Citrus Sinensis ID: 007221

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--

MSAAAKTARSRAAAAAENGGAKIEEGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDSLKGSESFASKNDLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQASSMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLNQANYKDDPRRRHSDRQNRNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRKGQSL

ccccccHHHHHHHHHHccccccHHHHccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccc

cccccHcHcccccccccccccHHHHcccEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcc

MSAAAKTARSRAAAAAENGGAKIEEGlnlfksdkfdadvyvkskcslNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEgvhidslkgsesfaskndllnlenkepsdlekwsvefPDLLDVLLAERRIDEALTALDEGEHLAAEAKqtktldpaMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKlgdgprahsLLLNAHYQRYQYsmqslrpsstsyggaYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADdwvltyppmgtrqaSSMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKAlpgsmeeeanfegsGNKIVRMAENEAQQIALLANASLLADEllpraamkvsplnqanykddprrrhsdrqnrnpeqrEWKRRLVISVDRLKDTFCRQHALDLiftedgdshlnADMYLnmdgnvdelewfpslifqKTKVFGMILRKGQSL

MSAAAKTARSRAaaaaenggakieeglnlfksdkFDADVYVKSkcslnekeiRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDSLKGSESFASKNDLLNLENKepsdlekwsvEFPDLLDVLLAERRIDEALTALDEGEHLAAeakqtktldpaMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQASSMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRaamkvsplnqanykddprrrhsdrqnrnpeqrewkrrlviSVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRKGQSL

MsaaaktarsraaaaaENGGAKIEEGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDSLKGSESFASKNDLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHalassaaagglraaaECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQASSMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLNQANYKDDPRRRHSDRQNRNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRKGQSL

*************************GLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDS************************EKWSVEFPDLLDVLLAERRIDEALTALDEGEHL********TLDPAMLISLENTIIDRRQKL*******************AAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSL****TSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGT*****MALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALP************************QQIALLANASLLADELL***********************************WKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMIL******

****************************LFKSDKFDADVYVK*************CSYLLDLKRASAEEMRKSVYANYAAFIRTSKEIS******************************************************LEKWSVEFPDLLDVLLAERRIDEALTALDEGEH**************MLISLENTIIDRRQKLAD******************AISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAAD*********************RLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALP****************VRMAENEAQQIALLANASLLADELLPRAAM*****************************EWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRK****

******************GGAKIEEGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDSLKGSESFASKNDLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLAD**************ELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHAL***********AAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQASSMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLNQANY******************REWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRKGQSL

***********************EEGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHID********************EPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPM******SMALQHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLN*****************RNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFPSLIFQKTKVFGMILRKGQS*

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		612	2.2.26 [Sep-21-2011]
Q54VZ8		815	Exocyst complex component	yes	no	0.562	0.422	0.194	4e-11
Q6PGF7		716	Exocyst complex component	yes	no	0.426	0.364	0.265	3e-10
Q5U247		685	Exocyst complex component	N/A	no	0.385	0.344	0.244	9e-10
Q5ZJ43		708	Exocyst complex component	yes	no	0.387	0.334	0.252	2e-09
Q8IYI6		725	Exocyst complex component	yes	no	0.387	0.326	0.254	3e-09
A4IF89		725	Exocyst complex component	yes	no	0.387	0.326	0.254	3e-09
O54924		716	Exocyst complex component	yes	no	0.426	0.364	0.261	4e-09
P0CN62		675	Exocyst complex component	yes	no	0.116	0.105	0.361	5e-05
P0CN63		675	Exocyst complex component	N/A	no	0.116	0.105	0.361	5e-05
Q5BFX0		666	Exocyst complex component	yes	no	0.316	0.291	0.214	0.0007

>sp\|Q54VZ8\|EXOC8_DICDI Exocyst complex component 8 OS=Dictyostelium discoideum GN=exoc8 PE=3 SV=2	Back alignment and function desciption

 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/365 (19%), Positives = 153/365 (41%), Gaps = 21/365 (5%)

Query: 30  FKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEIS 89
           F S+K+  D++        +++      YL + K    + ++K VY N+  FI  SKEI+
Sbjct: 115 FNSEKYVNDLFTHK----TDQQATVHLQYLENRKLGCIDHLKKDVYKNHLIFIGASKEIA 170

Query: 90  DLEGELSSIRNLLSTQATLIHGLAE-GVHIDSLKGSESFASKNDLLNLENKEP-SDLEKW 147
           + E ++   RNL+S    ++  L    +  D  K       K+  ++ E   P ++  +W
Sbjct: 171 NSEVDMLDFRNLISDYGNVMSSLQNISISWDHYK-----VKKSGKIDFEPLSPATEPIQW 225

Query: 148 SVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLA 207
               P+ L V + +R  + A+  +++   +     + + +       L++ I ++ + L 
Sbjct: 226 LTTAPNELSVSIEQREFEVAVGLVEKINKIYESNPKVEIVMQTH--PLKDQIENKVKILT 283

Query: 208 DQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYG 267
           D+L      P  +  +++  IS L +L    +A S+ L +       +++ +  S     
Sbjct: 284 DKLMNELRSPLLKANQIKDTISLLVRLSQNDKAKSIFLESRSHSINQAIKKIVFSGDL-- 341

Query: 268 GAYTAALSQLVFSAIAQAACDSLAIFGKETAYTSELVMWATRQTEAFAHLVKRHALASSA 327
             +   L++++F++I     D    F   +   S LV W   +    + +  R       
Sbjct: 342 NRFIGELARVIFNSINSTCNDFTNSFP--SYMNSGLVSWIIEELVLISDIFNRQVF---- 395

Query: 328 AAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMA 387
                 + ++ ++I   HC +++  GL++      L +P VEQ +     +I +S     
Sbjct: 396 ILDNFYSISQAIRIIESHCEMMDQTGLSIGFYWNLLLQPHVEQLIVNYEIKIRDSMLHQL 455

Query: 388 AADDW 392
             + W
Sbjct: 456 MDEKW 460

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Dictyostelium discoideum (taxid: 44689)

>sp\|Q6PGF7\|EXOC8_MOUSE Exocyst complex component 8 OS=Mus musculus GN=Exoc8 PE=1 SV=1	Back alignment and function description

>sp\|Q5U247\|EXOC8_XENLA Exocyst complex component 8 OS=Xenopus laevis GN=exoc8 PE=2 SV=1	Back alignment and function description

>sp\|Q5ZJ43\|EXOC8_CHICK Exocyst complex component 8 OS=Gallus gallus GN=EXOC8 PE=2 SV=1	Back alignment and function description

>sp\|Q8IYI6\|EXOC8_HUMAN Exocyst complex component 8 OS=Homo sapiens GN=EXOC8 PE=1 SV=2	Back alignment and function description

>sp\|A4IF89\|EXOC8_BOVIN Exocyst complex component 8 OS=Bos taurus GN=EXOC8 PE=2 SV=1	Back alignment and function description

>sp\|O54924\|EXOC8_RAT Exocyst complex component 8 OS=Rattus norvegicus GN=Exoc8 PE=1 SV=1	Back alignment and function description

>sp\|P0CN62\|EXO84_CRYNJ Exocyst complex component EXO84 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EXO84 PE=3 SV=1	Back alignment and function description

>sp\|P0CN63\|EXO84_CRYNB Exocyst complex component EXO84 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=EXO84 PE=3 SV=1	Back alignment and function description

>sp\|Q5BFX0\|EXO84_EMENI Exocyst complex component exo84 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=exo84 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		612
225443280		769	PREDICTED: exocyst complex component 8 [	0.972	0.773	0.830	0.0
255568053		761	conserved hypothetical protein [Ricinus	0.967	0.777	0.828	0.0
224110014		779	predicted protein [Populus trichocarpa]	0.985	0.774	0.810	0.0
356522153		769	PREDICTED: uncharacterized protein LOC10	0.955	0.760	0.811	0.0
356526324		768	PREDICTED: uncharacterized protein LOC10	0.975	0.777	0.797	0.0
224097468		768	predicted protein [Populus trichocarpa]	0.978	0.779	0.784	0.0
449447970		765	PREDICTED: uncharacterized protein LOC10	0.975	0.780	0.786	0.0
449515827		765	PREDICTED: uncharacterized LOC101213590	0.975	0.780	0.784	0.0
297795751		751	hypothetical protein ARALYDRAFT_495042 [	0.964	0.785	0.765	0.0
15240560		752	exocyst complex component 84B [Arabidops	0.964	0.784	0.763	0.0

>gi\|225443280\|ref\|XP_002273667.1\| PREDICTED: exocyst complex component 8 [Vitis vinifera]	Back alignment and taxonomy information

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/606 (83%), Positives = 551/606 (90%), Gaps = 11/606 (1%)

Query: 4   AAKTARSRAAAAA-ENGGAKIEEGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDL 62
           + K++RSR  AA  ENGGAK EE LN+FK+D FDAD Y++SKCSLNEKEIRQLCSYLLDL
Sbjct: 3   SVKSSRSRTVAAPRENGGAKFEENLNVFKTDHFDADSYLQSKCSLNEKEIRQLCSYLLDL 62

Query: 63  KRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVHIDSLK 122
           K+ASAEEMR+SVYANYAAFIRTSKEISDLEGEL SIRNLLSTQ+ LIHGLAEGV+IDSL 
Sbjct: 63  KKASAEEMRRSVYANYAAFIRTSKEISDLEGELLSIRNLLSTQSGLIHGLAEGVNIDSLS 122

Query: 123 GSESFAS-KNDLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEA 181
            + S +S  N L N E++EPSDLEKW +EFPDLLDVLLAERR+DEAL ALDEGE +AAEA
Sbjct: 123 ITVSESSTPNGLSNSEDREPSDLEKWLIEFPDLLDVLLAERRVDEALEALDEGERVAAEA 182

Query: 182 KQTKTLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAH 241
            + KTL P  L SL+  I +RRQKLADQLAEAACQPSTRG ELRAAISALKKLGDGPRAH
Sbjct: 183 IEMKTLSPDTLTSLQTAITERRQKLADQLAEAACQPSTRGNELRAAISALKKLGDGPRAH 242

Query: 242 SLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETAYTS 301
           +LLLNAHYQR+QY+MQSLRPSSTSYGGAYTAALSQLVFSAIAQAA DSLAIF KET+YTS
Sbjct: 243 TLLLNAHYQRFQYNMQSLRPSSTSYGGAYTAALSQLVFSAIAQAASDSLAIFSKETSYTS 302

Query: 302 ELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLI 361
           ELVMWAT+Q+EAFA LVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVL+
Sbjct: 303 ELVMWATKQSEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLL 362

Query: 362 KLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQA---SSMAL------QHR 412
           KLFRPSVEQALDANLKRIEESTAA+AAADDWVLTYPP GTRQ+   SSM+L       H+
Sbjct: 363 KLFRPSVEQALDANLKRIEESTAALAAADDWVLTYPPTGTRQSGRPSSMSLGNTTAFHHK 422

Query: 413 LTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANF 472
           L++SAHRFNLMVQDFFEDVGPLLSMQLGG+ LEGLFQVFNSYV++LIKALPGSMEEEANF
Sbjct: 423 LSSSAHRFNLMVQDFFEDVGPLLSMQLGGQTLEGLFQVFNSYVNLLIKALPGSMEEEANF 482

Query: 473 EGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLNQANYKDDPRRRHSDRQN 532
           EGSGNKIVRMAE E QQIALLANAS LADELLPRAAMK+SPLNQAN+KDDPRRR SDRQN
Sbjct: 483 EGSGNKIVRMAETEEQQIALLANASSLADELLPRAAMKLSPLNQANFKDDPRRRPSDRQN 542

Query: 533 RNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDELEWFP 592
           R+PEQREWKRRLV +VDRLKD+FC+QHALDLIFTE+GDS+L+ADMY+NMDGN DELEWFP
Sbjct: 543 RHPEQREWKRRLVSAVDRLKDSFCQQHALDLIFTEEGDSNLSADMYINMDGNADELEWFP 602

Query: 593 SLIFQK 598
           S IFQ+
Sbjct: 603 SPIFQE 608

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255568053\|ref\|XP_002525003.1\| conserved hypothetical protein [Ricinus communis] gi\|223535711\|gb\|EEF37375.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|224110014\|ref\|XP_002315387.1\| predicted protein [Populus trichocarpa] gi\|222864427\|gb\|EEF01558.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356522153\|ref\|XP_003529713.1\| PREDICTED: uncharacterized protein LOC100820599 [Glycine max]	Back alignment and taxonomy information

>gi\|356526324\|ref\|XP_003531768.1\| PREDICTED: uncharacterized protein LOC100816882 [Glycine max]	Back alignment and taxonomy information

>gi\|224097468\|ref\|XP_002310947.1\| predicted protein [Populus trichocarpa] gi\|222850767\|gb\|EEE88314.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449447970\|ref\|XP_004141739.1\| PREDICTED: uncharacterized protein LOC101213590 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449515827\|ref\|XP_004164949.1\| PREDICTED: uncharacterized LOC101213590 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297795751\|ref\|XP_002865760.1\| hypothetical protein ARALYDRAFT_495042 [Arabidopsis lyrata subsp. lyrata] gi\|297311595\|gb\|EFH42019.1\| hypothetical protein ARALYDRAFT_495042 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15240560\|ref\|NP_199794.1\| exocyst complex component 84B [Arabidopsis thaliana] gi\|8978259\|dbj\|BAA98150.1\| unnamed protein product [Arabidopsis thaliana] gi\|18700079\|gb\|AAL77652.1\| AT5g49830/K21G20_4 [Arabidopsis thaliana] gi\|20334792\|gb\|AAM16257.1\| AT5g49830/K21G20_4 [Arabidopsis thaliana] gi\|332008477\|gb\|AED95860.1\| exocyst complex component 84B [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		612
TAIR\|locus:2155441		814	EXO84B "exocyst complex compon	0.888	0.668	0.74	5.1e-223
TAIR\|locus:505006115		754	AT1G10385 "AT1G10385" [Arabido	0.949	0.770	0.577	1e-171
TAIR\|locus:2012768		769	AT1G10180 "AT1G10180" [Arabido	0.885	0.704	0.331	4.8e-71
ZFIN\|ZDB-GENE-070410-60		684	exoc8 "exocyst complex compone	0.401	0.359	0.251	9.7e-19
MGI\|MGI:2142527		716	Exoc8 "exocyst complex compone	0.426	0.364	0.261	1.2e-16
UNIPROTKB\|Q5ZJ43		708	EXOC8 "Exocyst complex compone	0.397	0.343	0.250	4.6e-16
UNIPROTKB\|F1NE80		709	EXOC8 "Exocyst complex compone	0.397	0.342	0.250	4.6e-16
RGD\|620245		716	Exoc8 "exocyst complex compone	0.426	0.364	0.258	5.6e-16
UNIPROTKB\|A4IF89		725	EXOC8 "Exocyst complex compone	0.424	0.358	0.253	2.1e-15
UNIPROTKB\|Q8IYI6		725	EXOC8 "Exocyst complex compone	0.398	0.336	0.250	2.7e-15

TAIR\|locus:2155441 EXO84B "exocyst complex component 84B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2025 (717.9 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
 Identities = 407/550 (74%), Positives = 470/550 (85%)

Query:    51 EIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQATLIH 110
             +I+QLCSYLLDLKRASAEEMR+SVYANY AFIRTSKEISDLEGELSSIRNLLSTQATLIH
Sbjct:   110 DIKQLCSYLLDLKRASAEEMRRSVYANYPAFIRTSKEISDLEGELSSIRNLLSTQATLIH 169

Query:   111 GLAEGVHIDSLKGS-ESFASKNDLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALT 169
             GLA+GV+ID  K S ES A  N LLN E+   SDLEKW+ EFPD LD LLAERR+DEAL 
Sbjct:   170 GLADGVNIDDDKVSDESLA--NGLLNFEDNGLSDLEKWATEFPDHLDALLAERRVDEALA 227

Query:   170 ALDEGEHLAAEAKQTKTLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAIS 229
             A DEGE L ++A +  TL  ++L SL+  I +R+QKLADQLA+AACQPSTRG ELR+AI+
Sbjct:   228 AFDEGEILVSQANEKHTLSSSVLSSLQFAIAERKQKLADQLAKAACQPSTRGGELRSAIA 287

Query:   230 ALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDS 289
             ALK+LGDGPRAH++LL+AH+QRYQY+MQSLRPSSTSYGGAYTAALSQLVFSAI+QA+ DS
Sbjct:   288 ALKRLGDGPRAHTVLLDAHFQRYQYNMQSLRPSSTSYGGAYTAALSQLVFSAISQASSDS 347

Query:   290 LAIFGKETAYTSELVMWATRQTEAFAHLVKRHXXXXXXXXXXXXXXXECVQIALGHCSLL 349
             L IFGKE AY+SELV WAT+QTEAF+ LVKRH               EC QIALGHCSLL
Sbjct:   348 LGIFGKEPAYSSELVTWATKQTEAFSLLVKRHALASSAAAGGLRAAAECAQIALGHCSLL 407

Query:   350 EARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQASSMAL 409
             EARGL+LCPVL+K F+P VEQAL+ANLKRIEE+TAAMAAADDWVLT PP G+R AS+ A 
Sbjct:   408 EARGLSLCPVLLKHFKPIVEQALEANLKRIEENTAAMAAADDWVLTSPPAGSRHAST-AF 466

Query:   410 QHRLTTSAHRFNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEE 469
             Q++LT+SAHRFNLMVQDFFEDVGPLLSMQLG K LEGLF+VFNSYV +L++ALPGS+EEE
Sbjct:   467 QNKLTSSAHRFNLMVQDFFEDVGPLLSMQLGSKALEGLFRVFNSYVDVLVRALPGSIEEE 526

Query:   470 -ANFEGSGNKIVRMAENEAQQIALLANASLLADELLPRAAMKVSPLNQANYKDDPRRRHS 528
               NFE S NKIV+MAE EA Q+ALLANASLLADELLPRAAMK+S L+Q   + D  RR  
Sbjct:   527 DPNFESSCNKIVQMAETEANQLALLANASLLADELLPRAAMKLS-LDQTGQRTDDLRRPL 585

Query:   529 DRQNRNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYLNMDGNVDEL 588
             DRQNRNPEQREWKRRL+ +VD+LKD FCRQHALDLIFTE+GDSHL+ADMY+N+D N +++
Sbjct:   586 DRQNRNPEQREWKRRLLSTVDKLKDAFCRQHALDLIFTEEGDSHLSADMYVNIDENGEDV 645

Query:   589 EWFPSLIFQK 598
             ++FPSLIFQ+
Sbjct:   646 DFFPSLIFQE 655

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR\|locus:505006115 AT1G10385 "AT1G10385" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2012768 AT1G10180 "AT1G10180" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-070410-60 exoc8 "exocyst complex component 8" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

MGI\|MGI:2142527 Exoc8 "exocyst complex component 8" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZJ43 EXOC8 "Exocyst complex component 8" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NE80 EXOC8 "Exocyst complex component 8" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

RGD\|620245 Exoc8 "exocyst complex component 8" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|A4IF89 EXOC8 "Exocyst complex component 8" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8IYI6 EXOC8 "Exocyst complex component 8" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		612
pfam08700		87	pfam08700, Vps51, Vps51/Vps67	1e-15

>gnl\|CDD\|219977 pfam08700, Vps51, Vps51/Vps67	Back alignment and domain information

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 30  FKSDKFDADVYVKSKCS-LNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEI 88
             S  FDAD Y     S    +E+RQ+   L        EE+R+ VY NY   I+ +  I
Sbjct: 1   LSSPSFDADRYFSELLSKATLEELRQIEKKLRAEIEELQEELRQLVYENYRDLIKAADTI 60

Query: 89  SDLEGELSSIRNLLSTQATLIHGLAEG 115
           S ++ E+ S+   LS     +  L+  
Sbjct: 61  SKMKSEMESLSQKLSELKQALEKLSSK 87

This family includes a presumed domain found in a number of components of vesicular transport. The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1. Cog1_N is the N-terminus of the Cog1 subunit of the eight-unit Conserved Oligomeric Golgi (COG) complex that participates in retrograde vesicular transport and is required to maintain normal Golgi structure and function. The subunits are located in two lobes and Cog1 serves to bind the two lobes together probably via the highly conserved N-terminal domain of approximately 85 residues. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		612
KOG2215		673	consensus Exocyst complex subunit [Intracellular t	100.0
KOG2346		636	consensus Uncharacterized conserved protein [Funct	99.97
PF04124		338	Dor1: Dor1-like family ; InterPro: IPR007255 Dor1	99.84
PF08700		87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	99.7
KOG2069		581	consensus Golgi transport complex subunit [Intrace	99.65
KOG2215		673	consensus Exocyst complex subunit [Intracellular t	99.64
PF15469		182	Sec5: Exocyst complex component Sec5	99.2
PF06248		593	Zw10: Centromere/kinetochore Zw10; InterPro: IPR00	98.86
PF04100		383	Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007	98.62
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	98.56
PF10475		291	DUF2450: Protein of unknown function N-terminal do	98.56
KOG2033		863	consensus Low density lipoprotein B-like protein [	98.18
KOG2347		934	consensus Sec5 subunit of exocyst complex [Intrace	98.03
KOG2180		793	consensus Late Golgi protein sorting complex, subu	97.84
PF06148		133	COG2: COG (conserved oligomeric Golgi) complex com	97.47
PF10392		132	COG5: Golgi transport complex subunit 5; InterPro:	97.19
KOG2307		705	consensus Low density lipoprotein receptor [Intrac	96.29
KOG4182		828	consensus Uncharacterized conserved protein [Funct	94.87
PF04048		142	Sec8_exocyst: Sec8 exocyst complex component speci	92.8
KOG3691		982	consensus Exocyst complex subunit Sec8 [Intracellu	92.5
PF03081		371	Exo70: Exo70 exocyst complex subunit; InterPro: IP	86.37
PF07393		710	Sec10: Exocyst complex component Sec10; InterPro:	85.35

>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=2.9e-46  Score=414.10  Aligned_cols=571  Identities=31%  Similarity=0.387  Sum_probs=482.1

Q ss_pred             hhhcccCCCCCChHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHhHHHHHHHHHHHHHH
Q 007221           25 EGLNLFKSDKFDADVYVKSKCSLNEKEIRQLCSYLLDLKRASAEEMRKSVYANYAAFIRTSKEISDLEGELSSIRNLLST  104 (612)
Q Consensus        25 ~~~~~f~~~~Fd~e~Yv~~~l~~~e~~L~~~~~~L~~lk~~~~sdLq~~VY~NY~~FI~aSkEIs~LE~EM~~L~~lLs~  104 (612)
                      ++...|..+.|+|+.|+++.....+++++++|+++..+++++++.|+++||.||.+||++||||++||.||++++|++.+
T Consensus         4 ~~~s~f~~~~~t~~~~i~~~~~~~e~dl~~~~~~~~~l~~as~e~~r~~~~~ny~~fI~~skEi~~le~el~~l~~~l~~   83 (673)
T KOG2215|consen    4 DDDSSFEDEKITPSSYIPSKSKKKESDLQQLCSELVALNKASAETLRQKVSMNYKAFIRTSKEISDLEMELYQLPKFLIE   83 (673)
T ss_pred             CccccCcccccCccccccchhhhhhhhHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHhcCcccccccchHHHhHHhhhh
Confidence            45557999999999999999866679999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhhcccccccCCCCcccccccccCCCCC-chhhHhhhhhhHHHHHHHccCHHHHHHHHHHHHHHHHhhcc
Q 007221          105 QATLIHGLAEGVHIDSLKGSESFASKNDLLNLENKEPS-DLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQ  183 (612)
Q Consensus       105 q~~~I~~Ls~~v~~~sl~~~~d~~~~~~~~~~~~~~~~-~~l~wl~elpdeLDv~IAer~feeAV~ll~k~~~~L~~~~~  183 (612)
                      |.+.++++..|++.+-....+..+..+.....++.+.. ...+|+.++++.++.+.+.+ .+.|...++..+. +...+.
T Consensus        84 Q~~~~~~l~~~~~~d~~~~~s~~s~sn~~~~~~~~~l~~~~~~~~~~fl~~l~~~~~~~-~dg~l~~~D~~~~-~~~q~~  161 (673)
T KOG2215|consen   84 QNNVIQSLLNGVLQDLSEDESLESLSNTLLSLEDIHLGDVVKNLVKGFLKNLNTLLFES-VDGALEAFDFEKF-LPSQKT  161 (673)
T ss_pred             ccchHHHhhccccccccccccccccCCccccccCCchhHHHHHHHHHHHHhhhhhhhcc-chHHHhhcchhhh-ccchHH
Confidence            99999999999872211111111100110112222222 55799999999999999999 8888887765432 111111


Q ss_pred             cC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccccccc
Q 007221          184 TK-TLDPAMLISLENTIIDRRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPS  262 (612)
Q Consensus       184 ~~-~~~~~~~~~i~~kl~~r~~~L~~~L~~~l~~~s~~~~elr~aV~lL~rLG~~~~A~~lfL~~rs~~L~~~l~~l~~~  262 (612)
                      .. ..++ .....+..++.|...|++.+.....++++...++..++-.|++||.++.++.+.++.+..++...+...++.
T Consensus       162 ~~~~~~~-~L~~~~~~~~~r~~~l~d~~~~~a~~~~~~~~e~~~a~~~li~l~~~~~~~~i~~~~~~~~~~~~~ea~R~~  240 (673)
T KOG2215|consen  162 LKTDFSH-DLNSVKITHDKRKESLTDLSLRLAAQINIKDEESWEAQLNLIRLGYSRMYHNILAQRPTLWVNMLIQAKRLS  240 (673)
T ss_pred             HHHHHHh-hhhhhhhhhchhhhHHHHHHHHHhhccccchHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHH
Confidence            10 1111 256678889999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccccchHHhhHHHHHHHHHHHHHHHHHhcCCC--CcchhhHHHHHHHHHHHHHHHHhHHhcCcccccCchHHHHHHHH
Q 007221          263 STSYGGAYTAALSQLVFSAIAQAACDSLAIFGKE--TAYTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQ  340 (612)
Q Consensus       263 gs~~~~~YI~~Ls~~fFs~I~~t~~~f~~~F~d~--~~~~S~LV~Wa~~eie~f~~l~krqv~~~~~a~~~l~~~~ecv~  340 (612)
                      ...++..|-+.++.+.|+.+..+..+-...|++.  +++....+.|...+++.|-.+|+.+.+.++..+..++..+.|.+
T Consensus       241 l~~~~~~~qa~~~~~~~~~~S~A~~e~~~~~~~e~~~s~~~~~~~W~~~~~e~~~~~v~~~~~~~s~~~~~l~~~~~~~~  320 (673)
T KOG2215|consen  241 LQTSPMERQATFPKLRFSAISWALTESLISFGEENLPSYSDEEVLWLEELVELFKLLVAHNAFKTSLEAIHLRAASACLQ  320 (673)
T ss_pred             HhhCccccccccchHHHhcCCcccCcccccccCCCCcccchhhhchhhhhhHHHHHHHHhccchhhHHHHHhhhcccchh
Confidence            8877789999999999999999999999999988  88999999999999999999999999888777788898899999


Q ss_pred             HHHHhhhhhhhcCCCchHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCccc-cccccccccchhHHH
Q 007221          341 IALGHCSLLEARGLALCPVLIKLFRPSVEQALDANLKRIEESTAAMAAADDWVLTYPPMGTRQA-SSMALQHRLTTSAHR  419 (612)
Q Consensus       341 ~~~~~c~~L~~vGLdl~~lL~~lL~p~ve~al~~~~~~i~e~i~~~~~~d~W~~~~~~~~~~~~-~~~~~~~~LT~S~~~  419 (612)
                      .+..+|..|+.+||-+..+|..++.  ++++++.++.+.......++.-++|....++-..+.+ ...+..+..|+++++
T Consensus       321 ~~~~~~~~Lq~~~lfl~~~ll~~~~--~~~~le~~~r~~~~~~~~l~el~~~~~at~~~l~~~s~~~~a~~~~~~~~~~r  398 (673)
T KOG2215|consen  321 LALTICKPLQMRELFLLNLLLKIFS--VERALERDFRVAQRRHHQLVELGRWSRSTKRLLFKHSESLSAYRCRDTDEASR  398 (673)
T ss_pred             hhhhhhhhhhHhHhhhhhHHHHHhh--hhhhhhhhHHHHhhhHHHHHHhhhhcccchHHHHHHHHHHHHHHhhhhhhhHH
Confidence            9999999999999999999999999  8999999999999999999999999976554444433 233467899999999


Q ss_pred             HHHHHHHHHHhhcccccccchHHHHHHHHHHHHHHHHHHHhhCCCChhhhhcccCCCcccccccccHHHHHHHHhhHHHH
Q 007221          420 FNLMVQDFFEDVGPLLSMQLGGKMLEGLFQVFNSYVSMLIKALPGSMEEEANFEGSGNKIVRMAENEAQQIALLANASLL  499 (612)
Q Consensus       420 F~~~v~~f~ed~~~L~~~~L~~~~~~~l~~lf~~y~~~l~~al~~~~~~~~~~~~~~~~~~~~a~t~~qq~~ll~Na~~l  499 (612)
                      |.-++++|.++++++.+.+.++..+..+.+.++.|++.+.+++|++.++.+-.+..+..+++.+++..+|++.|+++.++
T Consensus       399 ~~~~~~d~~~~l~~~~~~e~~s~~~~~~~q~~~~~ldtl~~~l~~s~~e~~~~~s~~a~iv~~a~~~~~qL~~ig~~lt~  478 (673)
T KOG2215|consen  399 FLQVVQDFSEDLCDILKFEQGSKCLYTSFQVLNKELDTLGRQLPRSYEEQGPARSMVAEIVKRAEHTSEQLTLIGLDLTI  478 (673)
T ss_pred             HHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHcccchhhcCchHHHHHHHHHHhhhhHHHHHHHHhhHHH
Confidence            99999999999999999999999999999999999999999999988887766777889999999999999999999999


Q ss_pred             HHhhHHHHhhhhcCCccCCCCCCcCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCCCccccHHHhh
Q 007221          500 ADELLPRAAMKVSPLNQANYKDDPRRRHSDRQNRNPEQREWKRRLVISVDRLKDTFCRQHALDLIFTEDGDSHLNADMYL  579 (612)
Q Consensus       500 ~d~llp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~c~~~~~~~~~~~~~~~~l~~~~~~  579 (612)
                      .++.||+....-.  +......+...++++++++  |.++|++++-.+.++|++-||+++++.++|.+.|.+++++++|+
T Consensus       479 ~~~~Llr~~le~s--~~l~~~~E~~~~ald~r~~--~ee~W~~~~L~t~s~Lk~l~ee~~~~gv~~~~~~~~~~e~d~~~  554 (673)
T KOG2215|consen  479 RDEALLRSKLESS--QLLEGFKEGIADALDNRNR--EEESWVRYLLQTESALKDLSEELSDLGVIYLRQISHELEGDGWL  554 (673)
T ss_pred             HHHhhhhhhHHHh--hhhhcchhhHHHHHHhhhh--HHHHHHHHHHhhHHHHHHHHHHhhhhhhhhHhhhhcccccceEE
Confidence            9999999887663  2222223434577888887  89999999999999999999999999999999999999999996


Q ss_pred             hcc-------------CCCCCCccccchhHHHHHHHHH
Q 007221          580 NMD-------------GNVDELEWFPSLIFQKTKVFGM  604 (612)
Q Consensus       580 ~~~-------------~~~~~~~~~ps~~fq~~~~~~~  604 (612)
                      ++-             -..+.+...|.++||.+-++--
T Consensus       555 nl~~q~v~~~~~~~~~le~d~~l~k~~l~~~lLe~L~e  592 (673)
T KOG2215|consen  555 NLSSQLVVSKKQLMHLLEKDLPLGKLELAFQLLELLAE  592 (673)
T ss_pred             ehhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHH
Confidence            622             1223344467777776665543

>KOG2346 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 []	Back alignment and domain information

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi	Back alignment and domain information

>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF15469 Sec5: Exocyst complex component Sec5	Back alignment and domain information

>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells	Back alignment and domain information

>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]	Back alignment and domain information

>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex	Back alignment and domain information

>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking	Back alignment and domain information

>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4182 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex	Back alignment and domain information

>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins []	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		612
2d2s_A		235	Exocyst complex component EXO84; tethering complex	2e-58
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12

>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2 Length = 235	Back alignment and structure

 Score =  194 bits (495), Expect = 2e-58
 Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 12/241 (4%)

Query: 132 DLLNLENKEPSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAM 191
            +    +     L K+  E  + +D+ LA  R + A+  L + E    +  +  + +  M
Sbjct: 3   HMSRDMSSTAQRL-KFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELM 61

Query: 192 LISLENTIID-RRQKLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQ 250
           L++L +  I+ RR+ ++ +L+++    S     L++    + KLG   +A  L L     
Sbjct: 62  LLNLISLKIEQRREAISSKLSQSIL-SSNEIVHLKSGTENMIKLGLPEQALDLFLQNRSN 120

Query: 251 RYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKETA-YTSELVMWATR 309
             Q  +  +          Y   L+ + F  I +   D   IF +  A  +S LV W + 
Sbjct: 121 FIQDLILQIGSVDNPT--NYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSD 178

Query: 310 QTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVE 369
           + +    L+ +  L           +   ++ +      L+A GL     L +  + + +
Sbjct: 179 EVDNHFKLIDKQLL------NDEMLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSD 232

Query: 370 Q 370
           +
Sbjct: 233 K 233

PyMOL of 2d2s

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		612
2d2s_A		235	Exocyst complex component EXO84; tethering complex	100.0

>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2	Back alignment and structure

Probab=100.00  E-value=5.9e-46  Score=373.40  Aligned_cols=221  Identities=19%  Similarity=0.236  Sum_probs=199.2

Q ss_pred             CCchhhHhhhhhhHHHHHHHccCHHHHHHHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 007221          141 PSDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTK-TLDPAMLISLENTIIDRRQKLADQLAEAACQPST  219 (612)
Q Consensus       141 ~~~~l~wl~elpdeLDv~IAer~feeAV~ll~k~~~~L~~~~~~~-~~~~~~~~~i~~kl~~r~~~L~~~L~~~l~~~s~  219 (612)
                      ..+.++|+.++||+|||+||+|+||+||++++++++.+..++... +.+++....|+.|+++|++.|+++|.+++.+ +.
T Consensus        11 ~~~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~-~~   89 (235)
T 2d2s_A           11 TAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SN   89 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CS
T ss_pred             cchhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence            456799999999999999999999999999999999999876532 2345678999999999999999999999966 77


Q ss_pred             ChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccccccccccccchHHhhHHHHHHHHHHHHHHHHHhcCC-CCc
Q 007221          220 RGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGK-ETA  298 (612)
Q Consensus       220 ~~~elr~aV~lL~rLG~~~~A~~lfL~~rs~~L~~~l~~l~~~gs~~~~~YI~~Ls~~fFs~I~~t~~~f~~~F~d-~~~  298 (612)
                      ++.+++++|++|+|||++++||++||++|+.+|+++++++..+|+  ++.||.+||.+||+.|++|+++|.++|++ +|.
T Consensus        90 ~~~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~~~gd--~~~Yi~~Ls~i~Fs~I~~t~~~f~~~F~~~~~~  167 (235)
T 2d2s_A           90 EIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDN--PTNYLTQLAVIRFQTIKKTVEDFQDIFKELGAK  167 (235)
T ss_dssp             SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCS--HHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred             CHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhcccCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            899999999999999999999999999999999999999976664  59999999999999999999999999998 778


Q ss_pred             chhhHHHHHHHHHHHHHHHHhHHhcCcccccCchHHHHHHHHHHHHhhhhhhhcCCCchHHHHHhhhHHHHH
Q 007221          299 YTSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQ  370 (612)
Q Consensus       299 ~~S~LV~Wa~~eie~f~~l~krqv~~~~~a~~~l~~~~ecv~~~~~~c~~L~~vGLdl~~lL~~lL~p~ve~  370 (612)
                      |+|+||.||++|++.|+.+|+||+++ .   +++.  ++||+++++||++|+++||||+|+|+++|+|++++
T Consensus       168 ~~S~lV~Wa~~eve~f~~l~~rqv~~-~---~~l~--~ecv~i~~~~~~~L~~vGLd~~~~L~~ll~~~~~~  233 (235)
T 2d2s_A          168 ISSILVDWCSDEVDNHFKLIDKQLLN-D---EMLS--PGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDK  233 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTC-------CC--HHHHHHHHHHHHGGGGGTCCCHHHHHHHHHTTGGG
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHccC-C---ccHH--HHHHHHHHHHHHHHHHcCCChHHHHHHHHhhhHhh
Confidence            99999999999999999999999988 2   3666  49999999999999999999999999999999875

PyMOL of 2d2s

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		612
d2d2sa1		229	a.118.17.2 (A:525-753) Exocyst complex component E	1e-57

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  191 bits (487), Expect = 1e-57
 Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 11/227 (4%)

Query: 146 KWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLDPAMLISLENTIID-RRQ 204
           K+  E  + +D+ LA  R + A+  L + E    +  +  + +  ML++L +  I+ RR+
Sbjct: 10  KFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRRE 69

Query: 205 KLADQLAEAACQPSTRGAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSST 264
            ++ +L++ +   S     L++    + KLG   +A  L L       Q  +  +     
Sbjct: 70  AISSKLSQ-SILSSNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDN 128

Query: 265 SYGGAYTAALSQLVFSAIAQAACDSLAIF-GKETAYTSELVMWATRQTEAFAHLVKRHAL 323
                Y   L+ + F  I +   D   IF       +S LV W + + +    L+ +  L
Sbjct: 129 PT--NYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFKLIDKQLL 186

Query: 324 ASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQ 370
                      +   ++ +      L+A GL     L +  + + ++
Sbjct: 187 ------NDEMLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDK 227

PyMOL of d2d2sa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		612
d2d2sa1		229	Exocyst complex component EXO84 {Baker's yeast (Sa	100.0

>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-42  Score=341.68  Aligned_cols=220  Identities=19%  Similarity=0.231  Sum_probs=194.8

Q ss_pred             CchhhHhhhhhhHHHHHHHccCHHHHHHHHHHHHHHHHhhcccCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 007221          142 SDLEKWSVEFPDLLDVLLAERRIDEALTALDEGEHLAAEAKQTKTLD-PAMLISLENTIIDRRQKLADQLAEAACQPSTR  220 (612)
Q Consensus       142 ~~~l~wl~elpdeLDv~IAer~feeAV~ll~k~~~~L~~~~~~~~~~-~~~~~~i~~kl~~r~~~L~~~L~~~l~~~s~~  220 (612)
                      .+.++|+.|+||+||||||+|+||+||++++++++++..+++.+... ......+..++++|++.|+++|.+.++. +.+
T Consensus         6 ~~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~-~~~   84 (229)
T d2d2sa1           6 AQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SNE   84 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSS
T ss_pred             HhhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCC
Confidence            35699999999999999999999999999999999999887654222 2346779999999999999999998865 567


Q ss_pred             hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccccccccccccchHHhhHHHHHHHHHHHHHHHHHhcCCC-Ccc
Q 007221          221 GAELRAAISALKKLGDGPRAHSLLLNAHYQRYQYSMQSLRPSSTSYGGAYTAALSQLVFSAIAQAACDSLAIFGKE-TAY  299 (612)
Q Consensus       221 ~~elr~aV~lL~rLG~~~~A~~lfL~~rs~~L~~~l~~l~~~gs~~~~~YI~~Ls~~fFs~I~~t~~~f~~~F~d~-~~~  299 (612)
                      .++++++|.+|+|||.+++||++||++|+.+|++.+++++++|+.  ..||.+++.+||+.|++|+.+|+++|+++ |.|
T Consensus        85 ~~~~~~~v~~L~rLg~~~~A~~lfL~~rs~~l~~~i~~~~~~~~~--~~Yi~~l~~i~f~~i~~t~~~y~aiF~~~~~~~  162 (229)
T d2d2sa1          85 IVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDNP--TNYLTQLAVIRFQTIKKTVEDFQDIFKELGAKI  162 (229)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCSH--HHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred             hHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHhcCcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence            899999999999999999999999999999999999999999976  69999999999999999999999999764 557


Q ss_pred             hhhHHHHHHHHHHHHHHHHhHHhcCcccccCchHHHHHHHHHHHHhhhhhhhcCCCchHHHHHhhhHHHHH
Q 007221          300 TSELVMWATRQTEAFAHLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLIKLFRPSVEQ  370 (612)
Q Consensus       300 ~S~LV~Wa~~eie~f~~l~krqv~~~~~a~~~l~~~~ecv~~~~~~c~~L~~vGLdl~~lL~~lL~p~ve~  370 (612)
                      +|.||.||.+|++.|+.+|+||++++      .+++++||+++++||+.|+++||||+|+|+++|++++++
T Consensus       163 sS~lv~Wa~~ei~~f~~~l~r~l~~~------~~~~~~~i~~~~~~c~~L~~vGlDf~~lL~~ll~~~~~~  227 (229)
T d2d2sa1         163 SSILVDWCSDEVDNHFKLIDKQLLND------EMLSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDK  227 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTC---------CCHHHHHHHHHHHHGGGGGTCCCHHHHHHHHHTTGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcccc------hhHHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHhhHHh
Confidence            89999999999999999999999754      346689999999999999999999999999999999875

PyMOL of d2d2sa1