Citrus Sinensis ID: 007226
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| 224109282 | 877 | predicted protein [Populus trichocarpa] | 0.998 | 0.696 | 0.844 | 0.0 | |
| 225448507 | 860 | PREDICTED: uncharacterized protein LOC10 | 0.998 | 0.710 | 0.825 | 0.0 | |
| 255574832 | 884 | conserved hypothetical protein [Ricinus | 1.0 | 0.692 | 0.805 | 0.0 | |
| 147794750 | 866 | hypothetical protein VITISV_024684 [Viti | 0.998 | 0.705 | 0.816 | 0.0 | |
| 356568154 | 857 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.711 | 0.795 | 0.0 | |
| 356539993 | 766 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.796 | 0.796 | 0.0 | |
| 357461351 | 868 | hypothetical protein MTR_3g071440 [Medic | 0.995 | 0.701 | 0.780 | 0.0 | |
| 18410414 | 883 | UDP-glucose pyrophosphorylase 3 [Arabido | 0.996 | 0.690 | 0.749 | 0.0 | |
| 297820348 | 883 | hypothetical protein ARALYDRAFT_486043 [ | 0.996 | 0.690 | 0.744 | 0.0 | |
| 7573499 | 871 | putative protein [Arabidopsis thaliana] | 0.977 | 0.686 | 0.734 | 0.0 |
| >gi|224109282|ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/611 (84%), Positives = 564/611 (92%)
Query: 1 MECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGEC 60
MECQFLEIH PSGLDLS+NTEYA+QAALWGIEGLP+LGEIYPLGGSADRLGLVD +TGEC
Sbjct: 266 MECQFLEIHAPSGLDLSKNTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPDTGEC 325
Query: 61 LPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCER 120
LPAAMLPYCGRTLLEGLIRDLQAREFLYFK+YGKQCITPVAIMTSSAKNNHE ITSLCER
Sbjct: 326 LPAAMLPYCGRTLLEGLIRDLQAREFLYFKIYGKQCITPVAIMTSSAKNNHEHITSLCER 385
Query: 121 LRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWF 180
L WFGRGQSSFQLFEQPLVPA+ AEDGQWLV +PFAPVCKPGGHG IWKLA+DKGIF+WF
Sbjct: 386 LSWFGRGQSSFQLFEQPLVPAISAEDGQWLVTKPFAPVCKPGGHGVIWKLAYDKGIFEWF 445
Query: 181 HDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKK 240
+D+ RKGATVRQVSNVVAATDLTLLALAGIGL H KKLGFASCKR+SGATEGINVLIEKK
Sbjct: 446 YDHDRKGATVRQVSNVVAATDLTLLALAGIGLRHRKKLGFASCKRNSGATEGINVLIEKK 505
Query: 241 NLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENE 300
NLDG+WAYGLSCIEYTEFDKF IT GP S+NGLQA+FPANTNILYVDL S ELV SS NE
Sbjct: 506 NLDGQWAYGLSCIEYTEFDKFEITGGPCSTNGLQAEFPANTNILYVDLPSLELVASSNNE 565
Query: 301 RSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDT 360
+SLPGMVLNTKKPIVYMD++G+ HSV GGRLECTMQNIADNF NTY SRCYKGVED LDT
Sbjct: 566 KSLPGMVLNTKKPIVYMDHYGNCHSVYGGRLECTMQNIADNFTNTYLSRCYKGVEDKLDT 625
Query: 361 FMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKY 420
F+VYNERRRVTSSAK+KR+ +D +LHQTPDG+ LDILRNAYD+L C I+LP+IEGNDKY
Sbjct: 626 FIVYNERRRVTSSAKRKRRHSDNTLHQTPDGALLDILRNAYDLLSHCDIELPQIEGNDKY 685
Query: 421 IDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAE 480
++ GPP+LI LHPALG LWEVTRQKF GGS+SKGSELQIEVAEF WRNVQLDGSLII+AE
Sbjct: 686 VESGPPFLIYLHPALGPLWEVTRQKFNGGSISKGSELQIEVAEFSWRNVQLDGSLIIIAE 745
Query: 481 NVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVI 540
NVMGSTRI NGE ILQYG RCGRC+L NVKV+NKGI+W GDN YWKHDVQ FEALKVI
Sbjct: 746 NVMGSTRIDPNGEPILQYGNRCGRCRLQNVKVVNKGINWSFGDNIYWKHDVQRFEALKVI 805
Query: 541 LHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKI 600
LHGNAEFEA +VT+QGN +FE+PDG+K+KITSG+SGL VQL+P+EQ +MD+GSWHWNYKI
Sbjct: 806 LHGNAEFEADNVTIQGNQIFEIPDGYKMKITSGDSGLQVQLNPLEQKIMDSGSWHWNYKI 865
Query: 601 NGSHIVLELVE 611
+GSHI LELVE
Sbjct: 866 HGSHIQLELVE 876
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448507|ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera] gi|297736576|emb|CBI25447.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255574832|ref|XP_002528323.1| conserved hypothetical protein [Ricinus communis] gi|223532278|gb|EEF34081.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|147794750|emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356568154|ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788781 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356539993|ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804343 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357461351|ref|XP_003600957.1| hypothetical protein MTR_3g071440 [Medicago truncatula] gi|355490005|gb|AES71208.1| hypothetical protein MTR_3g071440 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|18410414|ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gi|332645948|gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297820348|ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] gi|297323895|gb|EFH54316.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|7573499|emb|CAB87858.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 612 | ||||||
| TAIR|locus:2082038 | 883 | UGP3 "UDP-glucose pyrophosphor | 0.995 | 0.689 | 0.734 | 2.4e-257 | |
| TAIR|locus:2149574 | 614 | USP "UDP-sugar pyrophosphoryla | 0.751 | 0.749 | 0.233 | 1.1e-08 |
| TAIR|locus:2082038 UGP3 "UDP-glucose pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2477 (877.0 bits), Expect = 2.4e-257, P = 2.4e-257
Identities = 449/611 (73%), Positives = 524/611 (85%)
Query: 3 CQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLP 62
CQ+LE+H PS LDL+Q +YA+QAALWGIEGLP+LGEIYPLGG+ADRLGL+D ETGECLP
Sbjct: 271 CQYLEMHTPSVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAADRLGLIDSETGECLP 330
Query: 63 AAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLR 122
AAML +CGRTLLEGLIRDLQAREFLYFKLYGKQC+TPVAIMTS+AKNNHE ++SLCERL+
Sbjct: 331 AAMLAHCGRTLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAKNNHEHVSSLCERLK 390
Query: 123 WFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHD 182
WFGRGQS+F+LFEQPLVPAV AEDGQW+V +PF PV KPGGHG IWKLA+DKG+F WF+D
Sbjct: 391 WFGRGQSNFRLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIWKLAYDKGVFNWFYD 450
Query: 183 NGRKGATVRQVSNVVXXXXXXXXXXXGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNL 242
+GRKGATVRQVSNVV GIGL + KKLGFASCKR++GATEGINVL+EKKN
Sbjct: 451 HGRKGATVRQVSNVVAATDVTLLALAGIGLRYNKKLGFASCKRNAGATEGINVLMEKKNF 510
Query: 243 DGKWAYGLSCIEYTEFDKFGIT-RGPFSSNGLQADFPANTNILYVDLASAELVGSSENER 301
DGKW YG+SCIEYTEFDKF I+ R P SSNGLQADFPANTNILYVDL SAEL+GSS N +
Sbjct: 511 DGKWEYGISCIEYTEFDKFDISNRSP-SSNGLQADFPANTNILYVDLHSAELIGSSSNAK 569
Query: 302 SLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTF 361
SLP MVLNTKK I Y+D +GD HSV GGRLECTMQNIADNF N + SRC+ +ED LDT+
Sbjct: 570 SLPNMVLNTKKRIEYLDQYGDYHSVMGGRLECTMQNIADNFFNKFPSRCHGSLEDKLDTY 629
Query: 362 MVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYI 421
+VYNERR+VTSSAKKK+ A +LHQTPDG+ LDILRN YD+L +C IKLP IE NDKY+
Sbjct: 630 IVYNERRKVTSSAKKKKPHASAALHQTPDGALLDILRNGYDLLTECDIKLPMIEANDKYV 689
Query: 422 DDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAEN 481
D PPYLILLHPALG LWEV+RQKFKGGS+S SELQ+E+AEF W NVQ+DGSLI+ AEN
Sbjct: 690 DSPPPYLILLHPALGPLWEVSRQKFKGGSISSCSELQLEIAEFSWNNVQVDGSLIVTAEN 749
Query: 482 VMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVIL 541
MGST DNGE ILQYG RCG+CKL+NV V+N+GIDW+ N YW++DV E K+IL
Sbjct: 750 AMGSTTPNDNGEPILQYGLRCGKCKLHNVNVVNRGIDWNSKSNVYWRNDVNRLETCKIIL 809
Query: 542 HGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKIN 601
HGNAEFEAS+VT++G+HVFEVPDGHKLKITSGN+GL + L+ +++ +M+TGSW+WNY++N
Sbjct: 810 HGNAEFEASNVTIEGHHVFEVPDGHKLKITSGNAGLSINLEALKEEVMETGSWYWNYQLN 869
Query: 602 GSHIVLELVEL 612
GSHI L+ VE+
Sbjct: 870 GSHIHLQQVEV 880
|
|
| TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 3e-12 | |
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 3e-11 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 4e-11 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 3e-08 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 2e-05 | |
| cd04180 | 266 | cd04180, UGPase_euk_like, Eukaryotic UGPase-like i | 0.004 |
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 3e-12
Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 33/224 (14%)
Query: 44 GGSADRLGLVDHETGECLPAAMLPYCG----RTLLEGLIRDLQAREFLYFKLYGKQCITP 99
GG RLG P M P G ++L + + + L + GK+ P
Sbjct: 23 GGQGTRLGF-------DGPKGMFP-VGLPSKKSLFQLQAERILKLQELAGEASGKKVPIP 74
Query: 100 VAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVC 159
IMTS + HE + +FG F+Q ++P VD DG+ L+
Sbjct: 75 WYIMTS--EATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVD-FDGKILLEEKGKIAM 131
Query: 160 KPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAG---IGLHHGK 216
P G+G ++K GI + G K V V N+ L+ +A IG K
Sbjct: 132 APNGNGGLYKALQTAGILEDMKKRGIKYIHVYSVDNI-------LVKVADPVFIGFCISK 184
Query: 217 KLGFAS-CKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ R TE + V++ DGK +EY+E
Sbjct: 185 GADVGAKVVRKRYPTEKVGVVVLV---DGKPQV----VEYSEIS 221
|
UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase. Length = 323 |
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 98.09 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.9 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.7 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.62 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.59 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 97.56 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 97.56 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.55 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 97.54 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 97.53 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 97.53 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 97.53 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.52 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.45 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 97.44 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.4 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 97.39 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 97.38 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 97.38 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 97.36 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.34 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.33 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.28 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 97.25 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 97.25 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 97.23 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 97.2 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.17 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 97.13 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 97.06 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 97.05 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 97.02 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 97.01 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.99 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 96.93 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 96.86 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 96.82 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.75 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.71 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 96.67 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.57 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 96.56 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.53 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.52 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 96.51 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 96.5 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 96.49 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 96.41 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 96.38 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 96.38 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 96.37 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 96.31 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.26 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 96.16 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 95.98 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 95.95 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 95.9 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 95.9 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 95.8 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 95.74 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.68 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 95.62 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 95.59 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.58 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 95.55 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 95.54 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 95.42 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 95.29 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 95.2 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 95.18 | |
| PLN02917 | 293 | CMP-KDO synthetase | 95.08 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 95.05 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 94.86 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 94.51 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 94.49 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 94.08 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 93.97 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 93.94 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 93.18 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 92.88 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 92.19 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 91.68 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 91.3 | |
| COG1210 | 291 | GalU UDP-glucose pyrophosphorylase [Cell envelope | 89.23 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 86.09 | |
| COG4750 | 231 | LicC CTP:phosphocholine cytidylyltransferase invol | 85.37 |
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-110 Score=930.06 Aligned_cols=493 Identities=23% Similarity=0.308 Sum_probs=444.3
Q ss_pred eeeCCCccccCCChHHHHHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHH
Q 007226 7 EIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREF 86 (612)
Q Consensus 7 ~~~vP~g~~l~~~~~~~~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~ 86 (612)
+|++|+|..++++++....++++|+++|+|+|||+||||||||||+++||+ +||++++ +|+||||++++||+++|+
T Consensus 99 ~P~vp~~~~~~~~~~~~~~~~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~--~lpv~~~--~gkt~lql~~e~I~~lq~ 174 (615)
T PLN02830 99 TPSVPEGEVLEYGSEEFVELEEAGLREAGNAAFVLVAGGLGERLGYSGIKV--ALPTETA--TGTCYLQLYIESILALQE 174 (615)
T ss_pred ccCCCccccccccchhhhHHHHHHHHHhCcEEEEEecCCcccccCCCCCCc--ceecccC--CCCcHHHHHHHHHHHHHH
Confidence 567899999988777666777899999999999999999999999999999 9999866 999999999999999999
Q ss_pred HhHhhcC-CcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeec--CCCCcccCCC
Q 007226 87 LYFKLYG-KQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR--PFAPVCKPGG 163 (612)
Q Consensus 87 la~k~~g-~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~--~~~l~~~P~G 163 (612)
||.++.+ ..+.||||||||+ +||++|++||++|+|||++++||+||+|+++||+++++|++++++ +++++|+|||
T Consensus 175 la~~~~~~~~~~IPl~IMTS~--~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~d~~~i~~~P~G 252 (615)
T PLN02830 175 RAKKRKAKKGRKIPLVIMTSD--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPNDPYKIQTKPHG 252 (615)
T ss_pred HHHHhcccCCCCceEEEECCc--chhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCCCCCccccCCCC
Confidence 9987654 5589999999999 799999999999999999999999999999999998889999986 8899999999
Q ss_pred CchHhHHHHhcCchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecC
Q 007226 164 HGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNL 242 (612)
Q Consensus 164 hGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~ 242 (612)
|||||+||++||+||+|+++|+||+|||||||+|+++ ||.| +|+++.++++|++++|+| .++|++|++|+..+.
T Consensus 253 hGdi~~aL~~sGlLd~l~~~G~~yi~v~~vDN~L~~~Adp~f---lG~~~~~~~d~~~kvv~K--~~~E~vGvi~~~~~~ 327 (615)
T PLN02830 253 HGDVHALLYSSGLLDKWLSAGKKWVVFFQDTNGLVFKAIPAA---LGVSATKGFDMNSLAVPR--KAKEAIGAIAKLTHK 327 (615)
T ss_pred ccHHHHHHHHCCCHHHHHHcCCEEEEEEeccchhhhcccHHH---hHHHHhcCCceEEEEEEC--CCCcccceEEEEecC
Confidence 9999999999999999999999999999999999998 8855 899999999999998665 467899999985567
Q ss_pred CCceecceEEEEecccCccC----cCCCCCCCCCccccccceeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeec
Q 007226 243 DGKWAYGLSCIEYTEFDKFG----ITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMD 318 (612)
Q Consensus 243 dG~~~~~~~vVEYsel~~~~----~~~~~~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D 318 (612)
||++ +++||||+|++++. .++++..++++++.||+||||||++|++|++++++ +.+.+|+++ ||| |+|
T Consensus 328 dG~~--l~~vVEYse~~~ll~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~-~~~~lp~iv-NpK----~~d 399 (615)
T PLN02830 328 DGRE--MVINVEYNQLDPLLRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAK-TGGVIEEFV-NPK----YKD 399 (615)
T ss_pred CCCe--eeEEEeecccCHHHHhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHh-CCCccceec-cCc----ccC
Confidence 8873 56899999999883 34456666777999999999999999999999986 889999854 998 888
Q ss_pred CCCCccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHH
Q 007226 319 NFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILR 398 (612)
Q Consensus 319 ~~g~~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~ 398 (612)
.+ .+.++.++|||||||||++++.. .+++||++++||.+|+||||++++|++|++++ + +++||+|+++|+|+
T Consensus 400 ~~-~~v~q~~trle~~mq~f~~~~~~-----~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~-~-~~~~~~s~e~d~y~ 471 (615)
T PLN02830 400 AT-KTAFKSPTRLECMMQDYPKTLPP-----SAKVGFTVFDNWLAYSPVKNSPADGAAKVPEG-N-PTHSATSGEMAIYG 471 (615)
T ss_pred CC-CceeecchHHHHHHHHHhhhcCc-----ccccCceecCchheeccccCChHHhhhhcccC-C-CccCcchhhHHHHH
Confidence 76 45799999999999999999852 56899999999999999999999998888776 4 55599999999999
Q ss_pred HHHHHHHHcCcccCccc----CCCcccccCCCeeEEeCCcccccHHHHhccc-CC-CCcCCCcEEEEEeceEEEeceEEE
Q 007226 399 NAYDILCQCHIKLPEIE----GNDKYIDDGPPYLILLHPALGLLWEVTRQKF-KG-GSVSKGSELQIEVAEFLWRNVQLD 472 (612)
Q Consensus 399 ~~~~~l~~~g~~v~~~~----~~~~~~~~~P~~~v~l~p~~~~~~~~~~~k~-~~-~si~~~s~L~veG~~~~~~~v~ld 472 (612)
+++++|..+|+.+..+. +++++++.+|+ |.|+|+|+++++++++|| ++ ++|+++|+|+|+|+++||+||+||
T Consensus 472 ~~~llL~~s~~~~~~~~~~~~~~~~~~~~~P~--I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~Ld 549 (615)
T PLN02830 472 ANCLILRKAGADVEEPVEDVVFNGIEVEVGPR--IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLD 549 (615)
T ss_pred HHHHHHHhcCCccccCccccccCCcccCCCCe--EEECchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEE
Confidence 99999999887765443 46788888997 999999999999999999 76 799999999999999999999999
Q ss_pred EEEEEEeccCCCCceecCCCcceeeccceeceEEEeeeEEeeCcEEeeeCCC--------ceecccceeeeEEEEEEecc
Q 007226 473 GSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDN--------TYWKHDVQWFEALKVILHGN 544 (612)
Q Consensus 473 G~l~I~a~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~V~N~G~~~~~~~~--------~~w~~~~~r~e~~~i~~~g~ 544 (612)
|+|+|.|.+ |+ +|+|+|+.|+|+||+|++++. .++...+.|.|..++++.-+
T Consensus 550 G~viI~a~~--~~------------------~~~i~g~~v~N~g~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~~ 609 (615)
T PLN02830 550 GALVVRAVP--GA------------------EVTVGGLRVKNKGWTWEPVDKGTSAPEEIRIRGFVIKKVETAELVFDKP 609 (615)
T ss_pred EEEEEEcCC--CC------------------eEEecCeEEecCCcEEEecCCCCCcchhhhhcceeEeeeeeEEEEecCC
Confidence 999999988 54 788999999999999999643 67889999999999999998
Q ss_pred ceeE
Q 007226 545 AEFE 548 (612)
Q Consensus 545 ~~f~ 548 (612)
|.|.
T Consensus 610 g~~~ 613 (615)
T PLN02830 610 GKYT 613 (615)
T ss_pred Ccee
Confidence 8874
|
|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG4750 LicC CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 612 | ||||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 4e-07 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 8e-04 | ||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 9e-04 |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
|
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 612 | |||
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 5e-56 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 1e-42 | |
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 2e-40 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 2e-33 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 6e-33 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 7e-32 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 2e-25 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 2e-25 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 1e-24 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 |
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
Score = 199 bits (506), Expect = 5e-56
Identities = 89/564 (15%), Positives = 154/564 (27%), Gaps = 88/564 (15%)
Query: 9 HVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPY 68
+ L + T G L + + GG +RLG + + A
Sbjct: 87 LIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETAT--- 143
Query: 69 CGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQ 128
T L +R Q ++ GK+ P IMTS + H+R L LR
Sbjct: 144 -NTTYLAYYLRWAQ-------RVGGKE--VPFVIMTSD--DTHDRTLQL---LRELQLEV 188
Query: 129 SSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG------------- 175
+ + +Q V + + KP GHG + L ++
Sbjct: 189 PNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGT 248
Query: 176 -----IFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGAT 230
+ + G + Q +N A + + H + F R
Sbjct: 249 ATAQPLVNDWLAAGYESIVFIQDTNAGATITIP--ISLALSAEHSLDMNFTCIPRV--PK 304
Query: 231 EGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRG-----PFSSNGLQADFPANTNILY 285
E I +L K G + ++ +EY F + S + FP + N L
Sbjct: 305 EPIGLLCRTKKNSGD-PWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLV 363
Query: 286 VDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNT 345
L+S + ++ Y D R+E MQ+IA F
Sbjct: 364 FKLSSY------VDRLRESHGIVPEFINPKYSDE-TRRSFKKPARIESLMQDIALLF--- 413
Query: 346 YSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILC 405
S Y+ + F + S + A + L
Sbjct: 414 -SEDDYRVGGTVFERFSYQPVK---NSLEEAAGLVAQGNGAYCAATGEAAFYELQRRRLK 469
Query: 406 QCHIKL-----PEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFK-----GGSVSKGS 455
+ L PE+ +I+L + + + S
Sbjct: 470 AIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKVHIDQHS 529
Query: 456 ELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNK 515
L +E + +++L G+L I + N V N
Sbjct: 530 TLIVE-GRVIIESLELYGALTIRGPT-----------------DSMALPHVVRNAVVRNA 571
Query: 516 GIDWDCGDNTYWKHDVQWFEALKV 539
G + D + E ++
Sbjct: 572 GWSVHAILSLCAGRDSRLSEVDRI 595
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 98.46 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.8 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 97.72 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 97.66 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 97.5 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 97.48 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 97.48 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 97.44 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.43 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 97.37 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 97.17 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 97.15 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 97.14 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 97.01 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 96.91 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 96.9 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 96.86 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 96.84 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 96.83 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 96.83 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.77 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 96.76 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 96.71 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 96.68 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 96.6 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 96.5 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 96.5 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 96.46 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 96.41 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.38 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 96.34 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 96.29 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.27 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 96.22 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 96.17 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 95.96 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 95.94 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 95.86 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 95.81 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 95.69 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 95.65 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 95.44 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 95.27 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 95.24 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 95.19 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 94.85 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 94.6 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 93.65 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 93.14 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 93.09 |
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-102 Score=865.33 Aligned_cols=485 Identities=19% Similarity=0.158 Sum_probs=416.5
Q ss_pred eeCCCccccCCChHHHHHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHH
Q 007226 8 IHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFL 87 (612)
Q Consensus 8 ~~vP~g~~l~~~~~~~~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~l 87 (612)
|.+|.+..++.+++...+++++|+++|+|+|||+||||||||||+++||+ +||++++ +|+||||++++||++
T Consensus 86 P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~--~lpv~~~--s~ks~lql~~e~i~~---- 157 (630)
T 3ogz_A 86 PLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKV--SLPVETA--TNTTYLAYYLRWAQR---- 157 (630)
T ss_dssp SCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGG--GSBSCTT--TCCBHHHHHHHHHHH----
T ss_pred CCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcc--cceecCC--CCCcHHHHHHHHHHH----
Confidence 55677988988888888899999999999999999999999999999999 9999977 999999999999992
Q ss_pred hHhhcCCcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchH
Q 007226 88 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAI 167 (612)
Q Consensus 88 a~k~~g~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI 167 (612)
++| +.|||+||||+ +||++|++||++ ||++++||++|+|+++||+++++|+++++++++++|+|+||||+
T Consensus 158 ---~~g--~~iPl~IMTS~--~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv 227 (630)
T 3ogz_A 158 ---VGG--KEVPFVIMTSD--DTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDV 227 (630)
T ss_dssp ---HHC--TTCCEEEEECT--TTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHH
T ss_pred ---HhC--CCCcEEEEecc--cchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHH
Confidence 346 79999999999 799999999999 99999999999999999998788999999999999999999999
Q ss_pred hHHHHhcC------------------chhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCC
Q 007226 168 WKLAHDKG------------------IFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSG 228 (612)
Q Consensus 168 ~~aL~~sG------------------lLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~ 228 (612)
|.+|+++| +|++|+++|++|+||+||||+|+++ ||.| +|+++.++++|++++|+| .
T Consensus 228 ~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~---lG~~~~~~~d~~~kvv~r--~ 302 (630)
T 3ogz_A 228 HSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPIS---LALSAEHSLDMNFTCIPR--V 302 (630)
T ss_dssp HHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHH---HHHHHHTTCSEEEEEECC--C
T ss_pred HHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHH---hHHHHhcCCCEEEEEEEC--C
Confidence 99999999 9999999999999999999999887 9966 899999999999998765 3
Q ss_pred CcccceEEEEEecCCCceecceEEEEecccCccCcC----CCC-CCCCCccccccceeeEEEEeHHHHHhhhcccccCCc
Q 007226 229 ATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT----RGP-FSSNGLQADFPANTNILYVDLASAELVGSSENERSL 303 (612)
Q Consensus 229 ~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~----~~~-~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~~~~l 303 (612)
++|++|++|+.++.||++ ++++||||||++++.+. +++ +.+.++++.||+|||||||+|++|.+.+.. ..+.+
T Consensus 303 p~E~vG~l~~~~~~dGk~-~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~-~~~~i 380 (630)
T 3ogz_A 303 PKEPIGLLCRTKKNSGDP-WLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE-SHGIV 380 (630)
T ss_dssp SSCSSCEEEEEESSTTSC-CEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHH-HTTCC
T ss_pred CCcceeeEEEEecCCCce-eeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHh-ccCcc
Confidence 678889999855679981 13478999999998643 233 444555889999999999999999988876 67889
Q ss_pred cceeeecCCCceeecCCCCccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCC
Q 007226 304 PGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADM 383 (612)
Q Consensus 304 p~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~ 383 (612)
|.++ |+| |+|+.+ +.+++++||||||||++++|+. ...++++++++| .+|+||||+..+|++|++++
T Consensus 381 p~~v-NpK----~~d~~~-~~~~~~~qLEt~m~d~~~~F~~----~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g-- 447 (630)
T 3ogz_A 381 PEFI-NPK----YSDETR-RSFKKPARIESLMQDIALLFSE----DDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQG-- 447 (630)
T ss_dssp CCEE-CCC----BSSSSS-CCBSSCBCEECCGGGGGGGCCT----TTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTT--
T ss_pred ceec-CCc----ccCCcc-cccCcchhhhhHHHHHHHhccc----cCcceeEEEECC-CeeecccCChhHhhhhhccC--
Confidence 9666 988 999874 5788999999999999999852 233789999999 89999999999988887765
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHcCcccCc---cc---CCCc-ccccCCCeeEEeCCccccc--HHHHhcccCC--C-Cc
Q 007226 384 SLHQTPDGSFLDILRNAYDILCQCHIKLPE---IE---GNDK-YIDDGPPYLILLHPALGLL--WEVTRQKFKG--G-SV 451 (612)
Q Consensus 384 ~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~---~~---~~~~-~~~~~P~~~v~l~p~~~~~--~~~~~~k~~~--~-si 451 (612)
.+++||+|+++|+|+++++||++||++++. ++ +++. +++.+|+ |.|+|+|+++ ++++++||++ + +|
T Consensus 448 ~~~~sp~t~~~dly~~~~~~L~~aG~~v~~~~~~~~~~~~~~~~~~~~P~--i~l~p~~~~~~~~~~~~~k~~~~~~~~i 525 (630)
T 3ogz_A 448 NGAYCAATGEAAFYELQRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPI--IVLDTVCASSGSLDDLARVFPTPEKVHI 525 (630)
T ss_dssp CCCCBHHHHHHHHHHHHHHHHHHTTCCCCCCCSCSEEETTTTEEECCCSE--EEECHHHHTTCCHHHHHHHCSSGGGEEE
T ss_pred CCcCChHHHHHHHHHHHHHHHHHcCceecccccchhhhhcCccccCCCCE--EEEeccccccccHHHHHHHhCCCCCcee
Confidence 456799999999999999999999999884 22 4666 7889996 9999999999 9999999999 5 89
Q ss_pred CCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCcceeeccceeceEEEeeeEEeeCcEEeeeC----CC---
Q 007226 452 SKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCG----DN--- 524 (612)
Q Consensus 452 ~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~V~N~G~~~~~~----~~--- 524 (612)
+++|+|+|+|+ ++|+||+|||+|+|.|++ |+.. .+ .|++++ +|+|+||+|.++ +.
T Consensus 526 ~~~S~L~veg~-v~~~~l~LdG~lvI~a~~--~~~~-----~~---------~v~~~~-~v~n~g~~~~~~~~~~~~~~~ 587 (630)
T 3ogz_A 526 DQHSTLIVEGR-VIIESLELYGALTIRGPT--DSMA-----LP---------HVVRNA-VVRNAGWSVHAILSLCAGRDS 587 (630)
T ss_dssp CTTCEEEEESS-EEESCEEEESEEEEECCS--STTS-----CC---------EEECSE-EEECCCCEEEECCTTC----C
T ss_pred cCCcEEEEEEE-EEEEEEEEeeEEEEEcCC--CCcc-----Cc---------eEEecc-eEecCCcEEEEcccccccccC
Confidence 99999999999 999999999999999998 5522 22 288888 999999999999 31
Q ss_pred ------ceecccceeeeEEEEEEeccceeEee
Q 007226 525 ------TYWKHDVQWFEALKVILHGNAEFEAS 550 (612)
Q Consensus 525 ------~~w~~~~~r~e~~~i~~~g~~~f~a~ 550 (612)
+++...+.|.|.+.+.+.-++|++|.
T Consensus 588 ~~~~~~~irg~~~~~~e~~~~~~~~~~~~~~~ 619 (630)
T 3ogz_A 588 RLSEVDRIRGFVLKKTAMAVMDCNTKGESEAG 619 (630)
T ss_dssp CCCHHHHTTTEEEECCCCEEECC---------
T ss_pred CCChhhcccceeEEeeeEEEEEecCCCccccC
Confidence 67889999999999999999999874
|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 612 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 2e-37 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 9e-20 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 143 bits (362), Expect = 2e-37
Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 33/325 (10%)
Query: 30 GIEGLPE--LGEIYPLGGSADRLGLVDHETGECLPAAMLP---YCGRTLLEGLIRDLQAR 84
G+ + + + + GG RLG+ P M +TL + +
Sbjct: 94 GLFQISQNKVAVLLLAGGQGTRLGVAY-------PKGMYDVGLPSRKTLFQIQAERILKL 146
Query: 85 EFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDA 144
+ + K YG +CI P IMTS E + ++FG + + F+Q ++PA+
Sbjct: 147 QQVAEKYYGNKCIIPWYIMTS--GRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS- 203
Query: 145 EDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTL 204
DG+ ++ P G+G +++ + I + G V V N++
Sbjct: 204 FDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKV--AD 261
Query: 205 LALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT 264
G + G G ++++ TE + V+ DG +EY+E T
Sbjct: 262 PRFIGFCIQKGADCGAKVVEKTN-PTEPVGVVCRV---DGV----YQVVEYSEISLA--T 311
Query: 265 RGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTH 324
SS+G N + + V + E L V +K I Y+D G
Sbjct: 312 AQKRSSDGRLLFNAGNIANHFFTVPFLRDV-VNVYEPQLQHHV--AQKKIPYVDTQGQLI 368
Query: 325 ---SVPGGRLECTMQNIADNFLNTY 346
G ++E + +I
Sbjct: 369 KPDKPNGIKMEKFVFDIFQFAKKFV 393
|
| >d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 612 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d2icya1 | 83 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 99.25 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 97.93 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.55 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 97.49 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 97.46 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.43 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 97.38 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.34 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.24 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 97.23 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 97.19 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 97.03 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 96.91 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 96.91 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 96.9 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 96.89 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 95.23 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=4.2e-83 Score=701.67 Aligned_cols=355 Identities=19% Similarity=0.245 Sum_probs=317.7
Q ss_pred CCChHHHHHHHHhhhhhcC--cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCC
Q 007226 17 SQNTEYAAQAALWGIEGLP--ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGK 94 (612)
Q Consensus 17 ~~~~~~~~~~~~~Gl~~l~--k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~ 94 (612)
..+.+....++++|+++|+ |+|+|+||||||||||+++||+ ++||+++ +|+||||++++||++++++|.+++|.
T Consensus 81 ~~~~~~~~~~~~~G~~~i~~gkvavvllaGG~GTRLG~~~pK~--~~~v~~~--~~ksllql~~e~i~~l~~~a~~~~~~ 156 (501)
T d1jv1a_ 81 TRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKG--MYDVGLP--SRKTLFQIQAERILKLQQVAEKYYGN 156 (501)
T ss_dssp TTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGG--GCCCCCT--TCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred ccChHHHHHHHHhhHHHHhcCCEEEEEECCCccccCCCCCCce--eeeeccC--CCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455656777789999995 8999999999999999999999 9999976 99999999999999999999888887
Q ss_pred cceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhc
Q 007226 95 QCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDK 174 (612)
Q Consensus 95 ~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~s 174 (612)
.+.|||+||||+ +||++|++||++|+|||++++||++|+|+++||++ .+|+++++++++++|+|+||||||.+|++|
T Consensus 157 ~~~iPl~IMtS~--~T~~~t~~~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~~~~~~i~~~P~GhG~i~~aL~~s 233 (501)
T d1jv1a_ 157 KCIIPWYIMTSG--RTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQ 233 (501)
T ss_dssp CCCCCEEEEECT--TTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCEEETTEECEEECCGGGHHHHHHHT
T ss_pred CCCceEEEECCh--hHhHHHHHHHHhccccCCCcCceEEEEecCcceEC-CCCCcccCCCCcccccCCCchHHHHHHHHC
Confidence 789999999999 69999999999999999999999999999999998 679999999999999999999999999999
Q ss_pred CchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEE
Q 007226 175 GIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCI 253 (612)
Q Consensus 175 GlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vV 253 (612)
|+|++|+++|++|++|+||||+|+++ ||.| +|+++..++++++++ ++|+.++|++|+||+ .||+ +++|
T Consensus 234 G~ld~l~~~Gi~yi~v~~vDN~l~~~~Dp~~---lG~~~~~~~~~~~kv-v~k~~~~e~~G~l~~---~dg~----~~vv 302 (501)
T d1jv1a_ 234 NIVEDMEQRGIWSIHVYCVDNILVKVADPRF---IGFCIQKGADCGAKV-VEKTNPTEPVGVVCR---VDGV----YQVV 302 (501)
T ss_dssp THHHHHHHTTCCEEEEEETTBTTCCTTCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ETTE----EEEE
T ss_pred CcHHHHHHCCCEEEEEEecCCccccccCHHH---HHHHHhcccceeEEE-EEcCCCCcccceEEE---ECCe----EEEE
Confidence 99999999999999999999999886 9966 899999999999997 556779999999998 7999 9999
Q ss_pred EecccCccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCCc---cccCce
Q 007226 254 EYTEFDKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDT---HSVPGG 329 (612)
Q Consensus 254 EYsel~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~~---~~~~~~ 329 (612)
||+|+|++...+ ..++| .+.|++ |||||||+++||+++++. ....||+|++.| ||||+|.+|.. ..++++
T Consensus 303 Eysel~~~~~~~-~~~~g--~l~f~~~Ni~~~~fsl~fl~~~~~~-~~~~l~~hva~K--ki~~~d~~~~~~~p~~~n~i 376 (501)
T d1jv1a_ 303 EYSEISLATAQK-RSSDG--RLLFNAGNIANHFFTVPFLRDVVNV-YEPQLQHHVAQK--KIPYVDTQGQLIKPDKPNGI 376 (501)
T ss_dssp CGGGSCHHHHHC-BCTTS--SBSSCEEEEEEEEEEHHHHHHHHHT-TGGGCCCEEEEE--CCCEECTTSCEECCSSCCEE
T ss_pred EeccCCHHHHhh-ccCCC--cccccccceeheeeEHHHHHHHHHh-cccCCCceEecc--ccCccCCCCCcccCCCCcch
Confidence 999999997654 23344 468876 999999999999999975 567899999774 59999988753 245779
Q ss_pred eeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCc
Q 007226 330 RLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHI 409 (612)
Q Consensus 330 rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~ 409 (612)
|||+||||++..+ .++++++++|+.+||||||+++.. ..+||+||+.|+++.+++||.++|+
T Consensus 377 klE~fifD~~~~~--------~~~~~~~V~R~~eFaPvKN~~~~~----------~~dsp~ta~~~l~~~~~~wl~~aG~ 438 (501)
T d1jv1a_ 377 KMEKFVFDIFQFA--------KKFVVYEVLREDEFSPLKNADSQN----------GKDNPTTARHALMSLHHCWVLNAGG 438 (501)
T ss_dssp EEECCGGGGGGGC--------SSEEEEEECHHHHCCBCCSCTTSS----------SSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhc--------cceEEEEEchhhccccccCCCCCC----------CCCCHHHHHHHHHHHhHHHHHHcCC
Confidence 9999999988775 368899999999999999987542 1239999999999999999999998
Q ss_pred ccCc
Q 007226 410 KLPE 413 (612)
Q Consensus 410 ~v~~ 413 (612)
.+..
T Consensus 439 ~~~~ 442 (501)
T d1jv1a_ 439 HFID 442 (501)
T ss_dssp EEBC
T ss_pred eEec
Confidence 8753
|
| >d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
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| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
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| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
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| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
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| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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