Citrus Sinensis ID: 007226


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--
MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
cccccEEcccccccccccccHHHHHHHHHHHHccccEEEEEEccccccccccccccccEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHccccccccccEEEEEcccEEEEEcccccEEcccccccccccccccHHHHHHHHccHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccEEEEEEEHHHHHHHcccccccccccEEEccccccccccccccEEEcccccHHHHHHHHHHHHHcccccccccccccccccEEEEEcccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccHHHHcccccccEEccccEEEEEEcEEEEEEEEEEEEEEEEEEEcccccEEcccccEEEEccccccEEEEEcEEEEEccEEcccccccccccccEEEEEEEEEEEcccEEEEEcEEEEccEEEEEcccEEEEEEEccccEEEEccccccccccccccEEEEEEcccEEEEEEEEc
cccEEEEEEcccccccccccHHHHHHHHHcHHccHHcEEEEEcccccHHcccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccHHHHHHHHHHccccccccccEEEEEcccEEEEEcccccEEEccccEEEEcccccHHHHHHHHHccHHHHHHHcccEEEEEEEccccEEEccccHHHHHHHcccccccccEEEEEccccccHcEEEEEEEEcccccEEEEEEEEEEEcccHcccccccccccccccccccccEEEEEEcHHHHHHcccccccccccEEEEcccccEEEccccccccccccHHHHHHHcHHHHccccccccccccccccccEEEEEccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccHHHHHHHHHHccccEEccccEEEEEEEEEEEEEEEEccEEEEEEccccccccccccccEEEEEcccccEEEEEEEEEEEccEEccccccEEEEEcEEEEEEEEEEEEcccEEEEEEEEEEccEEEEEccccEEEEEEccccEEEEEccccHHHcccccEEEEEEEcccEEEEEEEEc
mecqfleihvpsgldlsqnTEYAAQAALWGieglpelgeiyplggsadrlglvdhetgeclpaamlpyCGRTLLEGLIRDLQAREFLYFKLygkqcitpvAIMTSSAKNNHERITSLCERLRwfgrgqssfqlfeqplvpavdaedgqwlvmrpfapvckpgghgaIWKLAHDKGIFKwfhdngrkgatvRQVSNVVAATDLTLLALAGIglhhgkklgfasckrssgateGINVLIEKknldgkwayglscieytefdkfgitrgpfssnglqadfpantniLYVDLASaelvgssenerslpgmvlntkkpivymdnfgdthsvpggrleCTMQNIADNFLNTYSSrcykgveddldtfmVYNERRRVTSSAKKKRkradmslhqtpdgsfLDILRNAYDILCQChiklpeiegndkyiddgppyliLLHPALGLLWEVTRqkfkggsvskgseLQIEVAEFLWRNVQLDGSLIIVAENvmgstriadngESILQYGyrcgrcklnnvkvlnkgidwdcgdntywkHDVQWFEALKVILHGnaefeasdvtlqgnhvfevpdghklkitsgnsglvvqldpieqnmmdtgswhwnykingSHIVLELVEL
MECQFLEIHvpsgldlsqNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLiekknldgkwAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVgssenerslpgmvlNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVeddldtfmvynerrrvtssakkkrkradmslhqtpdgsfLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVaatdltllalaGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
****FLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELV**********GMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYN**************************SFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELV**
****FLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDK**********NGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRV******************PDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKF***SVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERR****************LHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
*ECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVT*****************PDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
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MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLELVEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query612 2.2.26 [Sep-21-2011]
Q5W915600 UDP-sugar pyrophospharyla N/A no 0.748 0.763 0.245 1e-09
Q0GZS3614 UDP-sugar pyrophospharyla N/A no 0.661 0.659 0.250 1e-09
Q09WE7600 UDP-sugar pyrophosphoryla no no 0.602 0.615 0.250 2e-08
Q9C5I1614 UDP-sugar pyrophosphoryla no no 0.714 0.711 0.234 5e-08
A2YGP6616 UDP-sugar pyrophosphoryla N/A no 0.725 0.720 0.221 2e-05
Q5Z8Y4616 UDP-sugar pyrophosphoryla no no 0.725 0.720 0.219 3e-05
Q6GEQ8395 Probable uridylyltransfer yes no 0.235 0.364 0.253 0.0002
Q7A0A0395 Probable uridylyltransfer yes no 0.235 0.364 0.240 0.0006
Q6G7E3395 Probable uridylyltransfer yes no 0.235 0.364 0.240 0.0006
Q7A4A4395 Probable uridylyltransfer yes no 0.235 0.364 0.240 0.0006
>sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1 Back     alignment and function desciption
 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 202/509 (39%), Gaps = 51/509 (10%)

Query: 10  VPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYC 69
           VP+G  L    E   +    G+        +   GG  +RLG   +     LPA      
Sbjct: 91  VPTGETLKFGDENFNKYEEAGVREARRAAFVLVAGGLGERLGY--NGIKVALPAETT--T 146

Query: 70  GRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQS 129
           G   L+  I  + A +    +  G+  I P  IMTS   + H R   L E   +FG   +
Sbjct: 147 GTCFLQHYIESILALQEASSEGEGQTHI-PFVIMTSD--DTHGRTLDLLESNSYFGMQPT 203

Query: 130 SFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186
              L +Q  V  ++  D + L + P   +    KP GHG +  L H  GI K +++ G K
Sbjct: 204 QVTLLKQEKVACLEDNDAR-LALDPQNRYRVQTKPHGHGDVHSLLHSSGILKVWYNAGLK 262

Query: 187 GATVRQVSNVVAATDLTLLAL-AGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGK 245
                Q +N      L   A+ + +G+   K+    S      A E I  +    + DG+
Sbjct: 263 WVLFFQDTN-----GLLFKAIPSALGVSSTKQYHVNSLAVPRKAKEAIGGITRLTHSDGR 317

Query: 246 WAYGLSCIEYTEFDKF----GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENER 301
               +  +EY + D      G   G  +S    + FP N N L ++L      G    E 
Sbjct: 318 SM--VINVEYNQLDPLLRASGYPDGDVNSETGYSPFPGNINQLILEL------GPYIEEL 369

Query: 302 SLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTF 361
           +  G  +       Y D    T      RLEC MQ+         SSR    V   ++T+
Sbjct: 370 AKTGGAIQEFVNPKYKDA-SKTSFKSSTRLECMMQDYPKTL--PPSSRVGFTV---METW 423

Query: 362 MVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKL--PEIEG-ND 418
             Y     V ++A+   K    + + +     + I R    IL +   ++  P ++  N 
Sbjct: 424 FAYAP---VKNNAEDAAKVPKGNPYHSATSGEMAIYRANSLILKKAGFQVADPVLQVING 480

Query: 419 KYIDDGPPYLILLHPALGLLWEVTRQKFKGG-SVSKGSELQIEVAEFLWRNVQLDGSLII 477
           + ++  P   I   P  GL + + + K  G  S+S+ S L I+  +    N+ +DG+LI+
Sbjct: 481 QEVEVWP--RITWKPKWGLTFSLVKSKVSGNCSISQRSTLAIKGRKIFIENLSVDGALIV 538

Query: 478 VA-----ENVMGSTRIADNGESILQYGYR 501
            A      NV GS  + +NG ++    Y+
Sbjct: 539 DAVDDAEVNVSGS--VQNNGWALEPVDYK 565




May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars.
Pisum sativum (taxid: 3888)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 4
>sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1 Back     alignment and function description
>sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1 Back     alignment and function description
>sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2 Back     alignment and function description
>sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1 Back     alignment and function description
>sp|Q6GEQ8|URTF_STAAR Probable uridylyltransferase SAR2262 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2262 PE=3 SV=1 Back     alignment and function description
>sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3 SV=1 Back     alignment and function description
>sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072 PE=3 SV=1 Back     alignment and function description
>sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus (strain N315) GN=SA1974 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
224109282 877 predicted protein [Populus trichocarpa] 0.998 0.696 0.844 0.0
225448507 860 PREDICTED: uncharacterized protein LOC10 0.998 0.710 0.825 0.0
255574832 884 conserved hypothetical protein [Ricinus 1.0 0.692 0.805 0.0
147794750 866 hypothetical protein VITISV_024684 [Viti 0.998 0.705 0.816 0.0
356568154 857 PREDICTED: uncharacterized protein LOC10 0.996 0.711 0.795 0.0
356539993 766 PREDICTED: uncharacterized protein LOC10 0.996 0.796 0.796 0.0
357461351 868 hypothetical protein MTR_3g071440 [Medic 0.995 0.701 0.780 0.0
18410414 883 UDP-glucose pyrophosphorylase 3 [Arabido 0.996 0.690 0.749 0.0
297820348 883 hypothetical protein ARALYDRAFT_486043 [ 0.996 0.690 0.744 0.0
7573499 871 putative protein [Arabidopsis thaliana] 0.977 0.686 0.734 0.0
>gi|224109282|ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1096 bits (2834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/611 (84%), Positives = 564/611 (92%)

Query: 1   MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGEC 60
           MECQFLEIH PSGLDLS+NTEYA+QAALWGIEGLP+LGEIYPLGGSADRLGLVD +TGEC
Sbjct: 266 MECQFLEIHAPSGLDLSKNTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPDTGEC 325

Query: 61  LPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCER 120
           LPAAMLPYCGRTLLEGLIRDLQAREFLYFK+YGKQCITPVAIMTSSAKNNHE ITSLCER
Sbjct: 326 LPAAMLPYCGRTLLEGLIRDLQAREFLYFKIYGKQCITPVAIMTSSAKNNHEHITSLCER 385

Query: 121 LRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWF 180
           L WFGRGQSSFQLFEQPLVPA+ AEDGQWLV +PFAPVCKPGGHG IWKLA+DKGIF+WF
Sbjct: 386 LSWFGRGQSSFQLFEQPLVPAISAEDGQWLVTKPFAPVCKPGGHGVIWKLAYDKGIFEWF 445

Query: 181 HDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKK 240
           +D+ RKGATVRQVSNVVAATDLTLLALAGIGL H KKLGFASCKR+SGATEGINVLIEKK
Sbjct: 446 YDHDRKGATVRQVSNVVAATDLTLLALAGIGLRHRKKLGFASCKRNSGATEGINVLIEKK 505

Query: 241 NLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENE 300
           NLDG+WAYGLSCIEYTEFDKF IT GP S+NGLQA+FPANTNILYVDL S ELV SS NE
Sbjct: 506 NLDGQWAYGLSCIEYTEFDKFEITGGPCSTNGLQAEFPANTNILYVDLPSLELVASSNNE 565

Query: 301 RSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDT 360
           +SLPGMVLNTKKPIVYMD++G+ HSV GGRLECTMQNIADNF NTY SRCYKGVED LDT
Sbjct: 566 KSLPGMVLNTKKPIVYMDHYGNCHSVYGGRLECTMQNIADNFTNTYLSRCYKGVEDKLDT 625

Query: 361 FMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKY 420
           F+VYNERRRVTSSAK+KR+ +D +LHQTPDG+ LDILRNAYD+L  C I+LP+IEGNDKY
Sbjct: 626 FIVYNERRRVTSSAKRKRRHSDNTLHQTPDGALLDILRNAYDLLSHCDIELPQIEGNDKY 685

Query: 421 IDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAE 480
           ++ GPP+LI LHPALG LWEVTRQKF GGS+SKGSELQIEVAEF WRNVQLDGSLII+AE
Sbjct: 686 VESGPPFLIYLHPALGPLWEVTRQKFNGGSISKGSELQIEVAEFSWRNVQLDGSLIIIAE 745

Query: 481 NVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVI 540
           NVMGSTRI  NGE ILQYG RCGRC+L NVKV+NKGI+W  GDN YWKHDVQ FEALKVI
Sbjct: 746 NVMGSTRIDPNGEPILQYGNRCGRCRLQNVKVVNKGINWSFGDNIYWKHDVQRFEALKVI 805

Query: 541 LHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKI 600
           LHGNAEFEA +VT+QGN +FE+PDG+K+KITSG+SGL VQL+P+EQ +MD+GSWHWNYKI
Sbjct: 806 LHGNAEFEADNVTIQGNQIFEIPDGYKMKITSGDSGLQVQLNPLEQKIMDSGSWHWNYKI 865

Query: 601 NGSHIVLELVE 611
           +GSHI LELVE
Sbjct: 866 HGSHIQLELVE 876




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448507|ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera] gi|297736576|emb|CBI25447.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255574832|ref|XP_002528323.1| conserved hypothetical protein [Ricinus communis] gi|223532278|gb|EEF34081.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147794750|emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568154|ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788781 [Glycine max] Back     alignment and taxonomy information
>gi|356539993|ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804343 [Glycine max] Back     alignment and taxonomy information
>gi|357461351|ref|XP_003600957.1| hypothetical protein MTR_3g071440 [Medicago truncatula] gi|355490005|gb|AES71208.1| hypothetical protein MTR_3g071440 [Medicago truncatula] Back     alignment and taxonomy information
>gi|18410414|ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gi|332645948|gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297820348|ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] gi|297323895|gb|EFH54316.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|7573499|emb|CAB87858.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query612
TAIR|locus:2082038883 UGP3 "UDP-glucose pyrophosphor 0.995 0.689 0.734 2.4e-257
TAIR|locus:2149574614 USP "UDP-sugar pyrophosphoryla 0.751 0.749 0.233 1.1e-08
TAIR|locus:2082038 UGP3 "UDP-glucose pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2477 (877.0 bits), Expect = 2.4e-257, P = 2.4e-257
 Identities = 449/611 (73%), Positives = 524/611 (85%)

Query:     3 CQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLP 62
             CQ+LE+H PS LDL+Q  +YA+QAALWGIEGLP+LGEIYPLGG+ADRLGL+D ETGECLP
Sbjct:   271 CQYLEMHTPSVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAADRLGLIDSETGECLP 330

Query:    63 AAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLR 122
             AAML +CGRTLLEGLIRDLQAREFLYFKLYGKQC+TPVAIMTS+AKNNHE ++SLCERL+
Sbjct:   331 AAMLAHCGRTLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAKNNHEHVSSLCERLK 390

Query:   123 WFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHD 182
             WFGRGQS+F+LFEQPLVPAV AEDGQW+V +PF PV KPGGHG IWKLA+DKG+F WF+D
Sbjct:   391 WFGRGQSNFRLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIWKLAYDKGVFNWFYD 450

Query:   183 NGRKGATVRQVSNVVXXXXXXXXXXXGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNL 242
             +GRKGATVRQVSNVV           GIGL + KKLGFASCKR++GATEGINVL+EKKN 
Sbjct:   451 HGRKGATVRQVSNVVAATDVTLLALAGIGLRYNKKLGFASCKRNAGATEGINVLMEKKNF 510

Query:   243 DGKWAYGLSCIEYTEFDKFGIT-RGPFSSNGLQADFPANTNILYVDLASAELVGSSENER 301
             DGKW YG+SCIEYTEFDKF I+ R P SSNGLQADFPANTNILYVDL SAEL+GSS N +
Sbjct:   511 DGKWEYGISCIEYTEFDKFDISNRSP-SSNGLQADFPANTNILYVDLHSAELIGSSSNAK 569

Query:   302 SLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTF 361
             SLP MVLNTKK I Y+D +GD HSV GGRLECTMQNIADNF N + SRC+  +ED LDT+
Sbjct:   570 SLPNMVLNTKKRIEYLDQYGDYHSVMGGRLECTMQNIADNFFNKFPSRCHGSLEDKLDTY 629

Query:   362 MVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYI 421
             +VYNERR+VTSSAKKK+  A  +LHQTPDG+ LDILRN YD+L +C IKLP IE NDKY+
Sbjct:   630 IVYNERRKVTSSAKKKKPHASAALHQTPDGALLDILRNGYDLLTECDIKLPMIEANDKYV 689

Query:   422 DDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAEN 481
             D  PPYLILLHPALG LWEV+RQKFKGGS+S  SELQ+E+AEF W NVQ+DGSLI+ AEN
Sbjct:   690 DSPPPYLILLHPALGPLWEVSRQKFKGGSISSCSELQLEIAEFSWNNVQVDGSLIVTAEN 749

Query:   482 VMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVIL 541
              MGST   DNGE ILQYG RCG+CKL+NV V+N+GIDW+   N YW++DV   E  K+IL
Sbjct:   750 AMGSTTPNDNGEPILQYGLRCGKCKLHNVNVVNRGIDWNSKSNVYWRNDVNRLETCKIIL 809

Query:   542 HGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKIN 601
             HGNAEFEAS+VT++G+HVFEVPDGHKLKITSGN+GL + L+ +++ +M+TGSW+WNY++N
Sbjct:   810 HGNAEFEASNVTIEGHHVFEVPDGHKLKITSGNAGLSINLEALKEEVMETGSWYWNYQLN 869

Query:   602 GSHIVLELVEL 612
             GSHI L+ VE+
Sbjct:   870 GSHIHLQQVEV 880




GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
cd04193323 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl 3e-12
PLN02830615 PLN02830, PLN02830, UDP-sugar pyrophosphorylase 3e-11
cd06424315 cd06424, UGGPase, UGGPase catalyzes the synthesis 4e-11
COG4284472 COG4284, COG4284, UDP-glucose pyrophosphorylase [C 3e-08
PTZ00339482 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph 2e-05
cd04180266 cd04180, UGPase_euk_like, Eukaryotic UGPase-like i 0.004
>gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
 Score = 68.0 bits (167), Expect = 3e-12
 Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 33/224 (14%)

Query: 44  GGSADRLGLVDHETGECLPAAMLPYCG----RTLLEGLIRDLQAREFLYFKLYGKQCITP 99
           GG   RLG          P  M P  G    ++L +     +   + L  +  GK+   P
Sbjct: 23  GGQGTRLGF-------DGPKGMFP-VGLPSKKSLFQLQAERILKLQELAGEASGKKVPIP 74

Query: 100 VAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVC 159
             IMTS  +  HE      +   +FG        F+Q ++P VD  DG+ L+        
Sbjct: 75  WYIMTS--EATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVD-FDGKILLEEKGKIAM 131

Query: 160 KPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAG---IGLHHGK 216
            P G+G ++K     GI +     G K   V  V N+       L+ +A    IG    K
Sbjct: 132 APNGNGGLYKALQTAGILEDMKKRGIKYIHVYSVDNI-------LVKVADPVFIGFCISK 184

Query: 217 KLGFAS-CKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
                +   R    TE + V++     DGK       +EY+E  
Sbjct: 185 GADVGAKVVRKRYPTEKVGVVVLV---DGKPQV----VEYSEIS 221


UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase. Length = 323

>gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase Back     alignment and domain information
>gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 612
PLN02830615 UDP-sugar pyrophosphorylase 100.0
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 100.0
PLN02435493 probable UDP-N-acetylglucosamine pyrophosphorylase 100.0
PLN02474469 UTP--glucose-1-phosphate uridylyltransferase 100.0
PTZ00339482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 100.0
PF01704420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 100.0
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 100.0
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 100.0
KOG2388477 consensus UDP-N-acetylglucosamine pyrophosphorylas 100.0
KOG2638498 consensus UDP-glucose pyrophosphorylase [Carbohydr 100.0
COG4284472 UDP-glucose pyrophosphorylase [Carbohydrate transp 100.0
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 100.0
COG1207460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 98.09
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 97.9
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 97.7
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 97.62
PRK14352482 glmU bifunctional N-acetylglucosamine-1-phosphate 97.59
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 97.56
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 97.56
PRK14356456 glmU bifunctional N-acetylglucosamine-1-phosphate 97.55
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 97.54
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 97.53
cd04181217 NTP_transferase NTP_transferases catalyze the tran 97.53
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 97.53
PRK14360450 glmU bifunctional N-acetylglucosamine-1-phosphate 97.52
PRK14359430 glmU bifunctional N-acetylglucosamine-1-phosphate 97.45
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 97.44
PRK14353446 glmU bifunctional N-acetylglucosamine-1-phosphate 97.4
PLN02241436 glucose-1-phosphate adenylyltransferase 97.39
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 97.38
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 97.38
TIGR01173451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 97.36
PRK14355459 glmU bifunctional N-acetylglucosamine-1-phosphate 97.34
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 97.33
PRK14358481 glmU bifunctional N-acetylglucosamine-1-phosphate 97.28
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 97.25
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 97.25
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 97.23
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 97.2
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 97.17
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 97.13
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 97.06
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 97.05
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 97.02
TIGR00454183 conserved hypothetical protein TIGR00454. At this 97.01
PRK14357448 glmU bifunctional N-acetylglucosamine-1-phosphate 96.99
COG2266177 GTP:adenosylcobinamide-phosphate guanylyltransfera 96.93
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 96.86
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 96.82
PRK13385230 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 96.75
PRK14354458 glmU bifunctional N-acetylglucosamine-1-phosphate 96.71
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 96.67
PF01128221 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly 96.57
cd04182186 GT_2_like_f GT_2_like_f is a subfamily of the glyc 96.56
PLN02728252 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 96.53
PRK09451456 glmU bifunctional N-acetylglucosamine-1-phosphate 96.52
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 96.51
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 96.5
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 96.49
PRK10122297 GalU regulator GalF; Provisional 96.41
COG1213239 Predicted sugar nucleotidyltransferases [Cell enve 96.38
COG0746192 MobA Molybdopterin-guanine dinucleotide biosynthes 96.38
PF12804160 NTP_transf_3: MobA-like NTP transferase domain; PD 96.37
PRK13368238 3-deoxy-manno-octulosonate cytidylyltransferase; P 96.31
PRK00560196 molybdopterin-guanine dinucleotide biosynthesis pr 96.26
TIGR03310188 matur_ygfJ molybdenum hydroxylase accessory protei 96.16
cd02513223 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- 95.98
PRK14490369 putative bifunctional molybdopterin-guanine dinucl 95.95
TIGR02665186 molyb_mobA molybdopterin-guanine dinucleotide bios 95.9
cd02503181 MobA MobA catalyzes the formation of molybdopterin 95.9
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 95.8
TIGR01479468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 95.74
TIGR00453217 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 95.68
PRK02726200 molybdopterin-guanine dinucleotide biosynthesis pr 95.62
cd02516218 CDP-ME_synthetase CDP-ME synthetase is involved in 95.59
PRK00155227 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 95.58
PRK00317193 mobA molybdopterin-guanine dinucleotide biosynthes 95.55
TIGR03202190 pucB xanthine dehydrogenase accessory protein pucB 95.54
COG1208358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 95.42
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 95.29
PRK14489366 putative bifunctional molybdopterin-guanine dinucl 95.2
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 95.18
PLN02917293 CMP-KDO synthetase 95.08
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 95.05
PRK14500346 putative bifunctional molybdopterin-guanine dinucl 94.86
PRK09382378 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp 94.51
COG1211230 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt 94.49
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 94.08
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 93.97
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 93.94
TIGR00466238 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe 93.18
KOG1322371 consensus GDP-mannose pyrophosphorylase/mannose-1- 92.88
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 92.19
PRK15460478 cpsB mannose-1-phosphate guanyltransferase; Provis 91.68
cd02518233 GT2_SpsF SpsF is a glycosyltrnasferase implicated 91.3
COG1210291 GalU UDP-glucose pyrophosphorylase [Cell envelope 89.23
COG0836333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 86.09
COG4750231 LicC CTP:phosphocholine cytidylyltransferase invol 85.37
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
Probab=100.00  E-value=7.4e-110  Score=930.06  Aligned_cols=493  Identities=23%  Similarity=0.308  Sum_probs=444.3

Q ss_pred             eeeCCCccccCCChHHHHHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHH
Q 007226            7 EIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREF   86 (612)
Q Consensus         7 ~~~vP~g~~l~~~~~~~~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~   86 (612)
                      +|++|+|..++++++....++++|+++|+|+|||+||||||||||+++||+  +||++++  +|+||||++++||+++|+
T Consensus        99 ~P~vp~~~~~~~~~~~~~~~~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~--~lpv~~~--~gkt~lql~~e~I~~lq~  174 (615)
T PLN02830         99 TPSVPEGEVLEYGSEEFVELEEAGLREAGNAAFVLVAGGLGERLGYSGIKV--ALPTETA--TGTCYLQLYIESILALQE  174 (615)
T ss_pred             ccCCCccccccccchhhhHHHHHHHHHhCcEEEEEecCCcccccCCCCCCc--ceecccC--CCCcHHHHHHHHHHHHHH
Confidence            567899999988777666777899999999999999999999999999999  9999866  999999999999999999


Q ss_pred             HhHhhcC-CcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeec--CCCCcccCCC
Q 007226           87 LYFKLYG-KQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR--PFAPVCKPGG  163 (612)
Q Consensus        87 la~k~~g-~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~--~~~l~~~P~G  163 (612)
                      ||.++.+ ..+.||||||||+  +||++|++||++|+|||++++||+||+|+++||+++++|++++++  +++++|+|||
T Consensus       175 la~~~~~~~~~~IPl~IMTS~--~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~d~~~i~~~P~G  252 (615)
T PLN02830        175 RAKKRKAKKGRKIPLVIMTSD--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPNDPYKIQTKPHG  252 (615)
T ss_pred             HHHHhcccCCCCceEEEECCc--chhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCCCCCccccCCCC
Confidence            9987654 5589999999999  799999999999999999999999999999999998889999986  8899999999


Q ss_pred             CchHhHHHHhcCchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecC
Q 007226          164 HGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNL  242 (612)
Q Consensus       164 hGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~  242 (612)
                      |||||+||++||+||+|+++|+||+|||||||+|+++ ||.|   +|+++.++++|++++|+|  .++|++|++|+..+.
T Consensus       253 hGdi~~aL~~sGlLd~l~~~G~~yi~v~~vDN~L~~~Adp~f---lG~~~~~~~d~~~kvv~K--~~~E~vGvi~~~~~~  327 (615)
T PLN02830        253 HGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAA---LGVSATKGFDMNSLAVPR--KAKEAIGAIAKLTHK  327 (615)
T ss_pred             ccHHHHHHHHCCCHHHHHHcCCEEEEEEeccchhhhcccHHH---hHHHHhcCCceEEEEEEC--CCCcccceEEEEecC
Confidence            9999999999999999999999999999999999998 8855   899999999999998665  467899999985567


Q ss_pred             CCceecceEEEEecccCccC----cCCCCCCCCCccccccceeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeec
Q 007226          243 DGKWAYGLSCIEYTEFDKFG----ITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMD  318 (612)
Q Consensus       243 dG~~~~~~~vVEYsel~~~~----~~~~~~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D  318 (612)
                      ||++  +++||||+|++++.    .++++..++++++.||+||||||++|++|++++++ +.+.+|+++ |||    |+|
T Consensus       328 dG~~--l~~vVEYse~~~ll~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~-~~~~lp~iv-NpK----~~d  399 (615)
T PLN02830        328 DGRE--MVINVEYNQLDPLLRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAK-TGGVIEEFV-NPK----YKD  399 (615)
T ss_pred             CCCe--eeEEEeecccCHHHHhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHh-CCCccceec-cCc----ccC
Confidence            8873  56899999999883    34456666777999999999999999999999986 889999854 998    888


Q ss_pred             CCCCccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHH
Q 007226          319 NFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILR  398 (612)
Q Consensus       319 ~~g~~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~  398 (612)
                      .+ .+.++.++|||||||||++++..     .+++||++++||.+|+||||++++|++|++++ + +++||+|+++|+|+
T Consensus       400 ~~-~~v~q~~trle~~mq~f~~~~~~-----~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~-~-~~~~~~s~e~d~y~  471 (615)
T PLN02830        400 AT-KTAFKSPTRLECMMQDYPKTLPP-----SAKVGFTVFDNWLAYSPVKNSPADGAAKVPEG-N-PTHSATSGEMAIYG  471 (615)
T ss_pred             CC-CceeecchHHHHHHHHHhhhcCc-----ccccCceecCchheeccccCChHHhhhhcccC-C-CccCcchhhHHHHH
Confidence            76 45799999999999999999852     56899999999999999999999998888776 4 55599999999999


Q ss_pred             HHHHHHHHcCcccCccc----CCCcccccCCCeeEEeCCcccccHHHHhccc-CC-CCcCCCcEEEEEeceEEEeceEEE
Q 007226          399 NAYDILCQCHIKLPEIE----GNDKYIDDGPPYLILLHPALGLLWEVTRQKF-KG-GSVSKGSELQIEVAEFLWRNVQLD  472 (612)
Q Consensus       399 ~~~~~l~~~g~~v~~~~----~~~~~~~~~P~~~v~l~p~~~~~~~~~~~k~-~~-~si~~~s~L~veG~~~~~~~v~ld  472 (612)
                      +++++|..+|+.+..+.    +++++++.+|+  |.|+|+|+++++++++|| ++ ++|+++|+|+|+|+++||+||+||
T Consensus       472 ~~~llL~~s~~~~~~~~~~~~~~~~~~~~~P~--I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~Ld  549 (615)
T PLN02830        472 ANCLILRKAGADVEEPVEDVVFNGIEVEVGPR--IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLD  549 (615)
T ss_pred             HHHHHHHhcCCccccCccccccCCcccCCCCe--EEECchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEE
Confidence            99999999887765443    46788888997  999999999999999999 76 799999999999999999999999


Q ss_pred             EEEEEEeccCCCCceecCCCcceeeccceeceEEEeeeEEeeCcEEeeeCCC--------ceecccceeeeEEEEEEecc
Q 007226          473 GSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDN--------TYWKHDVQWFEALKVILHGN  544 (612)
Q Consensus       473 G~l~I~a~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~V~N~G~~~~~~~~--------~~w~~~~~r~e~~~i~~~g~  544 (612)
                      |+|+|.|.+  |+                  +|+|+|+.|+|+||+|++++.        .++...+.|.|..++++.-+
T Consensus       550 G~viI~a~~--~~------------------~~~i~g~~v~N~g~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~~  609 (615)
T PLN02830        550 GALVVRAVP--GA------------------EVTVGGLRVKNKGWTWEPVDKGTSAPEEIRIRGFVIKKVETAELVFDKP  609 (615)
T ss_pred             EEEEEEcCC--CC------------------eEEecCeEEecCCcEEEecCCCCCcchhhhhcceeEeeeeeEEEEecCC
Confidence            999999988  54                  788999999999999999643        67889999999999999998


Q ss_pred             ceeE
Q 007226          545 AEFE  548 (612)
Q Consensus       545 ~~f~  548 (612)
                      |.|.
T Consensus       610 g~~~  613 (615)
T PLN02830        610 GKYT  613 (615)
T ss_pred             Ccee
Confidence            8874



>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR00454 conserved hypothetical protein TIGR00454 Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] Back     alignment and domain information
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] Back     alignment and domain information
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B Back     alignment and domain information
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety Back     alignment and domain information
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional Back     alignment and domain information
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial Back     alignment and domain information
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>PLN02917 CMP-KDO synthetase Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional Back     alignment and domain information
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat Back     alignment and domain information
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
3oc9_A405 Crystal Structure Of Putative Udp-N-Acetylglucosami 4e-07
1jvd_A522 Crystal Structure Of Human Agx2 Complexed With Udpg 8e-04
1jv1_A505 Crystal Structure Of Human Agx1 Complexed With Udpg 9e-04
>pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 Back     alignment and structure

Iteration: 1

Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 8/159 (5%) Query: 40 IYPLGGSADRLGLVDHETGE-CLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCIT 98 I P GG RLG +H G LP + + E L+R LQ Y + K + Sbjct: 39 ITPAGGQGSRLGF-EHPKGMFVLPFEIPKSIFQMTSERLLR-LQELASEY--SHQKNVMI 94 Query: 99 PVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPV 158 +MT+ + E I + + ++FG F Q ++P VD +G+ L + P Sbjct: 95 HWFLMTN--EETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDF-NGKILYEKKDKPY 151 Query: 159 CKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVV 197 P GHG ++K D GI ++ ++ G K + V N++ Sbjct: 152 MAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNIL 190
>pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 Back     alignment and structure
>pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query612
3ogz_A630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 5e-56
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 1e-42
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 2e-40
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 2e-33
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 6e-33
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 7e-32
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 2e-25
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 2e-25
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 1e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 Back     alignment and structure
 Score =  199 bits (506), Expect = 5e-56
 Identities = 89/564 (15%), Positives = 154/564 (27%), Gaps = 88/564 (15%)

Query: 9   HVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPY 68
            +     L + T         G   L +   +   GG  +RLG    +    +  A    
Sbjct: 87  LIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETAT--- 143

Query: 69  CGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQ 128
              T L   +R  Q       ++ GK+   P  IMTS   + H+R   L   LR      
Sbjct: 144 -NTTYLAYYLRWAQ-------RVGGKE--VPFVIMTSD--DTHDRTLQL---LRELQLEV 188

Query: 129 SSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG------------- 175
            +  + +Q  V           +      + KP GHG +  L ++               
Sbjct: 189 PNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGT 248

Query: 176 -----IFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGAT 230
                +   +   G +     Q +N  A   +       +   H   + F    R     
Sbjct: 249 ATAQPLVNDWLAAGYESIVFIQDTNAGATITIP--ISLALSAEHSLDMNFTCIPRV--PK 304

Query: 231 EGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRG-----PFSSNGLQADFPANTNILY 285
           E I +L   K   G   + ++ +EY  F +             S     + FP + N L 
Sbjct: 305 EPIGLLCRTKKNSGD-PWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLV 363

Query: 286 VDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNT 345
             L+S        +       ++       Y D           R+E  MQ+IA  F   
Sbjct: 364 FKLSSY------VDRLRESHGIVPEFINPKYSDE-TRRSFKKPARIESLMQDIALLF--- 413

Query: 346 YSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILC 405
            S   Y+      + F     +    S  +     A  +                   L 
Sbjct: 414 -SEDDYRVGGTVFERFSYQPVK---NSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLK 469

Query: 406 QCHIKL-----PEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFK-----GGSVSKGS 455
              + L     PE+             +I+L         +              + + S
Sbjct: 470 AIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQHS 529

Query: 456 ELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNK 515
            L +E    +  +++L G+L I                             + N  V N 
Sbjct: 530 TLIVE-GRVIIESLELYGALTIRGPT-----------------DSMALPHVVRNAVVRNA 571

Query: 516 GIDWDCGDNTYWKHDVQWFEALKV 539
           G       +     D +  E  ++
Sbjct: 572 GWSVHAILSLCAGRDSRLSEVDRI 595


>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query612
3ogz_A630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 100.0
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 100.0
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 100.0
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 100.0
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 100.0
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 100.0
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 100.0
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 100.0
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 100.0
3st8_A501 Bifunctional protein GLMU; acetyltransferase, pyro 98.46
3oam_A252 3-deoxy-manno-octulosonate cytidylyltransferase; c 97.8
3brk_X420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 97.72
4ecm_A269 Glucose-1-phosphate thymidylyltransferase; HET: DA 97.66
1yp2_A451 Glucose-1-phosphate adenylyltransferase small subu 97.5
3juk_A281 UDP-glucose pyrophosphorylase (GALU); transfer; HE 97.48
1fxo_A293 Glucose-1-phosphate thymidylyltransferase; rhamnos 97.48
4fce_A459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 97.44
3tqd_A256 3-deoxy-manno-octulosonate cytidylyltransferase; c 97.43
2qh5_A308 PMI, ALGA, mannose-6-phosphate isomerase; structur 97.37
2v0h_A456 Bifunctional protein GLMU; cell WALL, magnesium, c 97.17
3k8d_A264 3-deoxy-manno-octulosonate cytidylyltransferase; K 97.15
1lvw_A295 Glucose-1-phosphate thymidylyltransferase; protein 97.14
1hm9_A468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 97.01
3pnn_A303 Conserved domain protein; structural genomics, PSI 96.91
1qwj_A229 Cytidine monophospho-N-acetylneuraminic acid synth 96.9
2wee_A197 MOBA-related protein; unknown function; 1.65A {Myc 96.86
4fcu_A253 3-deoxy-manno-octulosonate cytidylyltransferase; s 96.84
1tzf_A259 Glucose-1-phosphate cytidylyltransferase; nucleoti 96.83
2waw_A199 MOBA relate protein; unknown function; HET: PGE; 1 96.83
2xwl_A223 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 96.77
3q80_A231 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; 96.76
1vgw_A231 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; 96.71
1ezi_A228 CMP-N-acetylneuraminic acid synthetase; homodimer, 96.68
3f1c_A246 Putative 2-C-methyl-D-erythritol 4-phosphate cytid 96.6
1mc3_A296 Glucose-1-phosphate thymidylyltransferase; glucose 96.5
3rsb_A196 Adenosylcobinamide-phosphate guanylyltransferase; 96.5
2yc3_A228 2-C-methyl-D-erythritol 4-phosphate cytidylyltran 96.46
1i52_A236 4-diphosphocytidyl-2-C-methylerythritol synthase; 96.41
1vpa_A234 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; 96.38
1h7e_A245 3-deoxy-manno-octulosonate cytidylyltransferase; n 96.34
3d5n_A197 Q97W15_sulso; NESG, SSR125, structural genomics, P 96.29
2vsh_A236 TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly 96.27
1e5k_A201 Molybdopterin-guanine dinucleotide biosynthesis pr 96.22
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 96.17
2px7_A236 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 95.96
3ngw_A208 Molybdopterin-guanine dinucleotide biosynthesis P 95.94
1vic_A262 3-deoxy-manno-octulosonate cytidylyltransferase; s 95.86
2y6p_A234 3-deoxy-manno-octulosonate cytidylyltransferase; l 95.81
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 95.69
2e3d_A302 UTP--glucose-1-phosphate uridylyltransferase; UDP- 95.65
2ux8_A297 Glucose-1-phosphate uridylyltransferase; UGPG, GAL 95.44
2e8b_A201 Probable molybdopterin-guanine dinucleotide biosy 95.27
2xme_A232 CTP-inositol-1-phosphate cytidylyltransferase; CDP 95.24
2pa4_A323 UTP-glucose-1-phosphate uridylyltransferase; phosp 95.19
2x65_A336 Mannose-1-phosphate guanylyltransferase; nucleotid 94.85
1w55_A371 ISPD/ISPF bifunctional enzyme; biosynthetic pathwa 94.6
2cu2_A337 Putative mannose-1-phosphate guanylyl transferase; 93.65
2dpw_A232 Hypothetical protein TTHA0179; transferase, struct 93.14
2ggo_A401 401AA long hypothetical glucose-1-phosphate thymid 93.09
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-102  Score=865.33  Aligned_cols=485  Identities=19%  Similarity=0.158  Sum_probs=416.5

Q ss_pred             eeCCCccccCCChHHHHHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHH
Q 007226            8 IHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFL   87 (612)
Q Consensus         8 ~~vP~g~~l~~~~~~~~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~l   87 (612)
                      |.+|.+..++.+++...+++++|+++|+|+|||+||||||||||+++||+  +||++++  +|+||||++++||++    
T Consensus        86 P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~--~lpv~~~--s~ks~lql~~e~i~~----  157 (630)
T 3ogz_A           86 PLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKV--SLPVETA--TNTTYLAYYLRWAQR----  157 (630)
T ss_dssp             SCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGG--GSBSCTT--TCCBHHHHHHHHHHH----
T ss_pred             CCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcc--cceecCC--CCCcHHHHHHHHHHH----
Confidence            55677988988888888899999999999999999999999999999999  9999977  999999999999992    


Q ss_pred             hHhhcCCcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchH
Q 007226           88 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAI  167 (612)
Q Consensus        88 a~k~~g~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI  167 (612)
                         ++|  +.|||+||||+  +||++|++||++   ||++++||++|+|+++||+++++|+++++++++++|+|+||||+
T Consensus       158 ---~~g--~~iPl~IMTS~--~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv  227 (630)
T 3ogz_A          158 ---VGG--KEVPFVIMTSD--DTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDV  227 (630)
T ss_dssp             ---HHC--TTCCEEEEECT--TTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHH
T ss_pred             ---HhC--CCCcEEEEecc--cchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHH
Confidence               346  79999999999  799999999999   99999999999999999998788999999999999999999999


Q ss_pred             hHHHHhcC------------------chhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCC
Q 007226          168 WKLAHDKG------------------IFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSG  228 (612)
Q Consensus       168 ~~aL~~sG------------------lLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~  228 (612)
                      |.+|+++|                  +|++|+++|++|+||+||||+|+++ ||.|   +|+++.++++|++++|+|  .
T Consensus       228 ~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~---lG~~~~~~~d~~~kvv~r--~  302 (630)
T 3ogz_A          228 HSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPIS---LALSAEHSLDMNFTCIPR--V  302 (630)
T ss_dssp             HHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHH---HHHHHHTTCSEEEEEECC--C
T ss_pred             HHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHH---hHHHHhcCCCEEEEEEEC--C
Confidence            99999999                  9999999999999999999999887 9966   899999999999998765  3


Q ss_pred             CcccceEEEEEecCCCceecceEEEEecccCccCcC----CCC-CCCCCccccccceeeEEEEeHHHHHhhhcccccCCc
Q 007226          229 ATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT----RGP-FSSNGLQADFPANTNILYVDLASAELVGSSENERSL  303 (612)
Q Consensus       229 ~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~----~~~-~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~~~~l  303 (612)
                      ++|++|++|+.++.||++ ++++||||||++++.+.    +++ +.+.++++.||+|||||||+|++|.+.+.. ..+.+
T Consensus       303 p~E~vG~l~~~~~~dGk~-~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~-~~~~i  380 (630)
T 3ogz_A          303 PKEPIGLLCRTKKNSGDP-WLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE-SHGIV  380 (630)
T ss_dssp             SSCSSCEEEEEESSTTSC-CEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHH-HTTCC
T ss_pred             CCcceeeEEEEecCCCce-eeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHh-ccCcc
Confidence            678889999855679981 13478999999998643    233 444555889999999999999999988876 67889


Q ss_pred             cceeeecCCCceeecCCCCccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCC
Q 007226          304 PGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADM  383 (612)
Q Consensus       304 p~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~  383 (612)
                      |.++ |+|    |+|+.+ +.+++++||||||||++++|+.    ...++++++++| .+|+||||+..+|++|++++  
T Consensus       381 p~~v-NpK----~~d~~~-~~~~~~~qLEt~m~d~~~~F~~----~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g--  447 (630)
T 3ogz_A          381 PEFI-NPK----YSDETR-RSFKKPARIESLMQDIALLFSE----DDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQG--  447 (630)
T ss_dssp             CCEE-CCC----BSSSSS-CCBSSCBCEECCGGGGGGGCCT----TTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTT--
T ss_pred             ceec-CCc----ccCCcc-cccCcchhhhhHHHHHHHhccc----cCcceeEEEECC-CeeecccCChhHhhhhhccC--
Confidence            9666 988    999874 5788999999999999999852    233789999999 89999999999988887765  


Q ss_pred             CCCCChhhhHHHHHHHHHHHHHHcCcccCc---cc---CCCc-ccccCCCeeEEeCCccccc--HHHHhcccCC--C-Cc
Q 007226          384 SLHQTPDGSFLDILRNAYDILCQCHIKLPE---IE---GNDK-YIDDGPPYLILLHPALGLL--WEVTRQKFKG--G-SV  451 (612)
Q Consensus       384 ~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~---~~---~~~~-~~~~~P~~~v~l~p~~~~~--~~~~~~k~~~--~-si  451 (612)
                      .+++||+|+++|+|+++++||++||++++.   ++   +++. +++.+|+  |.|+|+|+++  ++++++||++  + +|
T Consensus       448 ~~~~sp~t~~~dly~~~~~~L~~aG~~v~~~~~~~~~~~~~~~~~~~~P~--i~l~p~~~~~~~~~~~~~k~~~~~~~~i  525 (630)
T 3ogz_A          448 NGAYCAATGEAAFYELQRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPI--IVLDTVCASSGSLDDLARVFPTPEKVHI  525 (630)
T ss_dssp             CCCCBHHHHHHHHHHHHHHHHHHTTCCCCCCCSCSEEETTTTEEECCCSE--EEECHHHHTTCCHHHHHHHCSSGGGEEE
T ss_pred             CCcCChHHHHHHHHHHHHHHHHHcCceecccccchhhhhcCccccCCCCE--EEEeccccccccHHHHHHHhCCCCCcee
Confidence            456799999999999999999999999884   22   4666 7889996  9999999999  9999999999  5 89


Q ss_pred             CCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCcceeeccceeceEEEeeeEEeeCcEEeeeC----CC---
Q 007226          452 SKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCG----DN---  524 (612)
Q Consensus       452 ~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~V~N~G~~~~~~----~~---  524 (612)
                      +++|+|+|+|+ ++|+||+|||+|+|.|++  |+..     .+         .|++++ +|+|+||+|.++    +.   
T Consensus       526 ~~~S~L~veg~-v~~~~l~LdG~lvI~a~~--~~~~-----~~---------~v~~~~-~v~n~g~~~~~~~~~~~~~~~  587 (630)
T 3ogz_A          526 DQHSTLIVEGR-VIIESLELYGALTIRGPT--DSMA-----LP---------HVVRNA-VVRNAGWSVHAILSLCAGRDS  587 (630)
T ss_dssp             CTTCEEEEESS-EEESCEEEESEEEEECCS--STTS-----CC---------EEECSE-EEECCCCEEEECCTTC----C
T ss_pred             cCCcEEEEEEE-EEEEEEEEeeEEEEEcCC--CCcc-----Cc---------eEEecc-eEecCCcEEEEcccccccccC
Confidence            99999999999 999999999999999998  5522     22         288888 999999999999    31   


Q ss_pred             ------ceecccceeeeEEEEEEeccceeEee
Q 007226          525 ------TYWKHDVQWFEALKVILHGNAEFEAS  550 (612)
Q Consensus       525 ------~~w~~~~~r~e~~~i~~~g~~~f~a~  550 (612)
                            +++...+.|.|.+.+.+.-++|++|.
T Consensus       588 ~~~~~~~irg~~~~~~e~~~~~~~~~~~~~~~  619 (630)
T 3ogz_A          588 RLSEVDRIRGFVLKKTAMAVMDCNTKGESEAG  619 (630)
T ss_dssp             CCCHHHHTTTEEEECCCCEEECC---------
T ss_pred             CCChhhcccceeEEeeeEEEEEecCCCccccC
Confidence                  67889999999999999999999874



>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* Back     alignment and structure
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 Back     alignment and structure
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* Back     alignment and structure
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 Back     alignment and structure
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A Back     alignment and structure
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A Back     alignment and structure
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* Back     alignment and structure
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} Back     alignment and structure
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* Back     alignment and structure
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* Back     alignment and structure
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Back     alignment and structure
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A Back     alignment and structure
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 Back     alignment and structure
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 Back     alignment and structure
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} Back     alignment and structure
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* Back     alignment and structure
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A Back     alignment and structure
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 Back     alignment and structure
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* Back     alignment and structure
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} Back     alignment and structure
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* Back     alignment and structure
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Back     alignment and structure
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} Back     alignment and structure
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} Back     alignment and structure
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* Back     alignment and structure
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Back     alignment and structure
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} Back     alignment and structure
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} Back     alignment and structure
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} Back     alignment and structure
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* Back     alignment and structure
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* Back     alignment and structure
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* Back     alignment and structure
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 Back     alignment and structure
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 612
d1jv1a_501 c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor 2e-37
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 9e-20
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]
 Score =  143 bits (362), Expect = 2e-37
 Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 33/325 (10%)

Query: 30  GIEGLPE--LGEIYPLGGSADRLGLVDHETGECLPAAMLP---YCGRTLLEGLIRDLQAR 84
           G+  + +  +  +   GG   RLG+         P  M        +TL +     +   
Sbjct: 94  GLFQISQNKVAVLLLAGGQGTRLGVAY-------PKGMYDVGLPSRKTLFQIQAERILKL 146

Query: 85  EFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDA 144
           + +  K YG +CI P  IMTS      E       + ++FG  + +   F+Q ++PA+  
Sbjct: 147 QQVAEKYYGNKCIIPWYIMTS--GRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS- 203

Query: 145 EDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTL 204
            DG+ ++         P G+G +++    + I +     G     V  V N++       
Sbjct: 204 FDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV--AD 261

Query: 205 LALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT 264
               G  +  G   G    ++++  TE + V+      DG        +EY+E      T
Sbjct: 262 PRFIGFCIQKGADCGAKVVEKTN-PTEPVGVVCRV---DGV----YQVVEYSEISLA--T 311

Query: 265 RGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTH 324
               SS+G       N    +  +     V  +  E  L   V   +K I Y+D  G   
Sbjct: 312 AQKRSSDGRLLFNAGNIANHFFTVPFLRDV-VNVYEPQLQHHV--AQKKIPYVDTQGQLI 368

Query: 325 ---SVPGGRLECTMQNIADNFLNTY 346
                 G ++E  + +I        
Sbjct: 369 KPDKPNGIKMEKFVFDIFQFAKKFV 393


>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query612
d1jv1a_501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 100.0
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 100.0
d2icya183 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 99.25
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 97.93
d1w77a1226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.55
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 97.49
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 97.46
d1g97a2250 N-acetylglucosamine 1-phosphate uridyltransferase 97.43
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 97.38
d2oi6a2248 N-acetylglucosamine 1-phosphate uridyltransferase 97.34
d1i52a_225 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.24
d1tzfa_259 Glucose-1-phosphate cytidylyltransferase RfbF {Sal 97.23
d1jyka_229 CTP:phosphocholine cytidylytransferase LicC {Strep 97.19
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 97.03
d1vgwa_226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 96.91
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 96.91
d1vpaa_221 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 96.9
d1e5ka_188 Molybdenum cofactor biosynthesis protein MobA {Esc 96.89
d2dpwa1231 Uncharacterized protein TTHA0179 {Thermus thermoph 95.23
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00  E-value=4.2e-83  Score=701.67  Aligned_cols=355  Identities=19%  Similarity=0.245  Sum_probs=317.7

Q ss_pred             CCChHHHHHHHHhhhhhcC--cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCC
Q 007226           17 SQNTEYAAQAALWGIEGLP--ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGK   94 (612)
Q Consensus        17 ~~~~~~~~~~~~~Gl~~l~--k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~   94 (612)
                      ..+.+....++++|+++|+  |+|+|+||||||||||+++||+  ++||+++  +|+||||++++||++++++|.+++|.
T Consensus        81 ~~~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~--~~~v~~~--~~ksllql~~e~i~~l~~~a~~~~~~  156 (501)
T d1jv1a_          81 TRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKG--MYDVGLP--SRKTLFQIQAERILKLQQVAEKYYGN  156 (501)
T ss_dssp             TTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGG--GCCCCCT--TCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCce--eeeeccC--CCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            4455656777789999995  8999999999999999999999  9999976  99999999999999999999888887


Q ss_pred             cceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhc
Q 007226           95 QCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDK  174 (612)
Q Consensus        95 ~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~s  174 (612)
                      .+.|||+||||+  +||++|++||++|+|||++++||++|+|+++||++ .+|+++++++++++|+|+||||||.+|++|
T Consensus       157 ~~~iPl~IMtS~--~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~~~~~~i~~~P~GhG~i~~aL~~s  233 (501)
T d1jv1a_         157 KCIIPWYIMTSG--RTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQ  233 (501)
T ss_dssp             CCCCCEEEEECT--TTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCEEETTEECEEECCGGGHHHHHHHT
T ss_pred             CCCceEEEECCh--hHhHHHHHHHHhccccCCCcCceEEEEecCcceEC-CCCCcccCCCCcccccCCCchHHHHHHHHC
Confidence            789999999999  69999999999999999999999999999999998 679999999999999999999999999999


Q ss_pred             CchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEE
Q 007226          175 GIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCI  253 (612)
Q Consensus       175 GlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vV  253 (612)
                      |+|++|+++|++|++|+||||+|+++ ||.|   +|+++..++++++++ ++|+.++|++|+||+   .||+    +++|
T Consensus       234 G~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~---lG~~~~~~~~~~~kv-v~k~~~~e~~G~l~~---~dg~----~~vv  302 (501)
T d1jv1a_         234 NIVEDMEQRGIWSIHVYCVDNILVKVADPRF---IGFCIQKGADCGAKV-VEKTNPTEPVGVVCR---VDGV----YQVV  302 (501)
T ss_dssp             THHHHHHHTTCCEEEEEETTBTTCCTTCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ETTE----EEEE
T ss_pred             CcHHHHHHCCCEEEEEEecCCccccccCHHH---HHHHHhcccceeEEE-EEcCCCCcccceEEE---ECCe----EEEE
Confidence            99999999999999999999999886 9966   899999999999997 556779999999998   7999    9999


Q ss_pred             EecccCccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCCc---cccCce
Q 007226          254 EYTEFDKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDT---HSVPGG  329 (612)
Q Consensus       254 EYsel~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~~---~~~~~~  329 (612)
                      ||+|+|++...+ ..++|  .+.|++ |||||||+++||+++++. ....||+|++.|  ||||+|.+|..   ..++++
T Consensus       303 Eysel~~~~~~~-~~~~g--~l~f~~~Ni~~~~fsl~fl~~~~~~-~~~~l~~hva~K--ki~~~d~~~~~~~p~~~n~i  376 (501)
T d1jv1a_         303 EYSEISLATAQK-RSSDG--RLLFNAGNIANHFFTVPFLRDVVNV-YEPQLQHHVAQK--KIPYVDTQGQLIKPDKPNGI  376 (501)
T ss_dssp             CGGGSCHHHHHC-BCTTS--SBSSCEEEEEEEEEEHHHHHHHHHT-TGGGCCCEEEEE--CCCEECTTSCEECCSSCCEE
T ss_pred             EeccCCHHHHhh-ccCCC--cccccccceeheeeEHHHHHHHHHh-cccCCCceEecc--ccCccCCCCCcccCCCCcch
Confidence            999999997654 23344  468876 999999999999999975 567899999774  59999988753   245779


Q ss_pred             eeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCc
Q 007226          330 RLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHI  409 (612)
Q Consensus       330 rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~  409 (612)
                      |||+||||++..+        .++++++++|+.+||||||+++..          ..+||+||+.|+++.+++||.++|+
T Consensus       377 klE~fifD~~~~~--------~~~~~~~V~R~~eFaPvKN~~~~~----------~~dsp~ta~~~l~~~~~~wl~~aG~  438 (501)
T d1jv1a_         377 KMEKFVFDIFQFA--------KKFVVYEVLREDEFSPLKNADSQN----------GKDNPTTARHALMSLHHCWVLNAGG  438 (501)
T ss_dssp             EEECCGGGGGGGC--------SSEEEEEECHHHHCCBCCSCTTSS----------SSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHhc--------cceEEEEEchhhccccccCCCCCC----------CCCCHHHHHHHHHHHhHHHHHHcCC
Confidence            9999999988775        368899999999999999987542          1239999999999999999999998


Q ss_pred             ccCc
Q 007226          410 KLPE  413 (612)
Q Consensus       410 ~v~~  413 (612)
                      .+..
T Consensus       439 ~~~~  442 (501)
T d1jv1a_         439 HFID  442 (501)
T ss_dssp             EEBC
T ss_pred             eEec
Confidence            8753



>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure