Citrus Sinensis ID: 007174

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610----
MGIFEEMGFCGNLEFFSALPGEGEAVMGHEMETAVEEDCSDEEVDVDELERRMWRDRLLLKRLKEQNKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPASTGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFNMGAMGSRDRLMMPPSLVPRIKGEVFETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccHHHccccccccHccccccccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHccEcccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccEEEccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEc
mgifeemgfcgnleffsalpgegeavmghemetaveedcsdeevdvDELERRMWRDRLLLKRLKEqnkskegvdsakHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGfvygiipekgkpvtgasdNLRAWWKEKVRFDRNGPAAIAKYqadhaipgknedfgtvvstphtlqelqDTTLGSLLSALMqhcnppqrrfplekgvappwwptgteewwpelglpkdqgpppykkphdlkkawKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEAlsrklypdscipastggsgsfiisdisdydvegvdnernveveeikpleanlfnmgamgsrdrlmmppslvprikgevfeTHSESIQKRrqsadephmtidqkiytceftqcpyndyhhgfldrtsrnnhqlncpyrnngsqgcvmpnfqinndqpavfslpfaqsthpkpitsvknqtqpqynvsglglpddgQKMISDLMSFydtnlqpnksmsqgclnvtedrnqqpeqQKFQLQLDdsfynqgvgvmkggnmpvnnpvfsstevhfdqckafdspfdnnpgdniaefrfnspfniasvdypmdpipkqdvsmwyl
MGIFEEMGFCGNLEFFSALPGEGEAVMGHEMEtaveedcsdeevdvdelerrMWRDRLllkrlkeqnkskegvdsakhrqsqeqarrkkMSRAQDGILKYMLKMMEVCKAQGFVYGiipekgkpvtgasdNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPASTGGSGSFIISDISDYDVEGVDNERnveveeikpleanlfNMGAMGSRDRLMMPPSLVPRIKGEVFETHSEsiqkrrqsadephmTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPItsvknqtqpqyNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
MGIFEEMGFCGNLEFFSALPGEGEAVMGHEMETAveedcsdeevdvdeleRRMWRDRLLLKRLKEQNKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAppwwptgteewwpeLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPAstggsgsfiisdisdydVEGVDNERNVEVEEIKPLEANLFNMGAMGSRDRLMMPPSLVPRIKGEVFETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNqqpeqqkfqlqLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
***FEEMGFCGNLEFFSALPG*******************************MWRDRLL************************************GILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGL**************LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPASTGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFN********************************************TIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSL******************************************************************************DDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDN**GDNIAEFRFNSPFNIASVDYP**************
**IFEEMGFCGNLEFFSALP*************************VDELERRMWRD*****************************************LKYMLKMMEVCKAQGFVYGIIPEKG************WWKEKVRFDRNGPAA*A***********************TLQELQDTTLGSLLSALMQHCNP*********GVAPPWWPTGTEEWWPELGL***********PHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQ**CL***MTAKESATWLAIINQEEA****************************YDVEGVDN*******************************************************************IYTCEFTQCPYNDY****L*RTSRNNHQLN**********************************************************DDGQKMISDLMSFYDT****************************************************************QCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQ***MWYL
MGIFEEMGFCGNLEFFSALPGEGEAVMGHEM*************DVDELERRMWRDRLLLKRLKE***************************AQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPASTGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFNMGAMGSRDRLMMPPSLVPRIKGEVFE***************PHMTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
*********CGNLEFFSAL*****************EDCSDEEVDVDELERRMWRDRLLLKRLKEQNK**********************SRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPG********VSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPA************ISDYDVEGVD***************************RLMMP*******KGEV*ETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGS**CVMPN******QPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
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MGIFEEMGFCGNLEFFSALPGEGEAVMGHEMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCIPASTGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFNMGAMGSRDRLMMPPSLVPRIKGEVFETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFLDRTSRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYNQGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYPMDPIPKQDVSMWYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query614 2.2.26 [Sep-21-2011]
O24606628 Protein ETHYLENE INSENSIT yes no 0.793 0.775 0.633 1e-178
Q9SLH0584 ETHYLENE INSENSITIVE 3-li no no 0.789 0.830 0.612 1e-166
O23116567 ETHYLENE INSENSITIVE 3-li no no 0.465 0.504 0.603 1e-106
O23115518 ETHYLENE INSENSITIVE 3-li no no 0.617 0.731 0.470 1e-93
Q9FJQ5557 ETHYLENE INSENSITIVE 3-li no no 0.625 0.689 0.444 6e-93
Q9LX16471 Putative ETHYLENE INSENSI no no 0.431 0.562 0.613 9e-93
>sp|O24606|EIN3_ARATH Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1 Back     alignment and function desciption
 Score =  624 bits (1608), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 325/513 (63%), Positives = 393/513 (76%), Gaps = 26/513 (5%)

Query: 3   IFEEMGFCGNLEFFSALPGEGEA----VMGHEMETAVEEDCSDEEVDVDELERRMWRDRL 58
           +F EMG CGN++FFS+    GE     V   E ++ VE+D +D+E+DVDELERRMWRD++
Sbjct: 2   MFNEMGMCGNMDFFSS-GSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKM 60

Query: 59  LLKRLKEQNKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII 118
            LKRLKEQ+K KEGVD+AK RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII
Sbjct: 61  RLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII 120

Query: 119 PEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQE 178
           PE GKPVTGASDNLR WWK+KVRFDRNGPAAI KYQA++ IPG +E    +  TPHTLQE
Sbjct: 121 PENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQE 180

Query: 179 LQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKP 238
           LQDTTLGSLLSALMQHC+PPQRRFPLEKGV PPWWP G E+WWP+LGLPKDQGP PYKKP
Sbjct: 181 LQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKP 240

Query: 239 HDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSR 298
           HDLKKAWKVGVLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE+L+R
Sbjct: 241 HDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLAR 300

Query: 299 KLYPDSCIPAS-TGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFNMGAMGSRD 357
           +LYP+SC P S +GGS S +++D S YDVEG + E + EVEE+KP    + N    G   
Sbjct: 301 ELYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKP--EKVMNSSNFGMVA 358

Query: 358 RLMMPPSLVPRIKGEVFETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFL 417
           ++   P     +K EV   +SE ++KR+ + D  +  +D+ ++TCE   C +++   GFL
Sbjct: 359 KMHDFP-----VKEEVPAGNSEFMRKRKPNRDL-NTIMDRTVFTCENLGCAHSEISRGFL 412

Query: 418 DRTSRNNHQLNCPYRNNG-SQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQP 476
           DR SR+NHQL CP+R++    G     F +N  +P V    F Q   P+P+ SV    QP
Sbjct: 413 DRNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVV---GFPQ---PRPVNSV---AQP 463

Query: 477 QYNVSGLGLPDDGQKMISDLMSFYDTNLQPNKS 509
             +++G+ +P+DGQKMIS+LMS YD N+Q N++
Sbjct: 464 -IDLTGI-VPEDGQKMISELMSMYDRNVQSNQT 494
Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1 Back     alignment and function description
>sp|O23116|EIL3_ARATH ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1 Back     alignment and function description
>sp|O23115|EIL2_ARATH ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJQ5|EIL5_ARATH ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX16|EIL4_ARATH Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query614
297382802614 ethylene-insensitive 3-like 1 protein [C 1.0 1.0 0.951 0.0
225465369616 PREDICTED: protein ETHYLENE INSENSITIVE 0.986 0.983 0.786 0.0
224097500603 ethylene-insensitive 3d [Populus trichoc 0.973 0.991 0.746 0.0
224110058603 ethylene-insensitive 3c [Populus trichoc 0.973 0.991 0.743 0.0
15425735615 EIN3-like protein [Cucumis melo] 0.988 0.986 0.707 0.0
449446335615 PREDICTED: protein ETHYLENE INSENSITIVE 0.988 0.986 0.705 0.0
117549810601 EIL2 [Prunus persica] 0.965 0.986 0.706 0.0
292669001625 ethylene insensitive 3 class transcripti 0.978 0.961 0.671 0.0
292668999611 ethylene insensitive 3 class transcripti 0.975 0.980 0.677 0.0
292668997659 ethylene insensitive 3 class transcripti 0.975 0.908 0.637 0.0
>gi|297382802|gb|ADI40102.1| ethylene-insensitive 3-like 1 protein [Citrus sinensis] Back     alignment and taxonomy information
 Score = 1211 bits (3134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/614 (95%), Positives = 599/614 (97%)

Query: 1   MGIFEEMGFCGNLEFFSALPGEGEAVMGHEMETAVEEDCSDEEVDVDELERRMWRDRLLL 60
           MGIFEEMGFCGNLEFFS+  GEGEA + HE ETA EED SDEE+DVDELERRMWRDR+LL
Sbjct: 1   MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEHETAAEEDYSDEELDVDELERRMWRDRMLL 60

Query: 61  KRLKEQNKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120
           K+LKEQ+KSKE VDSAK RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE
Sbjct: 61  KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120

Query: 121 KGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQ 180
           KGKPV+GASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNED G+VVSTPH+LQELQ
Sbjct: 121 KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDCGSVVSTPHSLQELQ 180

Query: 181 DTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHD 240
           DTTLGSLLSALMQHC+PPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHD
Sbjct: 181 DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHD 240

Query: 241 LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKL 300
           LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKL
Sbjct: 241 LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKL 300

Query: 301 YPDSCIPASTGGSGSFIISDISDYDVEGVDNERNVEVEEIKPLEANLFNMGAMGSRDRLM 360
           YPDSC+PASTGGSGSFIISDISDYDVEGVDNER+VEVEEIKPLEANLFNMGAMGSRDR M
Sbjct: 301 YPDSCLPASTGGSGSFIISDISDYDVEGVDNERDVEVEEIKPLEANLFNMGAMGSRDRFM 360

Query: 361 MPPSLVPRIKGEVFETHSESIQKRRQSADEPHMTIDQKIYTCEFTQCPYNDYHHGFLDRT 420
           MPPSLVPRIKGEVFETHSESIQKRR SADEPHMT+DQKIYTCEF QCPYNDYHHGFLDRT
Sbjct: 361 MPPSLVPRIKGEVFETHSESIQKRRPSADEPHMTMDQKIYTCEFPQCPYNDYHHGFLDRT 420

Query: 421 SRNNHQLNCPYRNNGSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITSVKNQTQPQYNV 480
           SRNNHQLNCPYRNN SQGCVMPNFQINNDQPAVFSLPFAQSTHPKPIT VKNQTQPQYNV
Sbjct: 421 SRNNHQLNCPYRNNSSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITPVKNQTQPQYNV 480

Query: 481 SGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYN 540
           SGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYN
Sbjct: 481 SGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYN 540

Query: 541 QGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNIASVDYP 600
           QGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFN+ASV+YP
Sbjct: 541 QGVGVMKGGNMPVNNPVFSSTEVHFDQCKAFDSPFDNNPGDNIAEFRFNSPFNVASVNYP 600

Query: 601 MDPIPKQDVSMWYL 614
           MDPIPKQDVSMWYL
Sbjct: 601 MDPIPKQDVSMWYL 614

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225465369|ref|XP_002276380.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224097500|ref|XP_002310961.1| ethylene-insensitive 3d [Populus trichocarpa] gi|222850781|gb|EEE88328.1| ethylene-insensitive 3d [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224110058|ref|XP_002315400.1| ethylene-insensitive 3c [Populus trichocarpa] gi|222864440|gb|EEF01571.1| ethylene-insensitive 3c [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15425735|dbj|BAB64345.1| EIN3-like protein [Cucumis melo] Back     alignment and taxonomy information
>gi|449446335|ref|XP_004140927.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 1 [Cucumis sativus] gi|449446337|ref|XP_004140928.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|117549810|gb|ABK35086.1| EIL2 [Prunus persica] Back     alignment and taxonomy information
>gi|292669001|gb|ADE41155.1| ethylene insensitive 3 class transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|292668999|gb|ADE41154.1| ethylene insensitive 3 class transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|292668997|gb|ADE41153.1| ethylene insensitive 3 class transcription factor [Malus x domestica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query614
TAIR|locus:2059247584 EIL1 "ETHYLENE-INSENSITIVE3-li 0.697 0.732 0.596 1.5e-136
TAIR|locus:2091906628 EIN3 "ETHYLENE-INSENSITIVE3" [ 0.977 0.955 0.478 7.7e-135
TAIR|locus:2178988518 EIL2 "ETHYLENE-INSENSITIVE3-li 0.399 0.472 0.561 3.6e-84
TAIR|locus:2027754567 EIL3 "ETHYLENE-INSENSITIVE3-li 0.407 0.440 0.636 8.2e-83
TAIR|locus:2184088471 AT5G10120 [Arabidopsis thalian 0.397 0.518 0.593 8.3e-83
TAIR|locus:2171815557 AT5G65100 [Arabidopsis thalian 0.405 0.447 0.552 1.5e-77
TAIR|locus:2059247 EIL1 "ETHYLENE-INSENSITIVE3-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1251 (445.4 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
 Identities = 265/444 (59%), Positives = 309/444 (69%)

Query:     1 MGIFEEMGFCGNLEFFSALPGEGEAVMGH-EME-TAXXXXXXXXXXXXXXXXRRMWRDRL 58
             M +F EMG  GN++FFS+        +   E E                   +RMWRD++
Sbjct:     1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKM 60

Query:    59 LLKRLKEQ-NKSKEGVDSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 117
              LKRLKEQ +K KEGVD +K RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI
Sbjct:    61 RLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 120

Query:   118 IPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVS-TPHTL 176
             IPEKGKPVTGASDNLR WWK+KVRFDRNGPAAIAKYQ+++ I G + D  ++V  TPHTL
Sbjct:   121 IPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTL 180

Query:   177 QELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAXXXXXXXXXXXXXXLGLPKDQGPPPYK 236
             QELQDTTLGSLLSALMQHC+PPQRRFPLEKGV+              LGLP +QGPPPYK
Sbjct:   181 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYK 240

Query:   237 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEAL 296
             KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE +
Sbjct:   241 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVV 300

Query:   297 SRKLYPDSCIPAXXXXXXXXXXXXX---XXXXVEGVDNERN-VEVEEIKPLEANLFNMGA 352
             +R+LYP+SC P                     VEG + E++  +VEE KP    +  + +
Sbjct:   301 ARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHGFDVEERKPEIVMMHPLAS 360

Query:   353 MGSRDRLMMPPSLVPRIKGEVFET-HSESIQKRRQSADEPHMTIDQKI-YTCEFTQCPYN 410
              G       P      IK EV  T + E  +KR+Q+ D   M +D+   YTCE  QCP++
Sbjct:   361 FGVAKMQHFP------IKEEVATTVNLEFTRKRKQNNDMNVMVMDRSAGYTCENGQCPHS 414

Query:   411 DYHHGFLDRTSRNNHQLNCPYRNN 434
               + GF DR+SR+NHQ+ CPYR+N
Sbjct:   415 KMNLGFQDRSSRDNHQMVCPYRDN 438
GO:0005634 "nucleus" evidence=ISM;IEA
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS
GO:0009723 "response to ethylene stimulus" evidence=IMP
GO:0009873 "ethylene mediated signaling pathway" evidence=TAS
GO:0042742 "defense response to bacterium" evidence=IGI
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0005515 "protein binding" evidence=IPI
TAIR|locus:2091906 EIN3 "ETHYLENE-INSENSITIVE3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178988 EIL2 "ETHYLENE-INSENSITIVE3-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027754 EIL3 "ETHYLENE-INSENSITIVE3-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184088 AT5G10120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171815 AT5G65100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O24606EIN3_ARATHNo assigned EC number0.63350.79310.7754yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query614
PLN03109599 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 pr 1e-162
pfam04873332 pfam04873, EIN3, Ethylene insensitive 3 1e-107
>gnl|CDD|215581 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 protein; Provisional Back     alignment and domain information 
 Score =  476 bits (1226), Expect = e-162
 Identities = 199/333 (59%), Positives = 248/333 (74%), Gaps = 22/333 (6%)

Query: 32  ETAVEEDCSDEEVDVDELERRMWRDRLLLKRLKEQNK--SKEGVDSAKHRQSQEQARRKK 89
           +   E D SDEE++ ++LERRMW+DR+ LKR+KE+ K   +  ++ +K ++  +QARRKK
Sbjct: 25  DNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKK 84

Query: 90  MSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAA 149
           MSRAQDGILKYMLK+MEVCKA+GFVYGIIPEKGKPV+GASDN+RAWWKEKV+FD+NGPAA
Sbjct: 85  MSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAA 144

Query: 150 IAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVA 209
           IAKY+A+    G+ E  G   ++ H+LQ+LQD TLGSLLS+LMQHC+PPQR++PLEKGV 
Sbjct: 145 IAKYEAECLAMGEAESSG--NNSQHSLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVP 202

Query: 210 PPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVR 269
           PPWWP+G E+WW +LGLPK Q  PPYKKPHDLKK WKVGVLTAVIKHMSPD  KIR+ VR
Sbjct: 203 PPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHVR 261

Query: 270 QSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSCI-------PASTGGSGSFIISDIS 322
           QSKCLQDKMTAKES  WL ++N+EE+L R+   D+                    IS  S
Sbjct: 262 QSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDS 321

Query: 323 DYDVEGV----------DNERNVEVEEIKPLEA 345
           DYDV+G+          D+ RN++    +P  A
Sbjct: 322 DYDVDGLEDAPGSVSSKDDRRNLQPVAQEPERA 354

Length = 599
>gnl|CDD|218302 pfam04873, EIN3, Ethylene insensitive 3 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 614
PLN03109599 ETHYLENE-INSENSITIVE3-like3 protein; Provisional 100.0
PF04873354 EIN3: Ethylene insensitive 3; InterPro: IPR006957 100.0
PF11001126 DUF2841: Protein of unknown function (DUF2841); In 97.01
>PLN03109 ETHYLENE-INSENSITIVE3-like3 protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3e-148  Score=1163.59  Aligned_cols=301  Identities=64%  Similarity=1.115  Sum_probs=280.3

Q ss_pred             cccccccCccccCCHHHHHHhhhhhhHHHHHhhhhhcccccc--ccccccccHHHHHHhhhhhhhhhHHHHHHHHHHHHh
Q 007174           32 ETAVEEDCSDEEVDVDELERRMWRDRLLLKRLKEQNKSKEGV--DSAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCK  109 (614)
Q Consensus        32 ~~~~e~~~sdeei~~~eL~~rmWkDr~~lkrlke~~~~~~~~--~~~~~~~~~eq~rrKkMsRAQDgiLkyMlKmMEvC~  109 (614)
                      ++++|+|+||||||+||||||||||||+||||||++|..+..  +..|+++++||||||||+||||||||||||||||||
T Consensus        25 ~~~~~~~~sdeei~~~el~rrmwkd~~~l~rlke~~~~~~~~~~e~~~~~~~~~~arrkkm~raqdgilkymlk~me~c~  104 (599)
T PLN03109         25 DNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKKMSRAQDGILKYMLKLMEVCK  104 (599)
T ss_pred             CCCcccccccccCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999998875443  477889999999999999999999999999999999


Q ss_pred             hccceeeeccCCCccccCCChhhHHHHhhhhcccccchhhhhhhhhccCCCCCCCCCCcccCccchhhhcchhhhhhHHH
Q 007174          110 AQGFVYGIIPEKGKPVTGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDFGTVVSTPHTLQELQDTTLGSLLS  189 (614)
Q Consensus       110 aqGFVYGIIpekGkPvsGaSdnlR~WWKekVrFDrngPaAiaky~~~~~~~~~~~~~~~~~~~~h~L~~LqDtTLgsllS  189 (614)
                      ||||||||||||||||||||||||+|||||||||||||||||||++||++++.++....  +++|+|+||||||||||||
T Consensus       105 a~gfvygiipekgkpvsg~sd~lr~wwk~~v~fd~~gp~ai~ky~~~~~~~~~~~~~~~--~~~~~l~~lqd~tLgslls  182 (599)
T PLN03109        105 ARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMGEAESSGN--NSQHSLQDLQDATLGSLLS  182 (599)
T ss_pred             hcceeEEeccCCCCCCCCCchHHHHHHHHhcccccccHHHHHHhhhhcccccccccCCc--ccHHHHHHHHHhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888765553  8999999999999999999


Q ss_pred             HhhhcCCCCccCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcchhhhhhhhhhhhhhhccCcCHHHHHHHHH
Q 007174          190 ALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVR  269 (614)
Q Consensus       190 aLmqHC~PpQRr~PlekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkPhdLkKawKV~VLtAVIKHmsPd~~kir~lVr  269 (614)
                      ||||||+|||||||||||+||||||||+|+||++||+|++++ |||||||||||||||||||||||||||||+|||+|||
T Consensus       183 almqhC~Ppqr~~plekg~~PPWWPtg~E~WW~~~g~~~~~~-pPykkphdLkK~wKv~vl~avikhmsPd~~kir~~vr  261 (599)
T PLN03109        183 SLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHVR  261 (599)
T ss_pred             HHHhhcCChhhcCCCCCCCCCCCCCCCCcchhhhcCCCCCCC-CCCCCchhhhhHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence            999999999999999999999999999999999999999865 9999999999999999999999999999999999999


Q ss_pred             hhccccchhhHHhHhHHHHHHhhHHHhhhhcCCCCC-------CCCCCCCCCcccccCCCcccccccccccch
Q 007174          270 QSKCLQDKMTAKESATWLAIINQEEALSRKLYPDSC-------IPASTGGSGSFIISDISDYDVEGVDNERNV  335 (614)
Q Consensus       270 qSkclqdKmTakEs~tWl~vl~qEE~l~r~l~p~~~-------p~~s~~g~~~~~~~~~~eYDV~g~~~~~~~  335 (614)
                      ||||||||||||||+||++||+|||+|++++..+..       |+.+.++....++|+++||||||+||.+..
T Consensus       262 ~Sk~lqdkmtakEs~~W~~vl~~Ee~~~~~~s~DNGtS~ITe~P~g~~~~rk~~~~SSdsdYDVDg~eD~~gS  334 (599)
T PLN03109        262 QSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDSDYDVDGLEDAPGS  334 (599)
T ss_pred             hchhHHhhhhHHHHHHHHHHHHHHHHHhcccCCCCCccccccCCCCccccCCCCCcCCCcccccccccCCCCC
Confidence            999999999999999999999999999999877653       232344455668899999999999998754

>PF04873 EIN3: Ethylene insensitive 3; InterPro: IPR006957 Ethylene insensitive 3 (EIN3) proteins are a family of plant DNA-binding proteins that regulate transcription in response to the gaseous plant hormone ethylene, and are essential for ethylene-mediated responses Back     alignment and domain information
>PF11001 DUF2841: Protein of unknown function (DUF2841); InterPro: IPR021264 This family of proteins with unknown function are all present in yeast Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query614
1wij_A140 Solution Structure Of The Dna-Binding Domain Of Eth 1e-43
>pdb|1WIJ|A Chain A, Solution Structure Of The Dna-Binding Domain Of Ethylene- Insensitive3-Like3 Length = 140 Back     alignment and structure 
Iteration: 1

 Score =  174 bits (441), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
Query: 175 TLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAXXXXXXXXXXXXXXLGLPKDQGPPP 234
            LQ+LQD TLGSLLS+LMQHC+PPQR++PLEKG                LGLPK Q PP 
Sbjct: 11  VLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQSPP- 69
Query: 235 YKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE 294
           Y+KPHDLKK WKVGVLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLA++NQEE
Sbjct: 70  YRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEE 129
Query: 295 ALSRKLYPDS 304
           +L ++  P S
Sbjct: 130 SLIQQSGPSS 139

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query614
1wij_A140 Ethylene-insensitive3-like 3 protein; DNA-binding 7e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Length = 140 Back     alignment and structure
 Score =  239 bits (611), Expect = 7e-77
 Identities = 98/134 (73%), Positives = 113/134 (84%), Gaps = 1/134 (0%)

Query: 171 STPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQ 230
            +   LQ+LQD TLGSLLS+LMQHC+PPQR++PLEKG  PPWWPTG EEWW +LGLPK Q
Sbjct: 7   GSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQ 66

Query: 231 GPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAII 290
             PPY+KPHDLKK WKVGVLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLA++
Sbjct: 67  -SPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVL 125

Query: 291 NQEEALSRKLYPDS 304
           NQEE+L ++  P S
Sbjct: 126 NQEESLIQQSGPSS 139
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query614
1wij_A140 Ethylene-insensitive3-like 3 protein; DNA-binding 100.0
>1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Back     alignment and structure
Probab=100.00  E-value=1.6e-81  Score=568.21  Aligned_cols=138  Identities=71%  Similarity=1.232  Sum_probs=126.5

Q ss_pred             CCcccCccchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcchhhhh
Q 007174          166 FGTVVSTPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAW  245 (614)
Q Consensus       166 ~~~~~~~~h~L~~LqDtTLgsllSaLmqHC~PpQRr~PlekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkPhdLkKaw  245 (614)
                      +++.++++|+|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|++++|+ |||||||||||||
T Consensus         2 ~~~~~~~~h~L~~Lqd~TLgsllsaLmqhC~PPQR~~Plekg~~PPWWPtG~E~WW~~lGl~~~~~-PPYkkPhdLkKaw   80 (140)
T 1wij_A            2 SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMW   80 (140)
T ss_dssp             ------CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHH
T ss_pred             CccccccHHHHHHHHHHhHHHHHHHHHhhCCCchhcCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCCchhhhHHH
Confidence            456789999999999999999999999999999999999999999999999999999999999998 9999999999999


Q ss_pred             hhhhhhhhhhccCcCHHHHHHHHHhhccccchhhHHhHhHHHHHHhhHHHhhhhcCCCC
Q 007174          246 KVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKLYPDS  304 (614)
Q Consensus       246 KV~VLtAVIKHmsPd~~kir~lVrqSkclqdKmTakEs~tWl~vl~qEE~l~r~l~p~~  304 (614)
                      ||+|||||||||||||+|||+|||||||||||||||||+||++||||||+++|+++|+.
T Consensus        81 KV~VLtAVIKHmsPd~~kir~lVrqSk~lqdKmTakEs~~W~~vl~~Ee~~~~~~~p~~  139 (140)
T 1wij_A           81 KVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQSGPSS  139 (140)
T ss_dssp             HHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC-----
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHhhhhHHhhhhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999874

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 614
d1wija_127 a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like 4e-82
>d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 127 Back     information, alignment and structure

class: All alpha proteins
fold: LEM/SAP HeH motif
superfamily: DNA-binding domain of EIN3-like
family: DNA-binding domain of EIN3-like
domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  251 bits (643), Expect = 4e-82
 Identities = 96/126 (76%), Positives = 110/126 (87%), Gaps = 1/126 (0%)

Query: 174 HTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPP 233
             LQ+LQD TLGSLLS+LMQHC+PPQR++PLEKG  PPWWPTG EEWW +LGLPK Q  P
Sbjct: 3   FVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQ-SP 61

Query: 234 PYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQE 293
           PY+KPHDLKK WKVGVLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLA++NQE
Sbjct: 62  PYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQE 121

Query: 294 EALSRK 299
           E+L ++
Sbjct: 122 ESLIQQ 127

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query614
d1wija_127 Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 100.0
>d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All alpha proteins
fold: LEM/SAP HeH motif
superfamily: DNA-binding domain of EIN3-like
family: DNA-binding domain of EIN3-like
domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-79  Score=544.15  Aligned_cols=127  Identities=76%  Similarity=1.341  Sum_probs=124.4

Q ss_pred             ccchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCcchhhhhhhhhhh
Q 007174          172 TPHTLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHDLKKAWKVGVLT  251 (614)
Q Consensus       172 ~~h~L~~LqDtTLgsllSaLmqHC~PpQRr~PlekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkPhdLkKawKV~VLt  251 (614)
                      +.|.|+||||||||||||||||||+|||||||||||+||||||||+|+||++||++++++ |||||||||||||||||||
T Consensus         1 ~~~~L~~LqD~TLgsllsaLmqhC~PPQR~~Plekg~pPPWWPtG~E~WW~~lg~~~~~~-PPYkkPhdLkKawKv~vL~   79 (127)
T d1wija_           1 SQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLT   79 (127)
T ss_dssp             CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCChHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999999999999999998 7999999999999999999


Q ss_pred             hhhhccCcCHHHHHHHHHhhccccchhhHHhHhHHHHHHhhHHHhhhh
Q 007174          252 AVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRK  299 (614)
Q Consensus       252 AVIKHmsPd~~kir~lVrqSkclqdKmTakEs~tWl~vl~qEE~l~r~  299 (614)
                      ||||||||||+|||+|||||||||||||||||+||++||+|||+|+++
T Consensus        80 aVIKHmsPd~~kir~lVr~sk~lqdkmTakEs~~W~~vl~~Ee~l~~~  127 (127)
T d1wija_          80 AVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQ  127 (127)
T ss_dssp             HHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC
T ss_pred             HHHHHhCCcHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhHHHHhcC
Confidence            999999999999999999999999999999999999999999999874