Citrus Sinensis ID: 007238


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-
MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQLSS
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHccccEEEEEEccccccccccccccEEEcHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccEEEccccccccccEEccccccccccccccccccccccccccccEEEEEEcccHHEEEccccccccccEEEEEEccccccccccccccccccEEcccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccEEEEcccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccEEEEEEccccccccHHHHHHHHHHcccEEEEEccccccccEEEEcccHHHHHcHHHHHHHcccccEEEEEEccEEEccccccccccccccccccccEEEccc
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccHccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHcccccEEEEEEccccccccccccEEEEcHHHHHHccccHHHHcccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccHHHcccccccccEEEEcccccccEEEcccccccccccccccccHHHHccccccccEEEcccccEEEEEccccccccHHHHHHHHccccccccccccccccccEEcccccEcEcccHHHHccccHHHccccccccccHHHHHHHHHHHHHHHHHHcccEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHcHHccccccccccccccEEcccccccccccccccccccHHcccHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHHHEEEEEcccccccccEEcccHHHHHHHHHHHHHHcccccEEEEEEccEEEEHHHHHcccccHEEEEccHHEEEccc
mlvqdrtlpkspksqirtsshrfsdsksldfstwVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQsksqehspnaiplpvinwnsiqpiadkssvysrfrseKWIVVSvdryptdsLKKLVKIKgwqvlaignsrtpknwnlkGAIFLSLDMqanlgfrvldflpydsyvrKSCGYLFAIQHGAKkifdaddrgdvigddlgkhfdvelvgegarqETILQyshenpnrtivnpyvhfgqrsvwprglplenvgeisheefytevfggkQFIQQGisnglpdvdsvfyftrkpsleafdirfddrvpkvalpqgmmvpvnsfntIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGyvvvypptvhrydkieaypfseekdlHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVgyqqprlmsleldrprasighgdrkefvprklpsvhlgveetgTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFsrytsaegflflqdDTILNYWNLLQADKNKLWITDKVLYLQLSS
mlvqdrtlpkspksqirtsshrfsdsksldfstWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWivvsvdryptdslkklvkikgwqvlaignsrtpknwNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPsleafdirfdDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRasighgdrkefvprklpsvhlgveetgtvsYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQAdknklwitDKVLYLQLSS
MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKivtvllliatiaalSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFdaddrgdvigddlgKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQLSS
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLI**********AIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLEL**************FVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQ***
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASL***********************************FRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLE*******************KLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQL**
****************************LDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQLSS
***************************SLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQLS*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLVQDRTLPKSPKSQIRTSSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAALSFLRNFTDTASLIQSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPNRTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNKLWITDKVLYLQLSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
255582589 814 conserved hypothetical protein [Ricinus 0.985 0.739 0.810 0.0
225441834 762 PREDICTED: uncharacterized protein LOC10 0.986 0.791 0.817 0.0
147852317 762 hypothetical protein VITISV_011873 [Viti 0.986 0.791 0.815 0.0
449437678 762 PREDICTED: uncharacterized protein LOC10 0.988 0.792 0.800 0.0
224087016 771 predicted protein [Populus trichocarpa] 0.986 0.782 0.810 0.0
224139872 771 predicted protein [Populus trichocarpa] 0.988 0.783 0.790 0.0
356500503 759 PREDICTED: uncharacterized protein LOC10 0.985 0.793 0.775 0.0
297739659 726 unnamed protein product [Vitis vinifera] 0.927 0.780 0.792 0.0
18405801 771 uncharacterized protein [Arabidopsis tha 0.988 0.783 0.776 0.0
15230300 765 uncharacterized protein [Arabidopsis tha 0.988 0.789 0.774 0.0
>gi|255582589|ref|XP_002532077.1| conserved hypothetical protein [Ricinus communis] gi|223528259|gb|EEF30311.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1044 bits (2699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/612 (81%), Positives = 551/612 (90%), Gaps = 10/612 (1%)

Query: 2   LVQDRTLPKSPKSQIRT-------SSHRFSDSKSLDFSTWVRDNLFKIVTVLLLIATIAA 54
           +VQ+R  PKSPKS   T       +++RFS SKSLDFSTW  +NL+KI+    LIAT+AA
Sbjct: 50  VVQERATPKSPKSPRTTLPTVNHHNNYRFSPSKSLDFSTWFTENLYKIIICFFLIATVAA 109

Query: 55  LSFLRNFTDTASLI--QSKSQEHSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVS 112
           + F RN  DTA+ +  QSKSQ      +P P INWN I+PI D +S +  FR+E+WIV S
Sbjct: 110 VFFFRNTGDTAAFLYLQSKSQPIE-KTLPFPHINWNQIKPITDSASPFVNFRTERWIVAS 168

Query: 113 VDRYPTDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDS 172
           V  YP+DSLKKLVKIKGWQ+LAIGNS+TPK W LKG I+LSL+ QA+LGFRV+DF+P+DS
Sbjct: 169 VSDYPSDSLKKLVKIKGWQLLAIGNSKTPKGWALKGCIYLSLEQQASLGFRVVDFVPFDS 228

Query: 173 YVRKSCGYLFAIQHGAKKIFDADDRGDVIGDDLGKHFDVELVGEGARQETILQYSHENPN 232
           YVRKS GYLFAIQHGAKKIFDADDRG+VIGDDLGKHFDVELVGEGARQETILQYSHEN N
Sbjct: 229 YVRKSVGYLFAIQHGAKKIFDADDRGEVIGDDLGKHFDVELVGEGARQETILQYSHENEN 288

Query: 233 RTIVNPYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFY 292
           RT+VNPY+HFGQRSVWPRGLPLENVGEI HEEFYT+VFGGKQFIQQGISNGLPDVDSVFY
Sbjct: 289 RTVVNPYIHFGQRSVWPRGLPLENVGEIGHEEFYTQVFGGKQFIQQGISNGLPDVDSVFY 348

Query: 293 FTRKPSLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVL 352
           FTRK  LE+FDIRFD+  PKVALPQG+MVP+NSFNTIYQSSAFW LMLPVSVSTMASDVL
Sbjct: 349 FTRKSGLESFDIRFDEHAPKVALPQGIMVPLNSFNTIYQSSAFWGLMLPVSVSTMASDVL 408

Query: 353 RGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHR 412
           RG+WGQRLLWEIGGYVVVYPPTVHRYD+IEAYPFSEEKDLHVNVGRLIKFL++WRS KHR
Sbjct: 409 RGYWGQRLLWEIGGYVVVYPPTVHRYDRIEAYPFSEEKDLHVNVGRLIKFLIAWRSTKHR 468

Query: 413 FFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR 472
            FEK+LELS++MAEEGFWTE+DVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR
Sbjct: 469 LFEKILELSYAMAEEGFWTEQDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDR 528

Query: 473 KEFVPRKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYG 532
           +EF+PRKLPSVHLGVEE GTV+YEIGNLIRWRKNFGN+VLIMFC+GPVERTALEWRLLYG
Sbjct: 529 REFIPRKLPSVHLGVEEIGTVNYEIGNLIRWRKNFGNIVLIMFCTGPVERTALEWRLLYG 588

Query: 533 RIFKTVIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQ 592
           RIFKTV+ILS+QKNEDLAVE G LEQ+YRHLPKIF R+TSAEGFLFL+DDT+LNYWNLLQ
Sbjct: 589 RIFKTVVILSQQKNEDLAVEEGNLEQLYRHLPKIFDRFTSAEGFLFLKDDTVLNYWNLLQ 648

Query: 593 ADKNKLWITDKV 604
           ADK+KLWITDKV
Sbjct: 649 ADKSKLWITDKV 660




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441834|ref|XP_002284060.1| PREDICTED: uncharacterized protein LOC100264133 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147852317|emb|CAN82225.1| hypothetical protein VITISV_011873 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449437678|ref|XP_004136618.1| PREDICTED: uncharacterized protein LOC101214137 [Cucumis sativus] gi|449523175|ref|XP_004168600.1| PREDICTED: uncharacterized protein LOC101224948 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224087016|ref|XP_002308029.1| predicted protein [Populus trichocarpa] gi|222854005|gb|EEE91552.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224139872|ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|222867948|gb|EEF05079.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356500503|ref|XP_003519071.1| PREDICTED: uncharacterized protein LOC100786801 [Glycine max] Back     alignment and taxonomy information
>gi|297739659|emb|CBI29841.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18405801|ref|NP_565960.1| uncharacterized protein [Arabidopsis thaliana] gi|2335100|gb|AAC02770.1| expressed protein [Arabidopsis thaliana] gi|15810461|gb|AAL07118.1| unknown protein [Arabidopsis thaliana] gi|330254936|gb|AEC10030.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15230300|ref|NP_191301.1| uncharacterized protein [Arabidopsis thaliana] gi|6706413|emb|CAB66099.1| putative protein [Arabidopsis thaliana] gi|53828547|gb|AAU94383.1| At3g57420 [Arabidopsis thaliana] gi|59958348|gb|AAX12884.1| At3g57420 [Arabidopsis thaliana] gi|110739068|dbj|BAF01451.1| hypothetical protein [Arabidopsis thaliana] gi|332646132|gb|AEE79653.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query611
TAIR|locus:2103473 765 AT3G57420 [Arabidopsis thalian 0.988 0.789 0.747 6.9e-253
TAIR|locus:2054371 771 AT2G41770 "AT2G41770" [Arabido 0.986 0.782 0.747 7.9e-252
WB|WBGene00022654 802 ZK105.3 [Caenorhabditis elegan 0.579 0.441 0.304 1.4e-49
WB|WBGene00010168 800 F56H6.7 [Caenorhabditis elegan 0.564 0.431 0.320 8.1e-49
WB|WBGene00018502 798 F46F5.11 [Caenorhabditis elega 0.600 0.459 0.301 9.9e-49
WB|WBGene00017173 806 F02C9.2 [Caenorhabditis elegan 0.666 0.504 0.288 5.3e-48
WB|WBGene00008472 805 E03H4.4 [Caenorhabditis elegan 0.612 0.464 0.301 4.1e-47
WB|WBGene00010170 803 F56H6.9 [Caenorhabditis elegan 0.569 0.433 0.298 1.9e-46
WB|WBGene00018914 796 F56A4.6 [Caenorhabditis elegan 0.603 0.463 0.301 6.7e-46
WB|WBGene00021574 779 Y45G12C.11 [Caenorhabditis ele 0.415 0.326 0.295 2e-41
TAIR|locus:2103473 AT3G57420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2435 (862.2 bits), Expect = 6.9e-253, P = 6.9e-253
 Identities = 454/607 (74%), Positives = 515/607 (84%)

Query:     1 MLVQDRTLPKSPKSQIRT--SSHRFSDSKSLDFSTWVRDNLFKXXXXXXXXXXXXXXSFL 58
             MLVQDR  PK PKS+IR   S  RF++ K LDFS+WV DN+++               FL
Sbjct:     1 MLVQDRVAPKPPKSRIRELPSRDRFAEPKILDFSSWVSDNVYRIVIIFLFIVTVAAFFFL 60

Query:    59 RNFTDTASLIQSKSQE-HSPNAIPLPVINWNSIQPIADKSSVYSRFRSEKWIVVSVDRYP 117
              N TDTASL+  +SQ   S  ++  P INWNSIQ ++DK+S Y+ FR+EKWIVVSV ++P
Sbjct:    61 YNTTDTASLLCFQSQSTQSLQSLTRPQINWNSIQIVSDKTSPYASFRTEKWIVVSVTKHP 120

Query:   118 TDSLKKLVKIKGWQVLAIGNSRTPKNWNLKGAIFLSLDMQANLGFRVLDFLPYDSYVRKS 177
             T+ LK LVKIKGWQVLAIGNS TPK+WNLKGAIFLSLD QA L +R+LD LPYDS+VRKS
Sbjct:   121 TEELKGLVKIKGWQVLAIGNSLTPKDWNLKGAIFLSLDAQAELNYRILDHLPYDSFVRKS 180

Query:   178 CGYLFAIQHGAKKIFXXXXXXXXXXXXXXKHFDVELVGEGARQETILQYSHENPNRTIVN 237
              GYLFAIQHGAKKIF              KHFDVELVGE ARQE ILQYSHENPNRT+VN
Sbjct:   181 VGYLFAIQHGAKKIFDADDRGEVIDGDLGKHFDVELVGEDARQEPILQYSHENPNRTVVN 240

Query:   238 PYVHFGQRSVWPRGLPLENVGEISHEEFYTEVFGGKQFIQQGISNGLPDVDSVFYFTRKP 297
             PY+HFGQRSVWPRGLPLENVGEI+HEE+YTEVFGGKQFIQQGISNGLPDVDSV+Y TRK 
Sbjct:   241 PYIHFGQRSVWPRGLPLENVGEINHEEYYTEVFGGKQFIQQGISNGLPDVDSVYYSTRKT 300

Query:   298 SLEAFDIRFDDRVPKVALPQGMMVPVNSFNTIYQSSAFWALMLPVSVSTMASDVLRGFWG 357
             + E FDIRFD+  PKVALPQGMMVPVNSFNT+Y SSAFW LMLPVSVS+MASDV+RG+WG
Sbjct:   301 TFEPFDIRFDEHSPKVALPQGMMVPVNSFNTLYHSSAFWGLMLPVSVSSMASDVIRGYWG 360

Query:   358 QRLLWEIGGYVVVYPPTVHRYDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNKHRFFEKV 417
             QRLLWE+GGYV VYPPTVHRYD++EAYPFS+EKDLH+NVGRLIKFL++WRSNKHRFFE +
Sbjct:   361 QRLLWELGGYVAVYPPTVHRYDRVEAYPFSDEKDLHINVGRLIKFLLAWRSNKHRFFETI 420

Query:   418 LELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVP 477
             L+LS  MAE+GFWTE DVKFTAAWLQDL+ VGYQQPRLMSLELDRPRA+IGHGDRKEFVP
Sbjct:   421 LDLSFVMAEQGFWTELDVKFTAAWLQDLLMVGYQQPRLMSLELDRPRATIGHGDRKEFVP 480

Query:   478 RKLPSVHLGVEETGTVSYEIGNLIRWRKNFGNVVLIMFCSGPVERTALEWRLLYGRIFKT 537
             RKLPSVHLGVEE GTVS EIGNLI+WRKNFGNVVLIMFC+GPVERTALEWRLLYGRIFKT
Sbjct:   481 RKLPSVHLGVEEIGTVSSEIGNLIKWRKNFGNVVLIMFCNGPVERTALEWRLLYGRIFKT 540

Query:   538 VIILSEQKNEDLAVEAGQLEQVYRHLPKIFSRYTSAEGFLFLQDDTILNYWNLLQADKNK 597
             V+ILS +KN DL V+  +L+ +Y+ LPKIF RY+SA+GF+F++DDT+LNYWNLLQADK K
Sbjct:   541 VVILSSRKNSDLYVQEAKLDHIYKRLPKIFDRYSSADGFVFVEDDTVLNYWNLLQADKTK 600

Query:   598 LWITDKV 604
             LW TDKV
Sbjct:   601 LWTTDKV 607




GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005618 "cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2054371 AT2G41770 "AT2G41770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00022654 ZK105.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00010168 F56H6.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00018502 F46F5.11 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00017173 F02C9.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00008472 E03H4.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00010170 F56H6.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00018914 F56A4.6 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00021574 Y45G12C.11 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
pfam03385 390 pfam03385, DUF288, Protein of unknown function, DU 1e-07
>gnl|CDD|217526 pfam03385, DUF288, Protein of unknown function, DUF288 Back     alignment and domain information
 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 15/118 (12%)

Query: 349 SDVLRGFWGQRLLWEIGGYVVVYPPT-------VHRYDKIEAYPFSEEKDLHVNVGRLIK 401
           +D+ R F  Q++L  + G  V + PT        H Y K     F +EK ++ + G++I+
Sbjct: 3   TDIWRSFISQKIL-HLSGLTVSFVPTNAVQFRNAHNYLK----DFKDEKQVYEDSGKMIE 57

Query: 402 FLVSW---RSNKHRFFEKVLELSHSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLM 456
           FL +W     N       + +L + + +   W + D      +L DL  +G++ P L+
Sbjct: 58  FLHNWKCSTENSTVLENCIKQLLNDLVKVKLWGKEDASLMEMFLNDLKNMGFEFPSLL 115


Length = 390

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 611
PF03385390 DUF288: Protein of unknown function, DUF288; Inter 100.0
PLN03180346 reversibly glycosylated polypeptide; Provisional 100.0
PF03214348 RGP: Reversibly glycosylated polypeptide; InterPro 100.0
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function Back     alignment and domain information
Probab=100.00  E-value=3.7e-86  Score=684.97  Aligned_cols=247  Identities=36%  Similarity=0.628  Sum_probs=231.5

Q ss_pred             cchhhHHHHHHHHHHHHcCcEEEEcCCeeeeecCCCCC--CCchhhhHHHhhhHHHHHhccccCCcc---CHHHHHHHHH
Q 007238          347 MASDVLRGFWGQRLLWEIGGYVVVYPPTVHRYDKIEAY--PFSEEKDLHVNVGRLIKFLVSWRSNKH---RFFEKVLELS  421 (611)
Q Consensus       347 R~tDIWRsY~aQrlLw~~G~~v~F~pP~v~q~RN~H~y--DF~dE~~ly~~sg~lv~fL~~W~~~~~---~l~e~i~~L~  421 (611)
                      ||||||||||+|||||++|++|+|+||+|+|+||+|+|  ||+||+|+|+++|+||+||++|+|+.+   ++++||++|+
T Consensus         1 RvTDIWRSY~aQRLLW~~G~~VsF~PpnV~Q~RNaHdYLkDF~DEk~LY~~sG~LV~FL~~W~~~~~n~~~L~~~Il~L~   80 (390)
T PF03385_consen    1 RVTDIWRSYWAQRLLWLSGGTVSFVPPNVVQFRNAHDYLKDFKDEKDLYEDSGRLVEFLHEWRCSKGNSSTLFECILDLY   80 (390)
T ss_pred             CchhHHHHHHHHHHHHHcCCeEEEcCCceeecccccccccchHHHHHHHHhHHHHHHHHHhcCCCCCchhhHHHHHHHHH
Confidence            89999999999999999999999999999999999999  999999999999999999999999754   6899999999


Q ss_pred             HHHHHcCCcchhhHHHHHHHHHHHHhcCCCCCcccccccCCCC-CCCCCCCCC--------cc---cCCCCCcccccccc
Q 007238          422 HSMAEEGFWTERDVKFTAAWLQDLIAVGYQQPRLMSLELDRPR-ASIGHGDRK--------EF---VPRKLPSVHLGVEE  489 (611)
Q Consensus       422 ~~l~e~gfw~~~Dv~l~~aWL~DL~~vGy~~P~l~~~~~~~~~-~~~~~~~~~--------~f---~p~~~~~~~~~~~~  489 (611)
                      ++|+|+|||+++|++||+|||+||++|||+||+|++.++++|| +|.+|++|+        ||   +|++.  +.+++++
T Consensus        81 ~~m~e~GfW~~~Dv~L~~AWL~DL~sVGY~fP~L~~~~~~dpYs~s~net~R~vNCRRm~leF~lvdp~~~--~~~~~~r  158 (390)
T PF03385_consen   81 VAMAEEGFWGEEDVKLMQAWLQDLKSVGYKFPRLRSEEYRDPYSPSTNETSRDVNCRRMHLEFELVDPKKE--ESQNIKR  158 (390)
T ss_pred             HHHHHcCCCcHHHHHHHHHHHHHHHHHHhhchhhhhcccCCCCCCCCCccccccccccccceeeccCCccc--ccHHHHH
Confidence            9999999999999999999999999999999999999999999 666777775        66   77775  4678999


Q ss_pred             ccchhhcccchhhhhcccC----------------------------CEEEEEEcCccccccHHHHHHHhhccccEEEEe
Q 007238          490 TGTVSYEIGNLIRWRKNFG----------------------------NVVLIMFCSGPVERTALEWRLLYGRIFKTVIIL  541 (611)
Q Consensus       490 ~~~~~~~~g~~~~W~~~~g----------------------------n~VLIi~~n~P~~~~~~~~r~lY~~~F~~VIf~  541 (611)
                      |.||++|||||++||+++|                            |+||||||||||+++||++||||||||++||||
T Consensus       159 a~qKlnyFGDl~~WC~etg~s~~~~~fpsp~QL~~~h~~~~vl~~~~~svlivvnn~pw~ygmgliqrlYqpyFa~viFC  238 (390)
T PF03385_consen  159 AEQKLNYFGDLVDWCNETGYSNLSKYFPSPEQLAEQHDESYVLQKNLNSVLIVVNNYPWKYGMGLIQRLYQPYFAMVIFC  238 (390)
T ss_pred             HHHHHHhhchHHHHHhccCCccccccCCCHHHHHHHhhcceeecccCceeEEEecCCchhhhHHHHHHHhcccccEEEec
Confidence            9999999999999999999                            899999999999999999999999999999999


Q ss_pred             cC--------CCCCCce-----------eeecccchhhhhhHHHHh-hcCCCceEEEeecceeeecccccccCc
Q 007238          542 SE--------QKNEDLA-----------VEAGQLEQVYRHLPKIFS-RYTSAEGFLFLQDDTILNYWNLLQADK  595 (611)
Q Consensus       542 g~--------~~n~~~~-----------ve~~~g~~~Y~~L~k~~~-~~~~~~GYl~~~DD~ifN~Wn~~~~dk  595 (611)
                      |+        .+|.|+.           +|+.+|+|+|||+.++.| +++|++|||+|+||+|||+||++++++
T Consensus       239 G~~yp~~~~~~dn~t~~~~pinyih~~~~e~~~g~~~y~c~~~v~em~~~nv~gy~~~~dd~ifn~w~~id~s~  312 (390)
T PF03385_consen  239 GSWYPDQFSDQDNYTSTIHPINYIHMNPAEIHRGYFAYHCLTLVKEMGLQNVEGYFLMADDAIFNIWQRIDYSR  312 (390)
T ss_pred             CCcCchhhcCCccCccccCCcceeecCHHHHhcchhhHHHHHHHHHhcCCCcceEEEecchhHhhhhhhcchhh
Confidence            95        4566542           688999999999777776 999999999999999999999999997



>PLN03180 reversibly glycosylated polypeptide; Provisional Back     alignment and domain information
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query611
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.0 bits (108), Expect = 4e-05
 Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 73/227 (32%)

Query: 378 YDKIEAYPFSEEKDLHVNVGRLIKFLVSWRSNK-HRFFEKVLELSHSMAEEGFWTERDVK 436
            D I     +    L     RL   L+S +     +F E+VL +++              
Sbjct: 51  IDHIIMSKDAVSGTL-----RLFWTLLSKQEEMVQKFVEEVLRINYK------------- 92

Query: 437 FTAAWLQDLIAVGYQQPRLMSLELDRPRASIGHGDRKEFVPRKLPSVHLGVEETGTVSYE 496
               +L   I    +QP +M+      R  + + D + F    +  +     +      E
Sbjct: 93  ----FLMSPIKTEQRQPSMMTRMYIEQRDRL-YNDNQVFAKYNVSRLQP-YLKLRQALLE 146

Query: 497 IGNLIRWRKNFGNVVLI-MFCSGPVERTALEWRLLYGRIFKTVIILSEQKNEDLAVEAGQ 555
           +       +   NV++  +  SG                 KT           +A++   
Sbjct: 147 L-------RPAKNVLIDGVLGSG-----------------KTW----------VALDVCL 172

Query: 556 LEQVYRHLP-KIF----SRYTSAEGFLFLQDDTILNYWNLL-QADKN 596
             +V   +  KIF        S E         +     LL Q D N
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPE-------TVLEMLQKLLYQIDPN 212


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00