271

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 249 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
           +  DT++   + G+P     +   +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRPSNFGTT--FHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59
Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNTDY+  +  IE     
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIV--NDNGFLRAYNTDYIAIVKLIEKYHLN 117
Query: 368 R-----LNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE 422
           +     ++ SGG++ A+                          ++ I  R     + LA 
Sbjct: 118 KNAKVIVHGSGGMAKAVVAAF----------------KNSGFEKLKIYARNVKTGQYLAA 161
Query: 423 TVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTP 480
             G   ++   LEN   +   IL N TSIGM+   +E  +  PK  + + ++ FD V  P
Sbjct: 162 LYGYAYIN--SLEN---QQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP 216
Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFT 515
             T  +R A+  G   +SG  + + QA EQ+E +T
Sbjct: 217 VETPFIRYAQARGKQTISGAAVIVLQAVEQFELYT 251

>pdb|1SFL|A Chain A, 1.9a Crystal Structure Of Staphylococcus Aureus Type I 3- Dehydroquinase, Apo Form Length = 238

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 16/220 (7%)
Query: 34  SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPTLFTYRPIWE 89
           S+++ ++          D++E+R+D  +N    +  + + K    +     L TYR   +
Sbjct: 15  SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQ 74
Query: 90  GG--QYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIR---GKKPEKCKVIVSSH 144
           GG  Q+  D    + +  LA   G D ID+E Q   +     R     +    +VI+S H
Sbjct: 75  GGYGQFTNDSYLNL-ISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHH 133
Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQ-ITVHSQV---PIIGLV 200
           N++ TP +++L  +  ++Q    + VK A    +  DV  + Q ++  S      ++G+ 
Sbjct: 134 NFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGIS 193
Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDL 240
           M + GLISR     FGG LT+G +  G   APGQ  + DL
Sbjct: 194 MSKLGLISRTAQGVFGGALTYGCI--GEPQAPGQIDVTDL 231

>pdb|1SFJ|A Chain A, 2.4a Crystal Structure Of Staphylococcus Aureus Type I 3- Dehydroquinase, With 3-Dehydroquinate Bound Length = 238

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 51  DLVEIRLDGLKNFNPRENIKTLIK----ESPVPTLFTYRPIWEGG--QYDGDENERVDVL 104
           D++E+R+D  +N    +  + + K    +     L TYR   +GG  Q+  D    + + 
Sbjct: 32  DVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNL-IS 90
Query: 105 RLAMELGADYIDVELQVAREFNDSIR---GKKPEKCKVIVSSHNYQYTPSVEDLSNLVAR 161
            LA   G D ID+E Q   +     R     +    +VI+S HN++ TP +++L  +  +
Sbjct: 91  DLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFK 150
Query: 162 IQASGADIVKFATTALDITDVARVFQ-ITVHSQV---PIIGLVMGERGLISRILCAKFGG 217
           +Q    + VK A    +  DV  + Q ++  S      ++G+ M + GLISR     FGG
Sbjct: 151 MQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGG 210
Query: 218 FLTFGTLENGIVSAPGQPTIKDL 240
            LT+G +  G   APGQ  + DL
Sbjct: 211 ALTYGCI--GEPQAPGQIDVTDL 231

>pdb|3O8Q|A Chain A, 1.45 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae Length = 281

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFA 306
           M      + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    
Sbjct: 4   MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR 63
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIED 363
           G + T+P KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A + 
Sbjct: 64  GCNVTVPFKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQV 122
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAET 423
            L+G   +  G   A  G L  ++                   + + NRT+ +A +LAE 
Sbjct: 123 LLKGATILLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAEL 169
Query: 424 VGGHALSLADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTP 480
           V  +    A       +   ++ N+TS    G  P +D  P+        ++ +D +Y  
Sbjct: 170 VAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGK 224
Query: 481 KITRLLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PG 519
             T   + A + G A  + GL M +GQA E +  + GL PG
Sbjct: 225 GYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPG 265

>pdb|3PGJ|A Chain A, 2.49 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Shikimate Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFA 306
           M      + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    
Sbjct: 25  MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGR 84
Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIED 363
           G + T+P KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A + 
Sbjct: 85  GCNVTVPFKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQV 143
Query: 364 GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAET 423
            L+G   +  G   A  G L  ++                   + + NRT+ +A +LAE 
Sbjct: 144 LLKGATILLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAEL 190
Query: 424 VGGHALSLADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTP 480
           V  +    A       +   ++ N+TS    G  P +D  P+        ++ +D +Y  
Sbjct: 191 VAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGK 245
Query: 481 KITRLLREAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PG 519
             T   + A + G A  + GL M +GQA E +  + GL PG
Sbjct: 246 GYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPG 286

>pdb|2EGZ|A Chain A, Crystal Structure Of The 3-Dehydroquinate Dehydratase From Aquifex Aeolicus Vf5 Length = 219

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFN---PRENIKTLIKESPVPTL 81
           LI VP+   +  +   ++ KA   GAD+VE+R+D   + +    +E ++  +    + T+
Sbjct: 2   LIAVPLDDTNFSE---NLKKAKEKGADIVELRVDQFSDTSLNYVKEKLEE-VHSQGLKTI 57
Query: 82  FTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQ----VAREFNDSIRGKKPEKC 137
            T R   EGG+   +  E  + L       +DY D+EL     + + +N +    K    
Sbjct: 58  LTIRSPEEGGREVKNREELFEELSPL----SDYTDIELSSRGLLVKLYNITKEAGK---- 109
Query: 138 KVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPII 197
           K+I+S HN++ TP    +  ++      G  I K A  A    DVAR+  I+   +   I
Sbjct: 110 KLIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSYEDVARLLCISRQVEGEKI 168
Query: 198 GLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDL 243
            + MG+ G ISR+    FG  +T+ +LE     APGQ  ++++++L
Sbjct: 169 LISMGDYGKISRLAGYVFGSVITYCSLEKAF--APGQIPLEEMVEL 212

>pdb|3O8Q|B Chain B, 1.45 Angstrom Resolution Crystal Structure Of Shikimate 5- Dehydrogenase (Aroe) From Vibrio Cholerae Length = 275

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 29/274 (10%)
Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVH--LLVDDIAKFFQTYSSNDFAGFSCTIP 313
           + + G P+ HSKSP ++    +    + ++    + VD   +  + + +    G + T+P
Sbjct: 5   YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 64
Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAIS---AIEDGLRGRLN 370
            KE A +  D +   A+  GAVN  +++  DG++ G NTD  G +    A +  L+G   
Sbjct: 65  FKEEAYRFADRLTERARLAGAVN-TLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATI 123
Query: 371 VSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAETVGGHALS 430
           +  G   A  G L  ++                   + + NRT+ +A +LAE V  +   
Sbjct: 124 LLIGAGGAARGVLKPLLDQQPAS-------------ITVTNRTFAKAEQLAELVAAYGEV 170
Query: 431 LADLENFNPEDGMILANTTSI---GMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
            A       +   ++ N+TS    G  P +D  P+        ++ +D +Y    T   +
Sbjct: 171 KAQAFEQLKQSYDVIINSTSASLDGELPAID--PV---IFSSRSVCYDMMYGKGYTVFNQ 225
Query: 488 EAEESG-ATIVSGLEMFIGQAYEQYERFTGL-PG 519
            A + G A  + GL M +GQA E +  + GL PG
Sbjct: 226 WARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPG 259

>pdb|2NLO|A Chain A, Crystal Structure Of The Quinate Dehydrogenase From Corynebacterium Glutamicum Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 111/281 (39%), Gaps = 29/281 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSND 304
           D+ + G+IG+ +  S++P ++     + G   V+  +          D+           
Sbjct: 22  DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 81
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
           F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G    +E+G
Sbjct: 82  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFGRGMEEG 140
Query: 365 LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE-- 422
           L           +A    +  V                   ++ +A+    RA+ LA+  
Sbjct: 141 L----------PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 190
Query: 423 --TVGGHALSLADLENFN----PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA 476
              VG  A+   D           DG++  N T +GM P    T      L     V D 
Sbjct: 191 NNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKDHWVGDV 247
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
           VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 248 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 288

>pdb|3JYO|A Chain A, Quinate Dehydrogenase From Corynebacterium Glutamicum In Complex With Nad Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 111/281 (39%), Gaps = 29/281 (10%)
Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSND 304
           D+ + G+IG+ +  S++P ++     + G   V+  +          D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62
Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
           F G + T P+K+A +   DEV   A  +GAVN ++   + G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVI-DATGHTTGHNTDVSGFGRGMEEG 121
Query: 365 LRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE-- 422
           L           +A    +  V                   ++ +A+    RA+ LA+  
Sbjct: 122 L----------PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171
Query: 423 --TVGGHALSLADLENFN----PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA 476
              VG  A+   D           DG++  N T +GM P    T      L     V D 
Sbjct: 172 NNAVGREAVVGVDARGIEDVIAAADGVV--NATPMGM-PAHPGTAFDVSCLTKDHWVGDV 228
Query: 477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGL 517
           VY P  T LL+ A   G   + G  M I QA + +  FTGL
Sbjct: 229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGL 269

>pdb|3L9C|A Chain A, The Crystal Structure Of Smu.777 From Streptococcus Mutans Ua159 Length = 259

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%), Gaps = 32/251 (12%)
Query: 7   LVASGSKLVS--GG--MRKNPTLICVPIMGESVDKM-VVDMGKANASGADLVEIRLDGLK 61
           LV  GS + S  GG  M +    I VP+M +++++   +D+ + +++  D++E R D L 
Sbjct: 14  LVPRGSHMASMTGGQQMGRGSMKIVVPVMPQNIEEANQLDLTRIDST--DIIEWRADYLV 71
Query: 62  NFNPRENIKTLI-----KESPVPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYI 115
               +++I T+      K S    +FT R   EGG       + + ++R +A     DYI
Sbjct: 72  ----KDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYI 127
Query: 116 DVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT 175
           D E    R+  + +     +   +I+S HN++ TP  E+L  + + + A    +VK A  
Sbjct: 128 DFEYFSYRDVLEEMY----DFSNLILSYHNFEETP--ENLMEVFSELTALAPRVVKIAVM 181
Query: 176 ------ALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIV 229
                  LD+ +  R F+ T++     + + M + G ISR+     G   TF +LE    
Sbjct: 182 PKNEQDVLDLMNYTRGFK-TLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQE-- 238
Query: 230 SAPGQPTIKDL 240
           SAPGQ ++ D+
Sbjct: 239 SAPGQISLADM 249

>pdb|1P74|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) From Haemophilus Influenzae Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL--VDDIAKFFQTYSSNDFAGFSCTI 312
           ++ + G P+  SKSP++ N+          ++  L  +D   +    +      G + T 
Sbjct: 3   LYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITS 62
Query: 313 PHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE--DGLRGRLN 370
           P KE A +  DE    AK   A N + ++  DGKL+  NTD +G ++ ++  + LR   +
Sbjct: 63  PFKERAYQLADEYSQRAKLAEACNTL-KKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQH 121
Query: 371 VS-GGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYDRARELAE 422
           V   G   A  G L  ++                   +V+ANRT+ + +ELAE
Sbjct: 122 VLILGAGGATKGVLLPLLQAQQ--------------NIVLANRTFSKTKELAE 160

>pdb|2OCZ|A Chain A, The Structure Of A Putative 3-dehydroquinate Dehydratase From Streptococcus Pyogenes Length = 231

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 28/231 (12%)
Query: 22  NPTLICVPIMGESVDK-MVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLI-----KE 75
           N   I  P+     D+   +D+ K      +L+E R D    F P++ I  +      K 
Sbjct: 2   NAXRIVAPVXPRHFDEAQAIDISKY--EDVNLIEWRAD----FLPKDEIVAVAPAIFEKF 55
Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKP 134
           +    +FT R + EGG       E VD+++ +      DYID E    +    S+  +  
Sbjct: 56  AGKEIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHK----SVFQEXL 111
Query: 135 EKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT------ALDITDVARVFQI 188
           +   +I+S HN++ TP  E+L    +        +VK A         LD+ +  R F+ 
Sbjct: 112 DFPNLILSYHNFEETP--ENLXEAFSEXTKLAPRVVKIAVXPQSEQDVLDLXNYTRGFK- 168
Query: 189 TVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD 239
           T++ +     +  G+ G +SR      G   T+ +L++  VS PGQ T+ D
Sbjct: 169 TLNPEQEFATISXGKLGRLSRFAGDVIGSSWTYVSLDH--VSGPGQVTLND 217

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	616
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	0.0
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	1e-112
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	1e-106
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	1e-105
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	1e-105
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	1e-102
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	1e-100
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	5e-99
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	1e-98
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	2e-97
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	5e-93
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	1e-90
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	1e-85
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	1e-75
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	4e-75
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	6e-75
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	3e-72
2egz_A	219	3-dehydroquinate dehydratase; aquifex aeolicus VF5	6e-70
2yr1_A	257	3-dehydroquinate dehydratase; amino acid biosynthe	1e-69
1sfl_A	238	3-dehydroquinate dehydratase; 3-dehydroquinase, en	3e-69
3js3_A	258	3-dehydroquinate dehydratase; AROD, covalent react	6e-66
2ocz_A	231	3-dehydroquinate dehydratase; structural genomics,	7e-66
3o1n_A	276	3-dehydroquinate dehydratase; structural genomics,	1e-64
3l9c_A	259	3-dehydroquinate dehydratase; AROD, amino-acid bio	3e-64
2ox1_A	196	3-dehydroquinate dehydratase; (beta-alpha)8 barrel	5e-60
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	9e-13
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	5e-10
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-07
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	2e-06
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-06
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	5e-06
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-05
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	2e-05
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	3e-05
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	3e-05
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	4e-05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	4e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	4e-05
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-05
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-05
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	8e-05
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	8e-05
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	1e-04
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	1e-04
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	1e-04
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-04
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-04
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-04
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-04
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-04
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-04
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-04
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-04
3atr_A	453	Conserved archaeal protein; saturating double bond	2e-04
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-04
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-04
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-04
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-04
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-04
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-04
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-04
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-04
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-04
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-04
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-04
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	5e-04
3cgv_A	397	Geranylgeranyl reductase related protein; NP_39399	5e-04
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-04
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	5e-04
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-04
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	6e-04
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	7e-04
3e1t_A	512	Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro	7e-04
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	8e-04
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	8e-04
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-04
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-04

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* Length = 523

 Score =  689 bits (1781), Expect = 0.0
 Identities = 382/500 (76%), Positives = 435/500 (87%), Gaps = 2/500 (0%)

Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPT 80
           KNP+LIC P+M +S+DKMV++  KA+  GADLVEIRLD LK+FNP E++KT+IK+SP+PT
Sbjct: 2   KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPT 61

Query: 81  LFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVI 140
           LFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF  SI GKKP K KVI
Sbjct: 62  LFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVI 121

Query: 141 VSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLV 200
           VSSHNYQ TPSVEDL  LVARIQ +GADIVK ATTA+DI DVAR+F IT  +QVP IGLV
Sbjct: 122 VSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLV 181

Query: 201 MGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG 260
           MGERGL+SRILC+KFGG+LTFGTL++  VSAPGQPTIKDLLDLYNFR++GPDTKV+GIIG
Sbjct: 182 MGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG 241

Query: 261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVK 320
           KPV HSKSPI++N+AFKSV FNGV+VHLLVD++  F Q YSS+DFAGFSCTIPHKEAA++
Sbjct: 242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQ 301

Query: 321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSA 378
           CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR  G  +     SS 
Sbjct: 302 CCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSP 361

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFN 438
           LA K  VVIGAGGAGKALAYGAK KGA+VVIANRTY+RA ELAE +GG ALSL DL+N++
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYH 421

Query: 439 PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
           PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA  VS
Sbjct: 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS 481

Query: 499 GLEMFIGQAYEQYERFTGLP 518
           G EMF+ QAYEQ+E FTGLP
Sbjct: 482 GSEMFVRQAYEQFEIFTGLP 501

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Length = 312

 Score =  338 bits (869), Expect = e-112
 Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 28/304 (9%)

Query: 230 SAPGQPTIKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL 289
           S+      ++L    N   +    ++ G++  P+ HS SP + N+A +  G    ++   
Sbjct: 8   SSGVDLGTENLYFQSNAMDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFE 67

Query: 290 V--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKL 347
           V     A   +   +    G   ++P+K+ A +  DE+   AK +GA+N I+    DG L
Sbjct: 68  VDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYL 125

Query: 348 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R 406
            GYNTD  G I AI++               + GK  V++GAGGA  A+   A  +G   
Sbjct: 126 RGYNTDGTGHIRAIKESGFD-----------MRGKTMVLLGAGGAATAIGAQAAIEGIKE 174

Query: 407 VVIANRT---YDRARELAETVGGHA------LSLADLENFNP--EDGMILANTTSIGMQP 455
           + + NR    +++A   A+ V  +         LAD   F        IL N T +GM+P
Sbjct: 175 IKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKP 234

Query: 456 KVDETPI-PKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERF 514
             +E+ I     L    LV + VY P +T+LL++A+++G   + G  M + Q  EQ+E +
Sbjct: 235 LENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELW 294

Query: 515 TGLP 518
           TG  
Sbjct: 295 TGKA 298

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Length = 287

 Score =  321 bits (826), Expect = e-106
 Identities = 101/280 (36%), Positives = 147/280 (52%), Gaps = 25/280 (8%)

Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           +   TKV G+IG PV HS SPI++N AFK  G N V+V   V  +++        +    
Sbjct: 7   INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66

Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           GF+ TIPHK   +K  DE+D  A+ IGAVN I     DGK  GYNTD +GA  A+E+ + 
Sbjct: 67  GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEEI- 123

Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG- 425
                       +  K  V+ GAGGA +A+A+   AK   ++IANRT ++A  LA+ +  
Sbjct: 124 ----------GRVKDKNIVIYGAGGAARAVAFEL-AKDNNIIIANRTVEKAEALAKEIAE 172

Query: 426 ------GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVY 478
                 G  +  + L+  + +   I+ N T IGM P +D  PI     L    +V D +Y
Sbjct: 173 KLNKKFGEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231

Query: 479 TPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
            P  T LL+EA++  A  ++GL M I Q    ++ +TG+ 
Sbjct: 232 NPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVE 271

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Length = 315

 Score =  319 bits (820), Expect = e-105
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 227 GIVSAPGQPTIKDLLDLYNFRQM-GPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVF 285
           G+         +         +     T++ G+I  P+ HS SP ++NEAF  +G + V+
Sbjct: 10  GVDLGTENLYFQSNAMTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVY 69

Query: 286 VHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQS 343
           +   V   ++    Q + + +  G++ ++P+K    K  D++   A+ +GAVN ++    
Sbjct: 70  LAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVND-- 127

Query: 344 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAK 403
           DG L G+ TD  G + A+++               + GK   + GAGGA  A+   A   
Sbjct: 128 DGVLTGHITDGTGYMRALKEAGHD-----------IIGKKMTICGAGGAATAICIQAALD 176

Query: 404 GA-RVVIANRT---YDRARELAETVGGH------ALSLADLENFNPE--DGMILANTTSI 451
           G   + I NR    Y  A +  E +            + D E    E  + +I  N T +
Sbjct: 177 GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGV 236

Query: 452 GMQPKVDETPIP-KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQ 510
           GM+P   ET +P    L    +V D VY P  TRLL  AEE G   ++GL M + Q  + 
Sbjct: 237 GMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKA 296

Query: 511 YERFTGLP 518
           +E +T   
Sbjct: 297 FEIWTHKE 304

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Length = 297

 Score =  318 bits (818), Expect = e-105
 Identities = 94/279 (33%), Positives = 141/279 (50%), Gaps = 17/279 (6%)

Query: 245 NFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSS 302
           N    G   KV+G+IG PV HS SP+++N+AF  +G    +    V    +        +
Sbjct: 15  NLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRA 74

Query: 303 NDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIE 362
              AG + TIPHK A +   DEVD  A+ IGAVN II    DG+L GYNTD +G + A+E
Sbjct: 75  LGIAGVNVTIPHKLAVIPFLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALE 132

Query: 363 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELA 421
           + +             L GK  +VIGAGG  + + +   +  A R+ +ANRT ++A  L 
Sbjct: 133 EEMNI----------TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182

Query: 422 ETVGGHALSLADLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT 479
                   +   L        +  I+ NTTS+GM P+V+  P+    L    +V D +Y 
Sbjct: 183 REGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN 242

Query: 480 PKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
           P  T+ L+EA+  GA + +G+ M + Q    +E++TG  
Sbjct: 243 PLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQW 281

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Length = 271

 Score =  311 bits (799), Expect = e-102
 Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 25/274 (9%)

Query: 249 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
           +  DT++   + G+P   +     +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59

Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRG 367
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNTDY+  +  IE     
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKYHLN 117

Query: 368 RLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGG 426
           +                +V G+GG  KA+      +   ++ I  R     + LA   G 
Sbjct: 118 K------------NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG- 164

Query: 427 HALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGHYALVFDAVYTPKITR 484
                A + +   +   IL N TSIGM+   +E  +  PK  + + ++ FD V  P  T 
Sbjct: 165 ----YAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETP 220

Query: 485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
            +R A+  G   +SG  + + QA EQ+E +T   
Sbjct: 221 FIRYAQARGKQTISGAAVIVLQAVEQFELYTHQR 254

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Length = 275

 Score =  306 bits (787), Expect = e-100
 Identities = 78/278 (28%), Positives = 145/278 (52%), Gaps = 21/278 (7%)

Query: 243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTY 300
            ++   +   T+++G+IG PV HS SP+  N   +  G N V++   +  +++ K F+ +
Sbjct: 2   HHHHHMINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGF 61

Query: 301 SSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISA 360
            +    G + T+P KE  +   D V+  AK IGAVN +     +GK +GYNTD++G + +
Sbjct: 62  KALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKS 119

Query: 361 IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
           ++  +             +  K  +V+GAGGA +A+ Y    +GA+V + NRT ++A +L
Sbjct: 120 LKSLIPE-----------VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKL 168

Query: 421 AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP 480
           A+      ++  +      +   ++ NTTS+G++ + D        +    +V D +Y  
Sbjct: 169 AQKFPLEVVNSPEEV---IDKVQVIVNTTSVGLKDE-DPEIFNYDLIKKDHVVVDIIYKE 224

Query: 481 KITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
             T+LL++A+E GA ++ GL M + Q  E ++ + G  
Sbjct: 225 --TKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCE 260

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Length = 263

 Score =  301 bits (774), Expect = 5e-99
 Identities = 86/267 (32%), Positives = 128/267 (47%), Gaps = 23/267 (8%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
             F ++G PV HS SP ++  A +S+G  G +       + +    +      F G + T
Sbjct: 2   LRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLT 60

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
           +P KEAA+   D V   A+ IGAVN +++   +G+LFG+NTD  G + A++ G       
Sbjct: 61  LPLKEAALAHLDWVSPEAQRIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAGG------ 112

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
                  L G   +V+GAGGAG+A+A+  +  G  V + NRT  RA  LAE  G  A+ L
Sbjct: 113 -----IPLKGPA-LVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPL 166

Query: 432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE 491
                       +L N T +G++     +P+P           D VY P  TR LREA+ 
Sbjct: 167 EKAREAR-----LLVNATRVGLEDP-SASPLPAELFPEEGAAVDLVYRPLWTRFLREAKA 220

Query: 492 SGATIVSGLEMFIGQAYEQYERFTGLP 518
            G  + +GL M   Q    +  +TGL 
Sbjct: 221 KGLKVQTGLPMLAWQGALAFRLWTGLL 247

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Length = 282

 Score =  301 bits (773), Expect = 1e-98
 Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 21/273 (7%)

Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           M  +T ++G+IG+ +GHS S  ++   F+ VG  G++    V  + + +   T+      
Sbjct: 1   MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCG 60

Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLR 366
           G + TIP+K   +K   E+   A+ IGAVN +        + G+NTDY+G    +     
Sbjct: 61  GLNVTIPYKVEVMKELYEISEKARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSK--- 115

Query: 367 GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVG 425
               V       +   + VV+G+GGA +A+    K   A+ + +  R  ++  E+     
Sbjct: 116 --FRVE------IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF- 166

Query: 426 GHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL 485
              +S  +L N     G ++ N T  GM PK  E+P+ K  +  ++   D +Y P  T  
Sbjct: 167 -KVISYDELSNL---KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLF 222

Query: 486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
           L+ A ESG   V+GL M + QA    E +  + 
Sbjct: 223 LKYARESGVKAVNGLYMLVSQAAASEEIWNDIS 255

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Length = 283

 Score =  298 bits (766), Expect = 2e-97
 Identities = 74/281 (26%), Positives = 113/281 (40%), Gaps = 27/281 (9%)

Query: 252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV-------DDIAKFFQTYSSND 304
           D+ + G+IG+ +  S++P ++     + G   V+  +          D+           
Sbjct: 3   DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLG 62

Query: 305 FAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDG 364
           F G + T P+K+A +   DEV   A  +GAVN ++     G   G+NTD  G    +E+G
Sbjct: 63  FNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEG 121

Query: 365 LRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAET 423
           L                   V +GAGG G A+AY     G  ++ +A+    RA+ LA+ 
Sbjct: 122 LPN-----------AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV 170

Query: 424 VGGH----ALSLADLENFN--PEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV 477
           +       A+   D             + N T +GM      T      L     V D V
Sbjct: 171 INNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDVV 229

Query: 478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
           Y P  T LL+ A   G   + G  M I QA + +  FTGL 
Sbjct: 230 YMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLE 270

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* Length = 269

 Score =  286 bits (735), Expect = 5e-93
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 29/271 (10%)

Query: 253 TKVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGF 308
            K FG+ G P+ HSKSP+++N  F    K + F G +  +L+   +     +     +G 
Sbjct: 3   LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGA 62

Query: 309 SCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGR 368
           + T+P KE A + CD++  +A   GAVN ++    + +L GYNTD +G   +++      
Sbjct: 63  NVTLPFKERAFQVCDKIKGIALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQ----- 115

Query: 369 LNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
                        +  +++GAGG+ KALA   K +G +V + NR+     +  + +G   
Sbjct: 116 ----------KNYQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGL-DFFQRLGCDC 164

Query: 429 LSLADLENFNPEDGMILANTTSIGMQPKVD-ETPIPKHALGHYALVFDAVYTPKITRLLR 487
                   F+     ++ N TS  +  ++     + K       L +D  Y    T  L 
Sbjct: 165 FMEPPKSAFD-----LIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGFL-TPFLS 218

Query: 488 EAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
            A+E       G +M I QA   +E+F+   
Sbjct: 219 LAKELKTPFQDGKDMLIYQAALSFEKFSASQ 249

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Length = 277

 Score =  280 bits (719), Expect = 1e-90
 Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 20/265 (7%)

Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 313
           F +IG P+ HS SP++++  F+S+     +  + V  +      +  S     GF+ TIP
Sbjct: 3   FAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIP 62

Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
           HKE  +   D+++  AKS+GAVN ++ +  DGK  GYNTD +G ++ ++    G      
Sbjct: 63  HKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEG------ 114

Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
                +     +++GAGGA K +A    K     + +ANRT  R    +  +    ++L+
Sbjct: 115 -----IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNIN--KINLS 167

Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
             E+    +  I+ NTT  GM     ++ I  + L  + LV D VY P  T +L EAE+ 
Sbjct: 168 HAESHLD-EFDIIINTTPAGMNGN-TDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQR 225

Query: 493 GATIVSGLEMFIGQAYEQYERFTGL 517
           G  I +GL+MF+ Q  E ++ +T L
Sbjct: 226 GNPIYNGLDMFVHQGAESFKIWTNL 250

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Length = 253

 Score =  266 bits (683), Expect = 1e-85
 Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 33/267 (12%)

Query: 256 FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIP 313
           F IIG PV HS SP LYNE FK  G N  +    +  +      +     ++ GF+ TIP
Sbjct: 3   FCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRI-LEEYDGFNATIP 61

Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG 373
           HKE  ++  +  +  A+ I AVNC+ R +      GYNTD+VG + ++E           
Sbjct: 62  HKERVMRYVEPSED-AQRIKAVNCVFRGK------GYNTDWVGVVKSLEG---------- 104

Query: 374 GVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHALSLA 432
                   +  VV+GAGGA +A+ Y   +     + + NRT +RA+ L   V     SL 
Sbjct: 105 ----VEVKEPVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK--IFSLD 158

Query: 433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES 492
            L+         L NTTS+GM+   +E P+   +L + +LV+D +Y    T L+ +A + 
Sbjct: 159 QLDEVVK-KAKSLFNTTSVGMKG--EELPVSDDSLKNLSLVYDVIYFD--TPLVVKARKL 213

Query: 493 GAT-IVSGLEMFIGQAYEQYERFTGLP 518
           G   I+ G  MF  QA E  + +    
Sbjct: 214 GVKHIIKGNLMFYYQAMENLKIWGIYD 240

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Length = 271

 Score =  241 bits (618), Expect = 1e-75
 Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 24/270 (8%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
           + + + G P+ HSKSP ++ +  + +     +  +L   +D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
           +P KE A    DE+   A   GAVN ++R + DG+L G NTD VG +S +E     RL+ 
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNTDGVGLLSDLE-----RLSF 115

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H 427
                    G   ++IGAGGA + +     +    V I NRT  RA ELA+         
Sbjct: 116 I------RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQ 169

Query: 428 ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR 487
           ALS+ +LE     +  ++ N TS G+    D   IP   +      +D  Y    T  L 
Sbjct: 170 ALSMDELEG---HEFDLIINATSSGISG--DIPAIPSSLIHPGIYCYDMFYQKGKTPFLA 224

Query: 488 EAEESGATIVS-GLEMFIGQAYEQYERFTG 516
             E+ G+   + GL M + QA   +  + G
Sbjct: 225 WCEQRGSKRNADGLGMLVAQAAHAFLLWHG 254

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Length = 281

 Score =  240 bits (615), Expect = 4e-75
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 20/274 (7%)

Query: 248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDF 305
            M      + + G P+ HSKSP ++    +    + ++    V  D   +  + + +   
Sbjct: 3   AMASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGG 62

Query: 306 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGL 365
            G + T+P KE A +  D +   A+  GAVN + +   DG++ G NTD  G +  +    
Sbjct: 63  RGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLL--- 118

Query: 366 RGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETV 424
                V       L G   ++IGAGGA + +       + A + + NRT+ +A +LAE V
Sbjct: 119 --AQQVL------LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELV 170

Query: 425 GGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT 483
             +  +     E       +I+ N+TS  +    +   I        ++ +D +Y    T
Sbjct: 171 AAYGEVKAQAFEQLKQSYDVII-NSTSASLDG--ELPAIDPVIFSSRSVCYDMMYGKGYT 227

Query: 484 RLLREAEESGAT-IVSGLEMFIGQAYEQYERFTG 516
              + A + G    + GL M +GQA E +  + G
Sbjct: 228 VFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRG 261

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Length = 272

 Score =  239 bits (613), Expect = 6e-75
 Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 18/269 (6%)

Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSC 310
           +  + +IG+P+ H+KSP+++    ++      +  +    DD       + S    G + 
Sbjct: 2   SDRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNI 61

Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLN 370
           T P K  A +  D     A+   A N +     DG++   N D +G +  IE+     L 
Sbjct: 62  TAPFKLRAFELADRRSERAQLARAANALKFE--DGRIVAENFDGIGLLRDIEE----NLG 115

Query: 371 VSGGVSSALAGKLFVVIGAGGAGKALAYG-AKAKGARVVIANRTYDRARELAETVGGHAL 429
                   L  +  +++GAGGA +       +A  + +VIANR   +A  L   +    L
Sbjct: 116 EP------LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRL 169

Query: 430 SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
            ++  E    +   I+ N TS  +    D  P+P   LG  AL ++  Y   +T  LR A
Sbjct: 170 RISRYEALEGQSFDIVVNATSASLTA--DLPPLPADVLGEAALAYELAYGKGLTPFLRLA 227

Query: 490 EESGA-TIVSGLEMFIGQAYEQYERFTGL 517
            E G   +  G+ M + QA E +  + G+
Sbjct: 228 REQGQARLADGVGMLVEQAAEAFAWWRGV 256

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Length = 272

 Score =  232 bits (595), Expect = 3e-72
 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 19/269 (7%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCT 311
            ++ + G P+  SKSP++ N+          ++  L   D   +    +      G + T
Sbjct: 2   DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNIT 61

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNV 371
            P KE A +  DE    AK   A N + +   DGKL+  NTD +G ++ ++     RLN 
Sbjct: 62  SPFKERAYQLADEYSQRAKLAEACNTLKKLD-DGKLYADNTDGIGLVTDLQ-----RLNW 115

Query: 372 SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LS 430
                     +  +++GAGGA K +          +V+ANRT+ + +ELAE    +  + 
Sbjct: 116 L------RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ 169

Query: 431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT-PKITRLLREA 489
              +++   +   ++ N TS G+        +    L   +  +D  Y     T  +   
Sbjct: 170 AVSMDSIPLQTYDLVINATSAGLSG--GTASVDAEILKLGSAFYDMQYAKGTDTPFIALC 227

Query: 490 EESGATIVS-GLEMFIGQAYEQYERFTGL 517
           +  G T VS G  M + QA   +  + G+
Sbjct: 228 KSLGLTNVSDGFGMLVAQAAHSFHLWRGV 256

>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A Length = 219

 Score =  224 bits (573), Expect = 6e-70
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 12/223 (5%)

Query: 25  LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTL--IKESPVPTLF 82
           LI VP+   +  + +    KA   GAD+VE+R+D   + +     + L  +    + T+ 
Sbjct: 2   LIAVPLDDTNFSENLK---KAKEKGADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTIL 58

Query: 83  TYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVS 142
           T R   EGG+   +  E  +     +   +DY D+EL             K    K+I+S
Sbjct: 59  TIRSPEEGGREVKNREELFE----ELSPLSDYTDIELSSRGLLVKLYNITKEAGKKLIIS 114

Query: 143 SHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG 202
            HN++ TP    +  ++      G  I K A  A    DVAR+  I+   +   I + MG
Sbjct: 115 YHNFELTPPNWIIREVLREGYRYG-GIPKIAVKANSYEDVARLLCISRQVEGEKILISMG 173

Query: 203 ERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
           + G ISR+    FG  +T+ +LE     APGQ  ++++++L  
Sbjct: 174 DYGKISRLAGYVFGSVITYCSLEKA--FAPGQIPLEEMVELRK 214

>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  225 bits (574), Expect = 1e-69
 Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             IC P++GE   K++ +  +      DL+E R D  +  + +E +             +
Sbjct: 20  PCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEI 79

Query: 79  PTLFTYRPIWEGGQY-DGDENERVDVLRLAMELGA-DYIDVELQVAREFNDSIRGKKPEK 136
           P LFT R   EGGQ    +E E   ++      GA D +D EL       D  R  +   
Sbjct: 80  PILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGERIADVRRMTEECS 139

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQ--- 193
             ++VS H +  TP  E L   + + +  GADI K A       DV  + Q T  ++   
Sbjct: 140 VWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARREL 199

Query: 194 -VPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP 251
            +P+I + MG  G I+R+    FG  +TF        SAPGQ  I D+  + +  Q   
Sbjct: 200 AIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQ--SSAPGQIPIDDVRTVLSILQTYS 256

>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A* Length = 238

 Score =  223 bits (569), Expect = 3e-69
 Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 17/240 (7%)

Query: 19  MRKNPTLICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK--- 74
           M      +   I  + S+++ ++          D++E+R+D  +N    +  + + K   
Sbjct: 1   MTH--VEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKV 58

Query: 75  -ESPVPTLFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDS---I 129
            +     L TYR   +GG      +  ++++  LA   G D ID+E Q   +       I
Sbjct: 59  MQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRII 118

Query: 130 RGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT 189
              +    +VI+S HN++ TP +++L  +  ++Q    + VK A    +  DV  + Q  
Sbjct: 119 THLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAM 178

Query: 190 V----HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
                     ++G+ M + GLISR     FGG LT+G +      APGQ  + DL     
Sbjct: 179 STFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGE--PQAPGQIDVTDLKAQVT 236

>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile} Length = 258

 Score =  215 bits (549), Expect = 6e-66
 Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 14/235 (5%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             ICVPI+G++   ++ +  +   +  D++E R+D  +N    + +K ++ E       +
Sbjct: 20  PKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDI 79

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRGK-KPEK 136
           P LFT+R + EGG+     +    + +     G  D IDVEL +  E  D +      ++
Sbjct: 80  PLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE 139

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-----VH 191
            KVI+S+H++  TP  E++ + + R+Q  GAD+ K A    +  DV  + + T     ++
Sbjct: 140 VKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIY 199

Query: 192 SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
           +  PII + M   G+ISR+    FG  LTFG  ++  VSAPGQ + K+L  + N 
Sbjct: 200 ADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNL 252

>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1} Length = 231

 Score =  214 bits (546), Expect = 7e-66
 Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 16/237 (6%)

Query: 22  NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPT 80
           N   I  P+M    D+    +  +     +L+E R D L           + ++ +    
Sbjct: 2   NAMRIVAPVMPRHFDEAQ-AIDISKYEDVNLIEWRADFLPKDEIVAVAPAIFEKFAGKEI 60

Query: 81  LFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDSIRGKKPEKCKV 139
           +FT R + EGG       E VD++  +      DYID E    +     +     +   +
Sbjct: 61  IFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHKSVFQEML----DFPNL 116

Query: 140 IVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-----VHSQV 194
           I+S HN++ TP  E+L    + +      +VK A       DV  +   T     ++ + 
Sbjct: 117 ILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQ 174

Query: 195 PIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGP 251
               + MG+ G +SR      G   T+ +L++  VS PGQ T+ D+  +    +M  
Sbjct: 175 EFATISMGKLGRLSRFAGDVIGSSWTYVSLDH--VSGPGQVTLNDMKRIIEVLEMDI 229

>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 3nnt_A* 3oex_A 3m7w_A 1gqn_A 1l9w_A* 1qfe_A* Length = 276

 Score =  212 bits (541), Expect = 1e-64
 Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 14/237 (5%)

Query: 21  KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE----- 75
           +    I V +MG+++  +  +      +  D++E R+D   N    E++           
Sbjct: 37  EGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREII 96

Query: 76  SPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDS-IRGKK 133
           +  P LFT+R   EGG+      + +D+ R A++ G  D ID+EL    +   + +    
Sbjct: 97  TDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAH 156

Query: 134 PEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITV--- 190
                VI+S+H++  TP+ E++   + ++Q  GADI K A       DV  +   TV   
Sbjct: 157 QHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQ 216

Query: 191 --HSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
             ++  PII + M + G+ISR+    FG   TFG ++    SAPG  ++ DL  +  
Sbjct: 217 ERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKA--SAPGAISVADLRTVLT 271

>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans} Length = 259

 Score =  211 bits (537), Expect = 3e-64
 Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 16/234 (6%)

Query: 19  MRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SP 77
           M +    I VP+M +++++    +        D++E R D L   +       + ++ S 
Sbjct: 30  MGRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSG 88

Query: 78  VPTLFTYRPIWEGGQYDGDENERVDVLR-LAMELGADYIDVELQVAREFNDSIRGKKPEK 136
              +FT R   EGG       + + ++R +A     DYID E    R+  + +     + 
Sbjct: 89  HEVIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DF 144

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQIT-----VH 191
             +I+S HN++ TP  E+L  + + + A    +VK A    +  DV  +   T     ++
Sbjct: 145 SNLILSYHNFEETP--ENLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLN 202

Query: 192 SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
                + + M + G ISR+     G   TF +LE    SAPGQ ++ D+  +  
Sbjct: 203 PNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQE--SAPGQISLADMRKIKE 254

>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus} Length = 196

 Score =  197 bits (503), Expect = 5e-60
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 31/221 (14%)

Query: 26  ICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR 85
           +   +      ++        A  AD+VE+R+D       R +            + T R
Sbjct: 3   LVATLSSPEELEL--------AEKADVVELRIDLFDFSGARVDK---------EKILTCR 45

Query: 86  PIWEGGQYDGDENERVDVLRLAME-LGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSH 144
            + +GG+++GDE ER++ ++ A + L  DY+D+E  +     D         C++I S H
Sbjct: 46  RVSDGGKFEGDERERIEKMKRAFDSLNPDYVDLESDLPDSAFDF-------NCRIIESYH 98

Query: 145 NYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMGER 204
           N+  TP   +L      ++    D+VK AT      DV  + +I  +    ++  +MGER
Sbjct: 99  NFIRTPDYSEL---KGIVEGRRGDLVKIATMGKSKRDVETIVRILTNYD-DVVAFLMGER 154

Query: 205 GLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
              +R+L A  G    +  + +    APGQ ++ D  ++ +
Sbjct: 155 FSFTRVLAAYLGSPFIYCYVGS--PKAPGQISLDDAREIIS 193

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Length = 144

 Score = 64.8 bits (159), Expect = 9e-13
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 371 VSGGVSSA---LAGKLF----VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET 423
           VS  + S    +  K      +++G G     +A        +V +A R  D  R  AE 
Sbjct: 6   VS--IPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK 63

Query: 424 VGGHALSLADLEN 436
                + + D+++
Sbjct: 64  YEYEYVLINDIDS 76

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 Length = 404

 Score = 60.7 bits (148), Expect = 5e-10
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 14/78 (17%)

Query: 371 VSGGVSSA---LAGKLF--------VVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRAR 418
           VS  + SA   LA +          +V+GAG  GK +A     +G   V++ANRTY+RA 
Sbjct: 148 VS--IGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAV 205

Query: 419 ELAETVGGHALSLADLEN 436
           ELA  +GG A+   +L +
Sbjct: 206 ELARDLGGEAVRFDELVD 223

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           ++    +V GAG G G+AL  G   +G +V +  R Y R ++    +G   + + 
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIV 55

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
           + G    V+G G  G ++A    A GA+V +  R           +G     ++    
Sbjct: 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES-DLLARIAEMGMEPFHISKAAQ 209

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 5/62 (8%)

Query: 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----ALSLAD 433
            A +  V+ GA  G G   A     +GA V++A R   +    A T+ G      L L D
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD 73

Query: 434 LE 435
           L 
Sbjct: 74  LS 75

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           S    K+ +V GAG G G+A+A      G  V +A R  D  +E A  +G  AL + 
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVP 80

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 45.5 bits (109), Expect = 2e-05
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
           LAG+  +V GAG G G+       A GARVV  +RT      L     G      DL
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL 61

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
           + G    V+G G  G  +A    A GA V +  R+      + E +G       +L+ 
Sbjct: 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFHTDELKE 211

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 386 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD 433
           ++G+G   ++LA      G +VV+ +R   R   L  +         +
Sbjct: 33  ILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVTFQEE 79

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 Length = 276

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
             +G G   +      K +     I +R+ DRAR LAE  GG A +L           + 
Sbjct: 6   NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKH--PELNGVVF 63

Query: 445 LA 446
           + 
Sbjct: 64  VI 65

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 44.8 bits (107), Expect = 4e-05
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
            +G   +V GAG G G+       A GA+VV   RT      LA+   G      DL
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL 61

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 385 VVIGAGGAGKALA-YGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGM 443
           +++G+G   + +    A      V +A RT   A+ LA+  G  A+SL D+ + +  D +
Sbjct: 27  LLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISL-DVTDDSALDKV 85

Query: 444 ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE-AEESGATIVSGLEM 502
           +  N   I + P      + K A+     V  + Y     R L     ++G T+++ + +
Sbjct: 86  LADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGL 145

Query: 503 FIG 505
             G
Sbjct: 146 DPG 148

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 45.3 bits (106), Expect = 4e-05
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 1/122 (0%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
           +++G+G   +         G +V +A RT + A++L+  V        D+ +    D  +
Sbjct: 7   LMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV 66

Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLRE-AEESGATIVSGLEMF 503
             +   I + P      + K A+     V    Y       L + A+++G T+++ + + 
Sbjct: 67  AKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLD 126

Query: 504 IG 505
            G
Sbjct: 127 PG 128

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
           + G++ VV GA  G G+ +A      GA V I  R  D  R +A+     GG  + + 
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
           G  S +L GK+ ++ GAG G G+ +A      GA+VVI +R    A  +A  +G  AL++
Sbjct: 1   GPGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV 60

Query: 432 A 432
           A
Sbjct: 61  A 61

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 6e-05
 Identities = 77/524 (14%), Positives = 150/524 (28%), Gaps = 162/524 (30%)

Query: 3   SPNLLV----ASG-SKLVSGGMRKNPTLICVPIMGESVDKMV-VDMGKANASGADLVEI- 55
           + N+L+     SG + +             +        K+  +++   N S   ++E+ 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD------FKIFWLNLKNCN-SPETVLEML 202

Query: 56  -----RLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMEL 110
                ++D   N+  R +  + IK          R + +   Y       + VL      
Sbjct: 203 QKLLYQID--PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCLLVLL----- 251

Query: 111 GADYIDV-ELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADI 169
                +V   +    FN          CK+++++   Q T                    
Sbjct: 252 -----NVQNAKAWNAFN--------LSCKILLTTRFKQVT-------------------- 278

Query: 170 VKFATTALDITDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIV 229
                   D    A    I++        L   E     + L  K+        L+    
Sbjct: 279 --------DFLSAATTTHISLDHHSM--TLTPDE----VKSLLLKY--------LDCRPQ 316

Query: 230 SAPGQ-----P--------TIKDLLDLY-NFRQMGPDTKVFGIIGKPVGHSKSPILYNEA 275
             P +     P        +I+D L  + N++ +  D K+  II   +   + P  Y + 
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTTIIESSLNVLE-PAEYRKM 374

Query: 276 FKSVGFNGVF---VH----LL-----------VDDIAKFFQTYS--SNDFAGFSCTIP-- 313
           F  +    VF    H    LL           V  +      YS         + +IP  
Sbjct: 375 FDRL---SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 314 HKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDG----KLFGYNTDYVGA-ISAIEDGLRGR 368
           + E  VK  +E       +   N      SD      L  Y   ++G  +  IE   R  
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER-- 489

Query: 369 LNVSGGVSSALAGKLFV--------VIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL 420
                     L   +F+        +          A+ A       +   + Y     +
Sbjct: 490 --------MTLFRMVFLDFRFLEQKIRHDS-----TAWNASGSILNTLQQLKFYK--PYI 534

Query: 421 AETVGGHALSLADLENF--NPEDGMILANTTSI---GMQPKVDE 459
            +    +   +  + +F    E+ +I +  T +    +  + + 
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEA 578

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 8e-05
 Identities = 39/268 (14%), Positives = 75/268 (27%), Gaps = 66/268 (24%)

Query: 237 IKDLLDLYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKF 296
            KD+ D+   + +    ++  II      S +  L+     S     V          KF
Sbjct: 35  CKDVQDM--PKSILSKEEIDHIIMSKDAVSGTLRLF-WTLLSKQEEMV---------QKF 82

Query: 297 FQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFG-YNTDYV 355
            +     ++  F  +    E              +   +    R  +D ++F  YN   +
Sbjct: 83  VEEVLRINY-KFLMSPIKTEQ-------RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134

Query: 356 GAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTY 414
                +   L   L  +  V         ++ G  G+GK  +A         V     +Y
Sbjct: 135 QPYLKLRQALL-ELRPAKNV---------LIDGVLGSGKTWVA-------LDVC---LSY 174

Query: 415 DRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE-------TPIPKHAL 467
               ++   +    L+L      +PE  + +       + P             +  H++
Sbjct: 175 KVQCKMDFKI--FWLNLK--NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 468 GH----------YA---LVFDAVYTPKI 482
                       Y    LV   V   K 
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKA 258

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 44.0 bits (105), Expect = 6e-05
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L GK  ++ G+  G G+A A     +GA V IA+   +RAR+ A  +G  A ++ 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQ 60

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 44.1 bits (105), Expect = 7e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           LAGK+ +V GAG G G A+A     +G  V+ A+   D A   A  +G  A +  
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR 81

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 43.7 bits (104), Expect = 8e-05
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 372 SGGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGH 427
            G +   L  K+ V+ G G   G  LA     +GA +V+A RT +R  ++A+ V   G  
Sbjct: 2   PGSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR 61

Query: 428 ALSLA 432
           ALS+ 
Sbjct: 62  ALSVG 66

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL 431
           S         VIGAG   G  +A    A+G  V    R  ++   L   +   GG  ++ 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61

Query: 432 A 432
           +
Sbjct: 62  S 62

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 16/47 (34%)

Query: 386 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           + G G  GK+L       G  VV  +R    +  L         S A
Sbjct: 24  IFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEA 70

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 12/49 (24%), Positives = 16/49 (32%)

Query: 386 VIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADL 434
           V+G G  G+ +A      G  V I  R        AE     A   +  
Sbjct: 24  VLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQW 72

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Length = 266

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVV-IANRTYDRARELAETVGG-HALSLADL 434
           V+IGAG     LA     KG R+V + +RT + ARELA+ V   +   LA++
Sbjct: 14  VLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEV 65

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---------- 424
           +  LAG    + GA  G GKA+A  A   GA +VIA +T     +L  T+          
Sbjct: 40  TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99

Query: 425 GGHALSL-ADLENFNPEDGMI 444
           GG AL    D+ +       +
Sbjct: 100 GGKALPCIVDVRDEQQISAAV 120

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 432
           L GK  ++ GA  G G  +A    A GAR+V++ R         R L E  G    ++A
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 432
             GK+  + G G G GK +     + GA+ VIA+R  D     A +++   G    ++ 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
           G +++ L  K+ ++ GA  G G   +      GARVV+A+         A +VG  A+  
Sbjct: 3   GSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHH 62

Query: 432 A 432
            
Sbjct: 63  V 63

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 348 FGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGAR 406
            G NT     ++ +                ++ GK  VV+   G  G   A     +GA 
Sbjct: 96  NGSNTTAAAGVALVVKAA----------GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAE 145

Query: 407 VVIANRTYDRARELAETV---GGHALSLADL 434
           VV+  R  D+A+  A++V       ++ A+ 
Sbjct: 146 VVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA 428
            G  S   G+  VV G   G G A A     +GAR+V+++       +    +   G  A
Sbjct: 23  DGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA 82

Query: 429 LSLA 432
             + 
Sbjct: 83  HGVV 86

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
           L G    V GAG G G  +     A GAR+++ +R        A+ +G 
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA 57

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L G++ ++ G   G G+AL     A+GARV + +++ +R REL    GG+A+ + 
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVV 57

>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGHALSLADLENFNPED 441
           ++IG G AG + AY    +G ++++     D     R   +  G  A+S A  +      
Sbjct: 10  LIIGGGFAGSSAAYQLSRRGLKILLV----DSKPWNRIGDKPCGD-AVSKAHFDKLGMPY 64

Query: 442 GM---ILANTTSIGMQPKVDETPIPKHALGHYAL---VFDAVYTPKITRLLREAEESGAT 495
                +      I +     +T    +  G + L   +++        R+L+EA++ G  
Sbjct: 65  PKGEELENKINGIKLYSPDMQTVWTVNGEG-FELNAPLYNQ-------RVLKEAQDRGVE 116

Query: 496 IVSG 499
           I   
Sbjct: 117 IWDL 120

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L  ++ +V G G G G+A A      GA VV+A+   D A  +A  +G  A  + 
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVR 79

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL 431
           S+A+  K+ ++ G   G GK +A     +GARVVI  RT ++  E    +    G  L++
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 432 A 432
            
Sbjct: 61  Q 61

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 379 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
             G   +V G AGG G+A      A G  VVIA+   ++ + LA+ +G  A 
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE 79

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)

Query: 379 LAGKLFVVIGAG-GAGKALAYG-AKAKGARVVIANRTYDR----ARELAETVGGHALSL- 431
           L G++ +V G   G G  +A G A+A G  VV+A+R  +     A++L E  G   ++  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 432 ADLENFNPEDGMI 444
            D+ N+     ++
Sbjct: 78  CDVSNYEEVKKLL 90

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
           L  K+ VV GA GG G  +     ++   V    R  +    LAE  G   +  
Sbjct: 3   LKKKIAVVTGATGGMGIEIVK-DLSRDHIVYALGRNPEHLAALAEIEGVEPIES 55

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L+G+  +V G   G G A+A      GA V IA+     A+ +   +     ++ 
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVE 64

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
            AG+   V G   G G  L      +G +V IA+   D   +   T+
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
           G +  +   + ++V G G G GK +A G  A GA V+I  R  D+     + +
Sbjct: 3   GSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL 55

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 7/72 (9%)

Query: 379 LAGKLFVVIGAG-GAGKALAYG-AKAKGARVVIANRTYDRARELAETV---GGHALSL-A 432
           L+GK  ++ GA  G GK +A   A+A GA+V +A R  D  + +A+ +   GG AL +  
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 433 DLENFNPEDGMI 444
           D+   +   GM+
Sbjct: 89  DVTQPDQVRGML 100

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 41.7 bits (99), Expect = 4e-04
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 6/77 (7%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL--A 432
           L  ++ +V GA  G G+  A      GA V++  R  ++ R++A  +    G        
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 433 DLENFNPEDGMILANTT 449
           DL     E+   LA   
Sbjct: 70  DLLTCTSENCQQLAQRI 86

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
           L+GK  ++ G   G G   A  A A GARVV+A+   +     A  +G  A 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAAR 54

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 377 SALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
           S+L+G++ VV GA  G G A+A    + GARVV+  R  ++ R +   +   GG A S A
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE--------TVGGHAL 429
           L G++ +V G   G GKA+       G+ VVIA+R  +R +  A+        T     +
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 430 SLA 432
            + 
Sbjct: 76  PIQ 78

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 379 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
           + G + V+ G A G G A A     +GA  V+ +         A+ +G + +
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV 61

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
           L GK+ +V GA  G G+A A     +GA+VV+  R  +   EL + +   GG A +LA
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA 432
           L  K+  + G G G G  +A      G   VIA+R+  R    AR+LA   G   L L+
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS 83

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L  K+ V+ GA  G G A A    A+GARV I  R  D        +GG A+ + 
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQ 81

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 40.9 bits (97), Expect = 6e-04
 Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-ADLEN 436
           L GK+ +V GA  G GKA+A     +GA+V+    +   A+ +++ +G +   +  ++ N
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 437 FNPEDGMI 444
               + ++
Sbjct: 67  PESIEAVL 74

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 379 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
           L  ++F+V G + G G A+      +GA V+  +       E A  +G    
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVR 56

>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Length = 512

 Score = 41.5 bits (97), Expect = 7e-04
 Identities = 28/133 (21%), Positives = 38/133 (28%), Gaps = 30/133 (22%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS------LADL---- 434
           +VIG G  G  LA     +G RV++     +R       +G   L        A L    
Sbjct: 11  IVIGGGPGGSTLASFVAMRGHRVLLL----EREAFPRHQIGESLLPATVHGICAMLGLTD 66

Query: 435 ----ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGH-YAL---VFDAVYTPKITRLL 486
                 F  + G                 T  P    G  Y +    FD         LL
Sbjct: 67  EMKRAGFPIKRGGTFRWGKEPEPWT-FGFTRHPDDPYGFAYQVERARFDD-------MLL 118

Query: 487 REAEESGATIVSG 499
           R +E  G  +   
Sbjct: 119 RNSERKGVDVRER 131

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-AD 433
           +  LAGK  +V GA  G GKA+A    A GA V++++   + A+  A ++G  A ++ AD
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAAD 60

Query: 434 LENFNPEDGMI 444
           + +      + 
Sbjct: 61  ISDPGSVKALF 71

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 40.6 bits (96), Expect = 8e-04
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV--GGHALSL-ADL 434
           LAG++ +V G   G G+ +A G    GARV I  R  +   + A  +   G   ++ ADL
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSLA- 432
           L GK  +V GA  G G+ +AY     GA VV+  R+ +          E     A  +A 
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85

Query: 433 DLEN 436
            +E+
Sbjct: 86  TMED 89

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 40.5 bits (96), Expect = 9e-04
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 379 LAGKLFVVIGAG-GAGKALAYG-AKAKGARVVIANRTYDRARELAETV---GGHALSL-A 432
           L GK  +V G+  G G A A G A A GARV++ +       E  +T+   G  A  +  
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 433 DL 434
           D+
Sbjct: 66  DV 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	616
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	100.0
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	100.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	100.0
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	100.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	100.0
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	100.0
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	100.0
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	100.0
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	100.0
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	100.0
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	100.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	100.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	100.0
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	100.0
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	100.0
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	100.0
4h3d_A	258	3-dehydroquinate dehydratase; structural genomics,	100.0
2yr1_A	257	3-dehydroquinate dehydratase; amino acid biosynthe	100.0
3o1n_A	276	3-dehydroquinate dehydratase; structural genomics,	100.0
1sfl_A	238	3-dehydroquinate dehydratase; 3-dehydroquinase, en	100.0
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	100.0
3l9c_A	259	3-dehydroquinate dehydratase; AROD, amino-acid bio	100.0
2ocz_A	231	3-dehydroquinate dehydratase; structural genomics,	100.0
2egz_A	219	3-dehydroquinate dehydratase; aquifex aeolicus VF5	100.0
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	100.0
2ox1_A	196	3-dehydroquinate dehydratase; (beta-alpha)8 barrel	100.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	100.0
2dvm_A	439	Malic enzyme, 439AA long hypothetical malate oxido	99.98
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.7
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.39
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	99.39
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	99.34
3l07_A	285	Bifunctional protein fold; structural genomics, ID	99.33
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	99.29
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	99.27
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	99.16
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	99.13
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.99
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.98
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	98.97
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	98.93
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	98.75
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.75
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	98.42
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.38
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.34
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	98.31
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	98.3
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.27
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	98.27
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.26
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.24
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.08
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.06
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	98.04
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.03
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.03
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.02
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.02
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.01
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.01
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	98.01
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.99
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.98
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.97
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	97.97
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.95
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.95
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.93
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.92
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.9
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.89
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.89
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.88
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.87
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.86
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.86
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.86
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.86
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.86
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.86
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.86
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.86
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.85
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.85
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.85
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.85
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.84
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.83
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.82
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.82
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.82
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.82
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.81
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.81
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.8
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.8
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.8
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.8
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.79
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.79
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.79
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.79
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.79
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.79
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.78
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.78
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.78
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.77
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.77
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.77
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	97.76
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.76
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.76
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.75
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.74
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.74
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.74
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.74
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.74
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.73
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.73
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.73
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.73
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.73
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.73
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.72
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.72
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.72
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.72
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.72
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.72
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.71
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.71
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.71
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.71
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	97.7
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.7
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.7
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.7
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.69
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.69
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.69
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.69
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.68
1spx_A	278	Short-chain reductase family member (5L265); paral	97.68
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.68
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.67
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.67
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.67
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.67
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.66
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.65
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.65
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.65
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.65
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.65
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.63
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.63
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.62
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.61
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.61
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.6
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.6
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.6
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.59
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.59
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.58
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.58
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.57
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	97.57
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.57
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.56
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.56
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	97.56
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.55
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.54
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.54
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.53
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.53
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.52
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.52
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.52
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.51
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.51
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.5
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.5
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.49
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.48
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.48
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.46
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.46
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.46
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.45
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.45
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.45
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.44
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.44
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.44
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.44
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.43
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.42
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.42
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.42
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.42
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.42
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.41
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.41
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.41
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.41
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.41
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.4
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.4
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.39
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.39
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.39
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.39
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.38
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.38
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.38
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.38
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.38
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.37
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.37
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.36
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.35
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.35
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.35
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.34
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.34
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.33
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.33
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.33
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.32
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.31
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.3
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.3
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.3
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.29
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	97.29
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.28
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.28
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.28
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	97.27
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.27
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.26
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	97.26
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.25
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.25
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.25
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	97.24
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.23
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.22
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.22
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.22
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.22
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.2
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	97.2
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.2
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.19
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.19
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.18
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.18
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.17
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.17
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	97.16
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	97.16
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	97.15
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.15
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.15
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.14
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	97.14
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	97.14
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.14
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.12
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	97.12
3aog_A	440	Glutamate dehydrogenase; NAD(H), oxidoreducta; HET	97.12
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.11
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.11
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.1
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.09
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.09
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.09
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.07
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	97.07
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.07
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.06
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.06
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.06
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.06
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.05
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.05
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.05
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.03
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	97.03
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.02
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	97.02
2v82_A	212	2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l	97.02
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.01
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.01
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	97.01
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.0
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	97.0
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.99
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.97
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.97
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.97
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.96
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	96.95
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.95
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.94
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.94
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.89
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.89
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.88
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.88
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.87
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.87
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	96.86
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.86
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.86
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.83
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.83
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.83
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.82
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.82
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.82
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.81
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	96.8
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.8
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.79
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.79
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	96.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.78
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.78
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.77
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	96.75
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	96.75
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.74
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.73
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	96.73
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.72
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.72
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.71
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.71
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.7
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	96.7
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.69
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.69
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.68
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	96.68
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.67
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	96.67
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	96.66
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.65
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.64
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.64
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.63
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.63
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.63
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	96.63
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	96.62
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.62
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.61
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.61
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.6
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	96.58
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.58
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.57
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.55
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.54
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.54
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.52
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.51
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.51
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.51
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.5
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.48
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.47
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.45
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.43
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.42
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	96.37
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.37
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.36
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.36
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.35
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.35
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	96.34
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.34
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	96.33
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.33
2yfq_A	421	Padgh, NAD-GDH, NAD-specific glutamate dehydrogena	96.32
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	96.31
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.31
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.28
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.27
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.27
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.26
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.25
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.24
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.24
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.23
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	96.23
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	96.22
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	96.22
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.21
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.21
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.21
3k92_A	424	NAD-GDH, NAD-specific glutamate dehydrogenase; ROC	96.2
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	96.19
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.18
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.17
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	96.17
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.16
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.15
2tmg_A	415	Protein (glutamate dehydrogenase); metabolic role,	96.14
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.13
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.13
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.12
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.1
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.1
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.1
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.08
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.06
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.02
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.02
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.01
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.0
1v9l_A	421	Glutamate dehydrogenase; protein-NAD complex, oxid	95.99
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.99
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	95.99
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.99
4had_A	350	Probable oxidoreductase protein; structural genomi	95.99
1gtm_A	419	Glutamate dehydrogenase; oxidoreductase, NAD, NADP	95.98
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.97
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.97
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	95.96
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.95
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.94
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	95.93
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	95.92
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.9
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.89
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.88
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.88
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.88
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.87
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.83
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.82
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.82
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.81
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.81
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	95.81
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	95.8
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.8
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.8
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.79
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.78
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.78
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.77
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.76
1wa3_A	205	2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG,	95.75
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.75
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.74
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.73
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.72
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.72
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	95.72
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	95.72
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	95.71
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.7
4eye_A	342	Probable oxidoreductase; structural genomics, niai	95.69
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	95.69
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.69
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.69
3q58_A	229	N-acetylmannosamine-6-phosphate 2-epimerase; TIM b	95.68
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	95.68
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	95.67
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.66

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=100.00  E-value=2.6e-110  Score=935.20  Aligned_cols=518  Identities=74%  Similarity=1.147  Sum_probs=455.9

Q ss_pred             CCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHH
Q 007151           21 KNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENER  100 (616)
Q Consensus        21 ~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~  100 (616)
                      +++|+|||||+++|.++++.+++++.+.|+|+||||+|+|.+.++.++++.+++..++|+|||+|+++|||.|++++++|
T Consensus         2 ~~~~~icv~l~~~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~   81 (523)
T 2o7s_A            2 KNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENER   81 (523)
T ss_dssp             CSCCEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHH
T ss_pred             CCCCEEEEEecCCCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHH
Confidence            57899999999999999999999888899999999999999877667899988888999999999999999999999999


Q ss_pred             HHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 007151          101 VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (616)
Q Consensus       101 ~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~  180 (616)
                      +++|+.++++|+||||||++.+++.++.+...++.++|+|+|||||++||+++++.++|++|.++||||+|+|+||++.+
T Consensus        82 ~~ll~~~~~~~~~yiDvEl~~~~~~~~~~~~~~~~~~kiI~S~H~f~~tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~  161 (523)
T 2o7s_A           82 RDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIA  161 (523)
T ss_dssp             HHHHHHHHHHTCSEEEEEHHHHHHHHHHTTTCCCTTCEEEEEEECSSCCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGG
T ss_pred             HHHHHHHHHhCCCEEEEECCCchHHHHHHHHhccCCCEEEEEcccCCCCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHH
Confidence            99999999999999999999998888887765556899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcccCCCCceEEEEec
Q 007151          181 DVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQMGPDTKVFGIIG  260 (616)
Q Consensus       181 D~~~ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr~~~~~t~~~~liG  260 (616)
                      |+++|++++.+.+.|+|+|+||+.|++||+++++|||++||+++++..++||||+++++++++|++.+++++|++|||||
T Consensus       162 D~~~l~~~~~~~~~p~i~~~MG~~G~~SRil~~~~gs~lt~~~l~~~~~sApGQ~~~~~l~~~~~~~~~~~~~~~~~viG  241 (523)
T 2o7s_A          162 DVARMFHITSKAQVPTIGLVMGERGLMSRILCSKFGGYLTFGTLDSSKVSAPGQPTIKDLLDLYNFRRIGPDTKVYGIIG  241 (523)
T ss_dssp             GHHHHHHHHHHCSSCEEEEEESGGGTHHHHCTTTTTCSEEECBSSTTCCSSTTCCBHHHHHHTSCGGGCCTTCEEEEEEE
T ss_pred             HHHHHHHHHhhcCCCEEEEEcCCCCchhhhhhhhcCCceeecCCCccccCCCCCCcHHHHHHHHhhhhccccceEEEEEC
Confidence            99999999988889999999999999999999999999999999865569999999999999999999999999999999


Q ss_pred             cCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhhhcceeEEEE
Q 007151          261 KPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIR  340 (616)
Q Consensus       261 ~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAVNTIv~  340 (616)
                      +||+||+||.|||++|+++|+|+.|.++++++++++++.++.++|+|+|||||||++|++|+|++++.|+.+||||||++
T Consensus       242 ~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~ld~~~~~A~~iGAvNti~~  321 (523)
T 2o7s_A          242 KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILR  321 (523)
T ss_dssp             SSCTTCCHHHHHHHHHHHTTCSEEEEEEECSCHHHHHHHTCSTTEEEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEE
T ss_pred             CCccCCccHHHHHHHHHHcCCCcEEEeEEcchHHHHHHHHhcCCCCEEEECCCCHHHHHHHhcccCHHHHHhCCCeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eccCCeEEEEecCHHHHHHHHHhhhcccCCCCC--CcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 007151          341 RQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG--GVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAR  418 (616)
Q Consensus       341 ~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~--~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~  418 (616)
                      +..+|+++||||||.|++.+|+..+....+...  ....++++|+++|+|+||+|++++++|++.|++|+++||+.++++
T Consensus       322 ~~~~gk~~g~nTD~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~  401 (523)
T 2o7s_A          322 RKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERAL  401 (523)
T ss_dssp             CTTTCCEEEECCHHHHHHHHHHHHC-------------------CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHH
T ss_pred             ecCCCeEEEEcCCHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            622789999999999999999865421100000  001246789999999999999999999999999999999999999


Q ss_pred             HHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEc
Q 007151          419 ELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  498 (616)
Q Consensus       419 ~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~  498 (616)
                      +++++++.....++++.++.....|++||+||+||.|..+..|++...+.....++|++|.|..|+|+++|+++|+.+++
T Consensus       402 ~la~~~~~~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~~~i~  481 (523)
T 2o7s_A          402 ELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVS  481 (523)
T ss_dssp             HHHHHTTC-CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTCEEEC
T ss_pred             HHHHHcCCceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCCEEEC
Confidence            99999875555555554322345899999999998765444566656677778999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHhhcccccce
Q 007151          499 GLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLLLYSFNKFHIF  543 (616)
Q Consensus       499 Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~~i~~~~~~~~~~  543 (616)
                      |++|+++||+.||++|||.++|.+.+  ++.+.+.   .+..|++
T Consensus       482 Gl~mlv~Qa~~~f~lwtg~~~~~~~~--~~~~~~~---~~~~ni~  521 (523)
T 2o7s_A          482 GSEMFVRQAYEQFEIFTGLPAPKELY--WQIMSKY---GSRENLY  521 (523)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCHHHH--HHHHHHH---SCCSSCC
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCHHHH--HHHHHHh---hhhcCcc
Confidence            99999999999999999999887766  6776543   5555553

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=100.00  E-value=7.3e-67  Score=539.12  Aligned_cols=265  Identities=29%  Similarity=0.459  Sum_probs=241.8

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      ++++|++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.++.++|+|+|||||||+++++|+|++|
T Consensus         1 ~s~~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~v~~l~~~~~~G~nVTiP~K~~v~~~ld~ls   80 (282)
T 3fbt_A            1 MSLNTSIYGLIGEKLGHSHSSYIHKLIFEKVGIKGIYNLFEVPKEKLKESVDTFKIIKCGGLNVTIPYKVEVMKELYEIS   80 (282)
T ss_dssp             --CCCEEEEEEESSCCCCHHHHHHHHHHHHHTCCEEEEEEECCGGGHHHHHHHHHHTTCCEEEECTTCTTGGGGGCSEEC
T ss_pred             CCCcceEEEEECCCccccchHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999999998  589999999988999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.+||||||+++  +|+|+||||||.||+++|++.           +.++++++++|+|+||+||+++++|.+.|+ 
T Consensus        81 ~~A~~iGAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-----------~~~~~~k~vlvlGaGGaaraia~~L~~~G~~  147 (282)
T 3fbt_A           81 EKARKIGAVNTLKFS--REGISGFNTDYIGFGKMLSKF-----------RVEIKNNICVVLGSGGAARAVLQYLKDNFAK  147 (282)
T ss_dssp             HHHHHHTCCCEEEEC--SSCEEEECCHHHHHHHHHHHT-----------TCCCTTSEEEEECSSTTHHHHHHHHHHTTCS
T ss_pred             HHHHHcCCcceEEee--CCEEEeeCCcHHHHHHHHHHc-----------CCCccCCEEEEECCcHHHHHHHHHHHHcCCC
Confidence            999999999999987  899999999999999999752           246789999999999999999999999999 


Q ss_pred             eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH
Q 007151          406 RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL  485 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l  485 (616)
                      +|+|+||+.++++++++++.  ..+++++.+  . ++|+||||||+||.|..++.|++.+.+++..+|+|++|+|.+|+|
T Consensus       148 ~v~v~nRt~~ka~~La~~~~--~~~~~~l~~--l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~l  222 (282)
T 3fbt_A          148 DIYVVTRNPEKTSEIYGEFK--VISYDELSN--L-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVETLF  222 (282)
T ss_dssp             EEEEEESCHHHHHHHCTTSE--EEEHHHHTT--C-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSCHH
T ss_pred             EEEEEeCCHHHHHHHHHhcC--cccHHHHHh--c-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCCHH
Confidence            99999999999999987663  345566654  3 689999999999998766678888888999999999999999999


Q ss_pred             HHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHH
Q 007151          486 LREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVLL  533 (616)
Q Consensus       486 l~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~~i  533 (616)
                      +++|+++||++++|++||++||++||++|||+++|.+.+  ++.++++
T Consensus       223 l~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~--~~~~~~~  268 (282)
T 3fbt_A          223 LKYARESGVKAVNGLYMLVSQAAASEEIWNDISIDEIIV--DEIFEVL  268 (282)
T ss_dssp             HHHHHHTTCEEECSHHHHHHHHHHHHHHHHTCCCCHHHH--HHHHHHH
T ss_pred             HHHHHHCcCeEeCcHHHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHH
Confidence            999999999999999999999999999999999998766  7887665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=100.00  E-value=2.8e-66  Score=541.90  Aligned_cols=267  Identities=30%  Similarity=0.494  Sum_probs=234.5

Q ss_pred             ccCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcc
Q 007151          247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  324 (616)
Q Consensus       247 r~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~  324 (616)
                      ..++++|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||++|++|+|+
T Consensus        25 ~~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~  104 (312)
T 3t4e_A           25 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDE  104 (312)
T ss_dssp             -----CCEEEEEEESCCTTCSHHHHHHHHHHHHTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSHHHHGGGCSE
T ss_pred             cccCCCceEEEEECCCccccccHHHHHHHHHHcCCCcEEEeEecCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHhhh
Confidence            35778899999999999999999999999999999999999998  4899999999999999999999999999999999


Q ss_pred             ccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC
Q 007151          325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  404 (616)
Q Consensus       325 ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G  404 (616)
                      +|+.|+.|||||||+++  ||+|+||||||.||+++|++.           +.++++|+++|+|+||+||+++++|++.|
T Consensus       105 ls~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------~~~l~gk~~lVlGAGGaaraia~~L~~~G  171 (312)
T 3t4e_A          105 LTPAAKLVGAINTIVND--DGYLRGYNTDGTGHIRAIKES-----------GFDMRGKTMVLLGAGGAATAIGAQAAIEG  171 (312)
T ss_dssp             ECHHHHHHTCCSEEEEE--TTEEEEECHHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred             cCHHHHHhCceeEEEec--CCEEEEeCCcHHHHHHHHHhc-----------CCCcCCCEEEEECcCHHHHHHHHHHHHcC
Confidence            99999999999999987  999999999999999999752           24678999999999999999999999999


Q ss_pred             C-eEEEEECC---HHHHHHHHHHHCCc------ccchhcc---cccCCCCccEEEEcCCCCCCCCCCCCcc--ccccccC
Q 007151          405 A-RVVIANRT---YDRARELAETVGGH------ALSLADL---ENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGH  469 (616)
Q Consensus       405 ~-~V~v~nRt---~~ka~~la~~~~~~------~~~~~~l---~~~~~~~~divInat~~gm~p~~~~~pi--~~~~l~~  469 (616)
                      + +|+|+||+   .+++++++++++..      ..+++++   .+ ...++|+||||||+||.|.. ..|+  +.+.+.+
T Consensus       172 ~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~-~l~~~DiIINaTp~Gm~~~~-~~~~~~~~~~l~~  249 (312)
T 3t4e_A          172 IKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE-ALASADILTNGTKVGMKPLE-NESLIGDVSLLRP  249 (312)
T ss_dssp             CSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHHCSEEEECSSTTSTTST-TCCSCCCGGGSCT
T ss_pred             CCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh-hccCceEEEECCcCCCCCCC-CCcccCCHHHcCC
Confidence            9 89999999   99999999887531      2233332   11 12358999999999998753 3444  5567888


Q ss_pred             ccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       470 ~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      ..+|+|++|+|.+|+|+++|+++||++++|++||++||++||++|||+++|.+.+  ++.+
T Consensus       250 ~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~af~lwtg~~~~~~~~--~~~l  308 (312)
T 3t4e_A          250 ELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYV--KQVM  308 (312)
T ss_dssp             TCEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHHHHHHHHHHHHHSSCCCHHHH--HHHT
T ss_pred             CCEEEEeccCCCCCHHHHHHHHCCCeEECcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHh
Confidence            8999999999999999999999999999999999999999999999999988776  5654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=100.00  E-value=3e-66  Score=535.92  Aligned_cols=263  Identities=28%  Similarity=0.405  Sum_probs=236.1

Q ss_pred             CceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccC-------cccHHHHHHHhccCCCCeEEEcccchHHHHhhhcc
Q 007151          252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLL-------VDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  324 (616)
Q Consensus       252 ~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~-------~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~  324 (616)
                      +|++|||||+||+||+||.|||++|+++|+|+.|.+++       .++++++++.++.++|+|+|||||||++|++|+|+
T Consensus         3 ~t~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~lD~   82 (283)
T 3jyo_A            3 DSILLGLIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDE   82 (283)
T ss_dssp             CCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHHTTCCEEEECTTCTTTTGGGSSE
T ss_pred             CceEEEEECCCccccccHHHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhhCCCCEEEECcccHHHHHHHhhh
Confidence            68999999999999999999999999999999999994       35899999999999999999999999999999999


Q ss_pred             ccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC
Q 007151          325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  404 (616)
Q Consensus       325 ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G  404 (616)
                      +|+.|+.+||||||++++ ||+|+||||||.||+++|++..           .++++|+++|+|+||+|++++++|++.|
T Consensus        83 l~~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~l~~~~-----------~~l~~k~vlVlGaGG~g~aia~~L~~~G  150 (283)
T 3jyo_A           83 VSEQATQLGAVNTVVIDA-TGHTTGHNTDVSGFGRGMEEGL-----------PNAKLDSVVQVGAGGVGNAVAYALVTHG  150 (283)
T ss_dssp             ECHHHHHHTCCCEEEECT-TSCEEEECHHHHHHHHHHHHHC-----------TTCCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred             CCHHHHHhCcceEEEECC-CCeEEEecCCHHHHHHHHHHhC-----------cCcCCCEEEEECCcHHHHHHHHHHHHCC
Confidence            999999999999999874 7899999999999999997531           3578999999999999999999999999


Q ss_pred             C-eEEEEECCHHHHHHHHHHHCCc-------ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          405 A-RVVIANRTYDRARELAETVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       405 ~-~V~v~nRt~~ka~~la~~~~~~-------~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      + +|+|+||+.+++++++++++..       ..+++++.+ ...++|+||||||+||.|. +..|++.+.+++..+|+|+
T Consensus       151 ~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~-~l~~~DiVInaTp~Gm~~~-~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          151 VQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIED-VIAAADGVVNATPMGMPAH-PGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHH-HHHHSSEEEECSSTTSTTS-CSCSSCGGGCCTTCEEEEC
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHH-HHhcCCEEEECCCCCCCCC-CCCCCCHHHhCCCCEEEEe
Confidence            9 8999999999999999887532       122334433 2345899999999999986 4567877888888999999


Q ss_pred             eeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       477 ~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+|.+|+|+++|+++||++++|++||++||++||++|||+++|.+.+  ++.+
T Consensus       229 vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~--~~~~  280 (283)
T 3jyo_A          229 VYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRM--RETF  280 (283)
T ss_dssp             CCSSSSCHHHHHHHHHTCCEECTHHHHHHHHHHHHHHHHSCCCCHHHH--HHHH
T ss_pred             cCCCCCCHHHHHHHHCcCeEeCcHHHHHHHHHHHHHHHcCCCCCHHHH--HHHH
Confidence            999999999999999999999999999999999999999999988876  6665

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=100.00  E-value=1.2e-65  Score=537.84  Aligned_cols=267  Identities=30%  Similarity=0.510  Sum_probs=239.6

Q ss_pred             cCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccc
Q 007151          248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV  325 (616)
Q Consensus       248 ~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~l  325 (616)
                      +++++|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||++|++|+|++
T Consensus        32 ~i~~~t~~~gviG~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVTiP~K~~v~~~lD~l  111 (315)
T 3tnl_A           32 RITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKL  111 (315)
T ss_dssp             CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCCEEEEEEECCHHHHHHHHHHHHHTTCCEEEECTTSTTTGGGGCSEE
T ss_pred             hcCCcccEEEEECCCccccccHHHHHHHHHHcCCCcEEEEEecCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHhc
Confidence            4788899999999999999999999999999999999999988  48999999999999999999999999999999999


Q ss_pred             cHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC
Q 007151          326 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA  405 (616)
Q Consensus       326 s~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~  405 (616)
                      |+.|+.|||||||+++  +|+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|++.|+
T Consensus       112 s~~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~-----------~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga  178 (315)
T 3tnl_A          112 SPAAELVGAVNTVVND--DGVLTGHITDGTGYMRALKEA-----------GHDIIGKKMTICGAGGAATAICIQAALDGV  178 (315)
T ss_dssp             CHHHHHHTCCSEEEEE--TTEEEEECCHHHHHHHHHHHT-----------TCCCTTSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred             CHHHHHhCccceEEec--CCEEEEeCCCHHHHHHHHHHc-----------CCCccCCEEEEECCChHHHHHHHHHHHCCC
Confidence            9999999999999987  899999999999999999752           246789999999999999999999999999


Q ss_pred             -eEEEEECC---HHHHHHHHHHHCC------cccchhc---ccccCCCCccEEEEcCCCCCCCCCCCCcc-ccccccCcc
Q 007151          406 -RVVIANRT---YDRARELAETVGG------HALSLAD---LENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYA  471 (616)
Q Consensus       406 -~V~v~nRt---~~ka~~la~~~~~------~~~~~~~---l~~~~~~~~divInat~~gm~p~~~~~pi-~~~~l~~~~  471 (616)
                       +|+|+||+   .+++++++++++.      ...++++   +.+ .+.++|+||||||+||.|..+..|+ +...+++..
T Consensus       179 ~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~-~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~  257 (315)
T 3tnl_A          179 KEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK-EIAESVIFTNATGVGMKPFEGETLLPSADMLRPEL  257 (315)
T ss_dssp             SEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTC
T ss_pred             CEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh-hhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCC
Confidence             99999999   9999999988753      1233333   222 2346899999999999986555677 566788889


Q ss_pred             EEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          472 LVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       472 ~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+|++|+|.+|+|+++|+++||++++|++||++||++||++|||+++|.+.+  ++++
T Consensus       258 ~V~DlvY~P~~T~ll~~A~~~G~~~~~Gl~MLv~Qa~~af~lwtG~~~p~~~~--~~~l  314 (315)
T 3tnl_A          258 IVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYI--KEIL  314 (315)
T ss_dssp             EEEESCCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             EEEEeccCCCCCHHHHHHHHCCCeEeCcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHh
Confidence            99999999999999999999999999999999999999999999999988866  5554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=100.00  E-value=4.3e-64  Score=516.86  Aligned_cols=257  Identities=25%  Similarity=0.374  Sum_probs=232.4

Q ss_pred             eEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhh
Q 007151          254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  331 (616)
Q Consensus       254 ~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~  331 (616)
                      .+|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||+++++|+|++|+.|+.
T Consensus         3 ~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~   82 (272)
T 3pwz_A            3 DRYAVIGRPINHTKSPLIHGLFAQASNQQLEYGAIEGSLDDFEAQVLQFRSEGGKGMNITAPFKLRAFELADRRSERAQL   82 (272)
T ss_dssp             EEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             cEEEEECCCcCCcccHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECchhHHHHHHHHhhCCHHHHH
Confidence            4899999999999999999999999999999999988  58999999998899999999999999999999999999999


Q ss_pred             hcceeEEEEeccCCeEEEEecCHHHHHHH-HHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEE
Q 007151          332 IGAVNCIIRRQSDGKLFGYNTDYVGAISA-IEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVI  409 (616)
Q Consensus       332 iGAVNTIv~~~~dg~l~G~NTD~~G~~~~-L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v  409 (616)
                      +||||||+++  ||+|+||||||.||+++ |++.           +.++++|+++|+|+||+|++++++|.+.|+ +|+|
T Consensus        83 iGAvNTv~~~--~g~l~G~NTD~~G~~~~lL~~~-----------~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i  149 (272)
T 3pwz_A           83 ARAANALKFE--DGRIVAENFDGIGLLRDIEENL-----------GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVI  149 (272)
T ss_dssp             HTCCSEEEEE--TTEEEEECCHHHHHHHHHHTTS-----------CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEE
T ss_pred             hCccceEEcc--CCeEEEecCCHHHHHHHHHHHc-----------CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEE
Confidence            9999999877  89999999999999999 7531           246789999999999999999999999998 9999


Q ss_pred             EECCHHHHHHHHHHHCC---cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHH
Q 007151          410 ANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL  486 (616)
Q Consensus       410 ~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll  486 (616)
                      +||+.+++++++++++.   ...+++++..   .++|+||||||+||.+.  ..+++.+.+.+..+|+|++|+|.+|+|+
T Consensus       150 ~~R~~~~a~~la~~~~~~~~~~~~~~~l~~---~~~DivInaTp~gm~~~--~~~i~~~~l~~~~~V~DlvY~P~~T~ll  224 (272)
T 3pwz_A          150 ANRDMAKALALRNELDHSRLRISRYEALEG---QSFDIVVNATSASLTAD--LPPLPADVLGEAALAYELAYGKGLTPFL  224 (272)
T ss_dssp             ECSCHHHHHHHHHHHCCTTEEEECSGGGTT---CCCSEEEECSSGGGGTC--CCCCCGGGGTTCSEEEESSCSCCSCHHH
T ss_pred             EeCCHHHHHHHHHHhccCCeeEeeHHHhcc---cCCCEEEECCCCCCCCC--CCCCCHHHhCcCCEEEEeecCCCCCHHH
Confidence            99999999999999874   2334555432   56899999999999763  2357777888999999999999999999


Q ss_pred             HHHHHcCCe-EEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          487 REAEESGAT-IVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       487 ~~A~~~G~~-~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      ++|+++|++ +++|++||++||+.||++|||+++|.+.+  ++.|
T Consensus       225 ~~A~~~G~~~~~~Gl~ML~~Qa~~~f~lwtg~~~~~~~~--~~~l  267 (272)
T 3pwz_A          225 RLAREQGQARLADGVGMLVEQAAEAFAWWRGVRPDTRAV--INQL  267 (272)
T ss_dssp             HHHHHHSCCEEECTHHHHHHHHHHHHHHHHSCCCCCHHH--HHHH
T ss_pred             HHHHHCCCCEEECCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            999999998 99999999999999999999999998876  5554

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=100.00  E-value=8e-64  Score=517.14  Aligned_cols=262  Identities=25%  Similarity=0.405  Sum_probs=230.4

Q ss_pred             CCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       249 ~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      +..+|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||+++++|+|++|
T Consensus         4 ~~~~m~~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~ld~l~   83 (281)
T 3o8q_A            4 MASQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLT   83 (281)
T ss_dssp             ----CEEEEEECCSSSCCCHHHHHHHHHHHTTCCEEEEEECCCTTCHHHHHHHHHHTTCCEEEECTTSHHHHHHHCSEEC
T ss_pred             ccccccEEEEECCCCCccCcHHHHHHHHHHcCCCcEEEEeecCHHHHHHHHHHHHhCCCCEEEECCccHHHHHHHHhhcC
Confidence            456788999999999999999999999999999999999998  589999999988999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-  405 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-  405 (616)
                      +.|+.+||||||++.+ ||+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|.+.|+ 
T Consensus        84 ~~A~~iGAVNTv~~~~-~g~l~G~NTD~~G~~~~L~~~-----------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~  151 (281)
T 3o8q_A           84 ERARLAGAVNTLKKLD-DGEILGDNTDGEGLVQDLLAQ-----------QVLLKGATILLIGAGGAARGVLKPLLDQQPA  151 (281)
T ss_dssp             HHHHHHTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHTTCCS
T ss_pred             HHHHhhCeeeEEEEcC-CCcEEEEecHHHHHHHHHHHh-----------CCCccCCEEEEECchHHHHHHHHHHHhcCCC
Confidence            9999999999999853 899999999999999999652           246789999999999999999999999998 


Q ss_pred             eEEEEECCHHHHHHHHHHHCC----cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCc
Q 007151          406 RVVIANRTYDRARELAETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  481 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~----~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~  481 (616)
                      +|+|+||+.+++++++++++.    ...+++++.    .++|+||||||.||.+.  ..+++.+.+.+..+|+|++|+|.
T Consensus       152 ~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~----~~aDiIInaTp~gm~~~--~~~l~~~~l~~~~~V~DlvY~P~  225 (281)
T 3o8q_A          152 SITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK----QSYDVIINSTSASLDGE--LPAIDPVIFSSRSVCYDMMYGKG  225 (281)
T ss_dssp             EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC----SCEEEEEECSCCCC------CSCCGGGEEEEEEEEESCCCSS
T ss_pred             eEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhc----CCCCEEEEcCcCCCCCC--CCCCCHHHhCcCCEEEEecCCCc
Confidence            999999999999999999864    223444432    56899999999999753  23567777888899999999999


Q ss_pred             ccHHHHHHHHcCCe-EEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          482 ITRLLREAEESGAT-IVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       482 ~T~ll~~A~~~G~~-~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+|+++|+++|+. +++|++||++||+.||++|||+++|.+.+  ++.|
T Consensus       226 ~T~ll~~A~~~G~~~~~~Gl~Mlv~Qa~~~f~lwtg~~~~~~~~--~~~l  273 (281)
T 3o8q_A          226 YTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQI--LREL  273 (281)
T ss_dssp             CCHHHHHHHHTTCSEEECTHHHHHHHHHHHHHHHHSCCCCHHHH--HHHH
T ss_pred             cCHHHHHHHHCCCCEEECcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999998 99999999999999999999999887765  4555

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=100.00  E-value=2.8e-64  Score=515.92  Aligned_cols=245  Identities=28%  Similarity=0.443  Sum_probs=224.6

Q ss_pred             CceEEEEeccCcccccCHHHHHHHH----HHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccH
Q 007151          252 DTKVFGIIGKPVGHSKSPILYNEAF----KSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT  327 (616)
Q Consensus       252 ~t~~~~liG~Pi~hS~SP~ihn~~f----~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~  327 (616)
                      +|++|||||+||+||+||.|||++|    +++|+|+.|.++++++++++++.++.++|+|+|||||||++|++|+|++|+
T Consensus         2 k~~~~~viG~Pi~hS~SP~~hn~~f~~~~~~~gl~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~   81 (269)
T 3phh_A            2 KLKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKG   81 (269)
T ss_dssp             CEEEEEEEESSCTTCCHHHHHHHHHHHHHHHHSSEEEEEEEECCSSSCHHHHHHHTTEEEEEECTTCHHHHHHHSSEECG
T ss_pred             CceEEEEECCCccccccHHHHHHHHHHHHHHcCCCCEEeeEEhhhHHHHHHHHhhCCCCEEEEccccHHHHHHHHhhcCH
Confidence            5889999999999999999999999    999999999999999999999999889999999999999999999999999


Q ss_pred             hHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeE
Q 007151          328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV  407 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V  407 (616)
                      .|+.+||||||+++  ||+|+||||||.||+++|++.               .+|+++|+|+||+||+++++|.+.|.+|
T Consensus        82 ~A~~iGAVNTi~~~--~g~l~G~NTD~~Gf~~~L~~~---------------~~k~vlvlGaGGaaraia~~L~~~G~~v  144 (269)
T 3phh_A           82 IALECGAVNTLVLE--NDELVGYNTDALGFYLSLKQK---------------NYQNALILGAGGSAKALACELKKQGLQV  144 (269)
T ss_dssp             GGGGTTCCCEEEEE--TTEEEEECCHHHHHHHHCC------------------CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred             HHHHhCceeEEEee--CCEEEEecChHHHHHHHHHHc---------------CCCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence            99999999999987  899999999999999996431               1789999999999999999999999999


Q ss_pred             EEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccc----cccCccEEEEEeeCCccc
Q 007151          408 VIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH----ALGHYALVFDAVYTPKIT  483 (616)
Q Consensus       408 ~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~----~l~~~~~v~Di~Y~P~~T  483 (616)
                      +|+||+.+++++++ +++....+++++.     ++|+||||||+||.|.   .|++.+    .+++..+|+|++|+| +|
T Consensus       145 ~V~nRt~~ka~~la-~~~~~~~~~~~l~-----~~DiVInaTp~Gm~~~---~~l~~~~l~~~l~~~~~v~D~vY~P-~T  214 (269)
T 3phh_A          145 SVLNRSSRGLDFFQ-RLGCDCFMEPPKS-----AFDLIINATSASLHNE---LPLNKEVLKGYFKEGKLAYDLAYGF-LT  214 (269)
T ss_dssp             EEECSSCTTHHHHH-HHTCEEESSCCSS-----CCSEEEECCTTCCCCS---CSSCHHHHHHHHHHCSEEEESCCSS-CC
T ss_pred             EEEeCCHHHHHHHH-HCCCeEecHHHhc-----cCCEEEEcccCCCCCC---CCCChHHHHhhCCCCCEEEEeCCCC-ch
Confidence            99999999999999 8875555554432     6899999999999874   356666    577789999999999 99


Q ss_pred             HHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCch
Q 007151          484 RLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNA  523 (616)
Q Consensus       484 ~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~  523 (616)
                      +|+++|+++||++++|++||++||+.||++|||+++|.+.
T Consensus       215 ~ll~~A~~~G~~~~~Gl~MLv~Qa~~~f~lw~g~~~~~~~  254 (269)
T 3phh_A          215 PFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSK  254 (269)
T ss_dssp             HHHHHHHHTTCCEECSHHHHHHHHHHHHHHHTTTSSCHHH
T ss_pred             HHHHHHHHCcCEEECCHHHHHHHHHHHHHHHhCCCCCHHH
Confidence            9999999999999999999999999999999999988774

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=100.00  E-value=2.7e-64  Score=519.18  Aligned_cols=257  Identities=32%  Similarity=0.534  Sum_probs=225.1

Q ss_pred             EEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhhh
Q 007151          255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI  332 (616)
Q Consensus       255 ~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~i  332 (616)
                      .|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++.++|+|+|||||||++|++|+|++|+.|+.+
T Consensus         2 ~~~viG~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v~~~~l~~~~~~~~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~i   81 (277)
T 3don_A            2 KFAVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSV   81 (277)
T ss_dssp             EEEEEESSCTTCCHHHHHHHHHHHTTCCCEEEEEECCGGGGGGHHHHHHHTTCSEEEECTTCTTTTGGGCSEECHHHHHH
T ss_pred             EEEEECCCccccccHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCEEEECcCCHHHHHHHhhhCCHHHHHh
Confidence            499999999999999999999999999999999998  589999999999999999999999999999999999999999


Q ss_pred             cceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEE
Q 007151          333 GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN  411 (616)
Q Consensus       333 GAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~n  411 (616)
                      ||||||+++  ||+|+||||||.||+++|++.           +.++++|+++|+|+||+|++++++|.+.|+ +|+|+|
T Consensus        82 GAVNTv~~~--~g~l~G~NTD~~G~~~~L~~~-----------~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~  148 (277)
T 3don_A           82 GAVNTVLVK--DGKWIGYNTDGIGYVNGLKQI-----------YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVAN  148 (277)
T ss_dssp             TCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred             CceeEEEec--CCEEEEECChHHHHHHHHHHh-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            999999987  899999999999999999753           146789999999999999999999999999 999999


Q ss_pred             CCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHH
Q 007151          412 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE  491 (616)
Q Consensus       412 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~  491 (616)
                      |+.++++++++.+  ....++++.+ ...++|+||||||+||.|..+ .+++.+.+++..+|+|++|+|.+|+|+++|++
T Consensus       149 R~~~~a~~la~~~--~~~~~~~~~~-~~~~aDiVInaTp~Gm~~~~~-~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~  224 (277)
T 3don_A          149 RTMSRFNNWSLNI--NKINLSHAES-HLDEFDIIINTTPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYKTPILIEAEQ  224 (277)
T ss_dssp             SCGGGGTTCCSCC--EEECHHHHHH-TGGGCSEEEECCC-------C-CSSCCTTCCSSCEEEESCCSSSSCHHHHHHHH
T ss_pred             CCHHHHHHHHHhc--ccccHhhHHH-HhcCCCEEEECccCCCCCCCc-CCCCHHHcCCCCEEEEecCCCCCCHHHHHHHH
Confidence            9999988887532  2234444444 345689999999999987643 34666778889999999999999999999999


Q ss_pred             cCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          492 SGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       492 ~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +||++++|++||++||+.||++|||+++|.+.+  ++++
T Consensus       225 ~G~~~~~Gl~MLv~Qa~~~f~lwtg~~~~~~~~--~~~l  261 (277)
T 3don_A          225 RGNPIYNGLDMFVHQGAESFKIWTNLEPDIKAM--KNIV  261 (277)
T ss_dssp             TTCCEECTHHHHHHHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             CcCEEeCCHHHHHHHHHHHHHHHcCCCCCHHHH--HHHH
Confidence            999999999999999999999999999988876  6665

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=7.9e-62  Score=499.90  Aligned_cols=260  Identities=27%  Similarity=0.391  Sum_probs=231.8

Q ss_pred             CCCCceE-EEEeccCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccH
Q 007151          249 MGPDTKV-FGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDT  327 (616)
Q Consensus       249 ~~~~t~~-~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~  327 (616)
                      ++++|++ |||||+|  ||+||.|||++|+++|+|+.|.+++.++++++++.++..+|.|+|||||||++|++++|++|+
T Consensus         2 i~~~t~~~~~viG~P--hS~SP~~hn~~~~~~gl~~~Y~~~~~~~l~~~~~~~~~~~~~G~nVTiP~K~~i~~~~d~~~~   79 (271)
T 1npy_A            2 INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIHP   79 (271)
T ss_dssp             CCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEECH
T ss_pred             cCCCceEEEEEECCC--CcccHHHHHHHHHHcCCCcEEEeechhhHHHHHHHhccCCCCeEEECcCCHHHHHHHHHHhhH
Confidence            5778999 9999999  999999999999999999999999988999999999988999999999999999999999999


Q ss_pred             hHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-e
Q 007151          328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R  406 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~  406 (616)
                      .|+.+||||||+++  +|+|+||||||.||..+|++. .          .. .+++++|+|+||+||+++++|.+.|+ +
T Consensus        80 ~A~~iGAvNTi~~~--~g~l~g~NTD~~G~~~~l~~~-~----------~~-~~~~vlvlGaGgaarav~~~L~~~G~~~  145 (271)
T 1npy_A           80 SAQAIESVNTIVND--NGFLRAYNTDYIAIVKLIEKY-H----------LN-KNAKVIVHGSGGMAKAVVAAFKNSGFEK  145 (271)
T ss_dssp             HHHTTTCCCEEEEE--TTEEEEECHHHHHHHHHHHHT-T----------CC-TTSCEEEECSSTTHHHHHHHHHHTTCCC
T ss_pred             HHHHhCCCCceECc--CCEEEeecCCHHHHHHHHHHh-C----------CC-CCCEEEEECCcHHHHHHHHHHHHCCCCE
Confidence            99999999999987  899999999999999999752 1          22 46899999999999999999999998 8


Q ss_pred             EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC--CCCCccccccccCccEEEEEeeCCcccH
Q 007151          407 VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK--VDETPIPKHALGHYALVFDAVYTPKITR  484 (616)
Q Consensus       407 V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~--~~~~pi~~~~l~~~~~v~Di~Y~P~~T~  484 (616)
                      |+|+||+.+++++++++++....+  ++   ...++|+||||||.||.|.  .+..|++...+.+..+|+|++|+|.+|+
T Consensus       146 i~v~nRt~~ka~~la~~~~~~~~~--~~---~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T~  220 (271)
T 1npy_A          146 LKIYARNVKTGQYLAALYGYAYIN--SL---ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETP  220 (271)
T ss_dssp             EEEECSCHHHHHHHHHHHTCEEES--CC---TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCH
T ss_pred             EEEEeCCHHHHHHHHHHcCCccch--hh---hcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCCH
Confidence            999999999999999998642210  11   1346899999999999864  2334566567777889999999999999


Q ss_pred             HHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHH
Q 007151          485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFV  531 (616)
Q Consensus       485 ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~  531 (616)
                      |+++|+++||++++|++||++||+.||++|||.++|.+.+  +++++
T Consensus       221 ll~~A~~~G~~~i~Gl~MLv~Qa~~~f~lw~g~~~~~~~~--~~~~~  265 (271)
T 1npy_A          221 FIRYAQARGKQTISGAAVIVLQAVEQFELYTHQRPSDELI--AEAAA  265 (271)
T ss_dssp             HHHHHHHTTCEEECHHHHHHHHHHHHHHHHHSCCCCHHHH--HHHHH
T ss_pred             HHHHHHHCCCEEECCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHHH
Confidence            9999999999999999999999999999999999887766  67764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=100.00  E-value=1e-58  Score=483.26  Aligned_cols=273  Identities=36%  Similarity=0.543  Sum_probs=239.0

Q ss_pred             hhhcccCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHh
Q 007151          243 LYNFRQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVK  320 (616)
Q Consensus       243 ~~~fr~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~  320 (616)
                      -|+++.++..|++|||||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.+++.++.|+|||||||++|++
T Consensus        13 ~~~~~~~~~~t~~~~viG~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~~~~~~l~~~v~~l~~~~~~G~nVTiP~K~~i~~   92 (297)
T 2egg_A           13 GENLYFQGHMEKVYGLIGFPVEHSLSPLMHNDAFARLGIPARYHLFSVEPGQVGAAIAGVRALGIAGVNVTIPHKLAVIP   92 (297)
T ss_dssp             -------CCCCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCTTCHHHHHHHHHHHTCCEEEECTTCTTTTGG
T ss_pred             cccceecCCceeEEEEECCCcccccCHHHHHHHHHHcCcCcEEEEEEcCHHHHHHHHHHHhhCCCCeEEECCcCHHHHHH
Confidence            378899999999999999999999999999999999999999999998  589999999988899999999999999999


Q ss_pred             hhccccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHH
Q 007151          321 CCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGA  400 (616)
Q Consensus       321 ~lD~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L  400 (616)
                      ++|++++.|+.+||||||+++  +|+|+|+|||+.||+.+|+.. .         ..++++++++|+|+||+|++++++|
T Consensus        93 ~ld~~~~~A~~iGavNti~~~--~g~l~g~nTd~~G~~~~l~~~-~---------~~~l~~~~vlVlGaGg~g~aia~~L  160 (297)
T 2egg_A           93 FLDEVDEHARRIGAVNTIINN--DGRLVGYNTDGLGYVQALEEE-M---------NITLDGKRILVIGAGGGARGIYFSL  160 (297)
T ss_dssp             GCSEECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-T---------TCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred             HHHHHhHHHHHhCCCCeEECc--CCeEeeccCCHHHHHHHHHHh-C---------CCCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999987  899999999999999999753 1         0356789999999999999999999


Q ss_pred             HHCCC-eEEEEECCHHHHHHHHHHHCC---cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE
Q 007151          401 KAKGA-RVVIANRTYDRARELAETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA  476 (616)
Q Consensus       401 ~~~G~-~V~v~nRt~~ka~~la~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di  476 (616)
                      .+.|+ +|+|+||+.+++++++++++.   ...+++++.+ ...++|+||||||.+|.|..+..+++...+.++.+|+|+
T Consensus       161 ~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~-~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~  239 (297)
T 2egg_A          161 LSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAET-RLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDI  239 (297)
T ss_dssp             HTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHH-TGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEEC
T ss_pred             HHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHh-hhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEc
Confidence            99999 999999999999999999865   3444444443 345689999999999987544445666678888999999


Q ss_pred             eeCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          477 VYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       477 ~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+|..|+|+++|+++|+++++|++||++||+.||++|||.++|.+.+  ++.+
T Consensus       240 ~y~P~~T~ll~~A~~~G~~~v~Gl~MLv~Qa~~af~~w~g~~~~~~~~--~~~~  291 (297)
T 2egg_A          240 IYNPLETKWLKEAKARGARVQNGVGMLVYQGALAFEKWTGQWPDVNRM--KQLV  291 (297)
T ss_dssp             CCSSSSCHHHHHHHHTTCEEECSHHHHHHHHHHHHHHHHSCCCCHHHH--HHHH
T ss_pred             CCCCCCCHHHHHHHHCcCEEECCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            999999999999999999999999999999999999999998877655  6666

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=100.00  E-value=6.8e-58  Score=471.23  Aligned_cols=261  Identities=23%  Similarity=0.364  Sum_probs=223.6

Q ss_pred             eEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhh
Q 007151          254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  331 (616)
Q Consensus       254 ~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~  331 (616)
                      ++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.+++++|.|+|||||||+++++++|++|+.|+.
T Consensus         2 ~~~~viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~~~~~~l~~~i~~~~~~~~~G~nVT~P~K~~v~~~ld~~~~~A~~   81 (272)
T 1p77_A            2 DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKL   81 (272)
T ss_dssp             EEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             cEEEEECCCcccccCHHHHHHHHHHCCcCeEEEEEEcCHHHHHHHHHHHHhCCCCEEEECcCCHHHHHHHHhhcCHHHHH
Confidence            6899999999999999999999999999999999998  58999999999999999999999999999999999999999


Q ss_pred             hcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE
Q 007151          332 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  411 (616)
Q Consensus       332 iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~n  411 (616)
                      +||||||+++. +|+|+||||||.||+.+|++.           +.++++|+++|+|+||+|++++++|.+.|++|+|+|
T Consensus        82 igavNti~~~~-~g~l~g~NTD~~G~~~~L~~~-----------~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~  149 (272)
T 1p77_A           82 AEACNTLKKLD-DGKLYADNTDGIGLVTDLQRL-----------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLAN  149 (272)
T ss_dssp             HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEE
T ss_pred             hCCceEEEEcc-CCEEEEecCCHHHHHHHHHHh-----------CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence            99999999842 899999999999999999752           145788999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHCCc-ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc-cHHHHHH
Q 007151          412 RTYDRARELAETVGGH-ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREA  489 (616)
Q Consensus       412 Rt~~ka~~la~~~~~~-~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll~~A  489 (616)
                      |+.++++++++.++.. .+...++++....++|+||||||.++.+..  .+++.+.+.+..+++|++|+|.. |+|+++|
T Consensus       150 R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~--~~i~~~~l~~~~~v~D~~y~p~~~t~ll~~a  227 (272)
T 1p77_A          150 RTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGT--ASVDAEILKLGSAFYDMQYAKGTDTPFIALC  227 (272)
T ss_dssp             SSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC---------CCCHHHHHHCSCEEESCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCCC--CCCCHHHcCCCCEEEEeeCCCCcCCHHHHHH
Confidence            9999999999887531 111112222101368999999999987632  24555567777899999999998 9999999


Q ss_pred             HHcCCe-EEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          490 EESGAT-IVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       490 ~~~G~~-~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +++|++ +++|++||++|++.+|++|+|.++|.+.+  +++|
T Consensus       228 ~~~G~~~~v~G~~mLv~Qa~~af~~w~g~~~~~~~~--~~~l  267 (272)
T 1p77_A          228 KSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSV--YEQL  267 (272)
T ss_dssp             HHTTCCCEECSHHHHHHHHHHHHHHHHSCCCCHHHH--HHHH
T ss_pred             HHcCCCEeeCCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            999999 99999999999999999999998776655  5665

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=100.00  E-value=8.5e-59  Score=472.83  Aligned_cols=235  Identities=37%  Similarity=0.565  Sum_probs=210.3

Q ss_pred             EEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhhh
Q 007151          255 VFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSI  332 (616)
Q Consensus       255 ~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~i  332 (616)
                      +|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.++ ++|+|+|||||||+++++|+|+ |+.|+.+
T Consensus         2 ~~~viG~pi~hS~SP~~hn~~~~~~gl~~~Y~~~~v~~~~l~~~~~~~~-~~~~G~nVT~P~K~~v~~~~d~-~~~A~~i   79 (253)
T 3u62_A            2 KFCIIGYPVRHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRIL-EEYDGFNATIPHKERVMRYVEP-SEDAQRI   79 (253)
T ss_dssp             EEEEEESSCTTCSHHHHHHHHHHHHTCCCEEEEEECCGGGHHHHHHHHH-HHCSEEEECTTCTTGGGGGSEE-CHHHHHH
T ss_pred             EEEEECCCccccccHHHHHHHHHHcCCCCEEEeEecCHHHHHHHHHHHh-hCCCceeecCChHHHHHHHhCC-CHHHHHc
Confidence            599999999999999999999999999999999998  48999999999 9999999999999999999999 9999999


Q ss_pred             cceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEE
Q 007151          333 GAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN  411 (616)
Q Consensus       333 GAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~n  411 (616)
                      ||||||++   +   +||||||.||+++|++.             ++++ +++|+|+||+|++++++|.+.|+ +|+|+|
T Consensus        80 GAvNTi~~---~---~G~NTD~~G~~~~l~~~-------------~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~n  139 (253)
T 3u62_A           80 KAVNCVFR---G---KGYNTDWVGVVKSLEGV-------------EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVN  139 (253)
T ss_dssp             TCCCEEET---T---EEECCHHHHHHHHTTTC-------------CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             CcceEeec---C---EEEcchHHHHHHHHHhc-------------CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEe
Confidence            99999974   3   99999999999997531             3567 99999999999999999999999 999999


Q ss_pred             CCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHH
Q 007151          412 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEE  491 (616)
Q Consensus       412 Rt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~  491 (616)
                      |+.+++++++++++.  ..++++.+ ...++|+||||||+||.|.  ..+++.+.+.+..+|+|++|+  .|+|+++|++
T Consensus       140 R~~~ka~~la~~~~~--~~~~~~~~-~~~~aDiVInatp~gm~p~--~~~i~~~~l~~~~~V~Divy~--~T~ll~~A~~  212 (253)
T 3u62_A          140 RTIERAKALDFPVKI--FSLDQLDE-VVKKAKSLFNTTSVGMKGE--ELPVSDDSLKNLSLVYDVIYF--DTPLVVKARK  212 (253)
T ss_dssp             SCHHHHHTCCSSCEE--EEGGGHHH-HHHTCSEEEECSSTTTTSC--CCSCCHHHHTTCSEEEECSSS--CCHHHHHHHH
T ss_pred             CCHHHHHHHHHHccc--CCHHHHHh-hhcCCCEEEECCCCCCCCC--CCCCCHHHhCcCCEEEEeeCC--CcHHHHHHHH
Confidence            999999998876542  23333332 2345899999999999886  346766678888999999999  8999999999


Q ss_pred             cCCe-EEccHHHHHHHHHHHHHHHcCCC
Q 007151          492 SGAT-IVSGLEMFIGQAYEQYERFTGLP  518 (616)
Q Consensus       492 ~G~~-~i~Gl~MLv~Qa~~qf~lwtG~~  518 (616)
                      +|++ +++|++||++||+.||++|||.+
T Consensus       213 ~G~~~~~~Gl~MLv~Qa~~af~~wtg~~  240 (253)
T 3u62_A          213 LGVKHIIKGNLMFYYQAMENLKIWGIYD  240 (253)
T ss_dssp             HTCSEEECTHHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcEEECCHHHHHHHHHHHHHHHhCCC
Confidence            9999 99999999999999999999963

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=8.2e-57  Score=462.86  Aligned_cols=258  Identities=30%  Similarity=0.447  Sum_probs=228.2

Q ss_pred             eEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHhh
Q 007151          254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKS  331 (616)
Q Consensus       254 ~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~  331 (616)
                      ++|||||+||+||+||.|||++|+++|+|+.|.++++  +++.++++.+++++|.|+|||||||+++++++|++|+.|+.
T Consensus         2 ~~~~viG~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVT~P~K~~~~~~ld~~~~~A~~   81 (271)
T 1nyt_A            2 ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAAL   81 (271)
T ss_dssp             CSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHHH
T ss_pred             CEEEEECCCcccccCHHHHHHHHHHCCCCcEEEEEEcCHHHHHHHHHHHHhCCCCeEEEccCCHHHHHHHHhhcCHHHHH
Confidence            5799999999999999999999999999999999998  58999999999999999999999999999999999999999


Q ss_pred             hcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE
Q 007151          332 IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN  411 (616)
Q Consensus       332 iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~n  411 (616)
                      +||||||+++. +|+|+||||||.||+.+|++.           +.++++|+++|+|+||+|++++++|++.|++|+++|
T Consensus        82 igavNti~~~~-~g~l~G~ntD~~G~~~~L~~~-----------~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~  149 (271)
T 1nyt_A           82 AGAVNTLMRLE-DGRLLGDNTDGVGLLSDLERL-----------SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITN  149 (271)
T ss_dssp             HTCCSEEEECT-TSCEEEECCHHHHHHHHHHHH-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hCCceEEEEcC-CCeEEEeCCCHHHHHHHHHhc-----------CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEE
Confidence            99999999842 899999999999999999752           135788999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH
Q 007151          412 RTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR  487 (616)
Q Consensus       412 Rt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~  487 (616)
                      |+.+++++++++++..    ..+++++.  . .++|+|||+||.++.+..  .+++.+.+.+..+++|++|+|..|+|++
T Consensus       150 R~~~~~~~la~~~~~~~~~~~~~~~~~~--~-~~~DivVn~t~~~~~~~~--~~i~~~~l~~~~~v~D~~y~p~~t~~~~  224 (271)
T 1nyt_A          150 RTVSRAEELAKLFAHTGSIQALSMDELE--G-HEFDLIINATSSGISGDI--PAIPSSLIHPGIYCYDMFYQKGKTPFLA  224 (271)
T ss_dssp             SSHHHHHHHHHHTGGGSSEEECCSGGGT--T-CCCSEEEECCSCGGGTCC--CCCCGGGCCTTCEEEESCCCSSCCHHHH
T ss_pred             CCHHHHHHHHHHhhccCCeeEecHHHhc--c-CCCCEEEECCCCCCCCCC--CCCCHHHcCCCCEEEEeccCCcCCHHHH
Confidence            9999999999887531    12222222  1 468999999999987532  2466667788899999999999999999


Q ss_pred             HHHHcCCe-EEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          488 EAEESGAT-IVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       488 ~A~~~G~~-~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +|+++|++ +++|++||++|++.+|++|+|..+|.+.+  ++++
T Consensus       225 ~a~~~G~~~~~~G~~mLv~Q~~~af~~w~g~~~~~~~~--~~~l  266 (271)
T 1nyt_A          225 WCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPV--IKQL  266 (271)
T ss_dssp             HHHHTTCCEEECTHHHHHHHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             HHHHcCCCeecCCHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999 99999999999999999999998776655  5655

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=100.00  E-value=7.3e-56  Score=459.35  Aligned_cols=266  Identities=37%  Similarity=0.567  Sum_probs=235.7

Q ss_pred             cCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccc
Q 007151          248 QMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEV  325 (616)
Q Consensus       248 ~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~l  325 (616)
                      +++++|++|||||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.+++.+|.|+|||||||+++++++|++
T Consensus         6 m~~~~~~~~~viG~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nVtiP~k~~i~~~~d~~   85 (287)
T 1nvt_A            6 MINAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEI   85 (287)
T ss_dssp             CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSEE
T ss_pred             hhcCCccEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEEcCHHHHHHHHHHHHhCCCCEEEEccCCHHHHHHHHHhc
Confidence            3677899999999999999999999999999999999999998  58999999998889999999999999999999999


Q ss_pred             cHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC
Q 007151          326 DTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA  405 (616)
Q Consensus       326 s~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~  405 (616)
                      ++.|+.+|||||++++  +|+|+|||||+.||+.+|++.           +.++++|+++|+|+||+|++++++|++.| 
T Consensus        86 ~~~a~~igavnt~~~~--~g~l~g~nTd~~G~~~~L~~~-----------~~~l~~k~vlV~GaGgiG~aia~~L~~~G-  151 (287)
T 1nvt_A           86 DKDAQLIGAVNTIKIE--DGKAIGYNTDGIGARMALEEE-----------IGRVKDKNIVIYGAGGAARAVAFELAKDN-  151 (287)
T ss_dssp             CHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------HCCCCSCEEEEECCSHHHHHHHHHHTSSS-
T ss_pred             CHHHHHhCceeeEEee--CCEEEEecCCHHHHHHHHHHh-----------CCCcCCCEEEEECchHHHHHHHHHHHHCC-
Confidence            9999999999999987  899999999999999999753           14578999999999999999999999999 


Q ss_pred             eEEEEECCHHHHHHHHHHHCCc-------ccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc-ccccccCccEEEEEe
Q 007151          406 RVVIANRTYDRARELAETVGGH-------ALSLADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAV  477 (616)
Q Consensus       406 ~V~v~nRt~~ka~~la~~~~~~-------~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi-~~~~l~~~~~v~Di~  477 (616)
                      +|++++|+.+++++++++++..       .+++.++.+ ...++|+|||+||.++.|..+..|+ +.+.+.+..+++|++
T Consensus       152 ~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~-~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          152 NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC-CCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHH-hhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            9999999999999998877431       122222222 3567899999999999875444556 556788889999999


Q ss_pred             eCCcccHHHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          478 YTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       478 Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      |+|..|+|+++|+++|+.+++|++||++|++.+|++|+|.++|.+.+  ++.+
T Consensus       231 y~p~~t~ll~~a~~~G~~~~~Gl~mL~~Qa~~af~~w~g~~~~~~~~--~~~~  281 (287)
T 1nvt_A          231 YNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVM--KNAI  281 (287)
T ss_dssp             CSSSSCHHHHHHHTTTCEEECTHHHHHHHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             eCCccCHHHHHHHHCCCEEeCcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999999999999999999999999999999998887665  6666

>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*

Probab=100.00  E-value=7.4e-55  Score=444.37  Aligned_cols=228  Identities=30%  Similarity=0.470  Sum_probs=204.3

Q ss_pred             cCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh----HHHHHhhhC-CCcEEEEeccCCCCCC
Q 007151           18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE----NIKTLIKES-PVPTLFTYRPIWEGGQ   92 (616)
Q Consensus        18 ~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~----~l~~l~~~~-~~PiI~T~Rt~~eGG~   92 (616)
                      .+-+.+|+|||||+++|.++++++++.+...|+|+||||+|+|++..+.+    ++..+++.. ++|+|||+|+++|||.
T Consensus        14 ~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~   93 (258)
T 4h3d_A           14 TIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGE   93 (258)
T ss_dssp             EETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCS
T ss_pred             EeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCC
Confidence            33456899999999999999999999988899999999999998865433    345555544 7999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhC-CcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEE
Q 007151           93 YDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV  170 (616)
Q Consensus        93 ~~~~~e~~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIv  170 (616)
                      +++++++|.++++.+++.| +||||||+..+++..+++.. .+++++++|+|||||++||+++++.+++.+|.++||||+
T Consensus        94 ~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIv  173 (258)
T 4h3d_A           94 KLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLP  173 (258)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence            9999999999999999988 99999999999988888764 356899999999999999999999999999999999999


Q ss_pred             EEEeecCCHhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhh
Q 007151          171 KFATTALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  245 (616)
Q Consensus       171 Kia~~~~s~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~  245 (616)
                      |+|+||++.+|+++|++++.+     .+.|+|+|+||+.|++||++++.|||++||++++++  +||||+++++|+++|+
T Consensus       174 Kia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~fGS~lTf~~~~~~--sAPGQl~~~el~~~l~  251 (258)
T 4h3d_A          174 KIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSGMGVISRLCGEIFGSALTFGAAKSV--SAPGQISFKELNSVLN  251 (258)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTGGGGGGGTCHHHHCBCEEECBCC-----CTTCCBHHHHHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCChHHHHHHHHhCCceEeccCCCC--CCCCCCCHHHHHHHHH
Confidence            999999999999999998654     378999999999999999999999999999999864  9999999999999998


Q ss_pred             cc
Q 007151          246 FR  247 (616)
Q Consensus       246 fr  247 (616)
                      ..
T Consensus       252 lL  253 (258)
T 4h3d_A          252 LL  253 (258)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=4.5e-54  Score=438.35  Aligned_cols=232  Identities=28%  Similarity=0.373  Sum_probs=209.3

Q ss_pred             cccccccCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh----hHHHHHhhhC-CCcEEEEecc
Q 007151           12 SKLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKES-PVPTLFTYRP   86 (616)
Q Consensus        12 ~~~~~~~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~Rt   86 (616)
                      .++......++.|+|||||+++|.++++.+++.+.+.|+|+||||+|+|.+.++.    ++++.+++.. ++|+|||+|+
T Consensus         8 ~~v~~~~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt   87 (257)
T 2yr1_A            8 IKVRNIWIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRS   87 (257)
T ss_dssp             EEETTEEESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred             EEEeeeeeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            4556666778899999999999999999999998889999999999999876432    3456677766 8999999999


Q ss_pred             CCCCCCC-CCCHHHHHHHHHHHHHhC-CcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHH
Q 007151           87 IWEGGQY-DGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQ  163 (616)
Q Consensus        87 ~~eGG~~-~~~~e~~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~  163 (616)
                      ++|||.+ ++++++|+++++.++++| +||||||++.++ .++++.. .+++++|+|+|||||++||+.+++.+++++|+
T Consensus        88 ~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~  166 (257)
T 2yr1_A           88 EREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAE  166 (257)
T ss_dssp             TTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHH
Confidence            9999999 999999999999999999 999999999877 5666653 35689999999999999999999999999999


Q ss_pred             HcCCCEEEEEeecCCHhHHHHHHHHhhc----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHh
Q 007151          164 ASGADIVKFATTALDITDVARVFQITVH----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKD  239 (616)
Q Consensus       164 ~~gaDIvKia~~~~s~~D~~~ll~~~~~----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~  239 (616)
                      ++||||+|+|+||++.+|++++++++.+    .+.|+|+||||+.|++||++|++|||++||+++++  ++||||+++++
T Consensus       167 ~~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~--~sAPGQl~~~e  244 (257)
T 2yr1_A          167 RYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAGWLFGSAVTFAVGNQ--SSAPGQIPIDD  244 (257)
T ss_dssp             HTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHGGGGTBCEEECBSSS--CSSTTCCBHHH
T ss_pred             hcCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHHhCCceEecCCCC--CCCCCCCCHHH
Confidence            9999999999999999999999998764    36899999999999999999999999999999985  49999999999


Q ss_pred             hhhhhhc
Q 007151          240 LLDLYNF  246 (616)
Q Consensus       240 l~~~~~f  246 (616)
                      ++++|+.
T Consensus       245 l~~~l~~  251 (257)
T 2yr1_A          245 VRTVLSI  251 (257)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*

Probab=100.00  E-value=4.2e-54  Score=442.11  Aligned_cols=231  Identities=28%  Similarity=0.439  Sum_probs=209.3

Q ss_pred             cccccCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh----hHHHHHhhhC-CCcEEEEeccCC
Q 007151           14 LVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR----ENIKTLIKES-PVPTLFTYRPIW   88 (616)
Q Consensus        14 ~~~~~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~----~~l~~l~~~~-~~PiI~T~Rt~~   88 (616)
                      +..-..-+.+|+|||||+++|.++++.+++.+...|+|+||||+|+|++.++.    ++++.+|+.. ++|+|||+|+++
T Consensus        30 v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~  109 (276)
T 3o1n_A           30 VRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAK  109 (276)
T ss_dssp             ETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGG
T ss_pred             ECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhh
Confidence            44445556689999999999999999999998768999999999999976542    3455666666 899999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhC-CcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcC
Q 007151           89 EGGQYDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASG  166 (616)
Q Consensus        89 eGG~~~~~~e~~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~g  166 (616)
                      |||.++.++++|+++++.++++| +||||||+..+++.++++.. .+++++|||+|||||++||+.++|.+++++|+++|
T Consensus       110 eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~G  189 (276)
T 3o1n_A          110 EGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELG  189 (276)
T ss_dssp             GTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT
T ss_pred             hCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcC
Confidence            99999999999999999999999 99999999999988888874 35689999999999999999999999999999999


Q ss_pred             CCEEEEEeecCCHhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhh
Q 007151          167 ADIVKFATTALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLL  241 (616)
Q Consensus       167 aDIvKia~~~~s~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~  241 (616)
                      |||+|+|+||++.+|+++|++++.+     .++|+|+||||+.|++||++|++|||++||+++++  ++||||+++++|+
T Consensus       190 aDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~vTf~~l~~--~sAPGQl~~~~l~  267 (276)
T 3o1n_A          190 ADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKK--ASAPGAISVADLR  267 (276)
T ss_dssp             CSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGGTHHHHCHHHHTCCEEECBSSC--CSSTTCCBHHHHH
T ss_pred             CCEEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCCchhhHHHHHHHhCCceEecCCCC--CCCCCCCCHHHHH
Confidence            9999999999999999999998754     47899999999999999999999999999999975  4999999999999


Q ss_pred             hhhhc
Q 007151          242 DLYNF  246 (616)
Q Consensus       242 ~~~~f  246 (616)
                      ++|+.
T Consensus       268 ~~l~~  272 (276)
T 3o1n_A          268 TVLTI  272 (276)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*

Probab=100.00  E-value=5.2e-54  Score=433.57  Aligned_cols=222  Identities=26%  Similarity=0.397  Sum_probs=196.9

Q ss_pred             CeEEEEeecC-CCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh---hHHHHHhhhC-CCcEEEEeccCCCCCCCCCCH
Q 007151           23 PTLICVPIMG-ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKES-PVPTLFTYRPIWEGGQYDGDE   97 (616)
Q Consensus        23 ~~~Icv~l~~-~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~---~~l~~l~~~~-~~PiI~T~Rt~~eGG~~~~~~   97 (616)
                      +|+|||||++ +|.++++++++.+.+.|+|+||||+|+|.+.+..   ++++.+++.. ++|+|||+|+++|||.++.++
T Consensus         3 ~p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~   82 (238)
T 1sfl_A            3 HVEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTN   82 (238)
T ss_dssp             CCEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCH
T ss_pred             CCeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCH
Confidence            5799999999 9999999999988888999999999999876432   3345566555 799999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCcEEEEEccc--chhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Q 007151           98 NERVDVLRLAMEL-GADYIDVELQV--AREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFA  173 (616)
Q Consensus        98 e~~~~ll~~~~~~-g~dyvDIEl~~--~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia  173 (616)
                      ++|+++++.+++. ++||||||++.  +++..+++.. .+++++|+|+|||||++||+.+++.+++++|+++||||+|+|
T Consensus        83 ~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia  162 (238)
T 1sfl_A           83 DSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLA  162 (238)
T ss_dssp             HHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence            9999999999998 59999999999  8877777764 356789999999999999999999999999999999999999


Q ss_pred             eecCCHhHHHHHHHHhhc----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhc
Q 007151          174 TTALDITDVARVFQITVH----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  246 (616)
Q Consensus       174 ~~~~s~~D~~~ll~~~~~----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~f  246 (616)
                      +||++.+|++++++++.+    .+.|+|+|+||+.|++||++|++|||++||++++++  +||||+++++++++|+.
T Consensus       163 ~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~~--sAPGQl~~~el~~~l~~  237 (238)
T 1sfl_A          163 VMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEP--QAPGQIDVTDLKAQVTL  237 (238)
T ss_dssp             ECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSCC--SSTTCCBHHHHHHHHTT
T ss_pred             ecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCCchHHHHHHHHhCCCeeecCCCCC--CCCCCCCHHHHHHHHHh
Confidence            999999999999998765    478999999999999999999999999999999864  99999999999999864

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=100.00  E-value=7.2e-52  Score=426.92  Aligned_cols=265  Identities=30%  Similarity=0.516  Sum_probs=232.5

Q ss_pred             ccCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcc
Q 007151          247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  324 (616)
Q Consensus       247 r~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~  324 (616)
                      .+++.+|++||+||+|++||+||.|||++|+++|+|+.|.++++  +++.++++.++++++.|+|||+|||+++++++|+
T Consensus         6 ~~~~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~~~~G~nvtiP~k~~i~~~ld~   85 (275)
T 2hk9_A            6 HMINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDY   85 (275)
T ss_dssp             -CCCTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEECCGGGHHHHHHHHHHHTCCEEEECTTSTTTTGGGCSE
T ss_pred             ccccCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEECCHHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHHH
Confidence            47889999999999999999999999999999999999999988  5899999999888999999999999999999999


Q ss_pred             ccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCC
Q 007151          325 VDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG  404 (616)
Q Consensus       325 ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G  404 (616)
                      +++.|+.+||||||+++  +|++.|+|||+.||+.+|++.           +.++++++++|+|+|++|+++++.|.+.|
T Consensus        86 l~~~A~~~gavnti~~~--~g~~~g~nTd~~G~~~~l~~~-----------~~~~~~~~v~iiGaG~~g~aia~~L~~~g  152 (275)
T 2hk9_A           86 VEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSL-----------IPEVKEKSILVLGAGGASRAVIYALVKEG  152 (275)
T ss_dssp             ECHHHHHHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHH-----------CTTGGGSEEEEECCSHHHHHHHHHHHHHT
T ss_pred             hhHHHHHhCCcceEEee--CCEEEeecCCHHHHHHHHHHh-----------CCCcCCCEEEEECchHHHHHHHHHHHHcC
Confidence            99999999999999987  899999999999999999752           13577899999999999999999999999


Q ss_pred             CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccH
Q 007151          405 ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR  484 (616)
Q Consensus       405 ~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~  484 (616)
                      ++|+++||+.+++++++++++....  +++.+ ...++|+||+|||.++.|.... +++...++++.+++|++|  ..|+
T Consensus       153 ~~V~v~~r~~~~~~~l~~~~g~~~~--~~~~~-~~~~aDiVi~atp~~~~~~~~~-~i~~~~l~~g~~viDv~~--~~t~  226 (275)
T 2hk9_A          153 AKVFLWNRTKEKAIKLAQKFPLEVV--NSPEE-VIDKVQVIVNTTSVGLKDEDPE-IFNYDLIKKDHVVVDIIY--KETK  226 (275)
T ss_dssp             CEEEEECSSHHHHHHHTTTSCEEEC--SCGGG-TGGGCSEEEECSSTTSSTTCCC-SSCGGGCCTTSEEEESSS--SCCH
T ss_pred             CEEEEEECCHHHHHHHHHHcCCeee--hhHHh-hhcCCCEEEEeCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC--ChHH
Confidence            9999999999999999877653322  12323 2346899999999998764322 454456788899999999  6899


Q ss_pred             HHHHHHHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHHHH
Q 007151          485 LLREAEESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFFVL  532 (616)
Q Consensus       485 ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l~~  532 (616)
                      ++++|+++|+++++|+.|+++|++.+|++|+|.++|.+.+  ++.+.+
T Consensus       227 ll~~a~~~g~~~v~g~~mlv~q~~~a~~~w~g~~~~~~~~--~~~~~~  272 (275)
T 2hk9_A          227 LLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVA--ERSVRD  272 (275)
T ss_dssp             HHHHHHHTTCEEECSHHHHHHHHHHHHHHHHCCCCCHHHH--HHHHHH
T ss_pred             HHHHHHHCcCEEECCHHHHHHHHHHHHHHHHCCCCCHHHH--HHHHHH
Confidence            9999999999999999999999999999999998776655  777643

>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}

Probab=100.00  E-value=3.7e-52  Score=423.10  Aligned_cols=221  Identities=24%  Similarity=0.370  Sum_probs=186.6

Q ss_pred             cCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-CCCcEEEEeccCCCCCCCCCC
Q 007151           18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-SPVPTLFTYRPIWEGGQYDGD   96 (616)
Q Consensus        18 ~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~-~~~PiI~T~Rt~~eGG~~~~~   96 (616)
                      .+.+++|+|||||+++|.++++ ++..+...|+|+||||+|+|++.+..+...++++. .++|+|||+|+++|||.++.+
T Consensus        29 ~~g~g~pkIcvpl~~~t~~e~~-~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~~~~~PiI~T~Rt~~EGG~~~~~  107 (259)
T 3l9c_A           29 QMGRGSMKIVVPVMPQNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLS  107 (259)
T ss_dssp             -----CCEEEEEECCSSHHHHH-HCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCC
T ss_pred             EECCCCcEEEEEecCCCHHHHH-HHHHhhccCCCEEEEEeccccchhHHHHHHHHHHhcCCCcEEEEEeehhhCCCCCCC
Confidence            3456789999999999999997 55555567999999999999854333333445544 589999999999999999999


Q ss_pred             HHHHHHHHHHHHH-hCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEee
Q 007151           97 ENERVDVLRLAME-LGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT  175 (616)
Q Consensus        97 ~e~~~~ll~~~~~-~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~  175 (616)
                      +++|+++++.+++ +++||||||++.+++.++++.    +.+|||+|||||++||+  ++.++|++|.++||||+|+|+|
T Consensus       108 ~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~----~~~kiI~S~Hdf~~tp~--el~~~~~~~~~~GaDIvKia~~  181 (259)
T 3l9c_A          108 NEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMY----DFSNLILSYHNFEETPE--NLMEVFSELTALAPRVVKIAVM  181 (259)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGT----TCSSEEEEEEESSCCCT--THHHHHHHHHHTCCSEEEEEEC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHH----hcCeEEEEeccCCCCHH--HHHHHHHHHHHcCCCEEEEEec
Confidence            9999999999998 789999999999888887774    34599999999999998  8999999999999999999999


Q ss_pred             cCCHhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcc
Q 007151          176 ALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  247 (616)
Q Consensus       176 ~~s~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr  247 (616)
                      |++.+|+++|++++.+     .+.|+|+|+||+.|++||++|++|||++||++++++  +||||+++++|+++|+..
T Consensus       182 a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~lTf~~l~~~--sAPGQl~~~el~~~l~~l  256 (259)
T 3l9c_A          182 PKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASLEQE--SAPGQISLADMRKIKEVL  256 (259)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHCTTSEEEEEECTGGGHHHHHTHHHHTBSEEECBC---------CCBHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhccCCCCEEEEECCCCcccHHHHHHHhCCccccccCCCC--CCCCCCCHHHHHHHHHHH
Confidence            9999999999999754     368999999999999999999999999999999864  999999999999998753

>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}

Probab=100.00  E-value=2.9e-52  Score=418.66  Aligned_cols=217  Identities=25%  Similarity=0.318  Sum_probs=186.7

Q ss_pred             CCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhh-C-CCcEEEEeccCCCCCCCCCCHHH
Q 007151           22 NPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-S-PVPTLFTYRPIWEGGQYDGDENE   99 (616)
Q Consensus        22 ~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~-~-~~PiI~T~Rt~~eGG~~~~~~e~   99 (616)
                      +.|+|||||+++|.++++.+++.+. .++|+||||+|+|.+.+ .+.+...++. . ++|+|||+|+++|||.++.++++
T Consensus         2 ~~~~Icvpi~~~t~~e~~~~~~~~~-~~~D~vElRvD~l~~~~-~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~   79 (231)
T 2ocz_A            2 NAMRIVAPVMPRHFDEAQAIDISKY-EDVNLIEWRADFLPKDE-IVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQE   79 (231)
T ss_dssp             -CCEEEEEECCSSHHHHHTCCGGGG-TTCSEEEEEGGGSCGGG-HHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHH
T ss_pred             CCCEEEEEeCCCCHHHHHHHHHHhc-cCCCEEEEEeccccccC-HHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHH
Confidence            6789999999999999999988854 48999999999998654 3344433322 3 39999999999999999999999


Q ss_pred             HHHHHHHHHHhC-CcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCC
Q 007151          100 RVDVLRLAMELG-ADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALD  178 (616)
Q Consensus       100 ~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s  178 (616)
                      |+++++.++++| +||||||++.++++++.+   +. .+|+|+|||||++||  +++.++|++|+++||||+|+|+||++
T Consensus        80 ~~~ll~~~~~~g~~d~iDvEl~~~~~~i~~~---~~-~~kvI~S~Hdf~~tp--~el~~~~~~~~~~gaDivKia~~a~~  153 (231)
T 2ocz_A           80 YVDIIKEINAIYNPDYIDFEYFTHKSVFQEM---LD-FPNLILSYHNFEETP--ENLMEAFSEMTKLAPRVVKIAVMPQS  153 (231)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTTTGGGGGGG---TT-CSSEEEEEEESSCCC--TTHHHHHHHHHHTCCSEEEEEECCSS
T ss_pred             HHHHHHHHHHcCCCCEEEEECCCCHHHHHHh---hc-CCeEEEEecCCCCCH--HHHHHHHHHHHHcCCCEEEEEeecCC
Confidence            999999999998 999999999987765544   33 499999999999999  89999999999999999999999999


Q ss_pred             HhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhccc
Q 007151          179 ITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFRQ  248 (616)
Q Consensus       179 ~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr~  248 (616)
                      .+|+++|++++.+     .+.|+|+|+||+.|++||++|++|||++||++++++  +||||+++++++++++...
T Consensus       154 ~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~Tf~~l~~~--sAPGQl~~~el~~~l~~l~  226 (231)
T 2ocz_A          154 EQDVLDLMNYTRGFKTLNPEQEFATISMGKLGRLSRFAGDVIGSSWTYVSLDHV--SGPGQVTLNDMKRIIEVLE  226 (231)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHGGGGGCHHHHTCCEEECBC--------CCCBHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhccCCCCEEEEEcCCCchhHHHHHHHhCCceEeccCCCC--CCCCCCCHHHHHHHHHHhh
Confidence            9999999998754     367999999999999999999999999999999764  9999999999999987543

>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A

Probab=100.00  E-value=2.7e-50  Score=401.44  Aligned_cols=210  Identities=29%  Similarity=0.415  Sum_probs=183.5

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChh---hHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~---~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~  101 (616)
                      +|||||+++|.++++++++.   .|+|+||||+|+|.+.+..   ++++.+++. ++|+|||+|+++|||.   ++++|+
T Consensus         2 ~icv~l~~~~~~~~~~~~~~---~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~---~~~~~~   74 (219)
T 2egz_A            2 LIAVPLDDTNFSENLKKAKE---KGADIVELRVDQFSDTSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGR---EVKNRE   74 (219)
T ss_dssp             EEEEEECSTTHHHHHHHHHH---HTCSEEEEEGGGCSCCCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCC---CCTTHH
T ss_pred             EEEEEeCCCCHHHHHHHHHH---cCCCEEEEEeccccccCHHHHHHHHHHHHhc-CCcEEEEEeehhccCC---CHHHHH
Confidence            59999999999999887765   4899999999999876542   345556654 7999999999999999   678899


Q ss_pred             HHHHHHHHhCCcEEEEEcccch--hhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCH
Q 007151          102 DVLRLAMELGADYIDVELQVAR--EFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDI  179 (616)
Q Consensus       102 ~ll~~~~~~g~dyvDIEl~~~~--~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~  179 (616)
                      ++++.++++ +||||||++.++  +.+.++.  +..++|+|+|||||++||+.+++.+++++|+++|| |+|+|+||++.
T Consensus        75 ~ll~~~~~~-~d~iDvEl~~~~~~~~l~~~~--~~~g~kvI~S~Hdf~~tp~~~el~~~~~~~~~~ga-ivKia~~a~~~  150 (219)
T 2egz_A           75 ELFEELSPL-SDYTDIELSSRGLLVKLYNIT--KEAGKKLIISYHNFELTPPNWIIREVLREGYRYGG-IPKIAVKANSY  150 (219)
T ss_dssp             HHHHHHTTT-SSEEEEETTCHHHHHHHHHHH--HHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTS-EEEEEEECSSH
T ss_pred             HHHHHHHhc-CCEEEEEccCCccHHHHHHHH--HHcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCC-EEEEEEccCCH
Confidence            999999999 999999999851  2222222  23568999999999999999999999999999998 99999999999


Q ss_pred             hHHHHHHHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhcc
Q 007151          180 TDVARVFQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNFR  247 (616)
Q Consensus       180 ~D~~~ll~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~fr  247 (616)
                      +|++++++++.+.+.|+|+|+||+.|++||++|++|||++||+++++  ++||||+++++++++|+..
T Consensus       151 ~D~l~ll~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tf~~l~~--~sAPGQl~~~el~~~l~~l  216 (219)
T 2egz_A          151 EDVARLLCISRQVEGEKILISMGDYGKISRLAGYVFGSVITYCSLEK--AFAPGQIPLEEMVELRKKF  216 (219)
T ss_dssp             HHHHHHHHHHTTSCSCBEEEEESSGGGGHHHHGGGGTBCEEECBCC-----CTTCCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCEEEEECCCcchhHHHHHHHhCCceEecCCCC--CCCCCCCCHHHHHHHHHHh
Confidence            99999999998888999999999999999999999999999999975  4999999999999998754

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=100.00  E-value=2.1e-48  Score=398.04  Aligned_cols=255  Identities=34%  Similarity=0.525  Sum_probs=226.2

Q ss_pred             ceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHh
Q 007151          253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  330 (616)
Q Consensus       253 t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~  330 (616)
                      +++|||||+|++||+||.|||++|+++|+++.|.++++  +++.++++.++.. +.|+|||+|||+++++++|++++.|+
T Consensus         1 ~~~~~~~G~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~~~~~l~~~i~~l~~~-~~G~~vt~P~k~~i~~~~~~l~~~a~   79 (263)
T 2d5c_A            1 MLRFAVLGHPVAHSLSPAMHAFALESLGLEGSYEAWDTPLEALPGRLKEVRRA-FRGVNLTLPLKEAALAHLDWVSPEAQ   79 (263)
T ss_dssp             CEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHH-CSEEEECTTCTTGGGGGCSEECHHHH
T ss_pred             CeEEEEECCCcccccCHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHhcccc-CceEEEcccCHHHHHHHHHHHhHHHH
Confidence            46899999999999999999999999999999999977  5799999988776 99999999999999999999999999


Q ss_pred             hhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE
Q 007151          331 SIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA  410 (616)
Q Consensus       331 ~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~  410 (616)
                      .+|+|||++++  +|++.|+|||+.|++.+|++.           +.++++ +++|+|+|++|+++++.|.+.|++|+++
T Consensus        80 ~~gavn~i~~~--~g~~~g~ntd~~g~~~~l~~~-----------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~  145 (263)
T 2d5c_A           80 RIGAVNTVLQV--EGRLFGFNTDAPGFLEALKAG-----------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVW  145 (263)
T ss_dssp             HHTCCCEEEEE--TTEEEEECCHHHHHHHHHHHT-----------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred             HhCCCCcEEcc--CCeEEEeCCCHHHHHHHHHHh-----------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEE
Confidence            99999999986  899999999999999998752           146788 9999999999999999999999999999


Q ss_pred             ECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHH
Q 007151          411 NRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAE  490 (616)
Q Consensus       411 nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~  490 (616)
                      ||+.+++++++++++..   ++++.+ . .++|+||++||.++.+... .+++...++++.+++|+.|+|.+|++++.++
T Consensus       146 ~r~~~~~~~l~~~~~~~---~~~~~~-~-~~~Divi~~tp~~~~~~~~-~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~  219 (263)
T 2d5c_A          146 NRTPQRALALAEEFGLR---AVPLEK-A-REARLLVNATRVGLEDPSA-SPLPAELFPEEGAAVDLVYRPLWTRFLREAK  219 (263)
T ss_dssp             CSSHHHHHHHHHHHTCE---ECCGGG-G-GGCSEEEECSSTTTTCTTC-CSSCGGGSCSSSEEEESCCSSSSCHHHHHHH
T ss_pred             ECCHHHHHHHHHHhccc---hhhHhh-c-cCCCEEEEccCCCCCCCCC-CCCCHHHcCCCCEEEEeecCCcccHHHHHHH
Confidence            99999999999988754   233334 2 5689999999999876432 2344456788889999999999999999999


Q ss_pred             HcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          491 ESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       491 ~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      ++|+++++|+.|+++|++.+|++|+|.++|.+.+  ++.+
T Consensus       220 ~~g~~~v~g~~mlv~q~~~a~~~w~g~~~~~~~~--~~~~  257 (263)
T 2d5c_A          220 AKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGM--EEAA  257 (263)
T ss_dssp             HTTCEEECSHHHHHHHHHHHHHHHHSCCCCHHHH--HHHH
T ss_pred             HCcCEEECcHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            9999999999999999999999999998876655  6665

>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}

Probab=100.00  E-value=9.6e-49  Score=383.43  Aligned_cols=192  Identities=28%  Similarity=0.448  Sum_probs=176.3

Q ss_pred             EEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHH
Q 007151           27 CVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRL  106 (616)
Q Consensus        27 cv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~  106 (616)
                      +|||+++|.++ +++++.     +|+||||+|+|.+.        ++ ..++|+|||+|+++|||.++.++++|+++++.
T Consensus         2 ~vpl~~~t~~~-~~~~~~-----aD~vElRvD~l~~~--------lr-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~   66 (196)
T 2ox1_A            2 KLVATLSSPEE-LELAEK-----ADVVELRIDLFDFS--------GA-RVDKEKILTCRRVSDGGKFEGDERERIEKMKR   66 (196)
T ss_dssp             EEEEEECSHHH-HHHTTT-----CSEEEEETTTSCCT--------TS-CCCSEEEEECCBGGGTSSBCSCHHHHHHHHHH
T ss_pred             eeeEcCCCHHH-HHHHhc-----CCEEEEEEchhhhh--------HH-hcCCcEEEEEeecccCCCCCCCHHHHHHHHHH
Confidence            68999999999 876553     89999999999863        33 56899999999999999999999999999999


Q ss_pred             HHHhCC-cEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHH
Q 007151          107 AMELGA-DYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARV  185 (616)
Q Consensus       107 ~~~~g~-dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~D~~~l  185 (616)
                      ++++|+ ||||||++.+++.++       +++|+|+|||||++||+++++.++++  +++| ||+|+|+||++.+|++++
T Consensus        67 ~~~~g~~d~iDvEl~~~~~~i~-------~~~kvI~S~Hdf~~tp~~~~l~~~~~--~~~g-DivKia~~a~~~~D~l~l  136 (196)
T 2ox1_A           67 AFDSLNPDYVDLESDLPDSAFD-------FNCRIIESYHNFIRTPDYSELKGIVE--GRRG-DLVKIATMGKSKRDVETI  136 (196)
T ss_dssp             HHHHHCCSEEEEETTSCGGGCC-------CSSEEEEEEEESSCCCCHHHHHHHHH--TCCS-SEEEEEEECCSHHHHHHH
T ss_pred             HHHhCCCcEEEEECCCCHhHHh-------CCCEEEEEecCCCCCcCHHHHHHHHH--HHcC-CEEEEEEcCCCHHHHHHH
Confidence            999998 999999998876531       78999999999999999999999999  8899 999999999999999999


Q ss_pred             HHHhhcCCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhhc
Q 007151          186 FQITVHSQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF  246 (616)
Q Consensus       186 l~~~~~~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~f  246 (616)
                      ++++.+.+ |+|+|+||+.|++||++|++|||++||+++++  ++||||+++++++++|+.
T Consensus       137 l~~~~~~~-p~I~~~MG~~G~~SRi~~~~~gs~~t~~~~~~--~sAPGQl~~~el~~~l~~  194 (196)
T 2ox1_A          137 VRILTNYD-DVVAFLMGERFSFTRVLAAYLGSPFIYCYVGS--PKAPGQISLDDAREIISR  194 (196)
T ss_dssp             HHHHHHCS-SEEEEEESGGGTHHHHHHHHTTCSEEEEESSS--CSSTTCCBHHHHHHHHHH
T ss_pred             HHHHhhCC-CeEEEEcCCCchhHHHhHhhhCCceEeccCCC--CCCCCCCCHHHHHHHHHH
Confidence            99988765 99999999999999999999999999999965  499999999999999874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=100.00  E-value=1.7e-37  Score=321.23  Aligned_cols=244  Identities=18%  Similarity=0.180  Sum_probs=198.7

Q ss_pred             cCcccccCHHHHHHHHH-----HcCCCeeEeccCc--ccHHHHHHHh-ccCCCCeEEEcccchH-HHHhhhccccHhHhh
Q 007151          261 KPVGHSKSPILYNEAFK-----SVGFNGVFVHLLV--DDIAKFFQTY-SSNDFAGFSCTIPHKE-AAVKCCDEVDTVAKS  331 (616)
Q Consensus       261 ~Pi~hS~SP~ihn~~f~-----~lgl~~~Y~~~~~--~~l~~~~~~l-~~~~~~G~nVT~P~K~-~v~~~lD~ls~~A~~  331 (616)
                      +||.||+||.|||.+|+     .+|+++.|.++++  +++.++++.+ ...+..|+|+|.|||. ..+..++++.+.++.
T Consensus         2 ~~i~hs~sp~~h~~~~~~~~~~~~g~~~~y~~~~v~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~~~   81 (287)
T 1lu9_A            2 KKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNVTPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAVKK   81 (287)
T ss_dssp             CCEEEEEESSSSCCHHHHHHHHHTTCSEEEEESSCCTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHHHH
T ss_pred             CceEEEccCCCCCCchhhheeeccCcceEeccCCcCHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHHHH
Confidence            69999999999999999     5999999999998  6899999885 6778999999999976 445566666666665


Q ss_pred             --hcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEc-cchhHHHHHHHHHHCCCeEE
Q 007151          332 --IGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIG-AGGAGKALAYGAKAKGARVV  408 (616)
Q Consensus       332 --iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlG-AGGagrAia~~L~~~G~~V~  408 (616)
                        +|||||++..  +  +.|+|||+.||+.+|++.+.          .++++|+++|+| +||+|+++++.|++.|++|+
T Consensus        82 ~~~gavnt~~~~--~--~~G~nTd~~g~~~~l~~~~~----------~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~  147 (287)
T 1lu9_A           82 RFFGPFRVSCML--D--SNGSNTTAAAGVALVVKAAG----------GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVV  147 (287)
T ss_dssp             HCBTTBCCEEEE--C--STTHHHHHHHHHHHHHHHTT----------SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEE
T ss_pred             hcCCCeEEEEec--C--CCcCCchHHHHHHHHHHhhc----------cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEE
Confidence              5999999876  4  57999999999999875311          356789999999 79999999999999999999


Q ss_pred             EEECCHHHHHHHHHHHCC----cc--cch---hcccccCCCCccEEEEcCCCCCCCCCCCCcc-ccccccCccEEEEEee
Q 007151          409 IANRTYDRARELAETVGG----HA--LSL---ADLENFNPEDGMILANTTSIGMQPKVDETPI-PKHALGHYALVFDAVY  478 (616)
Q Consensus       409 v~nRt~~ka~~la~~~~~----~~--~~~---~~l~~~~~~~~divInat~~gm~p~~~~~pi-~~~~l~~~~~v~Di~Y  478 (616)
                      +++|+.++++++++++..    ..  .++   +++.+ ....+|+|||+||.++.+.    ++ +...+.+...++|++|
T Consensus       148 i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~DvlVn~ag~g~~~~----~~~~~~~~~~~~~~~dvn~  222 (287)
T 1lu9_A          148 LCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE-AVKGAHFVFTAGAIGLELL----PQAAWQNESSIEIVADYNA  222 (287)
T ss_dssp             EEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH-HTTTCSEEEECCCTTCCSB----CHHHHTTCTTCCEEEECCC
T ss_pred             EEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHH-HHHhCCEEEECCCccccCC----ChhHcCchHHHHHHHHhhh
Confidence            999999999999877632    11  233   22222 2455899999999887542    22 1223467789999999


Q ss_pred             CCcc----cHHHHHH------HHcCCeEEccHHHHHHHHHHHHHHHcCCCCCCchH
Q 007151          479 TPKI----TRLLREA------EESGATIVSGLEMFIGQAYEQYERFTGLPGKMNAP  524 (616)
Q Consensus       479 ~P~~----T~ll~~A------~~~G~~~i~Gl~MLv~Qa~~qf~lwtG~~~p~~~~  524 (616)
                      .|..    |+|++.|      ++.|+.+++|++|+++||..+ ++|+|.++-.+..
T Consensus       223 ~~~~~i~~t~ll~~a~~~~~~~~~G~~~v~gl~ml~~qa~~a-~~~~~~~~~~d~~  277 (287)
T 1lu9_A          223 QPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIA-KLFESSEGVFDAE  277 (287)
T ss_dssp             SSSCSBTTSCTTCEEEEETTEEEECHHHHHHHHHHHHHHHHH-HHTSCSCCEESHH
T ss_pred             hhhHHhhcchHHhhccccCCCccccceeECchHHHHHHHHHH-HHhhCCCcccCHH
Confidence            9999    9999999      999999999999999999999 9999987544433

>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*

Probab=99.98  E-value=7.9e-35  Score=315.58  Aligned_cols=234  Identities=19%  Similarity=0.243  Sum_probs=185.3

Q ss_pred             CCCCceEEE--EeccCcccccCHHHHHHH--HHHc-CCCeeEeccCcc---cHHHHHHHhccCCCCeEEE---cccchHH
Q 007151          249 MGPDTKVFG--IIGKPVGHSKSPILYNEA--FKSV-GFNGVFVHLLVD---DIAKFFQTYSSNDFAGFSC---TIPHKEA  317 (616)
Q Consensus       249 ~~~~t~~~~--liG~Pi~hS~SP~ihn~~--f~~l-gl~~~Y~~~~~~---~l~~~~~~l~~~~~~G~nV---T~P~K~~  317 (616)
                      ++..|+++|  ++|.   ||.||.|||++  |+++ |+|+.|.+++++   +|.++++.+. ++|+|+||   |+|||++
T Consensus        69 vtdgt~ilGlG~iG~---hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~-~~f~GinvED~T~P~k~~  144 (439)
T 2dvm_A           69 VSDGSRILGLGNIGP---LAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIA-PTFGGINLEDIASPKCFY  144 (439)
T ss_dssp             EECSTTBTTTBCCCH---HHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTG-GGCSEEEECSCCTTHHHH
T ss_pred             EECCCeEecccceec---cccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhC-ccCcEEEEEeCCCchHHH
Confidence            444577777  8998   99999999976  9999 899999999993   5666666666 79999999   9999999


Q ss_pred             HHhhhccccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHH
Q 007151          318 AVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALA  397 (616)
Q Consensus       318 v~~~lD~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia  397 (616)
                      +++++|+         ||||+++.+ |+++.| |||+.||+++|+..           +.++++++++|+||||+|++++
T Consensus       145 il~~l~~---------avNt~vf~d-D~~gtg-ntd~aG~~~AL~~~-----------g~~l~~~rvlvlGAGgAg~aia  202 (439)
T 2dvm_A          145 ILERLRE---------ELDIPVFHD-DQQGTA-AVVLAGLLNALKVV-----------GKKISEITLALFGAGAAGFATL  202 (439)
T ss_dssp             HHHHHHH---------HCSSCEEEH-HHHHHH-HHHHHHHHHHHHHH-----------TCCTTTCCEEEECCSHHHHHHH
T ss_pred             HHHHHHH---------hcCEEEEeC-CCcEEe-ehHHHHHHHHHHHh-----------CCCccCCEEEEECccHHHHHHH
Confidence            9999986         999999863 788999 99999999999752           1357889999999999999999


Q ss_pred             HHHHHCCC---eEEEEE----CC--HHHHHH---HH---HHHCCcc---cchhcccccCCCCccEEEEcCCC--CCCCCC
Q 007151          398 YGAKAKGA---RVVIAN----RT--YDRARE---LA---ETVGGHA---LSLADLENFNPEDGMILANTTSI--GMQPKV  457 (616)
Q Consensus       398 ~~L~~~G~---~V~v~n----Rt--~~ka~~---la---~~~~~~~---~~~~~l~~~~~~~~divInat~~--gm~p~~  457 (616)
                      +.|.+.|+   +|+|+|    |+  ..++++   +.   +.+....   ....++.+ ...++|++||+||.  ||.+. 
T Consensus       203 ~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e-~l~~aDVlInaT~~~~G~~~~-  280 (439)
T 2dvm_A          203 RILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQE-ALKDADVLISFTRPGPGVIKP-  280 (439)
T ss_dssp             HHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHH-HHTTCSEEEECSCCCSSSSCH-
T ss_pred             HHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHH-HhccCCEEEEcCCCccCCCCh-
Confidence            99999998   799999    98  333322   21   1221110   01222322 23458999999998  87642 


Q ss_pred             CCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE-ccHHHHHHHHHHHHHHHcC
Q 007151          458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV-SGLEMFIGQAYEQYERFTG  516 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i-~Gl~MLv~Qa~~qf~lwtG  516 (616)
                        .++  ..+.+..+|||+ |+|.+|+++++|++.|+.++ +|++|+++|+..+| .|.|
T Consensus       281 --e~v--~~m~~~~iVfDL-ynP~~t~~~~~A~~~G~~ivatG~~ml~~Q~nn~~-~FPG  334 (439)
T 2dvm_A          281 --QWI--EKMNEDAIVFPL-ANPVPEILPEEAKKAGARIVATGRSDYPNQINNLL-GFPG  334 (439)
T ss_dssp             --HHH--TTSCTTCEEEEC-CSSSCSSCHHHHHHHTCSEECBSCSSSSSBCCGGG-THHH
T ss_pred             --HHH--HhcCCCCEEEEC-CCCCCcchHHHHHHcCCeEEcCCCchhHHHHHHHh-cccC
Confidence              111  235667899999 99999999999999999998 99999999998765 4444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.70  E-value=1.5e-18  Score=185.17  Aligned_cols=190  Identities=16%  Similarity=0.204  Sum_probs=143.6

Q ss_pred             CcccccCHHHHHHHHHHcCC-CeeEeccCcccHHHHHHHhccCCCCeEEE-cccchHHHHhhhccccHhHhhh----cce
Q 007151          262 PVGHSKSPILYNEAFKSVGF-NGVFVHLLVDDIAKFFQTYSSNDFAGFSC-TIPHKEAAVKCCDEVDTVAKSI----GAV  335 (616)
Q Consensus       262 Pi~hS~SP~ihn~~f~~lgl-~~~Y~~~~~~~l~~~~~~l~~~~~~G~nV-T~P~K~~v~~~lD~ls~~A~~i----GAV  335 (616)
                      .|-+++||.+||..|.+.|+ ++.|..+.++.  ++++.+++.++.|+|+ |+|||..+++++|.+++.|..+    ||+
T Consensus        69 ~i~~vksP~~~~~~~~~~g~~~~~y~~~~~~~--~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~  146 (361)
T 1pjc_A           69 MVVKVKEPLPAEYDLMQKDQLLFTYLHLAAAR--ELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGAR  146 (361)
T ss_dssp             EEECSSCCCGGGGGGCCTTCEEEECCCGGGCH--HHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHH
T ss_pred             eEEEECCCCHHHHHhhcCCCEEEEEeccccCH--HHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHH
Confidence            34478899999999999997 88999988752  4566677779999998 9999999999999999999999    999


Q ss_pred             eEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          336 NCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       336 NTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      ||+...  +|+  |+..      .    .+           ..+++++|+|+|+||+|+++++.+...|++|++++|+.+
T Consensus       147 nt~~~~--~g~--G~~l------~----~l-----------~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~  201 (361)
T 1pjc_A          147 FLERQQ--GGR--GVLL------G----GV-----------PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVE  201 (361)
T ss_dssp             HTSGGG--TSC--CCCT------T----CB-----------TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             HHhhcc--CCC--ceec------c----CC-----------CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence            999765  554  3321      0    11           124568999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCcc--c--chhcccccCCCCccEEEEcCCCCCCCCCCCCccc---cccccCccEEEEEeeCCc
Q 007151          416 RARELAETVGGHA--L--SLADLENFNPEDGMILANTTSIGMQPKVDETPIP---KHALGHYALVFDAVYTPK  481 (616)
Q Consensus       416 ka~~la~~~~~~~--~--~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~---~~~l~~~~~v~Di~Y~P~  481 (616)
                      +++.+.+.++...  .  +.+++.+ ...++|+||||++.++.+.  ...+.   ...++++.+++|+.|.|.
T Consensus       202 r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~~~~--~~li~~~~~~~~~~g~~ivdv~~~~g  271 (361)
T 1pjc_A          202 RLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGRRA--PILVPASLVEQMRTGSVIVDVAVDQG  271 (361)
T ss_dssp             HHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTSSC--CCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             HHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEECCCcCCCCC--CeecCHHHHhhCCCCCEEEEEecCCC
Confidence            9988877654321  1  1122222 2235899999998765321  11112   134677889999999764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.39  E-value=1.3e-13  Score=149.07  Aligned_cols=153  Identities=24%  Similarity=0.303  Sum_probs=116.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++.|++++|+|+|++|++++..|...|+ +|+++||+.+++++++++++...++++++.+ ...++|+||++||.++...
T Consensus       164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~-~l~~aDvVi~at~~~~~~~  242 (404)
T 1gpj_A          164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD-HLARSDVVVSATAAPHPVI  242 (404)
T ss_dssp             CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH-HHHTCSEEEECCSSSSCCB
T ss_pred             cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHH-HhcCCCEEEEccCCCCcee
Confidence            3578999999999999999999999999 9999999999999999999876555554443 2346899999998764321


Q ss_pred             CCCCccccccc----cCccEEEEEeeCCcc-c------------------HHHHHHHHcCCeEEccHHHHHHHHHHHHHH
Q 007151          457 VDETPIPKHAL----GHYALVFDAVYTPKI-T------------------RLLREAEESGATIVSGLEMFIGQAYEQYER  513 (616)
Q Consensus       457 ~~~~pi~~~~l----~~~~~v~Di~Y~P~~-T------------------~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~l  513 (616)
                       +...+....+    .+..+++|+.+ |++ +                  .+.+++++.|+...+|++|+++|++.+|+.
T Consensus       243 -~~~~l~~~~lk~r~~~~~v~vdia~-P~~i~~~l~~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~  320 (404)
T 1gpj_A          243 -HVDDVREALRKRDRRSPILIIDIAN-PRDVEEGVENIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEEELSTVEE  320 (404)
T ss_dssp             -CHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTTGGGSTTEEEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHHHhccCCCCEEEEEccC-CCCCCccccccCCeEEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1111211012    24578999987 664 3                  456667777888999999999999999999


Q ss_pred             HcCCC-CCCchHHHHHHHHHH
Q 007151          514 FTGLP-GKMNAPHLYKFFVLL  533 (616)
Q Consensus       514 wtG~~-~p~~~~~l~~~l~~i  533 (616)
                      |++.. +...+..+++..+.|
T Consensus       321 w~~~~~~~~~I~~lr~~~~~~  341 (404)
T 1gpj_A          321 ELEKLKERRLVADVAKSLHEI  341 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccHHHHHHHHHHHHHH
Confidence            99874 334456788888877

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.39  E-value=1e-14  Score=160.41  Aligned_cols=140  Identities=21%  Similarity=0.318  Sum_probs=107.5

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccccCCCCccEEEEcC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTT  449 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~--~~~~---~l~~~~~~~~divInat  449 (616)
                      +.++++++++|+|+|++|++++.+|.+. |++|++++|+.++++++++..+...  +++.   ++.+ ...++|+|||++
T Consensus        18 ~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~-~l~~~DvVIn~t   96 (467)
T 2axq_A           18 EGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDK-VLADNDVVISLI   96 (467)
T ss_dssp             -----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHH-HHHTSSEEEECS
T ss_pred             ccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHH-HHcCCCEEEECC
Confidence            4567889999999999999999999998 5699999999999999986633221  2322   2322 234689999999


Q ss_pred             CCCCCCCCCCCccccccccCccEEEEEee-CCcccHHHHHHHHcCCeEEccHHH-----------HHHHH------HHHH
Q 007151          450 SIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATIVSGLEM-----------FIGQA------YEQY  511 (616)
Q Consensus       450 ~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G~~~i~Gl~M-----------Lv~Qa------~~qf  511 (616)
                      |.++.+     ++...++..+..++|++| .|..|.++++|+++|+.+++|+.|           +++|+      +.+|
T Consensus        97 p~~~~~-----~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~~~~g~~~~s~  171 (467)
T 2axq_A           97 PYTFHP-----NVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKLKSF  171 (467)
T ss_dssp             CGGGHH-----HHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             chhhhH-----HHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHHHhccCcceEE
Confidence            987643     244455667778899999 777899999999999999999999           99998      6688


Q ss_pred             HHHcCCCCCC
Q 007151          512 ERFTGLPGKM  521 (616)
Q Consensus       512 ~lwtG~~~p~  521 (616)
                      ++|+|..+|.
T Consensus       172 ~~wtG~~p~~  181 (467)
T 2axq_A          172 LSYCGGLPAP  181 (467)
T ss_dssp             EEEEEEEECG
T ss_pred             EEEecccCCc
Confidence            9999985543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=99.34  E-value=5.8e-12  Score=128.69  Aligned_cols=219  Identities=16%  Similarity=0.181  Sum_probs=154.3

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHhc-cCCCCeEEEcccchH-----HHHhhhc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTYS-SNDFAGFSCTIPHKE-----AAVKCCD  323 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l~-~~~~~G~nVT~P~K~-----~v~~~lD  323 (616)
                      ..-++| +|-+++.- ..-.++++++|++..+..++-    +++.+.++.++ ++++.|+.|.+|++.     .++..+|
T Consensus        39 avilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~  117 (286)
T 4a5o_A           39 AVILVGTDPASQVYV-AHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIH  117 (286)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSC
T ss_pred             EEEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCC
Confidence            345667 66666543 344567899999999988853    36777777774 678999999999987     6677665


Q ss_pred             cccHhHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHH
Q 007151          324 EVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKA  402 (616)
Q Consensus       324 ~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~~  402 (616)
                      - +..+.-+..+|+-...  .|.-...+++..|++..|++.           +.+++||+++|+|+|+ +|+.++..|..
T Consensus       118 p-~KDVDG~~~~N~g~l~--~g~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVvGrs~iVG~plA~lL~~  183 (286)
T 4a5o_A          118 P-DKDVDGFHPYNIGRLA--QRMPLLRPCTPKGIMTLLAST-----------GADLYGMDAVVVGASNIVGRPMALELLL  183 (286)
T ss_dssp             G-GGCTTCCSHHHHHHHH--TTCCSSCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECTTSTTHHHHHHHHHH
T ss_pred             c-ccccccCChhhhHHHh--cCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence            4 5666777788864322  333456899999999998763           2578999999999988 89999999999


Q ss_pred             CCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCc-
Q 007151          403 KGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK-  481 (616)
Q Consensus       403 ~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~-  481 (616)
                      .|++|++++|....   +.              + ...++|+||+++|.   |.    .++.++++++.+|+|+.++|. 
T Consensus       184 ~gAtVtv~hs~T~~---L~--------------~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDvgi~~~~  238 (286)
T 4a5o_A          184 GGCTVTVTHRFTRD---LA--------------D-HVSRADLVVVAAGK---PG----LVKGEWIKEGAIVIDVGINRQA  238 (286)
T ss_dssp             TTCEEEEECTTCSC---HH--------------H-HHHTCSEEEECCCC---TT----CBCGGGSCTTCEEEECCSCSSC
T ss_pred             CCCeEEEEeCCCcC---HH--------------H-HhccCCEEEECCCC---CC----CCCHHHcCCCeEEEEecccccc
Confidence            99999999873221   11              1 12347999999984   22    367788999999999999873 


Q ss_pred             ------ccHHHHHHHH-cCCeE-E-ccH-----HHHHHHHHHHHHHH
Q 007151          482 ------ITRLLREAEE-SGATI-V-SGL-----EMFIGQAYEQYERF  514 (616)
Q Consensus       482 ------~T~ll~~A~~-~G~~~-i-~Gl-----~MLv~Qa~~qf~lw  514 (616)
                            +..|- .+++ .++.+ + .|.     .||+.+-+.+++.|
T Consensus       239 ~gkl~GDVdf~-~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~  284 (286)
T 4a5o_A          239 DGRLVGDVEYE-VAAQRASWITPVPGGVGPMTRACLLENTLHAAEHL  284 (286)
T ss_dssp             CCCSSCSBCHH-HHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCcccCccHH-HHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence                  34443 3443 33221 2 233     46666666665554

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=99.33  E-value=2.3e-12  Score=131.76  Aligned_cols=186  Identities=16%  Similarity=0.165  Sum_probs=141.3

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHhc-cCCCCeEEEcccch-----HHHHhhhc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTYS-SNDFAGFSCTIPHK-----EAAVKCCD  323 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l~-~~~~~G~nVT~P~K-----~~v~~~lD  323 (616)
                      ..-++| +|-+++-- ..-.++++++|++..+..++-    +++.+.++.++ ++++.|+.|.+|+.     +.++..+|
T Consensus        38 avilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~  116 (285)
T 3l07_A           38 VAIIVGNDPASKTYV-ASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIK  116 (285)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSC
T ss_pred             EEEEECCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCC
Confidence            344567 55655443 344567899999999988853    36777777774 67899999999997     77777776


Q ss_pred             cccHhHhhhcceeEEEEeccCCe-EEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHH
Q 007151          324 EVDTVAKSIGAVNCIIRRQSDGK-LFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  401 (616)
Q Consensus       324 ~ls~~A~~iGAVNTIv~~~~dg~-l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~  401 (616)
                      - +..+.-+..+|+-...  .|. -...+++..|++..|++.           +.+++||+++|+|+|+ +|+.++..|.
T Consensus       117 p-~KDVDG~~~~N~G~l~--~g~~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVIG~s~iVG~p~A~lL~  182 (285)
T 3l07_A          117 P-EKDVDGFHPTNVGRLQ--LRDKKCLESCTPKGIMTMLREY-----------GIKTEGAYAVVVGASNVVGKPVSQLLL  182 (285)
T ss_dssp             G-GGBTTCCSHHHHHHHH--HTCTTCCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred             c-ccccccCChhheeehh--cCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchhHHHHHHHHH
Confidence            5 6677778888876432  233 446889999999998763           2578999999999998 7999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      ..|++|++++|+...   +.              + ...++|+||+++|.   |.    .+..++++++.+|+|+.++|
T Consensus       183 ~~gAtVtv~hs~t~~---L~--------------~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          183 NAKATVTTCHRFTTD---LK--------------S-HTTKADILIVAVGK---PN----FITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HTTCEEEEECTTCSS---HH--------------H-HHTTCSEEEECCCC---TT----CBCGGGSCTTCEEEECCCEE
T ss_pred             HCCCeEEEEeCCchh---HH--------------H-hcccCCEEEECCCC---CC----CCCHHHcCCCcEEEEecccC
Confidence            999999999985221   11              1 12458999999984   22    36678899999999999987

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=99.29  E-value=1.5e-11  Score=126.65  Aligned_cols=225  Identities=19%  Similarity=0.187  Sum_probs=158.0

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHhc-cCCCCeEEEcccch-----HHHHhhhc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTYS-SNDFAGFSCTIPHK-----EAAVKCCD  323 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l~-~~~~~G~nVT~P~K-----~~v~~~lD  323 (616)
                      ..-++| +|.+++.- ..-.++++++|++..+..++-    +++.+.++.++ ++++.|+.|.+|+.     +.++..+|
T Consensus        41 avilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~  119 (300)
T 4a26_A           41 ASIIVGQRMDSKKYV-QLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIH  119 (300)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSC
T ss_pred             EEEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCC
Confidence            345667 56666544 344567899999999888843    36777777774 67899999999998     67777776


Q ss_pred             cccHhHhhhcceeEEEEeccCC-eEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHH
Q 007151          324 EVDTVAKSIGAVNCIIRRQSDG-KLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  401 (616)
Q Consensus       324 ~ls~~A~~iGAVNTIv~~~~dg-~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~  401 (616)
                      - +..+.-+..+|+-.... ++ .-.-.+++..|++..|++.           +.+++||+++|+|+|+ +|+.++..|.
T Consensus       120 p-~KDVDG~~~~N~G~l~~-g~~~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVIG~s~iVG~p~A~lL~  186 (300)
T 4a26_A          120 P-HKDADALLPVNVGLLHY-KGREPPFTPCTAKGVIVLLKRC-----------GIEMAGKRAVVLGRSNIVGAPVAALLM  186 (300)
T ss_dssp             G-GGCTTCCSHHHHHHHHC-TTCCCSCCCHHHHHHHHHHHHH-----------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred             c-ccccccCCcceEEEeec-CCCcCCCCCCCHHHHHHHHHHc-----------CCCCCCCEEEEECCCchHHHHHHHHHH
Confidence            5 56677777888654321 11 1112788999999998763           2578999999999998 7999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCc
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  481 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~  481 (616)
                      ..|++|++++|.....+ +.+               ...++|+||+++|.   |.    .+..++++++.+|+|+.+++.
T Consensus       187 ~~gAtVtv~~~~T~~l~-l~~---------------~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDvgi~~~  243 (300)
T 4a26_A          187 KENATVTIVHSGTSTED-MID---------------YLRTADIVIAAMGQ---PG----YVKGEWIKEGAAVVDVGTTPV  243 (300)
T ss_dssp             HTTCEEEEECTTSCHHH-HHH---------------HHHTCSEEEECSCC---TT----CBCGGGSCTTCEEEECCCEEE
T ss_pred             HCCCeEEEEeCCCCCch-hhh---------------hhccCCEEEECCCC---CC----CCcHHhcCCCcEEEEEeccCC
Confidence            99999999998322211 001               12347999999995   22    366778999999999999753


Q ss_pred             -------------ccHHHHHHHHcCCeEEc---c-----HHHHHHHHHHHHHHHcCC
Q 007151          482 -------------ITRLLREAEESGATIVS---G-----LEMFIGQAYEQYERFTGL  517 (616)
Q Consensus       482 -------------~T~ll~~A~~~G~~~i~---G-----l~MLv~Qa~~qf~lwtG~  517 (616)
                                   +..| +.+++.-..+.+   |     ..||+.+-+.+++.|.+.
T Consensus       244 ~~~~~~~g~kl~GDVdf-~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~  299 (300)
T 4a26_A          244 PDPSRKDGYRLVGDVCF-EEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALGV  299 (300)
T ss_dssp             SCSCSTTSCEEECSBCH-HHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCCcccCCceeecCccH-HHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence                         2234 344444333332   3     457888888777777653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=99.27  E-value=8.5e-12  Score=127.52  Aligned_cols=186  Identities=15%  Similarity=0.189  Sum_probs=138.8

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHhc-cCCCCeEEEcccch-----HHHHhhhc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTYS-SNDFAGFSCTIPHK-----EAAVKCCD  323 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l~-~~~~~G~nVT~P~K-----~~v~~~lD  323 (616)
                      ..-++| +|-+++.- ..-.++++++|++..+..++-    +++.+.++.++ ++++.|+.|.+|++     ..++..+|
T Consensus        37 avilvg~dpaS~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~  115 (285)
T 3p2o_A           37 AVILVGDNPASQTYV-KSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESII  115 (285)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSC
T ss_pred             EEEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCC
Confidence            345667 56655544 344567899999999988873    36777777774 67899999999998     56777665


Q ss_pred             cccHhHhhhcceeEEEEeccCCeEEE-EecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHH
Q 007151          324 EVDTVAKSIGAVNCIIRRQSDGKLFG-YNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAK  401 (616)
Q Consensus       324 ~ls~~A~~iGAVNTIv~~~~dg~l~G-~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~  401 (616)
                      - +..+.-+..+|+-...  .|...| ++++..|++..|++.           +.+++||+++|+|+|+ +|+.++..|.
T Consensus       116 p-~KDVDg~~~~N~g~l~--~g~~~g~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvVvGrs~iVG~p~A~lL~  181 (285)
T 3p2o_A          116 S-SKDVDGFHPINVGYLN--LGLESGFLPCTPLGVMKLLKAY-----------EIDLEGKDAVIIGASNIVGRPMATMLL  181 (285)
T ss_dssp             G-GGCTTCCSHHHHHHHH--TTCCSSCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHH
T ss_pred             c-ccccccCCHhhhhhhh--cCCCCCCCCCCHHHHHHHHHHh-----------CCCCCCCEEEEECCCchHHHHHHHHHH
Confidence            4 5556667777764322  233333 789999999998763           2578999999999988 7999999999


Q ss_pred             HCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCC
Q 007151          402 AKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       402 ~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      ..|++|++++|+....                 .+ ...++|+||+++|.   |.    .+..++++++.+|+|+.++|
T Consensus       182 ~~gAtVtv~h~~t~~L-----------------~~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          182 NAGATVSVCHIKTKDL-----------------SL-YTRQADLIIVAAGC---VN----LLRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HTTCEEEEECTTCSCH-----------------HH-HHTTCSEEEECSSC---TT----CBCGGGSCTTEEEEECCCEE
T ss_pred             HCCCeEEEEeCCchhH-----------------HH-HhhcCCEEEECCCC---CC----cCCHHHcCCCeEEEEeccCc
Confidence            9999999999853211                 11 12458999999984   22    36678899999999999987

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=99.16  E-value=1.5e-10  Score=119.91  Aligned_cols=132  Identities=21%  Similarity=0.249  Sum_probs=104.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.+++++|+|+|++|++++..|...|++|++++|+.++.+.+.+ ++....+..++.+ ...++|+||+++|.++...
T Consensus       153 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~~~~~~~l~~-~l~~aDvVi~~~p~~~i~~  230 (300)
T 2rir_A          153 YTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MGLVPFHTDELKE-HVKDIDICINTIPSMILNQ  230 (300)
T ss_dssp             SCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCEEEEGGGHHH-HSTTCSEEEECCSSCCBCH
T ss_pred             CCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCeEEchhhHHH-HhhCCCEEEECCChhhhCH
Confidence            4678999999999999999999999999999999999988776544 4443333334443 3456899999999865321


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE--ccHHHHHHHHHHHHHHHcC
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFIGQAYEQYERFTG  516 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~Gl~MLv~Qa~~qf~lwtG  516 (616)
                         ..+  ..++++.+++|+.+.|..|.+ +.+++.|+.++  +|+.+.+.|+...+.+|..
T Consensus       231 ---~~~--~~mk~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~  286 (300)
T 2rir_A          231 ---TVL--SSMTPKTLILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIVAPKTAGQILANV  286 (300)
T ss_dssp             ---HHH--TTSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHHCHHHHHHHHHHH
T ss_pred             ---HHH--HhCCCCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcHHHHHHHHHHHHH
Confidence               111  346778899999999998887 88889999876  9999999999999999853

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=99.13  E-value=2.3e-12  Score=141.13  Aligned_cols=134  Identities=18%  Similarity=0.277  Sum_probs=101.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cch---hcccccCCCCccEEEEcCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSL---ADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~---~~l~~~~~~~~divInat~~gm~  454 (616)
                      +++++|+|+|++|++++.+|++.|++|++++|+.++++++++.++. ..  .++   +++.+ ...+.|+|||++|.++.
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~-~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA-EVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHH-HHTTSSEEEECCC--CH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHH-HHcCCcEEEECCccccc
Confidence            6789999999999999999999999999999999999988776542 11  132   22323 23468999999998764


Q ss_pred             CCCCCCccccccccCccEEEEEe-eCCcccHHHHHHHHcCCeEEccHHH-----------HHHHH------HHHHHHHcC
Q 007151          455 PKVDETPIPKHALGHYALVFDAV-YTPKITRLLREAEESGATIVSGLEM-----------FIGQA------YEQYERFTG  516 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~-Y~P~~T~ll~~A~~~G~~~i~Gl~M-----------Lv~Qa------~~qf~lwtG  516 (616)
                      +.     +....+..+..++|.+ |.|..+.++++|+++|+.+++|..|           +++|+      +.+|++|+|
T Consensus        82 ~~-----i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~~~~gg~i~~~~~~~G  156 (450)
T 1ff9_A           82 AT-----VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCG  156 (450)
T ss_dssp             HH-----HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred             hH-----HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHhcccCCeeeEEEEEEc
Confidence            31     3344555555566655 4777899999999999999999999           89998      777889998


Q ss_pred             CCCC
Q 007151          517 LPGK  520 (616)
Q Consensus       517 ~~~p  520 (616)
                      ..+|
T Consensus       157 ~~p~  160 (450)
T 1ff9_A          157 GLPA  160 (450)
T ss_dssp             EEEC
T ss_pred             ccCc
Confidence            7443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.98  E-value=2.2e-09  Score=110.87  Aligned_cols=120  Identities=23%  Similarity=0.287  Sum_probs=94.4

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.+++++|+|+|++|++++..|...|++|++++|+.++.+.+. +++....+.+++.+ ...++|+|++++|.++...
T Consensus       151 ~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~~~~~l~~-~l~~aDvVi~~~p~~~i~~  228 (293)
T 3d4o_A          151 FTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGMEPFHISKAAQ-ELRDVDVCINTIPALVVTA  228 (293)
T ss_dssp             SCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSEEEEGGGHHH-HTTTCSEEEECCSSCCBCH
T ss_pred             CCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCeecChhhHHH-HhcCCCEEEECCChHHhCH
Confidence            367899999999999999999999999999999999998866554 45544433344443 3457899999999765321


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE--ccHHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV--SGLEMFI  504 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i--~Gl~MLv  504 (616)
                         ..+  ..++++.+++|+.+.|..|.+ +.+++.|+.++  +|+.+.+
T Consensus       229 ---~~l--~~mk~~~~lin~ar~~~~~~~-~~a~~~Gv~~~~~~~l~~~v  272 (293)
T 3d4o_A          229 ---NVL--AEMPSHTFVIDLASKPGGTDF-RYAEKRGIKALLVPGLPGIV  272 (293)
T ss_dssp             ---HHH--HHSCTTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred             ---HHH--HhcCCCCEEEEecCCCCCCCH-HHHHHCCCEEEECCCCCccc
Confidence               111  245778999999999999987 88899999876  9999998

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=98.97  E-value=4.6e-10  Score=117.04  Aligned_cols=139  Identities=19%  Similarity=0.153  Sum_probs=106.5

Q ss_pred             CCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHH
Q 007151          344 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAK-GA-RVVIANRTYDRARELA  421 (616)
Q Consensus       344 dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la  421 (616)
                      ++.+.|+|||+.|++.+.  .+.           ....+++.|+|+|.+|++++.+|.+. |. +|+++||+.+++++++
T Consensus       111 ~~~lt~~rT~a~~~la~~--~la-----------~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~  177 (312)
T 2i99_A          111 GNVITAKRTAAVSAIATK--FLK-----------PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFA  177 (312)
T ss_dssp             CHHHHHHHHHHHHHHHHH--HHS-----------CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHH--HhC-----------CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Confidence            456889999999999873  232           23467999999999999999999876 87 9999999999999999


Q ss_pred             HHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE-eeCCcccHHHHHHHHcCCeEEccH
Q 007151          422 ETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIVSGL  500 (616)
Q Consensus       422 ~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di-~Y~P~~T~ll~~A~~~G~~~i~Gl  500 (616)
                      +.++......+++.+ ...++|+||.+||.. .|     .+...+++++..++|+ .|.|..+.+.+.++++|..++++.
T Consensus       178 ~~~~~~~~~~~~~~e-~v~~aDiVi~atp~~-~~-----v~~~~~l~~g~~vi~~g~~~p~~~el~~~~~~~g~~~vD~~  250 (312)
T 2i99_A          178 DTVQGEVRVCSSVQE-AVAGADVIITVTLAT-EP-----ILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQ  250 (312)
T ss_dssp             HHSSSCCEECSSHHH-HHTTCSEEEECCCCS-SC-----CBCGGGSCTTCEEEECCCCSTTCCSBCHHHHHHSEEEESCH
T ss_pred             HHhhCCeEEeCCHHH-HHhcCCEEEEEeCCC-Cc-----ccCHHHcCCCcEEEeCCCCCCCceeccHHHHhcCEEEECCH
Confidence            887621111222222 234589999999852 22     2333578888999998 788888888889999999999997


Q ss_pred             HH
Q 007151          501 EM  502 (616)
Q Consensus       501 ~M  502 (616)
                      ++
T Consensus       251 ~~  252 (312)
T 2i99_A          251 EA  252 (312)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=98.93  E-value=8.5e-10  Score=115.63  Aligned_cols=135  Identities=16%  Similarity=0.091  Sum_probs=102.1

Q ss_pred             CCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHH
Q 007151          344 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELA  421 (616)
Q Consensus       344 dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la  421 (616)
                      ++.+.|+||++.|++.+..  +.           ....++++|+|+|++|++.+.+|.+ .+. +|+|+||+.+++++++
T Consensus       101 ~~~lt~~RTaa~s~laa~~--la-----------~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la  167 (322)
T 1omo_A          101 ATYTTSLRTGAAGGIAAKY--LA-----------RKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFV  167 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHH--HS-----------CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHh--cc-----------CCCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHH
Confidence            4468889999999988753  32           1246899999999999999999987 456 8999999999999999


Q ss_pred             HHHCC---cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEE-eeCCcccHHHHHHHHcCCeEE
Q 007151          422 ETVGG---HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPKITRLLREAEESGATIV  497 (616)
Q Consensus       422 ~~~~~---~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di-~Y~P~~T~ll~~A~~~G~~~i  497 (616)
                      ++++.   ... .+++++ .. ++|+||+|||.+. |     .+..++++++..++|+ .|.|..+.+-.+..+++..++
T Consensus       168 ~~~~~~~~~~~-~~~~~e-~v-~aDvVi~aTp~~~-p-----v~~~~~l~~G~~V~~ig~~~p~~~el~~~~~~~a~v~v  238 (322)
T 1omo_A          168 SYCEDRGISAS-VQPAEE-AS-RCDVLVTTTPSRK-P-----VVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVV  238 (322)
T ss_dssp             HHHHHTTCCEE-ECCHHH-HT-SSSEEEECCCCSS-C-----CBCGGGCCTTCEEEECSCCSTTCCCBCHHHHHTEEEEE
T ss_pred             HHHHhcCceEE-ECCHHH-Hh-CCCEEEEeeCCCC-c-----eecHHHcCCCeEEEECCCCCCCccccCHHHHhcCeEEE
Confidence            98752   122 344444 34 6899999999653 2     2445678889999999 899987766555656666777


Q ss_pred             ccH
Q 007151          498 SGL  500 (616)
Q Consensus       498 ~Gl  500 (616)
                      +-.
T Consensus       239 D~~  241 (322)
T 1omo_A          239 DDL  241 (322)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            754

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=98.75  E-value=5.2e-09  Score=110.89  Aligned_cols=140  Identities=14%  Similarity=0.036  Sum_probs=99.6

Q ss_pred             CCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHH
Q 007151          344 DGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELA  421 (616)
Q Consensus       344 dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la  421 (616)
                      ++.|.|+|||+.|++.+..  +.           ....+++.|+|+|++|++.+.+|.. .+. +|+|+||+.+++++++
T Consensus       105 ~~~lT~~RTaa~s~laa~~--la-----------~~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la  171 (350)
T 1x7d_A          105 LTIATALRTAATSLMAAQA--LA-----------RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLI  171 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHH--HS-----------CTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHH
T ss_pred             CCEEEeehhhHHHHHHHHH--hc-----------cccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Confidence            5678999999999999863  32           1246899999999999999988764 566 8999999999999999


Q ss_pred             HHHCC----cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEee-CCcccHHHHHHHHcCCeE
Q 007151          422 ETVGG----HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGATI  496 (616)
Q Consensus       422 ~~~~~----~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G~~~  496 (616)
                      +++..    .....+++++ ...++|+||+|||.++.    ...+..++++++..+.++-. .|....+-.+..+++..+
T Consensus       172 ~~~~~~~g~~~~~~~~~~e-av~~aDiVi~aTps~~~----~pvl~~~~l~~G~~V~~vgs~~p~~~El~~~~~~~a~v~  246 (350)
T 1x7d_A          172 ANLKEYSGLTIRRASSVAE-AVKGVDIITTVTADKAY----ATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNARVF  246 (350)
T ss_dssp             HHHTTCTTCEEEECSSHHH-HHTTCSEEEECCCCSSE----EEEECGGGCCTTCEEEECSCCBTTBEEECHHHHHTSEEE
T ss_pred             HHHHhccCceEEEeCCHHH-HHhcCCEEEEeccCCCC----CceecHHHcCCCCEEEECCCCCCCceeeCHHHHhcCcEE
Confidence            98842    1212233333 23458999999998631    11244567888888888863 454433334455667678


Q ss_pred             EccHH
Q 007151          497 VSGLE  501 (616)
Q Consensus       497 i~Gl~  501 (616)
                      ++-.+
T Consensus       247 vD~~~  251 (350)
T 1x7d_A          247 VEYEP  251 (350)
T ss_dssp             ESSHH
T ss_pred             ECCHH
Confidence            88644

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.75  E-value=7.7e-09  Score=95.00  Aligned_cols=91  Identities=20%  Similarity=0.236  Sum_probs=72.9

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++++|+|+|++|++++..|...|++|++++|+.+++++++++++......+++.+ ...++|+||++||.+. +     
T Consensus        21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~Divi~at~~~~-~-----   93 (144)
T 3oj0_A           21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDS-LIKNNDVIITATSSKT-P-----   93 (144)
T ss_dssp             CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHH-HHHTCSEEEECSCCSS-C-----
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHH-HhcCCCEEEEeCCCCC-c-----
Confidence            78999999999999999999999999999999999999999998754433444333 2345899999999752 2     


Q ss_pred             ccccccccCccEEEEEee
Q 007151          461 PIPKHALGHYALVFDAVY  478 (616)
Q Consensus       461 pi~~~~l~~~~~v~Di~Y  478 (616)
                      .+...++.++..++|+..
T Consensus        94 ~~~~~~l~~g~~vid~~~  111 (144)
T 3oj0_A           94 IVEERSLMPGKLFIDLGN  111 (144)
T ss_dssp             SBCGGGCCTTCEEEECCS
T ss_pred             EeeHHHcCCCCEEEEccC
Confidence            234467788899999975

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=98.42  E-value=9.3e-07  Score=89.87  Aligned_cols=174  Identities=13%  Similarity=0.121  Sum_probs=113.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      .-++| +|-+++.-- .-.+..++.|+ .....++-    +++.+.++.+ .++++.|+-|-.|+-..    +|+    -
T Consensus        32 vilvg~dpaS~~Yv~-~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~----id~----~  101 (276)
T 3ngx_A           32 LIQIGDNEAASIYAR-AKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKG----FDY----Y  101 (276)
T ss_dssp             EEEESCCHHHHHHHH-HHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCTT----CCH----H
T ss_pred             EEEeCCCHHHHHHHH-HHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CCH----H
Confidence            44566 566655543 33556789999 76555543    3566666666 57889999999996421    111    1


Q ss_pred             hhhcceeEEEEeccCCeEEEEe-------------cCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHH
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYN-------------TDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKA  395 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~N-------------TD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrA  395 (616)
                      +.+.+++--. + -|| ++-+|             .--.|++..|++.            . ++||+++|+|+|+ +|+.
T Consensus       102 ~v~~~I~p~K-D-VDG-~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~------------~-l~Gk~vvVvG~s~iVG~p  165 (276)
T 3ngx_A          102 EIVRNIPYYK-D-VDA-LSPYNQGLIALNREFLVPATPRAVIDIMDYY------------G-YHENTVTIVNRSPVVGRP  165 (276)
T ss_dssp             HHHTTSCGGG-B-TTC-CSHHHHHHHHTTCCSSCCHHHHHHHHHHHHH------------T-CCSCEEEEECCCTTTHHH
T ss_pred             HHHhhCCCCC-c-ccC-CCccchhhhhcCCCCCCCCcHHHHHHHHHHh------------C-cCCCEEEEEcCChHHHHH
Confidence            1122221110 0 022 21111             1136888887652            2 7899999999997 8999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|...|++|++++|+....++.                  ..++|+||+++|.   |.    .+..++++++.+|+|
T Consensus       166 lA~lL~~~gAtVtv~~~~t~~L~~~------------------~~~ADIVI~Avg~---p~----~I~~~~vk~GavVID  220 (276)
T 3ngx_A          166 LSMMLLNRNYTVSVCHSKTKDIGSM------------------TRSSKIVVVAVGR---PG----FLNREMVTPGSVVID  220 (276)
T ss_dssp             HHHHHHHTTCEEEEECTTCSCHHHH------------------HHHSSEEEECSSC---TT----CBCGGGCCTTCEEEE
T ss_pred             HHHHHHHCCCeEEEEeCCcccHHHh------------------hccCCEEEECCCC---Cc----cccHhhccCCcEEEE
Confidence            9999999999999998853222211                  2347999999985   22    366778999999999


Q ss_pred             EeeCC
Q 007151          476 AVYTP  480 (616)
Q Consensus       476 i~Y~P  480 (616)
                      +.++|
T Consensus       221 vgi~~  225 (276)
T 3ngx_A          221 VGINY  225 (276)
T ss_dssp             CCCEE
T ss_pred             eccCc
Confidence            99987

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.38  E-value=7e-07  Score=91.29  Aligned_cols=75  Identities=32%  Similarity=0.373  Sum_probs=60.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .|+||.++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    .|+.+   ++++      ..+..|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            588999999998 599999999999999999999999999999999997643    23322   1111      245789


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++.+
T Consensus       106 iLVNNAG~~  114 (273)
T 4fgs_A          106 VLFVNAGGG  114 (273)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.34  E-value=1.2e-07  Score=102.20  Aligned_cols=113  Identities=19%  Similarity=0.239  Sum_probs=81.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHCC------cc--cchh---cccccCCC--CccEE
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG---ARVVIANRTYDRARELAETVGG------HA--LSLA---DLENFNPE--DGMIL  445 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G---~~V~v~nRt~~ka~~la~~~~~------~~--~~~~---~l~~~~~~--~~div  445 (616)
                      ++++|+|||++|++++..|++.|   .+|++++|+.+++++++++++.      ..  +++.   ++.+ ...  +.|+|
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~-~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVA-LINEVKPQIV   80 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHH-HHHHHCCSEE
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHH-HHHhhCCCEE
Confidence            57999999999999999999998   3899999999999999988742      11  2322   2222 112  37999


Q ss_pred             EEcCCCCCCCCCCCCccccccccCccEEEEE-eeCCcc-c--------HHHHHHHHcCCeEEccH
Q 007151          446 ANTTSIGMQPKVDETPIPKHALGHYALVFDA-VYTPKI-T--------RLLREAEESGATIVSGL  500 (616)
Q Consensus       446 Inat~~gm~p~~~~~pi~~~~l~~~~~v~Di-~Y~P~~-T--------~ll~~A~~~G~~~i~Gl  500 (616)
                      ||++|....     .++...+++.+.-++|+ .|.|.. +        .+.+.|+++|+.++.|.
T Consensus        81 in~ag~~~~-----~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~  140 (405)
T 4ina_A           81 LNIALPYQD-----LTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS  140 (405)
T ss_dssp             EECSCGGGH-----HHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred             EECCCcccC-----hHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence            999985321     23444566667778897 455442 2        68899999999887654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=98.31  E-value=4.3e-06  Score=85.53  Aligned_cols=216  Identities=19%  Similarity=0.239  Sum_probs=133.0

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHHHhhhccccHh
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAAVKCCDEVDTV  328 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v~~~lD~ls~~  328 (616)
                      ..-++| +|.+++.-- .-.+..++.|++.....++-    +++.+.++.+ .++++.|+-|-.|+-..    +|+    
T Consensus        37 avilvG~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~----id~----  107 (288)
T 1b0a_A           37 AVVLVGSNPASQIYVA-SKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAG----IDN----  107 (288)
T ss_dssp             EEEEESCCHHHHHHHH-HHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTT----SCH----
T ss_pred             EEEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCC----CCH----
Confidence            344566 555555443 33456789999976655543    3676777777 57889999999997321    111    


Q ss_pred             HhhhcceeEEEEeccCC-------eE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHH
Q 007151          329 AKSIGAVNCIIRRQSDG-------KL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKA  395 (616)
Q Consensus       329 A~~iGAVNTIv~~~~dg-------~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrA  395 (616)
                      -+.+.+++-- ++ -||       ++ .|.    --...|++..|++.           +.+++||+|+|+|+|+ +|+.
T Consensus       108 ~~i~~~I~p~-KD-VDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~-----------~i~l~gk~vvVIG~s~iVG~p  174 (288)
T 1b0a_A          108 VKVLERIHPD-KD-VDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERY-----------NIDTFGLNAVVIGASNIVGRP  174 (288)
T ss_dssp             HHHHTTSCTT-TC-TTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHH
T ss_pred             HHHHhccCCc-cC-cccCCccchhHHhCCCCCCCCCcHHHHHHHHHHc-----------CCCCCCCEEEEECCChHHHHH
Confidence            0111111100 00 011       11 010    11245777777652           2578999999999997 6999


Q ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEE
Q 007151          396 LAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       396 ia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      ++..|...|++|++++++....++.                  ..++|+||++++.   |.    .+..++++++.+++|
T Consensus       175 ~A~lL~~~gAtVtv~hs~t~~L~~~------------------~~~ADIVI~Avg~---p~----lI~~~~vk~GavVID  229 (288)
T 1b0a_A          175 MSMELLLAGCTTTVTHRFTKNLRHH------------------VENADLLIVAVGK---PG----FIPGDWIKEGAIVID  229 (288)
T ss_dssp             HHHHHHTTTCEEEEECSSCSCHHHH------------------HHHCSEEEECSCC---TT----CBCTTTSCTTCEEEE
T ss_pred             HHHHHHHCCCeEEEEeCCchhHHHH------------------hccCCEEEECCCC---cC----cCCHHHcCCCcEEEE
Confidence            9999999999999998754222111                  2347999999984   22    366678899999999


Q ss_pred             EeeCCc-------ccHHHHHHHHcCCeE-Ec-c-----HHHHHHHHHHHHHHHcCC
Q 007151          476 AVYTPK-------ITRLLREAEESGATI-VS-G-----LEMFIGQAYEQYERFTGL  517 (616)
Q Consensus       476 i~Y~P~-------~T~ll~~A~~~G~~~-i~-G-----l~MLv~Qa~~qf~lwtG~  517 (616)
                      +..++.       +..|-...+..++.+ ++ |     ..||+.+-+.+.+.|...
T Consensus       230 Vgi~r~~~g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~~~  285 (288)
T 1b0a_A          230 VGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDP  285 (288)
T ss_dssp             CCCEECTTSCEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCCccCCCCccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHhhcc
Confidence            997652       344533333444321 22 3     367777777777766543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=98.30  E-value=1.6e-07  Score=97.74  Aligned_cols=207  Identities=14%  Similarity=0.063  Sum_probs=120.5

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCcc-cHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccHhH-
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLVD-DIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDTVA-  329 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~-~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~~A-  329 (616)
                      .-++| +|-+++-- ..-.+..++.|++.....++-+ ++.+.++.+ .++++.|+-|-.|.-..+  -..++.++|.= 
T Consensus        41 vilvg~dpas~~Yv-~~k~k~~~~~Gi~~~~~~l~~~~~l~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KD  119 (320)
T 1edz_A           41 GFLANNDPAAKMYA-TWTQKTSESMGFRYDLRVIEDKDFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKD  119 (320)
T ss_dssp             EEECCCCHHHHHHH-HHHHHHHHHHTCEEEEEECSSGGGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTB
T ss_pred             EEEECCchhHHHHH-HHHHHHHHHcCCEEEEEECCChHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccc
Confidence            34556 44444333 2335567899999877777654 488888878 588999999999974321  11122222110 


Q ss_pred             -hhhcceeEEEEeccCCeEE-E------------E-ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchh-H
Q 007151          330 -KSIGAVNCIIRRQSDGKLF-G------------Y-NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-G  393 (616)
Q Consensus       330 -~~iGAVNTIv~~~~dg~l~-G------------~-NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGa-g  393 (616)
                       .-..-.|.       |+++ |            + ---..|++..|++. .- .+..-+.+.++++++++|+|+|.+ |
T Consensus       120 VDG~~~~n~-------g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll~~~-~~-~~~~~~~g~~l~gk~vvVIG~G~iVG  190 (320)
T 1edz_A          120 VEGLNHVYY-------QNLYHNVRYLDKENRLKSILPCTPLAIVKILEFL-KI-YNNLLPEGNRLYGKKCIVINRSEIVG  190 (320)
T ss_dssp             TTCCSHHHH-------HHHHTTCCBSSSSSCSBCCCCHHHHHHHHHHHHT-TC-SCTTSCTTCTTTTCEEEEECCCTTTH
T ss_pred             cCcCChhhh-------HHHhcCCccccccccCCCcCCCcHHHHHHHHHhh-cc-cccccccCCCCCCCEEEEECCCcchH
Confidence             00000000       0000 0            0 01246777776651 00 000000134789999999999975 9


Q ss_pred             HHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccc------h--hcccccCCCCccEEEEcCCCCCCCCCCCCc-ccc
Q 007151          394 KALAYGAKAKGARVVIANRTYDRARELAETVGGHALS------L--ADLENFNPEDGMILANTTSIGMQPKVDETP-IPK  464 (616)
Q Consensus       394 rAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~------~--~~l~~~~~~~~divInat~~gm~p~~~~~p-i~~  464 (616)
                      +.++..|...|++|+++||+..+..+.++.+......      .  +++.+ ...++|+||.||+..   .    + +..
T Consensus       191 ~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e-~l~~ADIVIsAtg~p---~----~vI~~  262 (320)
T 1edz_A          191 RPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK-CSLDSDVVITGVPSE---N----YKFPT  262 (320)
T ss_dssp             HHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHH-HHHHCSEEEECCCCT---T----CCBCT
T ss_pred             HHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHH-HhccCCEEEECCCCC---c----ceeCH
Confidence            9999999999999999999833222222222221111      1  33433 345689999999852   1    3 666


Q ss_pred             ccccCccEEEEEeeCC
Q 007151          465 HALGHYALVFDAVYTP  480 (616)
Q Consensus       465 ~~l~~~~~v~Di~Y~P  480 (616)
                      ++++++.+++|+...+
T Consensus       263 e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          263 EYIKEGAVCINFACTK  278 (320)
T ss_dssp             TTSCTTEEEEECSSSC
T ss_pred             HHcCCCeEEEEcCCCc
Confidence            7888899999998653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.27  E-value=1.2e-06  Score=88.66  Aligned_cols=75  Identities=24%  Similarity=0.337  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      +|+||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .++    .|+.+   +.++      ..+
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999998 599999999999999999999999999999988773   222    23322   1111      246


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        84 ~iDiLVNNAGi~   95 (254)
T 4fn4_A           84 RIDVLCNNAGIM   95 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            789999999864

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=98.27  E-value=3.9e-06  Score=86.30  Aligned_cols=182  Identities=17%  Similarity=0.261  Sum_probs=116.4

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHH----HHhhhcc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEA----AVKCCDE  324 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~----v~~~lD~  324 (616)
                      ..-++| +|.+++.-- .-.+..++.|++.....++-    +++.+.++.+ .++++.|+-|-.|+-..    --..++.
T Consensus        39 avilvG~dpaS~~Yv~-~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~  117 (301)
T 1a4i_A           39 AILQVGNRDDSNLYIN-VKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINA  117 (301)
T ss_dssp             EEEEESCCHHHHHHHH-HHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHT
T ss_pred             EEEEeCCChhHHHHHH-HHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhc
Confidence            344667 556554442 33456788999987666543    3677777777 57899999999987321    1111222


Q ss_pred             ccHhH--hhhcceeEEEEeccCCeE-EEE------ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHH
Q 007151          325 VDTVA--KSIGAVNCIIRRQSDGKL-FGY------NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGK  394 (616)
Q Consensus       325 ls~~A--~~iGAVNTIv~~~~dg~l-~G~------NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agr  394 (616)
                      ++|.=  .-..-.|.       |++ .|.      -.-..|++..|++.           +.+++|++|+|+|+|. +|+
T Consensus       118 I~p~KDVDG~hp~N~-------G~l~~g~~~~~~~PcTp~gi~~ll~~~-----------~i~l~gk~vvVIG~s~iVG~  179 (301)
T 1a4i_A          118 IAPEKDVDGLTSINA-------GRLARGDLNDCFIPCTPKGCLELIKET-----------GVPIAGRHAVVVGRSKIVGA  179 (301)
T ss_dssp             SCGGGBTTCCSHHHH-------HHHHTTCCSSCCCCHHHHHHHHHHHTT-----------TCCCTTCEEEEECCCTTTHH
T ss_pred             cCCCCCccCCChhhH-------HHHhcCCCCCCccCchHHHHHHHHHHc-----------CCCCCCCEEEEECCCchHHH
Confidence            22110  00011111       011 011      11357777777642           2578999999999996 799


Q ss_pred             HHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEE
Q 007151          395 ALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVF  474 (616)
Q Consensus       395 Aia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~  474 (616)
                      .++..|...|++|++++++..                 ++.+ ...++|+||+|++.   |.    .+..++++++.+++
T Consensus       180 p~A~lL~~~gAtVtv~hs~t~-----------------~L~~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVI  234 (301)
T 1a4i_A          180 PMHDLLLWNNATVTTCHSKTA-----------------HLDE-EVNKGDILVVATGQ---PE----MVKGEWIKPGAIVI  234 (301)
T ss_dssp             HHHHHHHHTTCEEEEECTTCS-----------------SHHH-HHTTCSEEEECCCC---TT----CBCGGGSCTTCEEE
T ss_pred             HHHHHHHhCCCeEEEEECCcc-----------------cHHH-HhccCCEEEECCCC---cc----cCCHHHcCCCcEEE
Confidence            999999999999999986522                 1111 23458999999985   22    36677889999999


Q ss_pred             EEeeCC
Q 007151          475 DAVYTP  480 (616)
Q Consensus       475 Di~Y~P  480 (616)
                      |+..++
T Consensus       235 DVgi~~  240 (301)
T 1a4i_A          235 DCGINY  240 (301)
T ss_dssp             ECCCBC
T ss_pred             EccCCC
Confidence            999875

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.26  E-value=1.2e-06  Score=88.74  Aligned_cols=76  Identities=32%  Similarity=0.347  Sum_probs=59.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ++++||+++|+|+ +|+|++++..|++.|++|++++|+.+++++.++++.   .+.    .|+.+   ++++      ..
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4789999999998 599999999999999999999999999999887763   221    23322   1110      45


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        85 G~iDiLVNNAG~~   97 (255)
T 4g81_D           85 IHVDILINNAGIQ   97 (255)
T ss_dssp             CCCCEEEECCCCC
T ss_pred             CCCcEEEECCCCC
Confidence            6799999999875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.24  E-value=3.1e-07  Score=97.48  Aligned_cols=125  Identities=19%  Similarity=0.255  Sum_probs=87.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---cccccCCCCccEEEEcCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~---~l~~~~~~~~divInat~~gm~p~  456 (616)
                      +..||+|+|||.+|+.++..|++ ..+|++++|+.++++++.+......++..   ++.+ ...+.|+|||++|..+.  
T Consensus        15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~-~~~~~DvVi~~~p~~~~--   90 (365)
T 3abi_A           15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVE-VMKEFELVIGALPGFLG--   90 (365)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHH-HHTTCSEEEECCCGGGH--
T ss_pred             CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHH-HHhCCCEEEEecCCccc--
Confidence            34589999999999999999965 46999999999988877543221122332   3333 34568999999986432  


Q ss_pred             CCCCccccccccCccEEEEEeeCCccc-HHHHHHHHcCCeEEcc------H-HHHHHHHHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKIT-RLLREAEESGATIVSG------L-EMFIGQAYEQY  511 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T-~ll~~A~~~G~~~i~G------l-~MLv~Qa~~qf  511 (616)
                         .++...+++.+.-++|+.|.+..+ .+-+.|+++|+.++++      + .|+..+++.++
T Consensus        91 ---~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~  150 (365)
T 3abi_A           91 ---FKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL  150 (365)
T ss_dssp             ---HHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHS
T ss_pred             ---chHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhc
Confidence               235556777788899999986653 5667899999988864      3 45555555554

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.08  E-value=7e-06  Score=82.61  Aligned_cols=76  Identities=36%  Similarity=0.456  Sum_probs=54.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcc----cchhcc---ccc-CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHA----LSLADL---ENF-NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~----~~~~~l---~~~-~~~~~divI  446 (616)
                      ++|+||+++|+|+ +|+|++++..|++.|++|++++|+. ++..+..++.+.+.    .|+.+.   .+. .....|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            5789999999998 5999999999999999999999974 33333444444432    233321   111 235689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        85 NNAGi~   90 (247)
T 4hp8_A           85 NNAGII   90 (247)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.06  E-value=8e-06  Score=81.66  Aligned_cols=77  Identities=30%  Similarity=0.414  Sum_probs=60.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .++.+.   .++      .....
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999998 699999999999999999999999999999998886432    233221   110      12468


Q ss_pred             cEEEEcCCCCC
Q 007151          443 MILANTTSIGM  453 (616)
Q Consensus       443 divInat~~gm  453 (616)
                      |++||+++...
T Consensus        85 d~li~~Ag~~~   95 (261)
T 3n74_A           85 DILVNNAGIGH   95 (261)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCccCC
Confidence            99999998753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.06  E-value=1.9e-06  Score=74.95  Aligned_cols=70  Identities=19%  Similarity=0.172  Sum_probs=52.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCcc--cch---hcccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHA--LSL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~~--~~~---~~l~~~~~~~~divInat~~  451 (616)
                      .+++++|+|+|++|++++..|.+.| .+|++++|+.++.+.+. ..+...  .++   +++.+ ...++|+||+++|.
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~~~~   79 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAK-ALGGFDAVISAAPF   79 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHH-HTTTCSEEEECSCG
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHH-HHcCCCEEEECCCc
Confidence            3578999999999999999999999 69999999999988776 222221  222   22222 24568999999963

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=98.04  E-value=4.3e-05  Score=81.11  Aligned_cols=133  Identities=17%  Similarity=0.171  Sum_probs=89.6

Q ss_pred             HHHHHHHHHhhhcccCCCCCCccc-ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSS-ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA  432 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~-~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~  432 (616)
                      +.|+..+.+..+....      +. +++||+|+|+|+|.+|+.++..|.+.|++|+++||+.+++++++++++...++.+
T Consensus       151 g~GV~~~~~~~~~~~~------G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~  224 (364)
T 1leh_A          151 AYGVYRGMKAAAKEAF------GSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPN  224 (364)
T ss_dssp             HHHHHHHHHHHHHHHH------SSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGG
T ss_pred             hhHHHHHHHHHHHhhc------cccCCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChH
Confidence            3566666555443210      12 6899999999999999999999999999999999999999999999876555444


Q ss_pred             cccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCccc-HHHHHHHHcCCeEEccHH
Q 007151          433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKIT-RLLREAEESGATIVSGLE  501 (616)
Q Consensus       433 ~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T-~ll~~A~~~G~~~i~Gl~  501 (616)
                      ++-   ..++|+++.|+.-+..   +...+  ..+ ...++.+..-.|..+ ...+..+++|+.++++.-
T Consensus       225 ~ll---~~~~DIvip~a~~~~I---~~~~~--~~l-g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~Pd~~  285 (364)
T 1leh_A          225 AIY---GVTCDIFAPCALGAVL---NDFTI--PQL-KAKVIAGSADNQLKDPRHGKYLHELGIVYAPDYV  285 (364)
T ss_dssp             GTT---TCCCSEEEECSCSCCB---STTHH--HHC-CCSEECCSCSCCBSSHHHHHHHHHHTCEECCHHH
T ss_pred             HHh---ccCCcEeeccchHHHh---CHHHH--HhC-CCcEEEeCCCCCcccHHHHHHHHhCCCEEeccee
Confidence            332   2368999987532221   11111  123 335666666566544 455666788987776543

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.03  E-value=5.8e-06  Score=83.23  Aligned_cols=73  Identities=22%  Similarity=0.310  Sum_probs=55.7

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---ccchhc---cccc------CCCCccEEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---ALSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~---~~~~~~---l~~~------~~~~~divIn  447 (616)
                      +|+|||+|+ +|+|+++|..|++.|++|++++|+.+++++++++.+..   ..|+.+   +.++      ..+..|++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            489999998 59999999999999999999999999998888765421   123322   1110      2457899999


Q ss_pred             cCCCCC
Q 007151          448 TTSIGM  453 (616)
Q Consensus       448 at~~gm  453 (616)
                      +++.+.
T Consensus        82 NAG~~~   87 (247)
T 3ged_A           82 NACRGS   87 (247)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.03  E-value=7.4e-06  Score=82.19  Aligned_cols=75  Identities=24%  Similarity=0.321  Sum_probs=59.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcccc---c------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADLEN---F------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l~~---~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .|+.+.++   +      .....|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999998 699999999999999999999999999999988876432    23322111   0      234689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        85 ~lv~nAg~~   93 (255)
T 4eso_A           85 LLHINAGVS   93 (255)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.02  E-value=8.8e-06  Score=81.19  Aligned_cols=75  Identities=35%  Similarity=0.454  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +.++      .....|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            468999999998 699999999999999999999999999999988886432    23322   1111      124689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ~lv~nAg~~   91 (247)
T 3rwb_A           83 ILVNNASIV   91 (247)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.02  E-value=1.3e-05  Score=81.59  Aligned_cols=77  Identities=27%  Similarity=0.375  Sum_probs=60.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+.   .++      .....
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999998 699999999999999999999999999999988876532    233221   110      12468


Q ss_pred             cEEEEcCCCCC
Q 007151          443 MILANTTSIGM  453 (616)
Q Consensus       443 divInat~~gm  453 (616)
                      |+|||+++...
T Consensus       103 D~lv~nAg~~~  113 (277)
T 4dqx_A          103 DVLVNNAGFGT  113 (277)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCCcCC
Confidence            99999998753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.01  E-value=1.2e-05  Score=80.58  Aligned_cols=75  Identities=29%  Similarity=0.421  Sum_probs=59.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +.++      ..+..|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999998 799999999999999999999999999999998886432    23322   1110      234689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        85 ~lv~~Ag~~   93 (259)
T 4e6p_A           85 ILVNNAALF   93 (259)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.01  E-value=6.2e-06  Score=82.99  Aligned_cols=75  Identities=17%  Similarity=0.214  Sum_probs=56.2

Q ss_pred             ccCCcEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---C-cc----cchhc---cccc------
Q 007151          378 ALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRARELAETVG---G-HA----LSLAD---LENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-G--GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~-~~----~~~~~---l~~~------  437 (616)
                      +++||+++|+|| |  |+|+++|..|++.|++|++++|+.+..+++++.+.   . +.    +|+.+   +.++      
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999997 4  89999999999999999999999877777766553   2 11    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        83 ~~G~iD~lvnnAg~~   97 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFA   97 (256)
T ss_dssp             HHCCCSEEEECCCCC
T ss_pred             HhCCCCEEEeccccc
Confidence            245789999999864

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=98.01  E-value=9e-07  Score=98.94  Aligned_cols=82  Identities=17%  Similarity=0.185  Sum_probs=59.8

Q ss_pred             CCeEEEEecCHHHHHHHHHhh-------hc--ccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEE---
Q 007151          344 DGKLFGYNTDYVGAISAIEDG-------LR--GRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIA---  410 (616)
Q Consensus       344 dg~l~G~NTD~~G~~~~L~~~-------l~--~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~---  410 (616)
                      +|++.|+|||+.|++..++-.       ++  +..-.+...-..+++++|+|+|+||+|.+++..|+..|+ +|+++   
T Consensus       281 ~Gkl~g~~tD~~g~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          281 QGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             TSSSSCEEEECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             CCCCcceeecchhccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            799999999999999998611       00  000000000135778999999999999999999999999 99999   


Q ss_pred             -------ECCH---------HHHHHHHHHHC
Q 007151          411 -------NRTY---------DRARELAETVG  425 (616)
Q Consensus       411 -------nRt~---------~ka~~la~~~~  425 (616)
                             +|..         .|++.+++.+.
T Consensus       361 ~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~  391 (598)
T 3vh1_A          361 TVSYSNPVRQALYNFEDCGKPKAELAAASLK  391 (598)
T ss_dssp             BCCTTSTTTSTTCCSTTCSSBHHHHHHHHHH
T ss_pred             cccccccccccccchhhcCcHHHHHHHHHHH
Confidence                   4442         57777777654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.99  E-value=1.2e-05  Score=82.15  Aligned_cols=76  Identities=30%  Similarity=0.456  Sum_probs=59.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc--CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF--NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~--~~~~~divI  446 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+.   ..+  .....|+||
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4678999999998 799999999999999999999999999999887765432    233322   111  235689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        92 ~nAg~~   97 (291)
T 3rd5_A           92 NNAGIM   97 (291)
T ss_dssp             ECCCCC
T ss_pred             ECCcCC
Confidence            999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.98  E-value=1.4e-05  Score=79.41  Aligned_cols=76  Identities=25%  Similarity=0.373  Sum_probs=58.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc--CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF--NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~--~~~~~divI  446 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++....    .++.+   +.++  .....|++|
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4678999999998 799999999999999999999999999999988876432    23322   1111  235689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        90 ~~Ag~~   95 (249)
T 3f9i_A           90 CNAGIT   95 (249)
T ss_dssp             ECCC--
T ss_pred             ECCCCC
Confidence            999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.97  E-value=1.1e-05  Score=81.69  Aligned_cols=76  Identities=33%  Similarity=0.461  Sum_probs=60.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.+++++++++++...    .|+.+   +.++      .....
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999998 699999999999999999999999999999988886532    23322   1110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus       103 D~lvnnAg~~  112 (266)
T 3grp_A          103 DILVNNAGIT  112 (266)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=97.97  E-value=2.3e-05  Score=79.84  Aligned_cols=181  Identities=17%  Similarity=0.242  Sum_probs=113.9

Q ss_pred             EEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--HhhhccccH
Q 007151          256 FGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVDT  327 (616)
Q Consensus       256 ~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls~  327 (616)
                      .-++| +|.+++.- ..-.+..++.|++.....++-    +++.+.++.+ .++++.|+-|-.|+-..+  -..++.++|
T Consensus        37 vilvg~dpas~~Yv-~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p  115 (281)
T 2c2x_A           37 TILVGDDPGSQAYV-RGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDP  115 (281)
T ss_dssp             EEEESCCHHHHHHH-HHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCG
T ss_pred             EEEeCCChhhHHHH-HHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCc
Confidence            44566 55555443 233456789999987666653    3566677777 578999999999973211  111111111


Q ss_pred             hH--hhhcceeEEEEeccCCeE-EEE----ecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchh-HHHHHHH
Q 007151          328 VA--KSIGAVNCIIRRQSDGKL-FGY----NTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGA-GKALAYG  399 (616)
Q Consensus       328 ~A--~~iGAVNTIv~~~~dg~l-~G~----NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGa-grAia~~  399 (616)
                      .=  .-..-.|.       |++ .|.    ---..|++..|++.           +.+++||+++|+|+|.+ |+.++..
T Consensus       116 ~KDVDG~~p~n~-------g~l~~g~~~~~PcTp~gi~~ll~~~-----------~i~l~gk~vvVvG~s~iVG~p~A~l  177 (281)
T 2c2x_A          116 AKDADGLHPTNL-------GRLVLGTPAPLPCTPRGIVHLLRRY-----------DISIAGAHVVVIGRGVTVGRPLGLL  177 (281)
T ss_dssp             GGBTTSCCHHHH-------HHHHHTCCCCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred             cCCccCCChhhH-------HHHhCCCCCCCCChHHHHHHHHHHc-----------CCCCCCCEEEEECCCcHHHHHHHHH
Confidence            10  00000000       011 010    11246677766542           25789999999999985 9999999


Q ss_pred             HHHC--CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEe
Q 007151          400 AKAK--GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       400 L~~~--G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      |...  |++|++++|+...                 +.+ ...++|+||++++.   |+    .+..++++++.+++|+.
T Consensus       178 L~~~g~~atVtv~h~~t~~-----------------L~~-~~~~ADIVI~Avg~---p~----~I~~~~vk~GavVIDVg  232 (281)
T 2c2x_A          178 LTRRSENATVTLCHTGTRD-----------------LPA-LTRQADIVVAAVGV---AH----LLTADMVRPGAAVIDVG  232 (281)
T ss_dssp             HTSTTTCCEEEEECTTCSC-----------------HHH-HHTTCSEEEECSCC---TT----CBCGGGSCTTCEEEECC
T ss_pred             HhcCCCCCEEEEEECchhH-----------------HHH-HHhhCCEEEECCCC---Cc----ccCHHHcCCCcEEEEcc
Confidence            9999  7899999886421                 111 23458999999994   22    36677888999999998


Q ss_pred             eCC
Q 007151          478 YTP  480 (616)
Q Consensus       478 Y~P  480 (616)
                      .++
T Consensus       233 i~r  235 (281)
T 2c2x_A          233 VSR  235 (281)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            765

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.95  E-value=1e-05  Score=82.41  Aligned_cols=76  Identities=28%  Similarity=0.301  Sum_probs=58.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+.   .++      .....
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999998 699999999999999999999999999999998886432    233221   110      13468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus       105 D~lvnnAg~~  114 (277)
T 3gvc_A          105 DKLVANAGVV  114 (277)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.95  E-value=1.1e-05  Score=80.57  Aligned_cols=76  Identities=29%  Similarity=0.415  Sum_probs=59.2

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.++...    .|+.+   +.++      .....
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999998 699999999999999999999999999999988875421    23322   1110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        85 D~lv~nAg~~   94 (248)
T 3op4_A           85 DILVNNAGIT   94 (248)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.93  E-value=1.3e-05  Score=81.66  Aligned_cols=74  Identities=30%  Similarity=0.399  Sum_probs=58.2

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~di  444 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.++...    .|+.+.   ..+      .....|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899999998 699999999999999999999999999999988876432    233221   110      2346899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        83 lvnnAg~~   90 (281)
T 3zv4_A           83 LIPNAGIW   90 (281)
T ss_dssp             EECCCCCC
T ss_pred             EEECCCcC
Confidence            99999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.93  E-value=9.9e-06  Score=81.96  Aligned_cols=76  Identities=26%  Similarity=0.313  Sum_probs=59.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+.   .++      .....
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999998 799999999999999999999999999999888876432    233221   110      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        87 d~lv~nAg~~   96 (271)
T 3tzq_B           87 DIVDNNAAHS   96 (271)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999865

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.93  E-value=1.4e-05  Score=79.08  Aligned_cols=73  Identities=23%  Similarity=0.345  Sum_probs=56.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~div  445 (616)
                      .+|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +..+      ..+..|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            3689999998 699999999999999999999999999999988875321    23322   1110      12468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++.+
T Consensus        82 vnnAg~~   88 (235)
T 3l6e_A           82 LHCAGTG   88 (235)
T ss_dssp             EEECCCC
T ss_pred             EECCCCC
Confidence            9999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.92  E-value=1.2e-05  Score=81.55  Aligned_cols=75  Identities=28%  Similarity=0.409  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +.++      ..+..|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999998 699999999999999999999999999999998886432    23322   1111      124689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus       105 ~lVnnAg~~  113 (272)
T 4dyv_A          105 VLFNNAGTG  113 (272)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.92  E-value=1.9e-05  Score=79.77  Aligned_cols=76  Identities=25%  Similarity=0.391  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhcc---ccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLADL---ENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~l---~~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++    +...    .++.+.   ..+      .
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5688999999998 79999999999999999999999999888877665    3322    233221   110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        97 ~g~iD~lvnnAg~~  110 (267)
T 1vl8_A           97 FGKLDTVVNAAGIN  110 (267)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24689999999865

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.90  E-value=1.5e-05  Score=79.73  Aligned_cols=75  Identities=29%  Similarity=0.350  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +..+      .....|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999998 799999999999999999999999999988887764321    23322   1110      123689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        82 ~lv~nAg~~   90 (254)
T 1hdc_A           82 GLVNNAGIS   90 (254)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.89  E-value=1.7e-05  Score=79.52  Aligned_cols=75  Identities=25%  Similarity=0.383  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+   +.++      ...
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999998 7999999999999999999999999999999888743   11    23322   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        83 ~id~lv~nAg~~   94 (257)
T 3imf_A           83 RIDILINNAAGN   94 (257)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.89  E-value=1.8e-05  Score=79.59  Aligned_cols=75  Identities=25%  Similarity=0.330  Sum_probs=57.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+.   .++      ..
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999998 699999999999999999999999999999887763   221    233221   110      23


Q ss_pred             CCccEEEEcCCC
Q 007151          440 EDGMILANTTSI  451 (616)
Q Consensus       440 ~~~divInat~~  451 (616)
                      ...|++||+++.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            568999999875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.88  E-value=2.5e-05  Score=77.80  Aligned_cols=75  Identities=35%  Similarity=0.449  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.   ...    .|+.+.   ..+      ...
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999998 799999999999999999999999999888877662   221    233221   110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        84 ~id~lv~nAg~~   95 (247)
T 2jah_A           84 GLDILVNNAGIM   95 (247)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.87  E-value=1.8e-05  Score=79.26  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+   +..+      . .
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-A   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-C
Confidence            467899999998 699999999999999999999999999888887763   221    23322   1111      2 4


Q ss_pred             CccEEEEcCCCCC
Q 007151          441 DGMILANTTSIGM  453 (616)
Q Consensus       441 ~~divInat~~gm  453 (616)
                      ..|++||+++...
T Consensus        83 ~id~lv~nAg~~~   95 (252)
T 3h7a_A           83 PLEVTIFNVGANV   95 (252)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             CceEEEECCCcCC
Confidence            6899999998753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.86  E-value=2.6e-05  Score=78.37  Aligned_cols=76  Identities=17%  Similarity=0.289  Sum_probs=56.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-----CCcc----cchhc---cccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV-----GGHA----LSLAD---LENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~-----~~~~----~~~~~---l~~~------  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++     +...    .|+.+   +.++      
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999998 79999999999999999999999999888877665     2221    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      ..+..|+|||+++..
T Consensus        89 ~~g~id~lv~nAg~~  103 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIE  103 (267)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence            124689999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.86  E-value=1.3e-05  Score=81.19  Aligned_cols=76  Identities=21%  Similarity=0.187  Sum_probs=53.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHH--HHHCCcc----cchhc---cccc------CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELA--ETVGGHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la--~~~~~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++||.++|+|+ +|+|++++..|++.|++|++++|+.++.+.+.  .+.+.+.    +|+.+   +.++      ..+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4689999999998 59999999999999999999999765433322  1223221    23322   1110      246


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        83 ~iDiLVNnAGi~   94 (258)
T 4gkb_A           83 RLDGLVNNAGVN   94 (258)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.86  E-value=1.8e-05  Score=79.02  Aligned_cols=75  Identities=21%  Similarity=0.276  Sum_probs=57.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++++++++...    .|+.+.   ..+      .....|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999998 799999999999999999999999999998888775322    233221   110      124579


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        83 ~lv~~Ag~~   91 (253)
T 1hxh_A           83 VLVNNAGIL   91 (253)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.86  E-value=2.1e-05  Score=78.24  Aligned_cols=74  Identities=30%  Similarity=0.324  Sum_probs=56.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~divI  446 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...  .|+.+   +.++      .....|+||
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            56899999998 799999999999999999999999999888877654322  23322   1110      124589999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        83 n~Ag~~   88 (245)
T 1uls_A           83 HYAGIT   88 (245)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.86  E-value=2.6e-05  Score=77.52  Aligned_cols=75  Identities=28%  Similarity=0.388  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+   +.++      ..
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999998 799999999999999999999999999999887763   211    23322   1111      12


Q ss_pred             CCccEEEEcCCC
Q 007151          440 EDGMILANTTSI  451 (616)
Q Consensus       440 ~~~divInat~~  451 (616)
                      ...|+|||+++.
T Consensus        85 g~id~li~~Ag~   96 (253)
T 3qiv_A           85 GGIDYLVNNAAI   96 (253)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            468999999986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.86  E-value=2e-05  Score=79.78  Aligned_cols=74  Identities=26%  Similarity=0.445  Sum_probs=56.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~~  441 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+.   ..+      ..+.
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998 699999999999999999999999999999887763   221    233221   110      1346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        82 iD~lVnnAG~~   92 (264)
T 3tfo_A           82 IDVLVNNAGVM   92 (264)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.86  E-value=2e-05  Score=79.31  Aligned_cols=76  Identities=18%  Similarity=0.250  Sum_probs=58.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~----~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    ..    .|+.+   +.++      .
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4688999999998 6999999999999999999999999999988877632    11    23322   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        86 ~g~id~lvnnAg~~   99 (262)
T 3pk0_A           86 FGGIDVVCANAGVF   99 (262)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             hCCCCEEEECCCCC
Confidence            24689999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.86  E-value=3.7e-05  Score=76.79  Aligned_cols=76  Identities=21%  Similarity=0.306  Sum_probs=57.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c--c--cch--hc---cccc-----
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSL--AD---LENF-----  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~--~--~~~--~~---l~~~-----  437 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    .  .  .++  .+   +.++     
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            3578999999998 6999999999999999999999999998888776521    1  1  233  11   1110     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|+|||+++..
T Consensus        88 ~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             HHCSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEECCccC
Confidence             234689999999863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.85  E-value=3.1e-05  Score=77.64  Aligned_cols=75  Identities=31%  Similarity=0.495  Sum_probs=56.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~l---~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++    +...    .|+.+.   .++      ..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999998 79999999999999999999999999888877665    3221    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|+|||+++..
T Consensus        84 g~id~lv~~Ag~~   96 (263)
T 3ai3_A           84 GGADILVNNAGTG   96 (263)
T ss_dssp             SSCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.85  E-value=1.1e-05  Score=80.73  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=49.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +.++      .....|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999998 699999999999999999999999988888877765422    23322   1110      124689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        84 ~lv~nAg~~   92 (257)
T 3tpc_A           84 GLVNCAGTA   92 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.85  E-value=2.1e-05  Score=79.72  Aligned_cols=76  Identities=26%  Similarity=0.348  Sum_probs=58.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+.   .++      ..
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4688999999998 699999999999999999999999999998887763   221    233221   110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       102 g~iD~lv~nAg~~  114 (271)
T 4ibo_A          102 IDVDILVNNAGIQ  114 (271)
T ss_dssp             CCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.85  E-value=3.7e-05  Score=77.84  Aligned_cols=76  Identities=24%  Similarity=0.310  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc-----CCCCcc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF-----NPEDGM  443 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~-----~~~~~d  443 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+.   .++     .....|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4678999999998 699999999999999999999999999999999886532    233221   110     234679


Q ss_pred             EEEEc-CCCC
Q 007151          444 ILANT-TSIG  452 (616)
Q Consensus       444 ivIna-t~~g  452 (616)
                      ++||+ ++.+
T Consensus       106 ~lv~~aag~~  115 (281)
T 3ppi_A          106 YAVVAHGGFG  115 (281)
T ss_dssp             EEEECCCCCC
T ss_pred             eEEEccCccc
Confidence            99998 5544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.84  E-value=1.5e-05  Score=81.28  Aligned_cols=76  Identities=26%  Similarity=0.371  Sum_probs=54.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c--c--cchhccc---cc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSLADLE---NF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~--~--~~~~~l~---~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    .  .  .|+.+.+   ++      .
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999998 7999999999999999999999999998888776531    1  1  2332211   10      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|+|||+++..
T Consensus       109 ~g~iD~lvnnAG~~  122 (281)
T 4dry_A          109 FARLDLLVNNAGSN  122 (281)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24689999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.84  E-value=3.1e-05  Score=77.91  Aligned_cols=76  Identities=25%  Similarity=0.262  Sum_probs=57.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c-c----cchhcc---ccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-A----LSLADL---ENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~-~----~~~~~l---~~~------  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    . .    .|+.+.   ..+      
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4678999999998 6999999999999999999999999998888776531    1 1    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        84 ~~g~id~lvnnAg~~   98 (265)
T 3lf2_A           84 TLGCASILVNNAGQG   98 (265)
T ss_dssp             HHCSCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence            134689999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.83  E-value=3e-05  Score=77.46  Aligned_cols=76  Identities=24%  Similarity=0.329  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC------Ccc----cchhcc---ccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG------GHA----LSLADL---ENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~------~~~----~~~~~l---~~~------  437 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.      ...    .|+.+.   ..+      
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            467899999998 699999999999999999999999999988877652      111    233221   110      


Q ss_pred             CCCCccEEEEcCCCCC
Q 007151          438 NPEDGMILANTTSIGM  453 (616)
Q Consensus       438 ~~~~~divInat~~gm  453 (616)
                      .....|++||+++...
T Consensus        84 ~~g~iD~lvnnAg~~~   99 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFM   99 (250)
T ss_dssp             HHCCEEEEEECCCCCC
T ss_pred             hcCCCCEEEECCCcCC
Confidence            1246899999998753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.82  E-value=4.2e-05  Score=77.56  Aligned_cols=75  Identities=21%  Similarity=0.269  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~l---~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++   +...    .|+.+.   ..+      ...
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999998 79999999999999999999999999888877766   2221    233221   110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        99 ~iD~lv~~Ag~~  110 (277)
T 2rhc_B           99 PVDVLVNNAGRP  110 (277)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.82  E-value=2.9e-05  Score=78.01  Aligned_cols=75  Identities=24%  Similarity=0.324  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++....    .|+.+   +.++      ..+..|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999998 799999999999999999999999999988877764321    23322   1110      123689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        84 ~lv~~Ag~~   92 (260)
T 1nff_A           84 VLVNNAGIL   92 (260)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999865

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.82  E-value=2.1e-05  Score=79.25  Aligned_cols=75  Identities=24%  Similarity=0.268  Sum_probs=57.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +..+      .....|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence            367899999998 799999999999999999999999999988887764321    23322   1110      124579


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        83 ~lvnnAg~~   91 (263)
T 2a4k_A           83 GVAHFAGVA   91 (263)
T ss_dssp             EEEEGGGGT
T ss_pred             EEEECCCCC
Confidence            999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.82  E-value=2.9e-05  Score=78.75  Aligned_cols=75  Identities=19%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchhcc---ccc-----
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLADL---ENF-----  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~------~~----~~~~~l---~~~-----  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..      ..    .|+.+.   .++     
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4678999999998 7999999999999999999999999999988877632      11    233221   110     


Q ss_pred             -CCCCccEEEEcCCC
Q 007151          438 -NPEDGMILANTTSI  451 (616)
Q Consensus       438 -~~~~~divInat~~  451 (616)
                       .....|++||+++.
T Consensus        87 ~~~g~id~lv~nAg~  101 (281)
T 3svt_A           87 AWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence             12468999999986

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.82  E-value=2.7e-05  Score=78.05  Aligned_cols=76  Identities=28%  Similarity=0.354  Sum_probs=58.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+.   .++      ..
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999998 699999999999999999999999999988887663   221    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        88 g~id~lv~nAg~~  100 (256)
T 3gaf_A           88 GKITVLVNNAGGG  100 (256)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.81  E-value=2.8e-05  Score=77.93  Aligned_cols=75  Identities=20%  Similarity=0.291  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++....    .|+.+   +..+      ..+..|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            577899999998 799999999999999999999999999888877654211    23322   1110      123689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        89 ~lv~~Ag~~   97 (263)
T 3ak4_A           89 LLCANAGVS   97 (263)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.81  E-value=1.8e-05  Score=80.18  Aligned_cols=76  Identities=24%  Similarity=0.304  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+.   ..+      ..
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3578999999998 699999999999999999999999999888877653   211    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       104 g~iD~lvnnAg~~  116 (270)
T 3ftp_A          104 GALNVLVNNAGIT  116 (270)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.80  E-value=3.1e-05  Score=78.07  Aligned_cols=76  Identities=26%  Similarity=0.378  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhcccc---c------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLADLEN---F------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~l~~---~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++    +...    .|+.+.++   +      .
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999998 79999999999999999999999999988877665    2221    23322211   0      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        96 ~g~id~lv~nAg~~  109 (266)
T 4egf_A           96 FGGLDVLVNNAGIS  109 (266)
T ss_dssp             HTSCSEEEEECCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24689999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.80  E-value=4.7e-05  Score=76.19  Aligned_cols=76  Identities=20%  Similarity=0.167  Sum_probs=57.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.   ...    .|+.+.   .++      ..
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999998 799999999999999999999999998888777652   221    233221   110      12


Q ss_pred             -CCccEEEEcCCCC
Q 007151          440 -EDGMILANTTSIG  452 (616)
Q Consensus       440 -~~~divInat~~g  452 (616)
                       ...|+|||+++..
T Consensus        85 ~g~id~lv~~Ag~~   98 (260)
T 2ae2_A           85 HGKLNILVNNAGIV   98 (260)
T ss_dssp             TTCCCEEEECCCCC
T ss_pred             CCCCCEEEECCCCC
Confidence             5689999999865

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.80  E-value=6.2e-05  Score=73.90  Aligned_cols=73  Identities=25%  Similarity=0.397  Sum_probs=55.0

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~---l~~~------~~~~~  442 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.    ...    .|+.+   +.++      ..+..
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            689999998 799999999999999999999999999888876653    221    23322   2111      12368


Q ss_pred             cEEEEcCCCCC
Q 007151          443 MILANTTSIGM  453 (616)
Q Consensus       443 divInat~~gm  453 (616)
                      |++||+++.+.
T Consensus        82 d~li~~Ag~~~   92 (235)
T 3l77_A           82 DVVVANAGLGY   92 (235)
T ss_dssp             SEEEECCCCCC
T ss_pred             CEEEECCcccc
Confidence            99999998753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.80  E-value=3.5e-05  Score=78.14  Aligned_cols=75  Identities=23%  Similarity=0.217  Sum_probs=56.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~l---~~~------~~  439 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++    +...    .|+.+.   .++      ..
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            478999999998 69999999999999999999999999888877665    2221    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       104 g~id~lv~nAg~~  116 (277)
T 4fc7_A          104 GRIDILINCAAGN  116 (277)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCcCC
Confidence            4689999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.80  E-value=1.8e-05  Score=80.45  Aligned_cols=76  Identities=26%  Similarity=0.356  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+   +.++      ..
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999998 799999999999999999999999998888877763   111    23322   1111      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       108 g~iD~lvnnAg~~  120 (276)
T 3r1i_A          108 GGIDIAVCNAGIV  120 (276)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.79  E-value=5.1e-05  Score=75.10  Aligned_cols=74  Identities=31%  Similarity=0.381  Sum_probs=56.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~  441 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +.++      ....
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            56899999998 799999999999999999999999999888877662   221    23322   1110      2356


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        83 id~li~~Ag~~   93 (247)
T 3lyl_A           83 IDILVNNAGIT   93 (247)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.79  E-value=6e-05  Score=74.23  Aligned_cols=75  Identities=31%  Similarity=0.414  Sum_probs=57.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc--CCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~--~~~~~divIna  448 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. ..  .++.+   +.++  .....|+|||+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            467899999998 7999999999999999999999999998888776532 21  23322   2111  23468999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        84 Ag~~   87 (244)
T 3d3w_A           84 AAVA   87 (244)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            9864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.79  E-value=3.6e-05  Score=78.48  Aligned_cols=75  Identities=25%  Similarity=0.314  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+.   ..+      ..+
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567899999998 6999999999999999999999999999999888742   11    233221   110      134


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus       105 ~iD~lVnnAg~~  116 (283)
T 3v8b_A          105 HLDIVVANAGIN  116 (283)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.79  E-value=2.2e-05  Score=79.94  Aligned_cols=75  Identities=29%  Similarity=0.348  Sum_probs=58.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+.   ..+      ..+
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999998 6999999999999999999999999999999888742   11    233221   110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        85 ~iD~lvnnAg~~   96 (280)
T 3tox_A           85 GLDTAFNNAGAL   96 (280)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.79  E-value=7.2e-05  Score=75.57  Aligned_cols=76  Identities=24%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+   +.++      ..
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999998 799999999999999999999999998888776652   221    23322   1110      12


Q ss_pred             -CCccEEEEcCCCC
Q 007151          440 -EDGMILANTTSIG  452 (616)
Q Consensus       440 -~~~divInat~~g  452 (616)
                       ...|+|||+++..
T Consensus        97 ~g~id~lv~nAg~~  110 (273)
T 1ae1_A           97 DGKLNILVNNAGVV  110 (273)
T ss_dssp             TSCCCEEEECCCCC
T ss_pred             CCCCcEEEECCCCC
Confidence             5689999999865

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.79  E-value=3.7e-05  Score=77.41  Aligned_cols=76  Identities=29%  Similarity=0.330  Sum_probs=57.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhcc---ccc--CCCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADL---ENF--NPED  441 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~l---~~~--~~~~  441 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..     ..    .++.+.   .++  ....
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            4578999999998 7999999999999999999999999998888776531     11    122221   111  2456


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        86 id~lv~nAg~~   96 (267)
T 3t4x_A           86 VDILINNLGIF   96 (267)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.78  E-value=4.3e-05  Score=77.63  Aligned_cols=77  Identities=25%  Similarity=0.345  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC----------------HHHHHHHHHHHCC---cc----cchh
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT----------------YDRARELAETVGG---HA----LSLA  432 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt----------------~~ka~~la~~~~~---~~----~~~~  432 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+                .++++++++.+..   ..    .|+.
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            4578999999998 699999999999999999999887                7888888776532   11    2332


Q ss_pred             c---cccc------CCCCccEEEEcCCCCC
Q 007151          433 D---LENF------NPEDGMILANTTSIGM  453 (616)
Q Consensus       433 ~---l~~~------~~~~~divInat~~gm  453 (616)
                      +   +.++      .....|+|||+++...
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  116 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGN  116 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence            2   1111      1246899999998753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.78  E-value=4.4e-05  Score=76.58  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=56.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc---cc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~---~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.   ...    .|+.+.+   .+      ...
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467899999998 799999999999999999999999999888877763   111    2332211   10      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        84 ~id~lv~nAg~~   95 (262)
T 1zem_A           84 KIDFLFNNAGYQ   95 (262)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.78  E-value=5.5e-05  Score=74.88  Aligned_cols=76  Identities=25%  Similarity=0.349  Sum_probs=58.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-----cchhc---cccc-----CCCCc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----LSLAD---LENF-----NPEDG  442 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-----~~~~~---l~~~-----~~~~~  442 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++...     .++.+   +..+     .....
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            3578899999998 799999999999999999999999999888887764322     23322   1110     01468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        87 d~li~~Ag~~   96 (254)
T 2wsb_A           87 SILVNSAGIA   96 (254)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECCccC
Confidence            9999999864

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.77  E-value=3e-05  Score=79.71  Aligned_cols=75  Identities=21%  Similarity=0.270  Sum_probs=57.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+.   .++      ...
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            478999999998 7999999999999999999999999999998877631   11    233221   111      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       108 ~id~lvnnAg~~  119 (301)
T 3tjr_A          108 GVDVVFSNAGIV  119 (301)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.77  E-value=3.5e-05  Score=78.29  Aligned_cols=75  Identities=17%  Similarity=0.122  Sum_probs=55.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      .+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++++++..   ..    .|+.+.   .++      ..+
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            457899999998 7999999999999999999999999999998887732   11    233221   110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       101 ~id~lv~nAg~~  112 (279)
T 3sju_A          101 PIGILVNSAGRN  112 (279)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            689999999864

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.77  E-value=5.3e-05  Score=76.88  Aligned_cols=76  Identities=26%  Similarity=0.383  Sum_probs=58.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~  440 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..  ..    .|+.+   +.++      ...
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3578999999998 7999999999999999999999999998888877642  11    23322   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       105 ~iD~lvnnAg~~  116 (276)
T 2b4q_A          105 RLDILVNNAGTS  116 (276)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=97.76  E-value=2.7e-05  Score=81.07  Aligned_cols=112  Identities=21%  Similarity=0.174  Sum_probs=75.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHH----CCcccchhcccccCCCCccEEEEcCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETV----GGHALSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~----~~~~~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ..++++|+|+|++|+..+.+|.. .+. +|+|+||+  +++++++++    +...... ++++ ...++|+||+|||.. 
T Consensus       120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~e-av~~aDIVi~aT~s~-  194 (313)
T 3hdj_A          120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APAD-IAAQADIVVTATRST-  194 (313)
T ss_dssp             TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHH-HHHHCSEEEECCCCS-
T ss_pred             CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHH-HHhhCCEEEEccCCC-
Confidence            45899999999999999999987 456 89999999  888888764    3322111 3332 234589999999974 


Q ss_pred             CCCCCCCccccccccCccEEEEEee-CCcccHHHHHHHHcC-CeEEccHH
Q 007151          454 QPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESG-ATIVSGLE  501 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G-~~~i~Gl~  501 (616)
                      .|.     +..++++++..+.|+-. .|....+-.+..+++ ..+++-.+
T Consensus       195 ~pv-----l~~~~l~~G~~V~~vGs~~p~~~El~~~~~~~a~~v~vD~~~  239 (313)
T 3hdj_A          195 TPL-----FAGQALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVEWRE  239 (313)
T ss_dssp             SCS-----SCGGGCCTTCEEEECCCSSTTCCCCCHHHHHHCSEEEESCHH
T ss_pred             Ccc-----cCHHHcCCCcEEEECCCCCCchhhcCHHHHhcCCEEEECCHH
Confidence            232     44567899999999865 353322222333334 45677554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.76  E-value=4.7e-05  Score=81.20  Aligned_cols=99  Identities=22%  Similarity=0.239  Sum_probs=70.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-c---chhcccccCCCCccEEEEcCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-L---SLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~---~~~~l~~~~~~~~divInat~~gm  453 (616)
                      .+.+++|+|+|+|++|++++..+...|++|++++|+.++.+.+.+.++... .   ...++.+ ...++|+||+|++...
T Consensus       165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~-~l~~aDvVi~~~~~p~  243 (377)
T 2vhw_A          165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEG-AVKRADLVIGAVLVPG  243 (377)
T ss_dssp             TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHH-HHHHCSEEEECCCCTT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHH-HHcCCCEEEECCCcCC
Confidence            467899999999999999999999999999999999999888777666532 1   1222222 2235899999997543


Q ss_pred             CCCCCCCccccc---cccCccEEEEEeeC
Q 007151          454 QPKVDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       454 ~p~~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                      ..  ....+..+   .++++.+++|+...
T Consensus       244 ~~--t~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          244 AK--APKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             SC--CCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             CC--CcceecHHHHhcCCCCcEEEEEecC
Confidence            21  11112222   35677889999853

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.75  E-value=2.4e-05  Score=80.36  Aligned_cols=76  Identities=20%  Similarity=0.262  Sum_probs=58.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc----cchhcc---ccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADL---ENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~----~~~~~l---~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    ..    .|+.+.   .++      .
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            4678999999998 6999999999999999999999999999988888742    11    233221   110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       117 ~g~iD~lvnnAg~~  130 (293)
T 3rih_A          117 FGALDVVCANAGIF  130 (293)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            34689999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.74  E-value=6.1e-06  Score=83.68  Aligned_cols=72  Identities=19%  Similarity=0.143  Sum_probs=50.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---c-------cccCCCCccEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---L-------ENFNPEDGMIL  445 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l-------~~~~~~~~div  445 (616)
                      .+++||+++|+|+ +|+|++++..|++.|++|++++|+.++  .+.+.+. ...|+.+   +       .+ ..+..|++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~~~~~~-~~~Dv~~~~~v~~~~~~~~~-~~G~iDil   82 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GLPEELF-VEADLTTKEGCAIVAEATRQ-RLGGVDVI   82 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--TSCTTTE-EECCTTSHHHHHHHHHHHHH-HTSSCSEE
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--CCCcEEE-EEcCCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3689999999998 599999999999999999999997542  1111110 0112211   1       11 34678999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        83 VnnAG~~   89 (261)
T 4h15_A           83 VHMLGGS   89 (261)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.74  E-value=7.9e-05  Score=73.30  Aligned_cols=75  Identities=28%  Similarity=0.350  Sum_probs=56.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc--CCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF--NPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~--~~~~~divIna  448 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++... +.  .++.+   +.++  .....|+|||+
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            467899999998 7999999999999999999999999988888776432 21  23322   2111  23458999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        84 Ag~~   87 (244)
T 1cyd_A           84 AALV   87 (244)
T ss_dssp             CCCC
T ss_pred             Cccc
Confidence            9864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.74  E-value=8.4e-05  Score=74.34  Aligned_cols=74  Identities=24%  Similarity=0.324  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----C-cc----cchhcc---ccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----G-HA----LSLADL---ENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~-~~----~~~~~l---~~~------~  438 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.    . ..    .|+.+.   ..+      .
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            467899999998 799999999999999999999999998888877652    1 21    233221   111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+ .|+|||+++..
T Consensus        84 ~g-id~lv~~Ag~~   96 (260)
T 2z1n_A           84 GG-ADILVYSTGGP   96 (260)
T ss_dssp             TC-CSEEEECCCCC
T ss_pred             cC-CCEEEECCCCC
Confidence            24 89999999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.74  E-value=3.7e-05  Score=75.49  Aligned_cols=74  Identities=24%  Similarity=0.281  Sum_probs=55.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cch-hcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSL-ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~-~~l~~~~~~~~divInat~~  451 (616)
                      ..+++++++|+|+ |++|++++..|.+.|++|+++.|+.++.+++.+. +. ..  .++ +++.+ ...+.|+|||+++.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-~~~~~~~~Dl~~~~~~-~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-GASDIVVANLEEDFSH-AFASIDAVVFAAGS   94 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-TCSEEEECCTTSCCGG-GGTTCSEEEECCCC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-CCceEEEcccHHHHHH-HHcCCCEEEECCCC
Confidence            4678999999998 8999999999999999999999999988777643 23 22  233 23333 35578999999986


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        95 ~   95 (236)
T 3e8x_A           95 G   95 (236)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.74  E-value=4.7e-05  Score=76.92  Aligned_cols=75  Identities=24%  Similarity=0.330  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc------CCCCccE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~------~~~~~di  444 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.. ..  .|+.+   +..+      .....|+
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            577899999998 7999999999999999999999999998888877642 11  23322   1110      1246899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus        86 lv~nAg~~   93 (270)
T 1yde_A           86 VVNNAGHH   93 (270)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.74  E-value=5e-05  Score=74.47  Aligned_cols=71  Identities=21%  Similarity=0.315  Sum_probs=53.6

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc---CCCCccEEEEcCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF---NPEDGMILANTTS  450 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~---~~~~~divInat~  450 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++++++.++++...    .++.+   +.++   .....|+|||+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            57999998 699999999999999999999999999999988775432    23322   1111   1233599999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      .+
T Consensus        82 ~~   83 (230)
T 3guy_A           82 SG   83 (230)
T ss_dssp             CC
T ss_pred             cC
Confidence            65

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.73  E-value=3.7e-05  Score=81.64  Aligned_cols=100  Identities=19%  Similarity=0.267  Sum_probs=66.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-c---chhcccccCCCCccEEEEcCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-L---SLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~---~~~~l~~~~~~~~divInat~~gm  453 (616)
                      .+++++|+|+|+|++|++++..+...|++|++++|+.++.+.+.+.++... .   +.+++.+ ...++|+||++++...
T Consensus       163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~-~~~~~DvVi~~~g~~~  241 (369)
T 2eez_A          163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKK-SVQHADLLIGAVLVPG  241 (369)
T ss_dssp             BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHH-HHHHCSEEEECCC---
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHH-HHhCCCEEEECCCCCc
Confidence            467899999999999999999999999999999999999888776665432 1   1222322 2335899999998642


Q ss_pred             CCCCCCCcccc---ccccCccEEEEEeeCC
Q 007151          454 QPKVDETPIPK---HALGHYALVFDAVYTP  480 (616)
Q Consensus       454 ~p~~~~~pi~~---~~l~~~~~v~Di~Y~P  480 (616)
                      ...  ...+..   ..++++.+++|+...+
T Consensus       242 ~~~--~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          242 AKA--PKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             ------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             ccc--chhHHHHHHHhhcCCCEEEEEecCC
Confidence            110  011222   2345678889988753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.73  E-value=5.4e-05  Score=75.78  Aligned_cols=74  Identities=28%  Similarity=0.453  Sum_probs=55.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------C-CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------N-PE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~-~~  440 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++   +...    .|+.+   +..+      . ..
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            56899999998 79999999999999999999999999888887765   2221    23322   1110      1 35


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++.|
T Consensus        83 ~id~lvnnAg~g   94 (260)
T 2qq5_A           83 RLDVLVNNAYAG   94 (260)
T ss_dssp             CCCEEEECCCTT
T ss_pred             CceEEEECCccc
Confidence            689999999644

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.73  E-value=3.7e-05  Score=78.27  Aligned_cols=75  Identities=21%  Similarity=0.293  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc----cchhcc-cc---c------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADL-EN---F------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~----~~~~~l-~~---~------~  438 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..    ..    +|+.+. ..   +      .
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            467899999998 7999999999999999999999999999888877632    11    233332 11   0      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        89 ~g~iD~lv~nAg~~  102 (311)
T 3o26_A           89 FGKLDILVNNAGVA  102 (311)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             CCCCCEEEECCccc
Confidence            24689999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.73  E-value=3.5e-05  Score=77.29  Aligned_cols=76  Identities=33%  Similarity=0.504  Sum_probs=57.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ..+++|++||+|+ ||+|++++..|++.|++|++++|+.++++++.+++.   ...    +++.+.   ..+      ..
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            3578899999998 799999999999999999999999999998887763   211    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++.+
T Consensus       105 g~id~lv~~Ag~~  117 (262)
T 3rkr_A          105 GRCDVLVNNAGVG  117 (262)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcc
Confidence            4689999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.73  E-value=5.8e-05  Score=75.28  Aligned_cols=71  Identities=24%  Similarity=0.427  Sum_probs=54.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccEEEE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~divIn  447 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.+++++++++++...    .|+.+   +..+      .....|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            57999998 799999999999999999999999999999888875322    23322   1110      2346899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        81 nAg~~   85 (248)
T 3asu_A           81 NAGLA   85 (248)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.73  E-value=4.6e-05  Score=75.62  Aligned_cols=74  Identities=31%  Similarity=0.461  Sum_probs=55.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCcc----cchhcc---ccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLADL---ENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~---~~~~----~~~~~l---~~~------~~~  440 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|+++.| +.++.+++++++   +...    .|+.+.   .++      ...
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998 79999999999999999999999 888888877665   2221    233221   110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        82 ~id~lv~nAg~~   93 (246)
T 2uvd_A           82 QVDILVNNAGVT   93 (246)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.72  E-value=3.9e-05  Score=76.92  Aligned_cols=76  Identities=26%  Similarity=0.385  Sum_probs=58.3

Q ss_pred             cccCCcEEEEEcc-c-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc----cchhcc---ccc------
Q 007151          377 SALAGKLFVVIGA-G-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA----LSLADL---ENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-G-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~----~~~~~l---~~~------  437 (616)
                      ..+++|+++|+|+ | |+|++++..|++.|++|++++|+.++.+++.+++..    ..    .|+.+.   .++      
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3578999999998 7 899999999999999999999999999888877731    11    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|+|||+++..
T Consensus        98 ~~g~id~li~~Ag~~  112 (266)
T 3o38_A           98 KAGRLDVLVNNAGLG  112 (266)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCCcEEEECCCcC
Confidence            124689999999865

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.72  E-value=5e-05  Score=77.69  Aligned_cols=75  Identities=29%  Similarity=0.434  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHC-----Ccc----cchhcccc---c----
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVG-----GHA----LSLADLEN---F----  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~---~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~l~~---~----  437 (616)
                      ++++|+++|+|+ ||+|++++..|++.|+   +|++++|+.++++++++++.     ...    .|+.+.++   +    
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            478999999998 6999999999999887   99999999999999887762     211    23322211   0    


Q ss_pred             --CCCCccEEEEcCCCC
Q 007151          438 --NPEDGMILANTTSIG  452 (616)
Q Consensus       438 --~~~~~divInat~~g  452 (616)
                        ..+..|+|||+++..
T Consensus       110 ~~~~g~iD~lVnnAG~~  126 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKA  126 (287)
T ss_dssp             CGGGCSCCEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCcC
Confidence              234689999999865

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.72  E-value=7.9e-06  Score=82.02  Aligned_cols=74  Identities=26%  Similarity=0.340  Sum_probs=51.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HCCcccchhc---cccc--CCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET-VGGHALSLAD---LENF--NPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~-~~~~~~~~~~---l~~~--~~~~~divInat~~  451 (616)
                      ++||+++|+|+ +|+|++++..|++.|++|++++|+.++.++.... ......|+.+   ++++  ..++.|++||+++.
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            68999999998 5999999999999999999999987664432110 0000123322   1111  35678999999986


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        89 ~   89 (242)
T 4b79_A           89 S   89 (242)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.72  E-value=9e-05  Score=75.51  Aligned_cols=76  Identities=26%  Similarity=0.390  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++    +...    .|+.+   +.++      .
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4578999999998 79999999999999999999999999888777665    3221    23322   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       102 ~g~id~li~~Ag~~  115 (302)
T 1w6u_A          102 AGHPNIVINNAAGN  115 (302)
T ss_dssp             TCSCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            34679999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.72  E-value=3e-05  Score=76.92  Aligned_cols=72  Identities=19%  Similarity=0.094  Sum_probs=54.0

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-E--CCHHHHHHHHHHH-CCcccchhccccc------CCCCccEEEEcC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIA-N--RTYDRARELAETV-GGHALSLADLENF------NPEDGMILANTT  449 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-n--Rt~~ka~~la~~~-~~~~~~~~~l~~~------~~~~~divInat  449 (616)
                      +|+++|+|+ ||+|++++..|++.|++|+++ +  |+.++.+++++++ +.+..+.+++..+      .....|+|||++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~A   80 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSND   80 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            478999998 799999999999999999999 7  9999998888776 2222222222110      235689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        81 g~~   83 (244)
T 1zmo_A           81 YIP   83 (244)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            865

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.72  E-value=3.7e-05  Score=76.04  Aligned_cols=76  Identities=30%  Similarity=0.349  Sum_probs=57.2

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c--c--cch--hc---cccc-----
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H--A--LSL--AD---LENF-----  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~--~--~~~--~~---l~~~-----  437 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..    .  .  .++  .+   +..+     
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4578999999998 7999999999999999999999999999888876631    1  1  122  11   1110     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|+|||+++..
T Consensus        90 ~~~g~id~lv~nAg~~  105 (247)
T 3i1j_A           90 HEFGRLDGLLHNASII  105 (247)
T ss_dssp             HHHSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEECCccC
Confidence             124689999999863

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.71  E-value=5.1e-05  Score=75.85  Aligned_cols=75  Identities=21%  Similarity=0.274  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.   ...    .++.+   +..+      ..+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578899999998 799999999999999999999999998888776652   111    23322   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        91 ~iD~lv~~Ag~~  102 (260)
T 2zat_A           91 GVDILVSNAAVN  102 (260)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.71  E-value=7e-05  Score=76.18  Aligned_cols=76  Identities=22%  Similarity=0.371  Sum_probs=56.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHCC----cc----cchhc---cccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGG----HA----LSLAD---LENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~~----~~----~~~~~---l~~~------  437 (616)
                      .++.+|+++|+|+ ||+|++++..|++.|++|++++| +.++.+++++++..    ..    .|+.+   +.++      
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3578899999998 69999999999999999999999 77888888776632    11    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      ..+..|+|||+++..
T Consensus       101 ~~g~iD~lv~nAg~~  115 (281)
T 3v2h_A          101 RFGGADILVNNAGVQ  115 (281)
T ss_dssp             HTSSCSEEEECCCCC
T ss_pred             HCCCCCEEEECCCCC
Confidence            235689999999875

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.71  E-value=3.2e-05  Score=77.86  Aligned_cols=76  Identities=20%  Similarity=0.182  Sum_probs=53.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~di  444 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++..+.....+...  .|+.+   +.++      .....|+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4578999999998 799999999999999999999999877665555554322  23322   1110      2356899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus       103 lv~nAg~~  110 (260)
T 3gem_A          103 VVHNASEW  110 (260)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcc
Confidence            99999865

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.71  E-value=4.7e-05  Score=77.02  Aligned_cols=76  Identities=22%  Similarity=0.316  Sum_probs=56.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-------------CHHHHHHHHHHHC---Ccc----cchhc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-------------TYDRARELAETVG---GHA----LSLAD--  433 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-------------t~~ka~~la~~~~---~~~----~~~~~--  433 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|             +.++.+++++.+.   ...    .|+.+  
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            3578999999998 69999999999999999999998             7777777766553   221    23322  


Q ss_pred             -cccc------CCCCccEEEEcCCCC
Q 007151          434 -LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 -l~~~------~~~~~divInat~~g  452 (616)
                       +.++      .....|+|||+++..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~  112 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVA  112 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence             1111      124689999999875

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=97.70  E-value=0.00021  Score=75.86  Aligned_cols=181  Identities=17%  Similarity=0.205  Sum_probs=108.6

Q ss_pred             cCCCeeEeccCcccHHHHHHHhc--cCCCCeEEEcccchHHHHhhhccccHhHhhhcceeEEEEeccCCeEEEEecCHH-
Q 007151          279 VGFNGVFVHLLVDDIAKFFQTYS--SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYV-  355 (616)
Q Consensus       279 lgl~~~Y~~~~~~~l~~~~~~l~--~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~-  355 (616)
                      -|+|..=..+++.+.+++++.++  .+.|.|+|.--=-..+.++.++++-..    ..            +-=+|-|-. 
T Consensus       107 agid~~pi~ldv~~~dE~v~~vk~~~p~f~~i~lED~~~p~af~il~r~r~~----~~------------Ipvf~DDiqG  170 (388)
T 1vl6_A          107 ADIDAFPICLSESEEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEE----MN------------IPVFHDDQQG  170 (388)
T ss_dssp             HCCEEEEEECSCCCHHHHHHHHHHTGGGCSEEEECSCCTTHHHHHHHHHHHH----CS------------SCEEEHHHHH
T ss_pred             cCCceEeEEeCCCCHHHHHHHHHHcCCcceEeCHhhcCCHHHHHHHHHhhhh----cC------------cceecccccc
Confidence            47885555566667888877764  457888865431123344444433222    11            222333433 


Q ss_pred             -------HHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC----HHHH------
Q 007151          356 -------GAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT----YDRA------  417 (616)
Q Consensus       356 -------G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt----~~ka------  417 (616)
                             |+.++++  +.         +.++++.+++|+|||.+|.+++..|...|+ +|+++||+    .+|.      
T Consensus       171 TasV~lAal~~A~~--i~---------g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~  239 (388)
T 1vl6_A          171 TAVVVSAAFLNALK--LT---------EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNE  239 (388)
T ss_dssp             HHHHHHHHHHHHHH--HH---------TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSH
T ss_pred             HHHHHHHHHHHHHH--Hh---------CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCH
Confidence                   3333333  11         236788999999999999999999999999 89999998    6653      


Q ss_pred             --HHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcccccc---ccCccEEEEEeeCCc--ccHHHHHHH
Q 007151          418 --RELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYTPK--ITRLLREAE  490 (616)
Q Consensus       418 --~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~---l~~~~~v~Di~Y~P~--~T~ll~~A~  490 (616)
                        +.++++.+. .....++.+ .+.++|++|-++..+.        +.++.   ..+..++||+. +|.  -||  ++|.
T Consensus       240 ~k~~~A~~~~~-~~~~~~L~e-av~~ADVlIG~Sap~l--------~t~emVk~Ma~~pIIfalS-NPt~E~~p--~~a~  306 (388)
T 1vl6_A          240 YHLEIARITNP-ERLSGDLET-ALEGADFFIGVSRGNI--------LKPEWIKKMSRKPVIFALA-NPVPEIDP--ELAR  306 (388)
T ss_dssp             HHHHHHHTSCT-TCCCSCHHH-HHTTCSEEEECSCSSC--------SCHHHHTTSCSSCEEEECC-SSSCSSCH--HHHH
T ss_pred             HHHHHHHhhhc-cCchhhHHH-HHccCCEEEEeCCCCc--------cCHHHHHhcCCCCEEEEcC-CCCCCCCH--HHHH
Confidence              344544321 112223333 3456899998875322        22222   34567999998 554  366  6677


Q ss_pred             HcC-CeEEcc
Q 007151          491 ESG-ATIVSG  499 (616)
Q Consensus       491 ~~G-~~~i~G  499 (616)
                      +.| +.+..|
T Consensus       307 ~~g~~i~atG  316 (388)
T 1vl6_A          307 EAGAFIVATG  316 (388)
T ss_dssp             HTTCSEEEES
T ss_pred             HhcCeEEEeC
Confidence            777 444566

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.70  E-value=9.3e-05  Score=74.62  Aligned_cols=76  Identities=18%  Similarity=0.286  Sum_probs=57.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .|+.+   +.++      ..
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3578999999998 799999999999999999999999998888776652   221    23322   1110      13


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       107 g~iD~li~~Ag~~  119 (272)
T 1yb1_A          107 GDVSILVNNAGVV  119 (272)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCcEEEECCCcC
Confidence            4689999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.70  E-value=5.9e-05  Score=76.43  Aligned_cols=76  Identities=22%  Similarity=0.335  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-------------CHHHHHHHHHHHCC---cc----cchhc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-------------TYDRARELAETVGG---HA----LSLAD--  433 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-------------t~~ka~~la~~~~~---~~----~~~~~--  433 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|             +.++.+++++.+..   ..    .|+.+  
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            3578999999998 69999999999999999999998             78888888776532   11    23322  


Q ss_pred             -cccc------CCCCccEEEEcCCCC
Q 007151          434 -LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 -l~~~------~~~~~divInat~~g  452 (616)
                       +.++      .....|+|||+++..
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~  116 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVL  116 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence             1111      134689999999875

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.70  E-value=4.2e-05  Score=76.27  Aligned_cols=75  Identities=19%  Similarity=0.262  Sum_probs=57.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++...    .++.+   +.++      .....|
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            578899999998 799999999999999999999999888888887775432    23322   1111      123689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        89 ~li~~Ag~~   97 (265)
T 2o23_A           89 VAVNCAGIA   97 (265)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccC
Confidence            999999865

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.69  E-value=3.9e-05  Score=77.89  Aligned_cols=76  Identities=24%  Similarity=0.295  Sum_probs=57.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhccc---cc-----CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADLE---NF-----NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l~---~~-----~~~  440 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .++.+..   ++     ...
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3578999999998 699999999999999999999999988888877652   221    2332211   10     014


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus       109 ~iD~lvnnAg~~  120 (275)
T 4imr_A          109 PVDILVINASAQ  120 (275)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.69  E-value=6.4e-05  Score=78.02  Aligned_cols=76  Identities=25%  Similarity=0.316  Sum_probs=57.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---C--cc----cchhccc---cc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---G--HA----LSLADLE---NF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~--~~----~~~~~l~---~~------~  438 (616)
                      ++.+|++||+|+ ||+|++++..|++.|++|++++|+.++++++.+.+.   .  ..    .|+.+..   .+      .
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999998 799999999999999999999999999988877653   1  11    2332211   10      1


Q ss_pred             CCCccEEEEcCCCCC
Q 007151          439 PEDGMILANTTSIGM  453 (616)
Q Consensus       439 ~~~~divInat~~gm  453 (616)
                      ....|+|||+++.+.
T Consensus        85 ~g~id~lv~nAg~~~   99 (319)
T 3ioy_A           85 FGPVSILCNNAGVNL   99 (319)
T ss_dssp             TCCEEEEEECCCCCC
T ss_pred             CCCCCEEEECCCcCC
Confidence            356899999998753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.69  E-value=5.5e-05  Score=75.30  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=54.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+. ++.++..+..+...    .|+.+   +..+      ..+..
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            467899999998 7999999999999999999999987 77665444444322    23322   1111      12468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        84 d~lv~nAg~~   93 (249)
T 2ew8_A           84 DILVNNAGIY   93 (249)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.69  E-value=8.9e-05  Score=74.00  Aligned_cols=72  Identities=28%  Similarity=0.363  Sum_probs=54.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~~~d  443 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   ...    .|+.+.   .++      ..+..|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999998 799999999999999999999999998888877652   221    233221   110      134689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      +|||+++..
T Consensus        82 ~lv~nAg~~   90 (256)
T 1geg_A           82 VIVNNAGVA   90 (256)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.68  E-value=4.2e-05  Score=77.18  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=55.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CC---cc----cchhc---cccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GG---HA----LSLAD---LENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~---~~----~~~~~---l~~~------  437 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++   ..   ..    .|+.+   +..+      
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            357899999998 79999999999999999999999999998888776   21   11    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      ..+..|+|||+++..
T Consensus        83 ~~g~id~lv~~Ag~~   97 (278)
T 1spx_A           83 KFGKLDILVNNAGAA   97 (278)
T ss_dssp             HHSCCCEEEECCC--
T ss_pred             HcCCCCEEEECCCCC
Confidence            123689999999864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.68  E-value=5.4e-05  Score=76.32  Aligned_cols=75  Identities=24%  Similarity=0.224  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH----CCcc----cchhcc----ccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV----GGHA----LSLADL----ENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~----~~~~----~~~~~l----~~~------  437 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++    +...    .|+.+.    ++.      
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            467899999998 79999999999999999999999 998888887765    3221    233222    110      


Q ss_pred             ---CCCCccEEEEcCCCC
Q 007151          438 ---NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ---~~~~~divInat~~g  452 (616)
                         .....|+|||+++..
T Consensus        88 ~~~~~g~id~lv~nAg~~  105 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAY  105 (276)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHhcCCCCEEEECCCCC
Confidence               123689999999865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.67  E-value=4.6e-05  Score=77.21  Aligned_cols=75  Identities=19%  Similarity=0.284  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchhcc---ccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLADL---ENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~------~~----~~~~~l---~~~------  437 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++..      ..    .|+.+.   ..+      
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999998 7999999999999999999999999998888776521      11    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|+|||+++..
T Consensus        83 ~~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAA   97 (280)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             hcCCCCEEEECCCCC
Confidence            124689999999865

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.67  E-value=4.8e-05  Score=81.26  Aligned_cols=99  Identities=18%  Similarity=0.191  Sum_probs=68.2

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--chhc----------------------
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SLAD----------------------  433 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~~~----------------------  433 (616)
                      .+.+++|+|+|+|++|++++..+...|++|++++|+.++.+.+.+ ++....  +.++                      
T Consensus       169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            457899999999999999999999999999999999888776654 665432  1110                      


Q ss_pred             ---ccccCCCCccEEEEcCCCCCCCCCCCCcccc---ccccCccEEEEEeeCC
Q 007151          434 ---LENFNPEDGMILANTTSIGMQPKVDETPIPK---HALGHYALVFDAVYTP  480 (616)
Q Consensus       434 ---l~~~~~~~~divInat~~gm~p~~~~~pi~~---~~l~~~~~v~Di~Y~P  480 (616)
                         +.+ ...++|+||+++.....+.  ...+..   ..++++.+++|+.+.+
T Consensus       248 ~~~l~~-~~~~aDvVi~~~~~pg~~~--~~li~~~~l~~mk~g~vivdva~~~  297 (384)
T 1l7d_A          248 AEAVLK-ELVKTDIAITTALIPGKPA--PVLITEEMVTKMKPGSVIIDLAVEA  297 (384)
T ss_dssp             HHHHHH-HHTTCSEEEECCCCTTSCC--CCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHH-HhCCCCEEEECCccCCCCC--CeeeCHHHHhcCCCCCEEEEEecCC
Confidence               222 2346899999995422221  111222   2356788999999753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.67  E-value=4.5e-05  Score=76.27  Aligned_cols=74  Identities=31%  Similarity=0.454  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~div  445 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++ ++++++++...  .|+.+   +.++      ..+..|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            357899999998 799999999999999999999999887 77776663211  23322   1110      12468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        82 v~~Ag~~   88 (256)
T 2d1y_A           82 VNNAAIA   88 (256)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999865

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.67  E-value=5.9e-05  Score=77.38  Aligned_cols=76  Identities=18%  Similarity=0.277  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHHHC---Ccc----cchhc---
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---  433 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------------~~ka~~la~~~~---~~~----~~~~~---  433 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+            .++++++++++.   ...    .|+.+   
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            4688999999998 699999999999999999999887            777777766542   221    23322   


Q ss_pred             cccc------CCCCccEEEEcCCCC
Q 007151          434 LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 l~~~------~~~~~divInat~~g  452 (616)
                      +.++      .....|+|||+++..
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~  128 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALA  128 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCC
Confidence            1110      134689999999865

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.66  E-value=9.1e-05  Score=73.58  Aligned_cols=76  Identities=24%  Similarity=0.302  Sum_probs=56.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++   +...    .|+.+   +.++      ..
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3577899999998 79999999999999999999999998888777665   2211    23322   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        89 ~~id~vi~~Ag~~  101 (260)
T 3awd_A           89 GRVDILVACAGIC  101 (260)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999865

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.65  E-value=7.1e-05  Score=75.68  Aligned_cols=76  Identities=17%  Similarity=0.212  Sum_probs=55.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHHHC---Ccc----cchhccc-
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLADLE-  435 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------------~~ka~~la~~~~---~~~----~~~~~l~-  435 (616)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+            .++.+++..++.   ...    .|+.+.+ 
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            3678999999998 699999999999999999999987            777776665542   221    2332211 


Q ss_pred             --cc------CCCCccEEEEcCCCC
Q 007151          436 --NF------NPEDGMILANTTSIG  452 (616)
Q Consensus       436 --~~------~~~~~divInat~~g  452 (616)
                        ++      .....|+|||+++..
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~  110 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGIC  110 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcC
Confidence              10      124689999999865

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.65  E-value=5.2e-05  Score=77.81  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=56.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---C---cc----cchhcc---ccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---G---HA----LSLADL---ENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~---~~----~~~~~l---~~~------  437 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++.   .   ..    .|+.+.   ..+      
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            467899999998 799999999999999999999999999888876652   1   11    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      ..+..|+|||+++..
T Consensus       103 ~~g~iD~lvnnAG~~  117 (297)
T 1xhl_A          103 KFGKIDILVNNAGAN  117 (297)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             hcCCCCEEEECCCcC
Confidence            124689999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.65  E-value=9e-05  Score=74.34  Aligned_cols=74  Identities=24%  Similarity=0.341  Sum_probs=55.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhcc---ccc------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLADL---ENF------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~l---~~~------~~  439 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..     ..    .|+.+.   ..+      ..
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            56899999998 7999999999999999999999999988877766632     11    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        85 g~id~lv~~Ag~~   97 (267)
T 2gdz_A           85 GRLDILVNNAGVN   97 (267)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4579999999864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.65  E-value=8.2e-05  Score=75.10  Aligned_cols=76  Identities=24%  Similarity=0.319  Sum_probs=55.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHHH---CCcc----cchhc---
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETV---GGHA----LSLAD---  433 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------------~~ka~~la~~~---~~~~----~~~~~---  433 (616)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+            .++.+++++.+   +...    .|+.+   
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            4678999999998 699999999999999999999987            77777766544   2221    23322   


Q ss_pred             cccc------CCCCccEEEEcCCCC
Q 007151          434 LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 l~~~------~~~~~divInat~~g  452 (616)
                      +.++      .....|+|||+++..
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCC
Confidence            1111      124689999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.65  E-value=4.7e-05  Score=76.18  Aligned_cols=74  Identities=26%  Similarity=0.318  Sum_probs=54.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHHH----CCcc----cchhcc---ccc------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETV----GGHA----LSLADL---ENF------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k-a~~la~~~----~~~~----~~~~~l---~~~------~~  439 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++ .+++++++    +...    .|+.+.   ..+      ..
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46799999998 699999999999999999999998877 77776654    3221    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        82 g~iD~lv~~Ag~~   94 (260)
T 1x1t_A           82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.63  E-value=0.00012  Score=73.97  Aligned_cols=76  Identities=26%  Similarity=0.397  Sum_probs=55.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHHH---CCcc----cchhc---
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETV---GGHA----LSLAD---  433 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------------~~ka~~la~~~---~~~~----~~~~~---  433 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+            .++.+++.+.+   +...    .|+.+   
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            3678999999998 799999999999999999999997            66666665544   2221    23322   


Q ss_pred             cccc------CCCCccEEEEcCCCC
Q 007151          434 LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 l~~~------~~~~~divInat~~g  452 (616)
                      +.++      .....|++||+++..
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~  110 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGIS  110 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCC
Confidence            1111      124689999999865

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.63  E-value=0.00011  Score=72.42  Aligned_cols=75  Identities=28%  Similarity=0.367  Sum_probs=56.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~~  441 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..  ..    .++.+   +..+      ....
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            467899999998 7999999999999999999999999988888777642  11    23322   1110      1235


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        83 id~li~~Ag~~   93 (251)
T 1zk4_A           83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.62  E-value=7.9e-05  Score=75.51  Aligned_cols=74  Identities=22%  Similarity=0.293  Sum_probs=55.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~~  441 (616)
                      +++ |+++|+|+ ||+|++++..|++.|++|++++|+.++++++++++..  ..    .|+.+   +..+      ....
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            456 89999998 6999999999999999999999999999998887743  11    23322   1110      1346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        98 iD~lvnnAG~~  108 (272)
T 2nwq_A           98 LRGLINNAGLA  108 (272)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            79999999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.61  E-value=8e-05  Score=76.07  Aligned_cols=47  Identities=30%  Similarity=0.378  Sum_probs=41.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~  424 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++ |+.++++++++++
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l   54 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   54 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            467899999998 6999999999999999999999 9999988887765

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.61  E-value=0.0001  Score=74.02  Aligned_cols=76  Identities=22%  Similarity=0.338  Sum_probs=57.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~  440 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++.  ..    .|+.+   +..+      ...
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3578999999998 7999999999999999999999999888888777643  11    23322   1111      123


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        92 ~id~li~~Ag~~  103 (278)
T 2bgk_A           92 KLDIMFGNVGVL  103 (278)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            689999999864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.60  E-value=4.4e-05  Score=77.72  Aligned_cols=76  Identities=29%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC----Ccc----cchhc----c---ccc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG----GHA----LSLAD----L---ENF--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~----~~~----~~~~~----l---~~~--  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+. ++++++++++.    ...    .++.+    .   ..+  
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            4578999999998 6999999999999999999999998 88887776653    111    23322    1   110  


Q ss_pred             ----CCCCccEEEEcCCCC
Q 007151          438 ----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ----~~~~~divInat~~g  452 (616)
                          .....|+|||+++..
T Consensus        99 ~~~~~~g~iD~lvnnAG~~  117 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAF  117 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHhcCCCCEEEECCCCC
Confidence                124689999999865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.60  E-value=5e-05  Score=75.38  Aligned_cols=74  Identities=26%  Similarity=0.419  Sum_probs=54.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-c--ccchhc---cccc--CCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-H--ALSLAD---LENF--NPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~--~~~~~~---l~~~--~~~~~divIna  448 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++++ ++.. .  ..|+.+   +.+.  .....|+|||+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            357899999998 79999999999999999999999998877765 4321 1  123322   1111  23568999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        82 Ag~~   85 (246)
T 2ag5_A           82 AGFV   85 (246)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            9864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.60  E-value=6.8e-05  Score=75.21  Aligned_cols=73  Identities=25%  Similarity=0.302  Sum_probs=54.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVGG---HA----LSLADL---ENF------NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~~  441 (616)
                      ++|+++|+|+ ||+|++++..|++.|++|++. +|+.++++++++++..   ..    .|+.+.   .++      ....
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 799999999999999998886 9999999988877632   11    233221   110      1246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++.+
T Consensus        83 id~lv~nAg~~   93 (258)
T 3oid_A           83 LDVFVNNAASG   93 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.59  E-value=0.00014  Score=74.13  Aligned_cols=48  Identities=33%  Similarity=0.533  Sum_probs=43.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   62 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL   62 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            3578999999998 79999999999999999999999999888887765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.59  E-value=0.00013  Score=71.84  Aligned_cols=75  Identities=31%  Similarity=0.461  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.+++    +...    .++.+   +..+      ..
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            467899999998 79999999999999999999999998888776654    3221    23322   1110      13


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        84 ~~~d~vi~~Ag~~   96 (248)
T 2pnf_A           84 DGIDILVNNAGIT   96 (248)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.58  E-value=0.00011  Score=74.25  Aligned_cols=76  Identities=30%  Similarity=0.363  Sum_probs=54.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC---Ccc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~---~~~----~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++. |+.++++++++++.   ...    .++.+   +.++      .
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999998 6999999999999999998885 45677777776652   221    23322   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|+|||+++..
T Consensus       107 ~g~iD~lvnnAg~~  120 (271)
T 3v2g_A          107 LGGLDILVNSAGIW  120 (271)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCcEEEECCCCC
Confidence            24689999999865

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.58  E-value=7.2e-05  Score=74.00  Aligned_cols=76  Identities=29%  Similarity=0.425  Sum_probs=56.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +..+      ..
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3578899999998 799999999999999999999999998888776652   211    23322   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        87 ~~~d~vi~~Ag~~   99 (255)
T 1fmc_A           87 GKVDILVNNAGGG   99 (255)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.57  E-value=0.0001  Score=74.88  Aligned_cols=75  Identities=21%  Similarity=0.236  Sum_probs=54.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhcccc---c------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLADLEN---F------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~l~~---~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++| +.++++++++++.   ...    .|+.+.++   +      ..
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            567899999998 69999999999999999999985 8888888777653   221    23322211   0      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       106 g~iD~lvnnAg~~  118 (280)
T 4da9_A          106 GRIDCLVNNAGIA  118 (280)
T ss_dssp             SCCCEEEEECC--
T ss_pred             CCCCEEEECCCcc
Confidence            4689999999863

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=97.57  E-value=0.00016  Score=74.31  Aligned_cols=189  Identities=18%  Similarity=0.230  Sum_probs=115.0

Q ss_pred             EEEEec-cCcccccCHHHHHHHHHHcCCCeeEeccCc----ccHHHHHHHh-ccCCCCeEEEcccchHHH--Hhhhcccc
Q 007151          255 VFGIIG-KPVGHSKSPILYNEAFKSVGFNGVFVHLLV----DDIAKFFQTY-SSNDFAGFSCTIPHKEAA--VKCCDEVD  326 (616)
Q Consensus       255 ~~~liG-~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~----~~l~~~~~~l-~~~~~~G~nVT~P~K~~v--~~~lD~ls  326 (616)
                      ..-++| +|.+++-- ..-.+..+++|+......++-    +++.+.++.+ .++.+.|+-|-.|+-..+  -..++.++
T Consensus        57 avIlVG~dpaS~~Yv-~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~  135 (303)
T 4b4u_A           57 ATILVGDDGASATYV-RMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAIS  135 (303)
T ss_dssp             EEEEESCCHHHHHHH-HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSC
T ss_pred             EEEEeCCCHHHHHHH-HHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccC
Confidence            344666 45555432 233557889999977665544    3566667767 578899999999963211  11122222


Q ss_pred             Hh--HhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccc-hhHHHHHHHHHHC
Q 007151          327 TV--AKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAG-GAGKALAYGAKAK  403 (616)
Q Consensus       327 ~~--A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAG-GagrAia~~L~~~  403 (616)
                      |.  +.-....|.=...  .|.-.=.-.--.|++..|++.           +.++.||+++|+|-+ -.||-++..|.+.
T Consensus       136 p~KDVDG~hp~N~G~L~--~g~~~~~PcTp~gv~~lL~~~-----------~i~l~Gk~vvViGRS~iVGkPla~LL~~~  202 (303)
T 4b4u_A          136 LAKDVDGVTCLGFGRMA--MGEAAYGSATPAGIMTILKEN-----------NIEIAGKHAVVVGRSAILGKPMAMMLLQA  202 (303)
T ss_dssp             GGGCTTCCCHHHHHHHH--TTCCCCCCHHHHHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHHT
T ss_pred             cccccCccCcchHHHhc--CCCCcccCccHHHHHHHHHHH-----------CCCCCCCEEEEEeccccccchHHHHHHhc
Confidence            21  1111111100000  000000011246777777652           368999999999987 5899999999999


Q ss_pred             CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc
Q 007151          404 GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI  482 (616)
Q Consensus       404 G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~  482 (616)
                      |+.|+++.+.....++.                  ..++||||.+++.   |.    .+..++++++.+|+|+-.++.+
T Consensus       203 ~ATVTi~Hs~T~dl~~~------------------~~~ADIvV~A~G~---p~----~i~~d~vk~GavVIDVGin~~~  256 (303)
T 4b4u_A          203 NATVTICHSRTQNLPEL------------------VKQADIIVGAVGK---AE----LIQKDWIKQGAVVVDAGFHPRD  256 (303)
T ss_dssp             TCEEEEECTTCSSHHHH------------------HHTCSEEEECSCS---TT----CBCGGGSCTTCEEEECCCBCCT
T ss_pred             CCEEEEecCCCCCHHHH------------------hhcCCeEEeccCC---CC----ccccccccCCCEEEEeceecCC
Confidence            99999987532211111                  1347999988774   22    3667889999999999887654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.57  E-value=0.00013  Score=74.01  Aligned_cols=76  Identities=18%  Similarity=0.215  Sum_probs=57.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .|+.+.   .++      ..
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4577899999998 799999999999999999999999998888877663   221    233221   110      13


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       120 ~~id~li~~Ag~~  132 (285)
T 2c07_A          120 KNVDILVNNAGIT  132 (285)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999865

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.56  E-value=0.00021  Score=63.66  Aligned_cols=71  Identities=21%  Similarity=0.329  Sum_probs=53.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--ch---hcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~---~~l~~~~~~~~divInat~~  451 (616)
                      +++++|+|+|.+|+.++..|.+.|.+|++++|+.++++.+.+.++...+  +.   +.+......++|+||.+++.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence            4689999999999999999999999999999999998888766543221  21   12222134578999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.56  E-value=7.5e-05  Score=75.46  Aligned_cols=76  Identities=26%  Similarity=0.373  Sum_probs=55.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhcc---ccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLADL---ENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~l---~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++..| +.++.+++++.+.   ...    .|+.+.   ..+      .
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999998 79999999999999999999888 7777777766652   221    233221   110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       104 ~g~id~lv~nAg~~  117 (269)
T 4dmm_A          104 WGRLDVLVNNAGIT  117 (269)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24689999999865

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=97.56  E-value=2.8e-06  Score=92.34  Aligned_cols=104  Identities=19%  Similarity=0.214  Sum_probs=70.4

Q ss_pred             hHhhhcceeEEEEeccCCeEEEEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-e
Q 007151          328 VAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-R  406 (616)
Q Consensus       328 ~A~~iGAVNTIv~~~~dg~l~G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~  406 (616)
                      ..+++|+||||+.+  +|++.|     .||...++..           ...+++++|+|+|+||+|..++..|+..|+ +
T Consensus         5 ~~~r~~~vntl~~~--~g~~~g-----~gf~~g~e~~-----------~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~   66 (434)
T 1tt5_B            5 WEGRWNHVKKFLER--SGPFTH-----PDFEPSTESL-----------QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQ   66 (434)
T ss_dssp             CTTTTHHHHHHHHS--CCSSCC-----TTCCCCSSHH-----------HHHHHTCCEEEECSSTHHHHHHHHHHHTTCCC
T ss_pred             hhhhhccceEEEcC--CCcccc-----cccccCHHHH-----------HHHhcCCEEEEECcCHHHHHHHHHHHHcCCCE
Confidence            45688999999976  888877     4554433211           012467899999999999999999999999 9


Q ss_pred             EEEEE----------CCH---------HHHHHHHHHHCC---cc--c----chhcc-cccCCCCccEEEEcCC
Q 007151          407 VVIAN----------RTY---------DRARELAETVGG---HA--L----SLADL-ENFNPEDGMILANTTS  450 (616)
Q Consensus       407 V~v~n----------Rt~---------~ka~~la~~~~~---~~--~----~~~~l-~~~~~~~~divInat~  450 (616)
                      ++|++          |..         .|++.+++.+..   ..  .    .+.+. .+ ...++|+||+|+-
T Consensus        67 i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~~~-~~~~~DlVi~~~D  138 (434)
T 1tt5_B           67 IHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDT-FYRQFHIIVCGLD  138 (434)
T ss_dssp             EEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBCHH-HHTTCSEEEECCS
T ss_pred             EEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhhHH-HhcCCCEEEECCC
Confidence            99994          542         477777665532   11  0    11111 11 2356899999863

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.55  E-value=9.7e-05  Score=74.60  Aligned_cols=75  Identities=29%  Similarity=0.368  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhccc---cc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLADLE---NF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~l~---~~------~  438 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++.     ...    .|+.+.+   .+      .
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            478999999998 799999999999999999999999998888876652     111    2332211   10      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       109 ~g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          109 HSGVDICINNAGLA  122 (279)
T ss_dssp             HCCCSEEEECCCCC
T ss_pred             CCCCCEEEECCCCC
Confidence            23689999999864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.54  E-value=6e-05  Score=76.15  Aligned_cols=74  Identities=26%  Similarity=0.313  Sum_probs=56.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~di  444 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++...    .++.+.   ..+      .....|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35789999998 799999999999999999999999999888887765422    233221   110      1236899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      |||+++..
T Consensus        83 lv~~Ag~~   90 (281)
T 3m1a_A           83 LVNNAGRT   90 (281)
T ss_dssp             EEECCCCE
T ss_pred             EEECCCcC
Confidence            99999864

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.54  E-value=9.2e-05  Score=78.80  Aligned_cols=97  Identities=22%  Similarity=0.194  Sum_probs=68.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch-----------------------hccc
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-----------------------ADLE  435 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~-----------------------~~l~  435 (616)
                      +.+++|+|+|+|.+|+.++..+...|++|++++|+.++.+.+.+ ++...+++                       +++.
T Consensus       182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            56789999999999999999999999999999999988877754 55433221                       1222


Q ss_pred             ccCCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEeeC
Q 007151          436 NFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       436 ~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                      + ...++|+||+++...-.+  ....+..+   .++++.+++|+.-.
T Consensus       261 e-~l~~aDIVI~tv~iPg~~--ap~Lvt~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          261 D-AITKFDIVITTALVPGRP--APRLVTAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             H-HHTTCSEEEECCCCTTSC--CCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             H-HHhcCCEEEECCCCCCcc--cceeecHHHHhcCCCCcEEEEEeCC
Confidence            2 346789999987432111  11113333   34678899999754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.53  E-value=0.00017  Score=71.97  Aligned_cols=47  Identities=30%  Similarity=0.434  Sum_probs=42.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKA---KGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~---~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      ++++|+++|+|+ ||+|++++..|++   .|++|++++|+.++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l   53 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEEL   53 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHH
Confidence            567899999998 6999999999999   8999999999999988887766

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.53  E-value=0.00011  Score=73.03  Aligned_cols=47  Identities=28%  Similarity=0.380  Sum_probs=42.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL   51 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence            467899999998 79999999999999999999999999888876654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.52  E-value=0.00013  Score=71.93  Aligned_cols=72  Identities=26%  Similarity=0.309  Sum_probs=54.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++    +...    .|+.+   +.++      .....
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999998 79999999999999999999999999988887776    2111    23322   1110      12368


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        82 d~li~~Ag~~   91 (250)
T 2cfc_A           82 DVLVNNAGIT   91 (250)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.52  E-value=0.00013  Score=73.94  Aligned_cols=75  Identities=39%  Similarity=0.508  Sum_probs=53.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc-----CCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF-----NPE  440 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~-----~~~  440 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+ ++.+++++++..   ..    .|+.+.   ..+     ...
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            4678999999998 699999999999999999999987 445556555421   11    233221   111     124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       106 ~iD~lv~nAg~~  117 (273)
T 3uf0_A          106 RVDVLVNNAGII  117 (273)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            689999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.52  E-value=0.00011  Score=73.46  Aligned_cols=72  Identities=22%  Similarity=0.316  Sum_probs=53.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH--HHHHHHHHC---Ccc----cchhcc---ccc------CCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR--ARELAETVG---GHA----LSLADL---ENF------NPED  441 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k--a~~la~~~~---~~~----~~~~~l---~~~------~~~~  441 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++  ++++++++.   ...    .|+.+.   ..+      ....
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            589999998 799999999999999999999999877  777776652   221    233221   110      1246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        82 iD~lv~nAg~~   92 (258)
T 3a28_C           82 FDVLVNNAGIA   92 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.51  E-value=6.3e-05  Score=75.94  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=52.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--ccchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--ALSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~--~~~~~~---l~~~------~~~~~div  445 (616)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++... ...  ..|+.+   +.++      ..+..|+|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT-TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC-CceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            467899999998 7999999999999999999999998887665322 111  123322   1110      12468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        92 vnnAg~~   98 (266)
T 3p19_A           92 VNNAGMM   98 (266)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            9999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.51  E-value=0.00011  Score=73.72  Aligned_cols=75  Identities=23%  Similarity=0.205  Sum_probs=54.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++ .|+.+++++..+++.   ...    .|+.+.   ..+      ..
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            578999999998 699999999999999999887 677777777766653   211    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        85 g~id~lv~nAg~~   97 (259)
T 3edm_A           85 GEIHGLVHVAGGL   97 (259)
T ss_dssp             CSEEEEEECCCCC
T ss_pred             CCCCEEEECCCcc
Confidence            4689999999754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.50  E-value=0.00019  Score=72.48  Aligned_cols=75  Identities=31%  Similarity=0.359  Sum_probs=52.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-------HHHHHHHH---CCcc----cchhcc---ccc--
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETV---GGHA----LSLADL---ENF--  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k-------a~~la~~~---~~~~----~~~~~l---~~~--  437 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++       .+++++.+   +...    .|+.+.   .++  
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            578999999998 699999999999999999999998643       33443333   3221    233221   110  


Q ss_pred             ----CCCCccEEEEcCCCC
Q 007151          438 ----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ----~~~~~divInat~~g  452 (616)
                          .....|++||+++..
T Consensus        83 ~~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCcc
Confidence                124689999999865

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.50  E-value=0.0001  Score=76.75  Aligned_cols=46  Identities=28%  Similarity=0.369  Sum_probs=41.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV  424 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~  424 (616)
                      +++|++||+|+ ||+|++++..|++.|++|++++ |+.++++++++++
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l   91 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   91 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            67899999998 7999999999999999999999 9999988887765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.49  E-value=0.00016  Score=73.49  Aligned_cols=76  Identities=26%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-------HHHHHHHHH---CCcc----cchhc---cccc-
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-------RARELAETV---GGHA----LSLAD---LENF-  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-------ka~~la~~~---~~~~----~~~~~---l~~~-  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+       +.+++++++   +...    .|+.+   +.++ 
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            4678999999998 69999999999999999999999866       344444433   3221    23322   1110 


Q ss_pred             -----CCCCccEEEEcCCCC
Q 007151          438 -----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -----~~~~~divInat~~g  452 (616)
                           .....|++||+++..
T Consensus        85 ~~~~~~~g~id~lvnnAg~~  104 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAI  104 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence                 124689999999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.48  E-value=9.2e-05  Score=74.44  Aligned_cols=76  Identities=18%  Similarity=0.205  Sum_probs=55.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHHHCC---cc----cchhc---cccc-----
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---TYDRARELAETVGG---HA----LSLAD---LENF-----  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR---t~~ka~~la~~~~~---~~----~~~~~---l~~~-----  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|   +.++++++++++..   ..    .|+.+   +..+     
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999998 69999999999999999999866   45677777776632   11    23322   1111     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|++||+++..
T Consensus        87 ~~~g~iD~lvnnAg~~  102 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKV  102 (262)
T ss_dssp             HHHCSEEEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence             124689999999865

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.48  E-value=0.00011  Score=73.19  Aligned_cols=75  Identities=27%  Similarity=0.387  Sum_probs=55.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++| +.++.+++.+++.   ...    .++.+   +.++      ..
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999998 79999999999999999999999 8888887776652   211    23322   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        84 g~id~li~~Ag~~   96 (261)
T 1gee_A           84 GKLDVMINNAGLE   96 (261)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999864

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.46  E-value=0.00016  Score=70.70  Aligned_cols=73  Identities=26%  Similarity=0.287  Sum_probs=54.7

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---cccc------CCCCccEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~------~~~~~divI  446 (616)
                      .+|+++|+|+ ||+|++++..|.+.|++|++++|+.++.+++.++++. ..  .++.+   +.++      .....|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3688999998 7999999999999999999999999998888776542 11  23222   1110      123689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++.+
T Consensus        84 ~~Ag~~   89 (234)
T 2ehd_A           84 NNAGVG   89 (234)
T ss_dssp             ECCCCC
T ss_pred             ECCCcC
Confidence            999865

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.46  E-value=0.00012  Score=73.69  Aligned_cols=76  Identities=22%  Similarity=0.256  Sum_probs=54.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.| +.+..+++.+.+.   ...    .++.+   +.++      .
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4688999999998 79999999999999999999999 5666666665542   221    23222   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       105 ~g~id~li~nAg~~  118 (271)
T 4iin_A          105 DGGLSYLVNNAGVV  118 (271)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24689999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.46  E-value=0.00015  Score=72.49  Aligned_cols=76  Identities=20%  Similarity=0.069  Sum_probs=56.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.   ...    .++.+   +..+      ..
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3578899999998 799999999999999999999999998888776652   211    23322   1111      11


Q ss_pred             -CCccEEEEcCCCC
Q 007151          440 -EDGMILANTTSIG  452 (616)
Q Consensus       440 -~~~divInat~~g  452 (616)
                       ...|+|||+++..
T Consensus        90 ~~~id~li~~Ag~~  103 (266)
T 1xq1_A           90 GGKLDILINNLGAI  103 (266)
T ss_dssp             TTCCSEEEEECCC-
T ss_pred             CCCCcEEEECCCCC
Confidence             5689999999864

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.45  E-value=2.2e-05  Score=79.46  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=49.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divI  446 (616)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+.++....+..+   ..|+.+   +.++      .....|+||
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF---KIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEE---ECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEE---EecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999999998 69999999999999999999999876542210000   122221   1110      124689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        87 ~nAg~~   92 (269)
T 3vtz_A           87 NNAGIE   92 (269)
T ss_dssp             ECCCCC
T ss_pred             ECCCcC
Confidence            999864

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.45  E-value=5e-05  Score=76.36  Aligned_cols=71  Identities=14%  Similarity=0.220  Sum_probs=53.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH-------------------HHHHHHHHHHCC-----cccc---
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGG-----HALS---  430 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~-------------------~ka~~la~~~~~-----~~~~---  430 (616)
                      +++++|+|+|+||+|..++..|+..|+ +|++++++.                   .|++.+++.+..     ....   
T Consensus        29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            567899999999999999999999999 999999997                   788888877642     1100   


Q ss_pred             -hh--cccccCCCCccEEEEcCC
Q 007151          431 -LA--DLENFNPEDGMILANTTS  450 (616)
Q Consensus       431 -~~--~l~~~~~~~~divInat~  450 (616)
                       ++  ++.+ ...++|+||+|++
T Consensus       109 ~~~~~~~~~-~~~~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLDDAELAA-LIAEHDLVLDCTD  130 (249)
T ss_dssp             CCCHHHHHH-HHHTSSEEEECCS
T ss_pred             cCCHhHHHH-HHhCCCEEEEeCC
Confidence             11  1112 1345799999885

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.45  E-value=0.00017  Score=74.67  Aligned_cols=75  Identities=24%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------------HHHHHHHHHHHC---Ccc----cchhc---c
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------------YDRARELAETVG---GHA----LSLAD---L  434 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------------~~ka~~la~~~~---~~~----~~~~~---l  434 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+            .++++++++.+.   ...    .|+.+   +
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            578999999998 699999999999999999999876            677777665542   221    23322   1


Q ss_pred             ccc------CCCCccEEEEcCCCC
Q 007151          435 ENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       435 ~~~------~~~~~divInat~~g  452 (616)
                      .++      .....|+|||+++..
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~  146 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGIS  146 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            110      124689999999875

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.45  E-value=8.6e-05  Score=79.85  Aligned_cols=97  Identities=22%  Similarity=0.256  Sum_probs=67.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh-------------------------
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA-------------------------  432 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~-------------------------  432 (616)
                      .+.+++|+|+|+|++|++++..+...|++|++++|+.++.+.+ ++++...+.++                         
T Consensus       169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            3568999999999999999999999999999999999887775 55665433210                         


Q ss_pred             cccccCCCCccEEEEcCCC-CCCCCCCCCccccc---cccCccEEEEEeeC
Q 007151          433 DLENFNPEDGMILANTTSI-GMQPKVDETPIPKH---ALGHYALVFDAVYT  479 (616)
Q Consensus       433 ~l~~~~~~~~divInat~~-gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~  479 (616)
                      .+.+ ...++|+||+++.. |.. .  ...+..+   .++++.+++|+.+.
T Consensus       248 ~l~e-~~~~aDvVI~~~~~pg~~-a--p~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          248 LFAA-QAKEVDIIVTTALIPGKP-A--PKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHH-HHHHCSEEEECCCCTTSC-C--CCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHH-HhCCCCEEEECCccCCCC-C--CeeeCHHHHhcCCCCcEEEEEcCC
Confidence            1222 22358999999654 321 1  1123322   35678899999864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.44  E-value=0.00015  Score=74.06  Aligned_cols=76  Identities=26%  Similarity=0.337  Sum_probs=52.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHHH---CCcc----cchhcc---ccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETV---GGHA----LSLADL---ENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k-a~~la~~~---~~~~----~~~~~l---~~~------~  438 (616)
                      .++++|++||+|+ ||+|++++..|++.|++|++++|+.++ .+.+.+.+   +...    .|+.+.   .++      .
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999998 799999999999999999999998654 33333332   2221    233221   110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       123 ~g~iD~lvnnAg~~  136 (291)
T 3ijr_A          123 LGSLNILVNNVAQQ  136 (291)
T ss_dssp             HSSCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCc
Confidence            34689999998864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.44  E-value=7.4e-05  Score=74.65  Aligned_cols=73  Identities=22%  Similarity=0.268  Sum_probs=48.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc-----CCCCcc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLADL---ENF-----NPEDGM  443 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~-----~~~~~d  443 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++   +.++++...    .|+.+.   ..+     .....|
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            4678999999998 699999999999999999999996543   334444321    233221   110     124689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 ~lv~nAg~~   90 (257)
T 3tl3_A           82 IVVNCAGTG   90 (257)
T ss_dssp             EEEECGGGS
T ss_pred             EEEECCCCC
Confidence            999999864

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.44  E-value=0.0002  Score=71.24  Aligned_cols=74  Identities=20%  Similarity=0.257  Sum_probs=55.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYDRARELAETVG---GHA----LSLADL---ENF------NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~-~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~~~  441 (616)
                      ++|+++|+|+ ||+|++++..|++ .|++|++++|+.++.+++.+++.   ...    .++.+.   ..+      ....
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999998 7999999999999 99999999999998888776652   211    233221   110      1236


Q ss_pred             ccEEEEcCCCCC
Q 007151          442 GMILANTTSIGM  453 (616)
Q Consensus       442 ~divInat~~gm  453 (616)
                      .|+|||+++...
T Consensus        83 id~li~~Ag~~~   94 (276)
T 1wma_A           83 LDVLVNNAGIAF   94 (276)
T ss_dssp             EEEEEECCCCCC
T ss_pred             CCEEEECCcccc
Confidence            899999998653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.44  E-value=0.00021  Score=73.23  Aligned_cols=76  Identities=21%  Similarity=0.261  Sum_probs=53.7

Q ss_pred             cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHH---HHHHHHHHCCc-c--cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDR---ARELAETVGGH-A--LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~k---a~~la~~~~~~-~--~~~~~---l~~~------~  438 (616)
                      ..+++|+++|+|++   |+|++++..|++.|++|++++|+.+.   .+++.+..+.. .  .|+.+   +.++      .
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999984   99999999999999999999998643   33444444431 1  23322   1111      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       106 ~g~iD~lVnnAG~~  119 (296)
T 3k31_A          106 WGSLDFVVHAVAFS  119 (296)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24689999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.43  E-value=0.00014  Score=72.63  Aligned_cols=72  Identities=18%  Similarity=0.183  Sum_probs=54.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHCCcc----cchhcc---ccc------CCCCccE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGHA----LSLADL---ENF------NPEDGMI  444 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G--~~V~v~nRt~~ka~~la~~~~~~~----~~~~~l---~~~------~~~~~di  444 (616)
                      +|+++|+|+ ||+|++++..|++.|  ++|++++|+.+++++++++++...    .|+.+.   .++      .....|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            589999998 699999999999986  589999999999999988876432    233221   110      1246899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        82 lvnnAg~~   89 (254)
T 3kzv_A           82 LVANAGVL   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEECCccc
Confidence            99999863

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.43  E-value=0.00019  Score=71.16  Aligned_cols=73  Identities=22%  Similarity=0.318  Sum_probs=53.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETVG---GHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~  441 (616)
                      .+|+++|+|+ ||+|++++..|++.|++|++..| +.++++++++++.   ...    .|+.+   +.++      ....
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 79999999999999999988766 6788888776653   221    23322   1110      1246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        83 id~lv~nAg~~   93 (246)
T 3osu_A           83 LDVLVNNAGIT   93 (246)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.42  E-value=0.00032  Score=63.24  Aligned_cols=70  Identities=21%  Similarity=0.277  Sum_probs=53.0

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--ch---hcccccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL---ADLENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~---~~l~~~~~~~~divInat~  450 (616)
                      ..++++|+|+|.+|++++..|.+.|++|++++|++++.+.+.+. +...+  +.   +.+......++|++|.+++
T Consensus         5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            35689999999999999999999999999999999998887653 32221  22   1222223457899999888

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.42  E-value=8.5e-05  Score=66.54  Aligned_cols=72  Identities=18%  Similarity=0.248  Sum_probs=50.9

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--ch---hcccccCCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~---~~l~~~~~~~~divInat~~  451 (616)
                      +++++++|+|+|++|+.++..|.+.|++|++++|+.++.+.+.+. +...+  +.   +.+.+....++|++|++++.
T Consensus         4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            456789999999999999999999999999999998887665432 22111  21   22222123568999998874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.42  E-value=0.00024  Score=72.66  Aligned_cols=76  Identities=25%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHH---CCcc----cchhcc---ccc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETV---GGHA----LSLADL---ENF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt--~~ka~~la~~~---~~~~----~~~~~l---~~~------  437 (616)
                      .++++|++||+|+ ||+|++++..|++.|++|+++.|+  .++++++.+.+   +...    .|+.+.   .++      
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999998 699999999999999999999886  34455554433   3221    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus       125 ~~g~iD~lv~nAg~~  139 (294)
T 3r3s_A          125 ALGGLDILALVAGKQ  139 (294)
T ss_dssp             HHTCCCEEEECCCCC
T ss_pred             HcCCCCEEEECCCCc
Confidence            134689999999864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.42  E-value=0.00016  Score=71.81  Aligned_cols=76  Identities=21%  Similarity=0.285  Sum_probs=53.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH----HCCcc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAET----VGGHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~----~~~~~----~~~~~---l~~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..++    .+...    .|+.+   +..+      .
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            4578899999998 7999999999999999999999965544443333    33221    23322   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        90 ~~~id~li~~Ag~~  103 (265)
T 1h5q_A           90 LGPISGLIANAGVS  103 (265)
T ss_dssp             SCSEEEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            34689999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.42  E-value=0.00058  Score=70.08  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCc-----ccchhccccc--CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGH-----ALSLADLENF--NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~-----~~~~~~l~~~--~~~~~div  445 (616)
                      .+++++++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+.+    +..     ..++.+...+  ...+.|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            467899999998 89999999999999999999999988877766543    111     1233332221  24468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        88 ih~A~~~   94 (342)
T 1y1p_A           88 AHIASVV   94 (342)
T ss_dssp             EECCCCC
T ss_pred             EEeCCCC
Confidence            9998764

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.41  E-value=0.0021  Score=67.82  Aligned_cols=128  Identities=23%  Similarity=0.271  Sum_probs=87.3

Q ss_pred             HHHHHHHHHhhhcccCCCCCCccc-ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSS-ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA  432 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~-~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~  432 (616)
                      +.|.+..++..++..       +. +++||++.|.|.|.+|+.++..|...|++|++++++.++ ++.+++++...++.+
T Consensus       154 g~Gv~~~~~~~~~~~-------G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~v~~~  225 (355)
T 1c1d_A          154 AVGVFEAMKATVAHR-------GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTAVALE  225 (355)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEECCGG
T ss_pred             HHHHHHHHHHHHHhc-------CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEEeChH
Confidence            578887777666532       23 689999999999999999999999999999999999877 667777765555444


Q ss_pred             cccccCCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEeeCCccc-HHHHHHHHcCCeEEccHH
Q 007151          433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVYTPKIT-RLLREAEESGATIVSGLE  501 (616)
Q Consensus       433 ~l~~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y~P~~T-~ll~~A~~~G~~~i~Gl~  501 (616)
                      ++-.   ..+|+++.|+--+.        +..+   .++ ..++++..-.|... .-.+.-+++|+.+.++.-
T Consensus       226 ell~---~~~DIliP~A~~~~--------I~~~~~~~lk-~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~~  286 (355)
T 1c1d_A          226 DVLS---TPCDVFAPCAMGGV--------ITTEVARTLD-CSVVAGAANNVIADEAASDILHARGILYAPDFV  286 (355)
T ss_dssp             GGGG---CCCSEEEECSCSCC--------BCHHHHHHCC-CSEECCSCTTCBCSHHHHHHHHHTTCEECCHHH
T ss_pred             Hhhc---CccceecHhHHHhh--------cCHHHHhhCC-CCEEEECCCCCCCCHHHHHHHHhCCEEEECCeE
Confidence            3322   25799997643221        2222   233 46777777666533 333444677887776544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.41  E-value=0.00012  Score=73.77  Aligned_cols=76  Identities=21%  Similarity=0.300  Sum_probs=54.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC---Ccc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~---~~~----~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.. |+.++++++++++.   ...    .|+.+   +.++      .
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4688999999998 6999999999999999998865 46777777766652   221    23322   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        94 ~g~id~lvnnAg~~  107 (270)
T 3is3_A           94 FGHLDIAVSNSGVV  107 (270)
T ss_dssp             HSCCCEEECCCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            24689999999875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.41  E-value=0.00027  Score=69.52  Aligned_cols=72  Identities=18%  Similarity=0.308  Sum_probs=54.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCC-------eEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc-----
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGA-------RVVIANRTYDRARELAETVG---GHA----LSLAD---LENF-----  437 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~-------~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~-----  437 (616)
                      +|+++|+|+ ||+|++++..|++.|+       +|++++|+.++.+++.+++.   ...    .++.+   +..+     
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            578999998 7999999999999999       99999999999888877763   211    23322   1110     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|+|||+++..
T Consensus        82 ~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHTSCCSEEEECCCCC
T ss_pred             HhCCCCCEEEEcCCcC
Confidence             134689999999865

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.41  E-value=0.0001  Score=74.36  Aligned_cols=75  Identities=28%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++. .|+.++++++++++.   ...    .|+.+.   .++      ..
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            356899999998 699999999999999998886 667777777776552   221    233221   111      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       104 g~iD~lvnnAG~~  116 (267)
T 3u5t_A          104 GGVDVLVNNAGIM  116 (267)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4689999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.41  E-value=0.00027  Score=70.80  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=52.6

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCc-c--cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGH-A--LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~-~--~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+   ||+|++++..|++.|++|++++|+.   +..+++.+..+.. .  .|+.+   +.++      ...
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            67899999997   5999999999999999999999986   4445554443321 1  23322   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        87 ~iD~lv~~Ag~~   98 (265)
T 1qsg_A           87 KFDGFVHSIGFA   98 (265)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.41  E-value=0.00019  Score=72.76  Aligned_cols=48  Identities=31%  Similarity=0.542  Sum_probs=43.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV  424 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~  424 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   72 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC   72 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            3478999999998 79999999999999999999999999888877654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.40  E-value=0.00012  Score=73.78  Aligned_cols=75  Identities=19%  Similarity=0.224  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHHHCCcc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETVGGHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~~k-a~~la~~~~~~~----~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+   ||+|++++..|++.|++|++++|+.++ .++++++++...    .|+.+   +..+      ...
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            367899999995   799999999999999999999998766 466666554321    23322   1110      123


Q ss_pred             ---CccEEEEcCCCC
Q 007151          441 ---DGMILANTTSIG  452 (616)
Q Consensus       441 ---~~divInat~~g  452 (616)
                         ..|+|||+++..
T Consensus        84 ~~~~iD~lv~nAg~~   98 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFM   98 (269)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             CCCCceEEEECCccC
Confidence               689999999865

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.40  E-value=0.00022  Score=71.91  Aligned_cols=75  Identities=15%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHHHCC-cc--cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~~---ka~~la~~~~~-~~--~~~~~---l~~~------~~  439 (616)
                      ++++|+++|+|+   ||+|++++..|++.|++|++++|+.+   ..+++.+..+. ..  .|+.+   +..+      ..
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999997   69999999999999999999999875   44555544432 11  23322   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        83 g~id~lv~nAg~~   95 (275)
T 2pd4_A           83 GSLDFIVHSVAFA   95 (275)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            4689999999875

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.39  E-value=0.00032  Score=76.87  Aligned_cols=47  Identities=34%  Similarity=0.380  Sum_probs=42.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ..+.||+|+|+|+|++|++++..|+..|++|++++|++.++++.+..
T Consensus       261 ~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~  307 (488)
T 3ond_A          261 VMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATME  307 (488)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             CcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh
Confidence            46889999999999999999999999999999999999887766543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.39  E-value=0.0002  Score=72.57  Aligned_cols=76  Identities=21%  Similarity=0.361  Sum_probs=53.2

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHHH---CCcc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-ARELAETV---GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k-a~~la~~~---~~~~----~~~~~---l~~~------~  438 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.++ .+++++++   +...    .++.+   +..+      .
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999998 799999999999999999999998543 45544443   2221    23322   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus       105 ~g~iD~lv~~Ag~~  118 (283)
T 1g0o_A          105 FGKLDIVCSNSGVV  118 (283)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence            24689999999865

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.39  E-value=9.7e-05  Score=76.59  Aligned_cols=76  Identities=30%  Similarity=0.451  Sum_probs=55.9

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC----------HHHHHHHHHHHC---Ccc----cchhc---cc
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT----------YDRARELAETVG---GHA----LSLAD---LE  435 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt----------~~ka~~la~~~~---~~~----~~~~~---l~  435 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+          .++++++++++.   ...    .|+.+   +.
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            3578999999998 699999999999999999999987          677777776653   211    23322   11


Q ss_pred             cc------CCCCccEEEEcCCCC
Q 007151          436 NF------NPEDGMILANTTSIG  452 (616)
Q Consensus       436 ~~------~~~~~divInat~~g  452 (616)
                      ++      .....|+|||+++..
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            10      124689999999865

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.39  E-value=0.00031  Score=72.17  Aligned_cols=111  Identities=13%  Similarity=0.057  Sum_probs=74.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .+++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+. +... ...+..+ ...++|+||-++|....  ....
T Consensus         7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-~~~~~~e-~~~~aDvvi~~vp~~~~--~~~v   81 (303)
T 3g0o_A            7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE-GACG-AAASARE-FAGVVDALVILVVNAAQ--VRQV   81 (303)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSE-EESSSTT-TTTTCSEEEECCSSHHH--HHHH
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc-CCcc-ccCCHHH-HHhcCCEEEEECCCHHH--HHHH
Confidence            4689999999999999999999999999999999999888764 3221 0222333 34568999999985311  0000


Q ss_pred             -----ccccccccCccEEEEEeeCCccc-H-HHHHHHHcCCeEE
Q 007151          461 -----PIPKHALGHYALVFDAVYTPKIT-R-LLREAEESGATIV  497 (616)
Q Consensus       461 -----pi~~~~l~~~~~v~Di~Y~P~~T-~-ll~~A~~~G~~~i  497 (616)
                           .+ ...++++.+++|..-.+..+ . +.+..++.|..++
T Consensus        82 ~~~~~~l-~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~  124 (303)
T 3g0o_A           82 LFGEDGV-AHLMKPGSAVMVSSTISSADAQEIAAALTALNLNML  124 (303)
T ss_dssp             HC--CCC-GGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred             HhChhhH-HhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEE
Confidence                 11 12356778999998654432 2 2334455676654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.38  E-value=0.00016  Score=75.21  Aligned_cols=76  Identities=24%  Similarity=0.367  Sum_probs=55.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE---------ECCHHHHHHHHHHHCC---c-ccchhccc---cc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA---------NRTYDRARELAETVGG---H-ALSLADLE---NF--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~---------nRt~~ka~~la~~~~~---~-~~~~~~l~---~~--  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.         .|+.++++++++++..   . ..++.+..   .+  
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            3578999999998 699999999999999999996         4577888877766531   1 12322221   10  


Q ss_pred             ----CCCCccEEEEcCCCC
Q 007151          438 ----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ----~~~~~divInat~~g  452 (616)
                          .....|+|||+++..
T Consensus        85 ~~~~~~g~iD~lVnnAG~~  103 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGIL  103 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence                235689999999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.38  E-value=0.00036  Score=71.40  Aligned_cols=75  Identities=20%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEcc-ch--hHHHHHHHHHHCCCeEEEEECCHHHH---HHHHHHHCCc---ccchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GG--AGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGH---ALSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GG--agrAia~~L~~~G~~V~v~nRt~~ka---~~la~~~~~~---~~~~~~---l~~~------~~  439 (616)
                      .+++|+++|+|+ |+  +|++++..|++.|++|++++|+.+..   +++.+..+..   ..|+.+   +..+      ..
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999998 44  99999999999999999999996433   3344444421   123322   1111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       108 g~iD~lVnnAG~~  120 (293)
T 3grk_A          108 GKLDFLVHAIGFS  120 (293)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            5689999999865

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.38  E-value=0.0001  Score=72.95  Aligned_cols=74  Identities=27%  Similarity=0.298  Sum_probs=54.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHH---CCcc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETV---GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~---~~~~----~~~~~---l~~~------~~  439 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+ .++.+++.+++   +...    .|+.+   +.++      ..
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999998 799999999999999999999998 77777776655   2211    23322   1110      12


Q ss_pred             CCccEEEEcCCC
Q 007151          440 EDGMILANTTSI  451 (616)
Q Consensus       440 ~~~divInat~~  451 (616)
                      ...|+|||+++.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            368999999986

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.38  E-value=0.00029  Score=70.15  Aligned_cols=72  Identities=25%  Similarity=0.272  Sum_probs=51.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh-ccccc--CCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA-DLENF--NPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~-~l~~~--~~~~~divInat~  450 (616)
                      ..+++|+++|+|+ ||+|++++..|++.|++|++++|+.+..+++    +...  .|+. ++..+  .....|+|||+++
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh----CCeEEEeeHHHHHHHHHHHhcCCCEEEECCC
Confidence            4688999999998 7999999999999999999999998554433    2111  2221 11111  1236899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        91 ~~   92 (249)
T 1o5i_A           91 GP   92 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.38  E-value=0.00027  Score=74.37  Aligned_cols=76  Identities=36%  Similarity=0.403  Sum_probs=53.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH-------HHHHHHHH---CCcc----cchhcc---ccc-
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR-------ARELAETV---GGHA----LSLADL---ENF-  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k-------a~~la~~~---~~~~----~~~~~l---~~~-  437 (616)
                      ..++||+++|+|+ ||+|++++..|++.|++|++++|+.++       .+++++++   +...    +|+.+.   .++ 
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4688999999998 799999999999999999999998763       33333333   3221    233221   111 


Q ss_pred             -----CCCCccEEEEcCCCC
Q 007151          438 -----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -----~~~~~divInat~~g  452 (616)
                           .....|+|||+++..
T Consensus       121 ~~~~~~~g~iDilVnnAG~~  140 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAI  140 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence                 124689999999875

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.37  E-value=0.00017  Score=76.35  Aligned_cols=114  Identities=16%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .++++++.|||.|-+|.+++..|.+.|.+|+++||+.++++++.+. +... .+.+++.. ....+|+||.++|.+ .  
T Consensus        19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g~~~~~s~~e~~~-~a~~~DvVi~~vp~~-~--   93 (358)
T 4e21_A           19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-GIAGARSIEEFCA-KLVKPRVVWLMVPAA-V--   93 (358)
T ss_dssp             ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCBCCSSHHHHHH-HSCSSCEEEECSCGG-G--
T ss_pred             hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCEEeCCHHHHHh-cCCCCCEEEEeCCHH-H--
Confidence            3456899999999999999999999999999999999998888754 2222 13333222 123359999999865 1  


Q ss_pred             CCCCccc--cccccCccEEEEEeeCCcc-c-HHHHHHHHcCCeEE
Q 007151          457 VDETPIP--KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIV  497 (616)
Q Consensus       457 ~~~~pi~--~~~l~~~~~v~Di~Y~P~~-T-~ll~~A~~~G~~~i  497 (616)
                      .+.. +.  ...++++.+++|..-.+.. + .+.+..+++|+..+
T Consensus        94 v~~v-l~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~v  137 (358)
T 4e21_A           94 VDSM-LQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYV  137 (358)
T ss_dssp             HHHH-HHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred             HHHH-HHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence            1110 11  1235677899999876533 2 23334456677654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.37  E-value=0.0002  Score=74.00  Aligned_cols=110  Identities=17%  Similarity=0.202  Sum_probs=74.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      |+|-+||-|-||..++..|.+.|++|+++||++++++.+.+. +... -+..++    ....|+||-+.|-+-  ...+.
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~~a~s~~e~----~~~~dvv~~~l~~~~--~v~~V   76 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-GASAARSARDA----VQGADVVISMLPASQ--HVEGL   76 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCEECSSHHHH----HTTCSEEEECCSCHH--HHHHH
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHc-CCEEcCCHHHH----HhcCCceeecCCchH--HHHHH
Confidence            689999999999999999999999999999999999999765 3322 233333    235799998877431  11110


Q ss_pred             ccc----cccccCccEEEEEeeCCc-ccH-HHHHHHHcCCeEEc
Q 007151          461 PIP----KHALGHYALVFDAVYTPK-ITR-LLREAEESGATIVS  498 (616)
Q Consensus       461 pi~----~~~l~~~~~v~Di~Y~P~-~T~-ll~~A~~~G~~~i~  498 (616)
                      ...    ...+.++.+++|+.-... .+. +-++++++|+..++
T Consensus        77 ~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lD  120 (300)
T 3obb_A           77 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD  120 (300)
T ss_dssp             HHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            011    123567789999998643 333 33445567887664

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.36  E-value=0.00028  Score=71.53  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=52.7

Q ss_pred             cCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHHHCC-cc--cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~~---ka~~la~~~~~-~~--~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+   ||+|++++..|++.|++|++++|+.+   ..+++.+..+. ..  .|+.+   +..+      ...
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67899999997   59999999999999999999999875   44445444332 11  23322   1110      234


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        99 ~iD~lv~~Ag~~  110 (285)
T 2p91_A           99 SLDIIVHSIAYA  110 (285)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.35  E-value=0.00017  Score=69.91  Aligned_cols=69  Identities=13%  Similarity=0.114  Sum_probs=50.6

Q ss_pred             cEEEEEcc-chhHHHHHHHHH-HCCCeEEEEECCHH-HHHHHHHHHCC-cc--cchhc---ccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAK-AKGARVVIANRTYD-RARELAETVGG-HA--LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~-~~G~~V~v~nRt~~-ka~~la~~~~~-~~--~~~~~---l~~~~~~~~divInat~~  451 (616)
                      |+++|+|| |++|++++..|. +.|++|+++.|+.+ ++++++..... ..  .++.+   +.+ ...+.|+|||+++.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vv~~ag~   83 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQ-AVTNAEVVFVGAME   83 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHH-HHTTCSEEEESCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHH-HHcCCCEEEEcCCC
Confidence            67999997 899999999999 89999999999998 87776522111 11  23322   222 23568999999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.35  E-value=0.00013  Score=75.81  Aligned_cols=112  Identities=20%  Similarity=0.192  Sum_probs=75.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ..+++.|+|+|.+|++++..|++.|.+|++++|++++++++++. +... .+.+++    ..++|+||-++|....  ..
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~~~~~~e~----~~~aDvVi~~vp~~~~--~~  102 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GATIHEQARAA----ARDADIVVSMLENGAV--VQ  102 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCEEESSHHHH----HTTCSEEEECCSSHHH--HH
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCEeeCCHHHH----HhcCCEEEEECCCHHH--HH
Confidence            45689999999999999999999999999999999999888765 3222 122222    2457999999985311  00


Q ss_pred             CCcc--c-cccccCccEEEEEeeCCcc-cH-HHHHHHHcCCeEEc
Q 007151          459 ETPI--P-KHALGHYALVFDAVYTPKI-TR-LLREAEESGATIVS  498 (616)
Q Consensus       459 ~~pi--~-~~~l~~~~~v~Di~Y~P~~-T~-ll~~A~~~G~~~i~  498 (616)
                      ....  . ...+.++.+++|+...+.. +. +.+..+++|..+++
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~  147 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD  147 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            0000  0 1135677899999876544 32 33444567877664

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.35  E-value=0.00021  Score=73.72  Aligned_cols=114  Identities=19%  Similarity=0.128  Sum_probs=76.6

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCC-CC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQ-PK  456 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~-p~  456 (616)
                      ...+++.|||.|.+|++++..|.+.|.+|+++||+.++++++++. +... .+..++    ..++|+||-++|.... ..
T Consensus         7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~e~----~~~aDvVi~~vp~~~~~~~   81 (306)
T 3l6d_A            7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GAHLCESVKAA----LSASPATIFVLLDNHATHE   81 (306)
T ss_dssp             CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TCEECSSHHHH----HHHSSEEEECCSSHHHHHH
T ss_pred             cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeecCCHHHH----HhcCCEEEEEeCCHHHHHH
Confidence            345789999999999999999999999999999999999998765 3322 123222    2347999999985421 00


Q ss_pred             -CCCCccccccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEcc
Q 007151          457 -VDETPIPKHALGHYALVFDAVYTPKIT--RLLREAEESGATIVSG  499 (616)
Q Consensus       457 -~~~~pi~~~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~G  499 (616)
                       .....+  ..+.++.+++|+.-.+..+  .+.+..++.|+.++++
T Consensus        82 v~~~~~l--~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda  125 (306)
T 3l6d_A           82 VLGMPGV--ARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG  125 (306)
T ss_dssp             HHTSTTH--HHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             Hhcccch--hhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec
Confidence             000011  1235678999998765443  3334456678877664

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.34  E-value=0.00017  Score=72.12  Aligned_cols=76  Identities=21%  Similarity=0.354  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHH---CCcc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYDRARELAETV---GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~---~~~~----~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.| +.++.+++.+++   +...    .|+.+   +..+      .
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999998 79999999999999999999999 888887776655   2221    23322   1110      1


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        97 ~~~~d~vi~~Ag~~  110 (274)
T 1ja9_A           97 FGGLDFVMSNSGME  110 (274)
T ss_dssp             HSCEEEEECCCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            23689999999864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.33  E-value=0.00024  Score=71.05  Aligned_cols=75  Identities=27%  Similarity=0.354  Sum_probs=53.2

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHHHCC-cc--cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTYD---RARELAETVGG-HA--LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~~---ka~~la~~~~~-~~--~~~~~---l~~~------~~  439 (616)
                      .+++|+++|+|+   ||+|++++..|++.|++|++++|+.+   ..+++.+..+. ..  .|+.+   +..+      ..
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            567899999997   69999999999999999999999875   44555554432 11  23322   1110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus        85 g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           85 GGLDYLVHAIAFA   97 (261)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.33  E-value=0.0004  Score=69.43  Aligned_cols=75  Identities=28%  Similarity=0.358  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCH-----HHHHHHHHHHCCcc----cchhcc---ccc-----
Q 007151          378 ALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY-----DRARELAETVGGHA----LSLADL---ENF-----  437 (616)
Q Consensus       378 ~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~-----~ka~~la~~~~~~~----~~~~~l---~~~-----  437 (616)
                      ++++|+++|+|++   |+|++++..|++.|++|+++.|+.     +..+++.+..+...    .|+.+.   .++     
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            5789999999975   999999999999999999988864     33344444444322    233221   110     


Q ss_pred             -CCCCccEEEEcCCCC
Q 007151          438 -NPEDGMILANTTSIG  452 (616)
Q Consensus       438 -~~~~~divInat~~g  452 (616)
                       .....|+|||+++..
T Consensus        97 ~~~g~id~li~nAg~~  112 (267)
T 3gdg_A           97 ADFGQIDAFIANAGAT  112 (267)
T ss_dssp             HHTSCCSEEEECCCCC
T ss_pred             HHcCCCCEEEECCCcC
Confidence             235689999999865

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.33  E-value=0.00039  Score=69.38  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=54.1

Q ss_pred             cccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCC-cc--cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGG-HA--LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~-~~--~~~~~---l~~~------~  438 (616)
                      .++++|+++|+|+   ||+|++++..|++.|++|++++|+.   +..+++.++.+. ..  .|+.+   +..+      .
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999996   5999999999999999999998873   344455555442 11  23322   1110      2


Q ss_pred             CCCccEEEEcCCCCC
Q 007151          439 PEDGMILANTTSIGM  453 (616)
Q Consensus       439 ~~~~divInat~~gm  453 (616)
                      ....|+|||+++...
T Consensus        90 ~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAP  104 (271)
T ss_dssp             CSCEEEEEECCCCCC
T ss_pred             cCCCCEEEECCccCc
Confidence            356899999998653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.00025  Score=76.09  Aligned_cols=96  Identities=20%  Similarity=0.237  Sum_probs=66.9

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch---------------------------
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL---------------------------  431 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~---------------------------  431 (616)
                      +.+.+|+|+|+|.+|..++..+...|++|++++|+.++.+.+.+ ++...+.+                           
T Consensus       188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCEECCCCC-----------------CHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            56789999999999999999999999999999999988776654 55533221                           


Q ss_pred             hcccccCCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEee
Q 007151          432 ADLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVY  478 (616)
Q Consensus       432 ~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y  478 (616)
                      +.+.+ ...++|+||+|+...-.+  ....+..+   ..+++.+++|+.-
T Consensus       267 ~~l~e-~l~~aDVVI~tvlipg~~--ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          267 ALVAE-HIAKQDIVITTALIPGRP--APRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHH-HHHTCSEEEECCCCSSSC--CCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             hHHHH-HhcCCCEEEECCcCCCCC--CCEEecHHHHhcCCCCCEEEEEeC
Confidence            01222 235689999987432111  11124433   3568899999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.31  E-value=0.00033  Score=69.04  Aligned_cols=69  Identities=25%  Similarity=0.377  Sum_probs=49.6

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc--cccc------CCCCccEEEEcC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD--LENF------NPEDGMILANTT  449 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~--l~~~------~~~~~divInat  449 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.++   ++++++...  .|+.+  +.++      .....|++||++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999998 799999999999999999999998776   334444221  23322  1110      124689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        79 g~~   81 (239)
T 2ekp_A           79 AVN   81 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.30  E-value=0.00047  Score=72.01  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=58.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHCCc---c--cchhc---ccccCCCCccEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAK-GA-RVVIANRTYDRARELAETVGGH---A--LSLAD---LENFNPEDGMIL  445 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~-G~-~V~v~nRt~~ka~~la~~~~~~---~--~~~~~---l~~~~~~~~div  445 (616)
                      ..+++|+++|+|+ |++|++++..|.+. |+ +|++++|+.++.+++.+.+...   .  .++.+   +.+ ...+.|+|
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~D~V   95 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY-ALEGVDIC   95 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH-HTTTCSEE
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH-HHhcCCEE
Confidence            3477899999997 89999999999999 98 9999999999988888776421   1  23322   222 24568999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        96 ih~Aa~~  102 (344)
T 2gn4_A           96 IHAAALK  102 (344)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999865

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.30  E-value=0.00016  Score=72.00  Aligned_cols=72  Identities=28%  Similarity=0.332  Sum_probs=50.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~~  441 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+  +++++++   +...    .|+.+   +..+      ....
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998 79999999999999999999999765  3333333   2211    23322   1110      1236


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        80 id~lv~~Ag~~   90 (255)
T 2q2v_A           80 VDILVNNAGIQ   90 (255)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.30  E-value=0.00032  Score=69.70  Aligned_cols=73  Identities=21%  Similarity=0.223  Sum_probs=51.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCe-EEEEECCH--HHHHHHHHHHCC-cc----cchhcc-c---cc------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGAR-VVIANRTY--DRARELAETVGG-HA----LSLADL-E---NF------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~-V~v~nRt~--~ka~~la~~~~~-~~----~~~~~l-~---~~------~~  439 (616)
                      +++|+++|+|+ ||+|++++..|++.|++ |++++|+.  +..+++.+.... ..    .|+.+. +   ++      ..
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            56899999998 79999999999999995 99999975  455666554321 11    233222 1   10      12


Q ss_pred             CCccEEEEcCCC
Q 007151          440 EDGMILANTTSI  451 (616)
Q Consensus       440 ~~~divInat~~  451 (616)
                      ...|+|||+++.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            368999999986

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.29  E-value=0.00021  Score=70.32  Aligned_cols=74  Identities=30%  Similarity=0.369  Sum_probs=50.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETV---GGHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~  440 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|+++ .|+.++.+++.+++   +...    .++.+   +..+      ...
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46899999998 799999999999999999988 67777777666554   2221    23322   1110      123


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        83 ~~d~vi~~Ag~~   94 (247)
T 2hq1_A           83 RIDILVNNAGIT   94 (247)
T ss_dssp             CCCEEEECC---
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=97.29  E-value=0.00034  Score=72.64  Aligned_cols=116  Identities=18%  Similarity=0.232  Sum_probs=79.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.  .+.+.+....+++++    ..++|+|+.++|....  
T Consensus       138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~l~el----l~~aDvVvl~~P~~~~--  209 (313)
T 2ekl_A          138 LELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE--KAEKINAKAVSLEEL----LKNSDVISLHVTVSKD--  209 (313)
T ss_dssp             CCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHHTTCEECCHHHH----HHHCSEEEECCCCCTT--
T ss_pred             CCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh--HHHhcCceecCHHHH----HhhCCEEEEeccCChH--
Confidence            46789999999999999999999999999999999987764  245555443344332    2347999999996421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~  501 (616)
                      . ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++
T Consensus       210 t-~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lD  257 (313)
T 2ekl_A          210 A-KPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATD  257 (313)
T ss_dssp             S-CCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEES
T ss_pred             H-HHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEe
Confidence            1 1123222   3577889999988654 44445556566544333444

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.28  E-value=0.00032  Score=69.36  Aligned_cols=73  Identities=23%  Similarity=0.254  Sum_probs=48.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcc------ccc--CCCCccEEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADL------ENF--NPEDGMILAN  447 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l------~~~--~~~~~divIn  447 (616)
                      +++|+++|+|+ ||+|++++..|++ |++|++++|+.++.+++++..+...  .++.+.      .+.  .....|++||
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            56899999998 7999999999988 8899999999999888876211111  122111      010  2346899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        82 ~Ag~~   86 (245)
T 3e9n_A           82 AAAVA   86 (245)
T ss_dssp             CC---
T ss_pred             CCCcC
Confidence            99864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.28  E-value=6e-05  Score=75.56  Aligned_cols=72  Identities=18%  Similarity=0.232  Sum_probs=48.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divI  446 (616)
                      .++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++    ......|+.+   +..+      .....|+||
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG----FLAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4677899999998 799999999999999999999998654322    1000112221   1110      234689999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        93 ~nAg~~   98 (253)
T 2nm0_A           93 ANAGVT   98 (253)
T ss_dssp             EECSCC
T ss_pred             ECCCCC
Confidence            999865

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.28  E-value=0.00015  Score=69.71  Aligned_cols=68  Identities=22%  Similarity=0.249  Sum_probs=50.0

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~~~~~~divInat~~g  452 (616)
                      +++|+|| |++|++++..|.+.|++|+++.|+.++.+.+.  -+...  .++.+...-...+.|+|||+++..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence            6999997 89999999999999999999999988877654  12221  233322111245689999999863

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=97.27  E-value=0.0005  Score=72.09  Aligned_cols=116  Identities=16%  Similarity=0.148  Sum_probs=77.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  .+...+....+++++    ..++|+|+.++|....  
T Consensus       161 ~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~l~el----l~~aDvV~l~~P~t~~--  232 (335)
T 2g76_A          161 TELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE--VSASFGVQQLPLEEI----WPLCDFITVHTPLLPS--  232 (335)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH--HHHHTTCEECCHHHH----GGGCSEEEECCCCCTT--
T ss_pred             cCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hhhhcCceeCCHHHH----HhcCCEEEEecCCCHH--
Confidence            46789999999999999999999999999999999986652  344555443344332    3458999999997521  


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~  501 (616)
                      + ...+..   ..++++.+++|+.-.+. ++.-+.+|-+.|...--|++
T Consensus       233 t-~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lD  280 (335)
T 2g76_A          233 T-TGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALD  280 (335)
T ss_dssp             T-TTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEES
T ss_pred             H-HHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEe
Confidence            1 112322   23577889999988654 44444555555543323344

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.27  E-value=0.00034  Score=68.65  Aligned_cols=72  Identities=28%  Similarity=0.428  Sum_probs=52.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCCCc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETV---GGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      ||+++|+|+ ||+|++++..|++.|++|++ .+|+.++.+++.+++   +...    .|+.+   +.++      .....
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999998 79999999999999999988 589998888776654   2221    23322   1110      13468


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||+++..
T Consensus        81 d~li~~Ag~~   90 (244)
T 1edo_A           81 DVVVNNAGIT   90 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999865

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.26  E-value=0.00035  Score=70.70  Aligned_cols=75  Identities=15%  Similarity=0.216  Sum_probs=54.6

Q ss_pred             ccCCcEEEEEcc---chhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHCCc-c--cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA---GGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGH-A--LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA---GGagrAia~~L~~~G~~V~v~nRt~--~ka~~la~~~~~~-~--~~~~~---l~~~------~~~  440 (616)
                      .+++|+++|+|+   +|+|++++..|++.|++|++++|+.  +..+++.+..+.. .  .|+.+   +.++      ...
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            578899999996   3699999999999999999999987  6666776655431 1  23322   1110      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       103 ~id~li~nAg~~  114 (280)
T 3nrc_A          103 GLDAIVHSIAFA  114 (280)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            689999999865

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=97.26  E-value=0.00053  Score=71.04  Aligned_cols=108  Identities=22%  Similarity=0.261  Sum_probs=74.5

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++  +.+.+.+....+++++    ..++|+|+.++|....  
T Consensus       138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~~l~el----l~~aDvV~l~~p~~~~--  209 (307)
T 1wwk_A          138 IELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE--ERAKEVNGKFVDLETL----LKESDVVTIHVPLVES--  209 (307)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHTTCEECCHHHH----HHHCSEEEECCCCSTT--
T ss_pred             cccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh--hhHhhcCccccCHHHH----HhhCCEEEEecCCChH--
Confidence            4678999999999999999999999999999999998766  2344555443344332    2357999999997421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                      . ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|
T Consensus       210 t-~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g  249 (307)
T 1wwk_A          210 T-YHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEG  249 (307)
T ss_dssp             T-TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             H-hhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence            1 1123322   3578899999988654 334344444444

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.25  E-value=0.00024  Score=69.68  Aligned_cols=72  Identities=22%  Similarity=0.272  Sum_probs=52.6

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc-----cchhc---cccc------CCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA-----LSLAD---LENF------NPED  441 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~-----~~~~~---l~~~------~~~~  441 (616)
                      +|+++|+|+ ||+|++++..|++.|++|+++ +|+.++.+++.+++.   ...     .++.+   +.++      ....
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            378999998 799999999999999999987 899998888776652   111     13222   1110      1246


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        81 ~d~li~~Ag~~   91 (245)
T 2ph3_A           81 LDTLVNNAGIT   91 (245)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.25  E-value=0.00032  Score=70.48  Aligned_cols=75  Identities=21%  Similarity=0.279  Sum_probs=52.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++.+ |+.++.+++.+...   ...    .|+.+.   .++      ..
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999998 7999999999999999999988 67777776665542   111    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       102 g~id~li~nAg~~  114 (269)
T 3gk3_A          102 GKVDVLINNAGIT  114 (269)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4689999999865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.25  E-value=0.00025  Score=71.36  Aligned_cols=74  Identities=20%  Similarity=0.214  Sum_probs=53.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~  440 (616)
                      .++|+++|+|+ ||+|++++..|++.|++|++. .|+.++++++.+.+.   ...    .|+.+   +.++      ..+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            35789999998 799999999999999998776 889888888876653   221    23322   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       104 ~id~li~nAg~~  115 (272)
T 4e3z_A          104 RLDGLVNNAGIV  115 (272)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999865

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=97.24  E-value=0.00072  Score=70.82  Aligned_cols=97  Identities=20%  Similarity=0.257  Sum_probs=68.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.++++.|+|.|.+|++++..|+..|.+|++++|+.++  +.+..++....+++++    ..++|+|+.++|..... 
T Consensus       146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~~l~~~----l~~aDvVil~vp~~~~t-  218 (334)
T 2dbq_A          146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE--EVERELNAEFKPLEDL----LRESDFVVLAVPLTRET-  218 (334)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHCCEECCHHHH----HHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch--hhHhhcCcccCCHHHH----HhhCCEEEECCCCChHH-
Confidence            4678999999999999999999999999999999998776  3344455433333332    23579999999975311 


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCcc
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPKI  482 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~~  482 (616)
                       . ..+..   ..++++.+++|+.-.+..
T Consensus       219 -~-~~i~~~~~~~mk~~ailIn~srg~~v  245 (334)
T 2dbq_A          219 -Y-HLINEERLKLMKKTAILINIARGKVV  245 (334)
T ss_dssp             -T-TCBCHHHHHHSCTTCEEEECSCGGGB
T ss_pred             -H-HhhCHHHHhcCCCCcEEEECCCCccc
Confidence             1 12322   235677888898866543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.23  E-value=3.8e-05  Score=77.60  Aligned_cols=71  Identities=27%  Similarity=0.368  Sum_probs=49.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divIn  447 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++.. .+   ..++.+   +..+      .....|+|||
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~---~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL---PGDLREAAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC---CCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc---CcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            578999999998 69999999999999999999999865432220 00   112211   1100      1246899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus       101 nAg~~  105 (266)
T 3uxy_A          101 NAGVI  105 (266)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.22  E-value=0.00029  Score=70.73  Aligned_cols=75  Identities=20%  Similarity=0.275  Sum_probs=53.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHC---Ccc----cchhcc---ccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVG---GHA----LSLADL---ENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~~---~~~----~~~~~l---~~~------~~  439 (616)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++ ..|+.+++++.++++.   ...    .|+.+.   .++      ..
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            567899999998 79999999999999998865 6688888888776652   111    233221   110      12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++..
T Consensus       103 g~id~li~nAg~~  115 (267)
T 4iiu_A          103 GAWYGVVSNAGIA  115 (267)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCccEEEECCCCC
Confidence            4689999999865

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.22  E-value=0.00046  Score=68.97  Aligned_cols=75  Identities=20%  Similarity=0.222  Sum_probs=51.4

Q ss_pred             ccCCcEEEEEcc-ch--hHHHHHHHHHHCCCeEEEEECCHHHH---HHHHHHHCC-cc----cchhcc---ccc------
Q 007151          378 ALAGKLFVVIGA-GG--AGKALAYGAKAKGARVVIANRTYDRA---RELAETVGG-HA----LSLADL---ENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GG--agrAia~~L~~~G~~V~v~nRt~~ka---~~la~~~~~-~~----~~~~~l---~~~------  437 (616)
                      ++++|+++|+|+ |+  +|++++..|++.|++|+++.|+....   +++.++++. ..    .|+.+.   .++      
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            578999999998 44  99999999999999999999986433   333333332 11    233221   110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        84 ~~g~id~li~~Ag~~   98 (266)
T 3oig_A           84 QVGVIHGIAHCIAFA   98 (266)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCeeEEEEccccc
Confidence            124689999999865

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.22  E-value=0.0011  Score=71.43  Aligned_cols=69  Identities=25%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+.||+++|+|.|.+|++++..|...|++|++++|++.++... ...+....+++++    ...+|++|.|++
T Consensus       216 ~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-~~~G~~v~~Leea----l~~ADIVi~atg  284 (435)
T 3gvp_A          216 MMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-CMDGFRLVKLNEV----IRQVDIVITCTG  284 (435)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEECCHHHH----TTTCSEEEECSS
T ss_pred             ceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-HHcCCEeccHHHH----HhcCCEEEECCC
Confidence            46789999999999999999999999999999999998776543 3334333444332    345788887644

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.22  E-value=5e-05  Score=75.55  Aligned_cols=72  Identities=19%  Similarity=0.356  Sum_probs=50.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILA  446 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divI  446 (616)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.   + ...|+.+   +.++      .....|+||
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~-~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G-VEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E-EECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C-eeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999998 79999999999999999999999866543321   0 1112221   1110      124579999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        87 ~~Ag~~   92 (247)
T 1uzm_A           87 SNAGLS   92 (247)
T ss_dssp             EECSCC
T ss_pred             ECCCCC
Confidence            999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.20  E-value=0.00016  Score=72.06  Aligned_cols=71  Identities=13%  Similarity=0.091  Sum_probs=50.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--HHCCccc--chhccccc------CCCCccEEEEcCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVGGHAL--SLADLENF------NPEDGMILANTTS  450 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~--~~~~~~~--~~~~l~~~------~~~~~divInat~  450 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+++++  ..+....  +.+++.++      .....|+|||+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            57999998 799999999999999999999999877766654  1122221  22222110      1246899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        82 ~~   83 (254)
T 1zmt_A           82 FA   83 (254)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.20  E-value=0.00019  Score=66.20  Aligned_cols=75  Identities=20%  Similarity=0.268  Sum_probs=52.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--ch---hcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~---~~l~~~~~~~~divInat~~  451 (616)
                      ....+++++|+|+|.+|+.++..|.+.|++|++++|+.++++.+.+..+...+  +.   +.+......++|+||.+++.
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND   94 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence            34567899999999999999999999999999999998887665422332221  11   11222123468999998874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.19  E-value=0.00026  Score=69.25  Aligned_cols=72  Identities=15%  Similarity=0.019  Sum_probs=50.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHCCcccchhc---ccccCCCCccEEEEcCCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHALSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~--G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      .+++++|+|+ |++|++++..|.+.  |++|+++.|+.++.+++.........++.+   +.+ ...+.|+|||+++..
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP-AFQGIDALVILTSAV   80 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH-HHTTCSEEEECCCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHH-HHcCCCEEEEecccc
Confidence            4689999997 89999999999999  789999999988766541110001123322   222 234689999999864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.19  E-value=0.00019  Score=71.37  Aligned_cols=76  Identities=21%  Similarity=0.257  Sum_probs=50.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHH---CCcc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETV---GGHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~---~~~~----~~~~~---l~~~------~  438 (616)
                      ...++|++||+|+ ||+|++++..|++.|++|++.. |+.++.+++.+++   +...    .++.+   +.++      .
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            3567899999998 7999999999999999988876 6666555555443   2221    23222   1110      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        89 ~g~id~lv~~Ag~~  102 (256)
T 3ezl_A           89 VGEIDVLVNNAGIT  102 (256)
T ss_dssp             TCCEEEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence            35689999999865

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.18  E-value=0.0003  Score=68.00  Aligned_cols=91  Identities=19%  Similarity=0.213  Sum_probs=60.8

Q ss_pred             EEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----CcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          383 LFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       383 ~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      +++|+| +|.+|++++..|.+.|.+|++++|+.++++++.+.++     ... ...++.+ ...++|+||++++......
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~D~Vi~~~~~~~~~~   79 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI-TGMKNED-AAEACDIAVLTIPWEHAID   79 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCE-EEEEHHH-HHHHCSEEEECSCHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCC-ChhhHHH-HHhcCCEEEEeCChhhHHH
Confidence            689999 8999999999999999999999999999988877653     111 1122222 1235799999998543210


Q ss_pred             CCCCccccccccCccEEEEEee
Q 007151          457 VDETPIPKHALGHYALVFDAVY  478 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y  478 (616)
                      .- ..+. ..+ +..+++|+.-
T Consensus        80 ~~-~~l~-~~~-~~~~vi~~~~   98 (212)
T 1jay_A           80 TA-RDLK-NIL-REKIVVSPLV   98 (212)
T ss_dssp             HH-HHTH-HHH-TTSEEEECCC
T ss_pred             HH-HHHH-HHc-CCCEEEEcCC
Confidence            00 0011 123 3678888874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.18  E-value=0.00019  Score=71.62  Aligned_cols=76  Identities=16%  Similarity=0.243  Sum_probs=50.7

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHH--CCcc----cchhccc---cc------
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKG---ARVVIANRTYDRARELAETV--GGHA----LSLADLE---NF------  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G---~~V~v~nRt~~ka~~la~~~--~~~~----~~~~~l~---~~------  437 (616)
                      .++++|+++|+|+ ||+|++++..|++.|   ++|++++|+.++.+.+.+..  +...    .++.+.+   ++      
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            4678999999998 799999999999999   89999999876554442211  2111    2332221   11      


Q ss_pred             CCC--CccEEEEcCCCC
Q 007151          438 NPE--DGMILANTTSIG  452 (616)
Q Consensus       438 ~~~--~~divInat~~g  452 (616)
                      ...  ..|+|||+++..
T Consensus        97 ~~g~~~id~li~~Ag~~  113 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIA  113 (267)
T ss_dssp             HHGGGCCSEEEECCCCC
T ss_pred             hcCCCCccEEEECCCcC
Confidence            011  589999999864

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.17  E-value=0.00023  Score=70.95  Aligned_cols=95  Identities=18%  Similarity=0.183  Sum_probs=61.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHH--------------HHHHHHHHCCcc-cchhcccccCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR--------------ARELAETVGGHA-LSLADLENFNPED  441 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~k--------------a~~la~~~~~~~-~~~~~l~~~~~~~  441 (616)
                      ..+.++++.|+|+|.+|.+++..|++.|.+|++++|+.++              ++++++.++... .+..+.    ..+
T Consensus        15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~   90 (245)
T 3dtt_A           15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADV----AAG   90 (245)
T ss_dssp             ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHH----HHH
T ss_pred             cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHH----Hhc
Confidence            3567899999999999999999999999999999999988              445544433211 122221    234


Q ss_pred             ccEEEEcCCCCCCCCCCCCccccccccCccEEEEEe
Q 007151          442 GMILANTTSIGMQPKVDETPIPKHALGHYALVFDAV  477 (616)
Q Consensus       442 ~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~  477 (616)
                      +|+||.++|....... ...+....+ ++.+++|+.
T Consensus        91 aDvVilavp~~~~~~~-~~~i~~~~l-~g~ivi~~s  124 (245)
T 3dtt_A           91 AELVVNATEGASSIAA-LTAAGAENL-AGKILVDIA  124 (245)
T ss_dssp             CSEEEECSCGGGHHHH-HHHHCHHHH-TTSEEEECC
T ss_pred             CCEEEEccCcHHHHHH-HHHhhhhhc-CCCEEEECC
Confidence            7999999986422110 000101123 567899998

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.17  E-value=0.00018  Score=72.38  Aligned_cols=71  Identities=18%  Similarity=0.288  Sum_probs=50.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEEC----------CH---------HHHHHHHHHHCC---c--c--c--
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR----------TY---------DRARELAETVGG---H--A--L--  429 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nR----------t~---------~ka~~la~~~~~---~--~--~--  429 (616)
                      +++++|+|+|+||+|.+++..|+..|+ +++|+++          +.         .|++.+++.+..   .  .  .  
T Consensus        26 l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           26 LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             HhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            567899999999999999999999999 9999954          32         688888776632   1  1  0  


Q ss_pred             --chhcccccCCCCccEEEEcCC
Q 007151          430 --SLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       430 --~~~~l~~~~~~~~divInat~  450 (616)
                        +.+++.+ ...++|+||+|+.
T Consensus       106 ~~~~~~~~~-~~~~~DvVi~~~d  127 (251)
T 1zud_1          106 RLTGEALKD-AVARADVVLDCTD  127 (251)
T ss_dssp             CCCHHHHHH-HHHHCSEEEECCS
T ss_pred             cCCHHHHHH-HHhcCCEEEECCC
Confidence              1111111 1234799999886

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=97.16  E-value=0.00043  Score=73.39  Aligned_cols=117  Identities=18%  Similarity=0.168  Sum_probs=78.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+...  +.+...+....+++++    ..++|+|+.++|..-.  
T Consensus       172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~~l~el----l~~aDvV~l~~Plt~~--  243 (365)
T 4hy3_A          172 RLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR--SMLEENGVEPASLEDV----LTKSDFIFVVAAVTSE--  243 (365)
T ss_dssp             CCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH--HHHHHTTCEECCHHHH----HHSCSEEEECSCSSCC--
T ss_pred             cccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH--HHHhhcCeeeCCHHHH----HhcCCEEEEcCcCCHH--
Confidence            4688999999999999999999999999999999998432  2233344443344443    3458999999997521  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|... -|++++
T Consensus       244 T-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~  292 (365)
T 4hy3_A          244 N-KRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVY  292 (365)
T ss_dssp             ----CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCC
T ss_pred             H-HhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCC
Confidence            1 1123332   3577889999886544 455555565655433 466654

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=97.16  E-value=0.00059  Score=71.08  Aligned_cols=117  Identities=18%  Similarity=0.148  Sum_probs=77.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR-TYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nR-t~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++| +.++.  .+.+++.... +++++    ..++|+|+.++|....
T Consensus       142 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~~g~~~~~~l~el----l~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          142 EKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS--DEASYQATFHDSLDSL----LSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH--HHHHHTCEECSSHHHH----HHHCSEEEECCCCCTT
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh--hhhhcCcEEcCCHHHH----HhhCCEEEEeccCchH
Confidence            467899999999999999999999999999999999 77652  3445555433 33332    2357999999997421


Q ss_pred             CCCCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          455 PKVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       455 p~~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                        .. ..+..   ..++++.+++|+.-.+. ++.-+.+|-+.|...--|+++
T Consensus       216 --t~-~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv  264 (320)
T 1gdh_A          216 --TR-YFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDV  264 (320)
T ss_dssp             --TT-TCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred             --HH-hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeC
Confidence              11 12322   24577889999987644 344445554545433334443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=97.15  E-value=0.00031  Score=74.21  Aligned_cols=118  Identities=19%  Similarity=0.182  Sum_probs=82.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|+.++|+....+. +.+.+.... +++++    ..++|+|+.++|..-  
T Consensus       160 ~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~~~~l~el----l~~aDvV~l~~Plt~--  232 (351)
T 3jtm_A          160 YDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL-EKETGAKFVEDLNEM----LPKCDVIVINMPLTE--  232 (351)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH-HHHHCCEECSCHHHH----GGGCSEEEECSCCCT--
T ss_pred             ccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH-HHhCCCeEcCCHHHH----HhcCCEEEECCCCCH--
Confidence            4688999999999999999999999999999999997543332 334454333 34332    345899999999742  


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      .+ ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|+++
T Consensus       233 ~t-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV  282 (351)
T 3jtm_A          233 KT-RGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDV  282 (351)
T ss_dssp             TT-TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred             HH-HHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCC
Confidence            21 1124333   3578899999987654 566666676666655556665

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.15  E-value=0.00021  Score=71.99  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=53.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cchhc---cccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSLAD---LENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~~~---l~~~------~~~  440 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+   +...    .|+.+   +.++      ...
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            478899999998 79999999999999999999999876655554433   3221    23322   1110      123


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus       111 ~id~li~~Ag~~  122 (279)
T 3ctm_A          111 TIDVFVANAGVT  122 (279)
T ss_dssp             CCSEEEECGGGS
T ss_pred             CCCEEEECCccc
Confidence            589999999864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.15  E-value=0.00028  Score=71.80  Aligned_cols=109  Identities=21%  Similarity=0.205  Sum_probs=71.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++.|+|+|.+|++++..|.+.|++|++++|+.++++.+.+. +... .+.++.    ..++|+||.++|....  ....
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~~~----~~~aDvvi~~vp~~~~--~~~v   74 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-GAERAATPCEV----VESCPVTFAMLADPAA--AEEV   74 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEECSSHHHH----HHHCSEEEECCSSHHH--HHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCeecCCHHHH----HhcCCEEEEEcCCHHH--HHHH
Confidence            579999999999999999999999999999999998888764 3222 122222    2347999999984211  0000


Q ss_pred             cc--c--cccccCccEEEEEeeCCccc-H-HHHHHHHcCCeEE
Q 007151          461 PI--P--KHALGHYALVFDAVYTPKIT-R-LLREAEESGATIV  497 (616)
Q Consensus       461 pi--~--~~~l~~~~~v~Di~Y~P~~T-~-ll~~A~~~G~~~i  497 (616)
                      .+  .  ...+.++.+++|....+..+ . +.+..+++|...+
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~  117 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFL  117 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             HcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence            00  0  12356778999997654433 2 3334456677654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.15  E-value=0.00032  Score=79.28  Aligned_cols=75  Identities=23%  Similarity=0.337  Sum_probs=53.1

Q ss_pred             ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCH---------HHHHHHHHHHC---Ccc-cchhcc---ccc---
Q 007151          378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY---------DRARELAETVG---GHA-LSLADL---ENF---  437 (616)
Q Consensus       378 ~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~---------~ka~~la~~~~---~~~-~~~~~l---~~~---  437 (616)
                      ++++|.++|+|+| |+|++++..|++.|++|++.+|+.         ++++++++++.   ... .+..+.   ..+   
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET   84 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence            5788999999985 999999999999999999998765         66676666652   221 122221   110   


Q ss_pred             ---CCCCccEEEEcCCCC
Q 007151          438 ---NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ---~~~~~divInat~~g  452 (616)
                         ..+..|++||+++..
T Consensus        85 ~~~~~G~iDiLVnNAGi~  102 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGIL  102 (604)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence               235689999999875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.15  E-value=0.00055  Score=67.73  Aligned_cols=47  Identities=34%  Similarity=0.442  Sum_probs=40.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVI-ANRTYDRARELAETV  424 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~  424 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++ ..|+.++++++.+++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~   52 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   52 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHH
Confidence            467899999998 69999999999999998877 578888887777665

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.14  E-value=0.00078  Score=63.56  Aligned_cols=73  Identities=11%  Similarity=0.109  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCccc--chh---ccccc-CCCCccEEEEcCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHAL--SLA---DLENF-NPEDGMILANTTS  450 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~~--~~~---~l~~~-~~~~~divInat~  450 (616)
                      ++.+++++|+|+|.+|+.++..|.+. |++|++++|++++.+.+.+ .+...+  +..   .+.+. ...++|+||.+++
T Consensus        36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            45677899999999999999999999 9999999999999887654 343322  221   22332 2467899999887


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       115 ~  115 (183)
T 3c85_A          115 H  115 (183)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=97.14  E-value=0.00099  Score=70.33  Aligned_cols=96  Identities=21%  Similarity=0.199  Sum_probs=66.2

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+...  +.+...+.... +++++    ..++|+|+.++|...  
T Consensus       156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~~~l~el----l~~aDiV~l~~Plt~--  227 (352)
T 3gg9_A          156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK--ERARADGFAVAESKDAL----FEQSDVLSVHLRLND--  227 (352)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH--HHHHHTTCEECSSHHHH----HHHCSEEEECCCCST--
T ss_pred             ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH--HHHHhcCceEeCCHHHH----HhhCCEEEEeccCcH--
Confidence            4688999999999999999999999999999999998633  23334444333 44433    234799999998642  


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK  481 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~  481 (616)
                      .+. ..+...   .++++.+++|+.-.+.
T Consensus       228 ~t~-~li~~~~l~~mk~gailIN~aRg~~  255 (352)
T 3gg9_A          228 ETR-SIITVADLTRMKPTALFVNTSRAEL  255 (352)
T ss_dssp             TTT-TCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred             HHH-HhhCHHHHhhCCCCcEEEECCCchh
Confidence            111 123322   3467778888876543

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=97.14  E-value=0.00039  Score=73.26  Aligned_cols=117  Identities=21%  Similarity=0.203  Sum_probs=80.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+..+.+...   +.... +++++    ..++|+|+.++|.... 
T Consensus       169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---g~~~~~~l~el----l~~sDvV~l~~Plt~~-  240 (345)
T 4g2n_A          169 MGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE---GAIYHDTLDSL----LGASDIFLIAAPGRPE-  240 (345)
T ss_dssp             CCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT---TCEECSSHHHH----HHTCSEEEECSCCCGG-
T ss_pred             cccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc---CCeEeCCHHHH----HhhCCEEEEecCCCHH-
Confidence            568899999999999999999999999999999999854322211   33332 34333    3458999999997421 


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++
T Consensus       241 -T-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf  290 (345)
T 4g2n_A          241 -L-KGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVF  290 (345)
T ss_dssp             -G-TTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             -H-HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCC
Confidence             1 1124333   3578889999987654 4666666777776555566654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.14  E-value=0.00022  Score=80.71  Aligned_cols=76  Identities=22%  Similarity=0.268  Sum_probs=48.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC---------CHHHHHHHHHHHCC---c-ccchhccc---cc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---------TYDRARELAETVGG---H-ALSLADLE---NF--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR---------t~~ka~~la~~~~~---~-~~~~~~l~---~~--  437 (616)
                      .+++||+++|+|+ ||+|+++|..|++.|++|++++|         +.++++++++++..   . ..++.+..   ++  
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHH
Confidence            5789999999998 69999999999999999999987         66777777766531   1 12222211   10  


Q ss_pred             ----CCCCccEEEEcCCCC
Q 007151          438 ----NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ----~~~~~divInat~~g  452 (616)
                          .....|+|||+++..
T Consensus        95 ~~~~~~g~iDiLVnnAGi~  113 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGIL  113 (613)
T ss_dssp             ----------CEECCCCCC
T ss_pred             HHHHHCCCCcEEEECCCCC
Confidence                234689999999875

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.12  E-value=0.00015  Score=74.67  Aligned_cols=110  Identities=20%  Similarity=0.221  Sum_probs=66.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      +||-+||-|-||..++..|.+.|++|+++||++++++++++. +....  ++..+ .....|+||-+.|.+...  .. -
T Consensus         6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~--~s~~e-~~~~~dvvi~~l~~~~~~--~~-v   78 (297)
T 4gbj_A            6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GATVV--ENAID-AITPGGIVFSVLADDAAV--EE-L   78 (297)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTT-TCEEC--SSGGG-GCCTTCEEEECCSSHHHH--HH-H
T ss_pred             CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CCeEe--CCHHH-HHhcCCceeeeccchhhH--HH-H
Confidence            579999999999999999999999999999999998877543 22221  22222 234579999887743110  00 0


Q ss_pred             ccc---ccccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEEc
Q 007151          462 IPK---HALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  498 (616)
Q Consensus       462 i~~---~~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i~  498 (616)
                      +..   ..+.++.+++|..-... .| .+-+.++++|+.+++
T Consensus        79 ~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld  120 (297)
T 4gbj_A           79 FSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG  120 (297)
T ss_dssp             SCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence            111   13467789999987544 33 233455677877664

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=97.12  E-value=0.00032  Score=73.41  Aligned_cols=120  Identities=13%  Similarity=0.096  Sum_probs=81.5

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|+.++|+..+.+ .+..++....+++++    ..++|+|+.++|..-  .
T Consensus       141 ~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~l~el----l~~aDvV~l~~P~t~--~  213 (330)
T 4e5n_A          141 TGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ-TEQRLGLRQVACSEL----FASSDFILLALPLNA--D  213 (330)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH-HHHHHTEEECCHHHH----HHHCSEEEECCCCST--T
T ss_pred             CccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh-HHHhcCceeCCHHHH----HhhCCEEEEcCCCCH--H
Confidence            467899999999999999999999999999999999863322 233444333344433    234799999999642  1


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++-
T Consensus       214 t-~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~  264 (330)
T 4e5n_A          214 T-LHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFE  264 (330)
T ss_dssp             T-TTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCG
T ss_pred             H-HHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccc
Confidence            1 1224333   3577889999987644 45556666666654445666553

>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A

Probab=97.12  E-value=0.011  Score=63.98  Aligned_cols=131  Identities=19%  Similarity=0.166  Sum_probs=86.9

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nR----------t~~ka~~la~  422 (616)
                      +.|.+..++..++..       +.++++++|+|.|.|.+|+.++..|.+.|++|+ |.++          +.+...++.+
T Consensus       215 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~  287 (440)
T 3aog_A          215 GRGVFITAAAAAEKI-------GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQ  287 (440)
T ss_dssp             HHHHHHHHHHHHHHH-------TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-------CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence            578877777665431       247889999999999999999999999999766 7777          7788888877


Q ss_pred             HHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH-HHHHHHcCC
Q 007151          423 TVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREAEESGA  494 (616)
Q Consensus       423 ~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l-l~~A~~~G~  494 (616)
                      +.+.       ..++-+++   ...++|++|.|+.-+...   ....  ..+ ..++|++-.-.|- |+- -+.-+++|+
T Consensus       288 ~~g~i~~y~~a~~i~~~ei---~~~~~DIlvPcA~~n~i~---~~na--~~l-~ak~VvEgAN~p~-t~eA~~iL~~~GI  357 (440)
T 3aog_A          288 EFGGVRGYPKAEPLPAADF---WGLPVEFLVPAALEKQIT---EQNA--WRI-RARIVAEGANGPT-TPAADDILLEKGV  357 (440)
T ss_dssp             HTSSSTTCTTSEECCHHHH---TTCCCSEEEECSSSSCBC---TTTG--GGC-CCSEEECCSSSCB-CHHHHHHHHHHTC
T ss_pred             hcCCcccCCCceEcCchhh---hcCCCcEEEecCCcCccc---hhhH--HHc-CCcEEEecCcccc-CHHHHHHHHHCCC
Confidence            7542       11111222   123589999998754321   1111  123 4578888887774 432 222246799


Q ss_pred             eEEccHH
Q 007151          495 TIVSGLE  501 (616)
Q Consensus       495 ~~i~Gl~  501 (616)
                      .++++.-
T Consensus       358 ~~~PD~~  364 (440)
T 3aog_A          358 LVVPDVI  364 (440)
T ss_dssp             EEECHHH
T ss_pred             EEEChHH
Confidence            8885443

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.11  E-value=0.00079  Score=67.48  Aligned_cols=69  Identities=30%  Similarity=0.316  Sum_probs=52.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~-V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .+.++.|+|+|.+|++++..|.+.|++ |++++|+.++++++++.++....  .+..+ ...++|+||.++|.
T Consensus         9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~--~~~~~-~~~~~Dvvi~av~~   78 (266)
T 3d1l_A            9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT--TDLAE-VNPYAKLYIVSLKD   78 (266)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE--SCGGG-SCSCCSEEEECCCH
T ss_pred             CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee--CCHHH-HhcCCCEEEEecCH
Confidence            346899999999999999999999997 99999999999999887654321  12222 23356777777764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.11  E-value=0.00052  Score=67.87  Aligned_cols=76  Identities=16%  Similarity=0.149  Sum_probs=53.3

Q ss_pred             cccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          375 VSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       375 ~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ...+++|++|||+|+|.+|...+..|.+.|++|+|++++. +..++++++.+..... .+...-.+.++|+||-||+.
T Consensus        25 ifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~dL~~adLVIaAT~d  101 (223)
T 3dfz_A           25 VMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR-KKVGEEDLLNVFFIVVATND  101 (223)
T ss_dssp             EEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGGSSSCSEEEECCCC
T ss_pred             cEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhHhCCCCEEEECCCC
Confidence            4468999999999999999999999999999999999865 3455666543222211 00111024568899988764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.00059  Score=70.96  Aligned_cols=75  Identities=17%  Similarity=0.232  Sum_probs=51.3

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHHH---CCcc----cchhc---cccc-----
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-----YDRARELAETV---GGHA----LSLAD---LENF-----  437 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-----~~ka~~la~~~---~~~~----~~~~~---l~~~-----  437 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|++..|+     .++++++++.+   +...    .|+.+   +.++     
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            45789999998 799999999999999999987765     56666665543   2221    23322   1110     


Q ss_pred             -CCCCccEEEEcCCCCC
Q 007151          438 -NPEDGMILANTTSIGM  453 (616)
Q Consensus       438 -~~~~~divInat~~gm  453 (616)
                       ..+..|+|||+++.+.
T Consensus        83 ~~~g~iD~lVnnAG~~~   99 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMV   99 (324)
T ss_dssp             HHHSCCSEEEECCCCCB
T ss_pred             HHcCCCCEEEECCCcCC
Confidence             1246899999998753

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.09  E-value=0.00044  Score=67.61  Aligned_cols=92  Identities=14%  Similarity=0.151  Sum_probs=62.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      ..+++.|+|+|.+|++++..|.+.|.+|++++|+.++++++.+. +....   +..+ ...++|+||.+++......  .
T Consensus        27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~---~~~~-~~~~~DvVi~av~~~~~~~--v   99 (215)
T 2vns_A           27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVT---FQEE-AVSSPEVIFVAVFREHYSS--L   99 (215)
T ss_dssp             --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEEE---EHHH-HTTSCSEEEECSCGGGSGG--G
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcee---cHHH-HHhCCCEEEECCChHHHHH--H
Confidence            34689999999999999999999999999999999988776543 22222   2222 2356899999998543211  0


Q ss_pred             CccccccccCccEEEEEeeCC
Q 007151          460 TPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      ..+ ...+ +..+++|+...-
T Consensus       100 ~~l-~~~~-~~~~vv~~s~g~  118 (215)
T 2vns_A          100 CSL-SDQL-AGKILVDVSNPT  118 (215)
T ss_dssp             GGG-HHHH-TTCEEEECCCCC
T ss_pred             HHH-HHhc-CCCEEEEeCCCc
Confidence            111 1123 567899998653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.09  E-value=0.00053  Score=68.35  Aligned_cols=74  Identities=16%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHCC---cc----cchhc---cccc------CCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVGG---HA----LSLAD---LENF------NPE  440 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~  440 (616)
                      +.+|+++|+|+ ||+|++++..|++.|++|+++.|+ .+..+.+.+.+..   ..    .|+.+   +.++      ...
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45789999998 799999999999999999998665 4445555544321   11    23322   1110      124


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|+|||+++..
T Consensus        85 ~id~lv~~Ag~~   96 (264)
T 3i4f_A           85 KIDFLINNAGPY   96 (264)
T ss_dssp             CCCEEECCCCCC
T ss_pred             CCCEEEECCccc
Confidence            689999999853

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.09  E-value=0.0011  Score=69.58  Aligned_cols=110  Identities=15%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH-------------------HHHHHHHHHHCCcccchhccccc
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY-------------------DRARELAETVGGHALSLADLENF  437 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~-------------------~ka~~la~~~~~~~~~~~~l~~~  437 (616)
                      .+++++|+|+|+||+|.+++..|+..|+ ++++++++.                   .|++.+++.+.          .+
T Consensus        31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~----------~i  100 (340)
T 3rui_A           31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLK----------RI  100 (340)
T ss_dssp             HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHH----------HH
T ss_pred             HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHH----------Hh
Confidence            4678999999999999999999999999 999998864                   34444444331          10


Q ss_pred             CCCCccEEEEcCCCCCCCCC--CC--Cccc----cccccCccEEEEEeeCCcccHHH--HHHHHcCCeEEcc
Q 007151          438 NPEDGMILANTTSIGMQPKV--DE--TPIP----KHALGHYALVFDAVYTPKITRLL--REAEESGATIVSG  499 (616)
Q Consensus       438 ~~~~~divInat~~gm~p~~--~~--~pi~----~~~l~~~~~v~Di~Y~P~~T~ll--~~A~~~G~~~i~G  499 (616)
                      . ...++......+.|..+.  ++  ..+.    .+.+.+..+|+|...++. |+++  +.+.+.|.+.+++
T Consensus       101 n-P~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~-tR~lin~~c~~~~~plI~a  170 (340)
T 3rui_A          101 F-PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE-SRWLPSLLSNIENKTVINA  170 (340)
T ss_dssp             C-TTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG-GGHHHHHHHHHTTCEEEEE
T ss_pred             C-CCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence            0 112222222222222110  00  0011    123566788999998875 5444  6677888887765

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.08  E-value=0.0017  Score=70.14  Aligned_cols=69  Identities=30%  Similarity=0.319  Sum_probs=52.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+.||+++|+|.|.+|+++|..+...|++|++++|++.++... ...+....+++++    ...+|+|+.+++
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-~~~G~~vv~LeEl----L~~ADIVv~atg  311 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-AMDGFEVVTLDDA----ASTADIVVTTTG  311 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEECCHHHH----GGGCSEEEECCS
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-HhcCceeccHHHH----HhhCCEEEECCC
Confidence            56899999999999999999999999999999999998775443 2334444455432    234688877664

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.08  E-value=0.00019  Score=70.28  Aligned_cols=72  Identities=15%  Similarity=0.151  Sum_probs=50.6

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTS  450 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~  450 (616)
                      +.+|+++|+|+ |++|++++..|.+.|+  +|++++|+.++.+++... +...  .++.+   +.+ ...+.|+|||+++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~~~~~-~~~~~d~vi~~ag   93 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK-NVNQEVVDFEKLDDYAS-AFQGHDVGFCCLG   93 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG-GCEEEECCGGGGGGGGG-GGSSCSEEEECCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC-CceEEecCcCCHHHHHH-HhcCCCEEEECCC
Confidence            56789999997 8999999999999999  999999986543322111 1111  23332   333 2456899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        94 ~~   95 (242)
T 2bka_A           94 TT   95 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.07  E-value=0.00048  Score=66.45  Aligned_cols=69  Identities=20%  Similarity=0.223  Sum_probs=50.4

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~~~~~~divInat~~g  452 (616)
                      +++|+|| |++|++++..|.+.|++|+++.|+.++.+++... +...  .++.+.......+.|+|||+++..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGA-TVATLVKEPLVLTEADLDSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCT-TSEEEECCGGGCCHHHHTTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCC-CceEEecccccccHhhcccCCEEEECCccC
Confidence            6999998 8999999999999999999999999887665321 1111  233322111245689999999875

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=97.07  E-value=0.00028  Score=73.74  Aligned_cols=117  Identities=15%  Similarity=0.196  Sum_probs=75.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+.+..+.+    . ......++++ ...++|+|+.++|..-.  
T Consensus       136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~----~-~~~~~~~l~e-ll~~aDvV~l~lPlt~~--  207 (324)
T 3hg7_A          136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF----D-QVYQLPALNK-MLAQADVIVSVLPATRE--  207 (324)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC----S-EEECGGGHHH-HHHTCSEEEECCCCCSS--
T ss_pred             cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh----h-cccccCCHHH-HHhhCCEEEEeCCCCHH--
Confidence            46789999999999999999999999999999999986322111    0 1111223333 23458999999996421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      +. ..+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|+++
T Consensus       208 T~-~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV  256 (324)
T 3hg7_A          208 TH-HLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDV  256 (324)
T ss_dssp             ST-TSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESC
T ss_pred             HH-HHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEecc
Confidence            11 123322   3567889999987644 455556666665433344553

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.07  E-value=0.0017  Score=70.69  Aligned_cols=37  Identities=24%  Similarity=0.275  Sum_probs=34.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ++++|+++|+|.|++|.++|..|.++|++|++++++.
T Consensus         6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            4678999999999999999999999999999999854

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.06  E-value=6.6e-05  Score=73.92  Aligned_cols=37  Identities=22%  Similarity=0.257  Sum_probs=33.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~   39 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND   39 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            4689999998 799999999999999999999998654

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.06  E-value=0.00061  Score=74.90  Aligned_cols=115  Identities=20%  Similarity=0.208  Sum_probs=75.1

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc-cchhcccccCCCCccEEEEcCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA-LSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~-~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ...+++.|+|+|.||.+++..|++.|.+|+++||+.++++++.+..+   ... .+.++... .++.+|+||-++|.+..
T Consensus        13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~-~l~~aDvVil~Vp~~~~   91 (480)
T 2zyd_A           13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVE-SLETPRRILLMVKAGAG   91 (480)
T ss_dssp             --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHH-TBCSSCEEEECSCSSSH
T ss_pred             cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHh-CCCCCCEEEEECCCHHH
Confidence            44678999999999999999999999999999999999999987642   111 12322211 22347999999987521


Q ss_pred             CCCCCCccc--cccccCccEEEEEeeCCc-ccH-HHHHHHHcCCeEE
Q 007151          455 PKVDETPIP--KHALGHYALVFDAVYTPK-ITR-LLREAEESGATIV  497 (616)
Q Consensus       455 p~~~~~pi~--~~~l~~~~~v~Di~Y~P~-~T~-ll~~A~~~G~~~i  497 (616)
                        .+. -+.  ...++++.+++|+.-... .|. +.+..++.|..++
T Consensus        92 --v~~-vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v  135 (480)
T 2zyd_A           92 --TDA-AIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFI  135 (480)
T ss_dssp             --HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             --HHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCee
Confidence              010 011  113566789999876533 333 3344455676654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.06  E-value=0.00041  Score=69.70  Aligned_cols=39  Identities=28%  Similarity=0.354  Sum_probs=35.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   44 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG   44 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            467899999998 799999999999999999999997654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.06  E-value=0.0002  Score=69.86  Aligned_cols=64  Identities=19%  Similarity=0.143  Sum_probs=45.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhccccc--CCCCccEEEEcCCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  452 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~--~~~~~divInat~~g  452 (616)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.+          ....+.+++.++  .....|++||+++..
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            56899999998 69999999999999999999998743          011111111110  124589999999864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.05  E-value=0.00022  Score=69.91  Aligned_cols=73  Identities=22%  Similarity=0.275  Sum_probs=51.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCC--C
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPE--D  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G--~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~--~  441 (616)
                      ++|+++|+|+ ||+|++++..|++.|  ++|++++|+.++.+++.+.-+...    .++.+   +.++      ...  .
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999998 799999999999999  899999999887776643211111    23322   1111      111  6


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|+|||+++..
T Consensus        82 id~li~~Ag~~   92 (250)
T 1yo6_A           82 LSLLINNAGVL   92 (250)
T ss_dssp             CCEEEECCCCC
T ss_pred             CcEEEECCccc
Confidence            89999999865

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.05  E-value=0.00028  Score=69.89  Aligned_cols=99  Identities=14%  Similarity=0.167  Sum_probs=61.0

Q ss_pred             ccCCcEEEEEcc-----------------chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhccccc---
Q 007151          378 ALAGKLFVVIGA-----------------GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF---  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-----------------GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~---  437 (616)
                      +++||+|||+|+                 ||+|+++|.+|++.|++|+++.|... .+ .  ..+...+++++..++   
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~--~~g~~~~dv~~~~~~~~~   80 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-T--PPFVKRVDVMTALEMEAA   80 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C--CTTEEEEECCSHHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c--CCCCeEEccCcHHHHHHH
Confidence            578999999998                 78999999999999999999887531 00 0  001112222221110   


Q ss_pred             ---CCCCccEEEEcCCCCCC-CCCCCCccccccccC-----ccEEEEEeeCCcccH
Q 007151          438 ---NPEDGMILANTTSIGMQ-PKVDETPIPKHALGH-----YALVFDAVYTPKITR  484 (616)
Q Consensus       438 ---~~~~~divInat~~gm~-p~~~~~pi~~~~l~~-----~~~v~Di~Y~P~~T~  484 (616)
                         ..+..|++||++++..+ |.    ...+..+++     ..+.+.+.-+|.--+
T Consensus        81 v~~~~~~~Dili~~Aav~d~~p~----~~~~~KIkk~~~~~~~l~l~L~~~pdIL~  132 (226)
T 1u7z_A           81 VNASVQQQNIFIGCAAVADYRAA----TVAPEKIKKQATQGDELTIKMVKNPDIVA  132 (226)
T ss_dssp             HHHHGGGCSEEEECCBCCSEEES----SCCSSCC-------CEEEEEEEECCCHHH
T ss_pred             HHHhcCCCCEEEECCcccCCCCc----cCChHHhccccccCCceEEEEeecHHHHH
Confidence               23468999999987532 21    122334444     246778887776443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0001  Score=74.14  Aligned_cols=73  Identities=19%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---cccc------CCCCccEEEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENF------NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~------~~~~~divIn  447 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+..  .......|+.+   +.++      ..+..|+|||
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP--DIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST--TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC--ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            467899999998 7999999999999999999999986542211  00000112221   1110      1246899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus       103 nAg~~  107 (260)
T 3un1_A          103 NAGVF  107 (260)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99875

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.03  E-value=0.0012  Score=59.67  Aligned_cols=110  Identities=21%  Similarity=0.173  Sum_probs=69.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--ch---hcccccCCCCccEEEEcCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--SL---ADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~~---~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++++|+|+|.+|+.++..|.+.|.+|++++|++++.+.+.+ .+...+  +.   +.+......++|++|.+++-...  
T Consensus         8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~--   84 (140)
T 3fwz_A            8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE--   84 (140)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHH--
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHH--
Confidence            57999999999999999999999999999999999888765 343321  11   11222234568999998884210  


Q ss_pred             CCCCcccc--ccccCccEEEEEeeCCcccHHHHHHHHcCCe-EEcc
Q 007151          457 VDETPIPK--HALGHYALVFDAVYTPKITRLLREAEESGAT-IVSG  499 (616)
Q Consensus       457 ~~~~pi~~--~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~-~i~G  499 (616)
                        ...+..  ..+.+...++-.+.+|...   +..++.|+. +++-
T Consensus        85 --n~~~~~~a~~~~~~~~iiar~~~~~~~---~~l~~~G~d~vi~p  125 (140)
T 3fwz_A           85 --AGEIVASARAKNPDIEIIARAHYDDEV---AYITERGANQVVMG  125 (140)
T ss_dssp             --HHHHHHHHHHHCSSSEEEEEESSHHHH---HHHHHTTCSEEEEH
T ss_pred             --HHHHHHHHHHHCCCCeEEEEECCHHHH---HHHHHCCCCEEECc
Confidence              000111  1123334455555555444   344567875 4443

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=97.03  E-value=0.0012  Score=68.45  Aligned_cols=114  Identities=16%  Similarity=0.159  Sum_probs=74.5

Q ss_pred             EEEEEccchhHHHH-HHHHHHCCCe-EEEEECCHHHHHHHHHHHCCc-c-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKAL-AYGAKAKGAR-VVIANRTYDRARELAETVGGH-A-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       383 ~vlVlGAGGagrAi-a~~L~~~G~~-V~v~nRt~~ka~~la~~~~~~-~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++.|+|+|++|+.. +.+|.+.|++ +.+++|+.+++++++++++.. . -+++++-+  ..+.|+|+.+||...+.   
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~---   76 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVG--DPDVDAVYVSTTNELHR---   76 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHT--CTTCCEEEECSCGGGHH---
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEEeCChhHhH---
Confidence            68999999999998 7788776776 558999999999999988753 2 23444321  23589999999965331   


Q ss_pred             CCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHHH
Q 007151          459 ETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       459 ~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                        ++....++.+. ++++  +..++.+ ..+.+.|+++|..+..|..+-
T Consensus        77 --~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r  123 (332)
T 2glx_A           77 --EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLR  123 (332)
T ss_dssp             --HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGG
T ss_pred             --HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhh
Confidence              12223455544 4332  1112222 446667778888877665543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.02  E-value=0.0012  Score=64.24  Aligned_cols=69  Identities=17%  Similarity=0.181  Sum_probs=54.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInat~~  451 (616)
                      +++|+|+|.+|+.++..|.+.|.+|++++|++++++++++..+...+     +.+.+......++|++|.+++-
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence            58999999999999999999999999999999999998877654321     2222333245678999998874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=97.02  E-value=0.00066  Score=71.53  Aligned_cols=119  Identities=18%  Similarity=0.235  Sum_probs=78.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~-~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ..+.|+++.|+|.|.+|++++..|. ..|.+|++++|+.++.+. +.+.+.... +++++    ..++|+|+.++|....
T Consensus       159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~-~~~~g~~~~~~l~el----l~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET-EKALGAERVDSLEEL----ARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH-HHHHTCEECSSHHHH----HHHCSEEEECCCCSGG
T ss_pred             cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh-HhhcCcEEeCCHHHH----hccCCEEEEeCCCChH
Confidence            4678999999999999999999999 999999999998655443 233444333 33332    2347999999997521


Q ss_pred             CCCCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          455 PKVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       455 p~~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      .  . ..+..   ..++++.+++|+.-.+. .+.-+.+|-+.|...--|++++
T Consensus       234 t--~-~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~  283 (348)
T 2w2k_A          234 T--H-HLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVH  283 (348)
T ss_dssp             G--T-TCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSC
T ss_pred             H--H-HHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccC
Confidence            1  1 11322   23567788889887644 3444555555554333455543

>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*

Probab=97.02  E-value=0.0085  Score=58.03  Aligned_cols=125  Identities=16%  Similarity=0.146  Sum_probs=79.6

Q ss_pred             CCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHH
Q 007151           20 RKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENE   99 (616)
Q Consensus        20 ~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~   99 (616)
                      |+....|+.+|...+.+++.+.++.+.+.|+|.||+|.-.   .+..+.++.+.+..+.|+++-.     |+.  .+.+ 
T Consensus         3 ~~~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~~~~~~i~~i~~~~~~~l~vg~-----g~~--~~~~-   71 (212)
T 2v82_A            3 WQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS---PQWEQSIPAIVDAYGDKALIGA-----GTV--LKPE-   71 (212)
T ss_dssp             CCSSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS---TTHHHHHHHHHHHHTTTSEEEE-----ECC--CSHH-
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHhCCCCeEEEe-----ccc--cCHH-
Confidence            4446678889999999999999999888999999998543   2223455566555567777621     121  1222 


Q ss_pred             HHHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          100 RVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       100 ~~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                         .++.+++.|+++|=+.- ...+..+...   ..+.+++.+.|    ||  +++    .++.+.|+|++++
T Consensus        72 ---~i~~a~~~Gad~V~~~~-~~~~~~~~~~---~~g~~~~~g~~----t~--~e~----~~a~~~G~d~v~v  127 (212)
T 2v82_A           72 ---QVDALARMGCQLIVTPN-IHSEVIRRAV---GYGMTVCPGCA----TA--TEA----FTALEAGAQALKI  127 (212)
T ss_dssp             ---HHHHHHHTTCCEEECSS-CCHHHHHHHH---HTTCEEECEEC----SH--HHH----HHHHHTTCSEEEE
T ss_pred             ---HHHHHHHcCCCEEEeCC-CCHHHHHHHH---HcCCCEEeecC----CH--HHH----HHHHHCCCCEEEE
Confidence               46677888999985332 1223333322   23566676655    32  333    3456789999996

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.01  E-value=8.5e-05  Score=77.66  Aligned_cols=117  Identities=18%  Similarity=0.239  Sum_probs=74.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.+.+    . ......++.+ ...++|+|+.++|..-.  
T Consensus       133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~----~-~~~~~~~l~e-ll~~aDvV~l~lPlt~~--  204 (324)
T 3evt_A          133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF----H-ETVAFTATAD-ALATANFIVNALPLTPT--  204 (324)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC----S-EEEEGGGCHH-HHHHCSEEEECCCCCGG--
T ss_pred             ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH----h-hccccCCHHH-HHhhCCEEEEcCCCchH--
Confidence            46789999999999999999999999999999999986542211    1 1111223333 23458999999986421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      + ...+...   .++++.+++|+.-.+. .+.-+.+|-+.|...--|+++
T Consensus       205 t-~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV  253 (324)
T 3evt_A          205 T-HHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDV  253 (324)
T ss_dssp             G-TTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESS
T ss_pred             H-HHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCC
Confidence            1 1123332   3567788888887544 455555565555432234443

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.01  E-value=0.0018  Score=59.36  Aligned_cols=71  Identities=13%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC--Cccc--ch---hcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG--GHAL--SL---ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~--~~~~--~~---~~l~~~~~~~~divInat~~  451 (616)
                      +++++|+|+|.+|+.++..|.+.|.+|++++|+ .++++.+.+.+.  ...+  +.   +.+.+....++|.+|.+++-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   81 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence            467999999999999999999999999999997 677777776553  2221  21   22222245678999999874

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=97.01  E-value=0.00067  Score=71.05  Aligned_cols=116  Identities=16%  Similarity=0.194  Sum_probs=80.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.  + +.+ .... +++++    ..++|+|+.++|.... 
T Consensus       142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~~~~l~el----l~~aDvV~l~~p~~~~-  212 (333)
T 1j4a_A          142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYYVDSLDDL----YKQADVISLHVPDVPA-  212 (333)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCBCSCHHHH----HHHCSEEEECSCCCGG-
T ss_pred             ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-CeecCCHHHH----HhhCCEEEEcCCCcHH-
Confidence            46789999999999999999999999999999999987654  2 222 2222 33332    2357999999996421 


Q ss_pred             CCCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       . ...+..   ..++++.+++|+.-.+. .+.-+.+|-+.|...--|++++
T Consensus       213 -t-~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~  262 (333)
T 1j4a_A          213 -N-VHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVY  262 (333)
T ss_dssp             -G-TTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             -H-HHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecC
Confidence             1 112332   23577889999987644 5666666766666555666654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.00  E-value=0.0017  Score=64.38  Aligned_cols=70  Identities=27%  Similarity=0.299  Sum_probs=48.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~div  445 (616)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.+.     +..+...  .|+.+   +.++      .....|+|
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999998 799999999999999999999998542     1111111  22222   1110      13468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        79 v~~Ag~~   85 (250)
T 2fwm_X           79 VNAAGIL   85 (250)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            9999865

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=97.00  E-value=0.00066  Score=72.01  Aligned_cols=119  Identities=17%  Similarity=0.181  Sum_probs=79.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGAR-VVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~-V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++ |++++|+..+.+ .+.+.+.... +++++    ..++|+|+.++|..-.
T Consensus       160 ~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~-~~~~~g~~~~~~l~el----l~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          160 YDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD-AEEKVGARRVENIEEL----VAQADIVTVNAPLHAG  234 (364)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH-HHHHTTEEECSSHHHH----HHTCSEEEECCCCSTT
T ss_pred             ccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh-HHHhcCcEecCCHHHH----HhcCCEEEECCCCChH
Confidence            468899999999999999999999999996 999999864433 2334443322 33332    2358999999997421


Q ss_pred             CCCCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          455 PKVDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       455 p~~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                        + ...+..   ..++++.+++|+.-.+. .+.-+.+|-+.|...--|++++
T Consensus       235 --t-~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf  284 (364)
T 2j6i_A          235 --T-KGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVW  284 (364)
T ss_dssp             --T-TTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             --H-HHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecC
Confidence              1 112332   23567788999987644 4555555656565444566644

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.99  E-value=0.00079  Score=68.53  Aligned_cols=42  Identities=19%  Similarity=0.252  Sum_probs=38.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      +++.|+|+|.+|++++..|++.|++|++++|+.++++++.+.
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            689999999999999999999999999999999988887665

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.97  E-value=0.0001  Score=72.93  Aligned_cols=38  Identities=16%  Similarity=0.172  Sum_probs=33.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   43 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE   43 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence            45789999998 799999999999999999999998654

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.97  E-value=0.00092  Score=69.99  Aligned_cols=106  Identities=18%  Similarity=0.202  Sum_probs=71.2

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.|+++.|+|.|.+|++++..|...|++|++++|+.++  +.+.+++....+++++    ..++|+|+.++|....  .
T Consensus       143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~~l~e~----l~~aDiVil~vp~~~~--t  214 (333)
T 2d0i_A          143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV--NVEKELKARYMDIDEL----LEKSDIVILALPLTRD--T  214 (333)
T ss_dssp             CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH--HHHHHHTEEECCHHHH----HHHCSEEEECCCCCTT--T
T ss_pred             CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch--hhhhhcCceecCHHHH----HhhCCEEEEcCCCChH--H
Confidence            578999999999999999999999999999999998775  3334444333333332    2357999999997521  1


Q ss_pred             CCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          458 DETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       458 ~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                      . ..+..   ..++++ +++|+.-.+. .+.-+.+|-+.|
T Consensus       215 ~-~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~  252 (333)
T 2d0i_A          215 Y-HIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQG  252 (333)
T ss_dssp             T-TSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTT
T ss_pred             H-HHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcC
Confidence            1 12322   235677 8888886544 343344454544

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.97  E-value=0.00076  Score=69.25  Aligned_cols=116  Identities=11%  Similarity=0.049  Sum_probs=75.6

Q ss_pred             CcEEEEEccchhHHH-HHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKA-LAYGAKAK-GARVV-IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       381 ~k~vlVlGAGGagrA-ia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      ..++.|+|+|.+|+. .+..|.+. +++++ |++|+.+++++++++++...  +.+++++ +.+.|+|+.+||...+.  
T Consensus         6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~--~~~~~~l-l~~~D~V~i~tp~~~h~--   80 (308)
T 3uuw_A            6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMP--FDSIESL-AKKCDCIFLHSSTETHY--   80 (308)
T ss_dssp             CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCB--CSCHHHH-HTTCSEEEECCCGGGHH--
T ss_pred             cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCC--cCCHHHH-HhcCCEEEEeCCcHhHH--
Confidence            468999999999996 78888774 66655 89999999999999987643  3333332 12689999999975432  


Q ss_pred             CCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHHHH
Q 007151          458 DETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       458 ~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                         ++....++.+. ++++  +..++.+ -.+.+.|+++|..+.-|...-.
T Consensus        81 ---~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~  128 (308)
T 3uuw_A           81 ---EIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRF  128 (308)
T ss_dssp             ---HHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred             ---HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeecccc
Confidence               12223344443 3333  2222222 3356677788888777766543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.96  E-value=0.0052  Score=66.33  Aligned_cols=95  Identities=26%  Similarity=0.263  Sum_probs=64.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||+++|+|.|.+|++++..|...|++|++++|++.++.... ..+....+++++    ..++|++|.+++..  ..
T Consensus       207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~sL~ea----l~~ADVVilt~gt~--~i  279 (436)
T 3h9u_A          207 VMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVLLVEDV----VEEAHIFVTTTGND--DI  279 (436)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCHHHH----TTTCSEEEECSSCS--CS
T ss_pred             CcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeecCHHHH----HhhCCEEEECCCCc--Cc
Confidence            467899999999999999999999999999999999987765433 334444444432    34589999766421  11


Q ss_pred             CCCCccccccccCccEEEEEeeCC
Q 007151          457 VDETPIPKHALGHYALVFDAVYTP  480 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P  480 (616)
                      .+...+  ..++++.+++++.-.+
T Consensus       280 I~~e~l--~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          280 ITSEHF--PRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             BCTTTG--GGCCTTEEEEECSSSG
T ss_pred             cCHHHH--hhcCCCcEEEEeCCCC
Confidence            111111  2346677777776443

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=96.95  E-value=0.0016  Score=65.00  Aligned_cols=64  Identities=25%  Similarity=0.322  Sum_probs=52.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ++.|+|+|.+|.+++..|.+.| .+|++++|+.++++++.+.++....  .+..+ .. ++|+||-++|
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~--~~~~~-~~-~~D~vi~~v~   66 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS--ATLPE-LH-SDDVLILAVK   66 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE--SSCCC-CC-TTSEEEECSC
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEe--CCHHH-Hh-cCCEEEEEeC
Confidence            6899999999999999999999 8999999999999999887654321  22333 34 6899999998

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.95  E-value=0.00067  Score=70.03  Aligned_cols=112  Identities=19%  Similarity=0.124  Sum_probs=73.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      +.+++.|+|+|.+|.+++..|++.|++|++++|+.++++++.+. +... .+..+.    ..++|+||-++|....  ..
T Consensus        20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~~~~~~~~----~~~aDvvi~~vp~~~~--~~   92 (310)
T 3doj_A           20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GASVCESPAEV----IKKCKYTIAMLSDPCA--AL   92 (310)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEECSSHHHH----HHHCSEEEECCSSHHH--HH
T ss_pred             cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCeEcCCHHHH----HHhCCEEEEEcCCHHH--HH
Confidence            34789999999999999999999999999999999998888743 3322 122222    2347999999885311  00


Q ss_pred             CCcc--c--cccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEc
Q 007151          459 ETPI--P--KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  498 (616)
Q Consensus       459 ~~pi--~--~~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~  498 (616)
                      ...+  .  ...+.++.+++|+.-.+..+  .+.+..++.|...++
T Consensus        93 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~  138 (310)
T 3doj_A           93 SVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE  138 (310)
T ss_dssp             HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            0000  0  12356778999998754433  233344567776543

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.94  E-value=0.0013  Score=69.21  Aligned_cols=107  Identities=20%  Similarity=0.245  Sum_probs=73.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .+.|+++.|+|.|.+|++++..|...|++|++++|+.++.  .+..++.... +++++    ..++|+|+.++|..-.  
T Consensus       165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~~~l~el----l~~aDvV~l~~P~t~~--  236 (347)
T 1mx3_A          165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRVSTLQDL----LFHSDCVTLHCGLNEH--  236 (347)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEECSSHHHH----HHHCSEEEECCCCCTT--
T ss_pred             CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCeecCCHHHH----HhcCCEEEEcCCCCHH--
Confidence            6789999999999999999999999999999999976542  3344554332 34333    2347999999996421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                      +. ..+...   .++++.+++|+.-.+. .+.-+.+|-+.|
T Consensus       237 t~-~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g  276 (347)
T 1mx3_A          237 NH-HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG  276 (347)
T ss_dssp             CT-TSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred             HH-HHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence            11 123222   3567789999988754 444445554444

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.94  E-value=0.001  Score=69.55  Aligned_cols=109  Identities=19%  Similarity=0.172  Sum_probs=71.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.++++.|+|.|.+|++++..|...|.+|++++|+.++.+.. .+.+....+++++    ..++|+|+.++|..... 
T Consensus       151 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~~l~e~----l~~aDvVi~~vp~~~~t-  224 (330)
T 2gcg_A          151 YGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFVSTPEL----AAQSDFIVVACSLTPAT-  224 (330)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEECCHHHH----HHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeCCHHHH----HhhCCEEEEeCCCChHH-
Confidence            46789999999999999999999999999999999986654433 2333332233332    23579999999975221 


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                        ...+..   ..++++.+++|+.-.+. .+.-+.++-+.|
T Consensus       225 --~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~  263 (330)
T 2gcg_A          225 --EGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASG  263 (330)
T ss_dssp             --TTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             --HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcC
Confidence              112321   23567788888887644 334344443333

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.94  E-value=0.00048  Score=70.08  Aligned_cols=109  Identities=16%  Similarity=0.127  Sum_probs=72.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++.|+|+|.+|.+++..|.+.|++|++++|++++++.+.+. +... .+.++.    ..++|+||-++|....  ....
T Consensus         2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~~~----~~~advvi~~v~~~~~--~~~v   74 (287)
T 3pdu_A            2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-GARQASSPAEV----CAACDITIAMLADPAA--AREV   74 (287)
T ss_dssp             CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-TCEECSCHHHH----HHHCSEEEECCSSHHH--HHHH
T ss_pred             CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCeecCCHHHH----HHcCCEEEEEcCCHHH--HHHH
Confidence            468999999999999999999999999999999998888764 3222 122222    2347999999985311  0000


Q ss_pred             -----ccccccccCccEEEEEeeCCcc-cH-HHHHHHHcCCeEEc
Q 007151          461 -----PIPKHALGHYALVFDAVYTPKI-TR-LLREAEESGATIVS  498 (616)
Q Consensus       461 -----pi~~~~l~~~~~v~Di~Y~P~~-T~-ll~~A~~~G~~~i~  498 (616)
                           .+ ...+.++.+++|..-.+.. +. +.+..++.|..+++
T Consensus        75 ~~~~~~l-~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~  118 (287)
T 3pdu_A           75 CFGANGV-LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE  118 (287)
T ss_dssp             HHSTTCG-GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HcCchhh-hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence                 01 1235677889999876443 22 23344567777654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.93  E-value=0.0019  Score=64.11  Aligned_cols=72  Identities=10%  Similarity=0.023  Sum_probs=47.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh-------cccccCCCCccEEEEcC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA-------DLENFNPEDGMILANTT  449 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~-------~l~~~~~~~~divInat  449 (616)
                      +.-+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+..  .+.....+.+       ++.+ .....|+|||++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--~~~~d~~d~~~v~~~~~~~~~-~~g~iD~li~~A   95 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--SFTIKDSGEEEIKSVIEKINS-KSIKVDTFVCAA   95 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--EEECSCSSHHHHHHHHHHHHT-TTCCEEEEEECC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--ceEEEeCCHHHHHHHHHHHHH-HcCCCCEEEECC
Confidence            345789999998 7999999999999999999999986543210  0000011111       1111 345689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        96 g~~   98 (251)
T 3orf_A           96 GGW   98 (251)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            864

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.89  E-value=0.00031  Score=69.60  Aligned_cols=65  Identities=15%  Similarity=0.161  Sum_probs=45.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---ccccc--CC-CCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DLENF--NP-EDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~---~l~~~--~~-~~~divInat~~g  452 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+.   .+   ..++.   ++.++  .. ...|+|||+++..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~---~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---DL---STAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CT---TSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---cc---ccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            57999998 799999999999999999999998654321   01   11221   11111  22 5679999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.89  E-value=0.00087  Score=67.29  Aligned_cols=68  Identities=15%  Similarity=0.198  Sum_probs=52.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCccEEEEcCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .++++|+|||.+|++++.+|.+.|++|+++.|+.++...+... +...  .++.++.   ..++|+|||+++..
T Consensus         5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~D~~d~~---~~~~d~vi~~a~~~   74 (286)
T 3ius_A            5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-GAEPLLWPGEEPS---LDGVTHLLISTAPD   74 (286)
T ss_dssp             CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHT-TEEEEESSSSCCC---CTTCCEEEECCCCB
T ss_pred             cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhC-CCeEEEecccccc---cCCCCEEEECCCcc
Confidence            3789999999999999999999999999999998887666432 2121  2444433   46789999998753

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.88  E-value=0.014  Score=62.66  Aligned_cols=129  Identities=22%  Similarity=0.214  Sum_probs=86.4

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nR----------t~~ka~~la~  422 (616)
                      +.|.+..++..++..       +.++++++|+|.|.|.+|+.++..|.+.|++|+ |.++          +.+...++.+
T Consensus       198 g~Gv~~~~~~~~~~~-------g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~  270 (419)
T 3aoe_E          198 GLGALLVLEALAKRR-------GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYE  270 (419)
T ss_dssp             HHHHHHHHHHHHHHH-------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc-------CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHH
Confidence            578887777665431       247899999999999999999999999999776 8888          8899988888


Q ss_pred             HHCCc---ccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH-HHHHcCCeEEc
Q 007151          423 TVGGH---ALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR-EAEESGATIVS  498 (616)
Q Consensus       423 ~~~~~---~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~-~A~~~G~~~i~  498 (616)
                      +.+.-   .++-+++-   ...+|+++.|+.-+..   +.  -+...+ ..++|++-.-+|- |+--. .-+++|+.+++
T Consensus       271 ~~g~v~~~~~~~~e~~---~~~~DVliP~A~~n~i---~~--~~A~~l-~ak~V~EgAN~p~-t~~A~~~L~~~Gi~~~P  340 (419)
T 3aoe_E          271 ATGSLPRLDLAPEEVF---GLEAEVLVLAAREGAL---DG--DRARQV-QAQAVVEVANFGL-NPEAEAYLLGKGALVVP  340 (419)
T ss_dssp             HHSSCSCCCBCTTTGG---GSSCSEEEECSCTTCB---CH--HHHTTC-CCSEEEECSTTCB-CHHHHHHHHHHTCEEEC
T ss_pred             hhCCcceeeccchhhh---ccCceEEEeccccccc---cc--chHhhC-CceEEEECCCCcC-CHHHHHHHHHCCCEEEC
Confidence            76521   11112221   1358999998753321   11  111123 4578889887774 54322 22467998885


Q ss_pred             c
Q 007151          499 G  499 (616)
Q Consensus       499 G  499 (616)
                      +
T Consensus       341 D  341 (419)
T 3aoe_E          341 D  341 (419)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.88  E-value=0.0014  Score=69.21  Aligned_cols=36  Identities=19%  Similarity=0.451  Sum_probs=33.0

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      +++++|+|+|+||+|..++..|+..|+ ++++++++.
T Consensus       116 L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          116 LKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            457899999999999999999999999 999999863

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.87  E-value=0.00054  Score=73.83  Aligned_cols=36  Identities=31%  Similarity=0.176  Sum_probs=32.6

Q ss_pred             CCcEEEEEccc-hhHHHHHHHHHH-CCCeEEEEECCHH
Q 007151          380 AGKLFVVIGAG-GAGKALAYGAKA-KGARVVIANRTYD  415 (616)
Q Consensus       380 ~~k~vlVlGAG-GagrAia~~L~~-~G~~V~v~nRt~~  415 (616)
                      .+|++||+|++ |+|+|++.+|++ .|++|++++|+.+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~   97 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKP   97 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            47999999985 999999999999 9999999998754

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.00061  Score=66.73  Aligned_cols=90  Identities=19%  Similarity=0.250  Sum_probs=62.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEE-EECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVI-ANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v-~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      -.++.|+|+|.+|.+++..|.+.|.+|++ ++|+.+++++++++++..... +..+  ...++|+||.++|.......- 
T Consensus        23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-~~~~--~~~~aDvVilavp~~~~~~v~-   98 (220)
T 4huj_A           23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-VELK--DALQADVVILAVPYDSIADIV-   98 (220)
T ss_dssp             SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-CCHH--HHTTSSEEEEESCGGGHHHHH-
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-ChHH--HHhcCCEEEEeCChHHHHHHH-
Confidence            36899999999999999999999999888 999999999999887643321 1111  124579999999853221100 


Q ss_pred             CccccccccCccEEEEEe
Q 007151          460 TPIPKHALGHYALVFDAV  477 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~  477 (616)
                      ..+..  + +..+++|+.
T Consensus        99 ~~l~~--~-~~~ivi~~~  113 (220)
T 4huj_A           99 TQVSD--W-GGQIVVDAS  113 (220)
T ss_dssp             TTCSC--C-TTCEEEECC
T ss_pred             HHhhc--c-CCCEEEEcC
Confidence            01211  2 356888887

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=96.86  E-value=0.0019  Score=66.36  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=39.5

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      +.|+|.|+|+|-||..+|..|+ .|++|+++||++++++++.+.
T Consensus        11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~   53 (293)
T 1zej_A           11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ   53 (293)
T ss_dssp             -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH
Confidence            5689999999999999999999 999999999999999888776

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.86  E-value=0.00023  Score=73.23  Aligned_cols=111  Identities=17%  Similarity=0.109  Sum_probs=72.8

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .+.|+++.|+|.|.+|++++..|...|++|+.++|+.++.+.      .... +++++    ..++|+|+.++|....  
T Consensus       119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~~~~~l~el----l~~aDiV~l~~P~t~~--  186 (290)
T 3gvx_A          119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DVISESPADL----FRQSDFVLIAIPLTDK--  186 (290)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SEECSSHHHH----HHHCSEEEECCCCCTT--
T ss_pred             eeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------ccccCChHHH----hhccCeEEEEeecccc--
Confidence            578999999999999999999999999999999998654221      1111 22222    3358999999996421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~  501 (616)
                      +. ..+...   .++++.+++|+.-.+. .+.-+.+|-+.|...--|++
T Consensus       187 t~-~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lD  234 (290)
T 3gvx_A          187 TR-GMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSD  234 (290)
T ss_dssp             TT-TCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEES
T ss_pred             ch-hhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeec
Confidence            11 123332   3578899999987543 45555555554432223444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.86  E-value=0.00015  Score=70.27  Aligned_cols=70  Identities=21%  Similarity=0.208  Sum_probs=48.2

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---ccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      ++++|+|| |++|++++..|.+.|++|+++.|+.++.+.+...+.....++.+   +.+ ...++|+|||+++..
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCE-VCKGADAVISAFNPG   78 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHH-HHTTCSEEEECCCC-
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHH-HhcCCCEEEEeCcCC
Confidence            68999997 89999999999999999999999977654332111001123322   222 234689999998754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.84  E-value=0.002  Score=69.54  Aligned_cols=74  Identities=15%  Similarity=0.073  Sum_probs=51.3

Q ss_pred             cCCcEEEEEcc-chhHHH--HHHHHHHCCCeEEEEECCH---------------HHHHHHHHHHCCcc----cchhc---
Q 007151          379 LAGKLFVVIGA-GGAGKA--LAYGAKAKGARVVIANRTY---------------DRARELAETVGGHA----LSLAD---  433 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrA--ia~~L~~~G~~V~v~nRt~---------------~ka~~la~~~~~~~----~~~~~---  433 (616)
                      ..+|+++|+|+ +|+|++  ++.+|++.|++|++++|+.               +..+++++..+...    +|+.+   
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            57899999998 599999  8888888899999999853               33444445544332    23322   


Q ss_pred             cccc------CCCCccEEEEcCCCC
Q 007151          434 LENF------NPEDGMILANTTSIG  452 (616)
Q Consensus       434 l~~~------~~~~~divInat~~g  452 (616)
                      +..+      ..+..|++||+++.+
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccc
Confidence            1110      346799999998864

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.83  E-value=0.00032  Score=67.85  Aligned_cols=68  Identities=13%  Similarity=0.236  Sum_probs=48.8

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc----ccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD----LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~----l~~~~~~~~divInat~~g  452 (616)
                      +++|+|| |++|++++..|.+.|++|+++.|+.++.+++ ........++.+    +.+ ...++|+|||+++..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~D~~d~~~~~~~-~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NNVKAVHFDVDWTPEEMAK-QLHGMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TTEEEEECCTTSCHHHHHT-TTTTCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CCceEEEecccCCHHHHHH-HHcCCCEEEECCcCC
Confidence            6999996 8999999999999999999999998765433 110001123333    333 456799999999864

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.83  E-value=0.0011  Score=66.12  Aligned_cols=87  Identities=18%  Similarity=0.208  Sum_probs=62.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .++.|+|+|.+|++++..|.+.|.+|++++|+.++++++++.++.... +.++.    ..++|+||.++|.....     
T Consensus         4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~D~Vi~~v~~~~~~-----   74 (259)
T 2ahr_A            4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDL----IDQVDLVILGIKPQLFE-----   74 (259)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHH----HHTCSEEEECSCGGGHH-----
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHH----HhcCCEEEEEeCcHhHH-----
Confidence            479999999999999999999999999999999999999887764432 23222    23579999999843211     


Q ss_pred             ccccccccCccEEEEEee
Q 007151          461 PIPKHALGHYALVFDAVY  478 (616)
Q Consensus       461 pi~~~~l~~~~~v~Di~Y  478 (616)
                      .+.. .+.++.+++|...
T Consensus        75 ~v~~-~l~~~~~vv~~~~   91 (259)
T 2ahr_A           75 TVLK-PLHFKQPIISMAA   91 (259)
T ss_dssp             HHHT-TSCCCSCEEECCT
T ss_pred             HHHH-HhccCCEEEEeCC
Confidence            1111 1335568888854

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.83  E-value=0.0023  Score=69.82  Aligned_cols=75  Identities=32%  Similarity=0.425  Sum_probs=54.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHHHCCcc--cchhccc---cc------CCC-Cc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT--YDRARELAETVGGHA--LSLADLE---NF------NPE-DG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt--~~ka~~la~~~~~~~--~~~~~l~---~~------~~~-~~  442 (616)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+  .+..+++.++.+...  +++.+.+   .+      ... ..
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            467899999997 799999999999999999999996  345556666665433  2332211   10      123 38


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |+|||++++.
T Consensus       290 d~lV~nAGv~  299 (454)
T 3u0b_A          290 DILVNNAGIT  299 (454)
T ss_dssp             SEEEECCCCC
T ss_pred             eEEEECCccc
Confidence            9999999875

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.82  E-value=0.00058  Score=70.87  Aligned_cols=110  Identities=15%  Similarity=0.119  Sum_probs=68.1

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC-CeEEEEECCH---HHHHHHHHHH---CCcccchh-cccccCCCCccEEEEcCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTY---DRARELAETV---GGHALSLA-DLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~---~ka~~la~~~---~~~~~~~~-~l~~~~~~~~divInat~~gm  453 (616)
                      +++.|||+|.+|.+++..|++.| .+|++++|+.   +++++..+.+   +.    .. +..+ ...++|+||-++|...
T Consensus        25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~----~~~s~~e-~~~~aDvVi~avp~~~   99 (317)
T 4ezb_A           25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV----EPLDDVA-GIACADVVLSLVVGAA   99 (317)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC----EEESSGG-GGGGCSEEEECCCGGG
T ss_pred             CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC----CCCCHHH-HHhcCCEEEEecCCHH
Confidence            68999999999999999999999 8999999997   3333333322   22    22 2222 2345899999998642


Q ss_pred             CCCCCCCccccccccCccEEEEEeeCCcc-cHHH-HHHHHcCCeEEc
Q 007151          454 QPKVDETPIPKHALGHYALVFDAVYTPKI-TRLL-REAEESGATIVS  498 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll-~~A~~~G~~~i~  498 (616)
                      .... ...+ ...++++.+++|..-.+.. +.-+ +..++.|...++
T Consensus       100 ~~~~-~~~i-~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d  144 (317)
T 4ezb_A          100 TKAV-AASA-APHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE  144 (317)
T ss_dssp             HHHH-HHHH-GGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred             HHHH-HHHH-HhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence            2110 0001 1235677899999865443 3222 333456765543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.82  E-value=0.00015  Score=75.58  Aligned_cols=118  Identities=19%  Similarity=0.084  Sum_probs=77.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|+++|..|...|++|+.++|+.++.+.+.     ......++++ ...++|+|+.++|..-.  
T Consensus       135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~~~~~~l~e-ll~~aDiV~l~~Plt~~--  206 (315)
T 3pp8_A          135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVE-----SYVGREELRA-FLNQTRVLINLLPNTAQ--  206 (315)
T ss_dssp             CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCE-----EEESHHHHHH-HHHTCSEEEECCCCCGG--
T ss_pred             CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhh-----hhcccCCHHH-HHhhCCEEEEecCCchh--
Confidence            357899999999999999999999999999999999865321110     0111122333 23458999999996421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++
T Consensus       207 t-~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~  256 (315)
T 3pp8_A          207 T-VGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVF  256 (315)
T ss_dssp             G-TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             h-hhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCC
Confidence            1 1123332   3567889999987654 4666666766665555566644

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.82  E-value=0.0018  Score=69.33  Aligned_cols=119  Identities=12%  Similarity=0.028  Sum_probs=79.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+..+.+ .+...+... .+++++    ..++|+|+.++|..-  
T Consensus       187 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~G~~~~~~l~el----l~~aDvV~l~~Plt~--  259 (393)
T 2nac_A          187 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWHATREDM----YPVCDVVTLNCPLHP--  259 (393)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEECSSHHHH----GGGCSEEEECSCCCT--
T ss_pred             ccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchh-hHhhcCceecCCHHHH----HhcCCEEEEecCCch--
Confidence            468899999999999999999999999999999999854432 344445433 234332    345899999999742  


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      .+ ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++
T Consensus       260 ~t-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~  310 (393)
T 2nac_A          260 ET-EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVW  310 (393)
T ss_dssp             TT-TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCC
T ss_pred             HH-HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEec
Confidence            11 1123322   3567889999987644 4444555666664433455543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.81  E-value=0.0013  Score=67.51  Aligned_cols=37  Identities=16%  Similarity=0.278  Sum_probs=34.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|+||.|..++..|+..|+ +++|++++.
T Consensus        33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            4677899999999999999999999999 999999876

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=96.80  E-value=0.00084  Score=69.27  Aligned_cols=124  Identities=16%  Similarity=0.085  Sum_probs=80.9

Q ss_pred             cEEEEEccchhHHH-HHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKA-LAYGAKAK-GARVV-IANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAGGagrA-ia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .++.|+|+|.+|+. .+..|.+. |++++ +++|+.++++++++.++.... +++++    ..+.|+|+.+||.....  
T Consensus         6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l----~~~~D~V~i~tp~~~h~--   79 (319)
T 1tlt_A            6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSL----AASCDAVFVHSSTASHF--   79 (319)
T ss_dssp             EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHH----HTTCSEEEECSCTTHHH--
T ss_pred             ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHh----hcCCCEEEEeCCchhHH--
Confidence            57999999999996 88888764 56655 999999999999998875422 33333    24589999999965431  


Q ss_pred             CCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHHHHHHHHHHHHHH
Q 007151          458 DETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLEMFIGQAYEQYERF  514 (616)
Q Consensus       458 ~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~MLv~Qa~~qf~lw  514 (616)
                         ++....++.+. ++++  +..++.+ ..+.+.|++.|..+..|..+....+....+-+
T Consensus        80 ---~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~k~~  137 (319)
T 1tlt_A           80 ---DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQ  137 (319)
T ss_dssp             ---HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHHHHHHTTT
T ss_pred             ---HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHH
Confidence               12223455444 4443  1112222 34667788889888888776554444444333

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.80  E-value=0.00026  Score=67.12  Aligned_cols=70  Identities=16%  Similarity=0.118  Sum_probs=48.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      +++++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+. .-+...  .++.+   +.+ ...+.|+|||+++..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDK-TVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHH-HHTTCSEEEECCCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHH-HHcCCCEEEECccCC
Confidence            378999998 89999999999999999999999876543221 001111  23322   222 234689999999753

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.79  E-value=0.0014  Score=72.15  Aligned_cols=113  Identities=20%  Similarity=0.221  Sum_probs=76.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH--CCcc---cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV--GGHA---LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~--~~~~---~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      +++.|||.|-||.+++..|++.|++|+++||+.++++++.+.-  +...   .+++++.+ .+..+|+||-++|.+..  
T Consensus         5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~-~l~~aDvVil~Vp~~~~--   81 (484)
T 4gwg_A            5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVS-KLKKPRRIILLVKAGQA--   81 (484)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-TBCSSCEEEECSCSSHH--
T ss_pred             CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHh-hccCCCEEEEecCChHH--
Confidence            5799999999999999999999999999999999999987752  1111   23333322 23458999999987521  


Q ss_pred             CCCCccc--cccccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEEc
Q 007151          457 VDETPIP--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  498 (616)
Q Consensus       457 ~~~~pi~--~~~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i~  498 (616)
                      .+. -+.  ...++++.+++|..-.+. .| .+.+..+++|+..++
T Consensus        82 v~~-vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd  126 (484)
T 4gwg_A           82 VDD-FIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVG  126 (484)
T ss_dssp             HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHH-HHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcccccc
Confidence            010 011  123567889999986543 33 233445567876543

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.79  E-value=0.0028  Score=65.62  Aligned_cols=71  Identities=24%  Similarity=0.295  Sum_probs=53.7

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhc---c----cccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLAD---L----ENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~---l----~~~~~~~~divInat~  450 (616)
                      .+++++|+|+ ||+|++++..++..|++|++++|+.++.+.+ ++++.. .++..+   +    .+.....+|++||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            5789999998 9999999999999999999999999888776 666643 233322   1    1111136899999997


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       224 ~  224 (333)
T 1v3u_A          224 G  224 (333)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=96.78  E-value=0.0017  Score=69.15  Aligned_cols=117  Identities=17%  Similarity=0.195  Sum_probs=74.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|++++..|...|++|++++|..+...     .+....+++++    ..++|+|+.++|..-.+.
T Consensus       115 ~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~~~~~~sl~el----l~~aDiV~l~~Plt~~g~  185 (381)
T 3oet_A          115 FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----DEGDFRTLDEL----VQEADVLTFHTPLYKDGP  185 (381)
T ss_dssp             CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----CCSCBCCHHHH----HHHCSEEEECCCCCCSST
T ss_pred             CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----cCcccCCHHHH----HhhCCEEEEcCcCCcccc
Confidence            468899999999999999999999999999999998544321     11122333332    234799999999652200


Q ss_pred             -CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          457 -VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       457 -~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                       .....+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--++++
T Consensus       186 ~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV  236 (381)
T 3oet_A          186 YKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDV  236 (381)
T ss_dssp             TCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred             ccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeec
Confidence             011123332   3467788888876544 455555565555433334443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.78  E-value=0.0011  Score=74.87  Aligned_cols=73  Identities=32%  Similarity=0.398  Sum_probs=50.7

Q ss_pred             ccCCcEEEEEccc-hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH---CCcc----cch-hccccc------CCCCc
Q 007151          378 ALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHA----LSL-ADLENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGAG-GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~---~~~~----~~~-~~l~~~------~~~~~  442 (616)
                      ++++|.++|+|++ |+|++++..|++.|++|++.+|..  ++++++++   +...    .++ ++.+.+      ..+..
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            5789999999985 999999999999999999998632  22333332   3322    244 322111      23568


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus       397 DiLVnNAGi~  406 (604)
T 2et6_A          397 DILVNNAGIL  406 (604)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999875

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.78  E-value=0.0011  Score=72.74  Aligned_cols=68  Identities=26%  Similarity=0.297  Sum_probs=49.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT  449 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat  449 (616)
                      ..+.||+++|+|.|.+|+++|..|...|++|++++|+..++.... ..+....+++++    ..++|+||.++
T Consensus       273 ~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~~~~l~el----l~~aDiVi~~~  340 (494)
T 3d64_A          273 VMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYRVVTMEYA----ADKADIFVTAT  340 (494)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCEECCHHHH----TTTCSEEEECS
T ss_pred             cccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCEeCCHHHH----HhcCCEEEECC
Confidence            468899999999999999999999999999999999988753322 223333333322    34467777766

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.77  E-value=0.0011  Score=63.03  Aligned_cols=69  Identities=28%  Similarity=0.365  Sum_probs=51.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccC--CCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFN--PEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~--~~~~divInat~~g  452 (616)
                      |+++|+|+ ||+|++++..|++.  +|++++|+.++.+++.++++...  .|+.+   +.++.  ....|+|||+++..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            57999998 79999999999988  99999999999988887764322  23322   22210  13689999999864

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=96.75  E-value=0.00061  Score=71.30  Aligned_cols=116  Identities=18%  Similarity=0.152  Sum_probs=78.4

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  + +.. ....+++++    ..++|+|+.++|....  
T Consensus       142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~~~l~el----l~~aDvV~~~~p~t~~--  211 (331)
T 1xdw_A          142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-CTQVSLDEV----LEKSDIITIHAPYIKE--  211 (331)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-CEECCHHHH----HHHCSEEEECCCCCTT--
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-cccCCHHHH----HhhCCEEEEecCCchH--
Confidence            46789999999999999999999999999999999986542  1 111 112233222    2357999999987421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      +. ..+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++
T Consensus       212 t~-~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~  261 (331)
T 1xdw_A          212 NG-AVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVL  261 (331)
T ss_dssp             TC-CSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             HH-HHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecC
Confidence            11 123322   3577889999987543 5566666666666555666654

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=96.75  E-value=0.00083  Score=69.69  Aligned_cols=101  Identities=26%  Similarity=0.253  Sum_probs=68.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.++.+       ....+++++    ..++|+|+.++|..... 
T Consensus       140 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-------~~~~~l~el----l~~aDvV~l~~p~~~~t-  207 (311)
T 2cuk_A          140 LDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-------YPFLSLEEL----LKEADVVSLHTPLTPET-  207 (311)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-------SCBCCHHHH----HHHCSEEEECCCCCTTT-
T ss_pred             cCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-------cccCCHHHH----HhhCCEEEEeCCCChHH-
Confidence            467899999999999999999999999999999999875532       111223222    23479999999875211 


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHH
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEE  491 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~  491 (616)
                       . ..+..   ..++++.+++|+.-.+. .+.-+.+|-+
T Consensus       208 -~-~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~  244 (311)
T 2cuk_A          208 -H-RLLNRERLFAMKRGAILLNTARGALVDTEALVEALR  244 (311)
T ss_dssp             -T-TCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred             -H-hhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence             1 12322   24577889999987654 3333444545

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.74  E-value=0.0012  Score=65.72  Aligned_cols=67  Identities=18%  Similarity=0.234  Sum_probs=53.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC----eEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA----RVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~----~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~g  452 (616)
                      +++.|+|+|.+|.+++..|.+.|.    +|++++|+.+++++++++++.... +..+.    ..++|+||-+++..
T Consensus         3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~----~~~aDvVilav~~~   74 (247)
T 3gt0_A            3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEV----AKNADILILSIKPD   74 (247)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHH----HHHCSEEEECSCTT
T ss_pred             CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHH----HHhCCEEEEEeCHH
Confidence            579999999999999999999997    999999999999999888765432 22221    22479999999653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.73  E-value=0.0013  Score=70.30  Aligned_cols=64  Identities=20%  Similarity=0.122  Sum_probs=45.2

Q ss_pred             EEEEecCHHHHHHHHHhhhc--ccCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHH-CCCeEEEEECCHH
Q 007151          347 LFGYNTDYVGAISAIEDGLR--GRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYD  415 (616)
Q Consensus       347 l~G~NTD~~G~~~~L~~~l~--~~~~~~~~~~~~l~~k~vlVlGA-GGagrAia~~L~~-~G~~V~v~nRt~~  415 (616)
                      ++-.|+--.|..+..++.+.  +..+     .....+|++||+|+ +|+|+|++..|++ .|++|.+++|+.+
T Consensus        16 ~~~~~~hp~gc~~~v~~qi~~~~~~~-----~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~   83 (405)
T 3zu3_A           16 FICVTAHPTGCEANVKKQIDYVTTEG-----PIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERP   83 (405)
T ss_dssp             TEECCCCHHHHHHHHHHHHHHHHHHC-----CCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             eeecCCCCHHHHHHHHHHHHHHHhcC-----CcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCch
Confidence            55567777777666554321  0000     12245799999998 5999999999999 9999999988643

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=96.73  E-value=0.0013  Score=67.92  Aligned_cols=111  Identities=14%  Similarity=0.095  Sum_probs=72.4

Q ss_pred             EEEEEccchhHH-HHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGK-ALAYGAKAK-GARVVIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       383 ~vlVlGAGGagr-Aia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++.|+|+|.+|+ +.+..|.+. +++|++++|+.+++++++++++..  ..+..+.  + ..+.|+|+.+||.....   
T Consensus         4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~--l-~~~~D~V~i~tp~~~h~---   77 (323)
T 1xea_A            4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDV--L-QYGVDAVMIHAATDVHS---   77 (323)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGG--G-GGCCSEEEECSCGGGHH---
T ss_pred             EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHH--h-hcCCCEEEEECCchhHH---
Confidence            789999999998 588888775 567779999999999999998754  2232221  1 14589999999964321   


Q ss_pred             CCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          459 ETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       459 ~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                        ++....++.+ .++++  +..++.+ ..+.+.|++.|..+..|..
T Consensus        78 --~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~  122 (323)
T 1xea_A           78 --TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFN  122 (323)
T ss_dssp             --HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred             --HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeec
Confidence              1222334444 35444  2222222 3456677788887776654

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.72  E-value=0.00037  Score=73.27  Aligned_cols=114  Identities=26%  Similarity=0.241  Sum_probs=61.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..|...|.+|++++|+.++.      .+..  ...++.+ ...++|+|+.++|....  
T Consensus       167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~------~~~~--~~~sl~e-ll~~aDvVil~vP~t~~--  235 (340)
T 4dgs_A          167 HSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG------VDWI--AHQSPVD-LARDSDVLAVCVAASAA--  235 (340)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT------SCCE--ECSSHHH-HHHTCSEEEECC-------
T ss_pred             ccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc------cCce--ecCCHHH-HHhcCCEEEEeCCCCHH--
Confidence            46889999999999999999999999999999999986541      1111  1112222 23457999998886421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|+++
T Consensus       236 t-~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV  284 (340)
T 4dgs_A          236 T-QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDV  284 (340)
T ss_dssp             ------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESC
T ss_pred             H-HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCC
Confidence            1 1123222   3466778888876543 344444454545333334443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.72  E-value=0.0039  Score=63.40  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++.+.+.+.
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~   45 (316)
T 2ew2_A            4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN   45 (316)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence            479999999999999999999999999999999998888765

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.71  E-value=0.0031  Score=69.39  Aligned_cols=92  Identities=22%  Similarity=0.190  Sum_probs=66.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.|++|+|+|+|++|+.++..+...|++|++++|++++++.. .+.+....+++++    ..++|+||.+++...    
T Consensus       271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-~~~Ga~~~~l~e~----l~~aDvVi~atgt~~----  341 (494)
T 3ce6_A          271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-MMEGFDVVTVEEA----IGDADIVVTATGNKD----  341 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEECCHHHH----GGGCSEEEECSSSSC----
T ss_pred             CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCEEecHHHH----HhCCCEEEECCCCHH----
Confidence            4679999999999999999999999999999999999887553 4555544444432    245899999986321    


Q ss_pred             CCCcccc---ccccCccEEEEEeeCCc
Q 007151          458 DETPIPK---HALGHYALVFDAVYTPK  481 (616)
Q Consensus       458 ~~~pi~~---~~l~~~~~v~Di~Y~P~  481 (616)
                         .+..   ..++++.+++++...+.
T Consensus       342 ---~i~~~~l~~mk~ggilvnvG~~~~  365 (494)
T 3ce6_A          342 ---IIMLEHIKAMKDHAILGNIGHFDN  365 (494)
T ss_dssp             ---SBCHHHHHHSCTTCEEEECSSSGG
T ss_pred             ---HHHHHHHHhcCCCcEEEEeCCCCC
Confidence               1221   23566777888776543

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.71  E-value=0.003  Score=69.22  Aligned_cols=68  Identities=28%  Similarity=0.331  Sum_probs=50.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTT  449 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat  449 (616)
                      ..+.||+++|+|.|.+|+++|..|...|++|++++|+..++.... ..+....++++    ...++|+||.++
T Consensus       253 ~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~~~~l~e----ll~~aDiVi~~~  320 (479)
T 1v8b_A          253 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFNVVTLDE----IVDKGDFFITCT  320 (479)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCEECCHHH----HTTTCSEEEECC
T ss_pred             cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCEecCHHH----HHhcCCEEEECC
Confidence            367899999999999999999999999999999999998764322 22333333332    234578888775

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.70  E-value=0.0004  Score=71.22  Aligned_cols=110  Identities=17%  Similarity=0.121  Sum_probs=72.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .+++.|+|+|.+|++++..|++.|++|++++|++++++++.+. +...  ..+..+ ... +|+||-++|....  ... 
T Consensus        15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~--~~~~~~-~~~-aDvvi~~vp~~~~--~~~-   86 (296)
T 3qha_A           15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GATL--ADSVAD-VAA-ADLIHITVLDDAQ--VRE-   86 (296)
T ss_dssp             CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCEE--CSSHHH-HTT-SSEEEECCSSHHH--HHH-
T ss_pred             CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCEE--cCCHHH-HHh-CCEEEEECCChHH--HHH-
Confidence            3579999999999999999999999999999999998887653 3222  122222 234 8999999985311  000 


Q ss_pred             ccc--cccccCccEEEEEeeCCccc-H-HHHHHHHcCCeEEc
Q 007151          461 PIP--KHALGHYALVFDAVYTPKIT-R-LLREAEESGATIVS  498 (616)
Q Consensus       461 pi~--~~~l~~~~~v~Di~Y~P~~T-~-ll~~A~~~G~~~i~  498 (616)
                      -+.  ...+.++.+++|..-.+..+ . +.+..+++|..+++
T Consensus        87 v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~  128 (296)
T 3qha_A           87 VVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD  128 (296)
T ss_dssp             HHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            010  11356778999998765443 2 33334456776553

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=96.70  E-value=0.0017  Score=67.05  Aligned_cols=113  Identities=12%  Similarity=0.075  Sum_probs=72.5

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.|+++.|+|.|.+|+++|..|...|++|++++|+.+  +.     +..  ...++.+ ...++|+|+.++|....  +
T Consensus       121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~-----~~~--~~~~l~e-ll~~aDvV~l~~P~~~~--t  188 (303)
T 1qp8_A          121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG-----PWR--FTNSLEE-ALREARAAVCALPLNKH--T  188 (303)
T ss_dssp             CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS-----SSC--CBSCSHH-HHTTCSEEEECCCCSTT--T
T ss_pred             CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc-----Ccc--cCCCHHH-HHhhCCEEEEeCcCchH--H
Confidence            57899999999999999999999999999999999865  11     111  1122222 23468999999997521  1


Q ss_pred             CCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ...+..   ..++++.+++|+.-.+. ++.-+.+|-+.|...--|++.+
T Consensus       189 -~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~  237 (303)
T 1qp8_A          189 -RGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW  237 (303)
T ss_dssp             -TTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred             -HHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence             112332   23577889999987654 3333344444432222344443

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.69  E-value=0.0035  Score=63.06  Aligned_cols=88  Identities=19%  Similarity=0.137  Sum_probs=60.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++.|+|+|.+|.+++..|.+.|.+|++++|+.++++.+. +.+.......+..+ . .++|+||.++|......    .+
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~-~~~D~vi~av~~~~~~~----~~   74 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDLSL-L-QTAKIIFLCTPIQLILP----TL   74 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCGGG-G-TTCSEEEECSCHHHHHH----HH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCCccccCCHHH-h-CCCCEEEEECCHHHHHH----HH
Confidence            689999999999999999999999999999999988875 44432111223333 2 56899999998532110    01


Q ss_pred             c--cccccCccEEEEEe
Q 007151          463 P--KHALGHYALVFDAV  477 (616)
Q Consensus       463 ~--~~~l~~~~~v~Di~  477 (616)
                      .  ...+++..+++|+.
T Consensus        75 ~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           75 EKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHGGGSCTTCEEEECC
T ss_pred             HHHHhhCCCCCEEEECC
Confidence            1  11345667888873

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.69  E-value=0.0032  Score=63.57  Aligned_cols=93  Identities=12%  Similarity=0.090  Sum_probs=62.3

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCC-CccEEEEcCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPE-DGMILANTTSIGMQPKVD  458 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~-~~divInat~~gm~p~~~  458 (616)
                      +++.|+|+|.+|.+++..|.+.|.  +|++++|+.++.+.+. +.+.......+..+ ... ++|+||.|+|......  
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~aDvVilavp~~~~~~--   77 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK-VEDFSPDFVMLSSPVRTFRE--   77 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG-GGGTCCSEEEECSCHHHHHH--
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccccCCHHH-HhcCCCCEEEEcCCHHHHHH--
Confidence            479999999999999999999998  8999999999877654 44432101122222 234 6899999998642210  


Q ss_pred             CCcccc--ccccCccEEEEEeeCC
Q 007151          459 ETPIPK--HALGHYALVFDAVYTP  480 (616)
Q Consensus       459 ~~pi~~--~~l~~~~~v~Di~Y~P  480 (616)
                        -+..  ..+++..+++|+.-.+
T Consensus        78 --v~~~l~~~l~~~~iv~~~~~~~   99 (281)
T 2g5c_A           78 --IAKKLSYILSEDATVTDQGSVK   99 (281)
T ss_dssp             --HHHHHHHHSCTTCEEEECCSCC
T ss_pred             --HHHHHHhhCCCCcEEEECCCCc
Confidence              0111  1245667888876543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.68  E-value=0.00093  Score=68.77  Aligned_cols=73  Identities=22%  Similarity=0.271  Sum_probs=49.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc-CCCCccEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF-NPEDGMILA  446 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~-~~~~~divI  446 (616)
                      .+++++|+|+ |++|++++..|.+.|++|++++|+.++..+..+.+    +...    .++.+   +.++ .....|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            3679999997 89999999999999999999999765444433332    2211    23322   2221 112589999


Q ss_pred             EcCCCC
Q 007151          447 NTTSIG  452 (616)
Q Consensus       447 nat~~g  452 (616)
                      |+++..
T Consensus        84 h~A~~~   89 (341)
T 3enk_A           84 HFAALK   89 (341)
T ss_dssp             ECCCCC
T ss_pred             ECcccc
Confidence            999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=96.68  E-value=0.0021  Score=61.29  Aligned_cols=70  Identities=20%  Similarity=0.219  Sum_probs=50.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .+++|+|+|+ ||+|++++..+...|++|++++|+.++.+.+ .+++... ++..+      +.+. ....+|++||+++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            5789999995 9999999999999999999999998877654 3455322 22211      1110 1235899999986

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.67  E-value=0.0014  Score=66.83  Aligned_cols=67  Identities=19%  Similarity=0.315  Sum_probs=53.5

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA---RVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~---~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~  451 (616)
                      .+++.|||+|.+|.+++..|.+.|.   +|++++|+.+++++++++++.... +..+    ...++|+||-+++.
T Consensus         3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~----~~~~aDvVilav~p   73 (280)
T 3tri_A            3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQ----GALNADVVVLAVKP   73 (280)
T ss_dssp             CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHH----HHSSCSEEEECSCG
T ss_pred             CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHH----HHhcCCeEEEEeCH
Confidence            3679999999999999999999998   899999999999999887664432 2221    12457999998864

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=96.67  E-value=0.0016  Score=68.46  Aligned_cols=107  Identities=20%  Similarity=0.176  Sum_probs=73.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..|...|++|+.++|+.++.  . +. .....+++++    ..++|+|+.++|..-  .
T Consensus       144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~-~~-~~~~~~l~el----l~~aDvV~l~~Plt~--~  213 (343)
T 2yq5_A          144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--F-EP-FLTYTDFDTV----LKEADIVSLHTPLFP--S  213 (343)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--G-TT-TCEECCHHHH----HHHCSEEEECCCCCT--T
T ss_pred             cccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--h-hc-cccccCHHHH----HhcCCEEEEcCCCCH--H
Confidence            46889999999999999999999999999999999986541  1 00 1122233332    335899999999742  1


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCC
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGA  494 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~  494 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|.
T Consensus       214 t-~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~  254 (343)
T 2yq5_A          214 T-ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGE  254 (343)
T ss_dssp             T-TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred             H-HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCC
Confidence            1 1224333   3578899999987654 4555555655553

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=96.66  E-value=0.0013  Score=72.65  Aligned_cols=113  Identities=20%  Similarity=0.182  Sum_probs=74.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-HH---CCcc-cchhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-TV---GGHA-LSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~-~~---~~~~-~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..++.|+|+|.||.+++..|++.|.+|+++||+.++++++.+ ..   +... .+.+++.. .+..+|+||-++|.+.. 
T Consensus        10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~-~l~~aDvVil~Vp~~~~-   87 (497)
T 2p4q_A           10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFIS-KLKRPRKVMLLVKAGAP-   87 (497)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHH-TSCSSCEEEECCCSSHH-
T ss_pred             CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHh-cCCCCCEEEEEcCChHH-
Confidence            357999999999999999999999999999999999999887 32   1111 12333221 23348999999987521 


Q ss_pred             CCCCCccc--cccccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEE
Q 007151          456 KVDETPIP--KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIV  497 (616)
Q Consensus       456 ~~~~~pi~--~~~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i  497 (616)
                       .+. -+.  ...++++.+++|+.-... .| .+.+..+++|..++
T Consensus        88 -v~~-vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v  131 (497)
T 2p4q_A           88 -VDA-LINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFV  131 (497)
T ss_dssp             -HHH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             -HHH-HHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCcee
Confidence             010 011  123566789999875433 33 23444456677654

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0023  Score=66.28  Aligned_cols=114  Identities=18%  Similarity=0.210  Sum_probs=75.2

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GARVV-IANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      .++.|+|+|.+|+..+..|.+. +++++ +++|+.+++++++++++..+-+++++-+  ..+.|+|+.+||...+.    
T Consensus         4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~----   77 (331)
T 4hkt_A            4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEA--AADIDAVVICTPTDTHA----   77 (331)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHH--CTTCCEEEECSCGGGHH----
T ss_pred             eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhc--CCCCCEEEEeCCchhHH----
Confidence            4799999999999999999986 66654 8999999999999998765334444322  23589999999865432    


Q ss_pred             CccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHH
Q 007151          460 TPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       460 ~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~M  502 (616)
                       ++....++.+. ++++  +..++.+ -.+.+.|+++|..+.-|..+
T Consensus        78 -~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~  123 (331)
T 4hkt_A           78 -DLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNR  123 (331)
T ss_dssp             -HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred             -HHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccc
Confidence             12223344333 3333  1122222 34566777888877766553

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.64  E-value=0.0032  Score=63.84  Aligned_cols=66  Identities=12%  Similarity=0.138  Sum_probs=51.3

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      +++.|+|+ |.+|++++..|.+.|.+|++++|+.++++.+.+ .+....   +..+ ...++|+||.++|..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~~~---~~~~-~~~~aDvVi~av~~~   78 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGIPLT---DGDG-WIDEADVVVLALPDN   78 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTCCCC---CSSG-GGGTCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCCCcC---CHHH-HhcCCCEEEEcCCch
Confidence            58999999 999999999999999999999999999888765 442221   2222 234579999888753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.64  E-value=0.0027  Score=65.85  Aligned_cols=72  Identities=25%  Similarity=0.321  Sum_probs=55.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------ccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~~~~~~divInat~~  451 (616)
                      .|++|+|+|+ ||+|.+++..++..|++|+++.|+.++.+.++++++... ++..+      +.+.....+|++||+++.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG  228 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence            5789999998 999999999999999999999999999888867777542 22211      111122468999999883

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.63  E-value=0.005  Score=58.46  Aligned_cols=62  Identities=21%  Similarity=0.259  Sum_probs=41.9

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhccccc--CCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--NPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~--~~~~~divInat~~g  452 (616)
                      +++|+|+ ||+|++++..|. .|++|++++|+.+       .+.....+.+++.++  ..+..|+|||+++..
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            7999998 799999999999 9999999999753       010111111111110  113579999999864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.63  E-value=0.00022  Score=70.12  Aligned_cols=70  Identities=13%  Similarity=0.110  Sum_probs=48.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCc--ccchhc---ccccCCCCccEEEEcCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGH--ALSLAD---LENFNPEDGMILANTTS  450 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~--~~~~~~---l~~~~~~~~divInat~  450 (616)
                      ...|+++|+|+ |++|++++..|.+.| ++|+++.|+.++++++... +..  ..++.+   +.+ ...+.|+|||+++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~-~~~~~D~vv~~a~   97 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT-NSQIIMGDVLNHAALKQ-AMQGQDIVYANLT   97 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCT-TEEEEECCTTCHHHHHH-HHTTCSEEEEECC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccC-CcEEEEecCCCHHHHHH-HhcCCCEEEEcCC
Confidence            34589999997 899999999999999 7999999998765433210 011  123322   222 2346799998876

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.63  E-value=0.0019  Score=67.81  Aligned_cols=116  Identities=20%  Similarity=0.196  Sum_probs=75.9

Q ss_pred             cCCcEEEEEccchhHH-HHHHHHHHC-CCeE-EEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGK-ALAYGAKAK-GARV-VIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       379 l~~k~vlVlGAGGagr-Aia~~L~~~-G~~V-~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      .+..++.|+|+|.+|+ ..+.+|.+. +++| .|++|+.+++++++++++.... +++++-+  ..+.|+|+.+||...+
T Consensus        25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~--~~~~D~V~i~tp~~~h  102 (350)
T 3rc1_A           25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLE--RDDVDAVYVPLPAVLH  102 (350)
T ss_dssp             -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHT--CTTCSEEEECCCGGGH
T ss_pred             CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhc--CCCCCEEEECCCcHHH
Confidence            3446899999999998 788889887 5665 5899999999999999986542 4444322  2468999999996543


Q ss_pred             CCCCCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          455 PKVDETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                      .     ++....++.+. ++++  +..++.+ -.+.+.|+++|..+.-|..
T Consensus       103 ~-----~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~  148 (350)
T 3rc1_A          103 A-----EWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFM  148 (350)
T ss_dssp             H-----HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred             H-----HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEec
Confidence            2     12223444443 4433  1112222 3456677788887766654

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=96.63  E-value=0.0031  Score=67.19  Aligned_cols=117  Identities=21%  Similarity=0.262  Sum_probs=74.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC-
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP-  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p-  455 (616)
                      ..+.|+++.|+|.|.+|++++..|...|++|++++|+.+..     ..+....+++++    ..++|+|+.++|..... 
T Consensus       112 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-----~~g~~~~~l~el----l~~aDvV~l~~Plt~~g~  182 (380)
T 2o4c_A          112 ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR-----EPDGEFVSLERL----LAEADVISLHTPLNRDGE  182 (380)
T ss_dssp             CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH-----STTSCCCCHHHH----HHHCSEEEECCCCCSSSS
T ss_pred             cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh-----ccCcccCCHHHH----HHhCCEEEEeccCccccc
Confidence            46889999999999999999999999999999999876432     122222333332    23479999999875320 


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      ......+...   .++++.+++|+.-.+. .+.-+.+|-+.|...--++++
T Consensus       183 ~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV  233 (380)
T 2o4c_A          183 HPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDV  233 (380)
T ss_dssp             SCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred             cchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeee
Confidence            0011123332   3567788999887644 445455555555433334443

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=96.62  E-value=0.00083  Score=70.37  Aligned_cols=117  Identities=18%  Similarity=0.111  Sum_probs=80.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|+++|..|...|++|++++|+.++.  + +.. ....+++++    ..++|+|+.++|....  
T Consensus       141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~~~l~el----l~~aDvV~~~~P~~~~--  210 (333)
T 1dxy_A          141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-FDYVSLEDL----FKQSDVIDLHVPGIEQ--  210 (333)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-CEECCHHHH----HHHCSEEEECCCCCGG--
T ss_pred             cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-cccCCHHHH----HhcCCEEEEcCCCchh--
Confidence            46889999999999999999999999999999999986542  1 111 112233222    2357999999997421  


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHHH
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                      + ...+..   ..++++.+++|+.-.+. ++.-+.+|-+.|...--|++++-
T Consensus       211 t-~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~  261 (333)
T 1dxy_A          211 N-THIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE  261 (333)
T ss_dssp             G-TTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred             H-HHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCC
Confidence            1 112332   23578889999988644 56666777777766556677654

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.62  E-value=0.0019  Score=67.61  Aligned_cols=90  Identities=22%  Similarity=0.187  Sum_probs=63.5

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++++++.|+|+|.+|++++..|.+.|.+|++++|+.+++.+.+.+.+....+.++.    ..++|+||.++|......  
T Consensus        14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~----~~~aDvVilavp~~~~~~--   87 (338)
T 1np3_A           14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTA----VAAADVVMILTPDEFQGR--   87 (338)
T ss_dssp             HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHH----HHTCSEEEECSCHHHHHH--
T ss_pred             hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHH----HhcCCEEEEeCCcHHHHH--
Confidence            45788999999999999999999999999999999877667777666433233221    235799999998653211  


Q ss_pred             CCccc-c--ccccCccEEEEE
Q 007151          459 ETPIP-K--HALGHYALVFDA  476 (616)
Q Consensus       459 ~~pi~-~--~~l~~~~~v~Di  476 (616)
                        .+. .  ..++++.+++|+
T Consensus        88 --v~~~~i~~~l~~~~ivi~~  106 (338)
T 1np3_A           88 --LYKEEIEPNLKKGATLAFA  106 (338)
T ss_dssp             --HHHHHTGGGCCTTCEEEES
T ss_pred             --HHHHHHHhhCCCCCEEEEc
Confidence              111 1  135566777776

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.61  E-value=0.0019  Score=65.19  Aligned_cols=108  Identities=19%  Similarity=0.157  Sum_probs=69.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      ++.|+|+|.+|++++..|.+ |++|++++|+.++++.+.+. +....+   ..+ ...++|+||.++|....  ... -+
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-g~~~~~---~~~-~~~~~D~vi~~v~~~~~--~~~-v~   73 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-FGSEAV---PLE-RVAEARVIFTCLPTTRE--VYE-VA   73 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-HCCEEC---CGG-GGGGCSEEEECCSSHHH--HHH-HH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-CCcccC---HHH-HHhCCCEEEEeCCChHH--HHH-HH
Confidence            68999999999999999999 99999999999998888765 322222   222 23458999999985321  000 01


Q ss_pred             c--cccccCccEEEEEeeCCcc-c-HHHHHHHHcCCeEEcc
Q 007151          463 P--KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIVSG  499 (616)
Q Consensus       463 ~--~~~l~~~~~v~Di~Y~P~~-T-~ll~~A~~~G~~~i~G  499 (616)
                      .  ...+.++.+++|+...... + .+.+..++.|..+++.
T Consensus        74 ~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~  114 (289)
T 2cvz_A           74 EALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA  114 (289)
T ss_dssp             HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC
T ss_pred             HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence            0  1235567888888654322 2 2333444556665543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.61  E-value=0.0025  Score=65.26  Aligned_cols=39  Identities=36%  Similarity=0.405  Sum_probs=36.3

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      ++|.|+|+|.+|.+++..|++.|++|++++|+.++++..
T Consensus        16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            689999999999999999999999999999999887764

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.60  E-value=0.0009  Score=70.12  Aligned_cols=105  Identities=20%  Similarity=0.192  Sum_probs=69.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.|+++.|+|.|.+|++++..|...|.+|++++|+.++.+      +...  ..++.+ ...++|+|+.++|..... 
T Consensus       160 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~------g~~~--~~~l~e-ll~~aDvVil~vP~~~~t-  229 (333)
T 3ba1_A          160 TKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT------NYTY--YGSVVE-LASNSDILVVACPLTPET-  229 (333)
T ss_dssp             CCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC------CSEE--ESCHHH-HHHTCSEEEECSCCCGGG-
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc------Ccee--cCCHHH-HHhcCCEEEEecCCChHH-
Confidence            467899999999999999999999999999999999865421      2111  112222 134589999999974211 


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                        ...+..   ..++++.+++|+.-.+. .+.-+.+|-+.|
T Consensus       230 --~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g  268 (333)
T 3ba1_A          230 --THIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEG  268 (333)
T ss_dssp             --TTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred             --HHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence              112322   23567788999887644 344455554544

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=96.58  E-value=0.012  Score=62.75  Aligned_cols=181  Identities=18%  Similarity=0.271  Sum_probs=105.3

Q ss_pred             cCCCeeEeccCcccHHHHHHHhc--cCCCCeEEEcccchHHHHhhhccccHhHhhhcceeEEEEeccCCeEEEEecCHH-
Q 007151          279 VGFNGVFVHLLVDDIAKFFQTYS--SNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYV-  355 (616)
Q Consensus       279 lgl~~~Y~~~~~~~l~~~~~~l~--~~~~~G~nVT~P~K~~v~~~lD~ls~~A~~iGAVNTIv~~~~dg~l~G~NTD~~-  355 (616)
                      -|+|..=..+++.+.+++++.++  .+.|.|+|.--=-..+.++.++++-..      .          .+-=+|-|-. 
T Consensus       103 agid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~~~p~~f~il~~~r~~------~----------~ipvf~DDiqG  166 (398)
T 2a9f_A          103 AGVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDISAPRCFEIEQRLIKE------C----------HIPVFHDDQHG  166 (398)
T ss_dssp             SSCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSCCTTHHHHHHHHHHHH------C----------SSCEEEHHHHH
T ss_pred             cCCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccCCChHHHHHHHHhhhc------C----------Ccceecchhhh
Confidence            46774444456667888877664  478999887531133444555443322      1          1223344423 


Q ss_pred             -------HHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH----HH---HH--
Q 007151          356 -------GAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY----DR---AR--  418 (616)
Q Consensus       356 -------G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~----~k---a~--  418 (616)
                             |++++++  +.         +..+++.+++|+|||-+|.+++..+...|+ +|++++|+-    ++   ..  
T Consensus       167 Ta~V~lAall~al~--l~---------g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~  235 (398)
T 2a9f_A          167 TAIVVLAAIFNSLK--LL---------KKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPH  235 (398)
T ss_dssp             HHHHHHHHHHHHHH--TT---------TCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC-
T ss_pred             HHHHHHHHHHHHHH--Hh---------CCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHH
Confidence                   3344433  21         246788899999999999999999999999 999999962    11   11  


Q ss_pred             --HHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcccccc---ccCccEEEEEeeCCc--ccHHHHHHHH
Q 007151          419 --ELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHA---LGHYALVFDAVYTPK--ITRLLREAEE  491 (616)
Q Consensus       419 --~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~---l~~~~~v~Di~Y~P~--~T~ll~~A~~  491 (616)
                        .++...+. ......+.+ ...++|++|-++..+.        +.++.   ..++.++|++. ||.  -||  ++|.+
T Consensus       236 k~~fa~~~~~-~~~~~~L~e-av~~ADV~IG~Sapgl--------~T~EmVk~Ma~~pIIfals-NPt~E~~p--e~a~~  302 (398)
T 2a9f_A          236 HLDIAKVTNR-EFKSGTLED-ALEGADIFIGVSAPGV--------LKAEWISKMAARPVIFAMA-NPIPEIYP--DEALE  302 (398)
T ss_dssp             --CHHHHHSC-TTCCCSCSH-HHHTTCSEEECCSTTC--------CCHHHHHTSCSSCEEEECC-SSSCSSCH--HHHHT
T ss_pred             HHHHhhccCc-ccchhhHHH-HhccCCEEEecCCCCC--------CCHHHHHhhCCCCEEEECC-CCCccCCH--HHHHH
Confidence              12222210 001111222 2335799997754332        33332   35788999998 443  466  66766


Q ss_pred             cCC-eEEcc
Q 007151          492 SGA-TIVSG  499 (616)
Q Consensus       492 ~G~-~~i~G  499 (616)
                      .|. .+..|
T Consensus       303 ~g~~i~atG  311 (398)
T 2a9f_A          303 AGAYIVGTG  311 (398)
T ss_dssp             TTCSEEEES
T ss_pred             hCCeEEEeC
Confidence            664 34455

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.58  E-value=0.00019  Score=71.97  Aligned_cols=68  Identities=18%  Similarity=0.126  Sum_probs=47.8

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      .+|+++|+|| |++|++++..|.+.|++|++.+|+.++.+    ..+...  .++.+   +.. ...+.|+|||+++..
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~Ag~~   75 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNA-MVAGCDGIVHLGGIS   75 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHH-HHTTCSEEEECCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHH-HHcCCCEEEECCCCc
Confidence            3578999997 89999999999999999999999865432    000111  23322   222 234689999999863

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.57  E-value=0.0091  Score=62.01  Aligned_cols=95  Identities=18%  Similarity=0.112  Sum_probs=58.7

Q ss_pred             CcEEEEEccchhHHH-HHHHHHHCCCeEEEEECCHH--HHHHHHHHHCCcccchhcccccCC-CCccEEEEcCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYD--RARELAETVGGHALSLADLENFNP-EDGMILANTTSIGMQPK  456 (616)
Q Consensus       381 ~k~vlVlGAGGagrA-ia~~L~~~G~~V~v~nRt~~--ka~~la~~~~~~~~~~~~l~~~~~-~~~divInat~~gm~p~  456 (616)
                      .|++.|+|.||+|.+ +|..|.++|++|++++++..  ..+.|.+ .+.....=.+... .. .++|+||-+.+      
T Consensus         4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~-~gi~v~~g~~~~~-l~~~~~d~vV~Spg------   75 (326)
T 3eag_A            4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEA-LGIDVYEGFDAAQ-LDEFKADVYVIGNV------   75 (326)
T ss_dssp             CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHH-TTCEEEESCCGGG-GGSCCCSEEEECTT------
T ss_pred             CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHh-CCCEEECCCCHHH-cCCCCCCEEEECCC------
Confidence            478999999999996 88889999999999998642  2333322 1211100000000 00 12344432211      


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIG  505 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~  505 (616)
                                            -|...|.+++|+++|++++.-.+++.+
T Consensus        76 ----------------------i~~~~p~~~~a~~~gi~v~~~~e~~~~  102 (326)
T 3eag_A           76 ----------------------AKRGMDVVEAILNLGLPYISGPQWLSE  102 (326)
T ss_dssp             ----------------------CCTTCHHHHHHHHTTCCEEEHHHHHHH
T ss_pred             ----------------------cCCCCHHHHHHHHcCCcEEeHHHHHHH
Confidence                                  134578889999999999988887653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.55  E-value=0.004  Score=64.53  Aligned_cols=202  Identities=15%  Similarity=0.132  Sum_probs=106.9

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .+++.|||+|.+|.+++..|.+.|.  +|++++|+.++++.+. +.+.......+..+....++|+||.|+|.....   
T Consensus        33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~---  108 (314)
T 3ggo_A           33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFR---  108 (314)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCTTGGGGGCCSEEEECSCGGGHH---
T ss_pred             CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCCHHHHhhccCCEEEEeCCHHHHH---
Confidence            4789999999999999999999998  9999999998877754 333311011122110124589999999965321   


Q ss_pred             CCcccc--ccccCccEEEEEeeCCcccHHHHHHHHc-CCeEEccHHHHHHH--H--HHHHHHHcCCC---CC--CchHHH
Q 007151          459 ETPIPK--HALGHYALVFDAVYTPKITRLLREAEES-GATIVSGLEMFIGQ--A--YEQYERFTGLP---GK--MNAPHL  526 (616)
Q Consensus       459 ~~pi~~--~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~~~i~Gl~MLv~Q--a--~~qf~lwtG~~---~p--~~~~~l  526 (616)
                       .-+..  ..++++.+++|+.-.+  +..++..++. +..++.+-.|.--.  +  ...-.+|.|..   .|  ....  
T Consensus       109 -~vl~~l~~~l~~~~iv~d~~Svk--~~~~~~~~~~l~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~--  183 (314)
T 3ggo_A          109 -EIAKKLSYILSEDATVTDQGSVK--GKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDK--  183 (314)
T ss_dssp             -HHHHHHHHHSCTTCEEEECCSCC--THHHHHHHHHHGGGEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCH--
T ss_pred             -HHHHHHhhccCCCcEEEECCCCc--HHHHHHHHHhcCCCEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCH--
Confidence             01111  1356778999986543  2233333321 11566555544200  0  00012333431   11  1111  


Q ss_pred             HHHHHHHHhhcccccceecccccCCccchhchhhhhhcCceeehhhHHHHHHHHHHHhhhhccc--eeeEeeecccccc
Q 007151          527 YKFFVLLLYSFNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSVWSIHYMLLILFSSVIQHEA--SLFIFFFGQKYKR  603 (616)
Q Consensus       527 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  603 (616)
                       +.++.++.+.+.+          |+.. -.+=.+.|.+..-+.--.-|++...|...+.+++.  ....-|.++-|+.
T Consensus       184 -~~~~~v~~l~~~~----------G~~v-~~~~~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~frd  250 (314)
T 3ggo_A          184 -KRLKLVKRVWEDV----------GGVV-EYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKD  250 (314)
T ss_dssp             -HHHHHHHHHHHHT----------TCEE-EECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTTT
T ss_pred             -HHHHHHHHHHHHc----------CCEE-EEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHHH
Confidence             2222222223322          3211 11224555555555666678877777777766542  2233345565553

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.54  E-value=0.0034  Score=66.15  Aligned_cols=71  Identities=23%  Similarity=0.302  Sum_probs=55.5

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh---cccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA---DLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~---~l~~~~~~~~divInat~~  451 (616)
                      .|++|+|+|+|++|.+++..+...|++|+++.|+.++.+.+.++++... ++..   .+.+ ....+|++|++++.
T Consensus       187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~-~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQA-AAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHH-TTTCEEEEEECCSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHH-hhCCCCEEEECCCc
Confidence            5789999999999999999999999999999999888777666777542 3332   2222 23468999999985

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.52  E-value=0.0021  Score=65.00  Aligned_cols=71  Identities=13%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-------HHHHHHHH--HHCCcc--cchhc---ccccCCCCccEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-------DRARELAE--TVGGHA--LSLAD---LENFNPEDGMIL  445 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-------~ka~~la~--~~~~~~--~~~~~---l~~~~~~~~div  445 (616)
                      +++++|+|| |++|++++.+|.+.|++|+++.|+.       ++++.+.+  ..+...  .++.+   +.. ...+.|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~-~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVK-AIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH-HHhCCCEE
Confidence            467999998 8999999999999999999999986       66655432  112222  23332   222 24468999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        81 i~~a~~~   87 (307)
T 2gas_A           81 ICAAGRL   87 (307)
T ss_dssp             EECSSSS
T ss_pred             EECCccc
Confidence            9998753

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.51  E-value=0.0049  Score=64.02  Aligned_cols=72  Identities=21%  Similarity=0.211  Sum_probs=54.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc---c----cccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---L----ENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~---l----~~~~~~~~divInat~  450 (616)
                      .|++|+|+|+ ||+|++++..+...|++|+++.|+.++.+.+.++++... ++..+   +    .+.....+|++||+++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence            5789999997 999999999999999999999999988877765666532 23321   1    1111235899999987


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       235 ~  235 (345)
T 2j3h_A          235 G  235 (345)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.51  E-value=0.0023  Score=67.30  Aligned_cols=71  Identities=17%  Similarity=0.184  Sum_probs=52.9

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCcccchhc-ccc-c--CCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHALSLAD-LEN-F--NPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~~~~~~~-l~~-~--~~~~~divInat~~  451 (616)
                      ++|++|+|+|+|++|.+++..+...|++|++++|+.   ++. +++++++...++ .+ +.+ +  ....+|++||+++.
T Consensus       179 ~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v~-~~~~~~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          179 LNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEETKTNYYN-SSNGYDKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             STTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHHTCEEEE-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHhCCceec-hHHHHHHHHHhCCCCCEEEECCCC
Confidence            348999999999999999999999999999999987   776 556677754332 21 100 0  01458999999985

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.51  E-value=0.002  Score=67.47  Aligned_cols=113  Identities=14%  Similarity=0.135  Sum_probs=74.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCe-EEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GAR-VVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~-V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .++.|+|+|.+|+..+.+|.+. |++ +.+++|+.+++++++++++... -+++++-+  ..+.|+|+.+||...+.   
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~---   80 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLA--REDVEMVIITVPNDKHA---   80 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHH--CSSCCEEEECSCTTSHH---
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhc--CCCCCEEEEeCChHHHH---
Confidence            4899999999999999999887 666 5589999999999999987643 23444321  24589999999975432   


Q ss_pred             CCccccccccCcc-EEEEE--eeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          459 ETPIPKHALGHYA-LVFDA--VYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       459 ~~pi~~~~l~~~~-~v~Di--~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                        ++....++.+. ++++=  ..++.+ -.+.+.|+++|..+.-|..
T Consensus        81 --~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~  125 (354)
T 3db2_A           81 --EVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS  125 (354)
T ss_dssp             --HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG
T ss_pred             --HHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec
Confidence              12223344443 44331  111111 3455667778887766654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.50  E-value=0.00053  Score=70.70  Aligned_cols=75  Identities=17%  Similarity=0.210  Sum_probs=50.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cc--cchhc---ccccCCC--CccEEEE
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HA--LSLAD---LENFNPE--DGMILAN  447 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~--~~~~~---l~~~~~~--~~divIn  447 (616)
                      .++++++++|+|+ |++|++++..|.+.|++|++++|+.+...++.+.+.. ..  .++.+   +.+ ...  +.|+|||
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~-~~~~~~~D~vih   94 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLER-AFDSFKPTHVVH   94 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHH-HHHHHCCSEEEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHH-HHhhcCCCEEEE
Confidence            5688999999998 8999999999999999999999964432211111111 11  23322   222 123  6899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        95 ~A~~~   99 (330)
T 2pzm_A           95 SAAAY   99 (330)
T ss_dssp             CCCCC
T ss_pred             CCccC
Confidence            99864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.48  E-value=0.00044  Score=69.65  Aligned_cols=66  Identities=18%  Similarity=0.187  Sum_probs=46.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhccccc--CCC-CccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLADLENF--NPE-DGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~--~~~-~~divInat~~  451 (616)
                      +++++|+|+|.+|++++..|.+.|++|+++.|+.++..   .  +...  .++.+...+  ... .+|+||++++.
T Consensus         3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~--~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMP---A--GVQTLIADVTRPDTLASIVHLRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCC---T--TCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccc---c--CCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence            57899999999999999999999999999999865421   0  1111  233322221  122 38999998864

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.47  E-value=0.0006  Score=66.98  Aligned_cols=68  Identities=15%  Similarity=0.112  Sum_probs=44.8

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhccccc--C-CCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF--N-PEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~--~-~~~~divInat~~g  452 (616)
                      |+++|+|+ ||+|++++..|++.|++|++++|+.++.+.   .+.....+.+++..+  . ....|+|||+++..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            57999998 899999999999999999999998653211   000000011111110  0 13689999999864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.45  E-value=0.0053  Score=59.75  Aligned_cols=35  Identities=34%  Similarity=0.515  Sum_probs=32.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +|+++|+|+ ||+|++++..|++.|++|++++|+.+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence            578999998 79999999999999999999999754

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.43  E-value=0.0014  Score=67.33  Aligned_cols=110  Identities=15%  Similarity=0.085  Sum_probs=68.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      +++.|+|+|.+|++++..|.+.|.+|++++|+.++++++.+ .+.... +.++.    ..++|+||.++|....  ....
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~----~~~~DvVi~av~~~~~--~~~v  103 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-EGARLGRTPAEV----VSTCDITFACVSDPKA--AKDL  103 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-TTCEECSCHHHH----HHHCSEEEECCSSHHH--HHHH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-cCCEEcCCHHHH----HhcCCEEEEeCCCHHH--HHHH
Confidence            67999999999999999999999999999999998887765 232211 22221    2347999999983211  0000


Q ss_pred             --ccc--cccccCccEEEEEeeCCcc-c-HHHHHHHHcCCeEEc
Q 007151          461 --PIP--KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIVS  498 (616)
Q Consensus       461 --pi~--~~~l~~~~~v~Di~Y~P~~-T-~ll~~A~~~G~~~i~  498 (616)
                        .+.  ...+.++.+++|+.-.... + .+.+...+.|..+++
T Consensus       104 ~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~  147 (316)
T 2uyy_A          104 VLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE  147 (316)
T ss_dssp             HHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence              000  0235567888888654322 2 233333455666554

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.42  E-value=0.0037  Score=64.78  Aligned_cols=34  Identities=15%  Similarity=0.310  Sum_probs=30.6

Q ss_pred             CcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +|+++|+|+|   |+|+++|..|++.|++|++..|+.
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            6899999985   999999999999999999777664

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=96.37  E-value=0.0018  Score=71.06  Aligned_cols=112  Identities=19%  Similarity=0.183  Sum_probs=71.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-H---HCCcc-cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAE-T---VGGHA-LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~-~---~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .++.|+|+|.+|.+++..|++.|.+|+++||+.++++++.+ +   .+... .+++++.+ .+.++|+||-++|.+..  
T Consensus         3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~-~l~~aDvVilaVp~~~~--   79 (482)
T 2pgd_A            3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS-KLKKPRRIILLVKAGQA--   79 (482)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-HBCSSCEEEECSCTTHH--
T ss_pred             CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHh-hccCCCEEEEeCCChHH--
Confidence            46999999999999999999999999999999999998876 2   12111 12322211 12358999999987521  


Q ss_pred             CCCCccc--cccccCccEEEEEeeCC-cccH-HHHHHHHcCCeEE
Q 007151          457 VDETPIP--KHALGHYALVFDAVYTP-KITR-LLREAEESGATIV  497 (616)
Q Consensus       457 ~~~~pi~--~~~l~~~~~v~Di~Y~P-~~T~-ll~~A~~~G~~~i  497 (616)
                      .+. -+.  ...++++.+++|+.-.. ..|. +.+...+.|..++
T Consensus        80 v~~-vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v  123 (482)
T 2pgd_A           80 VDN-FIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV  123 (482)
T ss_dssp             HHH-HHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence            010 011  11356678999986443 2332 3344445676654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.37  E-value=0.0054  Score=63.30  Aligned_cols=74  Identities=15%  Similarity=0.095  Sum_probs=50.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH----HHHHHHHHHH-----CC-cc--cchhc---ccccCCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----DRARELAETV-----GG-HA--LSLAD---LENFNPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~----~ka~~la~~~-----~~-~~--~~~~~---l~~~~~~~  441 (616)
                      .+.+++|||+|| |.+|++++..|.+.|++|+++.|+.    +....+...+     .. ..  .++.+   +.+ ...+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~  100 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ-VMKG  100 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH-HTTT
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhcC
Confidence            356789999997 8899999999999999999999953    3333333211     11 11  23322   222 2457


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      +|+|||+++..
T Consensus       101 ~d~Vih~A~~~  111 (351)
T 3ruf_A          101 VDHVLHQAALG  111 (351)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            89999999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.36  E-value=0.0055  Score=63.92  Aligned_cols=69  Identities=25%  Similarity=0.240  Sum_probs=53.2

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .|++|+|+|+|++|.+++..+...|++|+++.++.++.+ ++++++...+- .+.+.+ ...+|+++++++.
T Consensus       176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~-~~~~~~-~~~~D~vid~~g~  244 (348)
T 3two_A          176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSMGVKHFY-TDPKQC-KEELDFIISTIPT  244 (348)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHTTCSEEE-SSGGGC-CSCEEEEEECCCS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhcCCCeec-CCHHHH-hcCCCEEEECCCc
Confidence            478999999999999999999999999999999988766 55667764422 222221 2268999999884

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.36  E-value=0.0013  Score=68.31  Aligned_cols=72  Identities=18%  Similarity=0.254  Sum_probs=47.0

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHC------Ccc----cchhc---ccc----cCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY---DRARELAETVG------GHA----LSLAD---LEN----FNP  439 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~------~~~----~~~~~---l~~----~~~  439 (616)
                      +|+++|+|+ ||+|++++..|++.|++|+++.|+.   ++..+..+..+      ...    .|+.+   +.+    ...
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            688999998 7999999999999999887776643   33333333321      111    23322   111    112


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|+|||+++.+
T Consensus        82 g~iD~lVnnAG~~   94 (327)
T 1jtv_A           82 GRVDVLVCNAGLG   94 (327)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence            4589999999865

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.35  E-value=0.0034  Score=65.72  Aligned_cols=112  Identities=16%  Similarity=0.194  Sum_probs=74.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK--GAR-VVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~--G~~-V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..++.|+|+|.+|+..+..|.+.  +++ +.+++|+.+++++++++++... -+++++-+  ..+.|+|+.+||...+. 
T Consensus        13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~i~tp~~~h~-   89 (354)
T 3q2i_A           13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLA--QTDADIVILTTPSGLHP-   89 (354)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHH--HCCCSEEEECSCGGGHH-
T ss_pred             cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhc--CCCCCEEEECCCcHHHH-
Confidence            35899999999999999999987  566 5599999999999999987633 24444321  13589999999965331 


Q ss_pred             CCCCccccccccCccEEEEEeeCCcc------cHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKI------TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~------T~ll~~A~~~G~~~i~Gl~  501 (616)
                          ++....++.+.-|+  +-+|..      -.+.+.|++.|..+.-|..
T Consensus        90 ----~~~~~al~~gk~v~--~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~  134 (354)
T 3q2i_A           90 ----TQSIECSEAGFHVM--TEKPMATRWEDGLEMVKAADKAKKHLFVVKQ  134 (354)
T ss_dssp             ----HHHHHHHHTTCEEE--ECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred             ----HHHHHHHHCCCCEE--EeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc
Confidence                12222344433322  113321      2456667777887766654

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.35  E-value=0.0034  Score=64.85  Aligned_cols=110  Identities=16%  Similarity=0.118  Sum_probs=68.5

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC--HHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT--YDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt--~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .+++.|||+|-+|.+++..|++.|+ +|++++|+  .++.+.+. +.+.... +..+.    ..++|+||-++|......
T Consensus        24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-~~g~~~~~~~~e~----~~~aDvVi~~vp~~~~~~   98 (312)
T 3qsg_A           24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-ELGVSCKASVAEV----AGECDVIFSLVTAQAALE   98 (312)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-HTTCEECSCHHHH----HHHCSEEEECSCTTTHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-HCCCEEeCCHHHH----HhcCCEEEEecCchhHHH
Confidence            4689999999999999999999999 99999997  45555443 4443321 22221    234799999998653211


Q ss_pred             CCCCccccccccCccEEEEEeeCCcccH-H-HHHHHHc--CCeEE
Q 007151          457 VDETPIPKHALGHYALVFDAVYTPKITR-L-LREAEES--GATIV  497 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~~v~Di~Y~P~~T~-l-l~~A~~~--G~~~i  497 (616)
                      . ...+ ...+.++.+++|..-.+..|. - .+...++  |...+
T Consensus        99 ~-~~~l-~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~v  141 (312)
T 3qsg_A           99 V-AQQA-GPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYA  141 (312)
T ss_dssp             H-HHHH-GGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred             H-HHhh-HhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEE
Confidence            0 0001 123566789999976554432 2 2233445  66544

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.34  E-value=0.0077  Score=62.51  Aligned_cols=68  Identities=22%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc--------ccchhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH--------ALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~--------~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+.....        .....+..+  ...+|+||-+++.
T Consensus        15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~aDvVil~vk~   90 (335)
T 1z82_A           15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE--IKKEDILVIAIPV   90 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG--CCTTEEEEECSCG
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH--hcCCCEEEEECCH
Confidence            5899999999999999999999999999999999999987762100        000112211  3457888888774

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=96.33  E-value=0.0061  Score=67.72  Aligned_cols=96  Identities=24%  Similarity=0.190  Sum_probs=65.9

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.++++.|+|.|.+|+++|..|...|.+|++++|+....  .+.+.+....+++++    ..++|+|+.++|..-.  
T Consensus       138 ~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~a~~~g~~~~~l~e~----~~~aDvV~l~~P~~~~--  209 (529)
T 1ygy_A          138 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPA--RAAQLGIELLSLDDL----LARADFISVHLPKTPE--  209 (529)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHH--HHHHHTCEECCHHHH----HHHCSEEEECCCCSTT--
T ss_pred             cccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChh--HHHhcCcEEcCHHHH----HhcCCEEEECCCCchH--
Confidence            46889999999999999999999999999999999976432  244555443344332    2347999999997511  


Q ss_pred             CCCCcccc---ccccCccEEEEEeeCCc
Q 007151          457 VDETPIPK---HALGHYALVFDAVYTPK  481 (616)
Q Consensus       457 ~~~~pi~~---~~l~~~~~v~Di~Y~P~  481 (616)
                      .. ..+..   ..++++.+++|+.-.+.
T Consensus       210 t~-~~i~~~~~~~~k~g~ilin~arg~i  236 (529)
T 1ygy_A          210 TA-GLIDKEALAKTKPGVIIVNAARGGL  236 (529)
T ss_dssp             TT-TCBCHHHHTTSCTTEEEEECSCTTS
T ss_pred             HH-HHhCHHHHhCCCCCCEEEECCCCch
Confidence            11 11322   13566778888875433

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.33  E-value=0.0063  Score=62.67  Aligned_cols=70  Identities=19%  Similarity=0.192  Sum_probs=53.1

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHCCc------ccc--hhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG--ARVVIANRTYDRARELAETVGGH------ALS--LADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G--~~V~v~nRt~~ka~~la~~~~~~------~~~--~~~l~~~~~~~~divInat~~  451 (616)
                      +++.|+|+|.+|.+++..|++.|  .+|++++|+.++++.++.+++..      ...  ..+.+  ...++|+||.+++.
T Consensus         2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~--~~~~aDvViiav~~   79 (309)
T 1hyh_A            2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA--ALADADVVISTLGN   79 (309)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG--GGTTCSEEEECCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHH--HhCCCCEEEEecCC
Confidence            47999999999999999999989  58999999999998887655310      011  12332  24568999999986


Q ss_pred             CC
Q 007151          452 GM  453 (616)
Q Consensus       452 gm  453 (616)
                      ..
T Consensus        80 ~~   81 (309)
T 1hyh_A           80 IK   81 (309)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}

Probab=96.32  E-value=0.016  Score=62.33  Aligned_cols=131  Identities=14%  Similarity=0.171  Sum_probs=80.0

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEECC---------------HHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANRT---------------YDRA  417 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nRt---------------~~ka  417 (616)
                      +.|.+..++..++..       +.++++++|.|.|.|.+|+.++..|.+.|++|+ |.+++               .+..
T Consensus       192 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l  264 (421)
T 2yfq_A          192 GFGVAVVVRESAKRF-------GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKEL  264 (421)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHH
T ss_pred             HHHHHHHHHHHHHhc-------CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHH
Confidence            578887777666531       247889999999999999999999999999766 78877               3666


Q ss_pred             HHHHHHHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH-HHHH
Q 007151          418 RELAETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREA  489 (616)
Q Consensus       418 ~~la~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l-l~~A  489 (616)
                      .++.++.+.       +.++-+++   ...++|++|.|+.-+..   +..+.  ..+ ..++|++-.-.|- |+- -+.-
T Consensus       265 ~~~~~~~g~i~~~~~a~~i~~~~~---~~~~~DIliP~A~~n~i---~~~~A--~~l-~ak~VvEgAN~P~-t~ea~~il  334 (421)
T 2yfq_A          265 LAYKEANKTLIGFPGAERITDEEF---WTKEYDIIVPAALENVI---TGERA--KTI-NAKLVCEAANGPT-TPEGDKVL  334 (421)
T ss_dssp             HHHHHHHCC------------------------CEEECSCSSCS---CHHHH--TTC-CCSEEECCSSSCS-CHHHHHHH
T ss_pred             HHHHHhcCCcccCCCceEeCccch---hcCCccEEEEcCCcCcC---CcccH--HHc-CCeEEEeCCcccc-CHHHHHHH
Confidence            666665442       11111122   12358999998864321   11111  123 4578888887774 432 2233


Q ss_pred             HHcCCeEEccHH
Q 007151          490 EESGATIVSGLE  501 (616)
Q Consensus       490 ~~~G~~~i~Gl~  501 (616)
                      +++|+.++++.-
T Consensus       335 ~~~GI~~~Pd~~  346 (421)
T 2yfq_A          335 TERGINLTPDIL  346 (421)
T ss_dssp             HHHTCEEECHHH
T ss_pred             HHCCCEEEChHH
Confidence            467998885443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=96.31  E-value=0.006  Score=76.18  Aligned_cols=48  Identities=23%  Similarity=0.432  Sum_probs=39.8

Q ss_pred             cccCCcEEEEEcc-ch-hHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHH
Q 007151          377 SALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIA-NRTYDRARELAETV  424 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GG-agrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~  424 (616)
                      ..+++|++||+|+ || +|++++..|++.|++|+++ .|+.++++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL  721 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  721 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHH
Confidence            4688999999998 46 9999999999999999998 68777776655443

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.31  E-value=0.0024  Score=64.96  Aligned_cols=109  Identities=17%  Similarity=0.174  Sum_probs=71.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .++.|+|+|.+|++++..|.+.|++|++++|+.++++.+.+. +.... +.++.    ..++|+||.++|....  ... 
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~----~~~~D~vi~~vp~~~~--~~~-   76 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-GAQACENNQKV----AAASDIIFTSLPNAGI--VET-   76 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-TCEECSSHHHH----HHHCSEEEECCSSHHH--HHH-
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCeecCCHHHH----HhCCCEEEEECCCHHH--HHH-
Confidence            579999999999999999999999999999999998887654 32211 22221    2247999999985321  000 


Q ss_pred             ccc-----cccccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEEc
Q 007151          461 PIP-----KHALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  498 (616)
Q Consensus       461 pi~-----~~~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i~  498 (616)
                      -+.     ...+.++.+++|+.-... .+ .+.+...+.|..+++
T Consensus        77 v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~  121 (301)
T 3cky_A           77 VMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD  121 (301)
T ss_dssp             HHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            010     123566788999875542 22 333444556776664

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.28  E-value=0.0036  Score=81.78  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             ccCCcEEEEEccc-h-hHHHHHHHHHHCCCeEEEEECCHHH-----HHHHHHHHCC---cc----cchhc---cccc---
Q 007151          378 ALAGKLFVVIGAG-G-AGKALAYGAKAKGARVVIANRTYDR-----ARELAETVGG---HA----LSLAD---LENF---  437 (616)
Q Consensus       378 ~l~~k~vlVlGAG-G-agrAia~~L~~~G~~V~v~nRt~~k-----a~~la~~~~~---~~----~~~~~---l~~~---  437 (616)
                      .++||.++|+|++ | +|+++|..|++.|++|++++|+.++     +++++++++.   ..    +++.+   +..+   
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            4889999999984 8 9999999999999999999998766     6777777743   11    23321   1110   


Q ss_pred             -------CCCCccEEEEcCCC
Q 007151          438 -------NPEDGMILANTTSI  451 (616)
Q Consensus       438 -------~~~~~divInat~~  451 (616)
                             ..+..|++||+++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCC
T ss_pred             HHhhhhhhcCCCCEEEECCCc
Confidence                   13568999999986

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.27  E-value=0.005  Score=62.42  Aligned_cols=71  Identities=20%  Similarity=0.254  Sum_probs=50.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHHH--CCcc--cchhc---ccccCCCCccEEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-----YDRARELAETV--GGHA--LSLAD---LENFNPEDGMILAN  447 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-----~~ka~~la~~~--~~~~--~~~~~---l~~~~~~~~divIn  447 (616)
                      .++++|+|| |++|++++.+|.+.|++|+++.|+     +++++.+.+.-  +...  .++.+   +.+ ...++|+||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~-~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD-ALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH-HHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHH-HHhCCCEEEE
Confidence            467999997 899999999999999999999998     56665543211  2222  23332   222 2456899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        83 ~a~~~   87 (313)
T 1qyd_A           83 ALAGG   87 (313)
T ss_dssp             CCCCS
T ss_pred             CCccc
Confidence            98754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.27  E-value=0.0012  Score=68.28  Aligned_cols=68  Identities=19%  Similarity=0.231  Sum_probs=45.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~  450 (616)
                      .+.++|+|||+|| |++|++++..|.+.|++|++++|+.++       -+...  .++.+   +.+ ...++|+||++++
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~A~   86 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSD-AIMGVSAVLHLGA   86 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHH-HHTTCSEEEECCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHH-HHhCCCEEEECCc
Confidence            4677899999998 899999999999999999999998654       11111  23322   222 2346899999987


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        87 ~~   88 (347)
T 4id9_A           87 FM   88 (347)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.26  E-value=0.0044  Score=64.20  Aligned_cols=74  Identities=15%  Similarity=0.137  Sum_probs=51.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH----HHHHHHHHHHC----C--cc--cchhc---ccccCCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----DRARELAETVG----G--HA--LSLAD---LENFNPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~----~ka~~la~~~~----~--~~--~~~~~---l~~~~~~~  441 (616)
                      .+.+++++|+|+ |++|++++..|.+.|++|++++|+.    ++.+.+.+.+.    .  ..  .++.+   +.+ ...+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~  102 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN-ACAG  102 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH-HHTT
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHH-HhcC
Confidence            456789999998 8999999999999999999999964    34555544331    1  11  23322   222 2346


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      +|+|||+++..
T Consensus       103 ~d~vih~A~~~  113 (352)
T 1sb8_A          103 VDYVLHQAALG  113 (352)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEECCccc
Confidence            89999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.25  E-value=0.006  Score=63.80  Aligned_cols=71  Identities=27%  Similarity=0.296  Sum_probs=53.8

Q ss_pred             CC--cEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhc------ccccCCCCccEEEEc
Q 007151          380 AG--KLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLAD------LENFNPEDGMILANT  448 (616)
Q Consensus       380 ~~--k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~~~~~~divIna  448 (616)
                      .+  ++|+|+|+ ||+|++++..++..|+ +|++++|+.++.+.+.++++... ++..+      +.+.....+|++||+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~  237 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDN  237 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence            46  89999998 9999999999999999 99999999988887766576532 23221      111111268999999


Q ss_pred             CC
Q 007151          449 TS  450 (616)
Q Consensus       449 t~  450 (616)
                      ++
T Consensus       238 ~G  239 (357)
T 2zb4_A          238 VG  239 (357)
T ss_dssp             CC
T ss_pred             CC
Confidence            98

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.24  E-value=0.0081  Score=62.17  Aligned_cols=71  Identities=21%  Similarity=0.316  Sum_probs=53.4

Q ss_pred             CCcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .|++|+|+| +|++|.+++..+...|++|+++.|+.++.+ ++++++... ++..+      +.+. ....+|+++|+++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g  226 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG  226 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence            578999999 699999999999999999999999988877 566677542 22211      1111 1246899999998


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       227 ~  227 (334)
T 3qwb_A          227 K  227 (334)
T ss_dssp             G
T ss_pred             h
Confidence            4

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.23  E-value=0.0031  Score=64.07  Aligned_cols=109  Identities=13%  Similarity=0.190  Sum_probs=70.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET  460 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~  460 (616)
                      .++.|+|+|.+|++++..|.+.|.+|++++|+.++++.+.+. +... .+.++.    ..++|+||.++|....  ... 
T Consensus         6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~----~~~~D~vi~~v~~~~~--~~~-   77 (299)
T 1vpd_A            6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAETASTAKAI----AEQCDVIITMLPNSPH--VKE-   77 (299)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEECSSHHHH----HHHCSEEEECCSSHHH--HHH-
T ss_pred             ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCeecCCHHHH----HhCCCEEEEECCCHHH--HHH-
Confidence            479999999999999999999999999999999998887664 3221 122221    2347999999984311  000 


Q ss_pred             cc---c--cccccCccEEEEEeeCCcc-c-HHHHHHHHcCCeEEc
Q 007151          461 PI---P--KHALGHYALVFDAVYTPKI-T-RLLREAEESGATIVS  498 (616)
Q Consensus       461 pi---~--~~~l~~~~~v~Di~Y~P~~-T-~ll~~A~~~G~~~i~  498 (616)
                      -+   .  ...+.++.+++|+.-.+.. + .+.+...+.|..+++
T Consensus        78 ~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~  122 (299)
T 1vpd_A           78 VALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD  122 (299)
T ss_dssp             HHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            01   0  1235667888898655432 2 233334455766554

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=96.23  E-value=0.006  Score=66.83  Aligned_cols=112  Identities=23%  Similarity=0.211  Sum_probs=72.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc-cchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA-LSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~-~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      +++.|+|+|.+|++++..|++.|.+|+++||+.++++++.++.+   ... .+++++.. .++.+|+||-++|.+..  .
T Consensus         6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~-~l~~aDvVilavp~~~~--v   82 (474)
T 2iz1_A            6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVG-SLEKPRRIMLMVQAGAA--T   82 (474)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHH-TBCSSCEEEECCCTTHH--H
T ss_pred             CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHh-hccCCCEEEEEccCchH--H
Confidence            57999999999999999999999999999999999999988752   111 12333221 22348999999987521  0


Q ss_pred             CCCccc--cccccCccEEEEEeeCC-cccH-HHHHHHHcCCeEE
Q 007151          458 DETPIP--KHALGHYALVFDAVYTP-KITR-LLREAEESGATIV  497 (616)
Q Consensus       458 ~~~pi~--~~~l~~~~~v~Di~Y~P-~~T~-ll~~A~~~G~~~i  497 (616)
                      +. -+.  ...++++.+++|+.-.. ..|. +.+..++.|..++
T Consensus        83 ~~-vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v  125 (474)
T 2iz1_A           83 DA-TIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFI  125 (474)
T ss_dssp             HH-HHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEE
T ss_pred             HH-HHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEE
Confidence            10 011  12356677888986542 2332 3233334566544

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=96.22  E-value=0.014  Score=64.23  Aligned_cols=95  Identities=18%  Similarity=0.224  Sum_probs=59.5

Q ss_pred             CCcEEEEEccchhHHH-HHHHHHHCCCeEEEEECCHHH-HHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          380 AGKLFVVIGAGGAGKA-LAYGAKAKGARVVIANRTYDR-ARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       380 ~~k~vlVlGAGGagrA-ia~~L~~~G~~V~v~nRt~~k-a~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      +.|++.|+|.||+|.+ +|..|.++|++|++.++.... .+.|. +.+.....-.+.+  .+.++|+||-+.+       
T Consensus        21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~-~~gi~~~~g~~~~--~~~~~d~vV~Spg-------   90 (494)
T 4hv4_A           21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLT-ALGAQIYFHHRPE--NVLDASVVVVSTA-------   90 (494)
T ss_dssp             -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCEEESSCCGG--GGTTCSEEEECTT-------
T ss_pred             cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHH-HCCCEEECCCCHH--HcCCCCEEEECCC-------
Confidence            3589999999999996 799999999999999976432 22222 2222110000000  0122344442221       


Q ss_pred             CCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHH
Q 007151          458 DETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIG  505 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~  505 (616)
                                           -|...|.+++|+++|++++.-.++|.+
T Consensus        91 ---------------------i~~~~p~~~~a~~~gi~v~~~~e~l~~  117 (494)
T 4hv4_A           91 ---------------------ISADNPEIVAAREARIPVIRRAEMLAE  117 (494)
T ss_dssp             ---------------------SCTTCHHHHHHHHTTCCEEEHHHHHHH
T ss_pred             ---------------------CCCCCHHHHHHHHCCCCEEcHHHHHHH
Confidence                                 133577889999999999999998753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=96.22  E-value=0.0074  Score=75.28  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=53.0

Q ss_pred             cccCCcEEEEEcc-ch-hHHHHHHHHHHCCCeEEEEE-CCHHHHHHHH----HHHC---Ccc----cchhc---cccc--
Q 007151          377 SALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIAN-RTYDRARELA----ETVG---GHA----LSLAD---LENF--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GG-agrAia~~L~~~G~~V~v~n-Rt~~ka~~la----~~~~---~~~----~~~~~---l~~~--  437 (616)
                      .++++|++||+|+ || +|++++..|++.|++|++++ |+.++.++.+    ++++   ...    +++.+   +..+  
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4678999999998 57 99999999999999999985 6666554443    4442   221    23322   1110  


Q ss_pred             ----C---CC-CccEEEEcCCCCC
Q 007151          438 ----N---PE-DGMILANTTSIGM  453 (616)
Q Consensus       438 ----~---~~-~~divInat~~gm  453 (616)
                          .   .+ ..|+|||++++..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~  751 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPE  751 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCC
T ss_pred             HHHHhhcccCCCCcEEEeCccccc
Confidence                2   34 6899999998753

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.21  E-value=0.0095  Score=62.35  Aligned_cols=71  Identities=23%  Similarity=0.338  Sum_probs=52.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .+++|+|+|+ ||+|.+++..+...|++|+++.|+.++.+ ++++++... ++..+      +.+. ....+|++||+++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999998 99999999999999999999999998877 556666532 22221      1110 1236899999987


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       249 ~  249 (351)
T 1yb5_A          249 N  249 (351)
T ss_dssp             H
T ss_pred             h
Confidence            3

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.21  E-value=0.0053  Score=63.86  Aligned_cols=90  Identities=18%  Similarity=0.167  Sum_probs=61.1

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----------c--chhcccccCCCCccEEEEcC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----------L--SLADLENFNPEDGMILANTT  449 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----------~--~~~~l~~~~~~~~divInat  449 (616)
                      .++.|+|+|.+|.+++..|++.|.+|++++|+.++++++.+..+...          +  ...+..+ ...++|+||.++
T Consensus         5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL-AVKDADVILIVV   83 (359)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH-HHTTCSEEEECS
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHH-HHhcCCEEEEeC
Confidence            58999999999999999999999999999999999998877642100          0  1112222 134689999999


Q ss_pred             CCCCCCCCCCCccc--cccccCccEEEEE
Q 007151          450 SIGMQPKVDETPIP--KHALGHYALVFDA  476 (616)
Q Consensus       450 ~~gm~p~~~~~pi~--~~~l~~~~~v~Di  476 (616)
                      |.....    ..+.  ...+.++.++++.
T Consensus        84 ~~~~~~----~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           84 PAIHHA----SIAANIASYISEGQLIILN  108 (359)
T ss_dssp             CGGGHH----HHHHHHGGGCCTTCEEEES
T ss_pred             CchHHH----HHHHHHHHhCCCCCEEEEc
Confidence            864321    0111  1124556777777

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.21  E-value=0.0077  Score=62.07  Aligned_cols=70  Identities=20%  Similarity=0.302  Sum_probs=51.7

Q ss_pred             CCcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .+++|+|+| +||+|++++..+...|++|+++.|+.++.+.+. +++.. .++..+      +.+. ....+|++||+++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            478999999 599999999999999999999999988876654 46643 223211      1110 1235899999998

>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A

Probab=96.20  E-value=0.036  Score=59.59  Aligned_cols=130  Identities=19%  Similarity=0.247  Sum_probs=84.5

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeE-EEEECC----------HHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARV-VIANRT----------YDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V-~v~nRt----------~~ka~~la~  422 (616)
                      +.|.+..++..++..       +.++++++|+|-|.|.+|..++..|.++|++| .|.+.+          .+...++.+
T Consensus       201 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~  273 (424)
T 3k92_A          201 AQGVTICIEEAVKKK-------GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRD  273 (424)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHc-------CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHH
Confidence            578887777655431       24789999999999999999999999999975 678876          666666554


Q ss_pred             HHCC------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH-HHHHHHcCCe
Q 007151          423 TVGG------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREAEESGAT  495 (616)
Q Consensus       423 ~~~~------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l-l~~A~~~G~~  495 (616)
                      +.+.      ..++-+++-.   .++|+++-|+.-+..   +....+  .+ ..++|++-.-+|- |+- -+.-+++|+.
T Consensus       274 ~~g~i~~~~a~~~~~~~i~~---~~~DIliPcA~~n~I---~~~~a~--~l-~ak~V~EgAN~p~-t~eA~~iL~~rGI~  343 (424)
T 3k92_A          274 SFGMVTNLFTDVITNEELLE---KDCDILVPAAISNQI---TAKNAH--NI-QASIVVERANGPT-TIDATKILNERGVL  343 (424)
T ss_dssp             SSSCCGGGCSCCBCHHHHHH---SCCSEEEECSCSSCB---CTTTGG--GC-CCSEEECCSSSCB-CHHHHHHHHHTTCE
T ss_pred             HhCCCCCCCcEEecCcccee---ccccEEeecCccccc---ChhhHh--hc-CceEEEcCCCCCC-CHHHHHHHHHCCCE
Confidence            4321      1111122211   358999988875432   111121  23 4578888888885 542 2333578998


Q ss_pred             EEccH
Q 007151          496 IVSGL  500 (616)
Q Consensus       496 ~i~Gl  500 (616)
                      ++++.
T Consensus       344 ~~PD~  348 (424)
T 3k92_A          344 LVPDI  348 (424)
T ss_dssp             EECHH
T ss_pred             EECch
Confidence            88643

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=96.19  E-value=0.0083  Score=62.06  Aligned_cols=71  Identities=18%  Similarity=0.300  Sum_probs=52.5

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .+++++|+|+ ||+|++++..+...|++|++++|+.++.+.+. +++... ++..+      +.+. ....+|++||+++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g  223 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG  223 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence            4789999996 99999999999999999999999988876654 466432 22211      1110 1235899999998


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       224 ~  224 (333)
T 1wly_A          224 K  224 (333)
T ss_dssp             T
T ss_pred             H
Confidence            4

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.18  E-value=0.0048  Score=62.98  Aligned_cols=70  Identities=13%  Similarity=0.122  Sum_probs=49.0

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH------HHHHHHHHH--HCCcc--cchhc---ccccCCCCccEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY------DRARELAET--VGGHA--LSLAD---LENFNPEDGMILA  446 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~------~ka~~la~~--~~~~~--~~~~~---l~~~~~~~~divI  446 (616)
                      .++++|+|| |++|++++.+|.+.|++|+++.|+.      ++++.+.+.  -+...  .++.+   +.. ...+.|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~-a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVS-VLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHH-HHcCCCEEE
Confidence            467999997 8999999999999999999999975      455444321  12222  23333   222 245689999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      |+++.
T Consensus        83 ~~a~~   87 (321)
T 3c1o_A           83 SALPF   87 (321)
T ss_dssp             ECCCG
T ss_pred             ECCCc
Confidence            99874

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.17  E-value=0.0075  Score=61.06  Aligned_cols=116  Identities=22%  Similarity=0.125  Sum_probs=71.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~--G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      -+++.|+|+|.+|.+++..|.+.  |.+|++++|+.++++.+.+ .+.......+..+ ...++|+||-|+|......  
T Consensus         6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~aDvVilavp~~~~~~--   81 (290)
T 3b1f_A            6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE-RGIVDEATADFKV-FAALADVIILAVPIKKTID--   81 (290)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-TTSCSEEESCTTT-TGGGCSEEEECSCHHHHHH--
T ss_pred             cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH-cCCcccccCCHHH-hhcCCCEEEEcCCHHHHHH--
Confidence            36899999999999999999988  4599999999998887654 3321001122222 2345899999998643210  


Q ss_pred             CCccc--ccc-ccCccEEEEEeeCCc-ccHHHHHHHHc-CCeEEccHHH
Q 007151          459 ETPIP--KHA-LGHYALVFDAVYTPK-ITRLLREAEES-GATIVSGLEM  502 (616)
Q Consensus       459 ~~pi~--~~~-l~~~~~v~Di~Y~P~-~T~ll~~A~~~-G~~~i~Gl~M  502 (616)
                        -+.  ... +++..+++|+.-.+. .+..+.+.-.. +.+++++..|
T Consensus        82 --v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~  128 (290)
T 3b1f_A           82 --FIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPM  128 (290)
T ss_dssp             --HHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC
T ss_pred             --HHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCc
Confidence              011  113 556678888754322 12223333222 6677765554

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=96.17  E-value=0.0053  Score=67.32  Aligned_cols=110  Identities=20%  Similarity=0.240  Sum_probs=70.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----c-c---cchhcccccCCCCccEEEEcCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----H-A---LSLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~-~---~~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.++++++.++.+.    . .   .+.+++.. .+..+|+||-++|.+..
T Consensus         3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~-~l~~aDvVilaVp~~~~   81 (478)
T 1pgj_A            3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAA-SLKKPRKALILVQAGAA   81 (478)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHH-HBCSSCEEEECCCCSHH
T ss_pred             EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHh-cccCCCEEEEecCChHH
Confidence            58999999999999999999999999999999999999887541    1 1   12222211 12347999999987521


Q ss_pred             CCCCCCccc--cccccCccEEEEEeeCC-cccH-HHHHHHHcCCeE
Q 007151          455 PKVDETPIP--KHALGHYALVFDAVYTP-KITR-LLREAEESGATI  496 (616)
Q Consensus       455 p~~~~~pi~--~~~l~~~~~v~Di~Y~P-~~T~-ll~~A~~~G~~~  496 (616)
                        .+. -+.  ...++++.+++|+.-.. ..|. +.+..++.|..+
T Consensus        82 --v~~-vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~  124 (478)
T 1pgj_A           82 --TDS-TIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRF  124 (478)
T ss_dssp             --HHH-HHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEE
T ss_pred             --HHH-HHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeE
Confidence              010 011  01355678889986443 2332 333344456543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.16  E-value=0.0093  Score=62.12  Aligned_cols=71  Identities=18%  Similarity=0.255  Sum_probs=52.8

Q ss_pred             CCcEEEEEccc-hhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcc-cchhc------ccccCC-CCccEEEEcC
Q 007151          380 AGKLFVVIGAG-GAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA-LSLAD------LENFNP-EDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAG-GagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~~~-~~~divInat  449 (616)
                      .+++|+|+|+| |+|++++..+... |++|++++|+.++.+.+ ++++... ++..+      +.+... ..+|++||++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  248 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN  248 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECC
Confidence            57899999998 9999999999999 99999999998887655 5566532 22221      111111 4689999999


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      +.
T Consensus       249 g~  250 (347)
T 1jvb_A          249 NS  250 (347)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.15  E-value=0.0067  Score=59.72  Aligned_cols=69  Identities=20%  Similarity=0.096  Sum_probs=45.5

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHH-CCCeEEEEECCHH-HHHHHHHHHCCcccchhc---ccc----cCCCCccEEEEcC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKA-KGARVVIANRTYD-RARELAETVGGHALSLAD---LEN----FNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~-~G~~V~v~nRt~~-ka~~la~~~~~~~~~~~~---l~~----~~~~~~divInat  449 (616)
                      ++|+++|+|+ ||+|++++..|++ .|++|++++|+.+ ..+.+    .....|+.+   +.+    ......|++||++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            4789999998 6999999999999 6779999998754 21110    000112211   111    1223689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus        79 g~~   81 (244)
T 4e4y_A           79 GIL   81 (244)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            875

>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A

Probab=96.14  E-value=0.036  Score=59.53  Aligned_cols=128  Identities=16%  Similarity=0.118  Sum_probs=84.8

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCCeEE-EEEC----------CHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVV-IANR----------TYDRARELA  421 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~-~G~~V~-v~nR----------t~~ka~~la  421 (616)
                      +.|.+.+++..++..       +.+++++++.|.|.|.+|+.++..|.+ .|++|+ |.++          +.+.+.++.
T Consensus       189 g~Gv~~~~~~~~~~~-------g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~  261 (415)
T 2tmg_A          189 GRGVKVCAGLAMDVL-------GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYK  261 (415)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-------CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHH
Confidence            578888877666531       357899999999999999999999999 999766 7777          778888887


Q ss_pred             HHHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHH-HHHHHcC
Q 007151          422 ETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL-REAEESG  493 (616)
Q Consensus       422 ~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll-~~A~~~G  493 (616)
                      ++.+.       ..++-+++   ....+|+++.|+.-+..   +....  ..+ ..++|++-.-.|- |+-- +.-+++|
T Consensus       262 ~~~g~l~~y~~a~~~~~~ei---l~~~~DIliP~A~~n~i---~~~~a--~~l-~ak~V~EgAN~p~-t~~a~~~l~~~G  331 (415)
T 2tmg_A          262 KEHGTVVTYPKGERITNEEL---LELDVDILVPAALEGAI---HAGNA--ERI-KAKAVVEGANGPT-TPEADEILSRRG  331 (415)
T ss_dssp             HHSSCSTTCSSSEEECHHHH---TTCSCSEEEECSSTTSB---CHHHH--TTC-CCSEEECCSSSCB-CHHHHHHHHHTT
T ss_pred             HhhCCcccCCCceEcCchhh---hcCCCcEEEecCCcCcc---CcccH--HHc-CCeEEEeCCCccc-CHHHHHHHHHCC
Confidence            76431       11111222   12358999999874432   11111  123 4578888887774 5432 2234689


Q ss_pred             CeEEc
Q 007151          494 ATIVS  498 (616)
Q Consensus       494 ~~~i~  498 (616)
                      +.+++
T Consensus       332 i~~~P  336 (415)
T 2tmg_A          332 ILVVP  336 (415)
T ss_dssp             CEEEC
T ss_pred             CEEEC
Confidence            98884

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.13  E-value=0.0058  Score=64.07  Aligned_cols=71  Identities=20%  Similarity=0.263  Sum_probs=54.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc---ccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~---l~~~~~~~~divInat~~  451 (616)
                      .|++|+|+|+|++|.+++..+...|++|+++.++.++.+.+.++++... ++..+   +.+ ....+|+++++++.
T Consensus       180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~-~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE-LADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHH-STTTEEEEEECCCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHH-hcCCCCEEEECCCC
Confidence            5789999999999999999998899999999999888766655777532 33322   222 22468999999984

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.13  E-value=0.0038  Score=64.17  Aligned_cols=72  Identities=18%  Similarity=0.153  Sum_probs=46.2

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--HHCC-----cc--cchhccccc--CCCCccEEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE--TVGG-----HA--LSLADLENF--NPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~--~~~~-----~~--~~~~~l~~~--~~~~~divIn  447 (616)
                      +++++||+|+ |++|++++..|.+.|++|+++.|+.+..+++..  .+..     ..  .++.+...+  ...+.|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            5789999996 899999999999999999998898663322221  1111     11  133222111  2345799999


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      +++.
T Consensus        84 ~A~~   87 (337)
T 2c29_D           84 VATP   87 (337)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            8864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.12  E-value=0.0045  Score=62.96  Aligned_cols=35  Identities=20%  Similarity=0.132  Sum_probs=30.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC-CHH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANR-TYD  415 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR-t~~  415 (616)
                      ||++||+|| |++|++++..|.+.|++|+++.| +.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   37 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE   37 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC--
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCcc
Confidence            478999997 89999999999999999999888 653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.11  E-value=0.011  Score=61.62  Aligned_cols=76  Identities=17%  Similarity=0.264  Sum_probs=55.0

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-----c--chhcccccCCCCccEEEEc
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-----L--SLADLENFNPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-----~--~~~~l~~~~~~~~divIna  448 (616)
                      +..++++.|+|+|.+|.++++.|+..|.  +|.+++++.++++..+.++....     .  ...+.+  ...++|+||.+
T Consensus         6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~--a~~~aDiVvi~   83 (326)
T 3vku_A            6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYS--DAKDADLVVIT   83 (326)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGG--GGTTCSEEEEC
T ss_pred             cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHH--HhcCCCEEEEC
Confidence            3456799999999999999999999886  89999999999998877664211     0  111112  34668999999


Q ss_pred             CCCCCCC
Q 007151          449 TSIGMQP  455 (616)
Q Consensus       449 t~~gm~p  455 (616)
                      ++..-.|
T Consensus        84 ag~~~kp   90 (326)
T 3vku_A           84 AGAPQKP   90 (326)
T ss_dssp             CCCC---
T ss_pred             CCCCCCC
Confidence            8865444

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.10  E-value=0.0061  Score=61.61  Aligned_cols=70  Identities=21%  Similarity=0.265  Sum_probs=48.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC------HHHHHHHHHH--HCCcc--cchhc---ccccCCCCccEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT------YDRARELAET--VGGHA--LSLAD---LENFNPEDGMILA  446 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt------~~ka~~la~~--~~~~~--~~~~~---l~~~~~~~~divI  446 (616)
                      .++++|+|| |++|++++.+|.+.|++|+++.|+      +++++.+...  .+...  .++.+   +.+ ...+.|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~-~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE-AVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH-HHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHH-HHcCCCEEE
Confidence            467999998 899999999999999999999997      4555444321  12222  23332   222 234589999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      ++++.
T Consensus        83 ~~a~~   87 (308)
T 1qyc_A           83 STVGS   87 (308)
T ss_dssp             ECCCG
T ss_pred             ECCcc
Confidence            99874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.10  E-value=0.0096  Score=62.00  Aligned_cols=71  Identities=25%  Similarity=0.338  Sum_probs=51.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchh---ccc----ccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLA---DLE----NFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~---~l~----~~~~~~~divInat~  450 (616)
                      .|++|+|+|+ ||+|++++..+...|++|+++.|+.++.+ ++++++.. .+++.   ++.    +.....+|++||+++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            4789999999 89999999999999999999999988874 45566643 23332   111    100126899999987


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       248 ~  248 (347)
T 2hcy_A          248 S  248 (347)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.10  E-value=0.0045  Score=64.08  Aligned_cols=72  Identities=17%  Similarity=0.115  Sum_probs=48.7

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH----HHHHHHHHHH--CCcc--cchhc---ccccCCC--CccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----DRARELAETV--GGHA--LSLAD---LENFNPE--DGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~----~ka~~la~~~--~~~~--~~~~~---l~~~~~~--~~di  444 (616)
                      +..++|+|+|| |.+|++++.+|.+.|++|+++.|+.    ++++.+.+..  +...  .++.+   +.+ ...  ++|+
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~-~~~~~~~d~   86 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEK-ILKEHEIDI   86 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHH-HHHHTTCCE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHH-HHhhCCCCE
Confidence            34578999998 8999999999999999999999975    5555433221  2222  23332   222 233  6899


Q ss_pred             EEEcCCC
Q 007151          445 LANTTSI  451 (616)
Q Consensus       445 vInat~~  451 (616)
                      ||++++.
T Consensus        87 Vi~~a~~   93 (346)
T 3i6i_A           87 VVSTVGG   93 (346)
T ss_dssp             EEECCCG
T ss_pred             EEECCch
Confidence            9999875

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.08  E-value=0.0046  Score=69.31  Aligned_cols=37  Identities=16%  Similarity=0.287  Sum_probs=34.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      .+++++|+|+|+||+|..++..|+..|+ ++++++++.
T Consensus       323 kL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            4788999999999999999999999999 999999864

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.06  E-value=0.016  Score=60.48  Aligned_cols=75  Identities=16%  Similarity=0.174  Sum_probs=56.2

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-c-------cchhcccccCCCCccEEEEc
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-A-------LSLADLENFNPEDGMILANT  448 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~-~-------~~~~~l~~~~~~~~divIna  448 (616)
                      ...+++.|+|+|.+|.++++.|+..|.  +|.+++++.++++..+.++..- .       ....+.+  ...++|++|.+
T Consensus        17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~--~~~~aDiVvi~   94 (331)
T 4aj2_A           17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS--VTANSKLVIIT   94 (331)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG--GGTTEEEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH--HhCCCCEEEEc
Confidence            456799999999999999999999886  8999999999998887766421 0       1111222  24678999999


Q ss_pred             CCCCCCC
Q 007151          449 TSIGMQP  455 (616)
Q Consensus       449 t~~gm~p  455 (616)
                      ++..-.|
T Consensus        95 aG~~~kp  101 (331)
T 4aj2_A           95 AGARQQE  101 (331)
T ss_dssp             CSCCCCT
T ss_pred             cCCCCCC
Confidence            8765444

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.02  E-value=0.014  Score=60.47  Aligned_cols=71  Identities=17%  Similarity=0.239  Sum_probs=53.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC-------cccchhcccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-------HALSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ++.|+|+|.+|.+++..|+..|.  +|++++|+.++++.++.++..       ..+...+.+  ...++|+||.+++.+.
T Consensus         2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~--~~~~aDvViiav~~~~   79 (319)
T 1a5z_A            2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA--DLKGSDVVIVAAGVPQ   79 (319)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG--GGTTCSEEEECCCCCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHH--HhCCCCEEEEccCCCC
Confidence            68999999999999999999998  999999999988887654421       001112222  2456899999999765


Q ss_pred             CC
Q 007151          454 QP  455 (616)
Q Consensus       454 ~p  455 (616)
                      .|
T Consensus        80 ~~   81 (319)
T 1a5z_A           80 KP   81 (319)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.02  E-value=0.0023  Score=65.64  Aligned_cols=37  Identities=32%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ++++++|+|+ |++|++++..|.+.|++|++++|+.++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            4689999998 899999999999999999999998654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.01  E-value=0.0017  Score=67.38  Aligned_cols=72  Identities=24%  Similarity=0.162  Sum_probs=50.3

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC--C--cc--cchhc---ccccCCC--CccEEE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG--G--HA--LSLAD---LENFNPE--DGMILA  446 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~--~--~~--~~~~~---l~~~~~~--~~divI  446 (616)
                      +++++++|+|+ |++|++++..|.+.|++|++++|+.++...+.+.+.  .  ..  .++.+   +.+ ...  .+|+||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~~~d~vi   85 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLE-SIREFQPEIVF   85 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHH-HHHHHCCSEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHH-HHHhcCCCEEE
Confidence            56789999997 899999999999999999999998765554444321  1  11  23322   211 111  379999


Q ss_pred             EcCCC
Q 007151          447 NTTSI  451 (616)
Q Consensus       447 nat~~  451 (616)
                      |+++.
T Consensus        86 h~A~~   90 (357)
T 1rkx_A           86 HMAAQ   90 (357)
T ss_dssp             ECCSC
T ss_pred             ECCCC
Confidence            99985

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.00  E-value=0.015  Score=60.65  Aligned_cols=73  Identities=19%  Similarity=0.266  Sum_probs=54.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-c-----cch--hcccccCCCCccEEEEcCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-A-----LSL--ADLENFNPEDGMILANTTS  450 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~-~-----~~~--~~l~~~~~~~~divInat~  450 (616)
                      .+++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++... .     +.+  .+.+  ...++|+||.+++
T Consensus         5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~--a~~~aDvVvi~ag   82 (326)
T 3pqe_A            5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYE--DCKDADIVCICAG   82 (326)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGG--GGTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHH--HhCCCCEEEEecc
Confidence            4689999999999999999999886  8999999999988876655321 0     011  1122  3456899999988


Q ss_pred             CCCCC
Q 007151          451 IGMQP  455 (616)
Q Consensus       451 ~gm~p  455 (616)
                      ....|
T Consensus        83 ~p~kp   87 (326)
T 3pqe_A           83 ANQKP   87 (326)
T ss_dssp             CCCCT
T ss_pred             cCCCC
Confidence            65444

>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1

Probab=95.99  E-value=0.024  Score=60.95  Aligned_cols=128  Identities=17%  Similarity=0.191  Sum_probs=80.1

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEE-EEEC----------CHHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVV-IANR----------TYDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~-v~nR----------t~~ka~~la~  422 (616)
                      +.|.+.+++..++.       .+.+++++++.|.|.|.+|..++..|.+.|++|+ +.++          +.+.+.++.+
T Consensus       190 g~Gv~~~~~~~~~~-------~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~  262 (421)
T 1v9l_A          190 GFGVAVATREMAKK-------LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKG  262 (421)
T ss_dssp             HHHHHHHHHHHHHH-------HHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred             HHHHHHHHHHHHHh-------cCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence            57777777765543       1257899999999999999999999999999766 7777          4566555443


Q ss_pred             HHCC------------ccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH-H
Q 007151          423 TVGG------------HAL-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR-E  488 (616)
Q Consensus       423 ~~~~------------~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~-~  488 (616)
                      +.+.            ..+ +-+++-   ...+|+++.|+--+..   +....  ..+ ..++|.+-.-.|- |+--. .
T Consensus       263 ~~g~~~v~~y~~~~~~~~~~~~~~~~---~~~~Dil~P~A~~~~I---~~~~a--~~l-~ak~V~EgAN~p~-t~~a~~~  332 (421)
T 1v9l_A          263 LTGPALVELFTTKDNAEFVKNPDAIF---KLDVDIFVPAAIENVI---RGDNA--GLV-KARLVVEGANGPT-TPEAERI  332 (421)
T ss_dssp             SCHHHHHHHHHHTSCCCCCSSTTGGG---GCCCSEEEECSCSSCB---CTTTT--TTC-CCSEEECCSSSCB-CHHHHHH
T ss_pred             hhCCccccccccccCceEeCCchhhh---cCCccEEEecCcCCcc---chhhH--HHc-CceEEEecCCCcC-CHHHHHH
Confidence            2111            111 112221   2358999998853321   11111  123 4578888887774 54322 2


Q ss_pred             HHHcCCeEEc
Q 007151          489 AEESGATIVS  498 (616)
Q Consensus       489 A~~~G~~~i~  498 (616)
                      -+++|+.+++
T Consensus       333 l~~~Gi~~~P  342 (421)
T 1v9l_A          333 LYERGVVVVP  342 (421)
T ss_dssp             HHTTTCEEEC
T ss_pred             HHHCCCEEeC
Confidence            2467888874

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.99  E-value=0.005  Score=63.85  Aligned_cols=113  Identities=18%  Similarity=0.151  Sum_probs=74.2

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GARVV-IANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .++.|+|+|.+|+..+.+|.+. +++|+ +++|+.+++++++++++..  +-+++++-+  ..+.|+|+.+||...+.  
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~i~tp~~~h~--   81 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCK--DETIDIIYIPTYNQGHY--   81 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHH--CTTCSEEEECCCGGGHH--
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhc--CCCCCEEEEcCCCHHHH--
Confidence            5899999999999999999986 55654 8999999999999998752  234544322  24589999999965431  


Q ss_pred             CCCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          458 DETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       458 ~~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                         ++....++.+ .++++  +..++.+ -.+.+.|+++|..+.-|..
T Consensus        82 ---~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~  126 (330)
T 3e9m_A           82 ---SAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQK  126 (330)
T ss_dssp             ---HHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred             ---HHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEh
Confidence               1222234333 34433  1112222 3456667778887766655

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=95.99  E-value=0.013  Score=61.26  Aligned_cols=71  Identities=15%  Similarity=0.223  Sum_probs=52.9

Q ss_pred             CCcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .|++|+|+| +||+|.+++..+...|++|++++|+.++.+.+ ++++... ++..+      +.+. ....+|++||+++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G  240 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG  240 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence            478999999 59999999999999999999999999887766 6666532 22221      1111 1235899999997


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       241 ~  241 (354)
T 2j8z_A          241 G  241 (354)
T ss_dssp             G
T ss_pred             c
Confidence            4

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.99  E-value=0.0083  Score=62.32  Aligned_cols=70  Identities=20%  Similarity=0.224  Sum_probs=52.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh--c----ccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--D----LENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~--~----l~~~~~~~~divInat~~  451 (616)
                      .|++|+|+|+||+|.+++..+...|++|+++.|+.++.+.+ ++++... ++..  +    +.+.. ..+|++||+++.
T Consensus       164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~d~~~~~~~~~~~~~~-~~~d~vid~~g~  240 (339)
T 1rjw_A          164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKV-GGVHAAVVTAVS  240 (339)
T ss_dssp             TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEECTTTSCHHHHHHHHH-SSEEEEEESSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEecCCCccHHHHHHHHh-CCCCEEEECCCC
Confidence            47899999999999999999999999999999998887654 5566532 3332  1    11111 468999999874

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.99  E-value=0.012  Score=61.23  Aligned_cols=113  Identities=13%  Similarity=0.113  Sum_probs=74.6

Q ss_pred             EEEEEccchhHHH-HHHHHHHC-CCeE-EEEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKA-LAYGAKAK-GARV-VIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       383 ~vlVlGAGGagrA-ia~~L~~~-G~~V-~v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      |+.|||+|.+|+. .+.++.+. +++| .|++|+.+++++++++++..  +-+++++-+  ..+.|+|+.+||...+.  
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~--~~~iDaV~I~tP~~~H~--  100 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLA--SDVIDAVYIPLPTSQHI--  100 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHH--CSSCSEEEECSCGGGHH--
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhc--CCCCCEEEEeCCCchhH--
Confidence            7999999999975 56777776 5665 58999999999999999863  235555422  24689999999976542  


Q ss_pred             CCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHH
Q 007151          458 DETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       458 ~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~M  502 (616)
                         ++....++.+. ++++  +..+..+ -.+++.|++.|..+.-|...
T Consensus       101 ---~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~  146 (350)
T 4had_A          101 ---EWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMI  146 (350)
T ss_dssp             ---HHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGG
T ss_pred             ---HHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeee
Confidence               12223343333 3322  1112222 45667788888887777653

>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A

Probab=95.98  E-value=0.19  Score=54.13  Aligned_cols=130  Identities=19%  Similarity=0.170  Sum_probs=79.6

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccc-cCCcEEEEEccchhHHHHHHHHHH-CCCeEEEEECC-----------HHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSA-LAGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRT-----------YDRAREL  420 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~-l~~k~vlVlGAGGagrAia~~L~~-~G~~V~v~nRt-----------~~ka~~l  420 (616)
                      +.|.+..++..++..       +.+ +++|++.|+|.|.+|+.++..|.. .|++|+.+++.           .+...++
T Consensus       191 g~Gv~~~~~~~~~~~-------G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~~gvdl~~L~~~  263 (419)
T 1gtm_A          191 ARGASYTIREAAKVL-------GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKW  263 (419)
T ss_dssp             HHHHHHHHHHHHHHT-------TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHH
T ss_pred             hhHHHHHHHHHHHHh-------CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCccCCCHHHHHHH
Confidence            577777776655431       246 899999999999999999999999 99998877543           5555555


Q ss_pred             HHHHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH-HHHHHHc
Q 007151          421 AETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREAEES  492 (616)
Q Consensus       421 a~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l-l~~A~~~  492 (616)
                      ++....       ..++-+++..  . +.|++|||+-.+..   ++..+  ..|+. ..+....-.|. |+- -..-+..
T Consensus       264 ~d~~~~l~~l~~t~~i~~~~l~~--m-k~dilIn~ArG~~V---de~a~--~aL~~-~~I~~aAneP~-t~~a~~ll~~~  333 (419)
T 1gtm_A          264 KNEHGSVKDFPGATNITNEELLE--L-EVDVLAPAAIEEVI---TKKNA--DNIKA-KIVAEVANGPV-TPEADEILFEK  333 (419)
T ss_dssp             HHHHSSSTTCTTSEEECHHHHHH--S-CCSEEEECSCSCCB---CTTGG--GGCCC-SEEECCSSSCB-CHHHHHHHHHT
T ss_pred             HHhcCEeecCccCeeeCHHHHHh--C-CCCEEEECCCcccC---CHHHH--HHhcC-CEEEEeeCCCC-CcchHHHHhcC
Confidence            544221       1111122222  2 35899999864432   22222  23433 55666654453 332 2233467


Q ss_pred             CCeEEccH
Q 007151          493 GATIVSGL  500 (616)
Q Consensus       493 G~~~i~Gl  500 (616)
                      |+.+.+..
T Consensus       334 ~V~itPhi  341 (419)
T 1gtm_A          334 GILQIPDF  341 (419)
T ss_dssp             TCEEECHH
T ss_pred             CEEEECch
Confidence            88887665

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.97  E-value=0.013  Score=60.63  Aligned_cols=73  Identities=21%  Similarity=0.209  Sum_probs=52.6

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCC-------c-ccch-hcccccCCCCccEEEEcCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-------H-ALSL-ADLENFNPEDGMILANTTS  450 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~-------~-~~~~-~~l~~~~~~~~divInat~  450 (616)
                      .+++.|+|+|.+|.+++..|+..|. +|++++|+.++++..+.++..       . .+.. .+.+  ...++|+||.+++
T Consensus         4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~--a~~~aDiVi~avg   81 (317)
T 2ewd_A            4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYA--DISGSDVVIITAS   81 (317)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGG--GGTTCSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHH--HhCCCCEEEEeCC
Confidence            3589999999999999999999998 999999998877764322210       0 1111 2332  2456899999998


Q ss_pred             CCCCC
Q 007151          451 IGMQP  455 (616)
Q Consensus       451 ~gm~p  455 (616)
                      .+..|
T Consensus        82 ~p~~~   86 (317)
T 2ewd_A           82 IPGRP   86 (317)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            76554

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.97  E-value=0.01  Score=61.80  Aligned_cols=113  Identities=18%  Similarity=0.185  Sum_probs=74.1

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCeE-EEEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GARV-VIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~V-~v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .++.|+|+|.+|+..+..|.+. ++++ .|++|+.++++++++.++..  +-+++++-+  ..+.|+|+.+||...+.  
T Consensus         3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~i~tp~~~h~--   78 (344)
T 3ezy_A            3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIE--DPNVDAVLVCSSTNTHS--   78 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHH--CTTCCEEEECSCGGGHH--
T ss_pred             eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhc--CCCCCEEEEcCCCcchH--
Confidence            3799999999999999999876 5665 58999999999999998753  234544322  23689999999965321  


Q ss_pred             CCCccccccccCcc-EEEEE--eeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          458 DETPIPKHALGHYA-LVFDA--VYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       458 ~~~pi~~~~l~~~~-~v~Di--~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                         ++....++.+. ++++=  ..++.+ -.+.+.|++.|..+.-|..
T Consensus        79 ---~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~  123 (344)
T 3ezy_A           79 ---ELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFN  123 (344)
T ss_dssp             ---HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECG
T ss_pred             ---HHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeec
Confidence               12223344443 44331  122222 3456667777877766655

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=95.96  E-value=0.0039  Score=65.51  Aligned_cols=41  Identities=29%  Similarity=0.310  Sum_probs=38.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ++.|+|+|.+|.+++..|++.|.+|++++|+.++++.+.+.
T Consensus        17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~   57 (366)
T 1evy_A           17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   57 (366)
T ss_dssp             EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHH
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence            79999999999999999999999999999999999888765

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.95  E-value=0.0077  Score=63.54  Aligned_cols=43  Identities=28%  Similarity=0.372  Sum_probs=39.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ..++.|+|+|.+|.+++..|++.|.+|++++|++++++.+.+.
T Consensus        29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~   71 (356)
T 3k96_A           29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAE   71 (356)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred             CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence            4589999999999999999999999999999999999888765

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.94  E-value=0.0012  Score=68.17  Aligned_cols=39  Identities=21%  Similarity=0.175  Sum_probs=32.2

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      ..+++++++|+|+ |++|++++..|.+.|++|++++|+..
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~   56 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT   56 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence            4567899999997 89999999999999999999999743

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=95.93  E-value=0.013  Score=60.53  Aligned_cols=71  Identities=17%  Similarity=0.305  Sum_probs=52.6

Q ss_pred             CCcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .|++|+|+| +|++|.+++..+...|++|+++.|+.++.+.+ .+++... ++..+      +.+. ....+|+++|+++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  218 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG  218 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence            578999999 59999999999999999999999999887654 5676532 22211      1111 1236899999988


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       219 ~  219 (325)
T 3jyn_A          219 Q  219 (325)
T ss_dssp             G
T ss_pred             h
Confidence            4

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=95.92  E-value=0.004  Score=75.78  Aligned_cols=48  Identities=23%  Similarity=0.432  Sum_probs=39.9

Q ss_pred             cccCCcEEEEEcc-ch-hHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHH
Q 007151          377 SALAGKLFVVIGA-GG-AGKALAYGAKAKGARVVIA-NRTYDRARELAETV  424 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GG-agrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~  424 (616)
                      .++++|++||+|+ || +|+++|..|++.|++|+++ +|+.++++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL  522 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  522 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHT
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHH
Confidence            4678999999998 46 9999999999999999887 68776666666555

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.90  E-value=0.018  Score=60.69  Aligned_cols=71  Identities=25%  Similarity=0.412  Sum_probs=53.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchh------cccc---cCCCCccEEEEc
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA------DLEN---FNPEDGMILANT  448 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~------~l~~---~~~~~~divIna  448 (616)
                      .|++|+|+|+|++|.+++..+...|+ +|++++++.++.+ ++++++... ++..      .+.+   ...+.+|+++++
T Consensus       182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~  260 (370)
T 4ej6_A          182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC  260 (370)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence            47899999999999999999999999 8999999988755 677787642 2321      1111   112368999999


Q ss_pred             CCC
Q 007151          449 TSI  451 (616)
Q Consensus       449 t~~  451 (616)
                      ++.
T Consensus       261 ~G~  263 (370)
T 4ej6_A          261 AGV  263 (370)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.89  E-value=0.0035  Score=63.62  Aligned_cols=109  Identities=20%  Similarity=0.256  Sum_probs=67.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCCC-
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDET-  460 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~~-  460 (616)
                      ++.|+|+|.+|++++..|.+.|.+|++++|+.++++.+.+. +... .+.++.    ..++|+||-++|....  .... 
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~----~~~~Dvvi~~vp~~~~--~~~v~   74 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-GEQVVSSPADV----AEKADRIITMLPTSIN--AIEAY   74 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-TCEECSSHHHH----HHHCSEEEECCSSHHH--HHHHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeecCCHHHH----HhcCCEEEEeCCCHHH--HHHHH
Confidence            58899999999999999999999999999999998887653 2221 122221    2347999999874311  0000 


Q ss_pred             -ccc--cccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEc
Q 007151          461 -PIP--KHALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  498 (616)
Q Consensus       461 -pi~--~~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~  498 (616)
                       .+.  ...+.++.+++|..-.+..+  .+.+...+.|....+
T Consensus        75 ~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~  117 (296)
T 2gf2_A           75 SGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMD  117 (296)
T ss_dssp             HSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             hCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence             000  01345677889954433322  122334455655544

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.88  E-value=0.0086  Score=65.37  Aligned_cols=70  Identities=23%  Similarity=0.331  Sum_probs=57.4

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInat~~  451 (616)
                      .+++|+|+|..|+.+|..|.+.|.+|+++++++++.+.+.++++...+     +.+-+.+....++|++|-+|+-
T Consensus         4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~   78 (461)
T 4g65_A            4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT   78 (461)
T ss_dssp             EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence            579999999999999999999999999999999999999998875432     2233444356779999988874

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.88  E-value=0.022  Score=58.56  Aligned_cols=71  Identities=24%  Similarity=0.348  Sum_probs=50.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cchhcccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      ++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++....       +...+.+  ...++|+||.+++...
T Consensus         2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~--a~~~aDvVIi~~~~~~   79 (304)
T 2v6b_A            2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHS--ELADAQVVILTAGANQ   79 (304)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGG--GGTTCSEEEECC----
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHH--HhCCCCEEEEcCCCCC
Confidence            78999999999999999999997  89999999998887776664211       1112222  3457899999997654


Q ss_pred             CC
Q 007151          454 QP  455 (616)
Q Consensus       454 ~p  455 (616)
                      .|
T Consensus        80 ~~   81 (304)
T 2v6b_A           80 KP   81 (304)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.88  E-value=0.017  Score=60.24  Aligned_cols=75  Identities=20%  Similarity=0.225  Sum_probs=53.5

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCC-------c-ccc-hhcccccCCCCccEEEEc
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG-------H-ALS-LADLENFNPEDGMILANT  448 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~-------~-~~~-~~~l~~~~~~~~divIna  448 (616)
                      .+.+++.|+|||.+|.++++.|+..|. +|++++++.++++..+.++..       . .+. ..+.+  ...++|+||.+
T Consensus         5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~--a~~~aDiVIia   82 (324)
T 3gvi_A            5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYA--AIEGADVVIVT   82 (324)
T ss_dssp             -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGG--GGTTCSEEEEC
T ss_pred             CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHH--HHCCCCEEEEc
Confidence            456789999999999999999999998 999999998887655444321       1 011 12232  34678999999


Q ss_pred             CCCCCCC
Q 007151          449 TSIGMQP  455 (616)
Q Consensus       449 t~~gm~p  455 (616)
                      ++....|
T Consensus        83 ag~p~k~   89 (324)
T 3gvi_A           83 AGVPRKP   89 (324)
T ss_dssp             CSCCCC-
T ss_pred             cCcCCCC
Confidence            9865444

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.87  E-value=0.021  Score=59.93  Aligned_cols=70  Identities=23%  Similarity=0.293  Sum_probs=52.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh--c----cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA--D----LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~--~----l~~~-~~~~~divInat~  450 (616)
                      .|++|+|+|+|++|.+++..+...|++|+++.++.++.+. +++++... ++.+  +    +.+. ....+|+++++++
T Consensus       189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g  266 (363)
T 3uog_A          189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG  266 (363)
T ss_dssp             TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHH-HHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence            5789999999999999999999999999999999888765 56677542 2211  1    1111 1236899999998

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.83  E-value=0.0059  Score=62.26  Aligned_cols=69  Identities=16%  Similarity=0.243  Sum_probs=48.1

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH-HHHHHHH--HHCCcc--cchhc---ccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD-RARELAE--TVGGHA--LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~-ka~~la~--~~~~~~--~~~~~---l~~~~~~~~divInat~~  451 (616)
                      ++++|+|| |++|++++.+|.+.|++|+++.|+.+ +++.+.+  ..+...  .++.+   +.. ...++|+||++++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~-a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVE-LMKKVDVVISALAF   89 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHH-HHTTCSEEEECCCG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHH-HHcCCCEEEECCch
Confidence            57999997 89999999999999999999999864 4333321  112222  23333   222 24568999999874

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.82  E-value=0.01  Score=61.75  Aligned_cols=113  Identities=17%  Similarity=0.181  Sum_probs=70.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GARVV-IANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      .++.|+|+|.+|+..+..|.+. +++|+ +++|+.+++++++++++... -+++++-+  ..+.|+|+.+||...+.   
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~---   79 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFA--RDDIDGIVIGSPTSTHV---   79 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTT--CSCCCEEEECSCGGGHH---
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhc--CCCCCEEEEeCCchhhH---
Confidence            4799999999999999999987 56654 89999999999999887432 23443321  23689999999865321   


Q ss_pred             CCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          459 ETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       459 ~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                        ++....++.+ .++++  +..++.+ -.+.+.|++.|..+.-|..
T Consensus        80 --~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~  124 (344)
T 3euw_A           80 --DLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN  124 (344)
T ss_dssp             --HHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG
T ss_pred             --HHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch
Confidence              1112233333 33332  1111121 2345556666766655544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.82  E-value=0.0025  Score=65.42  Aligned_cols=69  Identities=22%  Similarity=0.227  Sum_probs=46.1

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      .+++|+|+ |++|++++..|.+.|++|+++.|+.++.+.+.+ .+...  .++.+   +.+ ...+.|+|||+++..
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLER-ALRGLDGVIFSAGYY   88 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHH-HTTTCSEEEEC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHH-HHcCCCEEEECCccC
Confidence            48999997 899999999999999999999998765544321 11111  23322   222 245689999998753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.81  E-value=0.0039  Score=64.98  Aligned_cols=39  Identities=23%  Similarity=0.413  Sum_probs=34.5

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHH--CCCeEEEEECCHH
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKA--KGARVVIANRTYD  415 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~--~G~~V~v~nRt~~  415 (616)
                      .++.+++|+|+|+ |++|++++..|.+  .|++|++++|+..
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            3567899999997 8999999999999  8999999999654

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.81  E-value=0.0072  Score=62.78  Aligned_cols=113  Identities=12%  Similarity=0.104  Sum_probs=72.0

Q ss_pred             cEEEEEccchhHHHHHHHHH-HC-CCe-EEEEECCHHHHHHHHHHHCCc-c-cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAK-AK-GAR-VVIANRTYDRARELAETVGGH-A-LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~-~~-G~~-V~v~nRt~~ka~~la~~~~~~-~-~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      .++.|+|+|.+|+..+..|. +. |++ +.+++|+.+++++++++++.. . -+++++-+  ..++|+|+.+||...+. 
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~--~~~~D~V~i~tp~~~h~-   85 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMID--TENIDAIFIVAPTPFHP-   85 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHT--TSCCSEEEECSCGGGHH-
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhc--CCCCCEEEEeCChHhHH-
Confidence            58999999999999999988 54 566 568999999999999888752 2 23443321  23589999999864321 


Q ss_pred             CCCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHc-CCeEEccHH
Q 007151          457 VDETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEES-GATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~-G~~~i~Gl~  501 (616)
                          ++....++.+. ++++  +..++.+ ..+.+.|++. |..+.-|..
T Consensus        86 ----~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~  131 (346)
T 3cea_A           86 ----EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFM  131 (346)
T ss_dssp             ----HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCG
T ss_pred             ----HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecc
Confidence                12223444444 3333  1112211 2355666777 877766544

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=95.81  E-value=0.016  Score=59.82  Aligned_cols=44  Identities=18%  Similarity=0.290  Sum_probs=37.9

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ...+++.|+|+|.+|.+++..|++.|.+|+++ |+.++++++.+.
T Consensus        17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~   60 (318)
T 3hwr_A           17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT   60 (318)
T ss_dssp             ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH
T ss_pred             ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC
Confidence            34578999999999999999999999999999 988888888764

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=95.80  E-value=0.0039  Score=67.07  Aligned_cols=116  Identities=14%  Similarity=0.184  Sum_probs=74.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+++|..+...|++|+.++|+....      .+ ......++++ ...++|+|+.++|..-.  
T Consensus       152 ~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~------~~-~~~~~~sl~e-ll~~aDvV~lhvPlt~~--  221 (416)
T 3k5p_A          152 REVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ------YG-NVKPAASLDE-LLKTSDVVSLHVPSSKS--  221 (416)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC------BT-TBEECSSHHH-HHHHCSEEEECCCC-----
T ss_pred             ccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc------cc-CcEecCCHHH-HHhhCCEEEEeCCCCHH--
Confidence            46889999999999999999999999999999999973211      00 0111112222 13357999999987421  


Q ss_pred             CCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      + ...+...   .++++.+++|+.-.+. ++.-+.+|-+.|...--|++++
T Consensus       222 T-~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf  271 (416)
T 3k5p_A          222 T-SKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVF  271 (416)
T ss_dssp             ---CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCC
T ss_pred             H-hhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCC
Confidence            1 1224332   3567888888887644 5666666767765544555543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.80  E-value=0.017  Score=60.86  Aligned_cols=70  Identities=23%  Similarity=0.281  Sum_probs=52.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc---ccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~---l~~~~~~~~divInat~~  451 (616)
                      .|.+|+|+|+|++|.+++..+...|++|+++.++.++.+.+ ++++... ++..+   +.+ ....+|++|++++.
T Consensus       194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~-~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAA-HLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEETTCHHHHHT-TTTCEEEEEECCSS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEeccccHHHHHH-hhcCCCEEEECCCC
Confidence            47899999999999999999999999999999998876644 4677543 33321   222 12468999999985

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.80  E-value=0.011  Score=57.40  Aligned_cols=52  Identities=17%  Similarity=0.235  Sum_probs=40.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ..+..+++.|+|+|.+|.+++..|++.|.+|++++|+.+                      ...++|+||-++|
T Consensus        15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------------~~~~aD~vi~av~   66 (209)
T 2raf_A           15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------------ATTLGEIVIMAVP   66 (209)
T ss_dssp             -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------------CSSCCSEEEECSC
T ss_pred             cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------------HhccCCEEEEcCC
Confidence            346678999999999999999999999999999999754                      1234788888887

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.80  E-value=0.0043  Score=63.08  Aligned_cols=99  Identities=15%  Similarity=0.120  Sum_probs=48.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc---ccccCCC--CccEEEEcCCCCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD---LENFNPE--DGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~~~~--~~divInat~~gm~  454 (616)
                      +++++|+|+ |++|++++..|.+.|++|++++|+.++..       ....++.+   +.+ ...  .+|+|||+++....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~Dl~d~~~~~~-~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-------FEQVNLLDSNAVHH-IIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------CHH-HHHHHCCSEEEECC-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-------eEEecCCCHHHHHH-HHHhhCCCEEEECCcccCh
Confidence            578999998 89999999999999999999998765411       01112222   211 111  37999999875321


Q ss_pred             CCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEE
Q 007151          455 PKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIV  497 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i  497 (616)
                      ..         ........++++.. ....+++.|++.|.+++
T Consensus        74 ~~---------~~~~~~~~~~~n~~-~~~~l~~a~~~~~~~~v  106 (315)
T 2ydy_A           74 DV---------VENQPDAASQLNVD-ASGNLAKEAAAVGAFLI  106 (315)
T ss_dssp             -----------------------CH-HHHHHHHHHHHHTCEEE
T ss_pred             hh---------hhcCHHHHHHHHHH-HHHHHHHHHHHcCCeEE
Confidence            10         01111233444432 12345666666666654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.79  E-value=0.0082  Score=63.11  Aligned_cols=72  Identities=15%  Similarity=0.145  Sum_probs=51.1

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEE----------ECC---------HHHHHHHHHHHCC--ccc------
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIA----------NRT---------YDRARELAETVGG--HAL------  429 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~----------nRt---------~~ka~~la~~~~~--~~~------  429 (616)
                      .+++++|+|+|+||+|..++..|+..|+ +++|+          +|.         ..|++.+++.+..  ..+      
T Consensus        33 ~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           33 RLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            3567899999999999999999999999 99999          453         3478877776642  111      


Q ss_pred             -chhc-ccccCCCCccEEEEcCC
Q 007151          430 -SLAD-LENFNPEDGMILANTTS  450 (616)
Q Consensus       430 -~~~~-l~~~~~~~~divInat~  450 (616)
                       .+++ ..+ ...++|+||+|+-
T Consensus       113 ~~~~~~~~~-~~~~~dvVv~~~d  134 (346)
T 1y8q_A          113 EDIEKKPES-FFTQFDAVCLTCC  134 (346)
T ss_dssp             SCGGGCCHH-HHTTCSEEEEESC
T ss_pred             cccCcchHH-HhcCCCEEEEcCC
Confidence             1111 111 2356899999864

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.78  E-value=0.018  Score=59.85  Aligned_cols=74  Identities=23%  Similarity=0.245  Sum_probs=54.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc------ccch---hcccccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH------ALSL---ADLENFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~------~~~~---~~l~~~~~~~~divInat  449 (616)
                      +.+++.|+|+|.+|.++++.|+..|. +|++++++.++++..+.++...      ...+   .+.+  ...++|+||.++
T Consensus         4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~--a~~~aDvVIi~a   81 (321)
T 3p7m_A            4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYK--DLENSDVVIVTA   81 (321)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--GGTTCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHH--HHCCCCEEEEcC
Confidence            35689999999999999999999888 9999999998887766555321      1111   1222  346789999999


Q ss_pred             CCCCCC
Q 007151          450 SIGMQP  455 (616)
Q Consensus       450 ~~gm~p  455 (616)
                      +....|
T Consensus        82 g~p~k~   87 (321)
T 3p7m_A           82 GVPRKP   87 (321)
T ss_dssp             SCCCCT
T ss_pred             CcCCCC
Confidence            865444

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.78  E-value=0.011  Score=60.94  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=47.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH----------HHHHHHHHHHCCc--c--cchhc---ccccCCC--
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY----------DRARELAETVGGH--A--LSLAD---LENFNPE--  440 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~----------~ka~~la~~~~~~--~--~~~~~---l~~~~~~--  440 (616)
                      +++++|+|+ |++|++++..|.+.|++|++++|+.          +..+.+.+..+..  .  .++.+   +.+ ...  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~-~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR-LFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH-HHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH-HHHhc
Confidence            478999997 8999999999999999999998742          3344443322221  1  23322   221 112  


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ++|+|||+++..
T Consensus        81 ~~d~vih~A~~~   92 (348)
T 1ek6_A           81 SFMAVIHFAGLK   92 (348)
T ss_dssp             CEEEEEECCSCC
T ss_pred             CCCEEEECCCCc
Confidence            589999998854

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.77  E-value=0.0097  Score=66.03  Aligned_cols=73  Identities=18%  Similarity=0.176  Sum_probs=49.6

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCC-eEEEE-ECC-------------HHHHHHHHHHH---CCcc----cchhcc--
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIA-NRT-------------YDRARELAETV---GGHA----LSLADL--  434 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~-~V~v~-nRt-------------~~ka~~la~~~---~~~~----~~~~~l--  434 (616)
                      .++++||+|+ ||+|++++..|++.|+ .|+++ +|+             .++++++.+++   +...    +|+.+.  
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999997 7999999999999999 48888 898             35555665554   3221    233221  


Q ss_pred             -ccc-----CCCCccEEEEcCCCC
Q 007151          435 -ENF-----NPEDGMILANTTSIG  452 (616)
Q Consensus       435 -~~~-----~~~~~divInat~~g  452 (616)
                       ..+     .....|+|||++++.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~  353 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTV  353 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCC
Confidence             110     134689999999875

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.76  E-value=0.019  Score=63.10  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=38.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      ++|.|||+|-||.++|..|++.|.+|++++|+.++++++.+.
T Consensus         6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            579999999999999999999999999999999998887654

>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A

Probab=95.75  E-value=0.1  Score=49.99  Aligned_cols=118  Identities=20%  Similarity=0.198  Sum_probs=76.1

Q ss_pred             EEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhC--CCcEEE-EeccCCCCCCCCCCHHHHH
Q 007151           25 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKES--PVPTLF-TYRPIWEGGQYDGDENERV  101 (616)
Q Consensus        25 ~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~--~~PiI~-T~Rt~~eGG~~~~~~e~~~  101 (616)
                      .+...+...|.+++...++.+.+.|+|++|+-+..   ....+.++.+++..  +.++-. |+.          +.++  
T Consensus        11 ~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v~----------~~~~--   75 (205)
T 1wa3_A           11 KIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTVT----------SVEQ--   75 (205)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESCC----------SHHH--
T ss_pred             CEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEecccC----------CHHH--
Confidence            35567889999999988888878899999986543   12233466666543  344333 221          3332  


Q ss_pred             HHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Q 007151          102 DVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFA  173 (616)
Q Consensus       102 ~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia  173 (616)
                        .+.+.+.|+||| +--....+..+...   ..+..+|.-.|    ||  .+    ..++.+.|+|++|+-
T Consensus        76 --~~~a~~~Gad~i-v~~~~~~~~~~~~~---~~g~~vi~g~~----t~--~e----~~~a~~~Gad~vk~~  131 (205)
T 1wa3_A           76 --CRKAVESGAEFI-VSPHLDEEISQFCK---EKGVFYMPGVM----TP--TE----LVKAMKLGHTILKLF  131 (205)
T ss_dssp             --HHHHHHHTCSEE-ECSSCCHHHHHHHH---HHTCEEECEEC----SH--HH----HHHHHHTTCCEEEET
T ss_pred             --HHHHHHcCCCEE-EcCCCCHHHHHHHH---HcCCcEECCcC----CH--HH----HHHHHHcCCCEEEEc
Confidence              466777899999 76666555554443   24677776444    33  23    446678999999973

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.75  E-value=0.0031  Score=63.36  Aligned_cols=68  Identities=16%  Similarity=0.077  Sum_probs=48.4

Q ss_pred             EEEEEcc-chhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      +++|+|| |++|++++..|.+. |++|+++.|+.+++..+... +...  .++.+   +.+ ...++|+||++++..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~-~v~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~~   76 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG-KVSVRQLDYFNQESMVE-AFKGMDTVVFIPSII   76 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBT-TBEEEECCTTCHHHHHH-HTTTCSEEEECCCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhC-CCEEEEcCCCCHHHHHH-HHhCCCEEEEeCCCC
Confidence            5899997 89999999999998 88999999998875543211 1111  23332   222 355789999998753

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.74  E-value=0.013  Score=60.80  Aligned_cols=71  Identities=18%  Similarity=0.166  Sum_probs=53.0

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHCCcc-cchhc----cccc-CCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHA-LSLAD----LENF-NPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~--G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~----l~~~-~~~~~divInat~~  451 (616)
                      .|++|+|+|+|++|.+++..+...  |++|+++.++.++.+. +++++... ++..+    ..+. ....+|+++++++.
T Consensus       170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~  248 (344)
T 2h6e_A          170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDF-ALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGT  248 (344)
T ss_dssp             SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH-HHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH-HHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCC
Confidence            688999999999999999999888  9999999999888654 45677542 33322    1111 12368999999984

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.73  E-value=0.011  Score=61.26  Aligned_cols=112  Identities=14%  Similarity=0.103  Sum_probs=74.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCC---Ce-EEEEECCHHHHHHHHHHHCCc--ccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG---AR-VVIANRTYDRARELAETVGGH--ALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G---~~-V~v~nRt~~ka~~la~~~~~~--~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++.|+|+|.+|+..+.+|.+.+   ++ +.|++|+.+++++++++++..  +-+++++-+  ..+.|+|+.+||...+. 
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~--~~~vD~V~i~tp~~~H~-   80 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAK--DPNVEVAYVGTQHPQHK-   80 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHH--CTTCCEEEECCCGGGHH-
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhc--CCCCCEEEECCCcHHHH-
Confidence            7899999999999999988764   33 668999999999999999863  234554432  24689999999865432 


Q ss_pred             CCCCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                          ++....++.+ .++++  +..++.+ -.+.+.|+++|....-|..
T Consensus        81 ----~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~  125 (334)
T 3ohs_X           81 ----AAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIW  125 (334)
T ss_dssp             ----HHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred             ----HHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEh
Confidence                1222334443 34444  2222222 3466777788887776655

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.72  E-value=0.01  Score=59.96  Aligned_cols=69  Identities=25%  Similarity=0.286  Sum_probs=48.3

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCC-CeEEEEECCHHHH--HHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKG-ARVVIANRTYDRA--RELAETVGGHA--LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G-~~V~v~nRt~~ka--~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~  451 (616)
                      .++++|+|+ |++|++++..|.+.| ++|+++.|+.++.  +.+.. .+...  .++.+   +.. ...+.|+||++++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMEL-ALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHH-HHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHH-HHhcCCEEEEeCCC
Confidence            478999998 899999999999999 8999999987653  22322 12222  23333   222 24568999998863

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.72  E-value=0.025  Score=60.04  Aligned_cols=72  Identities=22%  Similarity=0.245  Sum_probs=53.5

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhc-------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLAD-------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~-------l~~~-~~~~~divInat~  450 (616)
                      .|++|+|+|+|++|..++..+...|+ +|++++++.++.+. +++++...++..+       +.+. ....+|+++++++
T Consensus       185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G  263 (398)
T 1kol_A          185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH-AKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG  263 (398)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH-HHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence            47899999999999999999999999 79999999888654 4677765443321       1111 1235899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus       264 ~~  265 (398)
T 1kol_A          264 FE  265 (398)
T ss_dssp             TT
T ss_pred             Cc
Confidence            53

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=95.72  E-value=0.0055  Score=61.97  Aligned_cols=65  Identities=29%  Similarity=0.385  Sum_probs=43.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeE-EEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARV-VIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V-~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      ++.|+|+|.+|.+++..|.+. .+| .+++|+.++++++++.++. .  ..+..+ ...++|+||-++|..
T Consensus         4 ~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~--~~~~~~-~~~~~DvVilav~~~   69 (276)
T 2i76_A            4 VLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-K--AATLEK-HPELNGVVFVIVPDR   69 (276)
T ss_dssp             CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-C--CCSSCC-CCC---CEEECSCTT
T ss_pred             eEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-c--cCCHHH-HHhcCCEEEEeCChH
Confidence            588999999999999999887 888 5999999999999887764 2  122222 233467777777654

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=95.72  E-value=0.012  Score=63.71  Aligned_cols=114  Identities=10%  Similarity=0.115  Sum_probs=74.1

Q ss_pred             CcEEEEEccchhHH-HHHHHHHHC-CCe-EEEEECCHHHHHHHHHHHCCc------ccchhcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGK-ALAYGAKAK-GAR-VVIANRTYDRARELAETVGGH------ALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagr-Aia~~L~~~-G~~-V~v~nRt~~ka~~la~~~~~~------~~~~~~l~~~~~~~~divInat~~  451 (616)
                      .-++.|+|+|.+|+ ..+..|.+. +++ +.|++|+.+++++++++++..      +-+++++-+  ..+.|+|+.+||.
T Consensus        83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~--~~~vD~V~iatp~  160 (433)
T 1h6d_A           83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAK--DPKIDAVYIILPN  160 (433)
T ss_dssp             CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGG--CTTCCEEEECSCG
T ss_pred             ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhc--CCCCCEEEEcCCc
Confidence            34899999999997 888888776 456 568999999999999998753      123333321  2368999999996


Q ss_pred             CCCCCCCCCccccccccCcc-EEEE--EeeCCcc-cHHHHHHHHcCCeEEccHH
Q 007151          452 GMQPKVDETPIPKHALGHYA-LVFD--AVYTPKI-TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       452 gm~p~~~~~pi~~~~l~~~~-~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~  501 (616)
                      ..+.     ++....++.+. ++++  +..+..+ -.+.+.|++.|..+.-|..
T Consensus       161 ~~h~-----~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~  209 (433)
T 1h6d_A          161 SLHA-----EFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYR  209 (433)
T ss_dssp             GGHH-----HHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred             hhHH-----HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEec
Confidence            5432     12223344443 4444  2222222 3466677788887776655

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=95.71  E-value=0.02  Score=59.43  Aligned_cols=70  Identities=21%  Similarity=0.308  Sum_probs=52.4

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .+++++|+|+ ||+|++++..+...|++|+++.|+.++.+.+ ++++... ++..+      +.+. ....+|++||+++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  244 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG  244 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence            4789999999 8999999999999999999999998887665 4566432 23221      1111 1236899999998

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.70  E-value=0.018  Score=59.56  Aligned_cols=74  Identities=20%  Similarity=0.272  Sum_probs=54.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc--c----c--chhcccccCCCCccEEEEcCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--A----L--SLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~--~----~--~~~~l~~~~~~~~divInat~  450 (616)
                      .+++.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++...  .    .  ...+. + ...++|+||.++|
T Consensus         6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~-~-al~~aDvViia~~   83 (316)
T 1ldn_A            6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-D-DCRDADLVVICAG   83 (316)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-G-GTTTCSEEEECCS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcH-H-HhCCCCEEEEcCC
Confidence            3689999999999999999988775  8999999988777665544211  0    0  01111 2 3567999999999


Q ss_pred             CCCCCC
Q 007151          451 IGMQPK  456 (616)
Q Consensus       451 ~gm~p~  456 (616)
                      ++..|.
T Consensus        84 ~~~~~g   89 (316)
T 1ldn_A           84 ANQKPG   89 (316)
T ss_dssp             CCCCTT
T ss_pred             CCCCCC
Confidence            876654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=95.69  E-value=0.015  Score=60.46  Aligned_cols=71  Identities=25%  Similarity=0.348  Sum_probs=51.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cch-hcc----ccc-CCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL-ADL----ENF-NPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~-~~l----~~~-~~~~~divInat~~  451 (616)
                      .|++|+|+|+ |++|.+++..+...|++|+++.|+.++.+ ++.+++... ++. +++    .+. ....+|+++|+++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence            5789999998 99999999999999999999999888765 455566543 222 111    111 12368999999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=95.69  E-value=0.016  Score=60.69  Aligned_cols=71  Identities=14%  Similarity=0.216  Sum_probs=52.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcc-cchhc-----ccccC-CCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA-LSLAD-----LENFN-PEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~-----l~~~~-~~~~divInat~~  451 (616)
                      .|++|+|+|+|++|..++..+... |++|++++++.++.+.+ ++++... ++..+     +.+.. ...+|+++++++.
T Consensus       186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~v~~~~~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  264 (359)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCEEEeccchHHHHHHHHhCCCCCcEEEECCCC
Confidence            478999999999999999988888 99999999998886554 5777542 33321     11111 2268999999984

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.69  E-value=0.0083  Score=62.97  Aligned_cols=116  Identities=15%  Similarity=0.101  Sum_probs=73.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      .+++.|||.|-+|.+++..|.+.|.+|++++|+.++++.+ .+.+... .+.++.-.-...++|+||-++|......   
T Consensus         8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a-~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~---   83 (341)
T 3ktd_A            8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSA-VDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDS---   83 (341)
T ss_dssp             SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH-HHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHH---
T ss_pred             CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHH---
Confidence            3579999999999999999999999999999999887765 3444422 1222211100123699999999542110   


Q ss_pred             Ccccc-ccccCccEEEEEeeCCcccHHHHHHHHc--CCeEEccHHHH
Q 007151          460 TPIPK-HALGHYALVFDAVYTPKITRLLREAEES--GATIVSGLEMF  503 (616)
Q Consensus       460 ~pi~~-~~l~~~~~v~Di~Y~P~~T~ll~~A~~~--G~~~i~Gl~ML  503 (616)
                       .+.. ..+.++.++.|+.-.  .+..++..++.  +..++++-.|.
T Consensus        84 -vl~~l~~~~~~~iv~Dv~Sv--k~~i~~~~~~~~~~~~~v~~HPma  127 (341)
T 3ktd_A           84 -LLDAVHTHAPNNGFTDVVSV--KTAVYDAVKARNMQHRYVGSHPMA  127 (341)
T ss_dssp             -HHHHHHHHCTTCCEEECCSC--SHHHHHHHHHTTCGGGEECEEECC
T ss_pred             -HHHHHHccCCCCEEEEcCCC--ChHHHHHHHHhCCCCcEecCCccc
Confidence             0110 113566889998654  23444555544  34577666655

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.69  E-value=0.0032  Score=63.06  Aligned_cols=68  Identities=19%  Similarity=0.171  Sum_probs=49.5

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAK--GARVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~--G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~  451 (616)
                      |+++|+|+ |++|++++..|.+.  |++|+++.|+.++++.+... +...  .++.+   +.+ ...+.|+||++++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~   76 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ-GVEVRHGDYNQPESLQK-AFAGVSKLLFISGP   76 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHT-TCEEEECCTTCHHHHHH-HTTTCSEEEECCCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhc-CCeEEEeccCCHHHHHH-HHhcCCEEEEcCCC
Confidence            46999998 89999999999998  88999999998776655431 2221  23332   323 34568999999875

>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}

Probab=95.68  E-value=0.22  Score=49.13  Aligned_cols=118  Identities=16%  Similarity=0.141  Sum_probs=72.5

Q ss_pred             HHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCCcE
Q 007151           35 VDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADY  114 (616)
Q Consensus        35 ~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~dy  114 (616)
                      ...+.+-++.+...|+..|+.  .      ..+.++.+++.+++|+|--.|..-.|-.+-.++  +.+-++.+.+.|+|+
T Consensus        35 ~~~~~~~A~a~~~~Ga~~i~~--~------~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~  104 (229)
T 3q58_A           35 PEIVAAMAQAAASAGAVAVRI--E------GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADI  104 (229)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEE--E------SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSE
T ss_pred             cchHHHHHHHHHHCCCcEEEE--C------CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCE
Confidence            556666666677789999876  1      235788888889999987766432221122222  222345567889999


Q ss_pred             EEEEccc--chhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          115 IDVELQV--AREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       115 vDIEl~~--~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                      |=+....  ..+.++++.. .+..+..++.+.|+      .++    .+++.+.|+|++-+
T Consensus       105 I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~t------~ee----a~~a~~~Gad~Ig~  155 (229)
T 3q58_A          105 IAFDASFRSRPVDIDSLLTRIRLHGLLAMADCST------VNE----GISCHQKGIEFIGT  155 (229)
T ss_dssp             EEEECCSSCCSSCHHHHHHHHHHTTCEEEEECSS------HHH----HHHHHHTTCSEEEC
T ss_pred             EEECccccCChHHHHHHHHHHHHCCCEEEEecCC------HHH----HHHHHhCCCCEEEe
Confidence            8776542  1222333321 23347888888873      223    45677899999953

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=95.68  E-value=0.011  Score=58.84  Aligned_cols=64  Identities=17%  Similarity=0.206  Sum_probs=48.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEEC--CHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANR--TYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nR--t~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      ++.|+|+|.+|.+++..|.+.|++|++++|  +.++++++.+. +..    .+..+ ...++|+||-++|..
T Consensus         2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~-g~~----~~~~~-~~~~aDvvi~~v~~~   67 (264)
T 1i36_A            2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV-GVT----ETSEE-DVYSCPVVISAVTPG   67 (264)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH-TCE----ECCHH-HHHTSSEEEECSCGG
T ss_pred             eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHC-CCc----CCHHH-HHhcCCEEEEECCCH
Confidence            688999999999999999999999999999  77777776653 322    22222 123579999988854

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.67  E-value=0.0022  Score=61.19  Aligned_cols=66  Identities=15%  Similarity=0.064  Sum_probs=45.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhc---ccccCCCCccEEEEcCCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      +++++|+|+ |++|++++..|.+.|.  +|+++.|+.++ .  .........++.+   +.+ ..  .|+|||+++..
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~--~~~~~~~~~D~~~~~~~~~-~~--~d~vi~~a~~~   76 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E--HPRLDNPVGPLAELLPQLD-GS--IDTAFCCLGTT   76 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C--CTTEECCBSCHHHHGGGCC-SC--CSEEEECCCCC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c--CCCceEEeccccCHHHHHH-hh--hcEEEECeeec
Confidence            578999996 8999999999999998  99999998654 0  0000001123333   333 22  89999999854

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.66  E-value=0.0021  Score=67.05  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=50.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCCcc--cchh-c---ccccCCCCccEEEEcC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGGHA--LSLA-D---LENFNPEDGMILANTT  449 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~~~--~~~~-~---l~~~~~~~~divInat  449 (616)
                      .+.+++|+|+|+ |.+|++++..|.+. |++|++++|+.++...+...-+...  .++. +   +.+ ...++|+||+++
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~-~~~~~d~Vih~A   99 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEY-HVKKCDVILPLV   99 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHH-HHHHCSEEEECB
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHH-HhccCCEEEEcC
Confidence            456789999997 89999999999998 8899999998766554432111111  2332 2   221 223589999988


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus       100 ~~~  102 (372)
T 3slg_A          100 AIA  102 (372)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	616
d1gqna_	252	c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase	7e-71
d1sfla_	236	c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase	3e-69
d1p77a2	101	c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE	2e-27
d1vi2a2	102	c.58.1.5 (A:5-106) Putative shikimate dehydrogenas	3e-27
d1nyta2	101	c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE	4e-26
d1nvta2	110	c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE	3e-25
d1npya2	102	c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like	1e-24
d1nyta1	170	c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE	3e-18
d1npya1	167	c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like	5e-18
d1p77a1	171	c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE	2e-17
d1vi2a1	182	c.2.1.7 (A:107-288) Putative shikimate dehydrogena	3e-17
d1nvta1	177	c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE	4e-15
d1gpja2	159	c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle	2e-07
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	4e-07
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-06
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-06
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-06
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-06
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	7e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	9e-06
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-05
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-05
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-05
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-05
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-05
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-05
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-05
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-05
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-04
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-04
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-04
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-04
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-04
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-04
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-04
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-04
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-04
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-04
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-04
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-04
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	7e-04
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	7e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	0.001
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.001
d2voua1	265	c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr	0.001
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	0.002
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.002
d1li4a1	163	c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas	0.002
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	0.003
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	0.003

>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} Length = 252

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Salmonella typhi [TaxId: 90370]

 Score =  227 bits (579), Expect = 7e-71
 Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 24  TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKE-----SPV 78
             I V +MG  ++ +  +      +  D++E R+D   +    +++ T  +        +
Sbjct: 16  PKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDI 75

Query: 79  PTLFTYRPIWEGGQYDGDENERVDVLRLAMELG-ADYIDVELQVA-REFNDSIRGKKPEK 136
           P LFT+R   EGG+        + + R A++ G  D ID+EL     +   ++       
Sbjct: 76  PLLFTFRSAKEGGEQTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHN 135

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH----- 191
             V++S+H++  TPS E++ + + ++QA GADI K A       DV  +   T+      
Sbjct: 136 VYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIPKIAVMPQSKHDVLTLLTATLEMQQHY 195

Query: 192 SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN 245
           +  P+I + M + G+ISR+    FG   TFG ++    SAPGQ  + DL  +  
Sbjct: 196 ADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQA--SAPGQIAVNDLRSVLM 247

>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 236

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

 Score =  222 bits (567), Expect = 3e-69
 Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 15/234 (6%)

Query: 26  ICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIK----ESPVPT 80
           +   I  + S+++ ++          D++E+R+D  +N    +  + + K    +     
Sbjct: 4   VVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKL 63

Query: 81  LFTYRPIWEGGQYDGDENERVDVL-RLAMELGADYIDVELQVAREFNDS---IRGKKPEK 136
           L TYR   +GG      +  ++++  LA   G D ID+E Q   +       I   +   
Sbjct: 64  LVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYN 123

Query: 137 CKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVH----S 192
            +VI+S HN++ TP +++L  +  ++Q    + VK A    +  DV  + Q         
Sbjct: 124 KEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTM 183

Query: 193 QVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYNF 246
              ++G+ M + GLISR     FGG LT+G +      APGQ  + DL      
Sbjct: 184 DCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEP--QAPGQIDVTDLKAQVTL 235

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

 Score =  103 bits (259), Expect = 2e-27
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
            ++ + G P+  SKSP++ N+          ++  L D     +    +      G + T
Sbjct: 2   DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNIT 61

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 352
            P KE A +  DE    AK   A N + +   DGKL+  NT
Sbjct: 62  SPFKERAYQLADEYSQRAKLAEACNTLKKLD-DGKLYADNT 101

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Length = 102

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSC 310
            ++ G++  P+ HS SP + N+A +  G    ++   VD        +   +    G   
Sbjct: 3   YELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGV 62

Query: 311 TIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 352
           ++P+K+ A +  DE+   AK +GA+N I+    DG L GYNT
Sbjct: 63  SMPNKQLACEYVDELTPAAKLVGAINTIVND--DGYLRGYNT 102

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 4e-26
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 254 KVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVD--DIAKFFQTYSSNDFAGFSCT 311
           + + + G P+ HSKSP ++ +  + +     +  +L    D       + S    G + T
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVT 61

Query: 312 IPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 352
           +P KE A    DE+   A   GAVN ++R + DG+L G NT
Sbjct: 62  VPFKEEAFARADELTERAALAGAVNTLMRLE-DGRLLGDNT 101

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 110

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 98.6 bits (245), Expect = 3e-25
 Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 249 MGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFA 306
           +   TKV G+IG PV HS SPI++N AFK  G N V+V   V  +++        +    
Sbjct: 7   INAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIV 66

Query: 307 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 352
           GF+ TIPHK   +K  DE+D  A+ IGAVN I     DGK  GYNT
Sbjct: 67  GFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIE--DGKAIGYNT 110

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Length = 102

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

 Score = 96.2 bits (239), Expect = 1e-24
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 249 MGPDTKVF-GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAG 307
           +  DT++   + G+P   +     +N  +  +G N ++      DI    +   +    G
Sbjct: 2   INKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRG 59

Query: 308 FSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNT 352
            + ++P KE  +   DE+   A++I +VN I+    +G L  YNT
Sbjct: 60  CAVSMPFKETCMPFLDEIHPSAQAIESVNTIVND--NGFLRAYNT 102

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

 Score = 80.4 bits (197), Expect = 3e-18
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 15/167 (8%)

Query: 353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 412
           D VG +S +E     RL+          G   ++IGAGGA + +     +    V I NR
Sbjct: 1   DGVGLLSDLE-----RLSFI------RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNR 49

Query: 413 TYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA 471
           T  RA ELA+         A  ++     +  ++ N TS G+    D   IP   +    
Sbjct: 50  TVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG--DIPAIPSSLIHPGI 107

Query: 472 LVFDAVYTPKITRLLREAEESGATIVS-GLEMFIGQAYEQYERFTGL 517
             +D  Y    T  L   E+ G+   + GL M + QA   +  + G+
Sbjct: 108 YCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGV 154

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

 Score = 79.6 bits (195), Expect = 5e-18
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 20/169 (11%)

Query: 353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIAN 411
           DY+  +  IE     + +++            +V G+GG  KA+    K  G  ++ I  
Sbjct: 1   DYIAIVKLIE-----KYHLN-------KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 48

Query: 412 RTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI--PKHALGH 469
           R     + LA   G        + +   +   IL N TSIGM+   +E  +  PK  + +
Sbjct: 49  RNVKTGQYLAALYGYA-----YINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDN 103

Query: 470 YALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
            ++ FD V  P  T  +R A+  G   +SG  + + QA EQ+E +T   
Sbjct: 104 ASVAFDVVAMPVETPFIRYAQARGKQTISGAAVIVLQAVEQFELYTHQR 152

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

 Score = 77.7 bits (190), Expect = 2e-17
 Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 16/168 (9%)

Query: 353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 412
           D +G ++ ++     RLN           +  +++GAGGA K +          +V+ANR
Sbjct: 1   DGIGLVTDLQ-----RLNWL------RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANR 49

Query: 413 TYDRARELAETVGGHALSLA-DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYA 471
           T+ + +ELAE    +    A  +++   +   ++ N TS G+        +    L   +
Sbjct: 50  TFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSG--GTASVDAEILKLGS 107

Query: 472 LVFDAVYT-PKITRLLREAEESGA-TIVSGLEMFIGQAYEQYERFTGL 517
             +D  Y     T  +   +  G   +  G  M + QA   +  + G+
Sbjct: 108 AFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGV 155

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

 Score = 77.7 bits (190), Expect = 3e-17
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)

Query: 353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIAN 411
           D  G I AI++               + GK  V++GAGGA  A+      +G   + + N
Sbjct: 1   DGTGHIRAIKE-----SGFD------IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFN 49

Query: 412 RTYDRAREL---AETVGGHALSLADLENFNPEDGM--------ILANTTSIGMQPKVDET 460
           R  +   +    A+ V  +   +  + +   +           IL N T +GM+P  +E+
Sbjct: 50  RRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENES 109

Query: 461 PIPKHALGHY-ALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
            +   +L H   LV + VY P +T+LL++A+++G   + G  M + Q  EQ+  +TG  
Sbjct: 110 LVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKD 168

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 71.6 bits (174), Expect = 4e-15
 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 19/173 (10%)

Query: 353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANR 412
           D +GA  A+E+               +  K  V+ GAGGA +A+A+   AK   ++IANR
Sbjct: 1   DGIGARMALEE-----EIGR------VKDKNIVIYGAGGAARAVAFE-LAKDNNIIIANR 48

Query: 413 TYDRARELAETVGGHALSLADLENFN------PEDGMILANTTSIGMQPKVDETPIPKHA 466
           T ++A  LA+ +          E          +   I+ N T IGM P +D  PI K  
Sbjct: 49  TVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAE 108

Query: 467 L-GHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLP 518
                 +V D +Y P  T LL+EA++  A  ++GL M I Q    ++ +TG+ 
Sbjct: 109 KLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVE 161

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 379 LAGKLFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENF 437
           L  K  +V+GAG  GK +A     +G   V++ANRTY+RA ELA  +GG A+   +L + 
Sbjct: 22  LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDH 81

Query: 438 NPE-DGMILANTTSIGMQPKVDETPIPKHALGHYALVF-DAVYTPKITRLLREAEESGAT 495
               D ++ A      +    D     +       ++  D      +   +   E+    
Sbjct: 82  LARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVR 141

Query: 496 IVSGLEMFIGQAYEQYER 513
            +  L +   +  E+  +
Sbjct: 142 TIDDLRVIARENLERRRK 159

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 48.5 bits (114), Expect = 4e-07
 Identities = 22/110 (20%), Positives = 41/110 (37%)

Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNP 439
           A K  +++G+G   +         G +V +A RT + A++L+  V        D+ +   
Sbjct: 1   ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAA 60

Query: 440 EDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA 489
            D  +  +   I + P      + K A+     V    Y       L +A
Sbjct: 61  LDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQA 110

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 48.3 bits (114), Expect = 1e-06
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L GK  ++ G+  G G+A A     +GARV IA+   + AR  A  +G  A ++A
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIA 57

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL 431
           L  K  ++ GA  G G+A       +GAR+V  +      RE AE VG H + +
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVM 56

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
            AGK+ VV G G G G  +       GARVVI ++     R L + + G    L D+  
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQ 62

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 4e-06
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
           LAG+  +V GAG G G+       A GARVV  +RT      L     G      DL ++
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW 64

Query: 438 N 438
            
Sbjct: 65  E 65

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 45.4 bits (107), Expect = 7e-06
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           S  L GK+ +V G   G G +      A+GA+VV  +   +  + +A  +   A  + 
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH 58

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.0 bits (105), Expect = 7e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
           ++ ++ G G  GK LA      G  +V+ +R  ++A   A      A
Sbjct: 2   RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA 48

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 45.1 bits (106), Expect = 9e-06
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-ADLEN 436
           L+GK  +V GA  G G+A       +GA +V  +R      E    +   A+++ AD+ +
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 62

Query: 437 FN 438
             
Sbjct: 63  PK 64

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L+GK  ++ G   G G   A  A A GARVV+A+   +     A  +G  A    
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQH 57

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
           L GK+ +V G   G G  +      +GA+V  ++      ++LA  +G  ++ + 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVR 58

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENF 437
            +G   +V GAG G G+       A GA+VV   RT      LA+   G      DL ++
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW 62

Query: 438 N 438
           +
Sbjct: 63  D 63

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-ADLEN 436
           L G+  ++ G   G G+AL     A+GA+V + +++ +R  EL    G + L +  D+ +
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 43.6 bits (102), Expect = 3e-05
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA 432
             GK+ +V GA  G G+A+A    A+GA+V+    + + A+ +++ +G +   L 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLM 56

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-AD 433
           L GK  ++ GAG G GK +A      GA VV+++   D A  + + +   GG A +   D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 434 LEN 436
           + +
Sbjct: 69  ITS 71

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.9 bits (101), Expect = 4e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
            AGK  +V G   G G+A+A     +GA V + +      +E+AE +GG      DLE+
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAIGGAFFQ-VDLED 59

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
           + G++ ++ GAG G G+  AY      +++V+ +       E A    G 
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL 54

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
            +GK  ++ G+  G G++ A     +GA+V I  R  DR  E  + +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQI 48

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 9e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
           L GK+ ++  A  G G+A A     +GA+V+  +    + +EL +  G   
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT 54

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 9e-05
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
           + G + V+ G   G G A A     +GA  V+ +         A+ +G +
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
           S+ L GK+ ++ G   G G A+A     +GA+V+I  R  D   + A++VG
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG 51

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDR----ARELAETVGGHALSL-A 432
           L G++ +V G   G G  +A G    G  VV+A+R  +     A++L E  G   ++   
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 433 DLENFN 438
           D+ N+ 
Sbjct: 63  DVSNYE 68

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGG 426
           L G++ +V G   G GKA+       G+ VVIA+R  +R +  A+ +  
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA 58

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH 427
           L  K+ ++ G   G G+  A      GA+VVIA+   D  +++   +G  
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP 53

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-AD 433
             GK+ +V GAG   G A A     +G  + + +   +   +   +V   G  A S   D
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 434 LENFN 438
           + +  
Sbjct: 63  VTSEE 67

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYG---AKAKGARVVIANRTYDRARELAETVGG 426
           +  L   + V+ GA  G G+ALA       + G+ ++++ R+    R+L E +G 
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA 55

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 422
             GK+  + G G G GK +     + GA+ VIA+R  D  +  AE
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE 67

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 22/139 (15%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHALSL-A 432
              K  +V G   G G A      A GA V +  R+   A E+ E V    G    +   
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 433 DL--------------ENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY 478
           D+               +  P     L     + +     E      A  +   VF    
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPIS--GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 479 TPKITRLLREAEESGATIV 497
           T +    L   ++   +IV
Sbjct: 125 TCRAVAKLWLQKQQKGSIV 143

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
            A K+ ++ G+  G G+A A     +GA+V I  R  +R  E  + +
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQI 49

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
            + K  ++ G+  G G+  A     +GA V I  R+ +R  E  + +    +S
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS 55

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL 429
           L G   +V G   G G A+       GARV   +R      E  E      L
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL 55

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 422
              +L +V GA  G G A+A     +G +VV   RT     ELA 
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA 52

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAE 422
           L GK  +V GA  G G+ +AY     GA VV+  R+ +  +++  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS 56

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSL-ADLE 435
           L  KL V+ G   G G+A+A     +GA + IA+      A      +G   L++  D+ 
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62

Query: 436 N 436
            
Sbjct: 63  Q 63

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.9 bits (92), Expect = 5e-04
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
           +GK+ V  G G  G A+    K  G  V+  + + +   +    V G+       +
Sbjct: 2   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQ 57

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
              ++ ++ G G G G+A A    A+GA++ + + + +        V   A
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 52

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 10/51 (19%), Positives = 15/51 (29%), Gaps = 1/51 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA 428
           L G   +V G   G G  +     + GA V   +R      +         
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG 56

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 376 SSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
           S  LAGK+ +  GAG G G+ +A     +GA VV+    Y  + + AE V
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVV---NYGSSSKAAEEV 47

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 11/53 (20%), Positives = 14/53 (26%), Gaps = 1/53 (1%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALS 430
           L  K  +V G   G G A+       GA +    R      E           
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 58

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.3 bits (91), Expect = 7e-04
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLEN 436
           +  K  +V+ A  G G+A+A     +GA V I  R  +  +       GH   + DL  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----GHRYVVCDLRK 55

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 39.4 bits (91), Expect = 7e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 382 KLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-ADLEN 436
           K+ +V GAG G GKA+A      G  V IA+     A+ +A  +   GGHA+++  D+ +
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 39.4 bits (90), Expect = 7e-04
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 379 LAGKLFVVIGAGGA---GKALAYGAKAKGARVVIANRTYDR-ARELAETVGGHALSL 431
           L GK  +V G          +A  A+ +GA++V+      R  + + + +   A  L
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL 60

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE 422
           L  K  + + A GG G   +     +  +  +     +    LAE
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE 47

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 373 GGVSSALAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV 424
           G  S++L GK+ +V GAG G G+ +A     +G +V++    Y  + E AE V
Sbjct: 10  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIV---NYANSTESAEEV 59

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSLA 432
              K+ +V GAG G G+ +A       + V+  +RT      + + +   G  +   A
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.6 bits (89), Expect = 0.001
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLE 435
              +  +V G   G G A+A    A G +V +      R     + + G  + + D +
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVT----HRGSGAPKGLFGVEVDVTDSD 58

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 15/114 (13%), Positives = 32/114 (28%)

Query: 385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMI 444
            V+G   +G   A   +  G  V +  R+          +      +  L     E   I
Sbjct: 8   AVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSI 67

Query: 445 LANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS 498
              ++S+     +    +           +D++Y         E   +   +V 
Sbjct: 68  SVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVG 121

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 38.2 bits (88), Expect = 0.002
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)

Query: 379 LAGKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTY-DRARELAETV---GGHALSLA 432
           L GK+ V+ G+  G GK++A     + A+VV+  R+  D A  + E +   GG A+++ 
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 38.2 bits (88), Expect = 0.002
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%)

Query: 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETV---GGHALSL-ADLE 435
            ++ +V GA  G G  +A     +G RV +  R  +  R   + +   G  A     D+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 436 NFN 438
           +  
Sbjct: 62  SVP 64

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 363 DGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRA 417
           DG++   +V       +AGK+ VV G G  GK  A   +  GARV+I       A
Sbjct: 12  DGIKRATDVM------IAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINA 60

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 381 GKLFVVIGAG-GAGKALAYGAKAKGARVVIANRTYDRARELAETVG 425
           GK+ +V GA  G G+A A     KGA+V + +   +   +    + 
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH 48

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 0.003
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 3/47 (6%)

Query: 379 LAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAE 422
           L+GK  +V G          +A     +GA +    +       + E
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	616
d1gqna_	252	Type I 3-dehydroquinate dehydratase {Salmonella ty	100.0
d1sfla_	236	Type I 3-dehydroquinate dehydratase {Staphylococcu	100.0
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	100.0
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	100.0
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	99.98
d1p77a2	101	Shikimate 5-dehydrogenase AroE {Haemophilus influe	99.97
d1vi2a2	102	Putative shikimate dehydrogenase YdiB {Escherichia	99.97
d1nyta2	101	Shikimate 5-dehydrogenase AroE {Escherichia coli [	99.97
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	99.97
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	99.97
d1nvta2	110	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	99.97
d1npya2	102	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	99.96
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	99.28
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.21
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.63
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.42
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.4
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.38
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.37
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.33
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.33
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.32
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.29
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.29
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.28
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.27
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.26
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.25
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.25
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.24
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.23
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.21
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.18
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.16
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.16
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.16
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.15
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.14
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.14
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.14
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.13
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.13
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.13
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.13
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.12
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.07
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.04
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.02
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.99
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.98
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.93
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.92
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.88
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.88
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.86
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.84
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.79
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.75
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.73
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.72
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.72
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.66
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.65
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.65
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.64
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.6
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	97.56
d1kaga_	169	Shikimate kinase (AroK) {Escherichia coli [TaxId:	97.54
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.53
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.52
d1viaa_	161	Shikimate kinase (AroK) {Campylobacter jejuni [Tax	97.49
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.48
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.42
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.39
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.39
d2iyva1	165	Shikimate kinase (AroK) {Mycobacterium tuberculosi	97.36
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.36
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.34
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.33
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.32
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.3
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.26
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.24
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.21
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.2
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.18
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.17
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.15
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.14
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.12
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.12
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.09
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.08
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.08
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.07
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.07
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.05
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.03
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.01
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	96.95
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.94
d1e6ca_	170	Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax	96.92
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.92
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.91
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.91
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.89
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.88
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.88
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.87
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	96.83
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.81
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.81
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.77
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.74
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	96.74
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.73
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.72
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.72
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.69
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.65
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.65
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.63
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.61
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.59
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.59
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.59
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.57
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.53
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.53
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.5
d1m8pa3	183	ATP sulfurylase C-terminal domain {Fungus (Penicil	96.49
d1rkba_	173	Adenylate kinase {Human (Homo sapiens), isoenzyme	96.49
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.48
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.46
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.45
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.43
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.41
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.4
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.39
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.34
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.32
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.32
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.31
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.3
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.3
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.3
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.29
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.29
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.26
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.23
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	96.22
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.13
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.08
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.07
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.06
d1x6va3	195	Adenosine-5'phosphosulfate kinase (APS kinase) {Hu	95.92
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.92
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.9
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.87
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.85
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.83
d2ak3a1	189	Adenylate kinase {Cow (Bos taurus), mitochondrial	95.83
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.8
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.76
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.74
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.67
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	95.64
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.64
d1zina1	182	Adenylate kinase {Bacillus stearothermophilus [Tax	95.64
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.63
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.59
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.56
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.55
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.55
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.54
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.5
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.42
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	95.41
d1zp6a1	176	Hypothetical protein Atu3015 {Agrobacterium tumefa	95.38
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	95.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.35
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.31
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.25
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	95.24
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.19
d1y63a_	174	Probable kinase LmjF30.1890 {Leishmania major [Tax	95.16
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.16
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.14
d1s3ga1	182	Adenylate kinase {Bacillus globisporus [TaxId: 145	95.11
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.06
d2cdna1	181	Adenylate kinase {Mycobacterium tuberculosis [TaxI	94.95
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.92
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	94.9
d1akya1	180	Adenylate kinase {Baker's yeast (Saccharomyces cer	94.83
d1lw7a2	192	Transcriptional regulator NadR, ribosylnicotinamid	94.77
d2bdta1	176	Hypothetical protein BH3686 {Bacillus halodurans [	94.76
d1zaka1	189	Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}	94.76
d1knqa_	171	Gluconate kinase {Escherichia coli [TaxId: 562]}	94.68
d1e4va1	179	Adenylate kinase {Escherichia coli [TaxId: 562]}	94.59
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.5
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.46
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.44
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.39
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.33
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.31
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.26
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	94.18
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.96
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.9
d1ak2a1	190	Adenylate kinase {Cow (Bos taurus), mitochondrial	93.89
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.86
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.78
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.73
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.71
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.53
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.5
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	93.39
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.36
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.34
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.28
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.26
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.24
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.17
d1xi3a_	206	Thiamin phosphate synthase {Archaeon (Pyrococcus f	93.08
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.07
d3adka_	194	Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}	93.07
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.06
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.03
d1qhxa_	178	Chloramphenicol phosphotransferase {Streptomyces v	92.8
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.74
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.69
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.66
d1gvnb_	273	Plasmid maintenance system epsilon/zeta, toxin zet	92.66
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.57
d1ukza_	196	Uridylate kinase {Baker's yeast (Saccharomyces cer	92.46
d1twda_	247	Copper homeostasis protein CutC {Shigella flexneri	92.45
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.38
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.38
d1qf9a_	194	UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4	92.27
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	92.23
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.17
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.13
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	92.11
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.03
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.02
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.94
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.92
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.81
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.71
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	91.61
d1ly1a_	152	Polynucleotide kinase, kinase domain {Bacteriophag	91.58
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	91.57
d1sxja2	253	Replication factor C1 {Baker's yeast (Saccharomyce	91.56
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.45
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	91.42
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.38
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	91.29
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	91.25
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.22
d1khta_	190	Adenylate kinase {Archaeon Methanococcus voltae [T	91.22
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.05
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.03
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.0
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.98
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	90.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.92
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.79
d1yj5a2	172	5' polynucleotide kinase-3' phosphatase, C-termina	90.78
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	90.77
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.76
d1ckea_	225	CMP kinase {Escherichia coli [TaxId: 562]}	90.74
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	90.71
d1ub3a_	211	Deoxyribose-phosphate aldolase DeoC {Thermus therm	90.68
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.56
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.54
d1bifa1	213	6-phosphofructo-2-kinase/fructose-2,6-bisphosphata	90.53
d1yx1a1	250	Hypothetical protein PA2260 {Pseudomonas aeruginos	90.51
d1nksa_	194	Adenylate kinase {Archaeon Sulfolobus acidocaldari	90.47
d1ixsb2	239	Holliday junction helicase RuvB {Thermus thermophi	90.42
d1m7ga_	208	Adenosine-5'phosphosulfate kinase (APS kinase) {Fu	90.36
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	90.33
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.3
d1teva_	194	UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]	90.29
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.29
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.18
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	90.14
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.07
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	89.99
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	89.78
d1ojxa_	251	Archaeal fructose 1,6-bisphosphate aldolase {Archa	89.58
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.03
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.02
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	88.84
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.81
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.77
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.67
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.6
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	88.37
d2q02a1	271	Putative cytoplasmic protein STM4435 {Salmonella t	88.19
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.05
d1ofha_	309	HslU {Haemophilus influenzae [TaxId: 727]}	87.95
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.93
d1wa3a1	202	KDPG aldolase {Thermotoga maritima [TaxId: 2336]}	87.79
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.72
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.63
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.62
d1h65a_	257	Chloroplast protein translocon GTPase Toc34 {Garde	87.57
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	87.53
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.44
d1o0ya_	251	Deoxyribose-phosphate aldolase DeoC {Thermotoga ma	87.38
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.08
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	87.03
d1fnna2	276	CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T	86.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	86.87
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	86.75
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	86.74
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.66
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.99
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.94
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.93
d1q3ta_	223	CMP kinase {Streptococcus pneumoniae [TaxId: 1313]	85.9
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.82
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.67
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	85.62
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.56
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	85.46
d1g41a_	443	HslU {Haemophilus influenzae [TaxId: 727]}	85.46
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	85.45
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	85.42
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	85.26
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	85.26
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.18
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	85.17
d1d2na_	246	Hexamerization domain of N-ethylmalemide-sensitive	84.8
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	84.72
d1sxje2	252	Replication factor C5 {Baker's yeast (Saccharomyce	84.47
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	84.32
d1ad1a_	264	Dihydropteroate synthetase {Staphylococcus aureus	83.89
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.61
d1in4a2	238	Holliday junction helicase RuvB {Thermotoga mariti	83.5
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	83.41
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	83.4
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	83.38
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	83.38
d1ajza_	282	Dihydropteroate synthetase {Escherichia coli [TaxI	82.98
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.87
d1ad1a_	264	Dihydropteroate synthetase {Staphylococcus aureus	82.56
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	82.21
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	82.2
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	82.01
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	81.8
d1lv7a_	256	AAA domain of cell division protein FtsH {Escheric	81.7
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	81.69
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.4
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	80.92
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	80.81
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	80.62
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	80.47
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	80.39

>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=9.6e-54  Score=432.51  Aligned_cols=227  Identities=27%  Similarity=0.438  Sum_probs=204.6

Q ss_pred             cCCCCCeEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhH----HHHHhhhC-CCcEEEEeccCCCCCC
Q 007151           18 GMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPREN----IKTLIKES-PVPTLFTYRPIWEGGQ   92 (616)
Q Consensus        18 ~~~~~~~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~----l~~l~~~~-~~PiI~T~Rt~~eGG~   92 (616)
                      .+-..+|+|||||++++.++++++++++.+.|||+||||+|+|.+..+.+.    ++.+++.. ++|+|||+|+++|||.
T Consensus        10 ~~g~g~pkIcv~l~~~~~~~~~~~~~~~~~~~aD~vE~RlD~l~~~~~~~~l~~~~~~lr~~~~~~PiI~T~R~~~eGG~   89 (252)
T d1gqna_          10 IIGEGMPKIIVSLMGRDINSVKAEALAYREATFDILEWRVDHFMDIASTQSVLTAARVIRDAMPDIPLLFTFRSAKEGGE   89 (252)
T ss_dssp             EETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCSCTTCHHHHHHHHHHHHHHCTTSCEEEECCBGGGTCS
T ss_pred             EecCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEEEccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCC
Confidence            344678999999999999999999999888999999999999987654333    44555544 6999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHhC-CcEEEEEcccchhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEE
Q 007151           93 YDGDENERVDVLRLAMELG-ADYIDVELQVAREFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIV  170 (616)
Q Consensus        93 ~~~~~e~~~~ll~~~~~~g-~dyvDIEl~~~~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIv  170 (616)
                      |++++++|+++|+.++++| |||||||++.+++.++++.. .+..++++|+|||||++||+.+++.+++++|.++||||+
T Consensus        90 ~~~~~~~~~~ll~~~~~~~~~d~iDiEl~~~~~~~~~li~~a~~~~~~vI~S~Hdf~~TP~~~~l~~~~~~m~~~gaDiv  169 (252)
T d1gqna_          90 QTITTQHYLTLNRAAIDSGLVDMIDLELFTGDADVKATVDYAHAHNVYVVMSNHDFHQTPSAEEMVSRLRKMQALGADIP  169 (252)
T ss_dssp             BCCCHHHHHHHHHHHHHHSCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHHHHHHHHHcCCCceEeccccccHHHHHHHHHHhhcCCCeEEEEecCCCCCCCHHHHHHHHHHHHHhCCCeE
Confidence            9999999999999999999 89999999999887777664 356899999999999999999999999999999999999


Q ss_pred             EEEeecCCHhHHHHHHHHhhc-----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhh
Q 007151          171 KFATTALDITDVARVFQITVH-----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  245 (616)
Q Consensus       171 Kia~~~~s~~D~~~ll~~~~~-----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~  245 (616)
                      |+|+||++.+|++++++++.+     .++|+|+|+||+.|++||++++.|||++||++++++  +||||+++++|+++++
T Consensus       170 Kia~~a~~~~D~~~ll~~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~~~~GS~~tya~~~~~--sAPGQ~~~~~l~~~l~  247 (252)
T d1gqna_         170 KIAVMPQSKHDVLTLLTATLEMQQHYADRPVITMSMAKEGVISRLAGEVFGSAATFGAVKQA--SAPGQIAVNDLRSVLM  247 (252)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHHHHHTCSSCCEEEECTTTTHHHHHCHHHHTCCEEECBSSSC--CSTTCCBHHHHHHHHH
T ss_pred             EEEecCCCHHHHHHHHHHHHHHHHhCCCCCEEEEecCCcchhHHHHHHHhCCceEeccCCCC--CCCCCCCHHHHHHHHH
Confidence            999999999999999988643     378999999999999999999999999999999864  9999999999999886


Q ss_pred             c
Q 007151          246 F  246 (616)
Q Consensus       246 f  246 (616)
                      .
T Consensus       248 ~  248 (252)
T d1gqna_         248 I  248 (252)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Type I 3-dehydroquinate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.2e-48  Score=391.50  Aligned_cols=218  Identities=25%  Similarity=0.411  Sum_probs=183.9

Q ss_pred             EEEEeecCC-CHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHH----HHhhh-CCCcEEEEeccCCCCCCCCCCHH
Q 007151           25 LICVPIMGE-SVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIK----TLIKE-SPVPTLFTYRPIWEGGQYDGDEN   98 (616)
Q Consensus        25 ~Icv~l~~~-~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~----~l~~~-~~~PiI~T~Rt~~eGG~~~~~~e   98 (616)
                      +||+|++.. +.++.+.+..+....++|+||||+|+|.+.+.. ++.    .+++. .++|+|||+|+++|||.++++++
T Consensus         3 ~~~~~~~~~~~~e~~~~~~~~~~~~~~D~vElRlD~l~~~~~~-~v~~~~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~   81 (236)
T d1sfla_           3 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVTVD-QVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTND   81 (236)
T ss_dssp             EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCCHH-HHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHH
T ss_pred             cEEEecCCchhHHHHHHHHHHhcCcCCCEEEEEeccccCCCHH-HHHHHHHHHHhcCCCCcEEEEEeCHHHCCCCCCCHH
Confidence            688999999 667765544444556899999999999987653 333    33332 37899999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCcEEEEEcccchhhhH--Hhh-ccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEe
Q 007151           99 ERVDVLRLAMEL-GADYIDVELQVAREFND--SIR-GKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFAT  174 (616)
Q Consensus        99 ~~~~ll~~~~~~-g~dyvDIEl~~~~~~~~--~l~-~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~  174 (616)
                      +|.+++..+++. ++||||||+..+.+..+  ++. ..++.++++|+|||||++||+.+++.+++++|.+.||||+|+|+
T Consensus        82 ~~~~ll~~~~~~~~~d~iDiE~~~~~~~~~~~~~~~~~~~~~~~vI~S~H~f~~TP~~~el~~~~~~~~~~gaDivKia~  161 (236)
T d1sfla_          82 SYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAV  161 (236)
T ss_dssp             HHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             HHHHHHHHHHHhcCCchhhhhhcchhhHHHHHHHHHHhhcCCCEEEEEEcCCCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence            999999988876 59999999987654322  222 23567899999999999999999999999999999999999999


Q ss_pred             ecCCHhHHHHHHHHhhc----CCCCEEEEecCcchhhHhhhccccCCcccccccccccCCCCCCCCHHhhhhhhh
Q 007151          175 TALDITDVARVFQITVH----SQVPIIGLVMGERGLISRILCAKFGGFLTFGTLENGIVSAPGQPTIKDLLDLYN  245 (616)
Q Consensus       175 ~~~s~~D~~~ll~~~~~----~~~plI~i~MG~~G~~SRil~~~~GS~lTf~~l~~~~~sAPGQl~i~~l~~~~~  245 (616)
                      ||++.+|++++++++.+    .+.|+|+|+||+.|++||++++.|||++||++++++  +||||+++++|++++.
T Consensus       162 ~~~~~~D~~~ll~~~~~~~~~~~~pii~~~MG~~G~~sRi~~~~~GS~~tya~~~~~--sAPGQ~~~~~lr~~l~  234 (236)
T d1sfla_         162 MPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEP--QAPGQIDVTDLKAQVT  234 (236)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGGGHHHHHTGGGGTBCEEEEBSSCC--SSTTCCBHHHHHHHHT
T ss_pred             ecCCHHHHHHHHHHHHHHhhccCCCEEEEecCCcchHHHHHHHHhCCceEEccCCCC--CCCCCcCHHHHHHHHh
Confidence            99999999999998653    378999999999999999999999999999999865  9999999999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-34  Score=272.48  Aligned_cols=160  Identities=29%  Similarity=0.384  Sum_probs=136.8

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc----c
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH----A  428 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~----~  428 (616)
                      ||.||+++|++.           +..++||+|+|+||||+|||++++|.+.|++|+|+||+.++++++++.+...    .
T Consensus         1 Dg~Gf~~~l~~~-----------~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~   69 (170)
T d1nyta1           1 DGVGLLSDLERL-----------SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA   69 (170)
T ss_dssp             HHHHHHHHHHHH-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE
T ss_pred             CHhHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc
Confidence            899999999763           2567899999999999999999999999999999999999999999988642    1


Q ss_pred             cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHcCCe-EEccHHHHHHHH
Q 007151          429 LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGAT-IVSGLEMFIGQA  507 (616)
Q Consensus       429 ~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~-~i~Gl~MLv~Qa  507 (616)
                      .++++.   ....+|+||||||+||.+..  .+++.+.+.+..+|+|++|+|.+|+|+++|+++|+. +++|++||++||
T Consensus        70 ~~~~~~---~~~~~dliIN~Tp~G~~~~~--~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~i~Gl~MLi~Qa  144 (170)
T d1nyta1          70 LSMDEL---EGHEFDLIINATSSGISGDI--PAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQA  144 (170)
T ss_dssp             CCSGGG---TTCCCSEEEECCSCGGGTCC--CCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEEECTHHHHHHHH
T ss_pred             cccccc---cccccceeecccccCcccCC--CCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcccCCHHHHHHHH
Confidence            233332   23568999999999998753  355666788889999999999999999999999985 789999999999


Q ss_pred             HHHHHHHcCCCCCCchHHHHHHH
Q 007151          508 YEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       508 ~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +.||++|||+++|.+.+  +++|
T Consensus       145 ~~~f~lwtG~~~~~~~~--~~~l  165 (170)
T d1nyta1         145 AHAFLLWHGVLPDVEPV--IKQL  165 (170)
T ss_dssp             HHHHHHHHSSCCCHHHH--HHHH
T ss_pred             HHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999887665  5665

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=3.6e-34  Score=271.55  Aligned_cols=160  Identities=28%  Similarity=0.357  Sum_probs=137.2

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccch
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSL  431 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~  431 (616)
                      ||.||.++|++.           +.+ ++|+|+|+|+||+|||++++|.+.|+ +|+|+||+.++++.+++.++....+.
T Consensus         1 D~~G~~~~l~~~-----------~~~-~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~   68 (167)
T d1npya1           1 DYIAIVKLIEKY-----------HLN-KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINS   68 (167)
T ss_dssp             HHHHHHHHHHHT-----------TCC-TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESC
T ss_pred             ChHHHHHHHHHc-----------CCC-CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhc
Confidence            899999998763           123 68899999999999999999999998 89999999999999999886543221


Q ss_pred             hcccccCCCCccEEEEcCCCCCCCCCCCC--ccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHH
Q 007151          432 ADLENFNPEDGMILANTTSIGMQPKVDET--PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE  509 (616)
Q Consensus       432 ~~l~~~~~~~~divInat~~gm~p~~~~~--pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~  509 (616)
                        .   ...++|+||||||+||.|..+..  +++...+.+..+|+|++|+|.+|+|+++|+++||++++|++||++||+.
T Consensus        69 --~---~~~~~DliINaTpiGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~i~Gl~Mli~Qa~~  143 (167)
T d1npya1          69 --L---ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFIRYAQARGKQTISGAAVIVLQAVE  143 (167)
T ss_dssp             --C---TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHHHHHHH
T ss_pred             --c---cccchhhheeccccCCccccccccccccHhhcCCcceEEEEeeccCCCHHHHHHHHCCCeEEECHHHHHHHHHH
Confidence              1   23468999999999998875544  3455567788999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCchHHHHHHHH
Q 007151          510 QYERFTGLPGKMNAPHLYKFFV  531 (616)
Q Consensus       510 qf~lwtG~~~p~~~~~l~~~l~  531 (616)
                      ||++|||.++|.+.+  +++.+
T Consensus       144 ~f~lwtg~~~~~~~~--~~aa~  163 (167)
T d1npya1         144 QFELYTHQRPSDELI--AEAAA  163 (167)
T ss_dssp             HHHHHHSCCCCHHHH--HHHHH
T ss_pred             HHHHHhCCCCCHHHH--HHHHH
Confidence            999999999887776  67764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.98  E-value=1.6e-32  Score=262.24  Aligned_cols=163  Identities=30%  Similarity=0.484  Sum_probs=138.2

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-----
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----  427 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-----  427 (616)
                      ||.||+.+|++..           .+++||+|+|+|+||+|||++++|.+.| +|+|+||+.++++++++.+...     
T Consensus         1 D~~G~~~~l~~~~-----------~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~   68 (177)
T d1nvta1           1 DGIGARMALEEEI-----------GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF   68 (177)
T ss_dssp             HHHHHHHHHHHHH-----------CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH
T ss_pred             CHHHHHHHHHHhC-----------CCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhh
Confidence            8999999998752           4689999999999999999999997766 9999999999999999887531     


Q ss_pred             --ccchhcccccCCCCccEEEEcCCCCCCCCCCCC-ccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHH
Q 007151          428 --ALSLADLENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       428 --~~~~~~l~~~~~~~~divInat~~gm~p~~~~~-pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                        .+++.++.. ....+|++|||||+||.|..+.. +++...+.+..+++|++|+|.+|+|++.|+++|+++++|++||+
T Consensus        69 ~~~~~~~~~~~-~~~~~dliIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~T~l~~~a~~~G~~~i~Gl~MLv  147 (177)
T d1nvta1          69 GEEVKFSGLDV-DLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLI  147 (177)
T ss_dssp             HHHEEEECTTC-CCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSCHHHHHHHTTTCEEECTHHHHH
T ss_pred             hhhhhhhhhhh-ccchhhhhccCCcccccccccccchhhhhccCcccceeeecCCcHhHHHHHHHHHCCCcccCCHHHHH
Confidence              123444444 45678999999999998764433 35556778889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          505 GQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       505 ~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      +||+.||++|||.++|.+.+  ++.+
T Consensus       148 ~Qa~~qf~lwtg~~~~~~~~--r~~l  171 (177)
T d1nvta1         148 YQGAVAFKIWTGVEPNIEVM--KNAI  171 (177)
T ss_dssp             HHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHH--HHHH
Confidence            99999999999999887766  6765

>d1p77a2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=99.97  E-value=7.1e-33  Score=240.97  Aligned_cols=99  Identities=27%  Similarity=0.394  Sum_probs=94.7

Q ss_pred             ceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHh
Q 007151          253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  330 (616)
Q Consensus       253 t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~  330 (616)
                      +++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++++++.+++.+|.|+|||||||+++++++|++|+.|+
T Consensus         1 M~~~~viG~PI~hS~SP~ihn~~~~~~gi~~~y~~~~v~~~~~~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a~   80 (101)
T d1p77a2           1 MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAK   80 (101)
T ss_dssp             CEEEEEEESSCTTCCHHHHHHHHHHHTTCCEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHH
T ss_pred             CCEEEEeCCCcccccCHHHHHHHHHHcCCCcccccccCCHHHHHHHHHHHHhccccceeeccHHHHHHHHHhccCCHHHH
Confidence            47899999999999999999999999999999999988  5899999999889999999999999999999999999999


Q ss_pred             hhcceeEEEEeccCCeEEEEec
Q 007151          331 SIGAVNCIIRRQSDGKLFGYNT  352 (616)
Q Consensus       331 ~iGAVNTIv~~~~dg~l~G~NT  352 (616)
                      .+||||||++++ ||+|+||||
T Consensus        81 ~igAvNti~~~~-~g~l~G~NT  101 (101)
T d1p77a2          81 LAEACNTLKKLD-DGKLYADNT  101 (101)
T ss_dssp             HHTCCSEEEECT-TSCEEEECC
T ss_pred             HcCeeEEEEECC-CCEEEEecC
Confidence            999999999873 899999999

>d1vi2a2 c.58.1.5 (A:5-106) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=6.5e-33  Score=241.54  Aligned_cols=99  Identities=30%  Similarity=0.531  Sum_probs=95.8

Q ss_pred             CceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhH
Q 007151          252 DTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVA  329 (616)
Q Consensus       252 ~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A  329 (616)
                      ++++|||||+||+||+||.|||.+|+++|+|+.|.++++  ++++++++.+++.+|.|+|||||||+++++++|++|+.|
T Consensus         2 k~~l~GliG~Pi~hS~SP~ihn~~f~~~gi~~~Y~~~~v~~~~l~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a   81 (102)
T d1vi2a2           2 KYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAA   81 (102)
T ss_dssp             CCEEEEEEESCCTTCSHHHHHHHHHHHTTCSEEEEEEECCTTTHHHHHHHHHHTTCCEEEECTTSTTGGGGGCSEECHHH
T ss_pred             CeEEEEEEcCCcccccCHHHHHHHHHHcCCCcEEeeEeeCchHHHHHHHHhhhhccchhhhhhHHHHHHHHhcccCCHHH
Confidence            578999999999999999999999999999999999998  589999999998999999999999999999999999999


Q ss_pred             hhhcceeEEEEeccCCeEEEEec
Q 007151          330 KSIGAVNCIIRRQSDGKLFGYNT  352 (616)
Q Consensus       330 ~~iGAVNTIv~~~~dg~l~G~NT  352 (616)
                      +.+||||||+++  +|+|+||||
T Consensus        82 ~~igAvNti~~~--~g~l~G~NT  102 (102)
T d1vi2a2          82 KLVGAINTIVND--DGYLRGYNT  102 (102)
T ss_dssp             HHHTCCSEEEEE--TTEEEEECH
T ss_pred             HhhCcEEEEEEE--CCEEEEeCC
Confidence            999999999987  899999998

>d1nyta2 c.58.1.5 (A:1-101) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=8.3e-33  Score=240.50  Aligned_cols=99  Identities=30%  Similarity=0.526  Sum_probs=94.7

Q ss_pred             ceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhccccHhHh
Q 007151          253 TKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAK  330 (616)
Q Consensus       253 t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls~~A~  330 (616)
                      ++.|||||+||+||+||.|||.+|+++|+|+.|.++++  +++.++++.+++.+|.|+|||||||+++++++|++|+.|+
T Consensus         1 M~~~~liG~pi~hS~SP~ihn~~~~~~gi~~~y~~~~v~~~~~~~~~~~l~~~~~~G~nVT~P~K~~~~~~~d~~~~~a~   80 (101)
T d1nyta2           1 METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAA   80 (101)
T ss_dssp             CCSEEEEESSCTTCSHHHHHHHHHHHHTCCCCEEEEECCTTCHHHHHHHHHHTTCCEEEECTTCHHHHHHHCSEECHHHH
T ss_pred             CCEEEEeCCCcccccCHHHHHHHHHHcCCcchhhhhcCChHhHHHHHHHhhhccchhheeehHHHHHHHHHhccCChHHH
Confidence            46799999999999999999999999999999999988  6899999999999999999999999999999999999999


Q ss_pred             hhcceeEEEEeccCCeEEEEec
Q 007151          331 SIGAVNCIIRRQSDGKLFGYNT  352 (616)
Q Consensus       331 ~iGAVNTIv~~~~dg~l~G~NT  352 (616)
                      .+||||||++.+ ||+|+||||
T Consensus        81 ~igAvNti~~~~-~g~l~G~NT  101 (101)
T d1nyta2          81 LAGAVNTLMRLE-DGRLLGDNT  101 (101)
T ss_dssp             HHTCCSEEEECT-TSCEEEECC
T ss_pred             HhCcEEEEEECC-CCeEEEeCC
Confidence            999999999873 899999999

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=8.4e-32  Score=258.43  Aligned_cols=164  Identities=30%  Similarity=0.454  Sum_probs=133.2

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHH---HHHHHHHHHCCcc
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYD---RARELAETVGGHA  428 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~---ka~~la~~~~~~~  428 (616)
                      ||.||+++|+..           +.++++|+|+|+|+||+|||++++|.+.|+ +|+|+||+.+   ++++++++++...
T Consensus         1 D~~Gf~~~l~~~-----------~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~   69 (182)
T d1vi2a1           1 DGTGHIRAIKES-----------GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT   69 (182)
T ss_dssp             HHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHc-----------CCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc
Confidence            899999999753           257899999999999999999999999999 8999999754   5555666654211


Q ss_pred             ------cchhc---ccccCCCCccEEEEcCCCCCCCCCCCC-ccccccccCccEEEEEeeCCcccHHHHHHHHcCCeEEc
Q 007151          429 ------LSLAD---LENFNPEDGMILANTTSIGMQPKVDET-PIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVS  498 (616)
Q Consensus       429 ------~~~~~---l~~~~~~~~divInat~~gm~p~~~~~-pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~  498 (616)
                            .++.+   +.+ ....+|+||||||+||.|..++. +++...+.+..+++|++|+|.+|+|++.|+++||++++
T Consensus        70 ~~~~~~~~~~~~~~~~~-~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T~ll~~a~~~g~~~i~  148 (182)
T d1vi2a1          70 DCVVTVTDLADQQAFAE-ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTID  148 (182)
T ss_dssp             SCEEEEEETTCHHHHHH-HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHTTTCEEEC
T ss_pred             CcceEeeecccccchhh-hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccccHHHHHHHHCcCeEec
Confidence                  12222   211 23458999999999998754433 34445678889999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHHcCCCCCCchHHHHHHH
Q 007151          499 GLEMFIGQAYEQYERFTGLPGKMNAPHLYKFF  530 (616)
Q Consensus       499 Gl~MLv~Qa~~qf~lwtG~~~p~~~~~l~~~l  530 (616)
                      |++||++||+.||++|||+++|.+.+  |+.|
T Consensus       149 Gl~Mli~Qa~~~f~iwtg~~~~~~~~--~~~l  178 (182)
T d1vi2a1         149 GYGMLLWQGAEQFTLWTGKDFPLEYV--KQVM  178 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCHHHH--HHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCHHHH--HHHH
Confidence            99999999999999999999887766  6765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=99.97  E-value=4.8e-31  Score=250.87  Aligned_cols=163  Identities=20%  Similarity=0.307  Sum_probs=128.3

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cc
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LS  430 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~  430 (616)
                      ||.||+++|++.           +.++++|+|+|+|+||+||+++++|.+.+.+|+|+||+.++++++++.++...  ..
T Consensus         1 D~~Gf~~~l~~~-----------~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~   69 (171)
T d1p77a1           1 DGIGLVTDLQRL-----------NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA   69 (171)
T ss_dssp             HHHHHHHHHHHT-----------TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE
T ss_pred             CHHHHHHHHHHc-----------CCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccch
Confidence            899999999752           24678999999999999999999999866699999999999999999986321  11


Q ss_pred             hhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEee-CCcccHHHHHHHHcCCe-EEccHHHHHHHHH
Q 007151          431 LADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVY-TPKITRLLREAEESGAT-IVSGLEMFIGQAY  508 (616)
Q Consensus       431 ~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y-~P~~T~ll~~A~~~G~~-~i~Gl~MLv~Qa~  508 (616)
                      ++.. +.....+|++|||||+||.+.  ..+++.+.+.+..+++|++| +|.+|+|+++|+++|+. +++|++||++||+
T Consensus        70 ~~~~-~~~~~~~diiIN~tp~g~~~~--~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl~Ml~~Qa~  146 (171)
T d1p77a1          70 VSMD-SIPLQTYDLVINATSAGLSGG--TASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAA  146 (171)
T ss_dssp             EEGG-GCCCSCCSEEEECCCC---------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSHHHHHHHHH
T ss_pred             hhhc-cccccccceeeeccccccccc--ccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcHHHHHHHHH
Confidence            1111 113467899999999999764  33444556677889999999 58899999999999995 7799999999999


Q ss_pred             HHHHHHcCCCCCCchHHHHHHHH
Q 007151          509 EQYERFTGLPGKMNAPHLYKFFV  531 (616)
Q Consensus       509 ~qf~lwtG~~~p~~~~~l~~~l~  531 (616)
                      .||++|||.++|.+.+  ++.|+
T Consensus       147 ~~f~iwtg~~~~~~~~--~~~l~  167 (171)
T d1p77a1         147 HSFHLWRGVMPDFVSV--YEQLK  167 (171)
T ss_dssp             HHHHHHHSCCCCHHHH--HHHHH
T ss_pred             HHHHHHHCCCCChHHH--HHHHH
Confidence            9999999998776544  66653

>d1nvta2 c.58.1.5 (A:1-110) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=1.6e-31  Score=235.73  Aligned_cols=104  Identities=45%  Similarity=0.670  Sum_probs=99.6

Q ss_pred             ccCCCCceEEEEeccCcccccCHHHHHHHHHHcCCCeeEeccCc--ccHHHHHHHhccCCCCeEEEcccchHHHHhhhcc
Q 007151          247 RQMGPDTKVFGIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLV--DDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDE  324 (616)
Q Consensus       247 r~~~~~t~~~~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~--~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~  324 (616)
                      .+++++|++|||||+||+||+||.|||++|+++|+|+.|.++++  ++++.+++.+++.+|.|+|||||||++++++||+
T Consensus         5 ~mi~~~tk~~gliG~pi~~S~SP~ihn~~~~~~gi~~~y~~~~v~~~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~   84 (110)
T d1nvta2           5 SMINAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDE   84 (110)
T ss_dssp             BCCCTTCEEEEEEESSCTTCSHHHHHHHHHHHTTCCEEEEEEECCGGGGGGHHHHHHHHTCCEEEECTTSTTGGGGGCSE
T ss_pred             cccCCCccEEEEEcCCcccccCHHHHHHHHHHcCCcEEEeecccCHHHHHHHHHhhcccCcchhheehHHHHHHHHHhcc
Confidence            36888999999999999999999999999999999999999988  4799999999888999999999999999999999


Q ss_pred             ccHhHhhhcceeEEEEeccCCeEEEEec
Q 007151          325 VDTVAKSIGAVNCIIRRQSDGKLFGYNT  352 (616)
Q Consensus       325 ls~~A~~iGAVNTIv~~~~dg~l~G~NT  352 (616)
                      +|+.|+.+||||||++.  +|+|+||||
T Consensus        85 ~s~~a~~igavNti~~~--~~~l~G~NT  110 (110)
T d1nvta2          85 IDKDAQLIGAVNTIKIE--DGKAIGYNT  110 (110)
T ss_dssp             ECHHHHHHTCCCEEEEE--TTEEEEECC
T ss_pred             CCHHHHHhCcEEEEEEE--CCEEEEeCC
Confidence            99999999999999997  899999999

>d1npya2 c.58.1.5 (A:1-102) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Shikimate dehydrogenase-like
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=99.96  E-value=3.4e-30  Score=224.21  Aligned_cols=101  Identities=25%  Similarity=0.443  Sum_probs=96.7

Q ss_pred             cCCCCceEE-EEeccCcccccCHHHHHHHHHHcCCCeeEeccCcccHHHHHHHhccCCCCeEEEcccchHHHHhhhcccc
Q 007151          248 QMGPDTKVF-GIIGKPVGHSKSPILYNEAFKSVGFNGVFVHLLVDDIAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVD  326 (616)
Q Consensus       248 ~~~~~t~~~-~liG~Pi~hS~SP~ihn~~f~~lgl~~~Y~~~~~~~l~~~~~~l~~~~~~G~nVT~P~K~~v~~~lD~ls  326 (616)
                      +++++|++| +++|+|  ||+||.|||++|+++|+|+.|.++++++++++++.+++.+|.|+|||||||+++++++|++|
T Consensus         1 mi~~~t~~~~~i~g~P--~s~SP~ihn~~~~~~gi~~~Y~~~~v~~l~~~~~~~~~~~~~G~nVT~P~K~~~~~~~d~~s   78 (102)
T d1npya2           1 MINKDTQLCMSLSGRP--SNFGTTFHNYLYDKLGLNFIYKAFTTQDIEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIH   78 (102)
T ss_dssp             CCCTTCEEEEEECSSC--CSHHHHHHHHHHHHHTCCEEEEEECCSCHHHHHHHHHHHTCCEEEECTTCTTTTGGGCSEEC
T ss_pred             CcCCCCEEEEEEcCCc--ccCCHHHHHHHHHHcCCCeEEeeEecccHHHHHHHHhccccceeEEehhHHHHHHHHhhhCC
Confidence            467889995 899999  88999999999999999999999999999999999998999999999999999999999999


Q ss_pred             HhHhhhcceeEEEEeccCCeEEEEec
Q 007151          327 TVAKSIGAVNCIIRRQSDGKLFGYNT  352 (616)
Q Consensus       327 ~~A~~iGAVNTIv~~~~dg~l~G~NT  352 (616)
                      +.|+.+||||||+++  +|+|+||||
T Consensus        79 ~~a~~igAvNti~~~--~g~l~G~NT  102 (102)
T d1npya2          79 PSAQAIESVNTIVND--NGFLRAYNT  102 (102)
T ss_dssp             HHHHTTTCCCEEEEE--TTEEEEECH
T ss_pred             hhhhhcCcEEEEEEE--CCEEEEeCC
Confidence            999999999999987  899999998

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=99.28  E-value=3.1e-12  Score=118.52  Aligned_cols=128  Identities=25%  Similarity=0.425  Sum_probs=92.4

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++++++++|+|+|++|+.++..|...|+ +++|+||+.+++++++++++..+.+++++.+ .+.++|+||+||+.+. |.
T Consensus        21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~-~l~~~Divi~atss~~-~i   98 (159)
T d1gpja2          21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVD-HLARSDVVVSATAAPH-PV   98 (159)
T ss_dssp             CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHH-HHHTCSEEEECCSSSS-CC
T ss_pred             CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHH-HhccCCEEEEecCCCC-cc
Confidence            6789999999999999999999999999 8999999999999999999988888887766 4567999999999653 22


Q ss_pred             CCCCccccc-cc---cCccEEEEEeeCCc-ccHHHHHHHHcCCe--EEccHHHHHHHHHHH
Q 007151          457 VDETPIPKH-AL---GHYALVFDAVYTPK-ITRLLREAEESGAT--IVSGLEMFIGQAYEQ  510 (616)
Q Consensus       457 ~~~~pi~~~-~l---~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~--~i~Gl~MLv~Qa~~q  510 (616)
                      .+...+... ..   ....+++|+.+ |+ ..|-+.  +-.|+.  -++.+++++.+..+.
T Consensus        99 i~~~~i~~~~~~r~~~~~~~iiDlav-Pr~vd~~v~--~~~~v~l~~ld~l~~~~~~n~~~  156 (159)
T d1gpja2          99 IHVDDVREALRKRDRRSPILIIDIAN-PRDVEEGVE--NIEDVEVRTIDDLRVIARENLER  156 (159)
T ss_dssp             BCHHHHHHHHHHCSSCCCEEEEECCS-SCSBCTTGG--GSTTEEEEEHHHHHHHHHHHHHH
T ss_pred             ccHhhhHHHHHhcccCCCeEEEeecC-CCCcChhhh--ccCCeEEEeHHHHHHHHHHHHHH
Confidence            111111110 01   12358999985 54 333322  223443  456788887776554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.21  E-value=8.7e-12  Score=118.57  Aligned_cols=116  Identities=24%  Similarity=0.338  Sum_probs=86.7

Q ss_pred             EEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 007151          349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  427 (616)
Q Consensus       349 G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~  427 (616)
                      |+|||+.|.+..+.+..          +.+++||+++|+|+ ||+|++++..|++.|++|++++|+.++++++++.+...
T Consensus         1 g~~~~~~~~v~~~~~~~----------~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   70 (191)
T d1luaa1           1 GSNTTAAAGVALVVKAA----------GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR   70 (191)
T ss_dssp             GHHHHHHHHHHHHHHHT----------TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHc----------CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc
Confidence            78999999999886543          36899999999997 79999999999999999999999999999998877421


Q ss_pred             ------ccch---hcccccCCCCccEEEEcCCCCCCCCCCCCccccccc---cCccEEEEEeeCCc
Q 007151          428 ------ALSL---ADLENFNPEDGMILANTTSIGMQPKVDETPIPKHAL---GHYALVFDAVYTPK  481 (616)
Q Consensus       428 ------~~~~---~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l---~~~~~v~Di~Y~P~  481 (616)
                            ..++   +++.+ ...+.|+|||+++.|+..      ++.+.+   ....++.|+.+.|.
T Consensus        71 ~~~~~~~~d~~~~~~~~~-~~~~iDilin~Ag~g~~~------~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1          71 FKVNVTAAETADDASRAE-AVKGAHFVFTAGAIGLEL------LPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             HTCCCEEEECCSHHHHHH-HTTTCSEEEECCCTTCCC------BCHHHHHTCTTCCEEEECCCSSS
T ss_pred             cchhhhhhhcccHHHHHH-HhcCcCeeeecCcccccc------CCHHHHHhhhcceeehhHhhHHH
Confidence                  1222   23333 356789999999987532      222222   23346777777654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.63  E-value=6.7e-09  Score=95.35  Aligned_cols=112  Identities=19%  Similarity=0.251  Sum_probs=78.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch------hcccccCCCCccEEEEcCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL------ADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~------~~l~~~~~~~~divInat~~gm~  454 (616)
                      +|+|+|+|||.+|+.+|+.|.+.|++|+|+|||.++++++++.++......      ..... .....|+++.++|....
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~i~~~~~~~~   80 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDA-EVAKHDLVISLIPYTFH   80 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHH-HHTTSSEEEECSCGGGH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHh-hhhccceeEeeccchhh
Confidence            589999999999999999999999999999999999999999876432111      11111 23456888887774311


Q ss_pred             CCCCCCccccccccCccEEEEEeeCCcc-cHHHHHHHHcCCeEEc
Q 007151          455 PKVDETPIPKHALGHYALVFDAVYTPKI-TRLLREAEESGATIVS  498 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-T~ll~~A~~~G~~~i~  498 (616)
                           ..+..........++|+.|.+.. ..+.+.+++.+....+
T Consensus        81 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  120 (182)
T d1e5qa1          81 -----ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMN  120 (182)
T ss_dssp             -----HHHHHHHHHHTCEEECSSCCCHHHHHTHHHHHHTTCEEEC
T ss_pred             -----hHHHHHHHhhccceeecccCcHHHHHHHHHhccccceeeh
Confidence                 11112234455778899887654 4556677777766554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=2.5e-07  Score=90.37  Aligned_cols=75  Identities=28%  Similarity=0.338  Sum_probs=60.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-c--cchhc---cccc--CCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-A--LSLAD---LENF--NPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~--~~~~~---l~~~--~~~~~divIna  448 (616)
                      +|+||++||+|+ +|+|++++..|++.|++|++++|+.++++++++++... .  +|+.+   +++.  ..+..|++||+
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            578999999998 59999999999999999999999999999999887542 1  23322   2111  45679999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        82 Ag~~   85 (242)
T d1cyda_          82 AALV   85 (242)
T ss_dssp             CCCC
T ss_pred             Cccc
Confidence            9864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.40  E-value=2.1e-07  Score=90.97  Aligned_cols=75  Identities=29%  Similarity=0.483  Sum_probs=60.0

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      +|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +|+.+   +.++      .....|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            478999999998 599999999999999999999999999999999987532    23322   1111      346789


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        81 ilVnnAg~~   89 (243)
T d1q7ba_          81 ILVNNAGIT   89 (243)
T ss_dssp             EEEECCCCC
T ss_pred             eehhhhhhc
Confidence            999998764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=3.8e-07  Score=89.16  Aligned_cols=75  Identities=31%  Similarity=0.403  Sum_probs=60.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc---ccchhc---cccc--CCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH---ALSLAD---LENF--NPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~---~~~~~~---l~~~--~~~~~divIna  448 (616)
                      .++||++||+|+ +|+|+++|..|++.|++|++++|+.+++++++++++..   .+|+.+   ++++  ..+..|++||+
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            578999999998 69999999999999999999999999999999887642   123322   2111  45679999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        84 Ag~~   87 (244)
T d1pr9a_          84 AAVA   87 (244)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.37  E-value=2.5e-07  Score=91.22  Aligned_cols=75  Identities=29%  Similarity=0.350  Sum_probs=60.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      +|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +|+.+   +.++      .....|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            578999999998 599999999999999999999999999999999887532    23322   1111      235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 ilVnnAg~~   90 (254)
T d1hdca_          82 GLVNNAGIS   90 (254)
T ss_dssp             EEEECCCCC
T ss_pred             EEEecCccc
Confidence            999999865

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=4.7e-07  Score=88.62  Aligned_cols=75  Identities=24%  Similarity=0.324  Sum_probs=60.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    .|+.+   +.++      .....|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            578999999998 699999999999999999999999999999999986532    23322   1111      235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ilinnAG~~   91 (244)
T d1nffa_          83 VLVNNAGIL   91 (244)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccc
Confidence            999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.33  E-value=3.2e-07  Score=90.25  Aligned_cols=74  Identities=32%  Similarity=0.438  Sum_probs=60.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      |+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...    +|+.+   +.++      .....|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            67999999998 699999999999999999999999999999999997643    23322   1111      2357899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        83 lVnnAg~~   90 (256)
T d1k2wa_          83 LVNNAALF   90 (256)
T ss_dssp             EEECCCCC
T ss_pred             EEeecccc
Confidence            99999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.32  E-value=4e-07  Score=88.89  Aligned_cols=75  Identities=29%  Similarity=0.317  Sum_probs=59.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~div  445 (616)
                      .++||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...  +|+.+   ++++      .....|++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            368999999998 699999999999999999999999999999998887543  23322   2111      23568999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        82 VnnAG~~   88 (242)
T d1ulsa_          82 VHYAGIT   88 (242)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=5.6e-07  Score=88.32  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=59.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc---cchhc---cccc------CCCCccE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA---LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~---~~~~~---l~~~------~~~~~di  444 (616)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.+++++++++++...   .|+.+   ++++      .....|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            578999999998 699999999999999999999999999999999876421   23322   2111      2356899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        83 lVnnAG~~   90 (250)
T d1ydea1          83 VVNNAGHH   90 (250)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=5.3e-07  Score=88.24  Aligned_cols=77  Identities=19%  Similarity=0.286  Sum_probs=60.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhcc---ccc------CCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLADL---ENF------NPE  440 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l---~~~------~~~  440 (616)
                      ++.||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    +|+.+.   .++      ..+
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            688999999998 5999999999999999999999999999999887642   21    233221   110      356


Q ss_pred             CccEEEEcCCCCCC
Q 007151          441 DGMILANTTSIGMQ  454 (616)
Q Consensus       441 ~~divInat~~gm~  454 (616)
                      ..|++||+++.+..
T Consensus        84 ~idilinnag~~~~   97 (244)
T d1yb1a_          84 DVSILVNNAGVVYT   97 (244)
T ss_dssp             CCSEEEECCCCCCC
T ss_pred             CCceeEeecccccc
Confidence            78999999998643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.28  E-value=4.4e-07  Score=89.12  Aligned_cols=75  Identities=25%  Similarity=0.417  Sum_probs=57.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~------~~  439 (616)
                      +++||+++|+|+ +|+|+++|..|++.|++|.+++|+.++++++++++    +.+.    .|+.+   +.++      ..
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999998 59999999999999999999999999888776554    3322    23322   1111      24


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        82 g~iDiLVnnAG~~   94 (251)
T d1vl8a_          82 GKLDTVVNAAGIN   94 (251)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            5789999999864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.27  E-value=7.2e-07  Score=87.50  Aligned_cols=75  Identities=28%  Similarity=0.367  Sum_probs=59.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--cc----cchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--~~----~~~~~---l~~~------~~~~  441 (616)
                      .|+||++||+|+ +|+|++++..|++.|++|++++|+.+++++++++++.  ..    .|+.+   +.++      ..+.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            478999999998 6999999999999999999999999999999998863  11    23322   1111      2456


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        83 iDiLVnnAg~~   93 (251)
T d1zk4a1          83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEeccccc
Confidence            89999999765

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.26  E-value=8.8e-07  Score=87.56  Aligned_cols=75  Identities=23%  Similarity=0.342  Sum_probs=59.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc------ccchhc---cccc------CCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------ALSLAD---LENF------NPED  441 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~------~~~~~~---l~~~------~~~~  441 (616)
                      .|+||.|||+|+ +|+|+++|..|++.|++|++++|+.+++++++++++..      .+|+.+   +.++      ....
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999998 59999999999999999999999999999999998642      123322   1111      2357


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        83 iD~lVnnAG~~   93 (268)
T d2bgka1          83 LDIMFGNVGVL   93 (268)
T ss_dssp             CCEEEECCCCC
T ss_pred             cceeccccccc
Confidence            89999999864

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.25  E-value=9e-07  Score=86.78  Aligned_cols=77  Identities=18%  Similarity=0.245  Sum_probs=60.4

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~  439 (616)
                      +.++||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    .|+.+   +.++      ..
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999999998 6999999999999999999999999999999888742   21    23322   1110      34


Q ss_pred             CCccEEEEcCCCCC
Q 007151          440 EDGMILANTTSIGM  453 (616)
Q Consensus       440 ~~~divInat~~gm  453 (616)
                      +..|++||+++...
T Consensus        86 g~iDilvnnag~~~   99 (251)
T d2c07a1          86 KNVDILVNNAGITR   99 (251)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCceeeeecccccc
Confidence            67899999987653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.25  E-value=7e-07  Score=87.70  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=60.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .|+||+++|+|+ +|+|++++..|++.|++|++++|+.+++++++++++...    .++.+   +.++      .....|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999998 599999999999999999999999999999999997643    22221   1111      245689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        83 ilVnnAG~~   91 (253)
T d1hxha_          83 VLVNNAGIL   91 (253)
T ss_dssp             EEEECCCCC
T ss_pred             eEEeccccc
Confidence            999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.24  E-value=9.1e-07  Score=87.13  Aligned_cols=76  Identities=20%  Similarity=0.197  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~  439 (616)
                      ++|+||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   ..    .|+.+   +.++      ..
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            5789999999998 5999999999999999999999999999999887742   11    23321   1110      23


Q ss_pred             C-CccEEEEcCCCC
Q 007151          440 E-DGMILANTTSIG  452 (616)
Q Consensus       440 ~-~~divInat~~g  452 (616)
                      . ..|++||+++..
T Consensus        84 ~~~idilvnnAG~~   97 (259)
T d2ae2a_          84 HGKLNILVNNAGIV   97 (259)
T ss_dssp             TTCCCEEEECCCCC
T ss_pred             CCCceEEEECCcee
Confidence            3 589999999865

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.23  E-value=6.7e-07  Score=88.91  Aligned_cols=74  Identities=23%  Similarity=0.304  Sum_probs=59.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCccE
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      ++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++.++++...    .++.+   +.++      .....|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            68999999998 699999999999999999999999999999999887543    23221   1110      2456899


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++..
T Consensus        83 lvnnAG~~   90 (276)
T d1bdba_          83 LIPNAGIW   90 (276)
T ss_dssp             EECCCCCC
T ss_pred             cccccccc
Confidence            99999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.21  E-value=6e-07  Score=88.40  Aligned_cols=77  Identities=22%  Similarity=0.302  Sum_probs=57.9

Q ss_pred             ccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH----CCcc----cchhc---cccc------
Q 007151          376 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETV----GGHA----LSLAD---LENF------  437 (616)
Q Consensus       376 ~~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~----~~~~----~~~~~---l~~~------  437 (616)
                      ..+++||++||+|+ +|+|+++|..|++.|++|++++|+.++++++++++    +.+.    +|+.+   +.++      
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999998 59999999999999999999999987776665544    4332    23322   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        84 ~~g~iDilVnnAg~~   98 (260)
T d1h5qa_          84 DLGPISGLIANAGVS   98 (260)
T ss_dssp             HSCSEEEEEECCCCC
T ss_pred             HhCCCcEeccccccc
Confidence            346799999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.18  E-value=2.1e-06  Score=84.48  Aligned_cols=76  Identities=24%  Similarity=0.218  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~  439 (616)
                      ++++||+|||+|+ +|+|++++..|++.|++|++++|+.++++++++++..   ..    +|+.+   ++++      ..
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4789999999997 6999999999999999999999999999998887642   11    23321   1110      12


Q ss_pred             -CCccEEEEcCCCC
Q 007151          440 -EDGMILANTTSIG  452 (616)
Q Consensus       440 -~~~divInat~~g  452 (616)
                       ...|++||+++..
T Consensus        82 ~g~idilinnag~~   95 (258)
T d1ae1a_          82 DGKLNILVNNAGVV   95 (258)
T ss_dssp             TSCCCEEEECCCCC
T ss_pred             CCCcEEEecccccc
Confidence             4589999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.16  E-value=1.2e-06  Score=87.31  Aligned_cols=77  Identities=25%  Similarity=0.365  Sum_probs=59.0

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc---cccc------C
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD---LENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~---l~~~------~  438 (616)
                      .+++||++||+|+ ||+|+++|..|++.|++|++++|+.++++++++++.    ...    +++.+   +.++      .
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            4799999999997 799999999999999999999999998888776653    221    23221   1110      3


Q ss_pred             CCCccEEEEcCCCCC
Q 007151          439 PEDGMILANTTSIGM  453 (616)
Q Consensus       439 ~~~~divInat~~gm  453 (616)
                      ....|++||+++.+.
T Consensus       101 ~g~iDilvnnAg~~~  115 (294)
T d1w6ua_         101 AGHPNIVINNAAGNF  115 (294)
T ss_dssp             TCSCSEEEECCCCCC
T ss_pred             ccccchhhhhhhhcc
Confidence            467899999998653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.9e-06  Score=86.53  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC--------cc----cchhc---cccc---
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG--------HA----LSLAD---LENF---  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~--------~~----~~~~~---l~~~---  437 (616)
                      ..|+||+|||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..        ++    .|+.+   +.++   
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4589999999998 5999999999999999999999999999998887631        11    23322   1111   


Q ss_pred             ---CCCCccEEEEcCCCC
Q 007151          438 ---NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ---~~~~~divInat~~g  452 (616)
                         .....|++||+++..
T Consensus        88 ~~~~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCeEEEEeecccc
Confidence               235689999998754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.16  E-value=9.9e-07  Score=87.56  Aligned_cols=75  Identities=23%  Similarity=0.353  Sum_probs=57.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchhc---cccc------C
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLAD---LENF------N  438 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~------~~----~~~~~---l~~~------~  438 (616)
                      |+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..      ..    .|+.+   +.++      .
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            67999999998 5999999999999999999999999999999887631      11    23322   1111      2


Q ss_pred             CCCccEEEEcCCCCC
Q 007151          439 PEDGMILANTTSIGM  453 (616)
Q Consensus       439 ~~~~divInat~~gm  453 (616)
                      .+..|++||+++...
T Consensus        82 ~G~iDilVnnAG~~~   96 (274)
T d1xhla_          82 FGKIDILVNNAGANL   96 (274)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCceEEEeeccccc
Confidence            356899999998653

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.15  E-value=8.1e-07  Score=87.34  Aligned_cols=76  Identities=29%  Similarity=0.425  Sum_probs=59.3

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      ..++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .+.    .|+.+   +.++      ..
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4589999999998 599999999999999999999999999999988774   222    23322   1110      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        87 g~iDilvnnAG~~   99 (255)
T d1fmca_          87 GKVDILVNNAGGG   99 (255)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEeeeCCcCC
Confidence            5689999999865

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.14  E-value=1.5e-06  Score=85.63  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=57.8

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------CCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------NPED  441 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~~~~  441 (616)
                      |+||+++|+|+ +|+|++++..|++.|++|++++|+.++++++++++..   ++    +|+.+   +.++      ....
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999998 5999999999999999999999999999999887742   21    23321   1110      2356


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        83 iDilVnnaG~~   93 (260)
T d1zema1          83 IDFLFNNAGYQ   93 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCeehhhhccc
Confidence            89999998853

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=1.8e-06  Score=84.84  Aligned_cols=75  Identities=27%  Similarity=0.337  Sum_probs=58.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-----cc----cchhc---cccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-----HA----LSLAD---LENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-----~~----~~~~~---l~~~------~  438 (616)
                      .++||.|||+|+ +|+|+++|..|++.|++|++++|+.++++++++++..     ..    +|+.+   +.++      .
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            589999999998 5999999999999999999999999999999887742     11    23322   1111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|++||+++..
T Consensus        87 ~g~iD~lVnnAg~~  100 (257)
T d1xg5a_          87 HSGVDICINNAGLA  100 (257)
T ss_dssp             HCCCSEEEECCCCC
T ss_pred             cCCCCEEEeccccc
Confidence            45689999999865

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.14  E-value=1.4e-06  Score=84.86  Aligned_cols=75  Identities=24%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc------CCCCcc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      .|+||++||+|+ +|+|+++|..|++.|++|++.+|+.++++++.++++.+.    .|+.+   +.++      .....|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            368999999998 599999999999999999999999999999999987643    23321   1111      235689


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 iLinnAg~~   90 (241)
T d2a4ka1          82 GVAHFAGVA   90 (241)
T ss_dssp             EEEEGGGGT
T ss_pred             Eeccccccc
Confidence            999998754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.13  E-value=1.7e-06  Score=84.96  Aligned_cols=72  Identities=21%  Similarity=0.255  Sum_probs=56.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCcc
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      ||.+||+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .++    .|+.+   +.++      .....|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            789999998 599999999999999999999999999999988763   222    23322   1111      346789


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 ilVnnAG~~   90 (257)
T d2rhca1          82 VLVNNAGRP   90 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999999865

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2e-06  Score=84.32  Aligned_cols=73  Identities=26%  Similarity=0.365  Sum_probs=57.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-----c----cchhc---cccc------CCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----A----LSLAD---LENF------NPE  440 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-----~----~~~~~---l~~~------~~~  440 (616)
                      +||.+||+|+ +|+|+++|..|++.|++|++++|+.++.+++++++...     .    +|+.+   ++++      ..+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999998 69999999999999999999999999999998887431     1    23322   1111      235


Q ss_pred             CccEEEEcCCCC
Q 007151          441 DGMILANTTSIG  452 (616)
Q Consensus       441 ~~divInat~~g  452 (616)
                      ..|++||+++..
T Consensus        82 ~iDilVnnAg~~   93 (254)
T d2gdza1          82 RLDILVNNAGVN   93 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcCeeccccccc
Confidence            789999999875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.13  E-value=1.3e-06  Score=86.01  Aligned_cols=74  Identities=18%  Similarity=0.272  Sum_probs=56.7

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-----Ccc----cchhc---cccc------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-----GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-----~~~----~~~~~---l~~~------~~  439 (616)
                      |+||+++|+|+ +|+|++++..|++.|++|++++|+.++++++++++.     .+.    .|+.+   +.++      ..
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            67999999998 599999999999999999999999999888876652     122    23322   1111      24


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      +..|++||+++..
T Consensus        82 G~iDiLVnnAG~~   94 (258)
T d1iy8a_          82 GRIDGFFNNAGIE   94 (258)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            5689999999854

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.13  E-value=1.2e-06  Score=86.24  Aligned_cols=76  Identities=20%  Similarity=0.096  Sum_probs=58.6

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------C-
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA----LSLAD---LENF------N-  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~-  438 (616)
                      ++++||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..   +.    +|+.+   +.++      . 
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5789999999998 5999999999999999999999999999999887742   11    23321   1110      1 


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        84 ~g~idilvnnAG~~   97 (259)
T d1xq1a_          84 GGKLDILINNLGAI   97 (259)
T ss_dssp             TTCCSEEEEECCC-
T ss_pred             CCCccccccccccc
Confidence            24589999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.12  E-value=1.3e-06  Score=86.42  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=58.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc------c----cchhc---cccc------
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH------A----LSLAD---LENF------  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~------~----~~~~~---l~~~------  437 (616)
                      .|+||+++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++...      .    .|+.+   +.++      
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999998 69999999999999999999999999999998877321      1    23322   1111      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        82 ~~g~iDilvnnAG~~   96 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAA   96 (272)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCceEEEeCCccc
Confidence            235689999999865

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.07  E-value=1.4e-06  Score=85.86  Aligned_cols=74  Identities=23%  Similarity=0.321  Sum_probs=56.4

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC------cc----cchhc---cccc------C
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG------HA----LSLAD---LENF------N  438 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~------~~----~~~~~---l~~~------~  438 (616)
                      |+||.++|+|+ +|+|+++|..|++.|++|++++|+.++++++++++..      ..    .|+.+   +.++      .
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999998 6999999999999999999999999999999887631      11    23321   1111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        83 ~g~iDilvnnAG~~   96 (264)
T d1spxa_          83 FGKLDILVNNAGAA   96 (264)
T ss_dssp             HSCCCEEEECCC--
T ss_pred             hCCCCEeecccccc
Confidence            35789999999864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.04  E-value=3.6e-06  Score=82.28  Aligned_cols=74  Identities=31%  Similarity=0.454  Sum_probs=56.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchhc---cccc------CCCCccEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLAD---LENF------NPEDGMIL  445 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~------~~~~~div  445 (616)
                      .|+||++||+|+ +|+|+++|..|++.|++|++++|+.++ .++++..+...  +|+.+   ++++      .....|++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            368999999998 699999999999999999999999765 55677776543  23322   1111      24578999


Q ss_pred             EEcCCCC
Q 007151          446 ANTTSIG  452 (616)
Q Consensus       446 Inat~~g  452 (616)
                      ||+++..
T Consensus        81 VnnAG~~   87 (248)
T d2d1ya1          81 VNNAAIA   87 (248)
T ss_dssp             EECCCCC
T ss_pred             EEeCcCC
Confidence            9999864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.02  E-value=3.2e-06  Score=82.48  Aligned_cols=75  Identities=28%  Similarity=0.368  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcc----cchhc---cccc------CCCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHA----LSLAD---LENF------NPEDG  442 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~----~~~~~---l~~~------~~~~~  442 (616)
                      .|+||.++|+|+ +|+|+++|..|++.|++|++++|+. +.+++..+..+.+.    .|+.+   +.++      .....
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999998 5999999999999999999999975 45566666666543    23322   1111      24578


Q ss_pred             cEEEEcCCCC
Q 007151          443 MILANTTSIG  452 (616)
Q Consensus       443 divInat~~g  452 (616)
                      |++||+++..
T Consensus        82 DilVnnAG~~   91 (247)
T d2ew8a1          82 DILVNNAGIY   91 (247)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.00  E-value=3e-06  Score=83.52  Aligned_cols=75  Identities=27%  Similarity=0.396  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      +++||+++|+|+ +|+|+++|..|++.|++|.+++|+. ++++++++++.   .++    +|+.+   +.++      ..
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999998 6999999999999999999999974 56777766653   222    23322   1111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        84 G~iDiLVnnAG~~   96 (261)
T d1geea_          84 GKLDVMINNAGLE   96 (261)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEeeccceec
Confidence            5689999999865

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.00  E-value=1.8e-06  Score=83.47  Aligned_cols=71  Identities=23%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc----ccccCCCCccEEEEcCCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD----LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~----l~~~~~~~~divInat~~g  452 (616)
                      ++||++||+|+ +|+|++++..|++.|++|++++|+.+++++...++  ...++.+    +.+ ...+.|++||+++..
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~--~~~Dv~~~~~~~~~-~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY--VVCDLRKDLDLLFE-KVKEVDILVLNAGGP   77 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEE--EECCTTTCHHHHHH-HSCCCSEEEECCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcE--EEcchHHHHHHHHH-HhCCCcEEEeccccc
Confidence            57999999998 69999999999999999999999987765542211  1123321    112 356789999999854

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.99  E-value=2.4e-06  Score=83.89  Aligned_cols=74  Identities=26%  Similarity=0.353  Sum_probs=54.5

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHH----CCcc----cchhc---cccc------CC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETV----GGHA----LSLAD---LENF------NP  439 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~----~~~~----~~~~~---l~~~------~~  439 (616)
                      |+||+++|+|+ +|+|+++|..|++.|++|++++|+ .++++++++++    +...    .|+.+   +.++      ..
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57999999998 599999999999999999999996 56677766544    3222    23322   2111      23


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        82 G~iDiLVnnAG~~   94 (260)
T d1x1ta1          82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCcEEEeecccc
Confidence            5689999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.98  E-value=4.8e-06  Score=81.53  Aligned_cols=71  Identities=28%  Similarity=0.392  Sum_probs=54.6

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~di  444 (616)
                      |.+||+|+ +|+|+++|..|++.|++|++++|+.++++++++++.   .+.    +|+.+   +.++      ..+..|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            55799998 599999999999999999999999999999988763   222    23322   1111      3467999


Q ss_pred             EEEcCCCC
Q 007151          445 LANTTSIG  452 (616)
Q Consensus       445 vInat~~g  452 (616)
                      +||+++.+
T Consensus        82 lVnnAG~~   89 (255)
T d1gega_          82 IVNNAGVA   89 (255)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999865

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.6e-06  Score=83.11  Aligned_cols=74  Identities=26%  Similarity=0.370  Sum_probs=57.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh------cccccCCCCccEEEEc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA------DLENFNPEDGMILANT  448 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~------~l~~~~~~~~divIna  448 (616)
                      .|+||++||+|+ +|+|++++..|++.|++|++++|+.++++++++..+...  .++.      .... .....|++||+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~id~lVn~   81 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFAN-EVERLDVLFNV   81 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHH-HCSCCSEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccccc-ccccceeEEec
Confidence            378999999998 699999999999999999999999999988877655322  1221      1111 24568999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        82 ag~~   85 (245)
T d2ag5a1          82 AGFV   85 (245)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=5.8e-06  Score=81.43  Aligned_cols=74  Identities=24%  Similarity=0.302  Sum_probs=56.5

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC----Ccc----cchhc----------ccccC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVG----GHA----LSLAD----------LENFN  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~----~~~----~~~~~----------l~~~~  438 (616)
                      .++||+++|+|| +|+|+++|..|++.|++|++++|+.++++++++++.    ...    .+.++          ... .
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~   89 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK-L   89 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHH-H
Confidence            389999999998 599999999999999999999999999999887653    111    11111          111 2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|++||+++..
T Consensus        90 ~g~~~~li~nag~~  103 (269)
T d1xu9a_          90 MGGLDMLILNHITN  103 (269)
T ss_dssp             HTSCSEEEECCCCC
T ss_pred             hCCccccccccccc
Confidence            34679999998765

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.1e-06  Score=82.01  Aligned_cols=72  Identities=22%  Similarity=0.327  Sum_probs=54.0

Q ss_pred             CcEE-EEEcc-chhHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHCC---cc----cchhcccc---c------CCCC
Q 007151          381 GKLF-VVIGA-GGAGKALAYGAKAK-GARVVIANRTYDRARELAETVGG---HA----LSLADLEN---F------NPED  441 (616)
Q Consensus       381 ~k~v-lVlGA-GGagrAia~~L~~~-G~~V~v~nRt~~ka~~la~~~~~---~~----~~~~~l~~---~------~~~~  441 (616)
                      ||+| ||+|+ +|+|+++|..|++. |++|++++|+.++++++++++..   ..    +|+.+.++   +      ....
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4555 78898 59999999999986 77999999999999999888742   11    23332211   1      2356


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||++++.
T Consensus        82 iDiLVnNAGi~   92 (275)
T d1wmaa1          82 LDVLVNNAGIA   92 (275)
T ss_dssp             EEEEEECCCCC
T ss_pred             cEEEEEcCCcC
Confidence            89999999875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.88  E-value=6.3e-06  Score=82.89  Aligned_cols=98  Identities=18%  Similarity=0.257  Sum_probs=64.8

Q ss_pred             cccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC---------CHHHHHHHHHHHCCcc----cch---hccccc--
Q 007151          377 SALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR---------TYDRARELAETVGGHA----LSL---ADLENF--  437 (616)
Q Consensus       377 ~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR---------t~~ka~~la~~~~~~~----~~~---~~l~~~--  437 (616)
                      ..++||+++|+|+ +|+|+++|..|++.|++|++.+|         +.+.+++++++++...    .++   ++.+++  
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            4688999999998 59999999999999999999854         5667788877765321    121   111110  


Q ss_pred             ----CCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeC
Q 007151          438 ----NPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYT  479 (616)
Q Consensus       438 ----~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~  479 (616)
                          ..+..|++||+++... +    .++.+.....+.-++|++..
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~-~----~~~~~~~~e~~~~~~~vNl~  123 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILR-D----RSFSRISDEDWDIIQRVHLR  123 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCC-C----CCGGGCCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCccCC-C----CChhhCCHHHHhhhhceeeh
Confidence                3467899999998753 2    13332222333445666653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=2.4e-06  Score=70.75  Aligned_cols=37  Identities=24%  Similarity=0.260  Sum_probs=34.3

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +++||+++|+|.|.+|+++|..|.+.|++|++++.+.
T Consensus         2 ~~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             CCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CcCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCc
Confidence            5789999999999999999999999999999999853

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.84  E-value=9.4e-06  Score=79.98  Aligned_cols=77  Identities=21%  Similarity=0.342  Sum_probs=56.3

Q ss_pred             ccccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHHHC---Ccc----cchhc---cccc------
Q 007151          376 SSALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT-YDRARELAETVG---GHA----LSLAD---LENF------  437 (616)
Q Consensus       376 ~~~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt-~~ka~~la~~~~---~~~----~~~~~---l~~~------  437 (616)
                      ...++||++||+|+ +|+|++++..|++.|++|++++|+ .+.++++++++.   ...    .++.+   +.++      
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            45699999999998 699999999999999999998775 677777776553   221    22221   1110      


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++..
T Consensus        93 ~~g~idilV~nag~~  107 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVV  107 (272)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCCCccccccccc
Confidence            235689999999764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.79  E-value=8.9e-06  Score=79.63  Aligned_cols=75  Identities=20%  Similarity=0.336  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NP  439 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~  439 (616)
                      +|+||+|||+|+ +|+|++++..|++.|++|++. +|+.+.++++++++.   ...    .|+.+   +.++      ..
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            688999999998 699999999999999999885 667777777766653   222    23221   1110      24


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        83 g~idilinnag~~   95 (259)
T d1ja9a_          83 GGLDFVMSNSGME   95 (259)
T ss_dssp             SCEEEEECCCCCC
T ss_pred             CCCcEEEeccccc
Confidence            5689999999865

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.75  E-value=6.3e-05  Score=70.99  Aligned_cols=130  Identities=21%  Similarity=0.254  Sum_probs=88.6

Q ss_pred             CHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh
Q 007151          353 DYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA  432 (616)
Q Consensus       353 D~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~  432 (616)
                      .+.|.+.+++..++.. +     ..+++||+|+|-|.|.+|+.++..|.+.|++|++++.+.++..... .++...++.+
T Consensus         5 Ta~Gv~~~~~~~~~~~-g-----~~~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~~~~~   77 (201)
T d1c1da1           5 TAVGVFEAMKATVAHR-G-----LGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAVALE   77 (201)
T ss_dssp             HHHHHHHHHHHHHHHT-T-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEECCGG
T ss_pred             hHHHHHHHHHHHHHHh-C-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccccCcc
Confidence            3578888887655431 1     1368999999999999999999999999999999999988766543 4455555555


Q ss_pred             cccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccH-HHHHHHHcCCeEEc
Q 007151          433 DLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR-LLREAEESGATIVS  498 (616)
Q Consensus       433 ~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~-ll~~A~~~G~~~i~  498 (616)
                      ++-.   .++||++-|+--+.-   +....  ..+ +.+++++-.-+|..++ .-+.-+++|+.+++
T Consensus        78 ~~~~---~~~DI~iPcA~~~~I---~~~~a--~~i-~ak~i~e~AN~p~~~~~~~~~L~~rgI~~iP  135 (201)
T d1c1da1          78 DVLS---TPCDVFAPCAMGGVI---TTEVA--RTL-DCSVVAGAANNVIADEAASDILHARGILYAP  135 (201)
T ss_dssp             GGGG---CCCSEEEECSCSCCB---CHHHH--HHC-CCSEECCSCTTCBCSHHHHHHHHHTTCEECC
T ss_pred             cccc---ccceeeecccccccc---cHHHH--hhh-hhheeeccCCCCcchhhHHHHhcccceEEEe
Confidence            5433   458999987654321   11111  112 2467777776776555 33455788998875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.73  E-value=1.9e-05  Score=76.82  Aligned_cols=75  Identities=17%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHHHCCcc----cchhc----------ccc-c-
Q 007151          378 ALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRA-RELAETVGGHA----LSLAD----------LEN-F-  437 (616)
Q Consensus       378 ~l~~k~vlVlGA-G--GagrAia~~L~~~G~~V~v~nRt~~ka-~~la~~~~~~~----~~~~~----------l~~-~-  437 (616)
                      -++||++||+|| |  |+|+++|.+|++.|++|++.+|+.++. ++++++++...    +++.+          +.+ + 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            478999999996 4  799999999999999999999987765 55666665432    12211          111 1 


Q ss_pred             CCCCccEEEEcCCCC
Q 007151          438 NPEDGMILANTTSIG  452 (616)
Q Consensus       438 ~~~~~divInat~~g  452 (616)
                      .....|++||+++.+
T Consensus        83 ~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFM   97 (268)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             cCCCcceeeeccccc
Confidence            245689999999864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=1.5e-05  Score=77.69  Aligned_cols=76  Identities=25%  Similarity=0.334  Sum_probs=52.2

Q ss_pred             cccCCcEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEECCHHHHH---HHHHHHCCc-c--cchh---ccccc------C
Q 007151          377 SALAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRAR---ELAETVGGH-A--LSLA---DLENF------N  438 (616)
Q Consensus       377 ~~l~~k~vlVlGA-G--GagrAia~~L~~~G~~V~v~nRt~~ka~---~la~~~~~~-~--~~~~---~l~~~------~  438 (616)
                      .+++||+++|+|| |  |+|+++|..|++.|++|++..|+.+..+   +.....+.. .  .++.   +++++      .
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            5789999999998 4  7999999999999999999999854333   233332221 1  1221   11111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|++||+++..
T Consensus        84 ~g~iDilVnnag~~   97 (256)
T d1ulua_          84 FGGLDYLVHAIAFA   97 (256)
T ss_dssp             HSSEEEEEECCCCC
T ss_pred             cCCceEEEeccccc
Confidence            35689999998764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.72  E-value=3.6e-05  Score=70.35  Aligned_cols=97  Identities=19%  Similarity=0.236  Sum_probs=70.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc----chhcccccCCCCccEEEEcCCCCCC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL----SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~----~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      .+..+|+|+|+|-+|+.++..+..+|++|++++++.++.+.+...++....    +-+.+.+ ...++|+||.|+-+.-.
T Consensus        30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~-~~~~aDivI~aalipG~  108 (168)
T d1pjca1          30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEECCCCTTS
T ss_pred             CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHH-hhccCcEEEEeeecCCc
Confidence            456799999999999999999999999999999999999999888764321    1112222 34568999998854211


Q ss_pred             CCCCCCccccc---cccCccEEEEEee
Q 007151          455 PKVDETPIPKH---ALGHYALVFDAVY  478 (616)
Q Consensus       455 p~~~~~pi~~~---~l~~~~~v~Di~Y  478 (616)
                      +  .+..+..+   ..+++.+++|+.-
T Consensus       109 ~--aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         109 R--APILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             S--CCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             c--cCeeecHHHHhhcCCCcEEEEeec
Confidence            1  11224444   3578899999976

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2.2e-05  Score=75.92  Aligned_cols=50  Identities=24%  Similarity=0.360  Sum_probs=46.2

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  427 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~  427 (616)
                      .++||.+||+|+ +|+|+++|.+|++.|++|++++|+.+++++++++++..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            478999999998 59999999999999999999999999999999998753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.65  E-value=1.4e-05  Score=78.14  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=51.6

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---HHCC-cc----cch----hccccc------C
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAE---TVGG-HA----LSL----ADLENF------N  438 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~---~~~~-~~----~~~----~~l~~~------~  438 (616)
                      +++||+|+|+|+ +|+|+++|..|++.|++|+++.|+.++.+++++   ..+. ..    .++    +++.++      .
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999998 599999999999999998888776555444433   2222 11    122    112111      2


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      ....|+|||+++..
T Consensus        82 ~g~iDilvnnAG~~   95 (254)
T d1sbya1          82 LKTVDILINGAGIL   95 (254)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEeCCCCC
Confidence            35689999999853

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.65  E-value=3.4e-06  Score=81.85  Aligned_cols=71  Identities=18%  Similarity=0.336  Sum_probs=50.7

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchh---ccccc------CCCCccEEEE
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLA---DLENF------NPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~---~l~~~------~~~~~divIn  447 (616)
                      +++||++||+|+ +|+|++++..|++.|++|++++|+.++.+++.    ...+++.   ++.++      .....|++||
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhcCCceEEEe
Confidence            589999999998 59999999999999999999999865433221    0011221   11110      2356899999


Q ss_pred             cCCCC
Q 007151          448 TTSIG  452 (616)
Q Consensus       448 at~~g  452 (616)
                      +++..
T Consensus        80 nAG~~   84 (237)
T d1uzma1          80 NAGLS   84 (237)
T ss_dssp             ECSCC
T ss_pred             eeccc
Confidence            99864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.64  E-value=3.3e-05  Score=74.73  Aligned_cols=70  Identities=19%  Similarity=0.332  Sum_probs=53.5

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCe-------EEEEECCHHHHHHHHHHHCC---cc----cchhc---cccc------C
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGAR-------VVIANRTYDRARELAETVGG---HA----LSLAD---LENF------N  438 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~-------V~v~nRt~~ka~~la~~~~~---~~----~~~~~---l~~~------~  438 (616)
                      .|||+|+ +|+|+++|..|++.|++       |.+++|+.++++++++++..   ..    .|+.+   +.++      .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789998 59999999999999987       99999999999999888743   11    23322   1110      3


Q ss_pred             CCCccEEEEcCCCC
Q 007151          439 PEDGMILANTTSIG  452 (616)
Q Consensus       439 ~~~~divInat~~g  452 (616)
                      .+..|++||+++..
T Consensus        83 ~g~iDilvnnAg~~   96 (240)
T d2bd0a1          83 YGHIDCLVNNAGVG   96 (240)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             cCCcceeecccccc
Confidence            46789999999865

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.60  E-value=4.4e-05  Score=74.62  Aligned_cols=73  Identities=15%  Similarity=0.263  Sum_probs=52.0

Q ss_pred             cCCcEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEECCH---HHHHHHHHHHCCcc---cchh----------cccccCC
Q 007151          379 LAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTY---DRARELAETVGGHA---LSLA----------DLENFNP  439 (616)
Q Consensus       379 l~~k~vlVlGA-G--GagrAia~~L~~~G~~V~v~nRt~---~ka~~la~~~~~~~---~~~~----------~l~~~~~  439 (616)
                      |+||++||+|+ |  |+|+|+|.+|++.|++|++++|+.   ++++++.+..+...   .++.          ++.+ ..
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-DL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-Hc
Confidence            68999999997 5  799999999999999999999985   34455555433211   1111          1111 34


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+.+..
T Consensus        82 g~id~lV~nag~~   94 (274)
T d2pd4a1          82 GSLDFIVHSVAFA   94 (274)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCeEEeecccc
Confidence            6789999988754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=97.56  E-value=0.00053  Score=65.72  Aligned_cols=131  Identities=16%  Similarity=0.166  Sum_probs=93.0

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  433 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~  433 (616)
                      +.|.+.+++..+....+     ..+++|++|+|-|-|.+|+.++..|.+.|++|++++.+..+...+....+....+.++
T Consensus        17 g~GV~~~~~~~~~~~~g-----~~~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~   91 (230)
T d1leha1          17 AYGVYRGMKAAAKEAFG-----SDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNA   91 (230)
T ss_dssp             HHHHHHHHHHHHHHHHS-----SCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGG
T ss_pred             HHHHHHHHHHHHHHhcC-----CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcc
Confidence            57777777654432111     2468999999999999999999999999999999999999999998888876655554


Q ss_pred             ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccH-HHHHHHHcCCeEEc
Q 007151          434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITR-LLREAEESGATIVS  498 (616)
Q Consensus       434 l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~-ll~~A~~~G~~~i~  498 (616)
                      +-+   ..+||++-|+--+..   ++..+  ..+. .++++.-.-+|..|| -.+.-+++|+.+++
T Consensus        92 ~~~---~~cDIl~PcA~~~~I---~~~~~--~~l~-ak~Ive~ANn~~t~~ea~~~L~~rGI~~iP  148 (230)
T d1leha1          92 IYG---VTCDIFAPCALGAVL---NDFTI--PQLK-AKVIAGSADNQLKDPRHGKYLHELGIVYAP  148 (230)
T ss_dssp             TTT---CCCSEEEECSCSCCB---STTHH--HHCC-CSEECCSCSCCBSSHHHHHHHHHHTCEECC
T ss_pred             ccc---ccccEeccccccccc---ChHHh--hccC-ccEEEecccCCCCCchHHHHHHhhCcEEEe
Confidence            432   458999988875432   11111  1232 467777776777664 33345678998775

>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Shikimate kinase (AroK)
domain: Shikimate kinase (AroK)
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=8.7e-06  Score=71.81  Aligned_cols=31  Identities=13%  Similarity=0.097  Sum_probs=28.8

Q ss_pred             ccccceecccccCCccchhchhhhhhcCcee
Q 007151          538 NKFHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      ||.+|+|+|+||+||||++|.||+.|+.+++
T Consensus         1 ~~k~I~l~G~~GsGKSTvak~La~~L~~~~i   31 (169)
T d1kaga_           1 EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFY   31 (169)
T ss_dssp             CCCCEEEECCTTSCHHHHHHHHHHHTTCEEE
T ss_pred             CCCeEEEECCCCCCHHHHHHHHHHHhCCCeE
Confidence            5678999999999999999999999999886

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.53  E-value=2.2e-05  Score=76.24  Aligned_cols=73  Identities=22%  Similarity=0.317  Sum_probs=53.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc----cchhc---cccc--------CCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA----LSLAD---LENF--------NPED  441 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~----~~~~~---l~~~--------~~~~  441 (616)
                      +.|+|||+|| +|+|+++|.+|++.|+  +|++.+|+.++++++.+..+...    +|+.+   +.++        ....
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            3589999998 5999999999999996  68889999999998876654322    23322   1111        1124


Q ss_pred             ccEEEEcCCCC
Q 007151          442 GMILANTTSIG  452 (616)
Q Consensus       442 ~divInat~~g  452 (616)
                      .|++||+++..
T Consensus        82 idilinnAG~~   92 (250)
T d1yo6a1          82 LSLLINNAGVL   92 (250)
T ss_dssp             CCEEEECCCCC
T ss_pred             eEEEEEcCccc
Confidence            89999999875

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.52  E-value=5.2e-05  Score=68.62  Aligned_cols=43  Identities=26%  Similarity=0.416  Sum_probs=39.8

Q ss_pred             EEEEE-ccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC
Q 007151          383 LFVVI-GAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG  425 (616)
Q Consensus       383 ~vlVl-GAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~  425 (616)
                      |+.|+ |+|++|+++|..|++.|++|.+++|+++++++++++++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            57788 78999999999999999999999999999999988875

>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Shikimate kinase (AroK)
domain: Shikimate kinase (AroK)
species: Campylobacter jejuni [TaxId: 197]

Probab=97.49  E-value=1.1e-05  Score=73.19  Aligned_cols=29  Identities=10%  Similarity=0.098  Sum_probs=27.5

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      |++||||||+||||+||.||+.++.+|+=
T Consensus         2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d   30 (161)
T d1viaa_           2 NIVFIGFMGSGKSTLARALAKDLDLVFLD   30 (161)
T ss_dssp             CEEEECCTTSCHHHHHHHHHHHHTCEEEE
T ss_pred             cEEEECCCCCCHHHHHHHHHHHhCCCEEe
Confidence            78999999999999999999999999983

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.48  E-value=6.2e-05  Score=74.26  Aligned_cols=42  Identities=26%  Similarity=0.292  Sum_probs=37.3

Q ss_pred             cccCCcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHHHH
Q 007151          377 SALAGKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRAR  418 (616)
Q Consensus       377 ~~l~~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~ka~  418 (616)
                      .+++||++||+||+   |+|+++|..|++.|++|++.+|+.....
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~   48 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI   48 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhh
Confidence            57999999999985   8999999999999999999999765443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00035  Score=63.50  Aligned_cols=126  Identities=18%  Similarity=0.235  Sum_probs=85.8

Q ss_pred             HHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 007151          355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  433 (616)
Q Consensus       355 ~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~  433 (616)
                      .|++.-|+..           +.++.||+++|+|-+. .|+-++..|.+.|++|+++.+.....++.             
T Consensus        22 ~aI~~lL~~y-----------~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~-------------   77 (166)
T d1b0aa1          22 RGIVTLLERY-----------NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-------------   77 (166)
T ss_dssp             HHHHHHHHHT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-------------
T ss_pred             HHHHHHHHHc-----------CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH-------------
Confidence            5777776642           3678999999999985 89999999999999999998753322211             


Q ss_pred             ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcc-------cHHHHHHHH-cCCe--EEccH---
Q 007151          434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKI-------TRLLREAEE-SGAT--IVSGL---  500 (616)
Q Consensus       434 l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~-------T~ll~~A~~-~G~~--~i~Gl---  500 (616)
                           ..++|++|.+++.   |+    .+..++++++.+++|+-.++.+       -.+ ..+++ ..+.  +-.|+   
T Consensus        78 -----~~~ADivI~a~G~---p~----~i~~~~vk~g~vvIDvGi~~~~~~~~~Gdvd~-~~v~~~a~~~TPvPGGVGP~  144 (166)
T d1b0aa1          78 -----VENADLLIVAVGK---PG----FIPGDWIKEGAIVIDVGINRLENGKVVGDVVF-EDAAKRASYITPVPGGVGPM  144 (166)
T ss_dssp             -----HHHCSEEEECSCC---TT----CBCTTTSCTTCEEEECCCEECTTSCEECSBCH-HHHHHHCSEECCSSSSSHHH
T ss_pred             -----HhhhhHhhhhccC---cc----cccccccCCCcEEEecCceecCCCCEEecccc-HhHHhheeEeCCCCCcccHH
Confidence                 1237999998884   22    2566788999999998876421       112 23333 3322  22333   


Q ss_pred             --HHHHHHHHHHHHHHcCC
Q 007151          501 --EMFIGQAYEQYERFTGL  517 (616)
Q Consensus       501 --~MLv~Qa~~qf~lwtG~  517 (616)
                        .||+...+.+++.|...
T Consensus       145 Tva~L~~N~v~a~~~~~~~  163 (166)
T d1b0aa1         145 TVATLIENTLQACVEYHDP  163 (166)
T ss_dssp             HHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHHHhCc
Confidence              67888888888877653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.39  E-value=6.9e-05  Score=67.75  Aligned_cols=110  Identities=13%  Similarity=0.184  Sum_probs=73.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      +|-|+|.|-||+++|..|.+.|++|+++||++++++++.+.......+..++    ..++|+++-+.|-+-  .....-+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~----~~~~d~ii~~v~~~~--~v~~v~~   75 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAI----AEQCDVIITMLPNSP--HVKEVAL   75 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHH----HHHCSEEEECCSSHH--HHHHHHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHH----HhCCCeEEEEcCCHH--HHHHHHh
Confidence            5889999999999999999999999999999999999876532222223322    234799998887421  1010001


Q ss_pred             cc----ccccCccEEEEEeeCCccc--HHHHHHHHcCCeEEc
Q 007151          463 PK----HALGHYALVFDAVYTPKIT--RLLREAEESGATIVS  498 (616)
Q Consensus       463 ~~----~~l~~~~~v~Di~Y~P~~T--~ll~~A~~~G~~~i~  498 (616)
                      ..    ..+.++.+++|+.-....+  .+.+.++++|..+++
T Consensus        76 ~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vd  117 (161)
T d1vpda2          76 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLD  117 (161)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceec
Confidence            11    1245778999998754443  233455567887664

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.39  E-value=9.3e-05  Score=66.98  Aligned_cols=111  Identities=15%  Similarity=0.172  Sum_probs=74.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++|.++|.|-||.++|..|.+.|++|+++||+.++.+.+.+.-.....+..+.    ....|+++-+.+.....  ...-
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~----~~~~diii~~v~~~~~~--~~v~   75 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDA----VQGADVVISMLPASQHV--EGLY   75 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHH----HTSCSEEEECCSCHHHH--HHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhh----ccccCeeeecccchhhH--HHHH
Confidence            47999999999999999999999999999999999888765422222222222    23478999888743111  0000


Q ss_pred             c-c---cccccCccEEEEEeeC-Ccc-cHHHHHHHHcCCeEEc
Q 007151          462 I-P---KHALGHYALVFDAVYT-PKI-TRLLREAEESGATIVS  498 (616)
Q Consensus       462 i-~---~~~l~~~~~v~Di~Y~-P~~-T~ll~~A~~~G~~~i~  498 (616)
                      . .   ...+.++.+++|..-. |.. ..+-+.++++|..+++
T Consensus        76 ~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~d  118 (162)
T d3cuma2          76 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD  118 (162)
T ss_dssp             HSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             hccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEe
Confidence            0 0   1135677899999875 433 3455566678887764

>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Shikimate kinase (AroK)
domain: Shikimate kinase (AroK)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.36  E-value=2e-05  Score=71.38  Aligned_cols=29  Identities=14%  Similarity=-0.015  Sum_probs=27.0

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +++++||||+||||+|+.||+.++.+|+=
T Consensus         3 ~IvliG~~G~GKSTig~~La~~l~~~fiD   31 (165)
T d2iyva1           3 KAVLVGLPGSGKSTIGRRLAKALGVGLLD   31 (165)
T ss_dssp             SEEEECSTTSSHHHHHHHHHHHHTCCEEE
T ss_pred             cEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence            57899999999999999999999999973

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.36  E-value=0.00012  Score=70.79  Aligned_cols=71  Identities=27%  Similarity=0.406  Sum_probs=51.7

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEE-ECCHHHHHHHHHHHC---Ccc----cchhc---cccc------CCCCcc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIA-NRTYDRARELAETVG---GHA----LSLAD---LENF------NPEDGM  443 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~-nRt~~ka~~la~~~~---~~~----~~~~~---l~~~------~~~~~d  443 (616)
                      +.|||+|+ +|+|+++|..|++.|++|++. .|+.++++++++++.   .+.    .|+.+   +.++      .....|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899998 699999999999999999885 678888888877653   322    23322   1111      246789


Q ss_pred             EEEEcCCCC
Q 007151          444 ILANTTSIG  452 (616)
Q Consensus       444 ivInat~~g  452 (616)
                      ++||+++..
T Consensus        82 iLVnnAg~~   90 (244)
T d1edoa_          82 VVVNNAGIT   90 (244)
T ss_dssp             EEEECCCCC
T ss_pred             ccccccccc
Confidence            999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.34  E-value=0.00022  Score=63.67  Aligned_cols=64  Identities=23%  Similarity=0.326  Sum_probs=51.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKG-ARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G-~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      ++.++|+|-||.+++..|.+.| .+|++++|+.+++++++++++....+  +.+  ...++|+||-|++
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~--~~~--~v~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSA--TLP--ELHSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEES--SCC--CCCTTSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccc--ccc--cccccceEEEecC
Confidence            5889999999999999999888 49999999999999999988654322  222  2345899998876

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.0004  Score=62.94  Aligned_cols=89  Identities=27%  Similarity=0.300  Sum_probs=62.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-CCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETV-GGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~-~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.||+++|+|.|-+||.+|..+...|++|+++++++-++-+  ... +.+..++++.    ...+|++|-||+--  .
T Consensus        20 ~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~--A~~dG~~v~~~~~a----~~~adivvtaTGn~--~   91 (163)
T d1li4a1          20 VMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQ--AAMEGYEVTTMDEA----CQEGNIFVTTTGCI--D   91 (163)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HHHTTCEECCHHHH----TTTCSEEEECSSCS--C
T ss_pred             ceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHH--hhcCceEeeehhhh----hhhccEEEecCCCc--c
Confidence            5789999999999999999999999999999999999876433  333 3344444432    34579999888731  1


Q ss_pred             CCCCCccccc---cccCccEEEEEee
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVY  478 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y  478 (616)
                           -+..+   .++++.++..+-.
T Consensus        92 -----vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          92 -----IILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             -----SBCHHHHTTCCTTEEEEECSS
T ss_pred             -----chhHHHHHhccCCeEEEEecc
Confidence                 12222   3456666666543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.32  E-value=0.00015  Score=65.92  Aligned_cols=71  Identities=21%  Similarity=0.209  Sum_probs=52.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-----------c-chhcccccCCCCccEEEEc
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-----------L-SLADLENFNPEDGMILANT  448 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-----------~-~~~~l~~~~~~~~divIna  448 (616)
                      +|++.|+|+|.+|.+++..|++.|++|++++|++++.+.+.+.-....           . ...+..+ ...++|++|-+
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL-AVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH-HHTTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHh-HhcCCCEEEEE
Confidence            378999999999999999999999999999999999888765422100           0 0112222 24568999999


Q ss_pred             CCCC
Q 007151          449 TSIG  452 (616)
Q Consensus       449 t~~g  452 (616)
                      ++..
T Consensus        80 v~~~   83 (184)
T d1bg6a2          80 VPAI   83 (184)
T ss_dssp             SCGG
T ss_pred             Echh
Confidence            8854

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.31  E-value=0.00013  Score=66.86  Aligned_cols=112  Identities=19%  Similarity=0.191  Sum_probs=73.9

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-----ccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-----ALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-----~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      .+++-|||.|-||.++|..|.+.|++|+++||++++++++.++-...     ....+++.+ .....|+++-+.+.+-. 
T Consensus         2 ~~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~-~~~~~~~ii~~~~~~~~-   79 (176)
T d2pgda2           2 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVS-KLKKPRRIILLVKAGQA-   79 (176)
T ss_dssp             CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHH-HBCSSCEEEECSCTTHH-
T ss_pred             CCcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhh-hhcccceEEEecCchHH-
Confidence            35789999999999999999999999999999999999997753211     112223222 23446788776664310 


Q ss_pred             CCCCCcccc---ccccCccEEEEEeeC-Cccc-HHHHHHHHcCCeEE
Q 007151          456 KVDETPIPK---HALGHYALVFDAVYT-PKIT-RLLREAEESGATIV  497 (616)
Q Consensus       456 ~~~~~pi~~---~~l~~~~~v~Di~Y~-P~~T-~ll~~A~~~G~~~i  497 (616)
                       .  ..+..   ..+.++.+++|+.-. |..+ .+.+..+++|..++
T Consensus        80 -v--~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~~~l  123 (176)
T d2pgda2          80 -V--DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV  123 (176)
T ss_dssp             -H--HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred             -H--HHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCCcee
Confidence             0  01111   134677899999874 4443 34455567888655

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.30  E-value=0.00034  Score=60.74  Aligned_cols=117  Identities=18%  Similarity=0.269  Sum_probs=76.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      +|+|+|+|..|+.++..|.+.|.+|+++++++++.+.++++++...+     +.+-+.+....++|.++-+|+-.     
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d-----   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-----   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-----
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH-----
Confidence            68999999999999999999999999999999999999888764332     22223333466789999877631     


Q ss_pred             CCCcc--c--cccccCccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHHHHHHHH
Q 007151          458 DETPI--P--KHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYE  509 (616)
Q Consensus       458 ~~~pi--~--~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~MLv~Qa~~  509 (616)
                       +..+  .  ...+....++ =.+.+|...   +..++.|...+=--+++..+.+.
T Consensus        77 -~~N~~~~~~~k~~~~~~iI-~~~~~~~~~---~~l~~~G~d~vi~p~~~~a~~i~  127 (132)
T d1lssa_          77 -EVNLMSSLLAKSYGINKTI-ARISEIEYK---DVFERLGVDVVVSPELIAANYIE  127 (132)
T ss_dssp             -HHHHHHHHHHHHTTCCCEE-EECSSTTHH---HHHHHTTCSEEECHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHcCCceEE-EEecCHHHH---HHHHHCCCCEEECHHHHHHHHHH
Confidence             1111  0  0123333443 344455443   44567788543335566555444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.26  E-value=0.00018  Score=61.08  Aligned_cols=40  Identities=20%  Similarity=0.264  Sum_probs=36.3

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      ..+++||+|+|+|+|.+|.+-+..|.+.|++|++++.+..
T Consensus         7 ~l~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3578999999999999999999999999999999987653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.24  E-value=0.00041  Score=62.73  Aligned_cols=69  Identities=26%  Similarity=0.298  Sum_probs=54.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHC-CcccchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVG-GHALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~-~~~~~~~~l~~~~~~~~divInat~~  451 (616)
                      ..+.||+++|+|.|-+||.+|..|...|++|+|+.+++-+|-+.  ... .+..++++    .....|++|-+|+-
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--~mdGf~v~~~~~----a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA--VMEGFNVVTLDE----IVDKGDFFITCTGN   88 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--HTTTCEECCHHH----HTTTCSEEEECCSS
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH--HhcCCccCchhH----ccccCcEEEEcCCC
Confidence            56899999999999999999999999999999999999765443  332 23444443    24568999999983

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.21  E-value=9.2e-05  Score=71.53  Aligned_cols=72  Identities=17%  Similarity=0.289  Sum_probs=50.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHC--Ccc----cchhcc---ccc--------CC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKA---KGARVVIANRTYDRARELAETVG--GHA----LSLADL---ENF--------NP  439 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~---~G~~V~v~nRt~~ka~~la~~~~--~~~----~~~~~l---~~~--------~~  439 (616)
                      -|+|||+|| +|+|+++|.+|.+   .|++|+++.|+.++++++.+...  ...    +|+.+.   +++        ..
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            478999998 5999999999864   68899999999988877754321  211    233221   110        12


Q ss_pred             CCccEEEEcCCCC
Q 007151          440 EDGMILANTTSIG  452 (616)
Q Consensus       440 ~~~divInat~~g  452 (616)
                      ...|++||+++..
T Consensus        82 ~~iDiLvnNAg~~   94 (248)
T d1snya_          82 QGLNVLFNNAGIA   94 (248)
T ss_dssp             GCCSEEEECCCCC
T ss_pred             CCcceEEeecccc
Confidence            4689999998864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.20  E-value=0.0003  Score=62.94  Aligned_cols=87  Identities=17%  Similarity=0.199  Sum_probs=63.4

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      ++.++|+|-+|.+++..|.+.|.++++++|+.++.++++++++.... +.+++.    ..+|+|+-|++....+     .
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~----~~~dvIilavkp~~~~-----~   72 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLI----DQVDLVILGIKPQLFE-----T   72 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHH----HTCSEEEECSCGGGHH-----H
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhh----hccceeeeecchHhHH-----H
Confidence            58899999999999999999999999999999999999999876542 333332    3479999887532111     1


Q ss_pred             cccccccCccEEEEEeeC
Q 007151          462 IPKHALGHYALVFDAVYT  479 (616)
Q Consensus       462 i~~~~l~~~~~v~Di~Y~  479 (616)
                      +. ..+.+...++++.-.
T Consensus        73 vl-~~l~~~~~iis~~ag   89 (152)
T d2ahra2          73 VL-KPLHFKQPIISMAAG   89 (152)
T ss_dssp             HH-TTSCCCSCEEECCTT
T ss_pred             Hh-hhcccceeEeccccc
Confidence            11 124556777777643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=0.00019  Score=69.66  Aligned_cols=48  Identities=31%  Similarity=0.471  Sum_probs=43.4

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKA---KGARVVIANRTYDRARELAETVG  425 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~---~G~~V~v~nRt~~ka~~la~~~~  425 (616)
                      +++||.++|+|+ +|+|+++|..|++   .|++|++++|+.++++++++++.
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~   54 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG   54 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHH
Confidence            578999999998 5999999999986   68899999999999999988763

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.17  E-value=0.00046  Score=62.07  Aligned_cols=90  Identities=20%  Similarity=0.152  Sum_probs=60.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      |+.|+|+|-+|.++|..|.+.|.+|++++|+.+++++..+. +......++++  ...++|+||-|+|.+...    .-+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~-~~~~~~~~~~~--~~~~~DiIilavp~~~~~----~vl   74 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER-QLVDEAGQDLS--LLQTAKIIFLCTPIQLIL----PTL   74 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TSCSEEESCGG--GGTTCSEEEECSCHHHHH----HHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh-hccceeeeecc--cccccccccccCcHhhhh----hhh
Confidence            68999999999999999999999999999998887765443 21111112222  235689999999854211    001


Q ss_pred             c--cccccCccEEEEEeeC
Q 007151          463 P--KHALGHYALVFDAVYT  479 (616)
Q Consensus       463 ~--~~~l~~~~~v~Di~Y~  479 (616)
                      .  ...+.+..++.|+.-.
T Consensus        75 ~~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHHGGGSCTTCEEEECCSC
T ss_pred             hhhhhhcccccceeecccc
Confidence            1  1235677899998643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.15  E-value=0.00048  Score=61.36  Aligned_cols=73  Identities=21%  Similarity=0.338  Sum_probs=52.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-c------cchhcccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-A------LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~-~------~~~~~l~~~~~~~~divInat~~  451 (616)
                      ++|+.|+|+|.+|.++++.|+..|.  +|++++++.++++..+.++..- .      ..-.+.++  ..++|++|.|++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~--~~~adivvitag~   82 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD--CKDADLVVITAGA   82 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG--GTTCSEEEECCCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH--hccccEEEEeccc
Confidence            5689999999999999999999884  8999999999988887766321 0      11112222  3568999999987


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      ...|
T Consensus        83 ~~~~   86 (146)
T d1ez4a1          83 PQKP   86 (146)
T ss_dssp             ----
T ss_pred             ccCC
Confidence            6544

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.14  E-value=8.2e-05  Score=72.28  Aligned_cols=70  Identities=13%  Similarity=0.116  Sum_probs=49.2

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cccch---hccccc------CCCCccEEEEcCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HALSL---ADLENF------NPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~~~~---~~l~~~------~~~~~divInat~~  451 (616)
                      ++||+|+ +|+|+++|..|++.|++|.+.+|+.++.+++...... ..+++   +++.++      ..+..|++||+++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            6899998 5999999999999999999999988777766543211 11111   111110      24578999998875


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        82 ~   82 (252)
T d1zmta1          82 A   82 (252)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.002  Score=58.67  Aligned_cols=91  Identities=21%  Similarity=0.226  Sum_probs=68.4

Q ss_pred             HHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhc
Q 007151          355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLAD  433 (616)
Q Consensus       355 ~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGG-agrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~  433 (616)
                      .|++..|++.           +.+++||+|+|+|.+. .||-++..|.+.|+.|++++++.....+              
T Consensus        24 ~aii~lL~~~-----------~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~--------------   78 (170)
T d1a4ia1          24 KGCLELIKET-----------GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE--------------   78 (170)
T ss_dssp             HHHHHHHHTT-----------TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH--------------
T ss_pred             HHHHHHHHHh-----------CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH--------------
Confidence            5777776642           3689999999999985 8999999999999999999875322111              


Q ss_pred             ccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCc
Q 007151          434 LENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPK  481 (616)
Q Consensus       434 l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~  481 (616)
                          ...++|++|.+++.   |+    .+..++++++.+++|+-.++.
T Consensus        79 ----~~~~aDivi~a~G~---~~----~i~~~~vk~g~iviDvgi~~~  115 (170)
T d1a4ia1          79 ----EVNKGDILVVATGQ---PE----MVKGEWIKPGAIVIDCGINYV  115 (170)
T ss_dssp             ----HHTTCSEEEECCCC---TT----CBCGGGSCTTCEEEECCCBC-
T ss_pred             ----HHhhccchhhcccc---cc----ccccccccCCCeEeccCcccc
Confidence                12358999988884   22    266778999999999987643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.00052  Score=62.81  Aligned_cols=71  Identities=27%  Similarity=0.357  Sum_probs=53.4

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchh-----c----cccc-CCCCccEEEE
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA-----D----LENF-NPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~-----~----l~~~-~~~~~divIn  447 (616)
                      .|.+|+|+|+|++|..++..+...|+ +|++++++++|. +++++++... ++..     +    +.+. ....+|++|+
T Consensus        28 ~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid  106 (182)
T d1vj0a2          28 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE  106 (182)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccchhheecccccccccccccccccccc-cccccccceEEEeccccchHHHHHHHHHhhCCCCceEEee
Confidence            58899999999999999999999999 899999999887 4667787532 2221     1    1111 2345899999


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      +++.
T Consensus       107 ~vG~  110 (182)
T d1vj0a2         107 ATGD  110 (182)
T ss_dssp             CSSC
T ss_pred             cCCc
Confidence            9874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.09  E-value=0.00018  Score=69.46  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=36.5

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVG  425 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~  425 (616)
                      .+||+|| +|+|+++|.+|++.|++|++.+|+. +.++++++++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~   47 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN   47 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHH
Confidence            6899998 5999999999999999999999974 45677776663

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.08  E-value=0.00085  Score=60.57  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=54.0

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhc---ccccCCCCccEEEEcCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLAD---LENFNPEDGMILANTTSIG  452 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~---l~~~~~~~~divInat~~g  452 (616)
                      .|.+|+|+|+|++|..++..+...|++|++++++++|.+ .+++++... ++..+   ..+.....+|.++++++.+
T Consensus        27 ~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECCCCcchhHHHHhhhccccccccccchhHHH-HhhccCCcEEeeccchHHHHHhhhcccceEEEEecCC
Confidence            578999999999999999988889999999999988765 567777543 33221   1111345689999998754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.00059  Score=65.62  Aligned_cols=74  Identities=16%  Similarity=0.194  Sum_probs=50.2

Q ss_pred             cCCcEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEECCHHHHHHH---HHHHCCcc---cchh----------cccccCC
Q 007151          379 LAGKLFVVIGA-G--GAGKALAYGAKAKGARVVIANRTYDRAREL---AETVGGHA---LSLA----------DLENFNP  439 (616)
Q Consensus       379 l~~k~vlVlGA-G--GagrAia~~L~~~G~~V~v~nRt~~ka~~l---a~~~~~~~---~~~~----------~l~~~~~  439 (616)
                      |+||++||+|+ |  |+|+++|..|++.|++|++..|+.+..+.+   ....+...   .+..          +... ..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-VW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-TC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhh-cc
Confidence            68999999997 4  799999999999999999999985433333   22222211   1111          1111 34


Q ss_pred             CCccEEEEcCCCCC
Q 007151          440 EDGMILANTTSIGM  453 (616)
Q Consensus       440 ~~~divInat~~gm  453 (616)
                      ...|++||+++...
T Consensus        82 ~~~d~~v~~a~~~~   95 (258)
T d1qsga_          82 PKFDGFVHSIGFAP   95 (258)
T ss_dssp             SSEEEEEECCCCCC
T ss_pred             cccceEEEeecccc
Confidence            56899999987654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.07  E-value=0.001  Score=60.18  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC-cc-------cchhcccccCCCCccEEEE
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-HA-------LSLADLENFNPEDGMILAN  447 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~-~~-------~~~~~l~~~~~~~~divIn  447 (616)
                      ....+|+.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++.. ..       ....+.+  ...++|+||.
T Consensus        17 ~~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~--~~~~adiVVi   94 (160)
T d1i0za1          17 TVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS--VTANSKIVVV   94 (160)
T ss_dssp             CCCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG--GGTTCSEEEE
T ss_pred             cCCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh--hcccccEEEE
Confidence            3556799999999999999999999986  899999999999888877642 11       1112222  2456899999


Q ss_pred             cCCCCCCC
Q 007151          448 TTSIGMQP  455 (616)
Q Consensus       448 at~~gm~p  455 (616)
                      +++....|
T Consensus        95 tAg~~~~~  102 (160)
T d1i0za1          95 TAGVRQQE  102 (160)
T ss_dssp             CCSCCCCT
T ss_pred             ecCCcccc
Confidence            99876544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00065  Score=61.45  Aligned_cols=71  Identities=25%  Similarity=0.312  Sum_probs=53.2

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCccc-ch-----hcc----cccCCCCccEEEEc
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHAL-SL-----ADL----ENFNPEDGMILANT  448 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~-~~-----~~l----~~~~~~~~divIna  448 (616)
                      .+.+|+|+|+|++|..++..+...|+ +|++++++++|.+ ++++++.... ..     .+.    .......+|++|++
T Consensus        26 ~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~  104 (171)
T d1pl8a2          26 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC  104 (171)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHH-HHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence            46799999999999999999999999 8999999988866 6778876431 11     111    01012468999999


Q ss_pred             CCC
Q 007151          449 TSI  451 (616)
Q Consensus       449 t~~  451 (616)
                      ++.
T Consensus       105 ~G~  107 (171)
T d1pl8a2         105 TGA  107 (171)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            984

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.07  E-value=0.00058  Score=62.36  Aligned_cols=71  Identities=25%  Similarity=0.233  Sum_probs=53.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-ccchhc------cccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLAD------LENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~-~~~~~~------l~~~-~~~~~divInat~  450 (616)
                      .|.+|+|+|+||+|..++..+...|+ +|++++++.+| .+++++++.. .++..+      +.+. ....+|++|+|++
T Consensus        27 ~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r-~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g  105 (174)
T d1jqba2          27 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPIC-VEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGG  105 (174)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHH-HHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSS
T ss_pred             CCCEEEEEcCCcchhhhhhhhhcccccccccccchhhh-HHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccC
Confidence            47899999999999999999999999 89999999888 5566778753 233321      1111 2245899999998


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       106 ~  106 (174)
T d1jqba2         106 G  106 (174)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.05  E-value=0.00092  Score=59.54  Aligned_cols=75  Identities=20%  Similarity=0.298  Sum_probs=56.1

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC------cc--cchhcccccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------HA--LSLADLENFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~------~~--~~~~~l~~~~~~~~divInat  449 (616)
                      .++|+.|+|||.+|.++++.|+..|.  ++.++++++++++..+.++..      ..  +...+.+  ...++|++|.|+
T Consensus         5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~--~l~daDvvvita   82 (148)
T d1ldna1           5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD--DCRDADLVVICA   82 (148)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG--GTTTCSEEEECC
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH--HhccceeEEEec
Confidence            46799999999999999999999885  899999999998888777641      00  1112222  345689999999


Q ss_pred             CCCCCCC
Q 007151          450 SIGMQPK  456 (616)
Q Consensus       450 ~~gm~p~  456 (616)
                      +..-.|.
T Consensus        83 g~~~~~~   89 (148)
T d1ldna1          83 GANQKPG   89 (148)
T ss_dssp             SCCCCTT
T ss_pred             ccccccC
Confidence            8765443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.03  E-value=0.0002  Score=69.80  Aligned_cols=43  Identities=30%  Similarity=0.441  Sum_probs=35.9

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEE-CCHHHHHHHHHHHC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIAN-RTYDRARELAETVG  425 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~n-Rt~~ka~~la~~~~  425 (616)
                      .+||+|+ +|+|+++|..|++.|++|++.. |+.++++++.+++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~   48 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   48 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHH
Confidence            5788898 5999999999999999998864 56788888877663

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.01  E-value=6e-05  Score=72.44  Aligned_cols=36  Identities=17%  Similarity=0.219  Sum_probs=32.4

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +||+|||+|+ ||+|++++..|++.|++|++++|+..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~   37 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN   37 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            4799999998 69999999999999999999988643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=96.95  E-value=0.00021  Score=63.45  Aligned_cols=85  Identities=24%  Similarity=0.219  Sum_probs=54.3

Q ss_pred             EEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcccc
Q 007151          385 VVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPK  464 (616)
Q Consensus       385 lVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~  464 (616)
                      -+||+|-||++++..|.+.+..+.|+||+.+++++++++++..+.+..+    .....|+|+-|+|....+     .+..
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~----~~~~~DiVil~v~d~~i~-----~v~~   73 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK----HPELNGVVFVIVPDRYIK-----TVAN   73 (153)
T ss_dssp             EEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC----CCC---CEEECSCTTTHH-----HHHT
T ss_pred             EEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh----hhccCcEEEEeccchhhh-----HHHh
Confidence            5899999999999988664435578999999999999998765544333    245589999888743211     1211


Q ss_pred             ccccCccEEEEEee
Q 007151          465 HALGHYALVFDAVY  478 (616)
Q Consensus       465 ~~l~~~~~v~Di~Y  478 (616)
                      ..-.+..+++|+.-
T Consensus        74 ~l~~~~~ivi~~s~   87 (153)
T d2i76a2          74 HLNLGDAVLVHCSG   87 (153)
T ss_dssp             TTCCSSCCEEECCS
T ss_pred             hhcccceeeeeccc
Confidence            11134577777763

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.94  E-value=0.0012  Score=59.35  Aligned_cols=71  Identities=28%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cch-------hc----ccccCCCCccEEEE
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSL-------AD----LENFNPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~-------~~----l~~~~~~~~divIn  447 (616)
                      .|.+|+|+|+|++|..++..++..|++|++++++.+|. +++++++... ...       .+    +.+.....+|++|+
T Consensus        26 ~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid  104 (170)
T d1e3ja2          26 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID  104 (170)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             CCCEEEEEcccccchhhHhhHhhhcccccccchHHHHH-HHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence            47899999999999999999999999999999999985 5556666432 111       11    11112345899999


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      +++.
T Consensus       105 ~~g~  108 (170)
T d1e3ja2         105 CSGN  108 (170)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9874

>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Shikimate kinase (AroK)
domain: Shikimate kinase (AroK)
species: Erwinia chrysanthemi [TaxId: 556]

Probab=96.92  E-value=9.7e-05  Score=66.94  Aligned_cols=29  Identities=17%  Similarity=0.060  Sum_probs=26.9

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      .++|+||||+||||+|+.||+.++.+|+=
T Consensus         4 ~Iil~G~~GsGKSTia~~LA~~Lg~~~id   32 (170)
T d1e6ca_           4 PIFMVGARGCGMTTVGRELARALGYEFVD   32 (170)
T ss_dssp             CEEEESCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred             CEEEECCCCCCHHHHHHHHHHHhCCCEEe
Confidence            57899999999999999999999999873

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.92  E-value=0.0003  Score=60.97  Aligned_cols=69  Identities=19%  Similarity=0.235  Sum_probs=50.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--c---hhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--S---LADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--~---~~~l~~~~~~~~divInat~~  451 (616)
                      |+++|+|+|-+|+.++..|.+.|.+|++++.++++.+.+.+.. ..++  +   .+-+.+....++|.+|-+++-
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~-~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA-THAVIANATEENELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC-SEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC-CcceeeecccchhhhccCCccccEEEEEcCc
Confidence            5789999999999999999999999999999999998886543 2211  1   111222234567888877763

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.91  E-value=7.5e-05  Score=71.58  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=31.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +++|||+|+ ||+|++++..|++.|++|++++|+.+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            357899998 69999999999999999999999754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.91  E-value=0.0017  Score=58.58  Aligned_cols=76  Identities=20%  Similarity=0.197  Sum_probs=57.2

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc--c------cchhcccccCCCCccEEEEc
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--A------LSLADLENFNPEDGMILANT  448 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~--~------~~~~~l~~~~~~~~divIna  448 (616)
                      ++..|+.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++...  .      ..-.+.+  ...++|++|.+
T Consensus        17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--~~~~adivvit   94 (159)
T d2ldxa1          17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--VSANSKLVIIT   94 (159)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG--GGTTEEEEEEC
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh--hhccccEEEEe
Confidence            455689999999999999999999986  7999999999988887776421  0      1112222  23568999999


Q ss_pred             CCCCCCCC
Q 007151          449 TSIGMQPK  456 (616)
Q Consensus       449 t~~gm~p~  456 (616)
                      ++....|.
T Consensus        95 ag~~~~~~  102 (159)
T d2ldxa1          95 AGARMVSG  102 (159)
T ss_dssp             CSCCCCTT
T ss_pred             cccccCCC
Confidence            98766654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.89  E-value=0.0011  Score=60.65  Aligned_cols=71  Identities=25%  Similarity=0.345  Sum_probs=54.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhccc-------c-cCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE-------N-FNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~-------~-~~~~~~divInat  449 (616)
                      .|.+|+|+|+||+|..++..++..|+ +|++++++.+|.+ +|.+++... ++..+-.       + .....+|++|+++
T Consensus        29 ~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~  107 (176)
T d1d1ta2          29 PGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI  107 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred             CCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence            57899999999999999999999997 8999999998865 788888643 3322111       0 0234689999998


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      +.
T Consensus       108 g~  109 (176)
T d1d1ta2         108 GH  109 (176)
T ss_dssp             CC
T ss_pred             Cc
Confidence            84

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.0001  Score=68.78  Aligned_cols=69  Identities=17%  Similarity=0.149  Sum_probs=49.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc--cchh---cccccCCCCccEEEEcCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA--LSLA---DLENFNPEDGMILANTTSI  451 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~--~~~~---~l~~~~~~~~divInat~~  451 (616)
                      .||++|+|| |.+|++++..|.+.|++|+++.|++++....... +.+.  .++.   ++.+ .+.+.|+||++++.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~gD~~d~~~l~~-al~~~d~vi~~~g~   77 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-PAHVVVGDVLQAADVDK-TVAGQDAVIVLLGT   77 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC-CSEEEESCTTSHHHHHH-HHTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccc-ccccccccccchhhHHH-HhcCCCEEEEEecc
Confidence            578999997 8999999999999999999999998875432110 1111  2332   2332 34568999999875

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.88  E-value=0.00012  Score=70.44  Aligned_cols=70  Identities=19%  Similarity=0.184  Sum_probs=43.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA-RELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka-~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      |.|+|+|+ +|+|+++|..|++.|++|++++|+.++. +++.+..+......+...+ .....|++||+++.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~id~lv~~Ag~~   73 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHH-hCCCCcEEEEcCCCC
Confidence            67899998 6999999999999999999999864321 1111110000000111111 234579999998764

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.87  E-value=0.001  Score=60.71  Aligned_cols=72  Identities=19%  Similarity=0.302  Sum_probs=54.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhccc--------ccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE--------NFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~--------~~~~~~~divInat  449 (616)
                      .|.+|+|+|+||+|..++..+...|+ +|++.+++.+| .+++++++... ++....+        ......+|++|+|+
T Consensus        28 ~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r-~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~  106 (174)
T d1e3ia2          28 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK-FPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA  106 (174)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHH-HHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence            57899999999999999999999999 89999999887 57788888643 2221110        01235689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus       107 G~~  109 (174)
T d1e3ia2         107 GTA  109 (174)
T ss_dssp             CCH
T ss_pred             ccc
Confidence            853

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=96.83  E-value=0.011  Score=56.66  Aligned_cols=130  Identities=18%  Similarity=0.183  Sum_probs=77.6

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE-C----------CHHHHH----
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN-R----------TYDRAR----  418 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~n-R----------t~~ka~----  418 (616)
                      +.|.+.+++..++..       +.+++|++|+|-|.|-+|..++..|.+.|++|+.++ .          +.+...    
T Consensus        11 g~Gv~~~~~~~~~~~-------~~~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~~g~i~~~~Gld~~~l~~~~~   83 (242)
T d1v9la1          11 GFGVAVATREMAKKL-------WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKG   83 (242)
T ss_dssp             HHHHHHHHHHHHHHH-------HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred             hHHHHHHHHHHHHHc-------CCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecccccccccccccHHHHHHHhh
Confidence            577777777655431       247899999999999999999999999999876444 2          112211    


Q ss_pred             -------HHHHHH-CCccc-chhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHH-H
Q 007151          419 -------ELAETV-GGHAL-SLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLR-E  488 (616)
Q Consensus       419 -------~la~~~-~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~-~  488 (616)
                             +..... +...+ +-+++-   ..++|+++-|+.-+...   ....+  .+ +.++++.-.-+|. |+--. .
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~DIliPcA~~~~I~---~~~a~--~i-~ak~IvegAN~p~-t~~a~~~  153 (242)
T d1v9la1          84 LTGPALVELFTTKDNAEFVKNPDAIF---KLDVDIFVPAAIENVIR---GDNAG--LV-KARLVVEGANGPT-TPEAERI  153 (242)
T ss_dssp             SCHHHHHHHHHHTSCCCCCSSTTGGG---GCCCSEEEECSCSSCBC---TTTTT--TC-CCSEEECCSSSCB-CHHHHHH
T ss_pred             cchhhHHHhhhhccCceEeeCcchhc---cccccEEeecchhcccc---HHHHH--hc-ccCEEEecCCCCC-ChhHHHH
Confidence                   111111 11111 111121   23589999988654321   11111  12 3468888887785 55433 3


Q ss_pred             HHHcCCeEEccH
Q 007151          489 AEESGATIVSGL  500 (616)
Q Consensus       489 A~~~G~~~i~Gl  500 (616)
                      -+++|+.+++..
T Consensus       154 L~~rgI~~~PD~  165 (242)
T d1v9la1         154 LYERGVVVVPDI  165 (242)
T ss_dssp             HHTTTCEEECHH
T ss_pred             HHhCCeEEeCch
Confidence            356899888643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.81  E-value=0.00057  Score=62.27  Aligned_cols=113  Identities=19%  Similarity=0.243  Sum_probs=69.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc--------chhcccccCCCCccEEEEcCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL--------SLADLENFNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~--------~~~~l~~~~~~~~divInat~~gm~  454 (616)
                      ++-|||.|-||.+++..|.+.|++|+++||++++++++.+.......        +.+++.. .....+.++-..+.+..
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   81 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAA-SLKKPRKALILVQAGAA   81 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHH-HBCSSCEEEECCCCSHH
T ss_pred             EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHH-hcccceEEEEeecCcch
Confidence            58899999999999999999999999999999999999888643211        1111111 12233444444432210


Q ss_pred             CCCCCC-ccccccccCccEEEEEeeCCcc--cHHHHHHHHcCCeEEc
Q 007151          455 PKVDET-PIPKHALGHYALVFDAVYTPKI--TRLLREAEESGATIVS  498 (616)
Q Consensus       455 p~~~~~-pi~~~~l~~~~~v~Di~Y~P~~--T~ll~~A~~~G~~~i~  498 (616)
                        .+.. .-....+.+..+++|..-....  ..+.++.+++|+.+++
T Consensus        82 --~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ld  126 (178)
T d1pgja2          82 --TDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG  126 (178)
T ss_dssp             --HHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred             --hhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEec
Confidence              0000 0001235677889998875433  3444555667876543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.81  E-value=0.0023  Score=57.50  Aligned_cols=72  Identities=25%  Similarity=0.254  Sum_probs=53.8

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcc--cccCCCCccEEEEcCCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADL--ENFNPEDGMILANTTSIG  452 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l--~~~~~~~~divInat~~g  452 (616)
                      .|++|+|+|+|++|..++..+...|++++++.++.++. +++++++... ++..+-  .......+|++|++++..
T Consensus        30 ~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~  104 (168)
T d1uufa2          30 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAP  104 (168)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred             CCCEEEEeccchHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecc
Confidence            47899999999999999999999999888899988875 5677888643 332211  111345689999999853

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.77  E-value=0.0012  Score=60.88  Aligned_cols=96  Identities=18%  Similarity=0.169  Sum_probs=65.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccch-----h---------------------
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSL-----A---------------------  432 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~-----~---------------------  432 (616)
                      ....+|+|+|+|-+|..++.....+|++|++++.+.++.+++.+.++. .+.+     .                     
T Consensus        27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~-~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK-FITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE-ECCC-----------------------CCHH
T ss_pred             cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc-eEEEeccccccccccccchhhcCHHHHHHHH
Confidence            345699999999999999999999999999999998888877655432 1110     0                     


Q ss_pred             -cccccCCCCccEEEEcCCCCCCCCCCCCccccc---cccCccEEEEEee
Q 007151          433 -DLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALGHYALVFDAVY  478 (616)
Q Consensus       433 -~l~~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~~~~~v~Di~Y  478 (616)
                       .+.+ .+.++|+||.|+=+.-.+  .+..+.++   ..+++.+++|+.-
T Consensus       106 ~~l~~-~l~~aDlVI~talipG~~--aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         106 EAVLK-ELVKTDIAITTALIPGKP--APVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHH-HHTTCSEEEECCCCTTSC--CCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHH-HHHhhhhheeeeecCCcc--cceeehHHHHHhcCCCcEEEEEee
Confidence             0111 245689999887542111  11224444   3578899999975

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.74  E-value=0.0014  Score=59.39  Aligned_cols=72  Identities=19%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-ccchh------cccccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA------DLENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~-~~~~~------~l~~~~~~~~divInat~~  451 (616)
                      .|.+|+|+|+|++|.+++..+...|+ .|++++++++|.+. +++++.. .++..      .+.++....+|++|++++.
T Consensus        28 ~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          28 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred             CCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence            57899999999999999999999999 77888888887554 5677753 33221      1112123468999999885


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus       107 ~  107 (174)
T d1f8fa2         107 P  107 (174)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.74  E-value=0.00067  Score=60.64  Aligned_cols=106  Identities=20%  Similarity=0.254  Sum_probs=69.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCcc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPI  462 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi  462 (616)
                      |+-++|.|-||.+++..|.+.|.. +++||+.++++++++..+......+.+.     +.|++|-+.+..-    .....
T Consensus         2 kIg~IGlG~MG~~ma~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~----~v~~~   71 (156)
T d2cvza2           2 KVAFIGLGAMGYPMAGHLARRFPT-LVWNRTFEKALRHQEEFGSEAVPLERVA-----EARVIFTCLPTTR----EVYEV   71 (156)
T ss_dssp             CEEEECCSTTHHHHHHHHHTTSCE-EEECSSTHHHHHHHHHHCCEECCGGGGG-----GCSEEEECCSSHH----HHHHH
T ss_pred             eEEEEeHHHHHHHHHHHHHhCCCE-EEEeCCHHHHHHHHHHcCCccccccccc-----ceeEEEecccchh----hhhhh
Confidence            588999999999999999987764 5799999999999988765443333332     3577776655321    00001


Q ss_pred             cc---ccccCccEEEEEeeCCc-cc-HHHHHHHHcCCeEEc
Q 007151          463 PK---HALGHYALVFDAVYTPK-IT-RLLREAEESGATIVS  498 (616)
Q Consensus       463 ~~---~~l~~~~~v~Di~Y~P~-~T-~ll~~A~~~G~~~i~  498 (616)
                      ..   ....+..+++|...... .+ .+-+.++++|+.+++
T Consensus        72 ~~~l~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi~~ld  112 (156)
T d2cvza2          72 AEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLD  112 (156)
T ss_dssp             HHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE
T ss_pred             hccccccccccccccccccCCHHHHHHHHHHHHHcCCeEEe
Confidence            11   13456788999987543 33 334555667876653

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.73  E-value=0.0017  Score=57.72  Aligned_cols=69  Identities=19%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc--c------cchhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--A------LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~--~------~~~~~l~~~~~~~~divInat~~  451 (616)
                      ||+.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++...  .      +...+.+  ...++|+||-|++.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~--~l~~adiVVitaG~   79 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA--ALADADVVISTLGN   79 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG--GGTTCSEEEECCSC
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH--HhccccEEEEeccc
Confidence            789999999999999999999885  8999999999988877665311  0      1111222  24568999999875


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        80 ~   80 (146)
T d1hyha1          80 I   80 (146)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.72  E-value=0.00053  Score=63.65  Aligned_cols=43  Identities=28%  Similarity=0.268  Sum_probs=39.3

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAET  423 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~  423 (616)
                      -+++.|+|+|-.|.|+|..|++.|.+|+++.|+.+.++.+.+.
T Consensus         7 m~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           7 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             eceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            3689999999999999999999999999999999999888665

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.72  E-value=0.0018  Score=58.58  Aligned_cols=72  Identities=24%  Similarity=0.317  Sum_probs=53.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhccc--------ccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE--------NFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~--------~~~~~~~divInat  449 (616)
                      .|.+|+|+|+||.|..++..++..|+ +|++++++.+|.+ ++.+++... ++..+.+        ......+|++|+++
T Consensus        28 ~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~-~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~  106 (176)
T d2jhfa2          28 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI  106 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHH-HHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence            57899999999999999999999998 9999999999855 566666532 2221111        11235689999999


Q ss_pred             CCC
Q 007151          450 SIG  452 (616)
Q Consensus       450 ~~g  452 (616)
                      +..
T Consensus       107 G~~  109 (176)
T d2jhfa2         107 GRL  109 (176)
T ss_dssp             CCH
T ss_pred             Cch
Confidence            854

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.69  E-value=0.0019  Score=57.97  Aligned_cols=102  Identities=12%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      |+++|+|.|-+|.++|.+|.+.|.  +|+.++|+.+..+...+ .+.......+........+|+||-|+|+.....   
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~---   77 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFRE---   77 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCGGGGGGTCCSEEEECSCHHHHHH---
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhhhhhhhccccccccccCCchhhhh---
Confidence            479999999999999999999996  79999999887665443 332110111111111235799999999642210   


Q ss_pred             Cccc--cccccCccEEEEEeeCCcccHHHHHHH
Q 007151          460 TPIP--KHALGHYALVFDAVYTPKITRLLREAE  490 (616)
Q Consensus       460 ~pi~--~~~l~~~~~v~Di~Y~P~~T~ll~~A~  490 (616)
                       .+.  ...+.+..++.|+...  .++..+..+
T Consensus        78 -vl~~l~~~~~~~~ii~d~~s~--k~~~~~~~~  107 (171)
T d2g5ca2          78 -IAKKLSYILSEDATVTDQGSV--KGKLVYDLE  107 (171)
T ss_dssp             -HHHHHHHHSCTTCEEEECCSC--CTHHHHHHH
T ss_pred             -hhhhhhccccccccccccccc--cHHHHHHHH
Confidence             111  1235677899999864  344444444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.65  E-value=0.0019  Score=57.66  Aligned_cols=73  Identities=16%  Similarity=0.151  Sum_probs=54.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-------c-cch-hcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-------A-LSL-ADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~-------~-~~~-~~l~~~~~~~~divInat~~  451 (616)
                      .|+.|+|+|.+|.++++.|...+. ++.+++++.++++..+.++...       . +.. .+.+  ...++|++|.|++.
T Consensus         4 ~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~--~~~~advvvitag~   81 (150)
T d1t2da1           4 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYD--DLAGADVVIVTAGF   81 (150)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGG--GGTTCSEEEECCSC
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccccc--ccCCCcEEEEeccc
Confidence            589999999999999999988887 9999999998888877766421       0 110 1122  34568999999997


Q ss_pred             CCCCC
Q 007151          452 GMQPK  456 (616)
Q Consensus       452 gm~p~  456 (616)
                      ...|.
T Consensus        82 ~~~~g   86 (150)
T d1t2da1          82 TKAPG   86 (150)
T ss_dssp             SSCTT
T ss_pred             ccCCC
Confidence            76553

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.65  E-value=0.001  Score=59.61  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=55.2

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-------c-cch-hcccccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-------A-LSL-ADLENFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~-------~-~~~-~~l~~~~~~~~divInat  449 (616)
                      +.+|+.|+|+|.+|..+++.|+..|. ++++++.+.++++..+.++...       . ... .+.++ ...++|+||.|+
T Consensus         6 k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~-~~~~adiVvita   84 (154)
T d1pzga1           6 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEA-ALTGADCVIVTA   84 (154)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHH-HHTTCSEEEECC
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhh-hhcCCCeEEEec
Confidence            56899999999999999999998887 9999999988888877665320       0 000 11111 235689999999


Q ss_pred             CCCCCCC
Q 007151          450 SIGMQPK  456 (616)
Q Consensus       450 ~~gm~p~  456 (616)
                      +.+-.|.
T Consensus        85 g~~~~~g   91 (154)
T d1pzga1          85 GLTKVPG   91 (154)
T ss_dssp             SCSSCTT
T ss_pred             ccccCCC
Confidence            8765553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.63  E-value=0.0022  Score=57.70  Aligned_cols=71  Identities=23%  Similarity=0.320  Sum_probs=52.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhcc--------cccCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADL--------ENFNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l--------~~~~~~~~divInat  449 (616)
                      .|.+|+|.|+||+|..++..++..|+ +|++.+++++| .+++++++... ++..+-        .......+|++++++
T Consensus        28 ~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~  106 (176)
T d2fzwa2          28 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK-FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI  106 (176)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHH-HHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecC
Confidence            57899999999999999999999998 78888888777 46778888643 333211        111235689999998


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      +.
T Consensus       107 G~  108 (176)
T d2fzwa2         107 GN  108 (176)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.61  E-value=0.0036  Score=55.32  Aligned_cols=72  Identities=24%  Similarity=0.336  Sum_probs=53.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc--c-----c-chhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH--A-----L-SLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~--~-----~-~~~~l~~~~~~~~divInat~~  451 (616)
                      .|+.|+|+|.+|.++++.|...|.  ++.++++++++++..+.++..-  .     + .-++.+  ...++|+||.|++.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~--~~~daDvVVitaG~   79 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE--ICRDADMVVITAGP   79 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG--GGTTCSEEEECCCC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH--HhhCCcEEEEeccc
Confidence            368999999999999999999986  8999999999888776665310  0     1 112222  24568999999987


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      .-.|
T Consensus        80 ~~~~   83 (143)
T d1llda1          80 RQKP   83 (143)
T ss_dssp             CCCT
T ss_pred             ccCC
Confidence            5444

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.59  E-value=0.0015  Score=60.16  Aligned_cols=103  Identities=15%  Similarity=0.083  Sum_probs=67.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+.||++.|+|.|.+|+.++..+...|++|++++|+...         ......+++++ ....+|+|+.++|..  +. 
T Consensus        39 ~l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~---------~~~~~~~~l~e-ll~~sDiv~~~~pl~--~~-  105 (181)
T d1qp8a1          39 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE---------GPWRFTNSLEE-ALREARAAVCALPLN--KH-  105 (181)
T ss_dssp             CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC---------SSSCCBSCSHH-HHTTCSEEEECCCCS--TT-
T ss_pred             cccCceEEEeccccccccceeeeeccccccccccccccc---------cceeeeechhh-hhhccchhhcccccc--cc-
Confidence            478999999999999999999999999999999997432         11111123333 345689999999974  22 


Q ss_pred             CCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcC
Q 007151          458 DETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESG  493 (616)
Q Consensus       458 ~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G  493 (616)
                      ....+..+.   +++..+++++.-.+- ++.-+.+|-+.|
T Consensus       106 t~~li~~~~l~~mk~~ailIN~~RG~ivd~~aL~~aL~~~  145 (181)
T d1qp8a1         106 TRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKER  145 (181)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred             cccccccceeeeccccceEEeccccccccchhhhhhcccC
Confidence            122344443   467788888864433 233333444444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.59  E-value=0.0013  Score=63.33  Aligned_cols=73  Identities=21%  Similarity=0.286  Sum_probs=49.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCH---HHHHHHHHHH---CCcc----cchhcc---cc----c-CCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTY---DRARELAETV---GGHA----LSLADL---EN----F-NPE  440 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~---~ka~~la~~~---~~~~----~~~~~l---~~----~-~~~  440 (616)
                      ++++||+|+ ||+|++++..|++.|+ +|++++|+.   +.++++.+++   +...    +|+.+.   ..    . ...
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            569999997 7999999999999999 799999974   4455555544   2221    233221   11    0 123


Q ss_pred             CccEEEEcCCCCC
Q 007151          441 DGMILANTTSIGM  453 (616)
Q Consensus       441 ~~divInat~~gm  453 (616)
                      ..|.|||+++...
T Consensus        89 ~i~~vv~~ag~~~  101 (259)
T d2fr1a1          89 PLSAVFHAAATLD  101 (259)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             ccccccccccccc
Confidence            5789999998653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.001  Score=61.45  Aligned_cols=118  Identities=25%  Similarity=0.251  Sum_probs=80.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.+|++.|+|.|.+|+.++..+...|++|+.++|...+....  ..+....+++++    +.++|+|+.++|..-  .
T Consensus        40 ~~l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~~~~l~el----l~~sDiv~~~~Plt~--~  111 (184)
T d1ygya1          40 TEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIELLSLDDL----LARADFISVHLPKTP--E  111 (184)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCEECCHHHH----HHHCSEEEECCCCST--T
T ss_pred             ccccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHh--hcCceeccHHHH----HhhCCEEEEcCCCCc--h
Confidence            46789999999999999999999999999999999875543322  223333344433    335799999999742  2


Q ss_pred             CCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ..-.+..+.   +++..+++.+.-.+- +..-+.+|-+.|-..--|++++
T Consensus       112 -T~~lin~~~l~~mk~~a~lIN~sRG~iVde~aL~~aL~~~~i~~a~lDV~  161 (184)
T d1ygya1         112 -TAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVF  161 (184)
T ss_dssp             -TTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSC
T ss_pred             -hhhhhhHHHHhhhCCCceEEEecchhhhhhHHHHHHHhcCcEeEEEEeCC
Confidence             122355443   467788888877655 3555667777776555566643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0014  Score=64.45  Aligned_cols=73  Identities=16%  Similarity=0.226  Sum_probs=45.9

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeE---EEEECCHHH---HHHHHHHHCC---cc----cchhcc---c----ccCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARV---VIANRTYDR---ARELAETVGG---HA----LSLADL---E----NFNPE  440 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V---~v~nRt~~k---a~~la~~~~~---~~----~~~~~l---~----~~~~~  440 (616)
                      |.|||+|+ +|+|+++|..|++.|+++   .+..|+.++   ..+.++.+..   ..    +|+.+.   .    ....+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            56678898 699999999999999864   445665544   4444445432   11    233221   1    11235


Q ss_pred             CccEEEEcCCCCCC
Q 007151          441 DGMILANTTSIGMQ  454 (616)
Q Consensus       441 ~~divInat~~gm~  454 (616)
                      ..|++||+++.+..
T Consensus        83 ~idilvnnag~~~~   96 (285)
T d1jtva_          83 RVDVLVCNAGLGLL   96 (285)
T ss_dssp             CCSEEEECCCCCCC
T ss_pred             chhhhhhccccccc
Confidence            68999999987643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.53  E-value=0.001  Score=62.15  Aligned_cols=118  Identities=15%  Similarity=0.173  Sum_probs=75.6

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      +..+.||++.|+|.|.+|+.++..|...|++|..+++.......   .-+....+++++    +.++|+|+.++|..-. 
T Consensus        38 g~el~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~~~~l~~~----l~~sDii~~~~plt~~-  109 (197)
T d1j4aa1          38 GREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYYVDSLDDL----YKQADVISLHVPDVPA-  109 (197)
T ss_dssp             BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCBCSCHHHH----HHHCSEEEECSCCCGG-
T ss_pred             CccccCCeEEEecccccchhHHHhHhhhcccccccCcccccccc---cceeeecccccc----ccccccccccCCcccc-
Confidence            45688999999999999999999999999999999976443211   111122233322    3457999999997421 


Q ss_pred             CCCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          456 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       456 ~~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                        ..-.+..+.   ++++.+++.+.-.+- +..-+.+|-+.|-..--+++++
T Consensus       110 --T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV~  159 (197)
T d1j4aa1         110 --NVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVY  159 (197)
T ss_dssp             --GTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred             --ccccccHHHHhhhCCccEEEecCchhhhhhHHHHHHHhcccchheeeecc
Confidence              122354443   467778887776544 3444455656665444455543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.53  E-value=0.0035  Score=55.03  Aligned_cols=72  Identities=18%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc------c-cchhcccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH------A-LSLADLENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~------~-~~~~~l~~~~~~~~divInat~~gm  453 (616)
                      |+.|+|+|.+|.++++.|+..|.  ++.+++++.++++..+.++...      . ..-.+.+  ...++|++|.|++.+.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~--~~~~adivvitag~~~   79 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA--DLKGSDVVIVAAGVPQ   79 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG--GGTTCSEEEECCCCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH--HhcCCCEEEEeccccc
Confidence            68899999999999999998875  8999999999888777665311      0 1111222  2456899999998765


Q ss_pred             CCC
Q 007151          454 QPK  456 (616)
Q Consensus       454 ~p~  456 (616)
                      .|.
T Consensus        80 ~~g   82 (140)
T d1a5za1          80 KPG   82 (140)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0045  Score=56.71  Aligned_cols=37  Identities=38%  Similarity=0.512  Sum_probs=33.9

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ....|+|+|+|+|.+|.++|..|+++|++|+|+.++.
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence            3467999999999999999999999999999999964

>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: ATP sulfurylase C-terminal domain
domain: ATP sulfurylase C-terminal domain
species: Fungus (Penicillium chrysogenum) [TaxId: 5076]

Probab=96.49  E-value=0.00015  Score=64.68  Aligned_cols=29  Identities=14%  Similarity=0.051  Sum_probs=24.6

Q ss_pred             ccceecccccCCccchhchhhhhhcCcee
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      .-++|+||||+||||+|+.||+.|+.+++
T Consensus         7 ~~I~l~G~~GsGKTTia~~La~~L~~~~~   35 (183)
T d1m8pa3           7 FTIFLTGYMNSGKDAIARALQVTLNQQGG   35 (183)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHHHCS
T ss_pred             eEEEEECCCCCCHHHHHHHHHHHHhhcCC
Confidence            34788999999999999999999975543

>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]

Probab=96.49  E-value=0.00031  Score=62.41  Aligned_cols=28  Identities=11%  Similarity=0.101  Sum_probs=26.3

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|+||+||||+++.||+.++-+++
T Consensus         6 ~I~i~G~pGsGKTTia~~La~~l~~~~i   33 (173)
T d1rkba_           6 NILLTGTPGVGKTTLGKELASKSGLKYI   33 (173)
T ss_dssp             CEEEECSTTSSHHHHHHHHHHHHCCEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence            6899999999999999999999998876

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.48  E-value=0.0039  Score=57.77  Aligned_cols=71  Identities=21%  Similarity=0.234  Sum_probs=52.5

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccc-h------hccccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALS-L------ADLENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~-~------~~l~~~-~~~~~divInat~  450 (616)
                      .|.+|+|+|+|++|..++..++..|+ +|++++++++|. +++++++...+. .      +.+.+. ....+|++|++++
T Consensus        25 ~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG  103 (195)
T d1kola2          25 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG  103 (195)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhh-HhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECcc
Confidence            57899999999999999998888998 899999998876 566777764321 1      111111 2346899999987


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       104 ~  104 (195)
T d1kola2         104 F  104 (195)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.46  E-value=0.0012  Score=59.92  Aligned_cols=70  Identities=23%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhcccc-c-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLADLEN-F-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~l~~-~-~~~~~divInat~  450 (616)
                      +|++|+|.|+ |++|.+++..+...|++|+.+.+++++.+ .+++++.. .+++.+... . ....+|+++++++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccc-cccccccceeeehhhhhhhhhccccccccccccc
Confidence            5789999997 89999999999999999999899877654 45567754 334433211 0 2456899999876

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.45  E-value=0.0041  Score=54.77  Aligned_cols=72  Identities=18%  Similarity=0.193  Sum_probs=52.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC------c---ccchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG------H---ALSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~------~---~~~~~~l~~~~~~~~divInat~~  451 (616)
                      |+.|+|+|.+|.++++.|+..|.  ++.+++++.++++..+.++..      .   ...-.+.+  ...++|++|.+++.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--~~~~adiVvitag~   79 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--LLKGSEIIVVTAGL   79 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--GGTTCSEEEECCCC
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--HhccccEEEEeccc
Confidence            68899999999999999998875  899999999988776655531      0   11112222  24568999999987


Q ss_pred             CCCCC
Q 007151          452 GMQPK  456 (616)
Q Consensus       452 gm~p~  456 (616)
                      +..|.
T Consensus        80 ~~~~g   84 (142)
T d1ojua1          80 ARKPG   84 (142)
T ss_dssp             CCCSS
T ss_pred             cCCCC
Confidence            65553

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.43  E-value=0.0065  Score=49.85  Aligned_cols=42  Identities=24%  Similarity=0.172  Sum_probs=33.0

Q ss_pred             CCcEEEEEccchhHHHH-HHHHHHCCCeEEEEECCH-HHHHHHH
Q 007151          380 AGKLFVVIGAGGAGKAL-AYGAKAKGARVVIANRTY-DRARELA  421 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAi-a~~L~~~G~~V~v~nRt~-~ka~~la  421 (616)
                      +.|++.++|-||+|-+. |..|.++|++|+-.++.. +..+.+.
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~   50 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA   50 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH
Confidence            56899999999988555 888999999999999863 3334443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.41  E-value=0.0021  Score=56.80  Aligned_cols=72  Identities=19%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcc-------cchhcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHA-------LSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~-------~~~~~l~~~~~~~~divInat~~g  452 (616)
                      +|+.|+|+|.+|.++++.|...|.  ++.+++++.++++..+.++..-.       ..-.+.+  ...++|++|.|++..
T Consensus         2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~--~~~~adivvitag~~   79 (142)
T d1y6ja1           2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS--DVKDCDVIVVTAGAN   79 (142)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG--GGTTCSEEEECCCC-
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHH--HhCCCceEEEecccc
Confidence            478999999999999999999886  89999999998888877775311       0001112  245689999999876


Q ss_pred             CCC
Q 007151          453 MQP  455 (616)
Q Consensus       453 m~p  455 (616)
                      ..|
T Consensus        80 ~~~   82 (142)
T d1y6ja1          80 RKP   82 (142)
T ss_dssp             ---
T ss_pred             cCc
Confidence            544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0024  Score=59.20  Aligned_cols=39  Identities=36%  Similarity=0.405  Sum_probs=35.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      |+|.|+|||-||+.+|..++..|++|++++++++..++.
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            689999999999999999999999999999998765544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.39  E-value=0.0032  Score=57.19  Aligned_cols=72  Identities=24%  Similarity=0.286  Sum_probs=53.4

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhccc----c----cCCCCccEEEEc
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE----N----FNPEDGMILANT  448 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~----~----~~~~~~divIna  448 (616)
                      -.|.+|+|+|+||+|..++..++..|+ +|++++++.+|. +++++++... ++..+.+    +    .....+|++|++
T Consensus        26 ~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          26 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHH-HHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            357899999999999999999999998 899999998875 5567777643 3322111    0    023468999998


Q ss_pred             CCC
Q 007151          449 TSI  451 (616)
Q Consensus       449 t~~  451 (616)
                      ++.
T Consensus       105 ~g~  107 (174)
T d1p0fa2         105 AGR  107 (174)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            874

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.34  E-value=0.014  Score=53.00  Aligned_cols=129  Identities=16%  Similarity=0.170  Sum_probs=73.4

Q ss_pred             cccCCcEEEEEccch-hHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc---cch-----hcccccCCCCccEEEE
Q 007151          377 SALAGKLFVVIGAGG-AGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA---LSL-----ADLENFNPEDGMILAN  447 (616)
Q Consensus       377 ~~l~~k~vlVlGAGG-agrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~---~~~-----~~l~~~~~~~~divIn  447 (616)
                      .+++||+++|+|-+. .|+-++..|.++|+.|++++++...............   .++     +.+.+ ....+|++|.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~-~~~~aDIvIs  103 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK-CSLDSDVVIT  103 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHH-HHHHCSEEEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhh-ccccCCEEEE
Confidence            489999999999875 7999999999999999998764210000000000000   000     00111 1224799999


Q ss_pred             cCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHHHHc-CCeE-Ec-c--HHHHHHHHHHHHHHHc
Q 007151          448 TTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEES-GATI-VS-G--LEMFIGQAYEQYERFT  515 (616)
Q Consensus       448 at~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A~~~-G~~~-i~-G--l~MLv~Qa~~qf~lwt  515 (616)
                      ++|..   +   ..+..++++++.+++|+-.+...-   +.++++ .+.+ ++ |  ..||+..-+.+++.|-
T Consensus       104 avG~p---~---~~i~~d~ik~GavvIDvGi~~~~~---~~v~~~a~~iTPVPGGVTvamLl~N~v~a~~~~~  167 (171)
T d1edza1         104 GVPSE---N---YKFPTEYIKEGAVCINFACTKNFS---DDVKEKASLYVPMTGKVTIAMLLRNMLRLVRNVE  167 (171)
T ss_dssp             CCCCT---T---CCBCTTTSCTTEEEEECSSSCCBC---GGGGTTEEEEESCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC---c---cccChhhcccCceEeecccccccc---cchhheeeEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            88742   1   125567888999999996543322   112222 2211 22 2  4566666666665553

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.32  E-value=0.013  Score=47.23  Aligned_cols=33  Identities=27%  Similarity=0.298  Sum_probs=28.3

Q ss_pred             cEEEEEccchhHH-HHHHHHHHCCCeEEEEECCH
Q 007151          382 KLFVVIGAGGAGK-ALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       382 k~vlVlGAGGagr-Aia~~L~~~G~~V~v~nRt~  414 (616)
                      .|+-++|-||+|- ++|..|.++|++|+-.++..
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~   35 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEE   35 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            5789999998887 45788889999999999975

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.32  E-value=0.004  Score=56.10  Aligned_cols=71  Identities=15%  Similarity=0.246  Sum_probs=51.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCc-ccchh-----cccc-cCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGH-ALSLA-----DLEN-FNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~-~~~~~-----~l~~-~~~~~~divInat~~  451 (616)
                      .|.+|+|.|+|++|..++..+...|+ +|++++++.+|.+ ++++++.. .++..     ...+ .....+|++|++++.
T Consensus        32 ~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          32 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHH-HHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            47899999999999999999988898 8888999988755 45556643 23221     1111 123458999999985

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.004  Score=56.16  Aligned_cols=70  Identities=23%  Similarity=0.326  Sum_probs=51.4

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhc------ccc-cCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLAD------LEN-FNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~------l~~-~~~~~~divInat~  450 (616)
                      +|++|+|.|+ |++|.+++..+...|++|+++.+++++. +++.+++.. .++..+      +.+ .....+|+++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccccccccccHHHHhhhhhccCCceEEeeccc
Confidence            5789999996 9999999999999999999988988775 555677753 233221      111 12345899999876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.30  E-value=0.004  Score=56.59  Aligned_cols=70  Identities=21%  Similarity=0.284  Sum_probs=50.4

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh------cc-cccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA------DL-ENFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~------~l-~~~~~~~~divInat~  450 (616)
                      +|++|+|.|+ ||+|.+++...+..|++|+...|+.++.+. +++++... ++..      .+ .......+|+++|+++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~-~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-LKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH-HHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            5889999998 679999999999999999999999887544 45555432 2221      11 1113456899999886

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.30  E-value=0.0024  Score=59.23  Aligned_cols=120  Identities=18%  Similarity=0.146  Sum_probs=77.0

Q ss_pred             ccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          376 SSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       376 ~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      +..+.||++.|+|.|.+|+.++..+...|.+|..+++.................+++++    ...+|+|+.++|..-  
T Consensus        42 ~~~l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~l----l~~sD~v~l~~plt~--  115 (191)
T d1gdha1          42 GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSL----LSVSQFFSLNAPSTP--  115 (191)
T ss_dssp             BCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHH----HHHCSEEEECCCCCT--
T ss_pred             cceecccceEEeecccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHH----HhhCCeEEecCCCCc--
Confidence            35678999999999999999999999999999999986443322222211122233332    334799999999742  


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                      . ....+..+   .++++.+++.+.-.+. ++.-+-+|-+.|-..--++++
T Consensus       116 ~-T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g~i~~a~lDV  165 (191)
T d1gdha1         116 E-TRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDV  165 (191)
T ss_dssp             T-TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred             h-HhheecHHHhhCcCCccEEEecCCccchhhHHHHHHHHcCCceEEEEEC
Confidence            2 12234443   3467778887766544 344455666666555455554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.30  E-value=0.0013  Score=61.23  Aligned_cols=117  Identities=19%  Similarity=0.239  Sum_probs=74.5

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      ..+.||++.|+|.|.+|+.++..|...|++|..++|.....  .....+.. ..+++++    ...+|+|+.++|..-. 
T Consensus        45 ~eL~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~--~~~~~~~~~~~~l~~l----l~~sD~i~~~~plt~~-  117 (193)
T d1mx3a1          45 ARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRVSTLQDL----LFHSDCVTLHCGLNEH-  117 (193)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEECSSHHHH----HHHCSEEEECCCCCTT-
T ss_pred             eeeeCceEEEeccccccccceeeeeccccceeeccCccccc--chhhhccccccchhhc----cccCCEEEEeeccccc-
Confidence            56899999999999999999999999999999999864432  12222221 1233333    2347999999986422 


Q ss_pred             CCCCCccccc---cccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKH---ALGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~---~l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                        ..-.+..+   .++++.+++.+.-.+- ++.-+.+|-+.|-..--++++
T Consensus       118 --T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~~~i~~a~lDV  166 (193)
T d1mx3a1         118 --NHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDV  166 (193)
T ss_dssp             --CTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESC
T ss_pred             --chhhhhHHHHhccCCCCeEEecCCceEEcHHHHHHHHHcCCceEEEEEc
Confidence              11224443   3466778877776554 344444555556444445553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.29  E-value=0.0014  Score=60.35  Aligned_cols=70  Identities=14%  Similarity=0.038  Sum_probs=47.2

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchh---cccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLA---DLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~---~l~~~~~~~~divInat~~g  452 (616)
                      ++|||+|+ |.+|++++..|.+.|.  .|+...|+.++.+.+.........++.   ++.+ ...++|.||++++..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP-AFQGIDALVILTSAV   79 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHH-HHTTCSEEEECCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeecccccccc-ccccceeeEEEEeec
Confidence            68999997 8999999999999997  466678998876554322111112222   2222 245689999988654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.29  E-value=0.0019  Score=57.03  Aligned_cols=80  Identities=20%  Similarity=0.176  Sum_probs=55.5

Q ss_pred             cCCcEEEEEc-cchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          379 LAGKLFVVIG-AGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       379 l~~k~vlVlG-AGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      ..-+++.||| .|-||++++..|.+.|++|++++|+.....+..                 ....|+++.++|+.-... 
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-----------------~~~~~~v~~~~~~~~~~~-   68 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-----------------LANADVVIVSVPINLTLE-   68 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-----------------HTTCSEEEECSCGGGHHH-
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-----------------hhhccccccccchhhhee-
Confidence            3457899999 799999999999999999999999765432211                 134688888887542111 


Q ss_pred             CCCccc--cccccCccEEEEEeeC
Q 007151          458 DETPIP--KHALGHYALVFDAVYT  479 (616)
Q Consensus       458 ~~~pi~--~~~l~~~~~v~Di~Y~  479 (616)
                         .+.  ...+.+..+++|+...
T Consensus        69 ---v~~~~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          69 ---TIERLKPYLTENMLLADLTSV   89 (152)
T ss_dssp             ---HHHHHGGGCCTTSEEEECCSC
T ss_pred             ---eeecccccccCCceEEEeccc
Confidence               011  1134567889999754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.26  E-value=0.0012  Score=62.48  Aligned_cols=36  Identities=33%  Similarity=0.492  Sum_probs=32.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      +|++||+|+ +|+|+++|..|++.|++|++++|+.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            489999998 699999999999999999999998654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.23  E-value=0.0047  Score=54.21  Aligned_cols=71  Identities=20%  Similarity=0.254  Sum_probs=51.2

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCc-------c-cc-hhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGH-------A-LS-LADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~-------~-~~-~~~l~~~~~~~~divInat~~  451 (616)
                      |+.|+|||.+|.++++.|+..|.  ++.+++++.++++..+.++...       . +. -.+.+  ...++|++|.|++.
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~--~~~dadvvvitag~   79 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA--DTANSDIVIITAGL   79 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG--GGTTCSEEEECCSC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHH--HhcCCeEEEEEEec
Confidence            68899999999999999999985  8999999988877765544221       0 11 12222  24668999999986


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      .-.|
T Consensus        80 ~~~~   83 (142)
T d1guza1          80 PRKP   83 (142)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            5444

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.22  E-value=0.0037  Score=62.54  Aligned_cols=89  Identities=12%  Similarity=0.096  Sum_probs=63.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCcccch-hcccccCCCCccEEEEcCCCCCCCCC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGHALSL-ADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~~~~~~-~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      .+++.|+|+|..|+.-+.++.. ... +|.|++|+.++++++++++....... .+..+ ...++|+|+-||+.. .|. 
T Consensus       125 ~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~-a~~~aDiV~taT~s~-~P~-  201 (320)
T d1omoa_         125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAE-EASRCDVLVTTTPSR-KPV-  201 (320)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHH-HHTSSSEEEECCCCS-SCC-
T ss_pred             ccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhh-hhccccEEEEeccCc-ccc-
Confidence            4689999999999999999876 456 89999999999999998875322111 01111 234589999999853 332 


Q ss_pred             CCCccccccccCccEEEEE
Q 007151          458 DETPIPKHALGHYALVFDA  476 (616)
Q Consensus       458 ~~~pi~~~~l~~~~~v~Di  476 (616)
                          +..++++++..+.=+
T Consensus       202 ----~~~~~l~~G~hv~~i  216 (320)
T d1omoa_         202 ----VKAEWVEEGTHINAI  216 (320)
T ss_dssp             ----BCGGGCCTTCEEEEC
T ss_pred             ----cchhhcCCCCeEeec
Confidence                555678877665444

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.13  E-value=0.005  Score=54.17  Aligned_cols=72  Identities=18%  Similarity=0.190  Sum_probs=52.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc--------cc-hhcccccCCCCccEEEEcCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA--------LS-LADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~--------~~-~~~l~~~~~~~~divInat~~  451 (616)
                      +|+.|+|+|.+|.++|+.|+..+. ++.+++++.++++..+.++....        +. ..+.++  ..++|++|-|++.
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--TANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--GTTCSEEEECCSC
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--hcCCCEEEEeeec
Confidence            589999999999999999998887 99999998888887776663210        11 122222  3568999999986


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      ...|
T Consensus        80 ~~~~   83 (142)
T d1uxja1          80 PRKP   83 (142)
T ss_dssp             C---
T ss_pred             cCCc
Confidence            5444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.08  E-value=0.0021  Score=60.43  Aligned_cols=33  Identities=39%  Similarity=0.498  Sum_probs=31.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +|||+|||||.+|.++|+.|++.|.+|+|+.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            589999999999999999999999999999875

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.07  E-value=0.0022  Score=58.63  Aligned_cols=69  Identities=19%  Similarity=0.253  Sum_probs=46.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHCCcc----------cchhcccccCCCCccEEEEcCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTY--DRARELAETVGGHA----------LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~--~ka~~la~~~~~~~----------~~~~~l~~~~~~~~divInat~  450 (616)
                      ++.|+|+|.+|.++|..|++.|.+|++++|..  +..+.+.+.-....          ...+++.+ ....+|+||.++|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ad~Ii~avp   80 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEK-CLENAEVVLLGVS   80 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHH-HHTTCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHH-HHhccchhhcccc
Confidence            68999999999999999999999999999953  33444432211000          01122222 2456899999998


Q ss_pred             CC
Q 007151          451 IG  452 (616)
Q Consensus       451 ~g  452 (616)
                      ..
T Consensus        81 s~   82 (180)
T d1txga2          81 TD   82 (180)
T ss_dssp             GG
T ss_pred             hh
Confidence            53

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.06  E-value=0.0056  Score=54.79  Aligned_cols=109  Identities=14%  Similarity=0.069  Sum_probs=71.0

Q ss_pred             EEEEEccchhHHH-HHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKA-LAYGAKAKGA-RVVIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       383 ~vlVlGAGGagrA-ia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++.|+|+|++|+. .+..+.+.+. +++++++++++++++++.++...  -+++++-+   .+.|+|+.+||..++.   
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~---~~iD~V~I~tp~~~H~---   76 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQ---YGVDAVMIHAATDVHS---   76 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGG---GCCSEEEECSCGGGHH---
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcc---cccceecccccccccc---
Confidence            6899999999965 5677777654 88899999999999999987532  24444322   3579999999875432   


Q ss_pred             CCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEcc
Q 007151          459 ETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSG  499 (616)
Q Consensus       459 ~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~G  499 (616)
                        ++....++.+ .+++|  +..+..+ -.+.+.+++.|..+.-|
T Consensus        77 --~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg  119 (167)
T d1xeaa1          77 --TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVG  119 (167)
T ss_dssp             --HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred             --cccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence              1222233333 34443  1222222 45667777888876555

>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Adenosine-5'phosphosulfate kinase (APS kinase)
domain: Adenosine-5'phosphosulfate kinase (APS kinase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.00032  Score=63.76  Aligned_cols=26  Identities=12%  Similarity=-0.041  Sum_probs=23.0

Q ss_pred             cceecccccCCccchhchhhhhhcCc
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKV  566 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~  566 (616)
                      -|+|+|+||+||||+++.||+.++.+
T Consensus        21 vI~L~G~pGSGKTTiAk~La~~l~~~   46 (195)
T d1x6va3          21 TVWLTGLSGAGKTTVSMALEEYLVCH   46 (195)
T ss_dssp             EEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHhc
Confidence            47789999999999999999988654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.92  E-value=0.0043  Score=54.78  Aligned_cols=88  Identities=16%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCc
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL-AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETP  461 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l-a~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~p  461 (616)
                      |+-|||.|-||++++..|.+.|.+|++++|+.++...+ ++..+. ..+.+++    ...+|+|+-++|....     ..
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~e~----~~~~diIi~~v~~~~~-----~~   71 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV-TETSEED----VYSCPVVISAVTPGVA-----LG   71 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC-EECCHHH----HHTSSEEEECSCGGGH-----HH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc-cccHHHH----HhhcCeEEEEecCchH-----HH
Confidence            58899999999999999999999999999876555443 344332 1122222    2347999988874321     11


Q ss_pred             cccc-cccCccEEEEEeeCC
Q 007151          462 IPKH-ALGHYALVFDAVYTP  480 (616)
Q Consensus       462 i~~~-~l~~~~~v~Di~Y~P  480 (616)
                      .... .......++|+.-..
T Consensus        72 ~~~~~~~~~~~~~id~st~~   91 (152)
T d1i36a2          72 AARRAGRHVRGIYVDINNIS   91 (152)
T ss_dssp             HHHHHHTTCCSEEEECSCCC
T ss_pred             HHHhhcccCCceeeccCcCC
Confidence            1111 112246788887543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.90  E-value=0.0067  Score=55.76  Aligned_cols=118  Identities=12%  Similarity=0.033  Sum_probs=76.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC-cccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG-HALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~-~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      .++.++++.|+|.|.+|++++..|...|.+|..++|.... .......+. ...+++++    ...+|+|+.+.|..-. 
T Consensus        40 ~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~~~~~~~~~~~l~~~----l~~sD~v~~~~plt~~-  113 (188)
T d2naca1          40 YDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLP-ESVEKELNLTWHATREDM----YPVCDVVTLNCPLHPE-  113 (188)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCC-HHHHHHHTCEECSSHHHH----GGGCSEEEECSCCCTT-
T ss_pred             eeccccceeeccccccchhhhhhhhccCceEEEEeecccc-ccccccccccccCCHHHH----HHhccchhhccccccc-
Confidence            4688999999999999999999999999999999985322 112222221 11223322    3458999999997422 


Q ss_pred             CCCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHH
Q 007151          456 KVDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEM  502 (616)
Q Consensus       456 ~~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~M  502 (616)
                        ....+..+.   ++++.+++.+.-.+- +..-+.+|-+.|...--++++
T Consensus       114 --T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g~i~ga~lDV  162 (188)
T d2naca1         114 --TEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDV  162 (188)
T ss_dssp             --TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESC
T ss_pred             --chhhhHHHHHHhCCCCCEEEecCchhhhhHHHHHHHHhCCCceeEEEeC
Confidence              122355443   466778877765444 344556677777655455554

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.87  E-value=0.0051  Score=59.08  Aligned_cols=55  Identities=27%  Similarity=0.402  Sum_probs=43.9

Q ss_pred             EEecCHHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          349 GYNTDYVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       349 G~NTD~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +-|-|+..++...+..+..          .-..|+|+|||||-+|.++|+.|++.|.+|+|+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~----------~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1           8 FQENDYEEFLEIARNGLKA----------TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             GCCTTHHHHHHHHHHCSCC----------CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             cCCccHHHHHHHHhcCCCC----------CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4566788887766554432          224589999999999999999999999999999875

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.87  E-value=0.0045  Score=56.85  Aligned_cols=39  Identities=26%  Similarity=0.396  Sum_probs=35.3

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      |+|.|+|+|-||+++|..++..|++|++++++.+..++.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            679999999999999999999999999999998765554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.85  E-value=0.005  Score=56.37  Aligned_cols=70  Identities=23%  Similarity=0.244  Sum_probs=52.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchh------cccccCCCCccEEEEcCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLA------DLENFNPEDGMILANTTS  450 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~------~l~~~~~~~~divInat~  450 (616)
                      +++|||.|| ||+|.++++.++..|+ .|+.+.++.++...++.+++... ++..      .+.+.....+|+++++++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            478999996 9999999999999999 57677889999999998887643 2221      112213456899999887

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.83  E-value=0.015  Score=51.66  Aligned_cols=47  Identities=26%  Similarity=0.396  Sum_probs=40.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  427 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~  427 (616)
                      .|++|+|+|+|++|..++..++..|++|++++++++|.+ ++++++..
T Consensus        27 ~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~-~a~~~Ga~   73 (166)
T d1llua2          27 PGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLE-LARKLGAS   73 (166)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTTCS
T ss_pred             CCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHH-hhhccCcc
Confidence            478999999999999999999999999999999988864 56677653

>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=95.83  E-value=0.001  Score=61.25  Aligned_cols=29  Identities=7%  Similarity=-0.073  Sum_probs=26.4

Q ss_pred             ccceecccccCCccchhchhhhhhcCcee
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      .+++++|+||+||||+++.||+.++-+++
T Consensus         7 mrIiliG~PGSGKtT~a~~La~~~g~~~i   35 (189)
T d2ak3a1           7 LRAAIMGAPGSGKGTVSSRITKHFELKHL   35 (189)
T ss_dssp             CEEEEECCTTSSHHHHHHHHHHHBCCEEE
T ss_pred             eeEEEECCCCCCHHHHHHHHHHHHCCeEE
Confidence            47899999999999999999999987776

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.80  E-value=0.0088  Score=53.62  Aligned_cols=71  Identities=21%  Similarity=0.298  Sum_probs=52.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cchhccc----c----cCCCCccEEEEcC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSLADLE----N----FNPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~----~----~~~~~~divInat  449 (616)
                      .|.+|+|+|+||.|-.++..++..|+ +|++++++++|. +++.+++... ++..+-.    .    ......|++++++
T Consensus        28 ~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~  106 (175)
T d1cdoa2          28 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV  106 (175)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred             CCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHH-HHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeec
Confidence            57899999999999999999999998 899999998885 5567787533 3332111    0    0134689999998


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      +.
T Consensus       107 G~  108 (175)
T d1cdoa2         107 GN  108 (175)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.76  E-value=0.0026  Score=59.35  Aligned_cols=116  Identities=19%  Similarity=0.151  Sum_probs=75.4

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.||++.|+|.|.+|+.++..|...|++|+.++|...+...    ......+++++    ...+|+|+.++|..-.  
T Consensus        41 ~~l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~~~~~l~~l----~~~~D~v~~~~plt~~--  110 (199)
T d1dxya1          41 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----PDFDYVSLEDL----FKQSDVIDLHVPGIEQ--  110 (199)
T ss_dssp             CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----TTCEECCHHHH----HHHCSEEEECCCCCGG--
T ss_pred             ccccceeeeeeecccccccccccccccceeeeccCCccchhhh----cchhHHHHHHH----HHhcccceeeeccccc--
Confidence            5688999999999999999999999999999999986432100    00111233332    2347999999986421  


Q ss_pred             CCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ....+..+.   ++++.+++.+.-.+- ++.-+.+|-+.|-..--+++++
T Consensus       111 -T~~li~~~~l~~mk~~a~lIN~aRG~vvde~aL~~aL~~g~i~ga~lDV~  160 (199)
T d1dxya1         111 -NTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTY  160 (199)
T ss_dssp             -GTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSC
T ss_pred             -ccccccHHHhhccCCceEEEecccHhhhhhHHHHHHHhcCCcceEecccc
Confidence             122354443   467777777765544 3555566767776544555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.74  E-value=0.014  Score=51.45  Aligned_cols=72  Identities=18%  Similarity=0.207  Sum_probs=50.1

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCH--HHHHHHHHHHCC----cc--cc-----hhcccccCCCCccEEE
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTY--DRARELAETVGG----HA--LS-----LADLENFNPEDGMILA  446 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~--~ka~~la~~~~~----~~--~~-----~~~l~~~~~~~~divI  446 (616)
                      |+.|+|| |.+|.++++.|+..|.  ++.+++++.  ++++.++.++..    ..  ..     -++.+  ...++|+||
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~--~l~~aDvVV   79 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR--IIDESDVVI   79 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG--GGTTCSEEE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH--HhccceEEE
Confidence            6899996 9999999999999985  899999875  456655555431    10  11     11222  245689999


Q ss_pred             EcCCCCCCCC
Q 007151          447 NTTSIGMQPK  456 (616)
Q Consensus       447 nat~~gm~p~  456 (616)
                      .|++....|.
T Consensus        80 itAG~~~~~g   89 (145)
T d1hyea1          80 ITSGVPRKEG   89 (145)
T ss_dssp             ECCSCCCCTT
T ss_pred             EecccccCCC
Confidence            9998765554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.67  E-value=0.026  Score=50.18  Aligned_cols=71  Identities=20%  Similarity=0.282  Sum_probs=50.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc-cch------hccccc-CCCCccEEEEcC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA-LSL------ADLENF-NPEDGMILANTT  449 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~-~~~------~~l~~~-~~~~~divInat  449 (616)
                      .+.+++|+|+ |++|..++..+...|+ +|+++.++.+|. +++++++... ++.      +++.+. ....+|++++++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~  105 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLN  105 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhH-HHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence            4689999995 8999999999998997 999999998874 4456676532 221      111111 234589999998


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      +.
T Consensus       106 g~  107 (170)
T d1jvba2         106 NS  107 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=95.64  E-value=0.0051  Score=58.00  Aligned_cols=117  Identities=9%  Similarity=0.144  Sum_probs=71.8

Q ss_pred             cEEEEEccchhHHH-HHHHHHHC-CCe-EEEEECCHHHHHHHHHHHCCcc---cchhccccc-CCCCccEEEEcCCCCCC
Q 007151          382 KLFVVIGAGGAGKA-LAYGAKAK-GAR-VVIANRTYDRARELAETVGGHA---LSLADLENF-NPEDGMILANTTSIGMQ  454 (616)
Q Consensus       382 k~vlVlGAGGagrA-ia~~L~~~-G~~-V~v~nRt~~ka~~la~~~~~~~---~~~~~l~~~-~~~~~divInat~~gm~  454 (616)
                      =++.|+|+|.+|+. .+..+... +.+ +.|++|+.+++++++++++...   ..++++.++ ...+.|+|+-+||...+
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~~H  113 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH  113 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchhhh
Confidence            38999999999975 55566554 556 4589999999999999987532   122333331 23468999999986543


Q ss_pred             CCCCCCccccccccCc-cEEEE--EeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          455 PKVDETPIPKHALGHY-ALVFD--AVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~-~~v~D--i~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                      .     ++....++.+ .+++|  +.-++. --.+.+.|++.|..+.-|..+.
T Consensus       114 ~-----~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r  161 (221)
T d1h6da1         114 A-----EFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCH  161 (221)
T ss_dssp             H-----HHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred             h-----hHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcEEEeeccc
Confidence            2     1222334333 33333  111222 1445667777888887666644

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.64  E-value=0.0089  Score=53.86  Aligned_cols=70  Identities=19%  Similarity=0.228  Sum_probs=51.4

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchh------ccccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLA------DLENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~------~l~~~-~~~~~divInat~  450 (616)
                      +|++|||.|+ |++|.+++..+...|++++++.++.++.+ .+++++... ++..      .+.+. ....+|+++++++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc-ccccccccccccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            4789999997 99999999999999999999889988854 556676543 2221      11111 2356899999887

>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.64  E-value=0.0014  Score=59.01  Aligned_cols=28  Identities=14%  Similarity=0.037  Sum_probs=25.5

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|+||+||||+++.||+.++-+++
T Consensus         2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i   29 (182)
T d1zina1           2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI   29 (182)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHHCCCEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCcee
Confidence            5899999999999999999999977665

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.011  Score=53.03  Aligned_cols=71  Identities=21%  Similarity=0.281  Sum_probs=51.1

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc-ccchh------ccccc-CCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH-ALSLA------DLENF-NPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~-~~~~~------~l~~~-~~~~~divInat~  450 (616)
                      .|++|+|.|+ |++|.+++..++..|++|++..|+.++.+. +.+++.. .++..      ++.+. ....+|+++++.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH-HHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            4789999987 569999999988999999999999998755 4566754 33322      11111 2346899999886


Q ss_pred             C
Q 007151          451 I  451 (616)
Q Consensus       451 ~  451 (616)
                      .
T Consensus       107 ~  107 (179)
T d1qora2         107 R  107 (179)
T ss_dssp             G
T ss_pred             H
Confidence            3

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.59  E-value=0.01  Score=53.47  Aligned_cols=71  Identities=20%  Similarity=0.238  Sum_probs=51.3

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcc-----cccCCCCccEEEEcCCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADL-----ENFNPEDGMILANTTSI  451 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l-----~~~~~~~~divInat~~  451 (616)
                      ++.+|||.|| ||+|.++++..+..|++|+...|+.+|.+.+ ++++... ++.++.     .....+.+|+++++.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEeccchhchhhhcccCCCceEEEecCcH
Confidence            4567999996 8999999998889999999999998886665 4555533 333321     11123568999998763

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.56  E-value=0.0085  Score=60.33  Aligned_cols=89  Identities=12%  Similarity=0.069  Sum_probs=63.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHCCc----ccchhcccccCCCCccEEEEcCCCCC-
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA-KGA-RVVIANRTYDRARELAETVGGH----ALSLADLENFNPEDGMILANTTSIGM-  453 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~-~G~-~V~v~nRt~~ka~~la~~~~~~----~~~~~~l~~~~~~~~divInat~~gm-  453 (616)
                      -+++.|+|+|..|+.-+.++.. .+. +|.|++|++++++++++++...    ....+++++ ...++|+|+-+|+... 
T Consensus       128 a~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~e-av~~ADIi~t~Tas~s~  206 (340)
T d1x7da_         128 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAE-AVKGVDIITTVTADKAY  206 (340)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHH-HHTTCSEEEECCCCSSE
T ss_pred             CceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHH-HHhcCCceeeccccCCC
Confidence            4789999999999998888754 577 9999999999999999988542    112233333 3456899998886321 


Q ss_pred             CCCCCCCccccccccCccEEEE
Q 007151          454 QPKVDETPIPKHALGHYALVFD  475 (616)
Q Consensus       454 ~p~~~~~pi~~~~l~~~~~v~D  475 (616)
                      .|     .+..++++++..+.=
T Consensus       207 ~P-----v~~~~~l~pG~hI~a  223 (340)
T d1x7da_         207 AT-----IITPDMLEPGMHLNA  223 (340)
T ss_dssp             EE-----EECGGGCCTTCEEEE
T ss_pred             Cc-----ccchhhcCCCCEEee
Confidence            12     255567877665443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.55  E-value=0.0061  Score=56.78  Aligned_cols=33  Identities=36%  Similarity=0.356  Sum_probs=31.2

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .|+|+|||||-+|.++|+.|+++|.+|+|+.|.
T Consensus         6 ~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            478999999999999999999999999999985

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.0068  Score=54.05  Aligned_cols=113  Identities=17%  Similarity=0.063  Sum_probs=74.1

Q ss_pred             EEEEEccchhHHH-HHHHHHHC-CCe-EEEEECCHHHHHHHHHHHCCccc-chhcccccCCCCccEEEEcCCCCCCCCCC
Q 007151          383 LFVVIGAGGAGKA-LAYGAKAK-GAR-VVIANRTYDRARELAETVGGHAL-SLADLENFNPEDGMILANTTSIGMQPKVD  458 (616)
Q Consensus       383 ~vlVlGAGGagrA-ia~~L~~~-G~~-V~v~nRt~~ka~~la~~~~~~~~-~~~~l~~~~~~~~divInat~~gm~p~~~  458 (616)
                      ++.|+|+|.+|+- .+..+... +++ +.|++|+.++++++++.++.... +++++    ..+.|+|+.+||..++.   
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l----~~~~D~V~I~tp~~~h~---   75 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSL----AASCDAVFVHSSTASHF---   75 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHH----HTTCSEEEECSCTTHHH---
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccccccchhh----hhhcccccccccchhcc---
Confidence            6899999999975 56677665 555 56899999999999999876543 23333    23579999999976432   


Q ss_pred             CCccccccccCc-cEEEE--EeeCCcc-cHHHHHHHHcCCeEEccHHHHH
Q 007151          459 ETPIPKHALGHY-ALVFD--AVYTPKI-TRLLREAEESGATIVSGLEMFI  504 (616)
Q Consensus       459 ~~pi~~~~l~~~-~~v~D--i~Y~P~~-T~ll~~A~~~G~~~i~Gl~MLv  504 (616)
                        .+....++.+ .+++|  +..++.+ ..+++.|++.|..+.-|.....
T Consensus        76 --~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~  123 (164)
T d1tlta1          76 --DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRF  123 (164)
T ss_dssp             --HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGG
T ss_pred             --ccccccccccceeeccccccCCHHHHHHHHHHHHHcCCcEEEEecccc
Confidence              1222334333 45444  3333333 5566778888887776655443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.54  E-value=0.02  Score=56.75  Aligned_cols=72  Identities=17%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC----cc-----cchhccccc--CCCCccEEEE
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG----HA-----LSLADLENF--NPEDGMILAN  447 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~----~~-----~~~~~l~~~--~~~~~divIn  447 (616)
                      +||+|||+|+ |-+|..++..|.+.|++|..+.|+.++...+......    ..     .++.+...+  ...++|.+++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            5899999998 5599999999999999999999998887776543321    10     122221111  3556788888


Q ss_pred             cCCC
Q 007151          448 TTSI  451 (616)
Q Consensus       448 at~~  451 (616)
                      .+..
T Consensus        90 ~a~~   93 (342)
T d1y1pa1          90 IASV   93 (342)
T ss_dssp             CCCC
T ss_pred             hccc
Confidence            7764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.50  E-value=0.015  Score=52.90  Aligned_cols=70  Identities=20%  Similarity=0.210  Sum_probs=48.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhccc---ccCCCCccEEEEcCC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADLE---NFNPEDGMILANTTS  450 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l~---~~~~~~~divInat~  450 (616)
                      ++.++||.|| ||+|.++++.++..|++|+.+.|+.++.+.+ ++++... ++.++..   .+.....|.+||+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGASRVLPRDEFAESRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-HhhccccccccccHHHHHHHHhhcCCeeEEEcc
Confidence            3458999987 8999999999999999999999999986544 5666432 3332211   112234677777765

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.42  E-value=0.0098  Score=54.16  Aligned_cols=72  Identities=15%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcc-cchhcc-----cccCCCCccEEEEcCCC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHA-LSLADL-----ENFNPEDGMILANTTSI  451 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~-~~~~~l-----~~~~~~~~divInat~~  451 (616)
                      .+|++|||.|+ ||+|.++++.+...|++|+...++.++.+ .+.+++... ++.++.     .....+.+|+|+|+.+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~-~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHH-HHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            35789999996 89999999999999999999999888754 445666543 222211     11124568999998773

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.41  E-value=0.18  Score=47.67  Aligned_cols=131  Identities=19%  Similarity=0.182  Sum_probs=78.3

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHH-CCCeEE-EEEC----------CHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKA-KGARVV-IANR----------TYDRARELA  421 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~-~G~~V~-v~nR----------t~~ka~~la  421 (616)
                      +.|.+.+++..+... +     ..+++||+|+|-|-|.+|..++..|.+ .|++|+ +.+.          +.+...+..
T Consensus        11 g~Gv~~~~~~~~~~~-g-----~~~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~   84 (239)
T d1gtma1          11 ARGASYTIREAAKVL-G-----WDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWK   84 (239)
T ss_dssp             HHHHHHHHHHHHHHT-T-----CSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHh-C-----CCCcCCCEEEEECCCHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHH
Confidence            578887777655432 1     124899999999999999999999976 588654 4333          344444444


Q ss_pred             HHHCC-------cccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHH-HHHHHHcC
Q 007151          422 ETVGG-------HALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRL-LREAEESG  493 (616)
Q Consensus       422 ~~~~~-------~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~l-l~~A~~~G  493 (616)
                      .+.+.       ..++-+++-   ..++||++-|+--+.-.   ....  ..+ ..++++.-.-+|. |+- -+.-+++|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~i~---~~~~DIl~PcA~~~~I~---~~~a--~~i-~ak~I~e~AN~p~-t~ea~~~L~~rg  154 (239)
T d1gtma1          85 NEHGSVKDFPGATNITNEELL---ELEVDVLAPAAIEEVIT---KKNA--DNI-KAKIVAEVANGPV-TPEADEILFEKG  154 (239)
T ss_dssp             HHHSSSTTCTTSEEECHHHHH---HSCCSEEEECSCSCCBC---TTGG--GGC-CCSEEECCSSSCB-CHHHHHHHHHTT
T ss_pred             HhccccccCCCCeeecccccc---cccccEEeecccccccc---HHHH--Hhc-cccEEEecCCCCC-CHHHHHHHHHCC
Confidence            43321       111222221   23589999888755321   1111  122 3367888887775 443 23345789


Q ss_pred             CeEEccH
Q 007151          494 ATIVSGL  500 (616)
Q Consensus       494 ~~~i~Gl  500 (616)
                      +.+++..
T Consensus       155 I~~iPD~  161 (239)
T d1gtma1         155 ILQIPDF  161 (239)
T ss_dssp             CEEECHH
T ss_pred             CEEecch
Confidence            9888643

>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Atu3015-like
domain: Hypothetical protein Atu3015
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.38  E-value=0.0018  Score=57.49  Aligned_cols=28  Identities=11%  Similarity=-0.025  Sum_probs=25.9

Q ss_pred             ceecccccCCccchhchhhhhhcCceee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +++.|+||+||||+++.|++.++.+++.
T Consensus         7 I~l~G~~GsGKSTia~~La~~lg~~~~~   34 (176)
T d1zp6a1           7 LLLSGHPGSGKSTIAEALANLPGVPKVH   34 (176)
T ss_dssp             EEEEECTTSCHHHHHHHHHTCSSSCEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHhCCCEEE
Confidence            6789999999999999999999988875

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.36  E-value=0.14  Score=48.44  Aligned_cols=130  Identities=16%  Similarity=0.115  Sum_probs=77.3

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHH-HCCCeEEEEE-C----------CHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAK-AKGARVVIAN-R----------TYDRARELA  421 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~-~~G~~V~v~n-R----------t~~ka~~la  421 (616)
                      +.|.+.+++..+...       +.++++++++|-|.|-+|+.++..|. +.|++|+.++ .          +.+......
T Consensus        11 g~Gv~~~~~~~~~~~-------~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~   83 (234)
T d1b26a1          11 GRGVKVCAGLAMDVL-------GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYK   83 (234)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHc-------CCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHH
Confidence            567777777655431       24789999999999999999999997 4699766443 2          444554444


Q ss_pred             HHHCCcc-------cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHHHHH-HHcC
Q 007151          422 ETVGGHA-------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREA-EESG  493 (616)
Q Consensus       422 ~~~~~~~-------~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll~~A-~~~G  493 (616)
                      +..+...       ++-+++   ...++|+++-|+--+..   +....  ..+. ..+++.-.-+|. ||--.+. +++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~---~~~~~DI~~PcA~~~~I---~~~~a--~~l~-~~~I~e~AN~p~-t~~a~~~L~~rg  153 (234)
T d1b26a1          84 KEHGTVVTYPKGERITNEEL---LELDVDILVPAALEGAI---HAGNA--ERIK-AKAVVEGANGPT-TPEADEILSRRG  153 (234)
T ss_dssp             HHSSCSTTCSSCEEECHHHH---HTSCCSEEEECSCTTCB---CHHHH--TTCC-CSEEECCSSSCB-CHHHHHHHHHTT
T ss_pred             Hhhcceeccccceeeccccc---cccccceeecchhcccc---cHHHH--HHhh-hceEeecCCCCC-CHHHHHHHHHCC
Confidence            4433211       111222   12358999987654421   11111  1232 357777776664 5543333 5789


Q ss_pred             CeEEccH
Q 007151          494 ATIVSGL  500 (616)
Q Consensus       494 ~~~i~Gl  500 (616)
                      +.+++..
T Consensus       154 I~~~PD~  160 (234)
T d1b26a1         154 ILVVPDI  160 (234)
T ss_dssp             CEEECHH
T ss_pred             eEEechH
Confidence            9888643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.35  E-value=0.006  Score=55.00  Aligned_cols=34  Identities=21%  Similarity=0.185  Sum_probs=31.5

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      +|||+|+|||.+|..+|..|+++|+ +|+|+.|..
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            6899999999999999999999999 699999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.31  E-value=0.014  Score=51.30  Aligned_cols=70  Identities=17%  Similarity=0.236  Sum_probs=48.7

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCC-c-c------cchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGG-H-A------LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~-~-~------~~~~~l~~~~~~~~divInat~~  451 (616)
                      |+.|+|| |.+|.++++.|+..|.  ++.+++.+..+++.+  ++.. . .      +.-.+..+ ...++|+||.+++.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~~~~~~~~~~~~~~~~~~~-~~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSHIETRATVKGYLGPEQLPD-CLKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTTSSSSCEEEEEESGGGHHH-HHTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhhhhhhcCCCeEEcCCChHH-HhCCCCEEEECCCc
Confidence            7899996 9999999999999886  899999987665543  4431 1 1      11112222 24568999999886


Q ss_pred             CCCC
Q 007151          452 GMQP  455 (616)
Q Consensus       452 gm~p  455 (616)
                      ...|
T Consensus        79 ~~~~   82 (144)
T d1mlda1          79 PRKP   82 (144)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            5444

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.003  Score=59.62  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=49.3

Q ss_pred             ccCCcEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHH-HHHCCcccchhccccc--CCCCccEEEEcCCC
Q 007151          378 ALAGKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELA-ETVGGHALSLADLENF--NPEDGMILANTTSI  451 (616)
Q Consensus       378 ~l~~k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la-~~~~~~~~~~~~l~~~--~~~~~divInat~~  451 (616)
                      ..++|+|+|+|| |-+|+.++..|.+.|.  +|++++|++.+..... ..+.....++++++++  ...+.|.++++++.
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~   90 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   90 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence            456899999998 8899999999999885  8999999653311100 0000011234333332  35678999998875


Q ss_pred             C
Q 007151          452 G  452 (616)
Q Consensus       452 g  452 (616)
                      .
T Consensus        91 ~   91 (232)
T d2bkaa1          91 T   91 (232)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=95.24  E-value=0.031  Score=53.82  Aligned_cols=128  Identities=13%  Similarity=0.117  Sum_probs=76.9

Q ss_pred             HHHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEE-EC----------CHHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIA-NR----------TYDRARELAE  422 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~-nR----------t~~ka~~la~  422 (616)
                      +.|.+.+++..+...       +.++++++|+|-|.|.+|+.++..|.+.|++|+.+ +.          +.++..+...
T Consensus        16 G~Gv~~~~~~~~~~~-------~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~~G~i~~~~Gld~~~l~~~~~   88 (255)
T d1bgva1          16 GYGSVYYVEAVMKHE-------NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYML   88 (255)
T ss_dssp             HHHHHHHHHHHHHHT-------TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhC-------CCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCceEecCCCCCHHHHHHHHH
Confidence            678888887766532       25789999999999999999999999999976543 32          2233323222


Q ss_pred             HH---------------CCcccchhcccccCCCCccEEEEcCCCCCCCCCCCCccccc---ccc--CccEEEEEeeCCcc
Q 007151          423 TV---------------GGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKH---ALG--HYALVFDAVYTPKI  482 (616)
Q Consensus       423 ~~---------------~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~---~l~--~~~~v~Di~Y~P~~  482 (616)
                      +.               +...++-+++-   ..++|+++-|+--+.        +..+   .+.  ..+++++-.-+|- 
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~DiliPcA~~~~--------I~~~~a~~l~a~~ck~I~EgAN~p~-  156 (255)
T d1bgva1          89 EMRASGRNKVQDYADKFGVQFFPGEKPW---GQKVDIIMPCATQND--------VDLEQAKKIVANNVKYYIEVANMPT-  156 (255)
T ss_dssp             HHHHHCCCCTHHHHHHHTCEEEETCCGG---GSCCSEEECCSCTTC--------BCHHHHHHHHHTTCCEEECCSSSCB-
T ss_pred             HHhhhcCcchhhhhhhcCceeechhhcc---cccccEEeecccccc--------ccHHHHHhhhhcCceEEecCCCCCc-
Confidence            11               11111212221   235899997665332        2222   232  3478888887775 


Q ss_pred             cHHH-HH-HHHcCCeEEccH
Q 007151          483 TRLL-RE-AEESGATIVSGL  500 (616)
Q Consensus       483 T~ll-~~-A~~~G~~~i~Gl  500 (616)
                      |+-- +. .+++|+.+++..
T Consensus       157 t~ea~~~ll~~~gI~vvPD~  176 (255)
T d1bgva1         157 TNEALRFLMQQPNMVVAPSK  176 (255)
T ss_dssp             CHHHHHHHHHCTTCEEECHH
T ss_pred             chHHHHHHHHhcCCEEehHh
Confidence            4432 32 345788887644

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.0087  Score=54.97  Aligned_cols=116  Identities=16%  Similarity=0.134  Sum_probs=72.8

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ..+.++++.|+|.|.+|+.++..+...|++|+.++|+.....       .....++++++ ....+|+|+.+.|..-.  
T Consensus        40 ~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~~~~l~e-ll~~sDii~i~~plt~~--  109 (188)
T d1sc6a1          40 FEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-------GNATQVQHLSD-LLNMSDVVSLHVPENPS--  109 (188)
T ss_dssp             CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-------TTCEECSCHHH-HHHHCSEEEECCCSSTT--
T ss_pred             ccccceEEEEeecccchhhhhhhcccccceEeeccccccchh-------hhhhhhhhHHH-HHhhccceeecccCCcc--
Confidence            467899999999999999999999999999999998643210       01111222222 12347999998886421  


Q ss_pred             CCCCcccccc---ccCccEEEEEeeCCc-ccHHHHHHHHcCCeEEccHHHH
Q 007151          457 VDETPIPKHA---LGHYALVFDAVYTPK-ITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       457 ~~~~pi~~~~---l~~~~~v~Di~Y~P~-~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                       ....+..+.   ++++.+++.+.-.+. ++.-|.+|-+.|-..--+++++
T Consensus       110 -T~~li~~~~l~~mk~~a~lIN~aRG~lvde~aL~~aL~~~~~~~a~lDV~  159 (188)
T d1sc6a1         110 -TKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVF  159 (188)
T ss_dssp             -TTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC-
T ss_pred             -hhhhccHHHHhhCCCCCEEEEcCcHHhhhhHHHHHHHHcCCceEEEEecC
Confidence             122355443   467778887776554 3444455555554444444443

>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Probable kinase LmjF30.1890
species: Leishmania major [TaxId: 5664]

Probab=95.16  E-value=0.0025  Score=56.38  Aligned_cols=28  Identities=14%  Similarity=0.008  Sum_probs=24.6

Q ss_pred             ccceecccccCCccchhchhhhhhcCce
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVL  567 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  567 (616)
                      .++++.|+||+||||+++.||+.++-..
T Consensus         6 ~~I~i~G~~GsGKTT~~~~La~~l~~~~   33 (174)
T d1y63a_           6 INILITGTPGTGKTSMAEMIAAELDGFQ   33 (174)
T ss_dssp             CEEEEECSTTSSHHHHHHHHHHHSTTEE
T ss_pred             CEEEEEeCCCCCHHHHHHHHHHHhCCCc
Confidence            5789999999999999999999987433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.16  E-value=0.031  Score=48.91  Aligned_cols=72  Identities=22%  Similarity=0.292  Sum_probs=48.9

Q ss_pred             EEEEEc-cchhHHHHHHHHHHCCC--eEEEEEC--CHHHHHHHHHHHCC------cc-cchhcccccCCCCccEEEEcCC
Q 007151          383 LFVVIG-AGGAGKALAYGAKAKGA--RVVIANR--TYDRARELAETVGG------HA-LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlG-AGGagrAia~~L~~~G~--~V~v~nR--t~~ka~~la~~~~~------~~-~~~~~l~~~~~~~~divInat~  450 (616)
                      |+.|+| +|.+|.++++.|...|.  ++.++++  +.++++..+.++..      .. +...+.++  ..++|+||.|++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--TAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--GTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--hhhcCEEEEecc
Confidence            789999 59999999999999986  7999985  45566555544421      10 11112222  356899999988


Q ss_pred             CCCCCC
Q 007151          451 IGMQPK  456 (616)
Q Consensus       451 ~gm~p~  456 (616)
                      ..-.|.
T Consensus        80 ~~~~~g   85 (142)
T d1o6za1          80 IPRQPG   85 (142)
T ss_dssp             CCCCTT
T ss_pred             cccccC
Confidence            765543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.14  E-value=0.017  Score=52.22  Aligned_cols=108  Identities=15%  Similarity=0.214  Sum_probs=69.2

Q ss_pred             EEEEEccchhHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHHHCCcc-----cchhcccccCCCCccEEEEcCCCCCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAK-GARVV-IANRTYDRARELAETVGGHA-----LSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~-G~~V~-v~nRt~~ka~~la~~~~~~~-----~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      |+.|+|+|.+|+..+..+... +++|+ |++|+.+++++++++++...     -+++++-+  ..+.|+|+-+||...+.
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~iD~v~I~tp~~~h~   80 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLE--DPEIDALYVPLPTSLHV   80 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHH--CTTCCEEEECCCGGGHH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhh--ccccceeeecccchhhc
Confidence            689999999999999999876 45654 88999999999999886421     23444322  24589999999865431


Q ss_pred             CCCCCccccccccCcc-EEEEEeeCCcc------cHHHHHHHHcCCeEEccH
Q 007151          456 KVDETPIPKHALGHYA-LVFDAVYTPKI------TRLLREAEESGATIVSGL  500 (616)
Q Consensus       456 ~~~~~pi~~~~l~~~~-~v~Di~Y~P~~------T~ll~~A~~~G~~~i~Gl  500 (616)
                           ++....++.+. +++|   .|..      -.+++.|++.|..+.-|.
T Consensus        81 -----~~~~~~l~~g~~v~~E---KP~~~~~~e~~~l~~~~~~~~~~~~v~~  124 (184)
T d1ydwa1          81 -----EWAIKAAEKGKHILLE---KPVAMNVTEFDKIVDACEANGVQIMDGT  124 (184)
T ss_dssp             -----HHHHHHHTTTCEEEEC---SSCSSSHHHHHHHHHHHHTTTCCEEECC
T ss_pred             -----chhhhhhhccceeecc---cccccCHHHHHHHHHHHHhhCCEEEEEE
Confidence                 12222344332 3332   3332      345566666777665443

>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Bacillus globisporus [TaxId: 1459]

Probab=95.11  E-value=0.0026  Score=57.55  Aligned_cols=29  Identities=21%  Similarity=0.097  Sum_probs=26.0

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +++++|+||+||||+++.||+.++-+.+=
T Consensus         2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is   30 (182)
T d1s3ga1           2 NIVLMGLPGAGKGTQADRIVEKYGTPHIS   30 (182)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHHCCCEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCceee
Confidence            57899999999999999999999877663

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.06  E-value=0.0072  Score=53.17  Aligned_cols=37  Identities=22%  Similarity=0.421  Sum_probs=34.1

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ..++||+|||+|+|.+|..-+..|.+.|++|+|+...
T Consensus         9 ~~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999999753

>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.95  E-value=0.0031  Score=56.90  Aligned_cols=28  Identities=11%  Similarity=0.027  Sum_probs=25.8

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|.||+||||+++.||+.++-+.+
T Consensus         2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i   29 (181)
T d2cdna1           2 RVLLLGPPGAGKGTQAVKLAEKLGIPQI   29 (181)
T ss_dssp             EEEEECCTTSSHHHHHHHHHHHHTCCEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCceE
Confidence            6899999999999999999999987765

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.92  E-value=0.24  Score=48.23  Aligned_cols=136  Identities=16%  Similarity=0.134  Sum_probs=80.4

Q ss_pred             HHHHHHHHHhhhcccCCC-CCCcccccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEE-----------CCHHHHHHHH
Q 007151          354 YVGAISAIEDGLRGRLNV-SGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGARVVIAN-----------RTYDRARELA  421 (616)
Q Consensus       354 ~~G~~~~L~~~l~~~~~~-~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~n-----------Rt~~ka~~la  421 (616)
                      +.|++.+++..+...... ......+++||+|+|-|-|.+|..+|..|.+.|++|+.++           -+.+...+..
T Consensus         8 G~GV~~~~~~~l~~~~~~~~~gl~~~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~   87 (293)
T d1hwxa1           8 GRGVFHGIENFIENASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFK   87 (293)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccchhccCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHH
Confidence            577888777655321000 0001136899999999999999999999999999766543           3556655554


Q ss_pred             HHHCCcc------cchhcccccCCCCccEEEEcCCCCCCCCCCCCccccccccCccEEEEEeeCCcccHHH-HHHHHcCC
Q 007151          422 ETVGGHA------LSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLL-REAEESGA  494 (616)
Q Consensus       422 ~~~~~~~------~~~~~l~~~~~~~~divInat~~gm~p~~~~~pi~~~~l~~~~~v~Di~Y~P~~T~ll-~~A~~~G~  494 (616)
                      ...+...      .+-+++   ....+||+|-|+--+....   ...  ..+ ...++++-.-+|- |+-- +.-+++|+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~---~~~~~DIliPaA~~~~I~~---~~a--~~l-~ak~I~EgAN~P~-t~eA~~~L~~~gI  157 (293)
T d1hwxa1          88 LQHGTILGFPKAKIYEGSI---LEVDCDILIPAASEKQLTK---SNA--PRV-KAKIIAEGANGPT-TPQADKIFLERNI  157 (293)
T ss_dssp             HTTSSSTTCTTSCBCCSCG---GGCCCSEEEECSSSSCBCT---TTG--GGC-CCSEEECCSSSCB-CHHHHHHHHHTTC
T ss_pred             HHcCCeecccccccCCccc---ccCCccEEeeccccccccH---HHH--HHH-hhCEEeccCCCCC-CcchHHHHHHCCC
Confidence            4333211      111111   1235899998876543221   111  123 3467788887774 5432 23347899


Q ss_pred             eEEcc
Q 007151          495 TIVSG  499 (616)
Q Consensus       495 ~~i~G  499 (616)
                      .++++
T Consensus       158 ~viPD  162 (293)
T d1hwxa1         158 MVIPD  162 (293)
T ss_dssp             EEECH
T ss_pred             EEeCh
Confidence            88864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.90  E-value=0.016  Score=57.54  Aligned_cols=42  Identities=12%  Similarity=0.188  Sum_probs=35.7

Q ss_pred             CcEEEEEccc---hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Q 007151          381 GKLFVVIGAG---GAGKALAYGAKAKGARVVIANRTYDRARELAE  422 (616)
Q Consensus       381 ~k~vlVlGAG---GagrAia~~L~~~G~~V~v~nRt~~ka~~la~  422 (616)
                      +|.+||+|+|   |+|+++|.+|++.|++|.+..|+.........
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~   46 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKN   46 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHH
Confidence            6899999975   99999999999999999999997765554443

>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.83  E-value=0.0036  Score=56.60  Aligned_cols=31  Identities=6%  Similarity=-0.059  Sum_probs=27.0

Q ss_pred             ccceecccccCCccchhchhhhhhcCceeeh
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      .+++++|+||+||||.++.||+.++-+.+=.
T Consensus         3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~   33 (180)
T d1akya1           3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLAT   33 (180)
T ss_dssp             CEEEEECCTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred             eEEEEECCCCCCHHHHHHHHHHHhCCceEec
Confidence            4689999999999999999999998776543

>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Transcriptional regulator NadR, ribosylnicotinamide kinase domain
species: Haemophilus influenzae [TaxId: 727]

Probab=94.77  E-value=0.0031  Score=55.76  Aligned_cols=31  Identities=10%  Similarity=-0.019  Sum_probs=27.9

Q ss_pred             ccceecccccCCccchhchhhhhhcCceeeh
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      .+|+++|.||+||||+.+.||+.++-+++..
T Consensus         8 K~I~i~G~~GsGKTTla~~La~~~~~~~i~~   38 (192)
T d1lw7a2           8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWE   38 (192)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred             eEEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence            3589999999999999999999999988753

>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Atu3015-like
domain: Hypothetical protein BH3686
species: Bacillus halodurans [TaxId: 86665]

Probab=94.76  E-value=0.0036  Score=54.84  Aligned_cols=27  Identities=4%  Similarity=-0.106  Sum_probs=24.6

Q ss_pred             ceecccccCCccchhchhhhhhcCcee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++.|+||+||||+++.|++.++...+
T Consensus         5 I~i~G~~GsGKTTva~~L~~~~~~~~~   31 (176)
T d2bdta1           5 YIITGPAGVGKSTTCKRLAAQLDNSAY   31 (176)
T ss_dssp             EEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence            789999999999999999999987654

>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Maize (Zea mays) [TaxId: 4577]

Probab=94.76  E-value=0.0035  Score=57.07  Aligned_cols=28  Identities=7%  Similarity=-0.115  Sum_probs=25.7

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|+||+||||+++.||+.++-+.+
T Consensus         5 ~I~i~GppGsGKsT~a~~La~~~~~~~i   32 (189)
T d1zaka1           5 KVMISGAPASGKGTQCELIKTKYQLAHI   32 (189)
T ss_dssp             CEEEEESTTSSHHHHHHHHHHHHCCEEC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence            5889999999999999999999987765

>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Gluconate kinase
domain: Gluconate kinase
species: Escherichia coli [TaxId: 562]

Probab=94.68  E-value=0.0047  Score=54.46  Aligned_cols=31  Identities=3%  Similarity=-0.032  Sum_probs=27.7

Q ss_pred             ceecccccCCccchhchhhhhhcCceeehhh
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLVWSVW  572 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  572 (616)
                      +++.|.||+||||+++.||+.++-+++.+.+
T Consensus         9 ivl~G~~GsGKsT~a~~La~~l~~~~~~~d~   39 (171)
T d1knqa_           9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDF   39 (171)
T ss_dssp             EEEECSTTSCHHHHHHHHHHHHTCEEEEGGG
T ss_pred             EEEECCCCCCHHHHHHHHHHHhCCCeechhh
Confidence            5678999999999999999999988877665

>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Escherichia coli [TaxId: 562]

Probab=94.59  E-value=0.0043  Score=55.83  Aligned_cols=28  Identities=18%  Similarity=0.004  Sum_probs=25.0

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +++++|+||+||||.++.||+.++-+.+
T Consensus         2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i   29 (179)
T d1e4va1           2 RIILLGAPVAGKGTQAQFIMEKYGIPQI   29 (179)
T ss_dssp             EEEEEESTTSSHHHHHHHHHHHHCCCEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHhCCcee
Confidence            6789999999999999999999976654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.50  E-value=0.054  Score=47.61  Aligned_cols=47  Identities=30%  Similarity=0.455  Sum_probs=40.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCc
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGH  427 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~  427 (616)
                      .|++|+|.|+|++|..++..+...|++|+++.++.+|.+ .+++++..
T Consensus        27 ~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-~~k~~Ga~   73 (168)
T d1rjwa2          27 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELGAD   73 (168)
T ss_dssp             TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCS
T ss_pred             CCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhh-hhhhcCcc
Confidence            478999999999999999999999999999999999865 55667654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.046  Score=49.25  Aligned_cols=109  Identities=20%  Similarity=0.229  Sum_probs=69.0

Q ss_pred             EEEEEccchhHHH-HHHHHHHCC--CeE-EEEECCHHHHHHHHHHHCCcc--cchhcccccCCCCccEEEEcCCCCCCCC
Q 007151          383 LFVVIGAGGAGKA-LAYGAKAKG--ARV-VIANRTYDRARELAETVGGHA--LSLADLENFNPEDGMILANTTSIGMQPK  456 (616)
Q Consensus       383 ~vlVlGAGGagrA-ia~~L~~~G--~~V-~v~nRt~~ka~~la~~~~~~~--~~~~~l~~~~~~~~divInat~~gm~p~  456 (616)
                      ++.|+|+|.+|+. .+.++.+.+  .+| .|++|+.++++.+++.++...  -+++++-+  ..+.|+|+.+||...+. 
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~--~~~id~v~I~tp~~~h~-   81 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLE--SGLVDAVDLTLPVELNL-   81 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHH--SSCCSEEEECCCGGGHH-
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeecccc--ccccceeeccccccccc-
Confidence            7899999999986 477777754  354 489999999999999987542  34444322  24589999999865432 


Q ss_pred             CCCCccccccccCc-cEEEEEeeCCcc------cHHHHHHHHcCCeEEccHH
Q 007151          457 VDETPIPKHALGHY-ALVFDAVYTPKI------TRLLREAEESGATIVSGLE  501 (616)
Q Consensus       457 ~~~~pi~~~~l~~~-~~v~Di~Y~P~~------T~ll~~A~~~G~~~i~Gl~  501 (616)
                          .+....++.+ .+++|   .|..      -.+.+.+++.|..+.-|..
T Consensus        82 ----~~~~~al~~gk~V~~E---KPl~~~~~e~~~l~~~~~~~~~~~~v~~~  126 (181)
T d1zh8a1          82 ----PFIEKALRKGVHVICE---KPISTDVETGKKVVELSEKSEKTVYIAEN  126 (181)
T ss_dssp             ----HHHHHHHHTTCEEEEE---SSSSSSHHHHHHHHHHHHHCSSCEEEECG
T ss_pred             ----cccccccccchhhhcC---CCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence                1222334333 33333   3332      3355666677776655543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.44  E-value=0.017  Score=50.71  Aligned_cols=34  Identities=21%  Similarity=0.173  Sum_probs=31.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      |++|+|+|.+|..++..|++.|++|++++|+.++
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            7999999999999999999999999999998654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.39  E-value=0.041  Score=48.09  Aligned_cols=69  Identities=12%  Similarity=0.060  Sum_probs=51.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCC---cc-----cchhcccccCCCCccEEEEcCCC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGG---HA-----LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~---~~-----~~~~~l~~~~~~~~divInat~~  451 (616)
                      +++|+|.|..|+.++..|.+.|.+|+++..++++..+..++...   .+     .+.+-+.+....+++.+|-+++-
T Consensus         5 HiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~   81 (153)
T d1id1a_           5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcccc
Confidence            69999999999999999999999999999998877766655421   11     12222333356778999988863

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.33  E-value=0.019  Score=53.80  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=31.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .+||+|+|||.+|.++|..|++.|.+|+|+.|+.
T Consensus         4 ~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4789999999999999999999999999999853

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.31  E-value=0.018  Score=56.86  Aligned_cols=34  Identities=26%  Similarity=0.446  Sum_probs=31.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++|+++|||||-+|.++|+.|++.|.+|+|+.++
T Consensus         1 k~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~   34 (314)
T d2bi7a1           1 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQR   34 (314)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhCCCCEEEEECC
Confidence            3689999999999999999999999999999886

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.02  Score=54.04  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=30.9

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +.++|+|||||-+|.++|+.|++.|.+|+|+-++
T Consensus         4 ~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3568999999999999999999999999999764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.025  Score=44.29  Aligned_cols=42  Identities=26%  Similarity=0.239  Sum_probs=36.0

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      -++.+++|.|+ ||+|..++..+...|++|+.+.+++++.+-+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            35788999998 8999999999999999999999988876544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.019  Score=56.12  Aligned_cols=70  Identities=19%  Similarity=0.232  Sum_probs=43.4

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH-HHHHHHHHHHCCcccch---hcccccCCCCccEEEEcCCCC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY-DRARELAETVGGHALSL---ADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~-~ka~~la~~~~~~~~~~---~~l~~~~~~~~divInat~~g  452 (616)
                      |+|||+|+ |-+|+.++..|.+.|.+|+.++|.. .+.+.+-.......+++   +.+.. ...++|+||+++...
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-LYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-CCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-HHcCCCEEEECcccC
Confidence            78999998 5699999999999999999987631 11111111111111122   11222 334689999988754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.90  E-value=0.04  Score=49.30  Aligned_cols=105  Identities=15%  Similarity=0.220  Sum_probs=62.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHC-CCe-EEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCCCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK-GAR-VVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDE  459 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~-G~~-V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~~~  459 (616)
                      -|+.|+|+|.+|+..+.++.+. +++ +.|++|+.++...      .......+... ...+.|+|+.+||...+.    
T Consensus         4 irvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~------~~~~~~~~~~~-~~~~~D~Vvi~tp~~~h~----   72 (170)
T d1f06a1           4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK------TPVFDVADVDK-HADDVDVLFLCMGSATDI----   72 (170)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS------SCEEEGGGGGG-TTTTCSEEEECSCTTTHH----
T ss_pred             ceEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccccc------cccccchhhhh-hccccceEEEeCCCcccH----
Confidence            3799999999999999999876 454 6688888543211      11112223333 345689999999976532    


Q ss_pred             CccccccccCccEEEEEeeCC-----cc-cHHHHHHHHcCCeEEcc
Q 007151          460 TPIPKHALGHYALVFDAVYTP-----KI-TRLLREAEESGATIVSG  499 (616)
Q Consensus       460 ~pi~~~~l~~~~~v~Di~Y~P-----~~-T~ll~~A~~~G~~~i~G  499 (616)
                       ++....++.+.-+++. ..|     .. ..+.+.|++.|...+-|
T Consensus        73 -~~a~~aL~aG~~vv~~-~~~~~~~~~~~~~l~~~A~~~~~~~~i~  116 (170)
T d1f06a1          73 -PEQAPKFAQFACTVDT-YDNHRDIPRHRQVMNEAATAAGNVALVS  116 (170)
T ss_dssp             -HHHHHHHTTTSEEECC-CCCGGGHHHHHHHHHHHHHHHTCEEECS
T ss_pred             -HHHHHHHHCCCcEEEe-cCccccCHHHHHHHHHHHHhcCceEEEe
Confidence             2333456665544432 222     21 34445666777765544

>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]

Probab=93.89  E-value=0.0074  Score=54.73  Aligned_cols=30  Identities=7%  Similarity=-0.120  Sum_probs=26.1

Q ss_pred             ccceecccccCCccchhchhhhhhcCceee
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      .+++++|+||+||||.++.||+.++=+.+=
T Consensus         4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~   33 (190)
T d1ak2a1           4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLA   33 (190)
T ss_dssp             CEEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEECCCCCCHHHHHHHHHHHhCCeEEe
Confidence            467899999999999999999999866654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.014  Score=55.46  Aligned_cols=35  Identities=20%  Similarity=0.344  Sum_probs=32.1

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      +++++|+|+|+||.|..++..|+..|+ ++++++.+
T Consensus        28 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            567899999999999999999999999 99998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.78  E-value=0.022  Score=51.53  Aligned_cols=31  Identities=29%  Similarity=0.405  Sum_probs=28.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      +|+|||||-+|.++|+.|+++|. +|+|+.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            59999999999999999999997 79999885

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.73  E-value=0.039  Score=46.69  Aligned_cols=34  Identities=26%  Similarity=0.276  Sum_probs=31.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++|+++|+|+|.+|-.+|..|+++|.+|+++.|.
T Consensus        29 ~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          29 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECChHHHHHHHHHhhccceEEEEEEec
Confidence            4689999999999999999999999999999875

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.71  E-value=0.028  Score=55.33  Aligned_cols=41  Identities=27%  Similarity=0.167  Sum_probs=35.2

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHHHH
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRARE  419 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka~~  419 (616)
                      ++||+|||+|+ |-+|..++..|.+.|++|++++|+..+...
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~   47 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS   47 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHH
Confidence            57999999998 669999999999999999999997554333

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.53  E-value=0.041  Score=45.87  Aligned_cols=34  Identities=32%  Similarity=0.346  Sum_probs=31.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .|+++|+|+|-+|-.+|..|.++|.+|+++.|..
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            4799999999999999999999999999998853

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.50  E-value=0.034  Score=51.96  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=32.8

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      -.+|+|+|+|+|.+|.++|..|++.|.+|+|+.++.
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccceeeEeecc
Confidence            357899999999999999999999999999998754

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.39  E-value=0.05  Score=49.11  Aligned_cols=69  Identities=23%  Similarity=0.263  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCC
Q 007151          378 ALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       378 ~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~  450 (616)
                      .+++|++.|+|-|--|+|=|..|.+.|++|+|-.|...+..+.|+.-|-+..++++..    ..+|+|..-+|
T Consensus        13 ~ik~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~----~~aDiim~L~P   81 (182)
T d1np3a2          13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAV----AAADVVMILTP   81 (182)
T ss_dssp             HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHH----HTCSEEEECSC
T ss_pred             HHCCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHh----hhcCeeeeecc
Confidence            3678999999999999999999999999999999987777777777665665655432    34688887777

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.36  E-value=0.049  Score=46.02  Aligned_cols=34  Identities=24%  Similarity=0.389  Sum_probs=31.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +++++|+|+|-+|-.+|..|+++|.+|+++.|.+
T Consensus        30 ~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            5899999999999999999999999999998854

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.34  E-value=0.034  Score=48.51  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=30.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCC--eEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~  414 (616)
                      |||++|+|+|-+|-.+|..|.++|.  +|+++.+++
T Consensus         2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            7999999999999999999999885  899998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.28  E-value=0.057  Score=47.92  Aligned_cols=94  Identities=13%  Similarity=0.032  Sum_probs=57.1

Q ss_pred             cEEEEEccchhHHHH-HHHHHHCCC-e-EEEEECCHH-HHHHHHHHHCCccc--chhcccc-cCCCCccEEEEcCCCCCC
Q 007151          382 KLFVVIGAGGAGKAL-AYGAKAKGA-R-VVIANRTYD-RARELAETVGGHAL--SLADLEN-FNPEDGMILANTTSIGMQ  454 (616)
Q Consensus       382 k~vlVlGAGGagrAi-a~~L~~~G~-~-V~v~nRt~~-ka~~la~~~~~~~~--~~~~l~~-~~~~~~divInat~~gm~  454 (616)
                      -++.|+|+|++|+.. ...|..... + +.+++|+.+ +..+.++.++....  .++++.+ ....+.|+|+.+||.|.+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h   84 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH   84 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhH
Confidence            379999999999864 566655544 5 456788765 55677888775431  2333211 112458999999997743


Q ss_pred             CCCCCCccccccccCccEEEEEee
Q 007151          455 PKVDETPIPKHALGHYALVFDAVY  478 (616)
Q Consensus       455 p~~~~~pi~~~~l~~~~~v~Di~Y  478 (616)
                      ..   ........+.+..|+|..-
T Consensus        85 ~~---~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          85 VQ---NEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HH---HHHHHHHHCTTCEEEECST
T ss_pred             HH---hHHHHHHHHcCCEEEEccc
Confidence            21   0011122456677888764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.26  E-value=0.059  Score=48.36  Aligned_cols=73  Identities=12%  Similarity=0.092  Sum_probs=44.9

Q ss_pred             CcEEEEEccchhH--HHHHHHHHHC---C-CeEEEEECCHHHHHHHHHHHCC-------cc--cchhcccccCCCCccEE
Q 007151          381 GKLFVVIGAGGAG--KALAYGAKAK---G-ARVVIANRTYDRARELAETVGG-------HA--LSLADLENFNPEDGMIL  445 (616)
Q Consensus       381 ~k~vlVlGAGGag--rAia~~L~~~---G-~~V~v~nRt~~ka~~la~~~~~-------~~--~~~~~l~~~~~~~~div  445 (616)
                      .-|+.|+|||..+  .++...+...   . .+|++++.+.++++..+..+..       ..  ....+..+ ...++|+|
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~e-al~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEE-AFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHH-HHSSCSEE
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhh-ccCCCCEE
Confidence            4579999999544  4444444432   1 2899999999998865544321       10  11112222 24568999


Q ss_pred             EEcCCCCCC
Q 007151          446 ANTTSIGMQ  454 (616)
Q Consensus       446 Inat~~gm~  454 (616)
                      |+|++++-.
T Consensus        82 vitag~~~~   90 (167)
T d1u8xx1          82 MAHIRVGKY   90 (167)
T ss_dssp             EECCCTTHH
T ss_pred             EECCCcCCC
Confidence            999987643

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.24  E-value=0.044  Score=45.84  Aligned_cols=33  Identities=24%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .|+++|+|+|-+|-.+|..|+++|.+|+++.|.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~   53 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMF   53 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEECCChhhHHHHHHhhccccEEEEEeec
Confidence            378999999999999999999999999999985

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.17  E-value=0.028  Score=52.43  Aligned_cols=31  Identities=26%  Similarity=0.442  Sum_probs=29.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +|+|||||-+|.++|+.|++.|++|+|+.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            5899999999999999999999999999875

>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Thiamin phosphate synthase
family: Thiamin phosphate synthase
domain: Thiamin phosphate synthase
species: Archaeon (Pyrococcus furiosus) [TaxId: 2261]

Probab=93.08  E-value=0.86  Score=41.45  Aligned_cols=152  Identities=14%  Similarity=0.152  Sum_probs=86.6

Q ss_pred             eecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhh---HHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHH
Q 007151           29 PIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE---NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR  105 (616)
Q Consensus        29 ~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~---~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~  105 (616)
                      .||.++.....+.++++++.|+++|-+|.-.+.+.+..+   .+..+-+..+.|+|+.-+                  ++
T Consensus        10 ~ITd~~~~~~~~~v~~~l~~Gv~~vqlR~k~~~~~e~~~~a~~l~~i~~~~~~~liind~------------------~~   71 (206)
T d1xi3a_          10 VITDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVDDR------------------VD   71 (206)
T ss_dssp             EECCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTTCEEEEESC------------------HH
T ss_pred             EEeCCcccCHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCeEEechh------------------HH
Confidence            356666666677788888999999999976554321112   233344556889998522                  23


Q ss_pred             HHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEee-cC-CHh---
Q 007151          106 LAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFATT-AL-DIT---  180 (616)
Q Consensus       106 ~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~~-~~-s~~---  180 (616)
                      .|.+.+++.|=+.-+.........   ...+.-+..|.|+.      ++    +.++...|+|.+=+-.. ++ +..   
T Consensus        72 lA~~~~adGvHl~~~~~~~~~~~~---~~~~~iig~s~h~~------~e----~~~a~~~g~DYi~~gpvf~T~tk~~~~  138 (206)
T d1xi3a_          72 VALAVDADGVQLGPEDMPIEVAKE---IAPNLIIGASVYSL------EE----ALEAEKKGADYLGAGSVFPTKTKEDAR  138 (206)
T ss_dssp             HHHHHTCSEEEECTTSCCHHHHHH---HCTTSEEEEEESSH------HH----HHHHHHHTCSEEEEECSSCC----CCC
T ss_pred             HHHhccCceEeeccccccHhhhhh---cccccccccccCCH------HH----HHHHHhcCCCEEEeccccccccccccc
Confidence            456778998877543322111111   13445567788852      23    34556679998877532 21 111   


Q ss_pred             --HHHHHHHHhhcCCCCEEEEecCcchhhHhhh
Q 007151          181 --DVARVFQITVHSQVPIIGLVMGERGLISRIL  211 (616)
Q Consensus       181 --D~~~ll~~~~~~~~plI~i~MG~~G~~SRil  211 (616)
                        ....+-++.+..++|+++++==..-.+..++
T Consensus       139 ~~g~~~l~~~~~~~~~Pv~AiGGI~~~ni~~~~  171 (206)
T d1xi3a_         139 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVL  171 (206)
T ss_dssp             CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHH
T ss_pred             cccHHHHHHHHHhcCCCEEEECCCCHHHHHHHH
Confidence              3333444555568899887533334455543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.07  E-value=0.036  Score=49.91  Aligned_cols=31  Identities=19%  Similarity=0.263  Sum_probs=29.3

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      |+|||||-+|.++|+.|++.|.+|.|+.|+.
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            8999999999999999999999999999863

>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.07  E-value=0.014  Score=53.15  Aligned_cols=32  Identities=16%  Similarity=-0.063  Sum_probs=27.0

Q ss_pred             cccccceecccccCCccchhchhhhhhcCcee
Q 007151          537 FNKFHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      .+..-++++|.||+||+|.++.||+.++-+.+
T Consensus         6 ~~~~iI~l~G~pGSGKsT~a~~La~~~g~~~i   37 (194)
T d3adka_           6 KKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHL   37 (194)
T ss_dssp             HTSCEEEEEECTTSSHHHHHHHHHHHTCCEEE
T ss_pred             cCCcEEEEECCCCCCHHHHHHHHHHHhCCeeE
Confidence            44455889999999999999999999886654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.06  E-value=0.048  Score=46.10  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=31.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .|+++|+|+|-+|-.+|..|+++|++|+++.|..
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            3799999999999999999999999999998853

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.03  E-value=0.044  Score=46.07  Aligned_cols=33  Identities=24%  Similarity=0.207  Sum_probs=31.0

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .|+++|+|+|-+|-.+|..|+..|.+|+++.|.
T Consensus        22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             CCEEEEECCchHHHHHHHHHHhccccceeeehh
Confidence            479999999999999999999999999999984

>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Chloramphenicol phosphotransferase
domain: Chloramphenicol phosphotransferase
species: Streptomyces venezuelae [TaxId: 54571]

Probab=92.80  E-value=0.014  Score=51.00  Aligned_cols=28  Identities=11%  Similarity=-0.175  Sum_probs=24.6

Q ss_pred             ceecccccCCccchhchhhhhhcCceee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +++.|.||+||||+++.|++.++.++++
T Consensus         6 I~l~G~~GsGKsTva~~L~~~l~~~~~~   33 (178)
T d1qhxa_           6 IILNGGSSAGKSGIVRCLQSVLPEPWLA   33 (178)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHSSSCEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHcCCCeEE
Confidence            6677999999999999999999977643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.74  E-value=0.034  Score=54.92  Aligned_cols=38  Identities=29%  Similarity=0.315  Sum_probs=33.5

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCHHHH
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTYDRA  417 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~~ka  417 (616)
                      +.|+|+|+|| |.+|++++..|.+.|++|+++.|+..+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh
Confidence            3689999998 8899999999999999999999976543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.69  E-value=0.041  Score=51.97  Aligned_cols=31  Identities=29%  Similarity=0.344  Sum_probs=29.5

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .|+|||||-+|.++|+.|++.|.+|+|+.|.
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~   36 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENKNTALFESG   36 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            4999999999999999999999999999985

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.66  E-value=0.084  Score=47.38  Aligned_cols=71  Identities=20%  Similarity=0.191  Sum_probs=45.4

Q ss_pred             cEEEEEccchhH--HHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHCC-------cc--cchhcccccCCCCccEEE
Q 007151          382 KLFVVIGAGGAG--KALAYGAKAK----GARVVIANRTYDRARELAETVGG-------HA--LSLADLENFNPEDGMILA  446 (616)
Q Consensus       382 k~vlVlGAGGag--rAia~~L~~~----G~~V~v~nRt~~ka~~la~~~~~-------~~--~~~~~l~~~~~~~~divI  446 (616)
                      -|+.|+|||.+|  .++...+...    +.+|+++++++++++..+..+..       ..  ....|..+ .+.++|+||
T Consensus         3 mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~e-aL~dad~Vv   81 (171)
T d1obba1           3 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDD-VIIDADFVI   81 (171)
T ss_dssp             CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH-HHTTCSEEE
T ss_pred             cEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhh-cccCCCeEe
Confidence            479999999555  4455555532    24999999999998876544321       11  11123333 346689999


Q ss_pred             EcCCCCC
Q 007151          447 NTTSIGM  453 (616)
Q Consensus       447 nat~~gm  453 (616)
                      ++..+|-
T Consensus        82 ~~~~~g~   88 (171)
T d1obba1          82 NTAMVGG   88 (171)
T ss_dssp             ECCCTTH
T ss_pred             eeccccc
Confidence            9988764

>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Plasmid maintenance system epsilon/zeta, toxin zeta subunit
domain: Plasmid maintenance system epsilon/zeta, toxin zeta subunit
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.66  E-value=0.027  Score=53.12  Aligned_cols=29  Identities=14%  Similarity=-0.056  Sum_probs=26.2

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      .++|+|-||+||||+.+.||+.++.+|+.
T Consensus        34 ~ilL~GpPGtGKT~la~~la~~~~~~~~~   62 (273)
T d1gvnb_          34 AFLLGGQPGSGKTSLRSAIFEETQGNVIV   62 (273)
T ss_dssp             EEEEECCTTSCTHHHHHHHHHHTTTCCEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHhhcceEE
Confidence            47899999999999999999999888764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.061  Score=45.53  Aligned_cols=33  Identities=24%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .|+++|+|+|-+|-.+|..|+++|.+|+++.|.
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeec
Confidence            379999999999999999999999999999995

>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Uridylate kinase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.46  E-value=0.016  Score=52.61  Aligned_cols=27  Identities=15%  Similarity=-0.011  Sum_probs=23.7

Q ss_pred             ceecccccCCccchhchhhhhhcCcee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      ++++|.||+||||+++.||+.++-+.+
T Consensus        11 I~i~GppGSGKsT~a~~La~~~g~~~i   37 (196)
T d1ukza_          11 IFVLGGPGAGKGTQCEKLVKDYSFVHL   37 (196)
T ss_dssp             EEEECSTTSSHHHHHHHHHHHSSCEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHhCCeEE
Confidence            688999999999999999998875543

>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: CutC-like
family: CutC-like
domain: Copper homeostasis protein CutC
species: Shigella flexneri [TaxId: 623]

Probab=92.45  E-value=1  Score=42.47  Aligned_cols=159  Identities=19%  Similarity=0.215  Sum_probs=96.5

Q ss_pred             CCCHHHHHHHHHhhhhcCCCEEEEEecCCC-CCCh-hhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHH---HHHHH
Q 007151           32 GESVDKMVVDMGKANASGADLVEIRLDGLK-NFNP-RENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERV---DVLRL  106 (616)
Q Consensus        32 ~~~~~~~~~~l~~~~~~gaD~vElRlD~l~-~~~~-~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~---~ll~~  106 (616)
                      ..+++++.    .|.+.|||-|||+-++-. ...| ...++.+++..++|+-+=+|.+  ||.|-.++++..   +-++.
T Consensus         7 v~s~~~a~----~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~iPv~vMIRPR--~GdF~Ys~~E~~~M~~di~~   80 (247)
T d1twda_           7 CYSMECAL----TAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPR--GGDFCYSDGEFAAILEDVRT   80 (247)
T ss_dssp             ESSHHHHH----HHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSS--SSCSCCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHH----HHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHhcCCCeEEEEecC--CCCCCCCHHHHHHHHHHHHH
Confidence            34555544    456789999999987643 3333 2346677777899999999964  788888886654   44566


Q ss_pred             HHHhCCcEEEEEc-----ccchhhhHHhhccCCCCceEEEEecc-CCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCHh
Q 007151          107 AMELGADYIDVEL-----QVAREFNDSIRGKKPEKCKVIVSSHN-YQYTPSVEDLSNLVARIQASGADIVKFATTALDIT  180 (616)
Q Consensus       107 ~~~~g~dyvDIEl-----~~~~~~~~~l~~~~~~~~kiI~S~Hd-f~~tP~~~el~~~~~~~~~~gaDIvKia~~~~s~~  180 (616)
                      +.+.|++.|=+=.     ..+.+..+++... .++..+  .+|- |+.+++.   .+-++.+.++|.|=+==..-+.+..
T Consensus        81 ~k~~G~dGvV~G~L~~dg~iD~~~~~~L~~~-a~~l~v--TFHRAfD~~~d~---~~al~~Li~lG~~rILTSGg~~~a~  154 (247)
T d1twda_          81 VRELGFPGLVTGVLDVDGNVDMPRMEKIMAA-AGPLAV--TFHRAFDMCANP---LYTLNNLAELGIARVLTSGQKSDAL  154 (247)
T ss_dssp             HHHTTCSEEEECCBCTTSSBCHHHHHHHHHH-HTTSEE--EECGGGGGCSCH---HHHHHHHHHHTCCEEEECTTSSSTT
T ss_pred             HHHcCCCeEEEEEECCCCCccHHHHHHHHHH-hcccCe--eeehhhhhhCCH---HHHHHHHHhcCCCeEeccCCCCchh
Confidence            7778998875522     2234566666642 124444  5675 8888754   4556777777854333333344555


Q ss_pred             HHHHHHH-HhhcCCCCEEEEecC
Q 007151          181 DVARVFQ-ITVHSQVPIIGLVMG  202 (616)
Q Consensus       181 D~~~ll~-~~~~~~~plI~i~MG  202 (616)
                      |.+..++ +....+.++|-.+-|
T Consensus       155 ~G~~~L~~L~~~a~~~iIm~GgG  177 (247)
T d1twda_         155 QGLSKIMELIAHRDAPIIMAGAG  177 (247)
T ss_dssp             TTHHHHHHHHTSSSCCEEEEESS
T ss_pred             HHHHHHHHHHHhcCCcEEEecCC
Confidence            6555554 334344444433333

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.38  E-value=0.065  Score=45.10  Aligned_cols=34  Identities=26%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      +++++|+|+|-+|-.+|..|+++|.+|+++.|.+
T Consensus        32 ~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            4789999999999999999999999999999853

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.38  E-value=0.076  Score=44.52  Aligned_cols=33  Identities=30%  Similarity=0.247  Sum_probs=30.9

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .++++|+|+|-+|-.+|..|+++|++|+++.|.
T Consensus        22 p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          22 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCeEEEECCChHHHHHHHHHHHcCCceEEEEee
Confidence            478999999999999999999999999999874

>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: UMP/CMP kinase
species: Dictyostelium discoideum [TaxId: 44689]

Probab=92.27  E-value=0.018  Score=52.19  Aligned_cols=26  Identities=19%  Similarity=0.077  Sum_probs=22.9

Q ss_pred             cceecccccCCccchhchhhhhhcCc
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKV  566 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~  566 (616)
                      -++++|.||+||||+++.||+.++=+
T Consensus         8 iI~i~G~pGSGKsT~a~~La~~~g~~   33 (194)
T d1qf9a_           8 VVFVLGGPGSGKGTQCANIVRDFGWV   33 (194)
T ss_dssp             EEEEEESTTSSHHHHHHHHHHHHCCE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCc
Confidence            36889999999999999999988744

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=92.23  E-value=0.05  Score=51.30  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=30.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .|||||+|| |-+|+.++.+|.+.|.+|+++.|+.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            478999998 7899999999999999999999853

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.17  E-value=0.052  Score=53.94  Aligned_cols=32  Identities=31%  Similarity=0.294  Sum_probs=29.0

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |+|||+|| |-+|+.++..|.+.|.+|+.++|.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            78999997 669999999999999999999984

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.11  E-value=0.074  Score=53.21  Aligned_cols=31  Identities=35%  Similarity=0.421  Sum_probs=27.8

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN  411 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n  411 (616)
                      |+||||+|+ |-+|..++..|.+.|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            689999998 5699999999999999999986

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.03  E-value=0.064  Score=44.57  Aligned_cols=33  Identities=27%  Similarity=0.423  Sum_probs=30.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .++++|+|+|-+|-.+|..|+++|++|+++.|.
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhcccceEEEeee
Confidence            479999999999999999999999999999884

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.02  E-value=0.082  Score=45.25  Aligned_cols=34  Identities=29%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .+++++|+|+|-+|-.+|..|++.|.+|+++.|.
T Consensus        34 ~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~   67 (133)
T d1q1ra2          34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTA   67 (133)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCEEEEECCchHHHHHHHHHHhhCcceeeeeec
Confidence            3689999999999999999999999999999885

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.94  E-value=0.055  Score=51.51  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=30.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .+||||+|+ |-+|+.++.+|.+.|.+|+++.|+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            357999997 7899999999999999999999953

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.81  E-value=0.074  Score=44.87  Aligned_cols=33  Identities=21%  Similarity=0.089  Sum_probs=30.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .++++|+|+|-+|-..|..|.++|.+|+|+.|+
T Consensus        20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            368999999999999999999999999999885

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.71  E-value=0.058  Score=51.81  Aligned_cols=31  Identities=29%  Similarity=0.442  Sum_probs=28.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      +|+|||||-+|.++|+.|++.|. +|+|+.|+
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            59999999999999999999997 79999886

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.61  E-value=0.037  Score=50.62  Aligned_cols=69  Identities=16%  Similarity=0.043  Sum_probs=43.1

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGA--RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~--~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .|+++|+|| |-+|+.++..|.+.|.  +|...+|+.....   ..+.....++.++.+......|.+|++.+..
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---ccccccccchhhhhhccccchheeeeeeeee
Confidence            389999998 8899999999999997  6777777532100   0001111233322221334579999987643

>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Polynucleotide kinase, kinase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=91.58  E-value=0.025  Score=48.55  Aligned_cols=29  Identities=10%  Similarity=-0.091  Sum_probs=22.1

Q ss_pred             ceecccccCCccchhchhhhhhcCceeeh
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      +++.|+||+||||+.+.|.+......+.+
T Consensus         5 Iii~G~pGsGKTTla~~L~~~~~~~~~~~   33 (152)
T d1ly1a_           5 ILTIGCPGSGKSTWAREFIAKNPGFYNIN   33 (152)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHSTTEEEEC
T ss_pred             EEEECCCCCCHHHHHHHHHHhCCCCEEec
Confidence            67899999999999998876554444433

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=91.57  E-value=0.14  Score=47.89  Aligned_cols=48  Identities=23%  Similarity=0.245  Sum_probs=40.0

Q ss_pred             HHHHHHHHhhhcccCCCCCCcccccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          355 VGAISAIEDGLRGRLNVSGGVSSALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       355 ~G~~~~L~~~l~~~~~~~~~~~~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      .|++++++-.           +.++++.++++.|||.+|-+++..+.+.|. ++++++|.
T Consensus        11 Agll~a~~~~-----------g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          11 AAFLNALKLT-----------EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHHHHHHH-----------TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHHHHHHHh-----------CCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            4666776531           246889999999999999999999999998 99999984

>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Replication factor C1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.56  E-value=0.019  Score=53.96  Aligned_cols=29  Identities=14%  Similarity=0.115  Sum_probs=26.6

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +.+++|=||+||||+.+.+|+.++..+.+
T Consensus        54 ~lll~GPpG~GKTt~a~~la~~~~~~~~~   82 (253)
T d1sxja2          54 AAMLYGPPGIGKTTAAHLVAQELGYDILE   82 (253)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHTTCEEEE
T ss_pred             eEEEECCCCCCHHHHHHHHHHHHHhhhhc
Confidence            58899999999999999999999988765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.45  E-value=0.16  Score=49.66  Aligned_cols=72  Identities=19%  Similarity=0.246  Sum_probs=44.6

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC----HHHHHHHHHHHCCc----ccchhccc---cc-CCCCccEEEEc
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT----YDRARELAETVGGH----ALSLADLE---NF-NPEDGMILANT  448 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt----~~ka~~la~~~~~~----~~~~~~l~---~~-~~~~~divIna  448 (616)
                      |.|||+|| |-+|+.++..|.+.|++|++++|-    .+............    ..++.+.+   .+ ...++|+||++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            67999998 669999999999999999998751    12222222222211    12333222   11 12358999998


Q ss_pred             CCCCC
Q 007151          449 TSIGM  453 (616)
Q Consensus       449 t~~gm  453 (616)
                      +....
T Consensus        82 Aa~~~   86 (347)
T d1z45a2          82 AGLKA   86 (347)
T ss_dssp             CSCCC
T ss_pred             ccccc
Confidence            87643

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=91.42  E-value=0.12  Score=48.46  Aligned_cols=70  Identities=13%  Similarity=0.068  Sum_probs=49.9

Q ss_pred             cEEEEEccch----hHHHHHHHHHHC--CCeEE-EEECCHHHHHHHHHHHCCcc----cchhcccccCCCCccEEEEcCC
Q 007151          382 KLFVVIGAGG----AGKALAYGAKAK--GARVV-IANRTYDRARELAETVGGHA----LSLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       382 k~vlVlGAGG----agrAia~~L~~~--G~~V~-v~nRt~~ka~~la~~~~~~~----~~~~~l~~~~~~~~divInat~  450 (616)
                      =++.|+|+|+    +++.-+.++.+.  +++|+ |++|+.+++++++++++...    -+++++-+  ..+.|+|+.+||
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~iD~V~i~tp   94 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQ--YKDIDMIVVSVK   94 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHH--CTTCSEEEECSC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhccc--ccccceeeccCC
Confidence            4799999986    556666667664  45655 89999999999999987532    23444322  246899999998


Q ss_pred             CCC
Q 007151          451 IGM  453 (616)
Q Consensus       451 ~gm  453 (616)
                      ...
T Consensus        95 ~~~   97 (237)
T d2nvwa1          95 VPE   97 (237)
T ss_dssp             HHH
T ss_pred             Ccc
Confidence            653

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.38  E-value=0.091  Score=48.94  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC-eEEEEECCH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA-RVVIANRTY  414 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~  414 (616)
                      +|+|+|||.+|.++|..|++.|. +|.|+.|+.
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            69999999999999999999997 999999864

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.29  E-value=0.15  Score=44.50  Aligned_cols=71  Identities=18%  Similarity=0.199  Sum_probs=46.2

Q ss_pred             EEEEEc-cchhHHHHHHHHH-HCCC--eEEEEECCHHHHHHHHHHHCCcc--c------chhcccccCCCCccEEEEcCC
Q 007151          383 LFVVIG-AGGAGKALAYGAK-AKGA--RVVIANRTYDRARELAETVGGHA--L------SLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlG-AGGagrAia~~L~-~~G~--~V~v~nRt~~ka~~la~~~~~~~--~------~~~~l~~~~~~~~divInat~  450 (616)
                      |+.|+| +|.+|.++++.|+ +.+.  ++.+++..+ +++..+-++..-.  .      ...+.+  ...++|+||.|++
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~--~~~~aDvvvitaG   78 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP--ALEGADVVLISAG   78 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH--HHTTCSEEEECCS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc--ccCCCCEEEECCC
Confidence            689999 5999999999986 4453  899999864 5555555553211  0      011111  2346899999998


Q ss_pred             CCCCCC
Q 007151          451 IGMQPK  456 (616)
Q Consensus       451 ~gm~p~  456 (616)
                      ..-.|.
T Consensus        79 ~~~k~g   84 (145)
T d2cmda1          79 VRRKPG   84 (145)
T ss_dssp             CCCCTT
T ss_pred             ccCCCC
Confidence            754443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.25  E-value=0.094  Score=50.56  Aligned_cols=33  Identities=30%  Similarity=0.182  Sum_probs=29.8

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECCH
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      |+|||+|+ |-+|+.++..|.+.|++|+.++|..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            68999998 6799999999999999999998853

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.22  E-value=0.25  Score=45.29  Aligned_cols=73  Identities=21%  Similarity=0.253  Sum_probs=45.7

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIG  452 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~g  452 (616)
                      .++.||+||=+|+|-=.  ++..++..|+ +|+-++.+++..+...+......+...|+.+ ..+.+|+||.+-|-|
T Consensus        45 ~dl~Gk~VLDlGcGtG~--l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~-l~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI--LACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFG  118 (197)
T ss_dssp             TSSBTSEEEEETCTTCH--HHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC-
T ss_pred             CCCCCCEEEEeCCCCcH--HHHHHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhh-cCCcceEEEeCcccc
Confidence            36889999999998212  2345677888 8999999977655443333221112223333 235699999877755

>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Archaeon Methanococcus voltae [TaxId: 2188]

Probab=91.22  E-value=0.021  Score=50.26  Aligned_cols=24  Identities=13%  Similarity=0.072  Sum_probs=21.4

Q ss_pred             ceecccccCCccchhchhhhhhcC
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGK  565 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~  565 (616)
                      +++.|+||+||||+.+.|++.++.
T Consensus         4 I~i~G~~GsGKsT~~~~L~~~l~~   27 (190)
T d1khta_           4 VVVTGVPGVGSTTSSQLAMDNLRK   27 (190)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHH
Confidence            677899999999999999998764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.05  E-value=0.081  Score=51.87  Aligned_cols=33  Identities=30%  Similarity=0.369  Sum_probs=29.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCC--eEEEEECCH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGA--RVVIANRTY  414 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt~  414 (616)
                      |+|+|||||.+|.++|..|++.|.  +|+|+.|+.
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            789999999999999999988774  899999974

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.03  E-value=0.08  Score=43.50  Aligned_cols=37  Identities=11%  Similarity=0.202  Sum_probs=31.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .+++||+|+|+|+|-.|.-++..|+..+.++++..|.
T Consensus        28 ~~f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r   64 (107)
T d2gv8a2          28 ELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLL   64 (107)
T ss_dssp             GGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECT
T ss_pred             hhcCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEec
Confidence            5689999999999999999999999887776666554

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.00  E-value=0.053  Score=51.66  Aligned_cols=33  Identities=30%  Similarity=0.341  Sum_probs=30.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      +|+|+|+|.+|.++|..|++.|.+|.|+.|.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            699999999999999999999999999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.98  E-value=0.13  Score=42.72  Aligned_cols=35  Identities=29%  Similarity=0.335  Sum_probs=32.1

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .+|+++|+|+|-+|-.+|..|+..|.+|+++.|.+
T Consensus        21 ~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcchhheEeeccc
Confidence            47899999999999999999999999999998853

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.97  E-value=0.064  Score=49.24  Aligned_cols=33  Identities=12%  Similarity=0.053  Sum_probs=29.6

Q ss_pred             cEEEEEccchhHHHHHHHHHHCC-------CeEEEEECCH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKG-------ARVVIANRTY  414 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G-------~~V~v~nRt~  414 (616)
                      .+|+|||||.+|.++|+.|+++|       ++|+|+.+.+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            58999999999999999999988       4799998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.92  E-value=0.073  Score=44.91  Aligned_cols=34  Identities=29%  Similarity=0.290  Sum_probs=31.5

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      .++++|+|+|-+|-.+|..|+++|.+|+++.|+.
T Consensus        25 p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4799999999999999999999999999998853

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.06  Score=55.54  Aligned_cols=34  Identities=29%  Similarity=0.392  Sum_probs=31.2

Q ss_pred             cCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEEC
Q 007151          379 LAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANR  412 (616)
Q Consensus       379 l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nR  412 (616)
                      +++.+|+|+|+||+|-.++..|+..|+ +++|++.
T Consensus        35 l~~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          35 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HHHCCEEEECSSTTHHHHHHHHHTTTCCCEEEECC
T ss_pred             HhcCeEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence            457799999999999999999999999 9999875

>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: 5' polynucleotide kinase-3' phosphatase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.78  E-value=0.032  Score=50.12  Aligned_cols=27  Identities=15%  Similarity=-0.033  Sum_probs=22.9

Q ss_pred             ceecccccCCccchhchhhhhhcCcee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      ++++|+||+||||+.+.+++.++-..+
T Consensus        17 iil~G~pGsGKST~a~~l~~~~~~~~i   43 (172)
T d1yj5a2          17 VVAVGFPGAGKSTFIQEHLVSAGYVHV   43 (172)
T ss_dssp             EEEECCTTSSHHHHHHHHTGGGTCEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHhcCCEEE
Confidence            678999999999999999887775554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.77  E-value=0.14  Score=44.85  Aligned_cols=74  Identities=15%  Similarity=0.096  Sum_probs=48.7

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCC---------eEEEEECCHHHHHHHHHHHCCcc------cc-hhcccccCCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGA---------RVVIANRTYDRARELAETVGGHA------LS-LADLENFNPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~---------~V~v~nRt~~ka~~la~~~~~~~------~~-~~~l~~~~~~~~di  444 (616)
                      -||.|+|| |.+|.++++.|+..+.         ++...+++.++++.++.++....      .. ..+..+ ...++|+
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~adv   83 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV-AFKDADY   83 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-HTTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh-hcccccE
Confidence            38999997 9999999999987652         23334567788887776654321      00 011111 3567899


Q ss_pred             EEEcCCCCCCCC
Q 007151          445 LANTTSIGMQPK  456 (616)
Q Consensus       445 vInat~~gm~p~  456 (616)
                      +|.+++....|.
T Consensus        84 ViitaG~~~~pg   95 (154)
T d1y7ta1          84 ALLVGAAPRKAG   95 (154)
T ss_dssp             EEECCCCCCCTT
T ss_pred             EEeecCcCCCCC
Confidence            999998765543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.76  E-value=0.098  Score=50.03  Aligned_cols=30  Identities=33%  Similarity=0.405  Sum_probs=28.3

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |+|||||-+|.++|+.|++.|.+|+|+.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence            799999999999999999999999999874

>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: CMP kinase
species: Escherichia coli [TaxId: 562]

Probab=90.74  E-value=0.032  Score=50.94  Aligned_cols=28  Identities=14%  Similarity=-0.184  Sum_probs=24.2

Q ss_pred             ceecccccCCccchhchhhhhhcCceee
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      |++.|+||+||+|.++.||+.++-+++=
T Consensus         6 I~I~GppGSGKgT~ak~La~~~gl~~iS   33 (225)
T d1ckea_           6 ITIDGPSGAGKGTLCKAMAEALQWHLLD   33 (225)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred             EEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence            3455999999999999999999988763

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.71  E-value=0.16  Score=47.51  Aligned_cols=32  Identities=22%  Similarity=0.369  Sum_probs=29.1

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .||||+|| |-+|+.++.+|.+.|++|+.++|.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            36999998 789999999999999999999985

>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Deoxyribose-phosphate aldolase DeoC
species: Thermus thermophilus [TaxId: 274]

Probab=90.68  E-value=1.6  Score=40.10  Aligned_cols=143  Identities=21%  Similarity=0.231  Sum_probs=93.6

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 007151           33 ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGA  112 (616)
Q Consensus        33 ~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~  112 (616)
                      .|.+++..-.+++.+.++..|=++-.+.      +..+..++.++. -+.|+=.-+.|..   +.+.+..-.+.+++.|+
T Consensus        15 ~T~~~i~~lc~~A~~~~~~aVcV~P~~v------~~a~~~l~~s~v-~v~~VigFP~G~~---~~~~k~~e~~~ai~~GA   84 (211)
T d1ub3a_          15 ATLEEVAKAAEEALEYGFYGLCIPPSYV------AWVRARYPHAPF-RLVTVVGFPLGYQ---EKEVKALEAALACARGA   84 (211)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEECCGGGH------HHHHHHCTTCSS-EEEEEESTTTCCS---CHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHhCCeEEEECHHHH------HHHHHHccCCCC-ceEEEEecccccC---cHHHHHHHHHHHHHcCC
Confidence            4577787778888888777654433222      123333343343 4556656566654   45677777889999999


Q ss_pred             cEEEEEcccc----------hhhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEe----ecC
Q 007151          113 DYIDVELQVA----------REFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFAT----TAL  177 (616)
Q Consensus       113 dyvDIEl~~~----------~~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~----~~~  177 (616)
                      +-||+=++..          .+.++.+.. .+....|+|+-.+..    +.+++....+-+.+.|||.+|--+    ...
T Consensus        85 ~EiD~V~n~~~~~~g~~~~v~~ei~~v~~~~~~~~lKVIlEt~~L----~~~ei~~a~~~a~~aGadfiKTSTG~~~~ga  160 (211)
T d1ub3a_          85 DEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYF----SPEEIARLAEAAIRGGADFLKTSTGFGPRGA  160 (211)
T ss_dssp             SEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS----CHHHHHHHHHHHHHHTCSEEECCCSSSSCCC
T ss_pred             CeEEEeeccchhhcCCHHHHHHHHHHHHHhccCCceEEEeccccC----CHHHHHHHHHHHHHhccceEEecCCCCCCCC
Confidence            9999976542          112233333 233456899877655    457888888889999999999954    335


Q ss_pred             CHhHHHHHHHHh
Q 007151          178 DITDVARVFQIT  189 (616)
Q Consensus       178 s~~D~~~ll~~~  189 (616)
                      +++|+..+.+..
T Consensus       161 t~e~v~~m~~~~  172 (211)
T d1ub3a_         161 SLEDVALLVRVA  172 (211)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh
Confidence            888887666654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.56  E-value=0.095  Score=49.56  Aligned_cols=31  Identities=26%  Similarity=0.514  Sum_probs=28.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -|+|||+|-+|.++|+.|+++|.+|+|+.|.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3899999999999999999999999999874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.54  E-value=0.16  Score=49.69  Aligned_cols=30  Identities=23%  Similarity=0.324  Sum_probs=27.5

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      ||||+|+ |-+|+.++..|.+.|++|++++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            6999998 56999999999999999999876

>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain
domain: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.53  E-value=0.025  Score=51.16  Aligned_cols=23  Identities=13%  Similarity=-0.015  Sum_probs=20.7

Q ss_pred             ceecccccCCccchhchhhhhhc
Q 007151          542 IFTYFLFSFGNFSAEGTISENHG  564 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~  564 (616)
                      ++++|+||+||||+.+.|++.++
T Consensus         5 i~l~GlpgsGKSTla~~L~~~l~   27 (213)
T d1bifa1           5 IVMVGLPARGKTYISKKLTRYLN   27 (213)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHH
Confidence            56899999999999999998775

>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: KguE-like
domain: Hypothetical protein PA2260
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.51  E-value=0.52  Score=43.90  Aligned_cols=76  Identities=25%  Similarity=0.273  Sum_probs=49.7

Q ss_pred             HHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEec--cCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEEc
Q 007151           42 MGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYR--PIWEGGQYDGDENERVDVLRLAMELGADYIDVEL  119 (616)
Q Consensus        42 l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~R--t~~eGG~~~~~~e~~~~ll~~~~~~g~dyvDIEl  119 (616)
                      ++.+.+.|+|.||+|-+++......+.++.+.+..++++....-  ...+.+..   .++..+.++.|..+|+.+|-+..
T Consensus        25 l~~~a~~G~dgIEi~~~~~~~~~~~~~l~~~~~~~GL~i~~~~~~~~~~~~~~~---~~~~~~~i~~A~~LG~~~v~~~~  101 (250)
T d1yx1a1          25 LPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQL---NPELEPTLRRAEACGAGWLKVSL  101 (250)
T ss_dssp             HHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEEEEEEEEEECTTSSB---CTTHHHHHHHHHHTTCSEEEEEE
T ss_pred             HHHHHHhCCCEEEEecccCCCcchHHHHHHHHHHcCCEEEEecccccccCchhh---HHHHHHHHHHHHHhCCCEEEEee
Confidence            34455689999999999887655456677777788888754322  11222221   23445677888888988886644


Q ss_pred             c
Q 007151          120 Q  120 (616)
Q Consensus       120 ~  120 (616)
                      .
T Consensus       102 g  102 (250)
T d1yx1a1         102 G  102 (250)
T ss_dssp             E
T ss_pred             c
Confidence            3

>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Adenylate kinase
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=90.47  E-value=0.027  Score=49.80  Aligned_cols=25  Identities=8%  Similarity=-0.072  Sum_probs=21.5

Q ss_pred             ceecccccCCccchhchhhhhhcCc
Q 007151          542 IFTYFLFSFGNFSAEGTISENHGKV  566 (616)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~~  566 (616)
                      +++.|+||+||||+.+.||+.++..
T Consensus         4 ivi~G~~GsGKTT~~~~La~~L~~~   28 (194)
T d1nksa_           4 GIVTGIPGVGKSTVLAKVKEILDNQ   28 (194)
T ss_dssp             EEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHc
Confidence            3567999999999999999998653

>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Holliday junction helicase RuvB
species: Thermus thermophilus [TaxId: 274]

Probab=90.42  E-value=0.037  Score=51.64  Aligned_cols=30  Identities=17%  Similarity=0.201  Sum_probs=27.6

Q ss_pred             cceecccccCCccchhchhhhhhcCceeeh
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      +.+++|-||.||||+.+.+|+.++.++.+.
T Consensus        37 ~~Ll~GPpG~GKTtla~~la~~~~~~~~~~   66 (239)
T d1ixsb2          37 HLLLFGPPGLGKTTLAHVIAHELGVNLRVT   66 (239)
T ss_dssp             CEEEECCTTSCHHHHHHHHHHHHTCCEEEE
T ss_pred             eEEEECCCCCCHHHHHHHHHHHhCCCeEec
Confidence            577999999999999999999999998774

>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Adenosine-5'phosphosulfate kinase (APS kinase)
domain: Adenosine-5'phosphosulfate kinase (APS kinase)
species: Fungus (Penicillium chrysogenum) [TaxId: 5076]

Probab=90.36  E-value=0.038  Score=51.24  Aligned_cols=23  Identities=13%  Similarity=0.033  Sum_probs=20.6

Q ss_pred             cceecccccCCccchhchhhhhh
Q 007151          541 HIFTYFLFSFGNFSAEGTISENH  563 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~  563 (616)
                      =+.+.|+||+||||+++.|++.+
T Consensus        26 vIwltGlsGsGKTTia~~L~~~l   48 (208)
T d1m7ga_          26 TIWLTGLSASGKSTLAVELEHQL   48 (208)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHH
Confidence            37889999999999999999765

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.33  E-value=0.23  Score=43.84  Aligned_cols=70  Identities=13%  Similarity=0.100  Sum_probs=41.4

Q ss_pred             EEEEEccchhHHHHHH--HHHHC---C-CeEEEEECCHHHHHHHHHHHCC---cc--cch-hcccccCCCCccEEEEcCC
Q 007151          383 LFVVIGAGGAGKALAY--GAKAK---G-ARVVIANRTYDRARELAETVGG---HA--LSL-ADLENFNPEDGMILANTTS  450 (616)
Q Consensus       383 ~vlVlGAGGagrAia~--~L~~~---G-~~V~v~nRt~~ka~~la~~~~~---~~--~~~-~~l~~~~~~~~divInat~  450 (616)
                      |+.|+|||..+.+.++  .+...   . .++.+++.++++++...+....   ..  ... .+..+ ...++|+||++++
T Consensus         2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~-~l~~aDvVVita~   80 (162)
T d1up7a1           2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEG-AVVDAKYVIFQFR   80 (162)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHH-HHTTCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCccc-ccCCCCEEEEecc
Confidence            6899999955544443  33322   2 3899999999998765432211   10  000 11111 2456899999998


Q ss_pred             CCC
Q 007151          451 IGM  453 (616)
Q Consensus       451 ~gm  453 (616)
                      .+-
T Consensus        81 ~~~   83 (162)
T d1up7a1          81 PGG   83 (162)
T ss_dssp             TTH
T ss_pred             cCC
Confidence            753

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.30  E-value=0.11  Score=48.25  Aligned_cols=31  Identities=35%  Similarity=0.607  Sum_probs=29.3

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      |+|+|+|.+|..+|..|++.|.+|.|+.|+.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            8999999999999999999999999999864

>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: UMP/CMP kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.29  E-value=0.04  Score=49.63  Aligned_cols=29  Identities=17%  Similarity=0.001  Sum_probs=25.5

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      .++++|.||+||||.++.||+.++-+.+.
T Consensus         3 iI~i~GppGSGKsT~a~~La~~~g~~~i~   31 (194)
T d1teva_           3 VVFVLGGPGAGKGTQCARIVEKYGYTHLS   31 (194)
T ss_dssp             EEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHhCCceEc
Confidence            36899999999999999999999877664

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.29  E-value=0.1  Score=48.89  Aligned_cols=38  Identities=26%  Similarity=0.312  Sum_probs=32.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRAREL  420 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~l  420 (616)
                      .|+|||||.+|..+|..|++.|.+|.|+.|+..-..++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            59999999999999999999999999999976443333

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.18  E-value=0.075  Score=47.64  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=30.5

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++++|+|||+|.+|..+|..+++.|.+|+|+.|.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            4678999999999999999999999999998753

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.14  E-value=0.13  Score=47.03  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=33.3

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .+++||+|+|+|+|-.|--+|+.+++.+++++++-|+
T Consensus        28 ~~~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCCccHHHHHHHHHhhhccccccccc
Confidence            4689999999999999999999999999988777775

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.07  E-value=0.13  Score=43.63  Aligned_cols=45  Identities=16%  Similarity=0.191  Sum_probs=37.1

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC--------HHHHHHHHHHHC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT--------YDRARELAETVG  425 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt--------~~ka~~la~~~~  425 (616)
                      .++++|+|+|-+|-.+|..++++|.+|+++.|.        ++-++.+.+.+.
T Consensus        26 p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~il~~~d~~~~~~l~~~l~   78 (125)
T d1ojta2          26 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNE   78 (125)
T ss_dssp             CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHG
T ss_pred             CCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeeccccccchhhHHHHHHHHHH
Confidence            479999999999999999999999999999874        345555555554

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.78  E-value=0.12  Score=47.61  Aligned_cols=33  Identities=27%  Similarity=0.247  Sum_probs=29.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHC--CCeEEEEECCH
Q 007151          382 KLFVVIGAGGAGKALAYGAKAK--GARVVIANRTY  414 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~--G~~V~v~nRt~  414 (616)
                      .+|+|||||.+|.++|..|.+.  |++|+|+.+.+
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            3799999999999999999775  67999999874

>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Archaeal fructose 1,6-bisphosphate aldolase
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=89.58  E-value=3.4  Score=38.53  Aligned_cols=123  Identities=19%  Similarity=0.138  Sum_probs=76.6

Q ss_pred             HHhhhhcCCCEEEEEecCCCCCChhhHH---HHHhh---hCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCCcEE
Q 007151           42 MGKANASGADLVEIRLDGLKNFNPRENI---KTLIK---ESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYI  115 (616)
Q Consensus        42 l~~~~~~gaD~vElRlD~l~~~~~~~~l---~~l~~---~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~dyv  115 (616)
                      ++++++.|+|+|=+.+.+-++. ..+.+   +++.+   ..++|+++-.-....+-.-..+++.-....+.+.++|+|.+
T Consensus        96 ve~a~rlGadaV~~~v~~g~~~-e~~~l~~~~~v~~e~~~~glP~v~e~~p~g~~~~~~~~~~~v~~aaria~ElGaDiv  174 (251)
T d1ojxa_          96 VEEAVSLGASAVGYTIYPGSGF-EWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAARIALELGADAM  174 (251)
T ss_dssp             HHHHHHTTCSEEEEEECTTSTT-HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred             HHHHHhchhceEEEEEeCCCCc-hHHHHHHHHHHHHHHHHcCCeEEEEEeecCCccccCCCHHHHHHHHHHHHHhCCCEE
Confidence            3445678999999999765433 33333   34443   34899998865543222223344544455778889999999


Q ss_pred             EEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCC
Q 007151          116 DVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGAD  168 (616)
Q Consensus       116 DIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaD  168 (616)
                      =+++-.+.+-+.++... .....++++-=  .+..+.+++.+..+.+.+.||-
T Consensus       175 K~~~p~~~~~~~~~v~~-a~~~pv~~~gG--~~~~~~~~~l~~~~~a~~~Ga~  224 (251)
T d1ojxa_         175 KIKYTGDPKTFSWAVKV-AGKVPVLMSGG--PKTKTEEDFLKQVEGVLEAGAL  224 (251)
T ss_dssp             EECCCSSHHHHHHHHHH-TTTSCEEEECC--SCCSSHHHHHHHHHHHHHTTCC
T ss_pred             EecCCCcHHHHHHHHHh-cCCCceEEeCC--CCCCCHHHHHHHHHHHHHCCCc
Confidence            99998776655554432 12345555431  2233567788888888788874

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.03  E-value=0.11  Score=46.71  Aligned_cols=33  Identities=15%  Similarity=0.215  Sum_probs=29.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nR  412 (616)
                      ++++|+|+|+|.+|..+|..+++.|.+++|+.+
T Consensus         4 ~~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           4 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred             ccceEEEECCCHHHHHHHHHHHHcCCcEEEEEe
Confidence            357999999999999999999999998888864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=0.12  Score=50.01  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=29.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .++|||||-+|.++|+.|++.|.+|.|+.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECC
Confidence            5899999999999999999999999999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.84  E-value=0.18  Score=48.69  Aligned_cols=32  Identities=28%  Similarity=0.240  Sum_probs=29.7

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |++||+|| |-+|+.++..|.+.|++|+.++|.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            78999998 779999999999999999999984

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.81  E-value=0.27  Score=43.78  Aligned_cols=72  Identities=10%  Similarity=0.017  Sum_probs=42.6

Q ss_pred             cEEEEEccc--hhHHHHHHHHHHC---CC-eEEEEECCHHH--HHHHHHH-------HCCcc--cchhcccccCCCCccE
Q 007151          382 KLFVVIGAG--GAGKALAYGAKAK---GA-RVVIANRTYDR--ARELAET-------VGGHA--LSLADLENFNPEDGMI  444 (616)
Q Consensus       382 k~vlVlGAG--GagrAia~~L~~~---G~-~V~v~nRt~~k--a~~la~~-------~~~~~--~~~~~l~~~~~~~~di  444 (616)
                      .|+.|+|||  |.+.+++..+...   .. +|+++++++++  ++.+-..       ++...  ....+..+ .+.++|+
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~-al~gaDv   80 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR-ALDGADF   80 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH-HHTTCSE
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh-hcCCCCE
Confidence            379999998  5666666655543   23 89999997644  4443211       11111  11122222 2456899


Q ss_pred             EEEcCCCCCC
Q 007151          445 LANTTSIGMQ  454 (616)
Q Consensus       445 vInat~~gm~  454 (616)
                      ||+|++++-.
T Consensus        81 Vv~ta~~~~~   90 (169)
T d1s6ya1          81 VTTQFRVGGL   90 (169)
T ss_dssp             EEECCCTTHH
T ss_pred             EEEccccCCC
Confidence            9999998744

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.77  E-value=0.16  Score=44.59  Aligned_cols=33  Identities=33%  Similarity=0.434  Sum_probs=27.6

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEEC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nR  412 (616)
                      ++++|+|+|+|.+|-.+|..|.++|.+++|+-+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEe
Confidence            367999999999999999999999986555433

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.67  E-value=0.27  Score=44.76  Aligned_cols=39  Identities=18%  Similarity=0.212  Sum_probs=36.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELA  421 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la  421 (616)
                      ++.|+|+|-+|.++|..|++.|.+|+.++.+.++.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            589999999999999999999999999999998887764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.60  E-value=0.21  Score=41.97  Aligned_cols=66  Identities=14%  Similarity=0.203  Sum_probs=47.0

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCccc-----chhcccccCCCCccEEEEcCC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHAL-----SLADLENFNPEDGMILANTTS  450 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~-----~~~~l~~~~~~~~divInat~  450 (616)
                      |.++|+|.|..|+.++..|.  |.+|.++..++++.+.+... +..++     +-+.+.+....+++.+|-+++
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~-~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRS-GANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHT-TCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhc-CccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            56899999999999999984  45688889998888777543 33221     222233435677888887776

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=88.37  E-value=0.28  Score=40.65  Aligned_cols=36  Identities=28%  Similarity=0.479  Sum_probs=32.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECCHH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRTYD  415 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt~~  415 (616)
                      ...|+.|+|+|-.||-++.+..++|+++.+++.+.+
T Consensus        10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            356899999999999999999999999999998743

>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: IolI-like
domain: Putative cytoplasmic protein STM4435
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.19  E-value=1.8  Score=40.28  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=44.6

Q ss_pred             CHHHHHHHHHhhhhcCCCEEEEEecCCCCC----ChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCC-H---HHHHHHHH
Q 007151           34 SVDKMVVDMGKANASGADLVEIRLDGLKNF----NPRENIKTLIKESPVPTLFTYRPIWEGGQYDGD-E---NERVDVLR  105 (616)
Q Consensus        34 ~~~~~~~~l~~~~~~gaD~vElRlD~l~~~----~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~-~---e~~~~ll~  105 (616)
                      +++++++.   +.+.|.|.||||.|.....    ...++++.+.++.+++++--. .   ++.+... +   +...++++
T Consensus        19 ~lee~l~~---a~~~G~dgiEl~~~~~~~~~~~~~~~~~~k~~l~~~gl~i~~l~-~---~~~~~~~~~~~~~~~~~~i~   91 (271)
T d2q02a1          19 SIEAFFRL---VKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTIN-A---VYPFNQLTEEVVKKTEGLLR   91 (271)
T ss_dssp             CHHHHHHH---HHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEE-E---ETTTTSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHH---HHHhCCCEEEEecCcccccccccCCHHHHHHHHHHcCCcEEEee-c---ccccCCCCHHHHHHHHHHHH
Confidence            45666554   4567999999998865422    224567777777787654321 1   1223222 2   22344566


Q ss_pred             HHHHhCCcEEEE
Q 007151          106 LAMELGADYIDV  117 (616)
Q Consensus       106 ~~~~~g~dyvDI  117 (616)
                      .|.++|+..|=+
T Consensus        92 ~a~~lG~~~v~~  103 (271)
T d2q02a1          92 DAQGVGARALVL  103 (271)
T ss_dssp             HHHHHTCSEEEE
T ss_pred             HHHHcCCcEEEE
Confidence            666777776643

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.05  E-value=0.18  Score=48.27  Aligned_cols=31  Identities=39%  Similarity=0.652  Sum_probs=29.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -|+|||+|.+|.++|..|++.|.+|.|+.+.
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence            4999999999999999999999999999874

>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: HslU
species: Haemophilus influenzae [TaxId: 727]

Probab=87.95  E-value=0.068  Score=52.48  Aligned_cols=32  Identities=6%  Similarity=-0.020  Sum_probs=28.4

Q ss_pred             ccccceecccccCCccchhchhhhhhcCceee
Q 007151          538 NKFHIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      ..-+.+++|=||+|||++.|.+|+.++.+|+-
T Consensus        48 ~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~   79 (309)
T d1ofha_          48 TPKNILMIGPTGVGKTEIARRLAKLANAPFIK   79 (309)
T ss_dssp             CCCCEEEECCTTSSHHHHHHHHHHHHTCCEEE
T ss_pred             CCceEEEECCCCCCHHHHHHHHhhccccchhc
Confidence            34678999999999999999999999998753

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.93  E-value=0.19  Score=45.55  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=28.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -++|||+|.+|.++|..+++.|.+|+|+.+.
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence            3899999999999999999999999999864

>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.79  E-value=1.4  Score=40.11  Aligned_cols=117  Identities=21%  Similarity=0.262  Sum_probs=71.2

Q ss_pred             eEEEEeecCCCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEE---EeccCCCCCCCCCCHHHH
Q 007151           24 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLF---TYRPIWEGGQYDGDENER  100 (616)
Q Consensus        24 ~~Icv~l~~~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~---T~Rt~~eGG~~~~~~e~~  100 (616)
                      +.| ..|+..+.+++..-++...+.|.+++|+.+.-   .+..+.++.+++...--+++   |+.+          .   
T Consensus        10 ~ii-pvlr~~~~~~a~~~~~al~~~Gi~~iEitlr~---p~a~~~i~~l~~~~~~~~~vGaGTV~~----------~---   72 (202)
T d1wa3a1          10 KIV-AVLRANSVEEAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTVTS----------V---   72 (202)
T ss_dssp             CEE-EEECCSSHHHHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESCCS----------H---
T ss_pred             CEE-EEEECCCHHHHHHHHHHHHHcCCCEEEEecCC---ccHHHHHHHHHHhcCCCcEEEeccccc----------H---
Confidence            344 34889999999998888888999999998752   23344566655322112333   4443          2   


Q ss_pred             HHHHHHHHHhCCcEEEEEcccchhhhHHhhccCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE
Q 007151          101 VDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKF  172 (616)
Q Consensus       101 ~~ll~~~~~~g~dyvDIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKi  172 (616)
                       +-++.+++.|++++ |-=..+.++.+...   ..+..+|-.-    .||+  |+    .++.++|+|++|+
T Consensus        73 -~~~~~a~~aGa~fi-vsP~~~~~v~~~~~---~~~i~~iPGv----~Tps--Ei----~~A~~~G~~~lK~  129 (202)
T d1wa3a1          73 -EQCRKAVESGAEFI-VSPHLDEEISQFCK---EKGVFYMPGV----MTPT--EL----VKAMKLGHTILKL  129 (202)
T ss_dssp             -HHHHHHHHHTCSEE-ECSSCCHHHHHHHH---HHTCEEECEE----CSHH--HH----HHHHHTTCCEEEE
T ss_pred             -HHHHHHHhhcccEE-eCCCCcHHHHHHHH---hcCCceeCCc----CcHH--HH----HHHHHCCCCEEEe
Confidence             34677889999987 32233444444333   2345555433    2543  33    3445799999997

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.72  E-value=0.21  Score=45.19  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=28.9

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -++|||+|.+|.++|..++++|.+|.|+.+.
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            3899999999999999999999999999875

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.63  E-value=0.28  Score=42.92  Aligned_cols=34  Identities=32%  Similarity=0.360  Sum_probs=30.0

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt  413 (616)
                      -+++|+|||+|-+|--.|..+.+.|+ .|+++.|.
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            46789999999999999999999999 78888774

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.62  E-value=0.24  Score=45.00  Aligned_cols=31  Identities=29%  Similarity=0.344  Sum_probs=28.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -|+|||+|.+|.++|..+++.|.+|.|+.+.
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence            4899999999999999999999999999864

>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Chloroplast protein translocon GTPase Toc34
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.57  E-value=0.069  Score=51.01  Aligned_cols=47  Identities=17%  Similarity=0.140  Sum_probs=32.4

Q ss_pred             HcCC-CCCCchH-HHHHHHHHH-HhhcccccceecccccCCccchhchhh
Q 007151          514 FTGL-PGKMNAP-HLYKFFVLL-LYSFNKFHIFTYFLFSFGNFSAEGTIS  560 (616)
Q Consensus       514 wtG~-~~p~~~~-~l~~~l~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~  560 (616)
                      |+|. +.|.... .+.+.+..+ +...++++++|+|.||+||||++-.|.
T Consensus         4 ~~~~~~~~~~~~~~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~il   53 (257)
T d1h65a_           4 WSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSII   53 (257)
T ss_dssp             CGGGGGSCHHHHHHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHH
T ss_pred             hhhHhhhhHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCCcHHHHHHHHh
Confidence            8887 5665442 333444444 223567999999999999999987764

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.53  E-value=0.26  Score=45.80  Aligned_cols=37  Identities=22%  Similarity=0.227  Sum_probs=32.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHH--------------------CCC-eEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKA--------------------KGA-RVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~--------------------~G~-~V~v~nRt  413 (616)
                      .++.+|+|+|||+|-+|--+|+.|.+                    .|+ +|+++.|.
T Consensus        35 ~~~~gk~VvVIGgGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RR   92 (225)
T d1cjca1          35 PDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRR   92 (225)
T ss_dssp             CCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSS
T ss_pred             ccccCceEEEECCchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEc
Confidence            46779999999999999999988887                    588 89999985

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.44  E-value=0.28  Score=45.21  Aligned_cols=37  Identities=35%  Similarity=0.441  Sum_probs=31.6

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHH--------------------HCCC-eEEEEECC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAK--------------------AKGA-RVVIANRT  413 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~--------------------~~G~-~V~v~nRt  413 (616)
                      .++.+|+|+|||+|-+|--+|+.|.                    +.|+ +|+++.|.
T Consensus        35 ~~~~gk~VvVIGgGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RR   92 (216)
T d1lqta1          35 PDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR   92 (216)
T ss_dssp             CCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred             ccccCceEEEECCCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEEC
Confidence            4567999999999999999988776                    5788 89999884

>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Deoxyribose-phosphate aldolase DeoC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.38  E-value=4.4  Score=37.92  Aligned_cols=142  Identities=20%  Similarity=0.133  Sum_probs=91.2

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCCCCChhhHHHHHhhhCCCcEEEEeccCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 007151           33 ESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGA  112 (616)
Q Consensus        33 ~~~~~~~~~l~~~~~~gaD~vElRlD~l~~~~~~~~l~~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll~~~~~~g~  112 (616)
                      .|.+++..-.+++...++.+|=++.-+.      +..+..++.++.. +.|+=.-+.|-.   +.+.+..-.+.+++.|+
T Consensus        48 ~t~e~i~~lc~~A~~~~~aaVcV~P~~v------~~a~~~L~gs~v~-v~tVigFP~G~~---~~~~K~~Ea~~Ai~~GA  117 (251)
T d1o0ya_          48 ATPDDIKKLCLEARENRFHGVCVNPCYV------KLAREELEGTDVK-VVTVVGFPLGAN---ETRTKAHEAIFAVESGA  117 (251)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEECGGGH------HHHHHHHTTSCCE-EEEEESTTTCCS---CHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHhhcCceEEEECHHHH------HHHHHHhcCCCce-EEeeccCCCCCC---cHHHHHHHHHHHHHcCC
Confidence            3477788778888888777765544332      2344444555555 456544444433   44677777888999999


Q ss_pred             cEEEEEcccch----------hhhHHhhc-cCCCCceEEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEEe----ecC
Q 007151          113 DYIDVELQVAR----------EFNDSIRG-KKPEKCKVIVSSHNYQYTPSVEDLSNLVARIQASGADIVKFAT----TAL  177 (616)
Q Consensus       113 dyvDIEl~~~~----------~~~~~l~~-~~~~~~kiI~S~Hdf~~tP~~~el~~~~~~~~~~gaDIvKia~----~~~  177 (616)
                      +-||+=++...          +.++.+.. .+..-.|+|+-....    +.+++....+-+.+.|||.+|--+    ...
T Consensus       118 dEID~Vin~~~l~~g~~~~v~~ei~~v~~~~~~~~lKVIlEt~~L----~~~e~~~a~~ia~~aGadfvKTSTGf~~~ga  193 (251)
T d1o0ya_         118 DEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL----DTEEKIAACVISKLAGAHFVKTSTGFGTGGA  193 (251)
T ss_dssp             SEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC----CHHHHHHHHHHHHHTTCSEEECCCSSSSCCC
T ss_pred             ceEEEEeccchhhcCCHHHHHHHHHHHHHHhcccceeeeeccccc----CcHHHHHHHHHHHHhCcceeeccCCCCCCCc
Confidence            99999666421          22333333 234567888854433    567788888888899999999854    345


Q ss_pred             CHhHHHHHHHH
Q 007151          178 DITDVARVFQI  188 (616)
Q Consensus       178 s~~D~~~ll~~  188 (616)
                      +.+|+..+.+.
T Consensus       194 t~e~V~~m~~~  204 (251)
T d1o0ya_         194 TAEDVHLMKWI  204 (251)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            78888555444

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.08  E-value=0.23  Score=48.22  Aligned_cols=34  Identities=24%  Similarity=0.299  Sum_probs=30.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +.-.|+|||||-+|.++|+.|.+.|.+|+|+.++
T Consensus         6 ~~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~   39 (298)
T d1w4xa1           6 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETA   39 (298)
T ss_dssp             SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CCCCEEEECccHHHHHHHHHHHhCCCCEEEEEcC
Confidence            3457999999999999999999999999999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.03  E-value=0.31  Score=47.78  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=31.3

Q ss_pred             cCCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          379 LAGKLFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       379 l~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      .++.+|||+|+ |-+|+.++..|.+.|.+|++++|.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~   48 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWK   48 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            46889999998 779999999999999999999764

>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CDC6, N-domain
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=86.99  E-value=0.08  Score=49.28  Aligned_cols=26  Identities=8%  Similarity=-0.253  Sum_probs=23.3

Q ss_pred             cceecccccCCccchhchhhhhhcCc
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKV  566 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~  566 (616)
                      +.+++|.||.|||++-+.+++.++..
T Consensus        45 ~lll~GppGtGKT~l~~~l~~~l~~~   70 (276)
T d1fnna2          45 RATLLGRPGTGKTVTLRKLWELYKDK   70 (276)
T ss_dssp             EEEEECCTTSSHHHHHHHHHHHHTTS
T ss_pred             ceEEECCCCCCHHHHHHHHHHHHhcc
Confidence            67899999999999999999998643

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=86.87  E-value=0.73  Score=41.13  Aligned_cols=73  Identities=15%  Similarity=0.053  Sum_probs=46.3

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHC---CC----eEEEEECC--HHHHHHHHHHHCCccc-------chhcccccCCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAK---GA----RVVIANRT--YDRARELAETVGGHAL-------SLADLENFNPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~---G~----~V~v~nRt--~~ka~~la~~~~~~~~-------~~~~l~~~~~~~~di  444 (616)
                      -+|.|+|| |.+|.++++.|+..   |.    .+.+++..  .++++.++-++..-..       ...+..+ ...+.|+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~-~~~~aDv  103 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYE-VFEDVDW  103 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-HTTTCSE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchh-hccCCce
Confidence            47999997 89999999999874   32    56666664  3556666655432111       1112122 3567899


Q ss_pred             EEEcCCCCCCC
Q 007151          445 LANTTSIGMQP  455 (616)
Q Consensus       445 vInat~~gm~p  455 (616)
                      +|-+++..-.|
T Consensus       104 Vvi~ag~~rkp  114 (175)
T d7mdha1         104 ALLIGAKPRGP  114 (175)
T ss_dssp             EEECCCCCCCT
T ss_pred             EEEeeccCCCC
Confidence            99988765444

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.75  E-value=0.29  Score=47.56  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=29.9

Q ss_pred             CCcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 007151          380 AGKLFVVIGA-GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       380 ~~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      .-|++||+|+ |-+|+.++..|.+.|.+|+.++|
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4589999998 77999999999999999999876

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=86.74  E-value=0.084  Score=51.60  Aligned_cols=71  Identities=11%  Similarity=0.061  Sum_probs=44.1

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCCcc--cchhc---ccccCCCCccEEEEcCCCCC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGGHA--LSLAD---LENFNPEDGMILANTTSIGM  453 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~~~--~~~~~---l~~~~~~~~divInat~~gm  453 (616)
                      ||||+|+ |-+|+.++..|.+.|. +|+.+++...+...+.+.-+...  .++.+   +.+....++|+||+++....
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~   79 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence            6999998 6799999999999996 89998875443332221101011  12211   11112235899999888643

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.66  E-value=0.29  Score=44.83  Aligned_cols=31  Identities=35%  Similarity=0.571  Sum_probs=29.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -++|||+|.+|.++|..+++.|.+|.|+.+.
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~   38 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERY   38 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            4899999999999999999999999999875

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.99  E-value=0.25  Score=47.76  Aligned_cols=31  Identities=42%  Similarity=0.699  Sum_probs=29.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -|+|||+|.+|..+|..|++.|.+|.|+.+.
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3999999999999999999999999999874

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.94  E-value=0.34  Score=43.59  Aligned_cols=31  Identities=32%  Similarity=0.439  Sum_probs=28.6

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         5 DviVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            4899999999999999999999999999875

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.93  E-value=0.28  Score=42.91  Aligned_cols=31  Identities=29%  Similarity=0.404  Sum_probs=28.1

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      -|+|||+|.+|-.+|..+++.|.++.++.|.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            3899999999999999999999999999863

>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: CMP kinase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.90  E-value=0.11  Score=47.42  Aligned_cols=34  Identities=15%  Similarity=0.022  Sum_probs=27.7

Q ss_pred             ccccceecccccCCccchhchhhhhhcCceeehh
Q 007151          538 NKFHIFTYFLFSFGNFSAEGTISENHGKVLVWSV  571 (616)
Q Consensus       538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  571 (616)
                      +++.+.+-|-||+||||.++.||+.++-+++=+-
T Consensus         2 k~i~IaIdGp~GsGKgT~ak~La~~lg~~~istG   35 (223)
T d1q3ta_           2 KTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTG   35 (223)
T ss_dssp             CCCEEEEECSSCSSHHHHHHHHHHHHCCEEEEHH
T ss_pred             CceEEEEECCCCCCHHHHHHHHHHHhCCcEECHH
Confidence            3445555599999999999999999998877643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.82  E-value=0.059  Score=49.42  Aligned_cols=30  Identities=30%  Similarity=0.272  Sum_probs=25.7

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC------eEEEEEC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA------RVVIANR  412 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~------~V~v~nR  412 (616)
                      ||+|||||-+|.++|+.|++.|.      ++.++.+
T Consensus         2 kV~VIGaGi~GlstA~~L~~~G~~v~v~e~~~i~~~   37 (246)
T d1kifa1           2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYAD   37 (246)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEES
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCceEEeeeeeccc
Confidence            69999999999999999999985      4566654

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.67  E-value=0.26  Score=44.79  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=29.5

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ..++|||+|.+|..+|..++++|.+|.|+.+.
T Consensus         6 ~DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            35899999999999999999999999999875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.62  E-value=0.32  Score=47.14  Aligned_cols=32  Identities=28%  Similarity=0.224  Sum_probs=28.3

Q ss_pred             cEE-EEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLF-VVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~v-lVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |+| ||+|+ |-+|+.++..|.+.|++|+.++|.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            466 99998 569999999999999999998884

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.56  E-value=0.3  Score=43.90  Aligned_cols=30  Identities=27%  Similarity=0.439  Sum_probs=28.1

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            899999999999999999999999999863

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.46  E-value=0.54  Score=40.86  Aligned_cols=73  Identities=15%  Similarity=0.058  Sum_probs=46.0

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCC-------eEEEEEC--CHHHHHHHHHHHCCcc------cch-hcccccCCCCccE
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGA-------RVVIANR--TYDRARELAETVGGHA------LSL-ADLENFNPEDGMI  444 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~-------~V~v~nR--t~~ka~~la~~~~~~~------~~~-~~l~~~~~~~~di  444 (616)
                      -||.|+|| |.+|.++++.|+..+.       .+.+++.  +.++++.+..++....      ... .+..+ ...+.|+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dv   82 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEI-AFKDLDV   82 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHH-HTTTCSE
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccccc-ccCCceE
Confidence            38999996 9999999999986442       4667665  4566666655432110      111 11111 3456899


Q ss_pred             EEEcCCCCCCC
Q 007151          445 LANTTSIGMQP  455 (616)
Q Consensus       445 vInat~~gm~p  455 (616)
                      +|-+++....|
T Consensus        83 VVitag~~~~~   93 (154)
T d5mdha1          83 AILVGSMPRRD   93 (154)
T ss_dssp             EEECCSCCCCT
T ss_pred             EEEecccCCCC
Confidence            99998865444

>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: HslU
species: Haemophilus influenzae [TaxId: 727]

Probab=85.46  E-value=0.12  Score=53.57  Aligned_cols=34  Identities=6%  Similarity=-0.028  Sum_probs=31.2

Q ss_pred             cccccceecccccCCccchhchhhhhhcCceeeh
Q 007151          537 FNKFHIFTYFLFSFGNFSAEGTISENHGKVLVWS  570 (616)
Q Consensus       537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  570 (616)
                      .++.|+++||=+|+|||.+.|+||+.++=|||-.
T Consensus        47 i~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~   80 (443)
T d1g41a_          47 VTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV   80 (443)
T ss_dssp             CCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEE
T ss_pred             cccccEEEECCCCCCHHHHHHHHHHHhCCCEEEe
Confidence            3567999999999999999999999999999865

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=85.45  E-value=0.28  Score=47.44  Aligned_cols=30  Identities=30%  Similarity=0.401  Sum_probs=28.2

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |+|||+|.+|.++|..+++.|.+|.|+.+.
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence            999999999999999999999999999764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=85.42  E-value=0.31  Score=37.86  Aligned_cols=32  Identities=25%  Similarity=0.324  Sum_probs=29.9

Q ss_pred             cEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          382 KLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       382 k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      |++.|+|+|-.||-++.+...+|.++.+++.+
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~   33 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLD   33 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTT
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            68999999999999999999999999998865

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.26  E-value=2.5  Score=38.09  Aligned_cols=74  Identities=22%  Similarity=0.287  Sum_probs=46.0

Q ss_pred             cccCCcEEEEEccchhHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHCC---cc-cchhcccccCCCCccEEEEcCCC
Q 007151          377 SALAGKLFVVIGAGGAGKALAYGAKAKGA-RVVIANRTYDRARELAETVGG---HA-LSLADLENFNPEDGMILANTTSI  451 (616)
Q Consensus       377 ~~l~~k~vlVlGAGGagrAia~~L~~~G~-~V~v~nRt~~ka~~la~~~~~---~~-~~~~~l~~~~~~~~divInat~~  451 (616)
                      .+++|++||=+|+|--+-++  +++..|+ +|+.++.+++.++...+.+..   .. +-..+... ....+|+||..-|-
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i--~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~-~~~~fD~Vi~nPP~  119 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSY--GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIMNPPF  119 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHH--HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEECCCC
T ss_pred             CCCCCCEEEECcCcchHHHH--HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh-hCCcCcEEEEcCcc
Confidence            36889999999997222233  3456787 899999998766655544321   11 11112223 24568999987776


Q ss_pred             CC
Q 007151          452 GM  453 (616)
Q Consensus       452 gm  453 (616)
                      +.
T Consensus       120 ~~  121 (201)
T d1wy7a1         120 GS  121 (201)
T ss_dssp             SS
T ss_pred             cc
Confidence            53

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.26  E-value=0.3  Score=49.04  Aligned_cols=31  Identities=35%  Similarity=0.486  Sum_probs=28.6

Q ss_pred             EEEEEccchhHHHHHHHHHH------CCCeEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKA------KGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~------~G~~V~v~nRt  413 (616)
                      -|+|+|||.+|.++|+.|++      .|.+|.|+.|.
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~   70 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA   70 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCC
Confidence            59999999999999999997      78899999985

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.18  E-value=0.37  Score=46.81  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=28.1

Q ss_pred             cEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 007151          382 KLFVVIGA-GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       382 k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      |||||+|+ |-+|++++..|.+.|.+|++++|
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            78999998 67999999999999999998864

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.17  E-value=0.27  Score=47.62  Aligned_cols=33  Identities=33%  Similarity=0.572  Sum_probs=29.8

Q ss_pred             CcEEEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ..-|+|||+|.+|.++|..+++.|.+|.|+.+.
T Consensus        19 ~~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          19 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             ccCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            345999999999999999999999999999764

>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein
species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]

Probab=84.80  E-value=0.13  Score=48.84  Aligned_cols=29  Identities=10%  Similarity=-0.013  Sum_probs=26.9

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      ..+|+|=||+|||++.+.+|+.++.+|+.
T Consensus        42 ~vLL~GppGtGKT~la~alA~~~~~~~~~   70 (246)
T d1d2na_          42 SVLLEGPPHSGKTALAAKIAEESNFPFIK   70 (246)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHHTCSEEE
T ss_pred             EEEEECcCCCCHHHHHHHHhhcccccccc
Confidence            47899999999999999999999999875

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=84.72  E-value=0.35  Score=45.75  Aligned_cols=35  Identities=34%  Similarity=0.474  Sum_probs=30.7

Q ss_pred             CCcEEEEEccchhHHHHHHHHHH-CCCeEEEEECCH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKA-KGARVVIANRTY  414 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~-~G~~V~v~nRt~  414 (616)
                      .+.-|+|||||.+|.++|+.|++ .|.+|+|+.+.+
T Consensus        32 ~e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            35669999999999999999987 599999999864

>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Replication factor C5
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.47  E-value=0.19  Score=46.59  Aligned_cols=28  Identities=18%  Similarity=-0.022  Sum_probs=23.1

Q ss_pred             cceecccccCCccchhchhhhhhcCcee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      +.+++|.||+||||+-+.+++.+..+..
T Consensus        35 ~lll~Gp~G~GKTt~~~~la~~l~~~~~   62 (252)
T d1sxje2          35 HLLLYGPNGTGKKTRCMALLESIFGPGV   62 (252)
T ss_dssp             CEEEECSTTSSHHHHHHTHHHHHSCTTC
T ss_pred             eEEEECCCCCCHHHHHHHHHHhhcCccc
Confidence            3689999999999999999998744333

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.32  E-value=0.32  Score=44.50  Aligned_cols=30  Identities=27%  Similarity=0.386  Sum_probs=28.0

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEEC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nR  412 (616)
                      -++|||+|.+|.++|..+++.|.+|.|+.+
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCCCEEEECC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence            489999999999999999999999999984

>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.89  E-value=5.6  Score=37.43  Aligned_cols=147  Identities=16%  Similarity=0.196  Sum_probs=92.4

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCC----CCChhhHHHHHh---hh-CCCcEEEEeccCCCCCCCCCCHHHHHHHH
Q 007151           33 ESVDKMVVDMGKANASGADLVEIRLDGLK----NFNPRENIKTLI---KE-SPVPTLFTYRPIWEGGQYDGDENERVDVL  104 (616)
Q Consensus        33 ~~~~~~~~~l~~~~~~gaD~vElRlD~l~----~~~~~~~l~~l~---~~-~~~PiI~T~Rt~~eGG~~~~~~e~~~~ll  104 (616)
                      .+.++++..++...+.|||+|.+=.-.-.    ..++.+++.++.   +. .+..+++.+-|            .+.+..
T Consensus        23 ~~~~~a~~~~~~m~~~GAdiIDIGaeSTrPga~~is~~eE~~Rl~pvi~~l~~~~~~iSIDT------------~~~eVa   90 (264)
T d1ad1a_          23 NNVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVGFDVKISVDT------------FRSEVA   90 (264)
T ss_dssp             CSHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC------------SCHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCcCCHHHHHHhhhhHhhhhcccCcccchhh------------hhHHHH
Confidence            47888999999888999999998665432    123334444332   21 24455667776            245788


Q ss_pred             HHHHHhCCcEEE-EE-cccchhhhHHhhccCCCCceEEEEeccCCCCCC----HHH----HHHHHHHHHHcCCCEEEEEe
Q 007151          105 RLAMELGADYID-VE-LQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPS----VED----LSNLVARIQASGADIVKFAT  174 (616)
Q Consensus       105 ~~~~~~g~dyvD-IE-l~~~~~~~~~l~~~~~~~~kiI~S~Hdf~~tP~----~~e----l~~~~~~~~~~gaDIvKia~  174 (616)
                      +.|++.|+++|- |- ...+++..+ +...  .+..+|+-| . .++|.    ..+    +.+.++.+...|.+--+|..
T Consensus        91 ~~al~~Ga~iINDVs~g~~d~~~~~-~va~--~~~~~ilmH-~-~~~~~~~~~~~~v~~~~~~~~~~~~~~Gi~~~~Iil  165 (264)
T d1ad1a_          91 EACLKLGVDIINDQWAGLYDHRMFQ-VVAK--YDAEIVLMH-N-GNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWL  165 (264)
T ss_dssp             HHHHHTTCCEEEETTTTSSCTHHHH-HHHH--TTCEEEEEC-C-CCTTCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred             HHHHhcCCcEeeccccccccccHHH-HHhh--cCcceeeee-e-ccccccCccchhhhhHHHHHHHHHHhhccccceEEe
Confidence            899999999885 53 233444443 3322  466777754 3 33442    222    44555667788876667776


Q ss_pred             e-----cCCHhHHHHHHHHhhc---CCCCE
Q 007151          175 T-----ALDITDVARVFQITVH---SQVPI  196 (616)
Q Consensus       175 ~-----~~s~~D~~~ll~~~~~---~~~pl  196 (616)
                      =     .++.++++++++-+..   .+.|+
T Consensus       166 DPGiGFgKt~~~n~~ll~~l~~~~~~g~Pi  195 (264)
T d1ad1a_         166 DPGIGFAKTRNEEAEVMARLDELVATEYPV  195 (264)
T ss_dssp             ECCTTSSCCHHHHHHHHHCHHHHHTTCSCB
T ss_pred             ccCcCccccchhHHHHHHHHHHhhccCCce
Confidence            4     4899999999875433   36674

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.61  E-value=0.5  Score=42.55  Aligned_cols=30  Identities=37%  Similarity=0.564  Sum_probs=28.1

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++|||+|.+|..+|..+++.|.+|.|+.+.
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            799999999999999999999999999764

>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Holliday junction helicase RuvB
species: Thermotoga maritima [TaxId: 2336]

Probab=83.50  E-value=0.16  Score=46.87  Aligned_cols=29  Identities=10%  Similarity=0.021  Sum_probs=26.5

Q ss_pred             cceecccccCCccchhchhhhhhcCceee
Q 007151          541 HIFTYFLFSFGNFSAEGTISENHGKVLVW  569 (616)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (616)
                      +.+++|=||+||||+.+.+++.++..+..
T Consensus        37 ~~L~~GPpGtGKT~lA~~la~~~~~~~~~   65 (238)
T d1in4a2          37 HVLLAGPPGLGKTTLAHIIASELQTNIHV   65 (238)
T ss_dssp             CEEEESSTTSSHHHHHHHHHHHHTCCEEE
T ss_pred             eEEEECCCCCcHHHHHHHHHhccCCCccc
Confidence            58899999999999999999999988764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=83.41  E-value=0.51  Score=42.19  Aligned_cols=71  Identities=13%  Similarity=0.182  Sum_probs=46.3

Q ss_pred             CCcEEEEE--ccchhHHHHHHHHHHCCCeEEEEECCHHHH---HHHHHHHCCcc-cchh-----cc----ccc---CCCC
Q 007151          380 AGKLFVVI--GAGGAGKALAYGAKAKGARVVIANRTYDRA---RELAETVGGHA-LSLA-----DL----ENF---NPED  441 (616)
Q Consensus       380 ~~k~vlVl--GAGGagrAia~~L~~~G~~V~v~nRt~~ka---~~la~~~~~~~-~~~~-----~l----~~~---~~~~  441 (616)
                      .|++++|+  |+||+|.+++...+..|++|+.+.|+.++.   .+.+++++... ++.+     +.    .+.   ....
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence            46788888  458899999999999999887776654433   33456677543 2221     11    110   1345


Q ss_pred             ccEEEEcCC
Q 007151          442 GMILANTTS  450 (616)
Q Consensus       442 ~divInat~  450 (616)
                      .|+++|+.+
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999886

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=83.40  E-value=0.66  Score=43.20  Aligned_cols=31  Identities=16%  Similarity=0.289  Sum_probs=24.7

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEECC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      +|||+|+ |-+|++++..|.+.|..|.+..|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~~~~~   33 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHS   33 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEECTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEECCC
Confidence            6999998 779999999999888655554443

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=83.38  E-value=0.49  Score=44.23  Aligned_cols=30  Identities=33%  Similarity=0.579  Sum_probs=28.5

Q ss_pred             EEEEccchhHHHHHHHHHHCCCeEEEEECC
Q 007151          384 FVVIGAGGAGKALAYGAKAKGARVVIANRT  413 (616)
Q Consensus       384 vlVlGAGGagrAia~~L~~~G~~V~v~nRt  413 (616)
                      ++|||+|.+|..+|..+++.|.+|.++.+.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence            799999999999999999999999999875

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.38  E-value=0.19  Score=42.08  Aligned_cols=106  Identities=19%  Similarity=0.264  Sum_probs=62.5

Q ss_pred             cEEEEEccc----hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCCCC
Q 007151          382 KLFVVIGAG----GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKV  457 (616)
Q Consensus       382 k~vlVlGAG----GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p~~  457 (616)
                      |++.|+|++    -.|..+...|.+.|++|+-+|.+.+.       ..+.. .+.++.+ .....|+++-++|....+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~-------i~G~~-~y~sl~~-lp~~~D~vvi~vp~~~~~~-   71 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-------IEGLK-CYRSVRE-LPKDVDVIVFVVPPKVGLQ-   71 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------ETTEE-CBSSGGG-SCTTCCEEEECSCHHHHHH-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc-------ccCcc-ccccchh-ccccceEEEEEeCHHHHHH-
Confidence            689999985    57999999999999999999976321       11111 1222333 2345799998888543221 


Q ss_pred             CCCcccccccc--CccEEEEEeeCCcccHHHHHHHHcCCeEEccHHHH
Q 007151          458 DETPIPKHALG--HYALVFDAVYTPKITRLLREAEESGATIVSGLEMF  503 (616)
Q Consensus       458 ~~~pi~~~~l~--~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~Gl~ML  503 (616)
                          +-++...  -..+.+.  -.-....+.+.|++.|.+++.+-=|+
T Consensus        72 ----~l~~~~~~g~k~v~~~--~g~~~~~~~~~a~~~gi~vigpnC~~  113 (116)
T d1y81a1          72 ----VAKEAVEAGFKKLWFQ--PGAESEEIRRFLEKAGVEYSFGRCIM  113 (116)
T ss_dssp             ----HHHHHHHTTCCEEEEC--TTSCCHHHHHHHHHHTCEEECSCCHH
T ss_pred             ----HHHHHHhcCCceEEec--cchhhHHHHHHHHHcCCEEEcCCCCC
Confidence                1111111  1112111  12234567888999999887654343

>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.98  E-value=5.2  Score=38.09  Aligned_cols=161  Identities=14%  Similarity=0.209  Sum_probs=95.2

Q ss_pred             CCHHHHHHHHHhhhhcCCCEEEEEecCCC----CCChhhHHH-------HHhhhCCCcEEEEeccCCCCCCCCCCHHHHH
Q 007151           33 ESVDKMVVDMGKANASGADLVEIRLDGLK----NFNPRENIK-------TLIKESPVPTLFTYRPIWEGGQYDGDENERV  101 (616)
Q Consensus        33 ~~~~~~~~~l~~~~~~gaD~vElRlD~l~----~~~~~~~l~-------~l~~~~~~PiI~T~Rt~~eGG~~~~~~e~~~  101 (616)
                      .+.+++++.++..+..|||+|.+=--.-.    ..++.+++.       .+++.  .++++.+-|            .+.
T Consensus        35 ~~~~~a~~~a~~mi~~GAdiIDIGgeSTrPga~~vs~eeE~~Rl~pvi~~l~~~--~~~~iSIDT------------~~~  100 (282)
T d1ajza_          35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQR--FEVWISVDT------------SKP  100 (282)
T ss_dssp             SHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHH--CCCEEEEEC------------CCH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCccccccccCCcHHHHHHHHHHHHHHHhhc--ccceEEEEe------------cCh
Confidence            35678888888888899999988654321    122233333       33333  344567766            244


Q ss_pred             HHHHHHHHhCCcEE-EEEcccchhhhHHhhccCCCCceEEEEeccC-----CCCCC--------HHHHHHHHHHHHHcCC
Q 007151          102 DVLRLAMELGADYI-DVELQVAREFNDSIRGKKPEKCKVIVSSHNY-----QYTPS--------VEDLSNLVARIQASGA  167 (616)
Q Consensus       102 ~ll~~~~~~g~dyv-DIEl~~~~~~~~~l~~~~~~~~kiI~S~Hdf-----~~tP~--------~~el~~~~~~~~~~ga  167 (616)
                      +..+.|++.|+++| ||.-...++.++-+..   .+..+|+.|+.-     +..|.        .+.+.+.++.+.+.|.
T Consensus       101 eVa~~al~~Ga~iINDvsg~~~~~~~~~va~---~~~~~vlmh~~g~p~~~~~~~~y~dv~~~v~~~~~~~~~~~~~~GI  177 (282)
T d1ajza_         101 EVIRESAKVGAHIINDIRSLSEPGALEAAAE---TGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGI  177 (282)
T ss_dssp             HHHHHHHHTTCCEECCTTTTCSTTHHHHHHH---HTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCceEEechhhcccchhHHHhhc---cCceEEEeccCCCccccccCCcccchhhhhHHHHHHHHHHHHHcCC
Confidence            68889999999987 4443334444443332   356777776531     11121        1235566677888885


Q ss_pred             CEEEEEeec-----CCHhHHHHHHHHhhc---CCCCEEEEecCcchhhHhhh
Q 007151          168 DIVKFATTA-----LDITDVARVFQITVH---SQVPIIGLVMGERGLISRIL  211 (616)
Q Consensus       168 DIvKia~~~-----~s~~D~~~ll~~~~~---~~~plI~i~MG~~G~~SRil  211 (616)
                      +-=+|++=|     ++.++++++++-+..   .+.|+ .++.....-+..++
T Consensus       178 ~~~~IilDPGiGFgK~~~~n~~ll~~l~~~~~~~~Pi-LvG~SRKsfi~~~~  228 (282)
T d1ajza_         178 AKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPL-LVGMSRKSMIGQLL  228 (282)
T ss_dssp             CGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCB-EECCTTCHHHHHHH
T ss_pred             cHhhEecCCCcCcCCChhhhHHHHhhcchhhccccce-EEeccHHHHHHHHh
Confidence            434676655     799999999886544   36676 33444444444443

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.87  E-value=0.64  Score=39.04  Aligned_cols=36  Identities=14%  Similarity=0.274  Sum_probs=29.0

Q ss_pred             CcEEEEEccch-----------hHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          381 GKLFVVIGAGG-----------AGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       381 ~k~vlVlGAGG-----------agrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      .|+|||+|+|+           ++--++++|.+.|++++++|-+++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeT   50 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPET   50 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhh
Confidence            57999999983           4556778899999999999988653

>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Dihydropteroate synthetase-like
family: Dihydropteroate synthetase
domain: Dihydropteroate synthetase
species: Staphylococcus aureus [TaxId: 1280]

Probab=82.56  E-value=1.6  Score=41.41  Aligned_cols=104  Identities=23%  Similarity=0.265  Sum_probs=63.7

Q ss_pred             ccCCCCCCCCCCHHHHHHHHHHHHHhCCcEEEEEccc---------chhhhHHhh---c-cCCCCceEEEEeccCCCCCC
Q 007151           85 RPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQV---------AREFNDSIR---G-KKPEKCKVIVSSHNYQYTPS  151 (616)
Q Consensus        85 Rt~~eGG~~~~~~e~~~~ll~~~~~~g~dyvDIEl~~---------~~~~~~~l~---~-~~~~~~kiI~S~Hdf~~tP~  151 (616)
                      -+-.+||.+. +.+.-++..+..++.|+|+|||=-.+         .++.++++.   . .+  ..++++|.=    |-.
T Consensus        14 DSFsdgg~~~-~~~~a~~~~~~m~~~GAdiIDIGaeSTrPga~~is~~eE~~Rl~pvi~~l~--~~~~~iSID----T~~   86 (264)
T d1ad1a_          14 DSFSDGGKFN-NVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIV--GFDVKISVD----TFR   86 (264)
T ss_dssp             GGCSSTTTTC-SHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHT--TSSSEEEEE----CSC
T ss_pred             CCCCCCCcCC-CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCcCCHHHHHHhhhhHhhhhc--ccCcccchh----hhh
Confidence            3558899874 45666677778888999999993322         112222221   1 12  235677873    222


Q ss_pred             HHHHHHHHHHHHHcCCCEEEEEeecCCHhHHHHHHHHhhcCCCCEEEEecC
Q 007151          152 VEDLSNLVARIQASGADIVKFATTALDITDVARVFQITVHSQVPIIGLVMG  202 (616)
Q Consensus       152 ~~el~~~~~~~~~~gaDIvKia~~~~s~~D~~~ll~~~~~~~~plI~i~MG  202 (616)
                          .+..+.+.+.|+||+-=+..-....   +++++..+.+.|+|.|-|+
T Consensus        87 ----~eVa~~al~~Ga~iINDVs~g~~d~---~~~~~va~~~~~~ilmH~~  130 (264)
T d1ad1a_          87 ----SEVAEACLKLGVDIINDQWAGLYDH---RMFQVVAKYDAEIVLMHNG  130 (264)
T ss_dssp             ----HHHHHHHHHTTCCEEEETTTTSSCT---HHHHHHHHTTCEEEEECCC
T ss_pred             ----HHHHHHHHhcCCcEeeccccccccc---cHHHHHhhcCcceeeeeec
Confidence                3445667788999987543222222   3566777778999999874

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=82.21  E-value=0.53  Score=45.97  Aligned_cols=30  Identities=23%  Similarity=0.266  Sum_probs=28.3

Q ss_pred             EEEEEccchhHHHHHHHHHHCCCeEEEEEC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~~V~v~nR  412 (616)
                      -|+|||+|-+|..+|+.|++.|.+|.|+.|
T Consensus         4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             eEEEeCcCHHHHHHHHHHHHCcCeEEEEec
Confidence            489999999999999999999999999987

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.20  E-value=0.77  Score=39.40  Aligned_cols=34  Identities=24%  Similarity=0.212  Sum_probs=30.0

Q ss_pred             CcEEEEE--ccchhHHHHHHHHHHCCCeEEEEECCH
Q 007151          381 GKLFVVI--GAGGAGKALAYGAKAKGARVVIANRTY  414 (616)
Q Consensus       381 ~k~vlVl--GAGGagrAia~~L~~~G~~V~v~nRt~  414 (616)
                      ++.++|+  |+|-+|-.+|..|+++|++|+++.|..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            5778887  777899999999999999999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=82.01  E-value=0.64  Score=44.27  Aligned_cols=30  Identities=23%  Similarity=0.377  Sum_probs=27.2

Q ss_pred             EEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 007151          383 LFVVIGA-GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       383 ~vlVlGA-GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      ||||+|+ |-+|+.++..|.+.|++|+.++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            7999998 67999999999999999998864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=81.80  E-value=0.35  Score=46.20  Aligned_cols=31  Identities=16%  Similarity=0.293  Sum_probs=26.4

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEE
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIAN  411 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~n  411 (616)
                      .|||||+|+ |-+|++++.+|.+.|..+.++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~   33 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLR   33 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEec
Confidence            478999998 7799999999999999665553

>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: AAA domain of cell division protein FtsH
species: Escherichia coli [TaxId: 562]

Probab=81.70  E-value=0.2  Score=47.80  Aligned_cols=29  Identities=7%  Similarity=-0.125  Sum_probs=26.5

Q ss_pred             ccceecccccCCccchhchhhhhhcCcee
Q 007151          540 FHIFTYFLFSFGNFSAEGTISENHGKVLV  568 (616)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (616)
                      -..+|+|=||+|||++.+.+|+.++.+++
T Consensus        46 ~~iLL~GppGtGKT~la~~iA~~~~~~~~   74 (256)
T d1lv7a_          46 KGVLMVGPPGTGKTLLAKAIAGEAKVPFF   74 (256)
T ss_dssp             CEEEEECCTTSCHHHHHHHHHHHHTCCEE
T ss_pred             CeEEeeCCCCCCccHHHHHHHHHcCCCEE
Confidence            35889999999999999999999999885

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.69  E-value=0.58  Score=39.71  Aligned_cols=37  Identities=24%  Similarity=0.361  Sum_probs=29.8

Q ss_pred             CCcEEEEEccch-----------hHHHHHHHHHHCCCeEEEEECCHHH
Q 007151          380 AGKLFVVIGAGG-----------AGKALAYGAKAKGARVVIANRTYDR  416 (616)
Q Consensus       380 ~~k~vlVlGAGG-----------agrAia~~L~~~G~~V~v~nRt~~k  416 (616)
                      ..|+|||+|+|+           ++--++.+|.+.|++++++|-+++.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T   53 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT   53 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh
Confidence            358999999983           4566778899999999999987653

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.40  E-value=0.67  Score=39.54  Aligned_cols=113  Identities=17%  Similarity=0.127  Sum_probs=65.7

Q ss_pred             CCcEEEEEccc----hhHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHCCcccchhcccccCCCCccEEEEcCCCCCCC
Q 007151          380 AGKLFVVIGAG----GAGKALAYGAKAKGARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQP  455 (616)
Q Consensus       380 ~~k~vlVlGAG----GagrAia~~L~~~G~~V~v~nRt~~ka~~la~~~~~~~~~~~~l~~~~~~~~divInat~~gm~p  455 (616)
                      +-|++.|+||+    -.|..++..|.+.|+++++++-++.. +    +..+.. .+.++.+ .....|+++-++|....+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~----~i~g~~-~~~~l~~-i~~~iD~v~v~~p~~~v~   84 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-E----ELFGEE-AVASLLD-LKEPVDILDVFRPPSALM   84 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-S----EETTEE-CBSSGGG-CCSCCSEEEECSCHHHHT
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-c----eeecee-cccchhh-ccCCCceEEEeccHHHHH
Confidence            35789999985    68999999999999999999865321 0    011111 1222333 234579999888854332


Q ss_pred             CCCCCccccccc--cCccEEEEEeeCCcccHHHHHHHHcCCeEEcc-HHHHHHH
Q 007151          456 KVDETPIPKHAL--GHYALVFDAVYTPKITRLLREAEESGATIVSG-LEMFIGQ  506 (616)
Q Consensus       456 ~~~~~pi~~~~l--~~~~~v~Di~Y~P~~T~ll~~A~~~G~~~i~G-l~MLv~Q  506 (616)
                      .     +-++..  ....+++  .-.-..-.+.+.|++.|+.++.+ --|..+|
T Consensus        85 ~-----~v~~~~~~g~k~i~~--q~G~~~~e~~~~a~~~Gi~vV~~~C~~ie~~  131 (136)
T d1iuka_          85 D-----HLPEVLALRPGLVWL--QSGIRHPEFEKALKEAGIPVVADRCLMVEHK  131 (136)
T ss_dssp             T-----THHHHHHHCCSCEEE--CTTCCCHHHHHHHHHTTCCEEESCCHHHHHH
T ss_pred             H-----HHHHHHhhCCCeEEE--ecCccCHHHHHHHHHcCCEEEcCCccHHHHH
Confidence            2     111111  1112211  11112456788999999997765 5555555

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.92  E-value=0.86  Score=37.26  Aligned_cols=33  Identities=27%  Similarity=0.256  Sum_probs=27.7

Q ss_pred             CcEEEEEccchhHHHHHHHHHH---CCCeEEEEECC
Q 007151          381 GKLFVVIGAGGAGKALAYGAKA---KGARVVIANRT  413 (616)
Q Consensus       381 ~k~vlVlGAGGagrAia~~L~~---~G~~V~v~nRt  413 (616)
                      .|+++|+|+|.+|-.+|..|.+   .|.+|+++.|.
T Consensus        18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~   53 (117)
T d1feca2          18 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRG   53 (117)
T ss_dssp             CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred             CCeEEEECCChHHHHHHHHhHhhcccccccceeccc
Confidence            4799999999999998876655   47799999885

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=80.81  E-value=0.41  Score=46.65  Aligned_cols=32  Identities=19%  Similarity=0.103  Sum_probs=26.5

Q ss_pred             CcEEEEEcc-chhHHHHHHHHHHCCCeEEEEEC
Q 007151          381 GKLFVVIGA-GGAGKALAYGAKAKGARVVIANR  412 (616)
Q Consensus       381 ~k~vlVlGA-GGagrAia~~L~~~G~~V~v~nR  412 (616)
                      .|+|||+|| |-+|+.++..|.+.|.+|.+++|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~   34 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   34 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE
Confidence            478999997 77999999999999986555544

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.62  E-value=0.41  Score=46.11  Aligned_cols=35  Identities=26%  Similarity=0.396  Sum_probs=30.3

Q ss_pred             CCcEEEEEccchhHHHHHHHHHHC--CCeEEEEECCH
Q 007151          380 AGKLFVVIGAGGAGKALAYGAKAK--GARVVIANRTY  414 (616)
Q Consensus       380 ~~k~vlVlGAGGagrAia~~L~~~--G~~V~v~nRt~  414 (616)
                      .++.|+|+|+|.+|.++|+.|++.  |.+|+|+.++.
T Consensus        49 ~~~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~   85 (311)
T d2gjca1          49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV   85 (311)
T ss_dssp             TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCC
Confidence            356799999999999999999964  88999998863

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=80.47  E-value=0.67  Score=42.90  Aligned_cols=72  Identities=24%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             cCC-cEEEEEccchhHHHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHCCcccc--hhcccccCCCCccEEEEcC
Q 007151          379 LAG-KLFVVIGAGGAGKALAYGAKAK------GARVVIANRTYDRARELAETVGGHALS--LADLENFNPEDGMILANTT  449 (616)
Q Consensus       379 l~~-k~vlVlGAGGagrAia~~L~~~------G~~V~v~nRt~~ka~~la~~~~~~~~~--~~~l~~~~~~~~divInat  449 (616)
                      ++| |++.|+|-|-=|+|=|..|.+.      |.+|.|--|...+..+.|+.-+-...+  +-++.+ ....+|+|...+
T Consensus        41 ~kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~E-Av~~ADiVmiLl  119 (226)
T d1qmga2          41 FKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWE-TISGSDLVLLLI  119 (226)
T ss_dssp             TTTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHH-HHHTCSEEEECS
T ss_pred             hcCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHH-HHhhCCEEEEec
Confidence            456 8999999999999999999994      467888888666655666655543211  111111 223478988888


Q ss_pred             CC
Q 007151          450 SI  451 (616)
Q Consensus       450 ~~  451 (616)
                      |-
T Consensus       120 PD  121 (226)
T d1qmga2         120 SD  121 (226)
T ss_dssp             CH
T ss_pred             ch
Confidence            74

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.39  E-value=0.74  Score=40.93  Aligned_cols=31  Identities=10%  Similarity=0.089  Sum_probs=27.8

Q ss_pred             EEEEEccchhHHHHHHHHHHCCC--eEEEEECC
Q 007151          383 LFVVIGAGGAGKALAYGAKAKGA--RVVIANRT  413 (616)
Q Consensus       383 ~vlVlGAGGagrAia~~L~~~G~--~V~v~nRt  413 (616)
                      ||+|+|+|-+|-.+|..|.+.+.  +|+++.|+
T Consensus         2 KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            69999999999999999998865  89999875