Citrus Sinensis ID: 007300
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 609 | 2.2.26 [Sep-21-2011] | |||||||
| Q43784 | 608 | Granule-bound starch synt | N/A | no | 0.986 | 0.988 | 0.724 | 0.0 | |
| O82627 | 608 | Granule-bound starch synt | N/A | no | 0.990 | 0.991 | 0.719 | 0.0 | |
| Q00775 | 607 | Granule-bound starch synt | N/A | no | 0.990 | 0.993 | 0.716 | 0.0 | |
| Q42857 | 608 | Granule-bound starch synt | N/A | no | 0.988 | 0.990 | 0.713 | 0.0 | |
| Q9MAQ0 | 610 | Probable granule-bound st | yes | no | 0.993 | 0.991 | 0.688 | 0.0 | |
| Q43092 | 603 | Granule-bound starch synt | N/A | no | 0.916 | 0.925 | 0.724 | 0.0 | |
| Q8LL05 | 565 | Granule-bound starch synt | N/A | no | 0.906 | 0.976 | 0.704 | 0.0 | |
| P09842 | 603 | Granule-bound starch synt | N/A | no | 0.947 | 0.956 | 0.659 | 0.0 | |
| P0C585 | 606 | Granule-bound starch synt | no | no | 0.919 | 0.924 | 0.680 | 0.0 | |
| Q0DEV5 | 609 | Granule-bound starch synt | no | no | 0.924 | 0.924 | 0.676 | 0.0 |
| >sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/616 (72%), Positives = 512/616 (83%), Gaps = 15/616 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMA 55
MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT
Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ- 57
Query: 56 SKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA 115
SK A NG P+ I+CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+A
Sbjct: 58 SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMA 112
Query: 116 ANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 175
A GHRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K
Sbjct: 113 ARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEK 172
Query: 176 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVAN 233
VWGKT SKIYGPR G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPY +V F+AN
Sbjct: 173 VWGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIAN 232
Query: 234 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 293
DWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 233 DWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFI 292
Query: 294 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 353
DGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+N
Sbjct: 293 DGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIIN 352
Query: 354 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 413
GMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQK
Sbjct: 353 GMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQK 412
Query: 414 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 473
GSDI AAI ++ NVQI++LGTGKK EKQ+E LE+LYP+KARGVAKFN+PLAHMI A
Sbjct: 413 GSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITA 472
Query: 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 533
GADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +D
Sbjct: 473 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKID 532
Query: 534 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGI 593
DVAA+ TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG
Sbjct: 533 SADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGT 592
Query: 594 DGEEIAPLAKENVATP 609
+GEEIAPLAKENV TP
Sbjct: 593 EGEEIAPLAKENVPTP 608
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Responsible for the synthesis of amylose in reserve starch. Manihot esculenta (taxid: 3983) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 2 |
| >sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/614 (71%), Positives = 508/614 (82%), Gaps = 11/614 (1%)
Query: 1 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASK 57
MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A +
Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQ 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
+ + NG P I+CG G+N++FV EV PWSKTGGLGDV+GGLPPA+A N
Sbjct: 60 SRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGN 114
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVW
Sbjct: 115 GHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKVW 174
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDW 235
GKT+SKIYGP G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPY DVVFVANDW
Sbjct: 175 GKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVANDW 234
Query: 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 295
HT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF DG
Sbjct: 235 HTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDG 294
Query: 296 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355
Y KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGM
Sbjct: 295 YEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGM 354
Query: 356 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 415
D QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGS
Sbjct: 355 DTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGS 414
Query: 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475
DIL AAI F+ +VQII+LGTGKK E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGA
Sbjct: 415 DILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGA 474
Query: 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 535
DF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP
Sbjct: 475 DFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPA 534
Query: 536 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 595
DV ++TTV RALA YG+ A EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DG
Sbjct: 535 DVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDG 594
Query: 596 EEIAPLAKENVATP 609
EEIAPLAKENVATP
Sbjct: 595 EEIAPLAKENVATP 608
|
Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/613 (71%), Positives = 509/613 (83%), Gaps = 10/613 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T
Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK-- 55
Query: 59 ATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG 118
T + A R + + G S IVCG G+N++FVGTEV PWSKTGGLGDVLGGLPPALAA G
Sbjct: 56 VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARG 114
Query: 119 HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178
HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVWG
Sbjct: 115 HRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKVWG 174
Query: 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDWH 236
KT SKIYGP+ G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPY DV+F+ANDWH
Sbjct: 175 KTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDWH 234
Query: 237 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 296
T+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY
Sbjct: 235 TALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGY 294
Query: 297 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 356
KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGMD
Sbjct: 295 EKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMD 354
Query: 357 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 416
QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSD
Sbjct: 355 TQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSD 414
Query: 417 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476
IL AAI FI +VQI+VLGTGKK E+++EQLE+LYP KA+GVAKFN+PLAHMI AGAD
Sbjct: 415 ILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGAD 474
Query: 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 536
F+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP D
Sbjct: 475 FMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPAD 534
Query: 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE 596
V + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE LL L +GSEPG++GE
Sbjct: 535 VLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGE 594
Query: 597 EIAPLAKENVATP 609
EIAPLAKENVATP
Sbjct: 595 EIAPLAKENVATP 607
|
Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2 | Back alignment and function description |
|---|
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/615 (71%), Positives = 502/615 (81%), Gaps = 13/615 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K
Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK- 58
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
+NG ++ G + IVC G+N++FVG EV PW KTGGLGDVLGGLPPALAA
Sbjct: 59 -----PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAA 113
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL KV
Sbjct: 114 RGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKV 173
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVAND 234
WGKT S +YGP+ G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPY DVVFVAND
Sbjct: 174 WGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVAND 233
Query: 235 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 294
WHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFID
Sbjct: 234 WHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFID 293
Query: 295 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354
GY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI NG
Sbjct: 294 GYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNG 353
Query: 355 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 414
MD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKG
Sbjct: 354 MDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKG 413
Query: 415 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474
SDIL AAI FI +VQI++LGTGKK E+Q+EQLE++YP+KARGVAKFN+PLAHMI AG
Sbjct: 414 SDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAG 473
Query: 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534
ADF+LIPSRFEPCGLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP
Sbjct: 474 ADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDP 533
Query: 535 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 594
DV V TTV RALA YGT A EM+KN M+Q+LSWKGPAK WE LL+L VAGSEPG++
Sbjct: 534 EDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVE 593
Query: 595 GEEIAPLAKENVATP 609
G+EIAPLAKENVATP
Sbjct: 594 GDEIAPLAKENVATP 608
|
Required for the synthesis of amylose. Ipomoea batatas (taxid: 4120) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/614 (68%), Positives = 500/614 (81%), Gaps = 9/614 (1%)
Query: 1 MATAVAASSFVSRSY---GHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ H +S + +K + + H GLRS N++D+LQ ++ A
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
++ + ++ IVC G++++F+G EV PWSKTGGLGDVLGGLPPALAA
Sbjct: 61 VSAKSSKRSSKVKTAG----KIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDW 235
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPY DVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 295
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 296 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 356 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 415
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 535
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 536 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 595
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +G
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEG 596
Query: 596 EEIAPLAKENVATP 609
EEIAPLAKENVATP
Sbjct: 597 EEIAPLAKENVATP 610
|
Required for the synthesis of amylose in endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/573 (72%), Positives = 479/573 (83%), Gaps = 15/573 (2%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
GLRSLN L V+T + +S + ++ + IVCG+ L +FVG EV PWS
Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPP LA NGHRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 218
KRGVDRVFVDHP FL +VWGKT SK+YGP+TG DY+DNQLRFSLLCQAALEAPR+LNLNS
Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLNS 210
Query: 219 NKYFSGPY--DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED 276
+KYFSGPY DV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF D
Sbjct: 211 SKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSD 270
Query: 277 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 336
F LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+G
Sbjct: 271 FSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRG 330
Query: 337 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 396
VELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLPV
Sbjct: 331 VELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPV 390
Query: 397 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEK 456
D +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK MEKQ+E LE YP K
Sbjct: 391 DSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGK 450
Query: 457 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 516
A G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+EG
Sbjct: 451 AIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEG 510
Query: 517 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKK 576
+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK
Sbjct: 511 YTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKL 570
Query: 577 WEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609
WE+ LLNLEV G+ GIDG+EIAPLAKENVATP
Sbjct: 571 WEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
|
May be responsible for the synthesis of amylose. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
|---|
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/559 (70%), Positives = 457/559 (81%), Gaps = 7/559 (1%)
Query: 54 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+A + AT+ + RN R+ S IVC G+ I+FV TEV PW KTGGLGDV+GGLPPA
Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPA 66
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
LAA GHRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL
Sbjct: 67 LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFL 126
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFV 231
KVWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPY +VVFV
Sbjct: 127 EKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFV 186
Query: 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 291
ANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SFD
Sbjct: 187 ANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFD 246
Query: 292 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-G 350
F+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++ G
Sbjct: 247 FVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETG 306
Query: 351 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 410
IVNGMDV +WNP TDKYI VKY+A+TV A+ L KE LQAEVGL VD +IPVI FIGRLE
Sbjct: 307 IVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLE 366
Query: 411 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470
EQKGSDIL AA P F++ENVQIIVLGTGKK ME++L LE+ YP+ ARG+AKFN+PLAHM
Sbjct: 367 EQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHM 426
Query: 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 530
+ AGADFI+IPSRFEPCGLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+ E
Sbjct: 427 MFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFE 486
Query: 531 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 590
VDP DVAAV + V RAL Y T M++N MAQDLSWKGPAKKWEE LL+L V GS+
Sbjct: 487 TVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQ 546
Query: 591 PGIDGEEIAPLAKENVATP 609
PGI+GEEIAPLAK+NVATP
Sbjct: 547 PGIEGEEIAPLAKQNVATP 565
|
Involved in the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/585 (65%), Positives = 460/585 (78%), Gaps = 8/585 (1%)
Query: 31 KFRCMKHSGLRSLNIIDD-LQVKTMASKLA--TSRQAGRNGFRSQNGPSLMIVCGVGLNI 87
+FR GLR N D L ++T+ + A SR+A R R + ++ G G+N+
Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNL 78
Query: 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147
+FVG E+APWSKTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT V+ E+KV D
Sbjct: 79 VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVAD 138
Query: 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAA 207
+ E+VRFFHC+KRGVDRVF+DHPWFL KV GKT+ KIYGP G DY+DNQ RFSLLCQAA
Sbjct: 139 EYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAA 198
Query: 208 LEAPRILNLNSNKYFSGPY--DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHN 265
LEAPRILNLN+N YFSGPY DVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIHN
Sbjct: 199 LEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHN 258
Query: 266 IAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325
I+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+Y
Sbjct: 259 ISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYY 318
Query: 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385
A+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L K
Sbjct: 319 AEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNK 378
Query: 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEK 444
EALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK EK
Sbjct: 379 EALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEK 438
Query: 445 QLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 504
L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT + A
Sbjct: 439 LLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCA 498
Query: 505 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 564
STGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M
Sbjct: 499 STGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCM 558
Query: 565 AQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609
QDLSWKGPAK WE+ LL L V GSEPGI GEEIAPLA ENVA P
Sbjct: 559 IQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAMENVAAP 603
|
Required for the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P0C585|SSG1_ORYSA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/566 (68%), Positives = 447/566 (78%), Gaps = 6/566 (1%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DASSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQ EAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQ---EAPRILNLNNNPYFKGT 220
Query: 226 Y--DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 283
Y DVVFV NDWHT +P YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 221 YGEDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLS 280
Query: 284 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII 343
+FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG +G ELDNI+
Sbjct: 281 ERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIM 340
Query: 344 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403
R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR +P+I
Sbjct: 341 RLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLI 400
Query: 404 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463
FIGRLEEQKG D++AAAIP ++ENVQI++LGTGKK EK L+ +E YP K R V KF
Sbjct: 401 AFIGRLEEQKGPDVMAAAIPELMQENVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKF 460
Query: 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 523
N PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 461 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMG 520
Query: 524 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583
SVDC+ V+P DV V+TT++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 521 RLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLG 580
Query: 584 LEVAGSEPGIDGEEIAPLAKENVATP 609
L VAGSEPG++GEEIAPLAKENVA P
Sbjct: 581 LGVAGSEPGVEGEEIAPLAKENVAAP 606
|
Required for the synthesis of amylose in endosperm. Oryza sativa (taxid: 4530) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q0DEV5|SSG1_ORYSJ Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/566 (67%), Positives = 447/566 (78%), Gaps = 3/566 (0%)
Query: 47 DDLQVKTMASKLATSRQAGRNGFRSQNGPSLMI-VCGVGLNILFVGTEVAPWSKTGGLGD 105
D + S AT +Q S+ PS+++ G G+N++FVG E+APWSKTGGLGD
Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGD 103
Query: 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165
VLGGLPPA+AANGHRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRV
Sbjct: 104 VLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRV 163
Query: 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGP 225
F+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G
Sbjct: 164 FIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGT 223
Query: 226 Y--DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 283
Y DVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL
Sbjct: 224 YGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLS 283
Query: 284 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII 343
+F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+
Sbjct: 284 ERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIM 343
Query: 344 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403
R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I
Sbjct: 344 RLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLI 403
Query: 404 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463
FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KF
Sbjct: 404 AFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKF 463
Query: 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 523
N PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 464 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMG 523
Query: 524 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583
SVDC+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL
Sbjct: 524 RLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLG 583
Query: 584 LEVAGSEPGIDGEEIAPLAKENVATP 609
L VAGS PGI+G+EIAPLAKENVA P
Sbjct: 584 LGVAGSAPGIEGDEIAPLAKENVAAP 609
|
Required for the synthesis of amylose in endosperm. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 609 | ||||||
| 375151860 | 611 | GBSSII-2 [Citrus sinensis] | 1.0 | 0.996 | 0.995 | 0.0 | |
| 375151864 | 618 | GBSSII-2 [Prunus persica] | 0.947 | 0.933 | 0.794 | 0.0 | |
| 182636946 | 615 | granule bound starch synthase Ib precurs | 0.973 | 0.964 | 0.775 | 0.0 | |
| 223029784 | 615 | granule-bound starch synthase [Nelumbo n | 0.995 | 0.985 | 0.757 | 0.0 | |
| 225466653 | 614 | PREDICTED: granule-bound starch synthase | 0.993 | 0.985 | 0.755 | 0.0 | |
| 197725528 | 615 | granule-bound starch synthase [Nelumbo n | 0.996 | 0.986 | 0.758 | 0.0 | |
| 170676395 | 614 | granule bound starch synthase Ib precurs | 0.967 | 0.959 | 0.763 | 0.0 | |
| 258489621 | 609 | granule-bound starch synthase 1 [Gossypi | 0.990 | 0.990 | 0.738 | 0.0 | |
| 211906484 | 609 | granule bound starch synthase [Gossypium | 0.990 | 0.990 | 0.734 | 0.0 | |
| 211906516 | 609 | granule bound starch synthase [Gossypium | 0.990 | 0.990 | 0.736 | 0.0 |
| >gi|375151860|gb|AFA36446.1| GBSSII-2 [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1232 bits (3188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/611 (99%), Positives = 609/611 (99%), Gaps = 2/611 (0%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT 60
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIID+LQVKTMASKLAT
Sbjct: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDELQVKTMASKLAT 60
Query: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
Sbjct: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
Query: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
Sbjct: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
Query: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDWHTS 238
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY DVVFVANDWHTS
Sbjct: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240
Query: 239 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 298
LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK
Sbjct: 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
Query: 299 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 358
PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ
Sbjct: 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360
Query: 359 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 418
EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL
Sbjct: 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 420
Query: 419 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478
AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI
Sbjct: 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480
Query: 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538
LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA
Sbjct: 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540
Query: 539 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 598
AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI
Sbjct: 541 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 600
Query: 599 APLAKENVATP 609
APLAKENVATP
Sbjct: 601 APLAKENVATP 611
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151864|gb|AFA36448.1| GBSSII-2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/580 (79%), Positives = 517/580 (89%), Gaps = 3/580 (0%)
Query: 33 RCMKHSGLRSLNIIDDLQVKTMASKLA-TSRQAGRNGFRSQNGPSLMIVCGVGLNILFVG 91
+ M H+GLR+LN +D+L+VK M + +A +R N R+ + P+ IVCG G+N++F+G
Sbjct: 39 QAMTHNGLRALNTVDELRVKIMGNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLG 98
Query: 92 TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151
TEV PWSKTGGLGDVLGGLPPA+AANGHRVMT++PRYDQYKDAWDT+V IE+KVG+K EK
Sbjct: 99 TEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEK 158
Query: 152 VRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP 211
VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP GED++DNQLRFSLLC+AALEAP
Sbjct: 159 VRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEAP 218
Query: 212 RILNLNSNKYFSGPY--DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 269
R+LNLNS+KYFSGPY +VVF+ANDWHT+L+PCYLK +Y+PKG+Y+SAKV FCIHNIAYQ
Sbjct: 219 RVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAYQ 278
Query: 270 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL 329
GRFA DF LLNLP +FKSSFDFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL
Sbjct: 279 GRFASADFALLNLPDEFKSSFDFIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEEL 338
Query: 330 VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389
VS +KGVELDN+IRK GI GIVNGMDVQEWNPLTDKY KYDASTV DAKPLLKEALQ
Sbjct: 339 VSTVEKGVELDNVIRKAGILGIVNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEALQ 398
Query: 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQL 449
AEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIKENVQIIVLGTGKKPMEKQLEQL
Sbjct: 399 AEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQL 458
Query: 450 EILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 509
EI YP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGL
Sbjct: 459 EIKYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 518
Query: 510 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLS 569
VDTV+EGFTGFQMG F+V+CE VDP DV A++TTV RAL TYGT A E++ N MAQDLS
Sbjct: 519 VDTVKEGFTGFQMGGFNVECEVVDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDLS 578
Query: 570 WKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609
WKGPAKKWEE LLNL V SEPGIDGEEIAPLAKEN+ATP
Sbjct: 579 WKGPAKKWEEVLLNLGVVDSEPGIDGEEIAPLAKENIATP 618
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|182636946|gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica] gi|357528262|gb|AET80370.1| granule-bound starch synthase GBSS2 [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/602 (77%), Positives = 527/602 (87%), Gaps = 9/602 (1%)
Query: 14 SYGHEVASGLNSKA--SQMKF--RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGF 69
SYG V+SG + K +M F + + H+GLR+LN +D+L+V+ MA+ +A RQ
Sbjct: 17 SYG-AVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIMANSVA--RQTRGKTV 73
Query: 70 RSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129
S S +IVCG G+N++F+GTEV PWSKTGGLGDVLGGLPPA+AANGHRVMTI+PRYD
Sbjct: 74 NSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD 133
Query: 130 QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRT 189
QYKDAWDT+V +ELKVGDK E VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP
Sbjct: 134 QYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPVA 193
Query: 190 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDWHTSLIPCYLKTM 247
G D++DNQLRFSLLCQAAL APR+LNLNS+KYFSGPY +VVF+ANDWHT+L+PCYLK +
Sbjct: 194 GVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAI 253
Query: 248 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW 307
YKPKG+YK+AKV FCIHNIAYQGRFAF DF LLNLP +FKSSFDFIDGYNKPV+GRKINW
Sbjct: 254 YKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFIDGYNKPVKGRKINW 313
Query: 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 367
MKAGILESD VLTVSP+YA+ELVS +KGVELDNI+RK+ I+GIVNGMDVQEWNP+TDKY
Sbjct: 314 MKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDKY 373
Query: 368 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 427
VKYDASTV DAKPLLKEALQAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIK
Sbjct: 374 TTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIK 433
Query: 428 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 487
ENVQIIVLGTGKKPMEKQLEQLE YP+KARG+AKFN+PLAHMI AGADF+L+PSRFEPC
Sbjct: 434 ENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRFEPC 493
Query: 488 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547
GLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGF MG+F+V+CE VDPVDV A++TTV RA
Sbjct: 494 GLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTRA 553
Query: 548 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVA 607
L +YGT A E++ N MAQDLSWKGPAKKWEE LL+L VA SE GI+GEEIAPLAKENVA
Sbjct: 554 LGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVLLSLGVANSELGIEGEEIAPLAKENVA 613
Query: 608 TP 609
TP
Sbjct: 614 TP 615
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223029784|gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/618 (75%), Positives = 530/618 (85%), Gaps = 12/618 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIV-CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
A T+ QA +++N ++ CG G+N++FVG EV PWSKTGGLGDVLGGLPPA
Sbjct: 60 AK--TTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPA 117
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
+AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 118 MAANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFL 177
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFV 231
KVWGKT SKIYGP GEDY DNQLRFSLLCQAALEAPR+LNLNS+K+FSGPY DVVF+
Sbjct: 178 EKVWGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGEDVVFI 237
Query: 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 291
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFD
Sbjct: 238 CNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFD 297
Query: 292 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 351
FIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+ELVSG +KGVELDNIIRKTGI GI
Sbjct: 298 FIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITGI 357
Query: 352 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 411
VNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEE
Sbjct: 358 VNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEE 417
Query: 412 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 471
QKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMI
Sbjct: 418 QKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMI 477
Query: 472 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 531
IAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+A
Sbjct: 478 IAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDA 537
Query: 532 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 591
VDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEP
Sbjct: 538 VDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEP 597
Query: 592 GIDGEEIAPLAKENVATP 609
GIDGEEIAPLAKENVATP
Sbjct: 598 GIDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466653|ref|XP_002273608.1| PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Vitis vinifera] gi|296089007|emb|CBI38710.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/618 (75%), Positives = 532/618 (86%), Gaps = 13/618 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASG--LNSKASQMKFR----CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS+F+ RS + + KA+ K R + H+GLR+LN +D+L +T
Sbjct: 1 MAT-VTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTT 59
Query: 55 ASKLATSRQAGRNGFRSQN-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+ +R+ R GF+++N P I+CG G++++FVGTEV PWSKTGGLGDVLGGLPPA
Sbjct: 60 ---IKVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPA 116
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
++ANGHRVMT++PR+DQYKDAWDT V ++L VGD+ EKVRFFHC+KRGVDRVFVDHPWFL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFV 231
KVWGKT SK+YGP GED+QDNQLRFSLLCQAALEAPRILNL S+KYFSGPY DVVF+
Sbjct: 177 EKVWGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFI 236
Query: 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 291
ANDWHT+ + CYLKTMY+ KG Y +AKVVFCIHNIAYQGRFAF DF LLNLP +FKSSFD
Sbjct: 237 ANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSFD 296
Query: 292 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 351
F DGY KPV+GRKINWMKAGILE+D VLTVSP+YA+ELVSG +KGVELDNI+R+TGI GI
Sbjct: 297 FTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGI 356
Query: 352 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 411
+NGMDVQEWNPLTDKYI +KYDASTV +AK LLKEALQAE GLPVDRNIPVIGFIGRLEE
Sbjct: 357 INGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLEE 416
Query: 412 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 471
QKGSDIL AAIP F+ NVQIIVLGTGKKPMEKQLEQLE YP+ ARGVAKFN+PLAHMI
Sbjct: 417 QKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHMI 476
Query: 472 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 531
IAGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMGSFSV+C+A
Sbjct: 477 IAGADFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECDA 536
Query: 532 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEP 591
VDP D AV+T+V+RALATYGT AL EM++N MAQDLSWKGPAKKWEE LL+L V GSEP
Sbjct: 537 VDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVLLSLGVPGSEP 596
Query: 592 GIDGEEIAPLAKENVATP 609
GIDGEEIAPL+KENVATP
Sbjct: 597 GIDGEEIAPLSKENVATP 614
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197725528|gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/617 (75%), Positives = 526/617 (85%), Gaps = 10/617 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL 114
A K T R G+ +I CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+
Sbjct: 60 A-KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAM 118
Query: 115 AANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174
AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 119 AANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLE 178
Query: 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVA 232
KVWGKT SKIYGP +GEDY DNQLRFSLLCQAALEAPR+LNLNS+K FSGPY DVVF+
Sbjct: 179 KVWGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGEDVVFIC 238
Query: 233 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 292
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFDF
Sbjct: 239 NDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFDF 298
Query: 293 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 352
IDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL SG +KGVELDNIIRKTGI GIV
Sbjct: 299 IDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGIV 358
Query: 353 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 412
NG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEEQ
Sbjct: 359 NGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEEQ 418
Query: 413 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472
KGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMII
Sbjct: 419 KGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMII 478
Query: 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 532
AGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+AV
Sbjct: 479 AGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDAV 538
Query: 533 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 592
DP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWKGPAKKWE LL+LEVAGSEPG
Sbjct: 539 DPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEPG 598
Query: 593 IDGEEIAPLAKENVATP 609
IDGEEIAPLAKENVATP
Sbjct: 599 IDGEEIAPLAKENVATP 615
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170676395|gb|ACB30385.1| granule bound starch synthase Ib precursor [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/600 (76%), Positives = 517/600 (86%), Gaps = 11/600 (1%)
Query: 17 HEVASGLNSKASQMKFRCMK----HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQ 72
H SKA+ R ++ H+GLR LN++D+L +T A QA R G + +
Sbjct: 19 HRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAV--QARRKGLQGK 76
Query: 73 N-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131
N P+ +I+CG +N++F+GTEV PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY
Sbjct: 77 NVRPTGVIICG--MNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 134
Query: 132 KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGE 191
KDAWDT V IE+KVGDK EKV FFHCHKRGVDRVFVDHP FL KVWGK+ +K+YGP GE
Sbjct: 135 KDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGE 194
Query: 192 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDWHTSLIPCYLKTMYK 249
DYQDNQLRFSL CQAALEAPR+LNL SNKYFSGPY DV+F+ANDWHT+LIPCYLK+MY+
Sbjct: 195 DYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQ 254
Query: 250 PKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMK 309
G+YK+A+VV+CIHNIAYQGRFAF DF LLNLP QFKSSFDF+DG+ KPV GRK NWMK
Sbjct: 255 SIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMK 314
Query: 310 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIG 369
AGILESD+VLTVSP+YA+ELVSG DKGVELDNIIR+TGI GIVNGMDVQEWNP TDKY+
Sbjct: 315 AGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLT 374
Query: 370 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
VKY+ASTV++ K LLKEALQAEVGLPVDRNIP+IGFIGRLEEQKGSDIL AAIP FIKEN
Sbjct: 375 VKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKEN 434
Query: 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 489
+QI+ LGTGKK MEKQLEQLEI YP+KARGVAKFN+PLAHMIIAGADFILIPSRFEPCGL
Sbjct: 435 IQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGL 494
Query: 490 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549
IQL AMRYGTVPIVASTGGLVDTV+EGFTGFQMGSF+V+CEAVDP DV A++ TV+RALA
Sbjct: 495 IQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALA 554
Query: 550 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609
+GT A E++KN MAQDLSWKGPAK+WEE LL+L V GSE GI+GEEIAP AKEN+ATP
Sbjct: 555 VHGTLAFTEIIKNCMAQDLSWKGPAKRWEEVLLSLGVPGSEAGIEGEEIAPQAKENLATP 614
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258489621|gb|ACV72639.1| granule-bound starch synthase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/615 (73%), Positives = 522/615 (84%), Gaps = 12/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVAND 234
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPY DVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 235 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 294
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 295 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 355 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 414
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 415 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 535 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 594
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 595 GEEIAPLAKENVATP 609
GEE+APLAKENVATP
Sbjct: 595 GEEVAPLAKENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906484|gb|ACJ11735.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/615 (73%), Positives = 520/615 (84%), Gaps = 12/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS S H + G ++KA+ + + M H+GLRSLN +D L+++T +
Sbjct: 1 MAT-LTTSHFVSTS-SHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLRMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + +R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADYR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVAND 234
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPY DVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 235 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 294
WH++L+PCYLK+MY+ +G+Y SAKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMSAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 295 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354
GYNKPV GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVMGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 355 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 414
MDVQEWNP +DKYI VKYDA+T+M AKPLLKEA+Q EVGLP DR++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTIMKAKPLLKEAIQGEVGLPCDRDVPLIGFIGRLEEQKG 414
Query: 415 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474
SDILA AIP EN QI+VLGTGKK ME Q+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLAAENCQIVVLGTGKKAMENQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 535 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 594
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 595 GEEIAPLAKENVATP 609
GEEIAPLA+ENVATP
Sbjct: 595 GEEIAPLARENVATP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906516|gb|ACJ11751.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/615 (73%), Positives = 521/615 (84%), Gaps = 12/615 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVAND 234
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPY DVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 235 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 294
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 295 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 355 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 414
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 415 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 535 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 594
DV V TV+RALATYGTQAL EM++N MAQD SWKGP++ WE+ LL+L VAGSEPGI+
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKMLLSLGVAGSEPGIE 594
Query: 595 GEEIAPLAKENVATP 609
GEE+APLAKENVA P
Sbjct: 595 GEEVAPLAKENVAPP 609
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 609 | ||||||
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.993 | 0.991 | 0.667 | 2.6e-221 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.917 | 0.917 | 0.647 | 3.8e-197 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.784 | 0.603 | 0.401 | 5.3e-88 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.789 | 0.737 | 0.382 | 8.2e-83 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.602 | 0.771 | 0.371 | 5.4e-59 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.596 | 0.724 | 0.361 | 7.8e-55 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.591 | 0.743 | 0.362 | 4.3e-54 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.596 | 0.75 | 0.342 | 5.6e-52 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.596 | 0.75 | 0.342 | 5.6e-52 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.561 | 0.716 | 0.340 | 3.3e-47 |
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2137 (757.3 bits), Expect = 2.6e-221, P = 2.6e-221
Identities = 410/614 (66%), Positives = 488/614 (79%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY--DVVFVANDW 235
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPY DVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 295
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 296 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 356 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 415
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 535
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 536 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 595
DV A + V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +G
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEG 596
Query: 596 EEIAPLAKENVATP 609
EEIAPLAKENVATP
Sbjct: 597 EEIAPLAKENVATP 610
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 1909 (677.1 bits), Expect = 3.8e-197, P = 3.8e-197
Identities = 365/564 (64%), Positives = 431/564 (76%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY- 226
DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G Y
Sbjct: 166 DHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 225
Query: 227 -DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 285
DVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +
Sbjct: 226 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSER 285
Query: 286 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 345
F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 286 FRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRL 345
Query: 346 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I F
Sbjct: 346 TGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAF 405
Query: 406 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 465
IGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN
Sbjct: 406 IGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 465
Query: 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 525
PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 466 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRL 525
Query: 526 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585
SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWKGPAK WE LL L
Sbjct: 526 SVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 585
Query: 586 VAGSEPGIDGEEIAPLAKENVATP 609
VAGS PGI+G+EIAPLAKENVA P
Sbjct: 586 VAGSAPGIEGDEIAPLAKENVAAP 609
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 203/506 (40%), Positives = 281/506 (55%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V +FH GVD VF+D P F + IYG G D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR-----HLSNNIYG---GNRL-DILKRMVLFC 411
Query: 205 QAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 264
+AA+E P + Y G ++ F+ANDWHT+L+P YLK Y+ G+ K + V IH
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG--NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIH 469
Query: 265 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324
NIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTVS
Sbjct: 470 NIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVSHG 525
Query: 325 YAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVM 378
Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y +
Sbjct: 526 YSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLH 584
Query: 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 438
KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++LGTG
Sbjct: 585 IGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTG 644
Query: 439 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 498
+ +E+ L Q+E Y +KARG F++ AH I AGAD +L+PSRFEPCGL QL+AM YG
Sbjct: 645 RPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYG 704
Query: 499 TVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QAL 556
T+P+V + GGL DTV++ F + D + + + L TY ++
Sbjct: 705 TIPVVHAVGGLRDTVQQ-FDPYSETGLGW---TFDSAEAGKLIHALGNCLLTYREYKESW 760
Query: 557 AEMMKNGMAQDLSWKGPAKKWEETLL 582
+ + GM QDLSW A+K+EE L+
Sbjct: 761 EGLQRRGMTQDLSWDNAAEKYEEVLV 786
|
|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 195/510 (38%), Positives = 288/510 (56%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
+ + + ++V F+H ++ GVD VFVDH K + + + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 258
RF+LLC AA EAP +L L Y G + F+ NDWH L+P L Y+P G+YK A+
Sbjct: 256 RFTLLCHAACEAPLVLPLGGFTY--GEKSL-FLVNDWHAGLVPILLAAKYRPYGVYKDAR 312
Query: 259 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAGILE 314
+ IHN+A+QG + L LP+++ + ++ + + G +N +K I+
Sbjct: 313 SILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVT 372
Query: 315 SDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKY 372
SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I Y
Sbjct: 373 SDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHY 431
Query: 373 DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI 432
A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++Q
Sbjct: 432 SADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQF 490
Query: 433 IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 492
++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL QL
Sbjct: 491 VMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQL 550
Query: 493 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAAVSTTVRRALATY 551
+AMRYGT+P+V TGGL DTVE F + G V P+ ++ + +R A ATY
Sbjct: 551 YAMRYGTIPVVHGTGGLRDTVEN-FNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATY 609
Query: 552 GT--QALAEMMKNGMAQDLSWKGPAKKWEE 579
Q+ +M+ GM ++ SW+ A ++E+
Sbjct: 610 REYKQSWEGLMRRGMTRNYSWENAAVQYEQ 639
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| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 568 (205.0 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 148/398 (37%), Positives = 221/398 (55%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKG 252
Y D + RFS +A LE I +L+ F DV+ ++DWHT+++ L+ Y+
Sbjct: 102 YDDGE-RFSYFSKAVLEC--IPHLD----FE--VDVLH-SHDWHTAMVNFLLREKYQDNP 151
Query: 253 MYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 311
+Y+ K V+ IHN+ +QG F E + LL L ++ S + ++ Y +N+MK G
Sbjct: 152 LYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYFHS-EQLEFYGN------VNFMKGG 204
Query: 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG 369
I+ SD + VSP Y +E + E G +LD ++RK K GIVNG+D +NP TD YI
Sbjct: 205 IIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPETDSYIT 263
Query: 370 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
+YDA ++ + K K ALQ GLP + P+I + RL +QKG D++ ++E+
Sbjct: 264 AQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIMEED 322
Query: 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 489
VQ I+LG+G E+ E + YPEK + FN LAH + AG+D L+PS FEPCGL
Sbjct: 323 VQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGL 382
Query: 490 IQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547
QL A+ YGT+PIV TGGL DTV+ + TG G + A D + TV RA
Sbjct: 383 GQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVLRA 436
Query: 548 LATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 584
+ Y +++ E ++K M +D SW+ A +++ +L
Sbjct: 437 IEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSL 474
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| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 142/393 (36%), Positives = 215/393 (54%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKG 252
Y DN RF L +AA+E P+++ P DV F A+DWHT+ +P +L T+Y+
Sbjct: 112 YMDNDNRFIFLSRAAMELPKLIGF-------AP-DV-FHAHDWHTAAVPVFLNTLYRDDP 162
Query: 253 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 312
+ A V +HN+ +QG F +L + + F F+ G K + N +K G+
Sbjct: 163 LVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH---FTFL-GLEKD---NQTNLLKGGL 215
Query: 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGV 370
+ ++ TVS YA+E+ + E G LD ++R + GI+NG+D +EWNP TD +I
Sbjct: 216 YHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHIVA 274
Query: 371 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 430
Y S + K L K +Q GLP ++P+ G +GRL +QKG DILA AI + +V
Sbjct: 275 NYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLVGRLVKQKGIDILAEAIHRILALDV 333
Query: 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLI 490
Q+++LG G+ + YPEK +N L+H I AG+DF ++PS FEPCGL
Sbjct: 334 QVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNGLSHRIEAGSDFFVMPSAFEPCGLN 393
Query: 491 QLHAMRYGTVPIVASTGGLVDTVE----EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546
Q++++RYGT+PIV +TGGL D+VE + TG +S D +A+ V T RR
Sbjct: 394 QMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADALFDTVGWTVHTWYRR 453
Query: 547 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 579
A+A ++ N MA+ +W+ A ++EE
Sbjct: 454 K------DAMAALIGNAMAKRFTWEDSAARYEE 480
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| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 147/406 (36%), Positives = 215/406 (52%)
Query: 192 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPK 251
DY DN RF+ C++ L+ + ++ P DV+ +DW T+LIP L+
Sbjct: 105 DYPDNPRRFAFFCRSVLQFLKRMDFR-------P-DVIH-CHDWQTALIPIILRLEAADD 155
Query: 252 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 311
+ VF IHN+AYQG F LP+ ++ ++++ Y + +N MK
Sbjct: 156 PFFARTATVFTIHNLAYQGLFPAPAIAETGLPSALFTT-EWLEYYGQ------LNLMKGA 208
Query: 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG 369
IL +D++ TVS Y +E+++ +G L+ ++ + G + GIVNG+D EWNP DK I
Sbjct: 209 ILTADLITTVSETYRREIMT-PTQGCGLEGVLARRGDDLFGIVNGIDTDEWNPAADKRIF 267
Query: 370 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
Y A + K K LQ E+G+P ++P+IG + RL EQKG D++ +P +
Sbjct: 268 RNYSARALA-GKAADKLELQRELGMPAAPSVPLIGMVSRLAEQKGIDLVLELLPRLAESE 326
Query: 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHMIIAGADFILIPSRFEP 486
+Q ++LGTG LE+L + A ++ FN PLA I AG+D L+PSRFEP
Sbjct: 327 LQFVLLGTGNACY---LERLNSFRSKGAANISINLGFNDPLAPKIYAGSDLFLMPSRFEP 383
Query: 487 CGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAA 539
CGL QL AMRYGTVP+V TGGL DTV EG TGF F+ D A
Sbjct: 384 CGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTAD----------A 432
Query: 540 VSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584
+ RALA Y ++ +M+ GM +D+SW A ++E TL +
Sbjct: 433 CWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNAAGRYE-TLYRM 477
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| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 134/391 (34%), Positives = 208/391 (53%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKG 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P-DIIH-ANDWHTGLVPFLLKTRYRYDS 156
Query: 253 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++AGI
Sbjct: 157 FFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRAGI 209
Query: 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVK 371
+D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 210 AFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPAT 269
Query: 372 Y--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++ N
Sbjct: 270 YSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNN 328
Query: 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 489
VQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE CGL
Sbjct: 329 VQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGL 388
Query: 490 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549
Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RAL
Sbjct: 389 NQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRALL 444
Query: 550 TYGTQALAEMMK---NGMAQDLSWKGPAKKW 577
Y Q EM+K M Q+ SW+ A+++
Sbjct: 445 FY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
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| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 134/391 (34%), Positives = 208/391 (53%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKG 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P-DIIH-ANDWHTGLVPFLLKTRYRYDS 156
Query: 253 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++AGI
Sbjct: 157 FFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRAGI 209
Query: 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVK 371
+D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 210 AFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPAT 269
Query: 372 Y--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++ N
Sbjct: 270 YSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNN 328
Query: 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 489
VQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE CGL
Sbjct: 329 VQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGL 388
Query: 490 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549
Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RAL
Sbjct: 389 NQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRALL 444
Query: 550 TYGTQALAEMMK---NGMAQDLSWKGPAKKW 577
Y Q EM+K M Q+ SW+ A+++
Sbjct: 445 FY-LQQPEEMLKVQQRAMQQNFSWEESAQEY 474
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| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 124/364 (34%), Positives = 192/364 (52%)
Query: 227 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 286
DVV A+DWH L P YL +P AK VF +HN+AYQG F + LP F
Sbjct: 131 DVVH-AHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF 183
Query: 287 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNII 343
F+ I G G+ I+++KAG+ +D + VSP YA+E+ + G+E L
Sbjct: 184 ---FN-IHGLE--FNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH 236
Query: 344 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403
R+ + G++NG+D + W+P TD + +Y T+ D K K LQ +GL VD +P+
Sbjct: 237 REGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLF 295
Query: 404 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463
+ RL QKG D++ A+P +++ Q+ +LG G +++ YP + +
Sbjct: 296 AVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY 355
Query: 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 523
+ +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + +
Sbjct: 356 HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--CSLENL 413
Query: 524 SFSVDCEAV-DPVDVAAVSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEETL 581
+ V V + + ++ +RRA + +L + + MA D SW+ AK + E
Sbjct: 414 ADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELY 473
Query: 582 LNLE 585
L+
Sbjct: 474 YRLK 477
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LL05 | SSG1B_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7048 | 0.9064 | 0.9769 | N/A | no |
| Q42857 | SSG1_IPOBA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7138 | 0.9885 | 0.9901 | N/A | no |
| P09842 | SSG1_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6598 | 0.9474 | 0.9568 | N/A | no |
| Q43784 | SSG1_MANES | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7240 | 0.9868 | 0.9884 | N/A | no |
| P04713 | SSG1_MAIZE | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6713 | 0.9326 | 0.9388 | N/A | no |
| O82627 | SSG1_ANTMA | 2, ., 4, ., 1, ., 2, 1 | 0.7198 | 0.9901 | 0.9917 | N/A | no |
| Q42968 | SSG1_ORYGL | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6749 | 0.9244 | 0.9244 | N/A | no |
| Q43092 | SSG1_PEA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7242 | 0.9162 | 0.9253 | N/A | no |
| A2Y8X2 | SSG1_ORYSI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6766 | 0.9244 | 0.9244 | N/A | no |
| Q00775 | SSG1_SOLTU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7161 | 0.9901 | 0.9934 | N/A | no |
| Q43134 | SSG1_SORBI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6838 | 0.9211 | 0.9226 | N/A | no |
| Q9MAQ0 | SSG1_ARATH | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6889 | 0.9934 | 0.9918 | yes | no |
| P27736 | SSG1_WHEAT | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6302 | 0.9507 | 0.9414 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.21 | 0.979 |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.242 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00011972001 | SubName- Full=Chromosome undetermined scaffold_2674, whole genome shotgun sequence; (614 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00028257001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (445 aa) | • | • | • | • | 0.527 | ||||
 | GSVIVG00029046001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (509 aa) | • | • | • | • | 0.499 | ||||
 | GSVIVG00007848001 | SubName- Full=Chromosome undetermined scaffold_1099, whole genome shotgun sequence; (319 aa) | • | 0.489 | |||||||
 | GSVIVG00014579001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (519 aa) | • | • | • | • | 0.469 | ||||
 | GSVIVG00019926001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (520 aa) | • | • | • | • | 0.449 | ||||
 | GSVIVG00036349001 | RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (527 aa) | • | • | • | 0.424 | |||||
 | GSVIVG00015571001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (755 aa) | • | • | 0.422 | ||||||
 | GSVIVG00025477001 | RecName- Full=Galactose-1-phosphate uridylyltransferase; EC=2.7.7.12; (332 aa) | • | 0.408 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 609 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-155 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-126 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 9e-95 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 1e-81 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 1e-75 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 2e-64 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 7e-59 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 5e-26 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 2e-14 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-14 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 6e-14 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 8e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 9e-12 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 2e-11 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 6e-10 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 2e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 7e-09 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 2e-08 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-08 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 8e-08 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-06 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 2e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 2e-04 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 8e-04 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 0.001 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 0.001 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 0.003 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.004 | |
| pfam14172 | 133 | pfam14172, DUF4309, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 204/507 (40%), Positives = 284/507 (56%), Gaps = 48/507 (9%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVI 141
+LFV +EVAP++KTGGLGDV+G LP ALA GH V I P+Y + D +
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLF 60
Query: 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFS 201
+ VG + E V F GV F+D+P + + +G DY+DN RF+
Sbjct: 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLY-------DDSGYDYEDNAERFA 113
Query: 202 LLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 261
L +AALE R L D++ +DWHT L+P LK Y +K+ K VF
Sbjct: 114 LFSRAALELLRRLG--------WKPDII-HCHDWHTGLVPALLKEKYADPF-FKNIKTVF 163
Query: 262 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 321
IHN+AYQG F E L LP + D ++ Y + +N++KAGI+ +D V TV
Sbjct: 164 TIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQ------VNFLKAGIVYADAVTTV 217
Query: 322 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 379
SP YA+E+++ E G LD ++ R + GI+NG+D WNP TD ++ Y A ++
Sbjct: 218 SPTYAREILTPEF-GEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA-DDLE 275
Query: 380 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 439
K K ALQ E+GLPVD + P+ GF+GRL EQKG D+L A+P ++ Q+++LG+G
Sbjct: 276 GKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD 335
Query: 440 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 499
E+ L +L YP + + ++ LAH+I AGADF L+PSRFEPCGL Q++AMRYGT
Sbjct: 336 PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGT 395
Query: 500 VPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553
VPIV +TGGL DTV + TGF F + + A+ +RRALA Y
Sbjct: 396 VPIVRATGGLADTVIDYNEDTGEGTGF---VF-------EGYNADALLAALRRALALYRD 445
Query: 554 Q-ALAEMMKNGMAQDLSWKGPAKKWEE 579
A ++ +N MAQD SW AK++ E
Sbjct: 446 PEAWRKLQRNAMAQDFSWDRSAKEYLE 472
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 541 bits (1396), Expect = 0.0
Identities = 208/514 (40%), Positives = 282/514 (54%), Gaps = 55/514 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW----DTDVV 140
+ +LFV E+AP++KTGGL DV+G LP ALAA GH V + P Y +D +
Sbjct: 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVEL 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
++L VG + V+ F GV F+D+P IYG DY DN RF
Sbjct: 61 VDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLF-----DRPGGIYGD----DYPDNAERF 111
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 260
+ +AA E L DVV A+DWHT+L+P LK +Y+P K V
Sbjct: 112 AFFSRAAAELLSGLGW--------QPDVV-HAHDWHTALVPALLKAVYRPN----PIKTV 158
Query: 261 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 320
F IHN+AYQG F +DF L LP ++ + Y + +N++K GI+ +D V T
Sbjct: 159 FTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-EFYGR------VNFLKGGIVYADRVTT 211
Query: 321 VSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVM 378
VSP YA+E+++ E G LD +++ K GI+NG+D + WNP TD Y+ Y A +
Sbjct: 212 VSPTYAREILTPE-FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADD-L 269
Query: 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 438
K KEALQ E+GLPVD ++P+ G I RL +QKG D+L AA+P ++ Q++VLGTG
Sbjct: 270 AGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTG 329
Query: 439 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 498
+E+ L +L YP R + ++ LAH+I AGADFIL+PSRFEPCGL QL+AMRYG
Sbjct: 330 DPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG 389
Query: 499 TVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552
TVPIV TGGL DTV +G TGF + D A+ + RAL Y
Sbjct: 390 TVPIVRRTGGLADTVVDGDPEAESGTGFL----------FEEYDPGALLAALSRALRLYR 439
Query: 553 T--QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584
+ KN M+QD SW AK++ E +L
Sbjct: 440 QDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 453 bits (1167), Expect = e-155
Identities = 196/507 (38%), Positives = 257/507 (50%), Gaps = 61/507 (12%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDVVIEL 143
+ ILFV +E AP KTGGLGDV+G LP ALAA GH V + P Y ++ D VV L
Sbjct: 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ V F H GV +D P + +G Y DN RF+
Sbjct: 61 DLFT----VLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFF 104
Query: 204 CQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 263
AA E L+ P D+V A+DWHT LIP LK Y Y K VF I
Sbjct: 105 SWAAAEF--AEGLDPR-----P-DIVH-AHDWHTGLIPALLKEKYWR--GYPDIKTVFTI 153
Query: 264 HNIAYQGRFAFEDFGLLNLPAQ-FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322
HN+AYQG F E G L LPA+ F G +I+++KAG+ +D V TVS
Sbjct: 154 HNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG--------QISFLKAGLYYADRVTTVS 205
Query: 323 PHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 380
P YA+E+ + E G L+ ++R K GI+NG+D WNP TD + Y A ++
Sbjct: 206 PTYAREITTPEF-GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADD-LEG 263
Query: 381 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 440
K K ALQ GLP D + P+ + RL EQKG D++ A+P +++ Q+++LGTG
Sbjct: 264 KAENKRALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDP 322
Query: 441 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 500
+E+ L YP K ++ LAH I AGAD L+PSRFEPCGL QL+A+RYGT+
Sbjct: 323 ELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTL 382
Query: 501 PIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553
PIV TGGL DTV E TGF F D + + +RRAL Y
Sbjct: 383 PIVRRTGGLADTVIDYNPEDGEA-TGF---VF-------DDFNAEDLLRALRRALELYRQ 431
Query: 554 QAL-AEMMKNGMAQDLSWKGPAKKWEE 579
L + + MAQD SW A+++ E
Sbjct: 432 PPLWRALQRQAMAQDFSWDKSAEEYLE 458
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-126
Identities = 187/513 (36%), Positives = 254/513 (49%), Gaps = 60/513 (11%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW--DTDVVIEL 143
ILFV +E+ P+ KTGGL DV+G LP ALA G V + P Y + + W VV +
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 144 ---KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPR--TGEDYQDNQL 198
K G + + GVD +D+P + T Y DN
Sbjct: 62 GVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL------------FKRPDSTLYGYYDNAE 109
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 258
RF+ AA E P D+V A+DW T L+P YLK + + Y
Sbjct: 110 RFAFFSLAAAEL-----APLGLISWLP-DIVH-AHDWQTGLLPAYLK--QRYRSGYI-IP 159
Query: 259 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 318
VF IHN+AYQG F + L LP + +SF Y + I+++K G+ +D V
Sbjct: 160 TVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-FYGQ------ISFLKGGLYYADAV 212
Query: 319 LTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDAST 376
TVSP YA E+ + + G L+ ++ K GI+NG+D WNP TD YI Y A
Sbjct: 213 TTVSPTYAGEIYT-PEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEV 271
Query: 377 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 436
+ AK K ALQ +GL VD P+ GF+ RL QKG D+L AI +++ Q+++LG
Sbjct: 272 -LPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLG 330
Query: 437 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 496
TG +E+ L L +P + V ++ PLAH+I AGAD IL+PSRFEPCGL QL+AMR
Sbjct: 331 TGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMR 390
Query: 497 YGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548
YGT+PIV TGGL DTV + TGF + ++ +RRAL
Sbjct: 391 YGTLPIVRETGGLADTVVDRNEWLIQGVGTGFL----------FLQTNPDHLANALRRAL 440
Query: 549 ATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 579
Y L ++ N M D SW AK++ E
Sbjct: 441 VLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVE 473
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 298 bits (766), Expect = 9e-95
Identities = 181/527 (34%), Positives = 258/527 (48%), Gaps = 88/527 (16%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
L +L V +E+ P KTGGL DV G LP AL A+G V T+ P Y V+ ++
Sbjct: 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY--------PAVLAGIE 55
Query: 145 VGDKIEKVR-FFHCHKR-------GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
+++ F R G+D +D P ++ + + GP G+D+ DN
Sbjct: 56 DAEQVHSFPDLFGGPARLLAARAGGLDLFVLDAP----HLYDRPGNPYVGP-DGKDWPDN 110
Query: 197 QLRFSLLCQAALE---------APRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTM 247
RF+ L +AA P I++ A+DW L P YL
Sbjct: 111 AQRFAALARAAAAIGQGLVPGFVPDIVH----------------AHDWQAGLAPAYLHYS 154
Query: 248 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG---YNKPVRGRK 304
+P VF IHN+A+QG+F E G L LP S+F +DG Y
Sbjct: 155 GRPA-----PGTVFTIHNLAFQGQFPRELLGALGLPP---SAFS-LDGVEYYGG------ 199
Query: 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNP 362
I ++KAG+ +D + TVSP YA E + G + G+ LD ++R+ + GI+NG+D WNP
Sbjct: 200 IGYLKAGLQLADRITTVSPTYALE-IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNP 258
Query: 363 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAI 422
TD+ I YD T + A+ K ALQA GL D + ++G I RL QKG D+L A+
Sbjct: 259 ATDELIAATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEAL 317
Query: 423 PHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 482
P + E Q+ +LG+G +E + YP + V ++ LAH+I AGAD +L+PS
Sbjct: 318 PTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPS 377
Query: 483 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGF-----TGFQMGSFSVDCEAVD 533
RFEPCGL QL A+RYG VP+VA GGL DTV E TG Q
Sbjct: 378 RFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS---------- 427
Query: 534 PVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 579
PV A++ +R+ A + + +NGM D+SW+ PA+ +
Sbjct: 428 PVTADALAAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQHYAA 474
|
Length = 485 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 1e-81
Identities = 101/259 (38%), Positives = 135/259 (52%), Gaps = 25/259 (9%)
Query: 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146
ILFV +E AP++KTGGL DV+G LP ALA GH V I PRY + + ++
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVI-ELY 59
Query: 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQA 206
V GVD F+D+P + + IYG G DY+DN RF+ +A
Sbjct: 60 VLFGYVGVARLELDGVDVYFLDNPEYFDR------PGIYGD-AGRDYEDNAERFAFFSRA 112
Query: 207 ALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 266
ALE R L D++ +DWHT L+P YLK Y +K+ K VF IHN+
Sbjct: 113 ALELLRKLG--------WKPDII-HCHDWHTGLVPAYLKEAYADDPFFKNIKTVFTIHNL 163
Query: 267 AYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYA 326
AYQG F + LL LP IDG +IN++KAGI+ +D V TVSP YA
Sbjct: 164 AYQGVFPADLLDLLGLPW----EDFSIDGLEFY---GQINFLKAGIVYADAVTTVSPTYA 216
Query: 327 QELVSGEDKGVELDNIIRK 345
+E+++ E G LD ++RK
Sbjct: 217 EEILTPEF-GEGLDGLLRK 234
|
Length = 234 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 248 bits (636), Expect = 1e-75
Identities = 113/359 (31%), Positives = 192/359 (53%), Gaps = 27/359 (7%)
Query: 233 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 292
+DW+ L+P LKT+Y +K K V IHN+ QG F+ F L LP + S
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH- 205
Query: 293 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 350
G ++N + G+ +D++ T SP YA+E+ ++ LD ++ RK + G
Sbjct: 206 -------REGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHG 258
Query: 351 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 410
I+NG+D ++WNP TDK I +Y +D K K+AL EVGLP D P++G I +
Sbjct: 259 ILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLEEVGLPFDEETPLVGVIINFD 317
Query: 411 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470
+ +G+++LA ++ ++ ++Q+++ G+G K EK+ + +PE+ +F H+
Sbjct: 318 DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
Query: 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFS 526
IAG D +L+P + E CG++Q+ AM YGT+P+ + GG+V+T+EE +GF ++
Sbjct: 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT 437
Query: 527 VDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 584
+ A+ + ALA Y + E++ M +D SWK A+++ + L
Sbjct: 438 PE----------ALVAKLGEALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYREL 486
|
Length = 489 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 228 bits (582), Expect = 2e-64
Identities = 166/525 (31%), Positives = 258/525 (49%), Gaps = 72/525 (13%)
Query: 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-----QYKDAWDTD 138
GL+I+ + E+AP +K GGL DV+ GL AL GH V + P+YD Q ++ D
Sbjct: 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLD 540
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
VV+E + K + + G+ F++ HP +K + + Q YG D+
Sbjct: 541 VVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP---SKFFWRAQ--YYGE------HDD 589
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI-PCYLKTMYKPKGMYK 255
RFS +AALE L S K D++ +DW T+ + P Y +Y PKG +
Sbjct: 590 FKRFSYFSRAALE----LLYQSGK----KPDIIH-CHDWQTAFVAPLYWD-LYAPKG-FN 638
Query: 256 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-----KINWMKA 310
SA++ F HN YQG D L + ++P R + +IN +K
Sbjct: 639 SARICFTCHNFEYQGTAPASDLASCGLD---------VHQLDRPDRMQDNAHGRINVVKG 689
Query: 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 370
I+ S++V TVSP YAQE+ S +G++ GI+NG+D WNP TD+++ V
Sbjct: 690 AIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKV 749
Query: 371 KYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 429
+Y+A+ + K K AL+ ++GL D + P++G I RL QKG ++ AI +
Sbjct: 750 QYNAND-LQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELG 808
Query: 430 VQIIVLGTGKKP-MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEP 486
Q ++LG+ P ++++ E + + R + K++ L+H I A +D +IPS FEP
Sbjct: 809 GQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEP 868
Query: 487 CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP----------VD 536
CGL Q+ AMRYG+VPIV TGGL D+V F D E + D
Sbjct: 869 CGLTQMIAMRYGSVPIVRKTGGLNDSV-----------FDFDDETIPVELRNGFTFLTPD 917
Query: 537 VAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 579
+++ + RA Y + ++++ M D SW A ++EE
Sbjct: 918 EQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEE 962
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 7e-59
Identities = 156/519 (30%), Positives = 235/519 (45%), Gaps = 101/519 (19%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
++I+ + E+AP +K GGLGDV+ L A+ H V I P+YD + D+ +
Sbjct: 588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRS 647
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSL 202
+++ + G+ F++ + F A +YG R ++ RF
Sbjct: 648 YSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGC-------VYGCR------NDGERFGF 694
Query: 203 LCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 262
C AALE SG + + +DW ++ + K Y G+ K A+VVF
Sbjct: 695 FCHAALEFLLQ---------SGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSK-ARVVFT 744
Query: 263 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322
IHN+ +FG N + + +D TVS
Sbjct: 745 IHNL---------EFG--------------------------ANHIGKAMAYADKATTVS 769
Query: 323 PHYAQELVSGEDKGVELDNIIRKTG-IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 381
P Y++E VSG I GI+NG+D W+P D +I V Y + V++ K
Sbjct: 770 PTYSRE-VSGNSA------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGK 822
Query: 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 441
KEALQ +GL ++P++G I RL QKG ++ AI ++ N Q+++LG+ P
Sbjct: 823 RAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDP 881
Query: 442 MEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 496
+ QL + ++AR ++ PL+H+I AGADFIL+PS FEPCGL QL AMR
Sbjct: 882 RIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMR 941
Query: 497 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-------CEAVDP-------VDVAAVST 542
YG++P+V TGGL DTV F VD + ++P D A V
Sbjct: 942 YGSIPVVRKTGGLFDTV-----------FDVDHDKERAQAQGLEPNGFSFDGADAAGVDY 990
Query: 543 TVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 579
+ RA++ + G + K M QD SW PA + E
Sbjct: 991 ALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 5e-26
Identities = 84/361 (23%), Positives = 135/361 (37%), Gaps = 96/361 (26%)
Query: 224 GPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 283
+DVV A+DW L + +V +H +
Sbjct: 84 ERFDVV-HAHDWLALLAAALAARLLG-------IPLVLTVHGLE---------------- 119
Query: 284 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII 343
F + + + +D ++ VS +EL E GV + I
Sbjct: 120 ------FGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR--ELGGVPPEKIT 171
Query: 344 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403
I NG+D + + P A + +G+P D PVI
Sbjct: 172 V------IPNGVDTERFRPAPR---------------------AARRRLGIPEDE--PVI 202
Query: 404 GFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461
F+GRL +KG D+L A+ KE +V+++++G G P+ ++LE L G+
Sbjct: 203 LFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--PLREELEALA-----AELGLG 255
Query: 462 KF-----NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTV 513
+P + A AD ++PS +E GL+ L AM G P+VAS GG+ + V
Sbjct: 256 DRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPEVV 314
Query: 514 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG---MAQDLS 569
E+G TG V P D A++ + R L L + + +A+ S
Sbjct: 315 EDGETGL----------LVPPGDPEALAEAILRLLD---DPELRRRLGEAARERVAERFS 361
Query: 570 W 570
W
Sbjct: 362 W 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-14
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 63/297 (21%)
Query: 294 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 353
D P + ++ + +D V+ VS A EL + I + I N
Sbjct: 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---------LGIDPEKVTVIPN 178
Query: 354 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 413
G+D + ++P A ++GLP D+ VI F+GRL +K
Sbjct: 179 GVDTERFSPA---------------------DRAEARKLGLPEDK--KVILFVGRLVPRK 215
Query: 414 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-------- 463
G D L A+ +K+ +V ++++G G P+ + LE L G+
Sbjct: 216 GIDYLIEALARLLKKRPDVHLVIVGDG--PLREALEAL-----AAELGLEDRVTFLGAVP 268
Query: 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQM 522
+ + A AD ++PS E GL+ L AM G P+VA+ GG+ + + +G G
Sbjct: 269 HEEVP-AYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPEIITDGENGLL- 325
Query: 523 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 579
V P D A++ + R LA + + + SW+ A++ E
Sbjct: 326 ---------VPPGDPEALAEAILRLLADPWLRLGRAARRRVAER-FSWENVAERLLE 372
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.0 bits (183), Expect = 2e-14
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQ 448
+GL + V+ ++GRL+ +KG D+L A K +++++++G G + E+ +
Sbjct: 190 RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKL 249
Query: 449 LEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 504
+ L E KF + ++A AD ++PS E GL+ L AM GT I +
Sbjct: 250 AKKLGLED---NVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 505 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNG 563
GG+ + VE+G TG V P DV ++ + + L + L E +
Sbjct: 307 DVGGIPEVVEDGETGL----------LVPPGDVEELADALEQLLEDPELREELGEAARER 356
Query: 564 MAQDLSWKGPAKKWEETLLNL 584
+ ++ SW+ A++ E L
Sbjct: 357 VEEEFSWERIAEQLLELYEEL 377
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 6e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 460
P+I F+GRL +KG D+L A +++ + ++ G EK+L++L + + +
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVI 62
Query: 461 AKFNIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 518
+P +I AD ++PSR+E GL+ L AM G I GG + V++G T
Sbjct: 63 FVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGET 122
Query: 519 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549
G VDP D A++ + + L
Sbjct: 123 GL----------LVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 8e-13
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ---IIVLGTGKKP 441
EA +A + D+ P I +GRL+ +KG D L A + + +IV G
Sbjct: 207 AEARRARLLRDPDK--PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI 264
Query: 442 MEKQLEQLEILYPEKARGVA-KFNIPLAH------MIIAGADFILIPSRFEPCGLIQLHA 494
+ E+L L + GV + + P + AD + P+ +EP GL L A
Sbjct: 265 LAMDEEELREL--ARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEA 322
Query: 495 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549
M G P+VA+ GG D V +G TG VDP D A++ +RR L
Sbjct: 323 MACGL-PVVATAVGGPRDIVVDGVTGL----------LVDPRDPEALAAALRRLLT 367
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 9e-12
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 336 GVELDNIIRKTGIK------GIVNGM--DVQEWNP-LTDKYIGVKYDASTVMDAKPLLKE 386
G +L + KT I+ + GM D+ ++ P L + + V Y+ + KP
Sbjct: 130 GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN 189
Query: 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL 446
+ G +DR+ P I F+GR+ QKG L A+ H+I ++VQ+ VL G +
Sbjct: 190 VVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAV-HYIPKDVQV-VLCAGAPDTPEVA 245
Query: 447 EQLEILYPEKAR---GVAKFN----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 499
E++ R G+ N +++ A+ + PS +EP G++ L AM GT
Sbjct: 246 EEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT 305
Query: 500 VPIVAS-TGGLVDTVEEGFTGF 520
P+VAS TGG+ + V +G TGF
Sbjct: 306 -PVVASATGGIPEVVVDGETGF 326
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 1e-11
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 405 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 463
F+GRL +KG D L A + + ++ G P + LE+L R V
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDR-VIFLG 167
Query: 464 ---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 520
L +++A AD ++PS E GL+ L AM G I GG + VE+G TG
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 2e-11
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 384 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG--TGK 439
+ L+ ++ + D V+ + GR+ KG +L A N++++V+G T
Sbjct: 179 PQPNLRQQLNISPDET--VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTAS 236
Query: 440 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------------ADFILIPSRF-E 485
EK Q ++L K G I+ G AD +++PS+ E
Sbjct: 237 SKGEKAAYQKKVLEAAKRIG--------DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEE 288
Query: 486 PCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544
++ + AM G P++AST GG+ + V EG TG+ + +P+ ++ + +
Sbjct: 289 AFCMVAVEAMAAGK-PVLASTKGGITEFVLEGITGYHLA---------EPMTSDSIISDI 338
Query: 545 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583
R LA +AE K+ + SW+G +++EE + N
Sbjct: 339 NRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
|
Length = 380 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 6e-10
Identities = 65/352 (18%), Positives = 117/352 (33%), Gaps = 107/352 (30%)
Query: 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 285
DVV +++ + K++ HN +L +
Sbjct: 82 PDVVISHLTTTPNVLALLAARL--------GTKLIVWEHN---------------SLSLE 118
Query: 286 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 345
K + R + ++ +D ++ VS ++L+ I
Sbjct: 119 LKR------------KLRLLLLIRKLYRRADKIVAVSEGVKEDLLK--------LLGIPP 158
Query: 346 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405
I+ I N +D+ ++ + + L + + PVI
Sbjct: 159 DKIEVIYNPIDI------------------------EEIRALAEEPLELGIPPDGPVILA 194
Query: 406 IGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463
+GRL QKG D L A KE + ++++LG G P+ ++LE L +
Sbjct: 195 VGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDG--PLREELEAL----------AKEL 242
Query: 464 NI------------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV 510
+ P ++ AD ++ SR+E + L AM GT P+VA+ G
Sbjct: 243 GLADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGFPNVLLEAMALGT-PVVATDCPGPR 299
Query: 511 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 562
+ +E+G G V D AA++ L L E +
Sbjct: 300 EILEDGENGL----------LVPVGDEAALAAAALALLDLLLDPELRERLAA 341
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 34/191 (17%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 459
PV+ ++GRL +K + L A + V+++++G G P +LE YP
Sbjct: 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG--PARARLEAR---YPN---- 248
Query: 460 VAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVE 514
F L A AD + PSR E GL+ L AM G +P+VA GG D V
Sbjct: 249 -VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAGGPADIVT 306
Query: 515 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPA 574
+G G V+P D A + + LA MA +
Sbjct: 307 DGENGL----------LVEPGDAEAFAAALAALLAD-PELRRR------MAARARAEAER 349
Query: 575 KKWEETLLNLE 585
+ WE L NL
Sbjct: 350 RSWEAFLDNLL 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 395 PVDRNIPVIGFIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL 452
P+ + PV F+ RL + KG D L AA I NV+++++G G + + ++E L
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242
Query: 453 YPEKARGVAKF-----NIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVAS 505
G +F ++P ++A AD ++PS E P L++ AM G P++A+
Sbjct: 243 ---GLEGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLE--AMAMG-RPVIAT 293
Query: 506 -TGGLVDTVEEGFTGF 520
G + V +G GF
Sbjct: 294 DVPGCREAVIDGVNGF 309
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 57/199 (28%)
Query: 405 FIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQL--------EILYP 454
+GRL QKG D+L A A + ++ ++G G P + LE L ++
Sbjct: 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG--PEREALEALIKELGLEDRVILL 240
Query: 455 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS--TGGLVDT 512
+ + ++ A A ++ SRFE ++ L AM +G +P+++ G +
Sbjct: 241 GFTKNIEEY--------YAKASIFVLTSRFEGFPMVLLEAMAFG-LPVISFDCPTGPSEI 291
Query: 513 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--------- 563
+E+G G V DV ALA +AL +M++
Sbjct: 292 IEDGVNGL----------LVPNGDVE--------ALA----EALLRLMEDEELRKRMGAN 329
Query: 564 ---MAQDLSWKGPAKKWEE 579
A+ S + K+WEE
Sbjct: 330 ARESAERFSIENIIKQWEE 348
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEK 444
+A +GLP+D V+ F+GR++ K D+L A+ + N+++IV+G
Sbjct: 210 RARLGLPLDT--KVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLA 267
Query: 445 QLEQLEILYPEKARGVAK---FNIP-----LAHMIIAGADFILIPSRFEPCGLIQLHAMR 496
+ L L E G+A F P L H+ A AD + +PS E GL+ + A
Sbjct: 268 TPDALIELAAE--LGIADRVRFLPPRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQA 324
Query: 497 YGTVPIVASTGGLVDTVEEGFTGF 520
GT + A GGL V +G TG
Sbjct: 325 CGTPVVAARVGGLPVAVADGETGL 348
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 7e-08
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 402 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461
GFIG+L KG D+L A + +++++++G G + E+ +LE + G
Sbjct: 193 RFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESY-ELEGDPRVEFLGAY 251
Query: 462 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 520
A D +++PS + E L+ A+ G I + GG+ + V +G G
Sbjct: 252 PQEEIDDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
Query: 521 QMGSFSVDCEAVDPVDVAAV 540
F D D+AA
Sbjct: 310 ---LFPPG----DAEDLAAA 322
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 8e-08
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL---AAAIPHFIKENVQIIVL 435
D + E P F+GRL KG D+L AAA+P + ++++
Sbjct: 170 DPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-----DAPLVIV 224
Query: 436 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI--------IAGADFILIPS--RFE 485
G G P+E +LE L G+ + + +A D + PS R E
Sbjct: 225 GEG--PLEAELEALAAAL-----GLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSE 276
Query: 486 PCGLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 539
G++ L AM +G P++++ G G TG V P D AA
Sbjct: 277 AFGIVLLEAMAFG-KPVISTEIGTGGSYVNLHGVTGL----------VVPPGDPAA 321
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 31/207 (14%)
Query: 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKP 441
+ P+ + +I F+GRL +KG D+L A + + +++ G +
Sbjct: 188 LPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-RFPDWHLVIAGPDEGG 246
Query: 442 MEKQLEQLEILYPEKARGVAK---FNIPLAHMIIAG----ADFILIPSRFEPCGLIQLHA 494
+L+Q+ A G+ F L A AD ++PS E G++ A
Sbjct: 247 YRAELKQI-----AAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEA 301
Query: 495 MRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 552
+ GT P+V + + +E G C V DV A++ +RRAL
Sbjct: 302 LACGT-PVVTTDKVPWQELIEYG------------CGWVVDDDVDALAAALRRALELPQR 348
Query: 553 TQALAEMMKNGMAQDLSWKGPAKKWEE 579
+A+ E + + + SW A++ E
Sbjct: 349 LKAMGENGRALVEERFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 458
PV+ ++GRL ++K D L A +KE +V+++++G G P ++LE+L +
Sbjct: 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG--PEREELEEL-----AREL 255
Query: 459 GVAKF----------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STG 507
G+A +P + AD + S E GL+ L AM G P+VA
Sbjct: 256 GLADRVIFTGFVPREELPDYY---KAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP 311
Query: 508 GLVDTVEEGFTGF 520
GL D V +G GF
Sbjct: 312 GLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 351 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 410
I NG+D + P K ++ L GLP D+ I + G +G +
Sbjct: 164 IPNGIDTTIFRPR----------------DKREARKRL----GLPADKKIILFGAVGGTD 203
Query: 411 EQKGSDILAAA---IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--I 465
+KG D L A + K++++++V G + L P + N
Sbjct: 204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDL-------PFPVHYLGSLNDDE 256
Query: 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGS 524
LA +I + AD ++PS E + A+ GT P+VA GG+ D V+ G TG+
Sbjct: 257 SLA-LIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDHGVTGY---- 310
Query: 525 FSVDCEAVDPVDVAAVSTTVRRALA 549
P D ++ + LA
Sbjct: 311 ------LAKPGDPEDLAEGIEWLLA 329
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL--EILYPEK 456
P I F+GR E+KG +L A + V+++++G G P+ LE L + +
Sbjct: 189 PRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDG--PLLAALEALARALGLGGR 246
Query: 457 AR--GVAKFNIPLAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS-TG 507
G M A L PS P ++ L A G VP+VA+ G
Sbjct: 247 VTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-VPVVATRHG 303
Query: 508 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560
G+ + VE+G TG V DVAA++ + R LA L M
Sbjct: 304 GIPEAVEDGETGL----------LVPEGDVAALAAALGRLLA---DPDLRARM 343
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 458
+I F+GRL+E KG D L A +K+ N +++++G G Y +
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGD-------------YSRYLQ 274
Query: 459 GVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505
K + + G AD ++PS E C + + M +G +P++ +
Sbjct: 275 ECKKI---WSKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHG-LPLIGT 330
Query: 506 TG-GLVDTVEEGFTG 519
T GL + +E+G G
Sbjct: 331 TSTGLSEMIEDGLNG 345
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEIL-YP 454
I IG G G L +++ +V++ ++G+G + + + + L +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFV 60
Query: 455 EKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTV 513
E + +A AD L P RF L L A+ G P+VA+ G
Sbjct: 61 EDLAAL-----------LASADVALAPLRFGAGSPLKLLEALAAGL-PVVATDIGAEGLP 108
Query: 514 EEGFTGF 520
E+ G
Sbjct: 109 EDLGWGV 115
|
Length = 134 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 43/221 (19%)
Query: 351 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 410
I NG+D + ++P D + L+ E+GLP + +IG + RL
Sbjct: 164 IPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLH 203
Query: 411 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470
QK L A +K+ +L G P LE L + + +
Sbjct: 204 PQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE-LGLEDKVILLGERSDV 262
Query: 471 --IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 527
++ D ++ S E + L AM G +P+VA+ G + V + TGF
Sbjct: 263 PALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVGDNAELVGD--TGF------- 312
Query: 528 DCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKN 562
V P D A++ + LA G A + +N
Sbjct: 313 ---LVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 370
I +SD V VS +E EL +I + I+ I N +D +
Sbjct: 141 SIEKSDGVTAVSESLKEETY-------ELFDIDKP--IEVIPNFVDTDRY---------- 181
Query: 371 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI---GF--IGRLEEQKGSDILAAAIPHF 425
+ AL+ ++G P D + +I F + R+E D++ +
Sbjct: 182 ----------RRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVE-----DVIE--VFAR 223
Query: 426 IKENV--QIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGADFIL 479
+++ V +++++G G + P E+ + +L + F +++ +D L
Sbjct: 224 VQQEVPAKLLLVGDGPERSPAEQLVRELGL------TDRVLFLGKQDDVAELLSISDLFL 277
Query: 480 IPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 520
+PS E GL L AM G VP++AS GG+ + VE G TGF
Sbjct: 278 LPSEKESFGLAALEAMACG-VPVIASNAGGIPEVVEHGVTGF 318
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 36/210 (17%)
Query: 377 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIV 434
V D E+L+A GL PV+ G L KG ++L A+P + + +V+++V
Sbjct: 165 VPDPPAEPPESLKALGGLD---GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLV 221
Query: 435 LGTGKKPMEKQLEQLEILYPEKAR-GVAK---FN---IPLA--HMIIAGADFILIPSRFE 485
G + Y R G+A F +P + + AD +++P R
Sbjct: 222 AG---ETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA 278
Query: 486 PC---GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 542
G++ A+ +G P++++ G + V +G TG V P D AA++
Sbjct: 279 DQTQSGVLAY-AIGFG-KPVISTPVGHAEEVLDGGTGL----------LVPPGDPAALAE 326
Query: 543 TVRRALATYGTQALAEMMKNG--MAQDLSW 570
+RR LA + + A+ +SW
Sbjct: 327 AIRRLLADP--ELAQALRARAREYARAMSW 354
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 520
+++ AD L+PS E GL L AM G + ++ GG+ + V+ G TGF
Sbjct: 267 LLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGF 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 43/197 (21%)
Query: 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPM 442
E P + ++ +GRL E+KG D L A+ + IV G G P+
Sbjct: 166 ERFPPRPPPPPGEPLRIL-SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDG--PL 221
Query: 443 EKQLEQLEILYPEKARGVAKFNIPL-----AHMIIA---GAD-FILIPSRFEPCGLIQ-- 491
+LE L G+ + L + AD F+L PS G +
Sbjct: 222 RDELEAL-----IAELGLED-RVTLLGAKSQEEVRELLRAADLFVL-PSVTAADGDREGL 274
Query: 492 ----LHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546
+ AM G +P++++ G+ + VE+G TG V P D A++ + R
Sbjct: 275 PVVLMEAMAMG-LPVISTDVSGIPELVEDGETGL----------LVPPGDPEALADAIER 323
Query: 547 ALATYGTQALAEMMKNG 563
L + EM + G
Sbjct: 324 LLDD--PELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 402 VIGFIGRLEEQKGSDILAAAIPHF------IKENVQIIVLGTGKKPMEKQLEQLEILYPE 455
V+G +GRL+ K L A E ++++++G G P EQ+
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PARGACEQMV----- 248
Query: 456 KARGVA--------KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 506
+A G+A + ++P ++ D ++PS E L AM G +P++A+
Sbjct: 249 RAAGLAHLVWLPGERDDVP---ALMQALDLFVLPSLAEGISNTILEAMASG-LPVIATAV 304
Query: 507 GGLVDTVEEGFTG 519
GG + V+ G TG
Sbjct: 305 GGNPELVQHGVTG 317
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 397 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQ 448
D + I I RL +KG D+L IP K NV+ I+ G G P LE+
Sbjct: 190 DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDG--PKRILLEE 241
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 74/266 (27%)
Query: 255 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 314
+ VV IH++ F + ++ R ++ +
Sbjct: 102 RGVPVVVTIHDLIP---------------------LRFPEYFSPGFRRYFRRLLRRALRR 140
Query: 315 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 374
+D ++TVS ++L+ +Y+GV D
Sbjct: 141 ADAIITVSEATKRDLL-----------------------------------RYLGVPPDK 165
Query: 375 STVM------DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 428
V+ +P EA + R P ++G +E +K + L A +
Sbjct: 166 IVVIPLGVDPRFRPPPAEAEVLRALYLLPR--PYFLYVGTIEPRKNLERLLEAFARLPAK 223
Query: 429 --NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHM--IIAGADFILIPS 482
+ +++++G E+ L +L L +F + + + GA + PS
Sbjct: 224 GPDPKLVIVGKRGWLNEELLARLREL---GLGDRVRFLGYVSDEELAALYRGARAFVFPS 280
Query: 483 RFEPCGLIQLHAMRYGTVPIVASTGG 508
+E GL L AM GT P++AS
Sbjct: 281 LYEGFGLPVLEAMACGT-PVIASNIS 305
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD--ILAAAIPHFIKE---NVQIIVLGTGK 439
+ L P+ + PVI GRL KG + I A A +K+ +V ++++G +
Sbjct: 170 ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR---LKKDDPDVHLLIVGDAQ 226
Query: 440 KPMEKQLEQLEILYPEKARGVAKF-----NIPLAHMIIAGADFILIPS-RFEPCGLIQLH 493
E LE++ + F ++P A+ + AD ++ S E G +
Sbjct: 227 GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYAL---ADIVVSASTEPEAFGRTAVE 283
Query: 494 AMRYGTVPIVASTGGLVDTVEEGFTGF 520
A G I + GG +TV G TG
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGL 310
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 401 PVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 457
P+I ++GRL +K D L +P ++ +G G P ++LE++
Sbjct: 264 PLIVYVGRLGAEKNLDFLKRVMERLP-----GARLAFVGDG--PYREELEKM-------- 308
Query: 458 RGVAKFNIPLAHMI--------IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG 508
A M+ A D ++PS E G + L AM G VP+VA+ GG
Sbjct: 309 --FAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG 365
Query: 509 LVDTV---EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561
+ D + +EG TGF VD + V+ ++ +R G A E+ K
Sbjct: 366 IPDIIPPDQEGKTGFLYTPGDVD-DCVEKLETLLADPELR---ERMGAAAREEVEK 417
|
Length = 465 |
| >gnl|CDD|222577 pfam14172, DUF4309, Domain of unknown function (DUF4309) | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.004
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 17/89 (19%)
Query: 120 RVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG- 178
+A +D Y ++ G +I ++R F + G+ + K G
Sbjct: 38 SPDYVANAFDLYATYMGPNLAFGYNKGGQIFEIRSFDTNLEGI------TLKEIKKQLGE 91
Query: 179 -------KTQSKIYGPRTGEDYQDNQLRF 200
KT KIY + G+DY +L F
Sbjct: 92 PDSVVTTKTDEKIYVYKVGKDY---ELLF 117
|
This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homologue of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length. Length = 133 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 609 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.98 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.92 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.88 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.88 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.86 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.86 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.86 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.85 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.84 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.79 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.78 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.77 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.76 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.74 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.73 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.7 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.7 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.58 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.58 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.5 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.49 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.49 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.42 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.4 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.37 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.35 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.32 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.24 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.22 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.16 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.14 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 99.13 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.11 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 99.1 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.09 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.86 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.85 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.67 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.58 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.57 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.57 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.54 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.53 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.51 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.44 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.33 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.3 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.27 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.11 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.11 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.1 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.07 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.95 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.9 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.83 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.79 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.75 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.72 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 97.37 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.24 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.19 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 97.18 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.09 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.06 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.01 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.95 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 96.86 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.65 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.81 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 95.38 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 95.34 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 94.25 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 93.96 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 93.83 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 93.38 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 93.21 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 93.13 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 92.13 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 91.65 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 91.28 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 91.23 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 91.19 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 90.87 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 90.72 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 90.35 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 89.38 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 89.11 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 89.05 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 88.96 | |
| PLN02208 | 442 | glycosyltransferase family protein | 88.8 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 88.6 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 88.54 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 88.53 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 87.99 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 87.44 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 87.43 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 87.28 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 86.78 | |
| PLN02764 | 453 | glycosyltransferase family protein | 86.19 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 86.0 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 85.71 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 85.24 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 84.6 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 84.44 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 84.16 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 84.04 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 82.89 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 82.44 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 82.04 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 80.57 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-68 Score=593.08 Aligned_cols=468 Identities=33% Similarity=0.565 Sum_probs=393.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCC-----ceEEEEEeCCEEeeEEEEE
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-----DVVIELKVGDKIEKVRFFH 156 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (609)
.++|||+||++|+.|+.++||++++++.|+++|+++||+|.||+|.|+.....+.. .......+++.....++++
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 46899999999999999999999999999999999999999999999876522111 1122223444344578888
Q ss_pred eeEcCeeEEEEeC--c-chhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEec
Q 007300 157 CHKRGVDRVFVDH--P-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVAN 233 (609)
Q Consensus 157 ~~~~gv~~~~v~~--~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h 233 (609)
...+||+++||++ + .|+.+ ..+|| |.|+..||.+||+++++++...++ +|||| |+|
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~--------~PDII-H~H 617 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK--------KPDII-HCH 617 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC--------CCCEE-EEC
Confidence 8889999999984 3 26665 57886 789999999999999999988754 49999 999
Q ss_pred ccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhh
Q 007300 234 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 313 (609)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 313 (609)
||++++++.+++..|...+ +.++|+|+||||+.|||.|+...+..++++..++...+..... +...+++++.++.
T Consensus 618 DW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~----~~~~iN~LK~GIv 692 (977)
T PLN02939 618 DWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN----AHGRINVVKGAIV 692 (977)
T ss_pred CccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc----cCCchHHHHHHHH
Confidence 9999998655555454433 4788999999999999999888877788876654322111111 2346899999999
Q ss_pred cCCEEEeeCHHHHHHHhcccCCCccchhhhc--cCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 314 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
.||.|+|||+.|++++.. .+|..++..+. ..++.+|+||+|.+.|+|.++++|+.+|+..++ .+|..++.+++++
T Consensus 693 ~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLRke 769 (977)
T PLN02939 693 YSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAALRKQ 769 (977)
T ss_pred hCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHHHHH
Confidence 999999999999999986 35555555443 458999999999999999999999999999996 6999999999999
Q ss_pred hCCCCC-CCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHhCC--CceEEEeecChHH
Q 007300 392 VGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFNIPL 467 (609)
Q Consensus 392 ~gl~~~-~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~~~~ 467 (609)
+|++.+ ++.|+|+|+||+.++||++.+++|+..+.+.+++|+|+|+|+ +.+++.++++..+++ ++|.+.+.++...
T Consensus 770 lGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~l 849 (977)
T PLN02939 770 LGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEAL 849 (977)
T ss_pred hCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHH
Confidence 999864 567999999999999999999999998877789999999996 456788888888775 4688888889888
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc---------CcceeEecccccccccCCCCCHH
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~---------~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
.+.+|++||++|+||++|+||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.|++
T Consensus 850 ah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~D~e 919 (977)
T PLN02939 850 SHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTPDEQ 919 (977)
T ss_pred HHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCCCHH
Confidence 889999999999999999999999999999999999999999999875 5799988 999999
Q ss_pred HHHHHHHHHHHhh--CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 539 AVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 539 ~la~~I~~ll~~~--~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++++|.+++..+ +++.+.+|+++++.++|||+.++++|+++|++++..+
T Consensus 920 aLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~~ 971 (977)
T PLN02939 920 GLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVARA 971 (977)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999998743 3678899999999999999999999999999998643
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-67 Score=571.12 Aligned_cols=467 Identities=38% Similarity=0.610 Sum_probs=387.2
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCce-EEEEEeCCEEeeEEEEEeeEc
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (609)
|++|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|++..+...... ...+.+.. ....++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5789999999999999999999999999999999999999999999998854432221 11221110 114677888889
Q ss_pred CeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchH
Q 007300 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI 240 (609)
Q Consensus 161 gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~ 240 (609)
||+++|++++.|+.+ ...+|+...|.+|.|+..||.+||++++++++.+... .+|||| |+|||+++++
T Consensus 80 ~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~------~~pDIi-H~Hdw~~~l~ 147 (485)
T PRK14099 80 GLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPG------FVPDIV-HAHDWQAGLA 147 (485)
T ss_pred CceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccC------CCCCEE-EECCcHHHHH
Confidence 999999999999886 1248988778889999999999999999988764211 159999 9999999999
Q ss_pred HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEe
Q 007300 241 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 320 (609)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 320 (609)
|.+++...+ .++|+|+|+||+.+|+.++...+..++++...+.. ++. .+...+++++.++..||.|++
T Consensus 148 ~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~k~~i~~ad~vit 215 (485)
T PRK14099 148 PAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGV---EYYGGIGYLKAGLQLADRITT 215 (485)
T ss_pred HHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhh---hhCCCccHHHHHHHhcCeeee
Confidence 998874221 46899999999999999887777777776544321 111 112345789999999999999
Q ss_pred eCHHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 321 VSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 321 vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
||+.+++++.+ ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|+..++ .++..++..+++++|++.++
T Consensus 216 VS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~ 293 (485)
T PRK14099 216 VSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDPDP 293 (485)
T ss_pred cChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCccc
Confidence 99999999985 23344333333 2348999999999999999999999999998885 67888889999999998777
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
+.++|+++||+.++||++.|++|++.+.+.+++|+|+|+|++.+++.++++..++++++..+.+++.+..+.++++||++
T Consensus 294 ~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 294 DALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred CCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEE
Confidence 78999999999999999999999999977789999999998778889999988887777666777666665556789999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---------cceeEecccccccccCCCCCHHHHHHHHHHH--
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA-- 547 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l-- 547 (609)
++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~a~~ 443 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRKTAA 443 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875 689987 999999999999984
Q ss_pred -HHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 548 -LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 548 -l~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
+++ ++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 444 l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 444 LFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 444 67889999999999999999999999999999754
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-66 Score=567.79 Aligned_cols=467 Identities=29% Similarity=0.576 Sum_probs=391.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCcccc-CCC-c----eEEEEEeCCEEeeEEEEEee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D----VVIELKVGDKIEKVRFFHCH 158 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~~ 158 (609)
|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|..+.+. +.. . ..+.+.+++.....+.....
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTA 85 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEec
Confidence 99999999999999999999999999999999999999999999987653 211 1 11223333322223332322
Q ss_pred E--cCeeEEEEeCcchhhhhcCCCCCeeccCC-CCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccc
Q 007300 159 K--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDW 235 (609)
Q Consensus 159 ~--~gv~~~~v~~~~~~~~~~~~~~~~~y~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~ 235 (609)
. .||++++++++.|+.+ ..+|+.. .|.+|.|+..||.+||++++++++.+.+ +|||| |+|||
T Consensus 86 ~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~--------~pDii-H~hdw 150 (489)
T PRK14098 86 LPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW--------KPDII-HCHDW 150 (489)
T ss_pred ccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC--------CCCEE-EecCc
Confidence 3 3799999999999887 5799876 5788999999999999999999987654 49999 99999
Q ss_pred ccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcC
Q 007300 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 315 (609)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 315 (609)
+++++|.+++..+.....+.++|+|+|+||+.+||.++...+..+ ++..+...+. .....+++++.++..|
T Consensus 151 ~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~i~~a 221 (489)
T PRK14098 151 YAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTGVEHA 221 (489)
T ss_pred HHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHHHHhc
Confidence 999999999887654444568999999999999998776554433 3333221110 0123579999999999
Q ss_pred CEEEeeCHHHHHHHhcccCCCccchhhhc--cCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhC
Q 007300 316 DMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 393 (609)
Q Consensus 316 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 393 (609)
|.|++||+.+++++.+...+|..++.+++ ..++.+|+||+|.+.|+|.+++.+..+|+.+++ .+|..++..+++++|
T Consensus 222 d~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~~lg 300 (489)
T PRK14098 222 DLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLEEVG 300 (489)
T ss_pred CcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHHHhC
Confidence 99999999999999852233333444443 358999999999999999999889999998875 578888999999999
Q ss_pred CCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH
Q 007300 394 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 394 l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~ 473 (609)
++.+++.|+|+++||+.++||++.|++|++++.+.+++|+|+|+|+..+++.++++..++++++.+.+.++.++++.+|+
T Consensus 301 l~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a 380 (489)
T PRK14098 301 LPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIA 380 (489)
T ss_pred CCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHH
Confidence 99888889999999999999999999999999877999999999987788999999998888899999999999999999
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc----CcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~----~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
+||++++||++|+||++++|||+||+|||++++||+.|++.+ +.+|+++ ++.|+++++++|.++++
T Consensus 381 ~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 381 GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGEALA 450 (489)
T ss_pred hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998864 6799987 99999999999999875
Q ss_pred hh-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 550 TY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 550 ~~-~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
.+ +++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 451 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 451 LYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 43 25788889998899999999999999999998863
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=540.33 Aligned_cols=459 Identities=45% Similarity=0.775 Sum_probs=392.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCC----CceEEEEEeCCEEeeEEEEEeeEc
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD----TDVVIELKVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 160 (609)
|||++|+.|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.+. ......+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 8999999999999999999999999999999999999999999998765433 234455667777888899999999
Q ss_pred CeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchH
Q 007300 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI 240 (609)
Q Consensus 161 gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~ 240 (609)
|+++++++++.++.+ ...+|+. +|.++..||.+|+++++++++..+. +|||| |+|+|+++++
T Consensus 81 ~v~~~~i~~~~~~~r-----~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~--------~~Dii-H~hdw~~~~~ 142 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW--------QPDVV-HAHDWHTALV 142 (473)
T ss_pred CceEEEEECHHHcCC-----CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC--------CCCEE-EECCcHHHHH
Confidence 999999999987764 1247864 6899999999999999999887654 49999 9999999999
Q ss_pred HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEe
Q 007300 241 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 320 (609)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 320 (609)
+.+++..++. .++|+|+|+|+..++|.++...+..++++..+... +.+. ....+++++.++..||.|++
T Consensus 143 ~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~v~t 211 (473)
T TIGR02095 143 PALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADRVTT 211 (473)
T ss_pred HHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCcCee
Confidence 9999876421 14899999999999998887666666666443221 1111 11357899999999999999
Q ss_pred eCHHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 321 VSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 321 vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
||+.+++++.. ..+|..++.++ +..++.+|+||+|.+.|+|..++++..+|+..++ ..+...+..+++++|++.++
T Consensus 212 VS~~~~~ei~~-~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~ 289 (473)
T TIGR02095 212 VSPTYAREILT-PEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPVDD 289 (473)
T ss_pred cCHhHHHHhcC-CcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCccC
Confidence 99999999985 23444433322 2458999999999999999999899999998765 46777788999999999866
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
+.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+...++.+.++.++++||++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~ 369 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFI 369 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEE
Confidence 78999999999999999999999999987789999999998778889999998888888888899999888999999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC------cceeEecccccccccCCCCCHHHHHHHHHHHHHhh-
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY- 551 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~- 551 (609)
++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.+++..+
T Consensus 370 l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~~~ 439 (473)
T TIGR02095 370 LMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRLYR 439 (473)
T ss_pred EeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998 899987 9999999999999998833
Q ss_pred -CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007300 552 -GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 552 -~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
+++.+.+|+++++.++|||+.++++|+++|+++
T Consensus 440 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 440 QDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred cCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 267889999999989999999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-62 Score=555.03 Aligned_cols=435 Identities=33% Similarity=0.560 Sum_probs=364.8
Q ss_pred cccccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEE
Q 007300 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (609)
Q Consensus 77 ~~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (609)
+.+...++|||+||+.+++|+.++||+++++..|+++|+++||+|.||+|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 34444567999999999999999999999999999999999999999999998754322111111122222223567888
Q ss_pred eeEcCeeEEEEeCc-chhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccc
Q 007300 157 CHKRGVDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDW 235 (609)
Q Consensus 157 ~~~~gv~~~~v~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~ 235 (609)
...+||++++++++ .++.+ ..+|+ |.|+..||.+||++++++++...+ +|||| |+|||
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~--------~PDII-HaHDW 718 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF--------HPDII-HCHDW 718 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC--------CCCEE-EECCC
Confidence 88899999999976 35554 35675 789999999999999999987654 49999 99999
Q ss_pred ccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcC
Q 007300 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 315 (609)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 315 (609)
++++++.+++..++..+ +.++|+|+|+|++.++ .+.++.++..|
T Consensus 719 ~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~-----------------------------------~n~lk~~l~~A 762 (1036)
T PLN02316 719 SSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFG-----------------------------------ANHIGKAMAYA 762 (1036)
T ss_pred hHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccc-----------------------------------hhHHHHHHHHC
Confidence 99999999988764433 3678999999986542 13456788999
Q ss_pred CEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCC
Q 007300 316 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 395 (609)
Q Consensus 316 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 395 (609)
|.|++||+.+++++... ..+.. +..++.+|+||||++.|+|.++++++.+|+..++..+|...+..+|+++|++
T Consensus 763 D~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~ 836 (1036)
T PLN02316 763 DKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK 836 (1036)
T ss_pred CEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC
Confidence 99999999999999852 12211 1238999999999999999999999999999998888999999999999998
Q ss_pred CCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHhC----CCceEEEeecChHHHHH
Q 007300 396 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLAHM 470 (609)
Q Consensus 396 ~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~----~~~v~~~~~~~~~~~~~ 470 (609)
. .+.|+|+|+|||.++||++.|++|++.+.+.+++|+|+|+|+ ..+++.+++++.++ ++++.+.+.++..+.+.
T Consensus 837 ~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~ 915 (1036)
T PLN02316 837 Q-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHL 915 (1036)
T ss_pred c-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHH
Confidence 3 356999999999999999999999999877789999999985 34677777777743 56788888888888888
Q ss_pred HHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC-------------cceeEecccccccccCCCCCH
Q 007300 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPVDV 537 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~-------------~~G~l~~~~~~~~~~v~~~d~ 537 (609)
+|++||++|+||++|+||++++|||+||+|||++++||++|+|.++ .|||+| ++.|+
T Consensus 916 iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~d~ 985 (1036)
T PLN02316 916 IYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGADA 985 (1036)
T ss_pred HHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCCCH
Confidence 9999999999999999999999999999999999999999999884 699988 99999
Q ss_pred HHHHHHHHHHHHhh-C-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 538 AAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 538 ~~la~~I~~ll~~~-~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++++.+|.+++..+ + ...+.++++++|.++|||+.++++|+++|+++.
T Consensus 986 ~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 986 AGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999874 2 355688999999999999999999999999875
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-62 Score=531.54 Aligned_cols=453 Identities=41% Similarity=0.674 Sum_probs=376.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCc-eEEEEEeCCEEeeEEEEEe--eEcC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-VVIELKVGDKIEKVRFFHC--HKRG 161 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~g 161 (609)
|||+||+.+++|+.++||+++++.+|+++|+++||+|+|++|.|+...+..... ..... ...+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 899999999999999999999999999999999999999999998765432111 11111 12344433 4589
Q ss_pred eeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHH
Q 007300 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIP 241 (609)
Q Consensus 162 v~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~ 241 (609)
|++++++++.++.+ ..+|+ |.++..||.+||++++++++.++. +|||| |+|+|++++++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~--------~pDii-H~h~w~~~~~~ 133 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP--------RPDIV-HAHDWHTGLIP 133 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC--------CCceE-EECCcHHHHHH
Confidence 99999999888776 46775 788999999999999999887654 49999 99999999999
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEee
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 321 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 321 (609)
.+++..+ .. .+.++|+|+|+|+..++|.++...+..++++..+.. .+... ....+++++.++..||.|+++
T Consensus 134 ~~l~~~~-~~-~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 134 ALLKEKY-WR-GYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred HHHHHhh-hc-cCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcCeee
Confidence 9998765 22 235799999999999999887766666666654321 11110 113468899999999999999
Q ss_pred CHHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 322 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 322 S~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+...|+..++ +++...+..+++++|++. ++
T Consensus 205 S~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~-~~ 281 (466)
T PRK00654 205 SPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD-DD 281 (466)
T ss_pred CHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC-CC
Confidence 9999999875 22332222222 2348999999999999999988888889998875 577888899999999983 35
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.++|+|+||+.++||++.|++|++++.+++++|+|+|+|++.+++.++++..+++.++.+...++.++++.+|++||++|
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v 361 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFL 361 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEE
Confidence 68999999999999999999999999777899999999987788899999998887777777888888888999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC------cceeEecccccccccCCCCCHHHHHHHHHHHHHhhC-
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG- 552 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~- 552 (609)
+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.+.
T Consensus 362 ~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~~~ 431 (466)
T PRK00654 362 MPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELYRQ 431 (466)
T ss_pred eCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999988 899987 99999999999999987442
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 432 ~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 432 PPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 5668889999988999999999999999998864
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-58 Score=509.67 Aligned_cols=462 Identities=44% Similarity=0.739 Sum_probs=386.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceE----EEEEeCCEEeeEEEEEeeEcC
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (609)
||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.+..... +.+...+....+++++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 7999999999999999999999999999999999999999999987765433222 234456667788889988999
Q ss_pred eeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHH
Q 007300 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIP 241 (609)
Q Consensus 162 v~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~ 241 (609)
|++++++++.+..+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +|||| |+|||++++++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~--------~pDvi-H~hd~~t~~~~ 144 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW--------KPDII-HCHDWHTGLVP 144 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC--------CCcEE-EECchHHHHHH
Confidence 99999999988775 3344 444556899999999999999999887643 59999 99999999999
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEee
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 321 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 321 (609)
.+++..+.. ..+.++|+|+|+|++.+++.++...+...+.+..... ..+ .......+++++.++..||.|+++
T Consensus 145 ~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~ad~v~~v 217 (476)
T cd03791 145 ALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELF---HID---GLEFYGQVNFLKAGIVYADAVTTV 217 (476)
T ss_pred HHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchh---hhc---ccccCCcccHHHHHHHhcCcCeec
Confidence 999877543 2346899999999999999877655544433221000 001 111234568899999999999999
Q ss_pred CHHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 322 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 322 S~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
|+.+++++.+ ..+|..++..+ +..++.+|+||+|.+.|.|..++.+...|+.+ ....+...+..+++++|++.+++
T Consensus 218 S~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~~~~ 295 (476)
T cd03791 218 SPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPVDPD 295 (476)
T ss_pred CHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCcCCC
Confidence 9999999875 22333333333 23599999999999999999888888888854 44688888999999999986678
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|.+.+++.++++..++++++.++..++.+.++.++++||+++
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l 375 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFL 375 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEE
Confidence 89999999999999999999999999877799999999987788899999888777888888999888889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCc------ceeEecccccccccCCCCCHHHHHHHHHHHHHhhC-
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG- 552 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~------~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~- 552 (609)
+||++|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.+.
T Consensus 376 ~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~~~ 445 (476)
T cd03791 376 MPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALYRD 445 (476)
T ss_pred CCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999988 99987 99999999999999987653
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
++.+.+++++++.+.|||+.++++|+++|+
T Consensus 446 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 446 PEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 578899999999999999999999999996
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=493.84 Aligned_cols=465 Identities=39% Similarity=0.618 Sum_probs=400.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCc----eEEEEEeCCEEeeEEEEEeeEc
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (609)
|||++++.++.|..|+||++++++.|+++|++.||+|.|+.|.|+...+.|... ....+..+.........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777766553 2233334443333333333333
Q ss_pred C-eeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccch
Q 007300 161 G-VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSL 239 (609)
Q Consensus 161 g-v~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~ 239 (609)
| ++.++++++.++++- +...| +|.|+..||..|++++++.+...... ..|||| |+||||+++
T Consensus 81 ~~v~~~lid~~~~f~r~----~~~~~------~~~d~~~Rf~~F~~a~~~~~~~~~~~------~~pDIv-H~hDWqt~L 143 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----DSTLY------GYYDNAERFAFFSLAAAELAPLGLIS------WLPDIV-HAHDWQTGL 143 (487)
T ss_pred CCCcEEEecChhhcCcc----ccccC------CCCcHHHHHHHHHHHHHHHhhhcCCC------CCCCEE-EeecHHHHH
Confidence 3 999999988887751 12333 49999999999999999998665410 149999 999999999
Q ss_pred HHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEE
Q 007300 240 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 319 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 319 (609)
+|.+++..+. -+..+|.|||+||+.+||.|+......+++|..+.. ......+ ...+++|.++..||.|.
T Consensus 144 ~~~~lk~~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~-~~~l~~~------~~~~~lK~gi~~ad~vt 213 (487)
T COG0297 144 LPAYLKQRYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYA-SFGLEFY------GQISFLKGGLYYADAVT 213 (487)
T ss_pred HHHHHhhccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhh-hceeeec------CcchhhhhhheeccEEE
Confidence 9999998641 126899999999999999999777788999976655 2222222 34799999999999999
Q ss_pred eeCHHHHHHHhcccCCCccchhhhcc--CCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCC
Q 007300 320 TVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 397 (609)
Q Consensus 320 ~vS~~~~~~l~~~~~~g~~~~~~~~~--~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 397 (609)
+||+.+++++. ...+|...+..++. .+++.|.||+|...|+|.+++++..+|+..+.. ++..++..++.++|++.+
T Consensus 214 tVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~~~ 291 (487)
T COG0297 214 TVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLDVD 291 (487)
T ss_pred EECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCCCC
Confidence 99999999999 46787777776643 589999999999999999999999999999875 699999999999999998
Q ss_pred CCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcE
Q 007300 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
.+.|++.++||+..|||+|.+++++..+.+..++++++|.|+..++..+..++..+++++.....|+.+..+.+++++|+
T Consensus 292 ~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~ 371 (487)
T COG0297 292 LPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADV 371 (487)
T ss_pred CCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCE
Confidence 88899999999999999999999999999888999999999989999999999999998999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc--------CcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--------~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
+++||++||||+++++||++|+++|+..+||++|+|.+ ..|||+| .+.++++++.+|.+++.
T Consensus 372 ~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA~~ 441 (487)
T COG0297 372 ILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRALV 441 (487)
T ss_pred EEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986 5799998 88899999999999988
Q ss_pred hhCH-HH-HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 550 TYGT-QA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 550 ~~~~-~~-~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
-+.. +. ++.+.+++|..+|||+..+++|.++|+.++...
T Consensus 442 ~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 442 LYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred HhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhccc
Confidence 7643 44 888999999999999999999999999998643
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=361.93 Aligned_cols=474 Identities=19% Similarity=0.248 Sum_probs=366.7
Q ss_pred EEEEEeecC-----CccccchHHHHhhchhHHHHhCCCeEEEEeecCCC-c-c-----c--------cCC-------C--
Q 007300 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-K-----D--------AWD-------T-- 137 (609)
Q Consensus 87 Il~vs~~~~-----P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~-~-~-----~--------~~~-------~-- 137 (609)
|++++.||. | ...||+|+..+...++++..|.....++..|.+ + . + .|+ .
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 456666654 4 357999999999999999999999999987752 1 1 1 121 1
Q ss_pred -----ceEEEEEeCCEEeeEEEEEeeEcCeeEEEEeCcchhhhhcCCCCC-eeccCCCCCCCcchHHHHHHHHHHHHHhh
Q 007300 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAP 211 (609)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~r~~~~~~~~~~~~ 211 (609)
...+.+.+.++...++.++...+++++++++++......+.+..+ .+|++ |...+..++.+|+.++++.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 124677777888899999988889999999988622222323332 46763 24556666699999999999
Q ss_pred hhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCc-----c--cCceEEEEEecCccCCc--ccccccc----
Q 007300 212 RILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFG---- 278 (609)
Q Consensus 212 ~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~~--~~~~~~~---- 278 (609)
+.+++. |||| |+||||+++++.++.+.....+. + ...+++||+|++.+||. |+...+.
T Consensus 156 ~~l~~~--------pdvi-H~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~ 226 (601)
T TIGR02094 156 RALGID--------PDVY-HLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFG 226 (601)
T ss_pred HHcCCC--------ceEE-EeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhh
Confidence 887654 9999 99999999999987543211110 1 25789999999999997 8876663
Q ss_pred ----ccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhh--ccCCeeEec
Q 007300 279 ----LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIV 352 (609)
Q Consensus 279 ----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~ 352 (609)
.++++..+...... ..+-....+++++.++..||.|.+||+.+.+..... ++ .....+ +..++..|.
T Consensus 227 ~~~~~~gl~~~~~~~~~~----~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~-~l~~~~~~~~~~i~gIt 299 (601)
T TIGR02094 227 DYAANLGLPREQLLALGR----ENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQ-FLYPGYEEEEVPIGYVT 299 (601)
T ss_pred hhhhHhCCCHHHHHhhhh----hccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HH-hhhhhcccccCCcccee
Confidence 35666544332211 100001357999999999999999999999843320 11 000111 123689999
Q ss_pred CCCCCCCcCCCCccccccccCcch---------------------hcccchHHHHHHHH---------------------
Q 007300 353 NGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA--------------------- 390 (609)
Q Consensus 353 nGvd~~~~~p~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~--------------------- 390 (609)
||||...|.|.+++.|..+|+.++ +..+|..+|.+|++
T Consensus 300 NGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 379 (601)
T TIGR02094 300 NGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILM 379 (601)
T ss_pred CCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhh
Confidence 999999999999999999999877 34789999999988
Q ss_pred HhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCChh------hHHHHHHHHHh--CCCc
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YPEK 456 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~--~~~~ 456 (609)
++|++.+++.+++++++|+.++||++++++++.++.+ .+++|||+|++.+. +++.+.+++.+ ++++
T Consensus 380 ~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~k 459 (601)
T TIGR02094 380 ATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGR 459 (601)
T ss_pred hhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCC
Confidence 5888888999999999999999999999999988853 47999999998854 89999999988 8889
Q ss_pred eEEEeecChHHHHHHHHhCcEEEe-cCC-CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecc--cccccccC
Q 007300 457 ARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS--FSVDCEAV 532 (609)
Q Consensus 457 v~~~~~~~~~~~~~~l~~aDv~v~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~--~~~~~~~v 532 (609)
+.+...|+..+++.++++||++++ ||+ +|+||++.+-||..|.+.+++--|...|.. ++.|||.||. ...+.+..
T Consensus 460 v~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~ 538 (601)
T TIGR02094 460 IVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQ 538 (601)
T ss_pred EEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccc
Confidence 999999999999999999999999 999 999999999999999999999989888877 5689999962 11122334
Q ss_pred CCCCHHHHHHHHHHHH-Hhh-C------HHHHHHHHHHHHHh---hCCchHHHHHHHHHHH
Q 007300 533 DPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 582 (609)
Q Consensus 533 ~~~d~~~la~~I~~ll-~~~-~------~~~~~~~~~~~~~~---~fs~~~~a~~~~~~~~ 582 (609)
|..|+++|.++|++.+ .-+ + ++.+.++.+++|.. .|||++++++|.+.|.
T Consensus 539 d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 539 DRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 5789999999998876 322 1 34699999999988 7999999999999873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=349.35 Aligned_cols=396 Identities=18% Similarity=0.184 Sum_probs=276.0
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|+..|+|. .||++.++.+|+++|.++||+|+|+|+... ++. |..... .......++..+|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~-~~~-~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPY-YPQ-WRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCC-CCC-CCCCcc--------cccccceeeecCCeEE
Confidence 8999999998886 799999999999999999999999997621 111 110000 0001122233567888
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHh-hhhhccCCCCCCCCCCceEEEeccccc--chHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYDVVFVANDWHT--SLIP 241 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~pDvV~h~h~~~~--~~~~ 241 (609)
+++....... .. .......+..|....... .+... .+||+| |+|.+.. ....
T Consensus 69 ~r~~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Div-~~~~p~~~~~~~~ 123 (412)
T PRK10307 69 WRCPLYVPKQ---------PS-------GLKRLLHLGSFALSSFFPLLAQRR--------WRPDRV-IGVVPTLFCAPGA 123 (412)
T ss_pred EEccccCCCC---------cc-------HHHHHHHHHHHHHHHHHHHhhccC--------CCCCEE-EEeCCcHHHHHHH
Confidence 7764311000 00 001111222222222222 22211 169999 9986433 2233
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCc-cccccccccccCCCCCcCCchhHHHHHHhhcCCEEEe
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 320 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 320 (609)
..+++. .++|+++++|+..++..+. .+.. ..+ +......+++..++.+|.+++
T Consensus 124 ~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~ad~ii~ 177 (412)
T PRK10307 124 RLLARL-------SGARTWLHIQDYEVDAAFG------LGLLKGGK-------------VARLATAFERSLLRRFDNVST 177 (412)
T ss_pred HHHHHh-------hCCCEEEEeccCCHHHHHH------hCCccCcH-------------HHHHHHHHHHHHHhhCCEEEe
Confidence 344443 5789999999754321111 0100 000 000112356777889999999
Q ss_pred eCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCC
Q 007300 321 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 400 (609)
Q Consensus 321 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 400 (609)
+|+..++.+.+ .+.+.+ ++.+||||+|.+.|.|.... ....++++++++. +.
T Consensus 178 ~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~--~~ 229 (412)
T PRK10307 178 ISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD--GK 229 (412)
T ss_pred cCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC--CC
Confidence 99999999886 455444 89999999999888764321 1345677888764 44
Q ss_pred cEEEEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCC-CceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
++|+|+|++.+.||++.|++|++++.+ ++++|+|+|+|+ ..+.++++...++ .++.+.+..+.+++..+++.||++
T Consensus 230 ~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~ 307 (412)
T PRK10307 230 KIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCH 307 (412)
T ss_pred EEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEe
Confidence 899999999999999999999998865 679999999998 5666777666543 357777767888888999999999
Q ss_pred EecCCCCC----CcHHHHHHHHcCCceEEcCCCC--cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 479 LIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 479 v~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
++||..|+ +|.+++|||+||+|||+|+.+| +.+++. .+|+++ +++|+++++++|.+++++
T Consensus 308 v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~-- 373 (412)
T PRK10307 308 LLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ-- 373 (412)
T ss_pred EEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 99999998 5778999999999999999877 457777 589987 999999999999999987
Q ss_pred HHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 553 TQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 553 ~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
++.+.+|++++ +.+.|||+.++++|+++|++++.+
T Consensus 374 ~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 374 ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 55555565554 567899999999999999998754
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=368.16 Aligned_cols=446 Identities=17% Similarity=0.136 Sum_probs=287.6
Q ss_pred CCCceEEEEEeecCC---------ccccchHHHHhhchhHHHHhCC--CeEEEEeecCCCccccCCCceEEEEEeCCE-E
Q 007300 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P---------~~~~GG~~~~~~~La~aL~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (609)
.++|.|++|+..-.| ...+||...++.+|+++|+++| |+|+|+|.......-.|+.....+.. ..+ .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 467999999864322 2358999999999999999999 99999997744211112111111110 000 0
Q ss_pred eeEEEEEeeEcCeeEEEEeCcc---hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhh----ccCCCCCC
Q 007300 150 EKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL----NLNSNKYF 222 (609)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~---~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~ 222 (609)
+.........+|+.++++.... ++.| ..-+.....|...+++.++.+ ..+-..-.
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~ 307 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGH 307 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccc
Confidence 0000111123577777775321 2232 111223344555555544321 10000000
Q ss_pred CCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCC-ccccccccccccCCCCCcC
Q 007300 223 SGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSSFDFIDGYNKPVR 301 (609)
Q Consensus 223 ~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 301 (609)
...|||| |+|+|..+.++..++.. .++|+|+|.|.+.-... ......+. +..-. .+.|. .
T Consensus 308 ~~~pDvI-HaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~K~---~~ll~~g~~~~~~~-----~~~y~---~ 368 (1050)
T TIGR02468 308 PVWPYVI-HGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRDKL---EQLLKQGRMSKEEI-----NSTYK---I 368 (1050)
T ss_pred CCCCCEE-EECcchHHHHHHHHHHh-------hCCCEEEECccchhhhh---hhhccccccccccc-----ccccc---h
Confidence 0138999 99999999999999886 59999999997532110 00000000 00000 00000 1
Q ss_pred CchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccch--hh----h---------ccCCeeEecCCCCCCCcCCCCcc
Q 007300 302 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD--NI----I---------RKTGIKGIVNGMDVQEWNPLTDK 366 (609)
Q Consensus 302 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~--~~----~---------~~~~i~vI~nGvd~~~~~p~~~~ 366 (609)
...+..+...+..||.||++|+...+++...+. +.++. .. + ...++.|||||||+..|.|....
T Consensus 369 ~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~ 447 (1050)
T TIGR02468 369 MRRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGD 447 (1050)
T ss_pred HHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCcc
Confidence 134566788899999999999999987665321 11110 00 0 01289999999999999885321
Q ss_pred ccccccCcchh------cccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc----CCeEEEEEe
Q 007300 367 YIGVKYDASTV------MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLG 436 (609)
Q Consensus 367 ~~~~~~~~~~~------~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~----~~~~lvivG 436 (609)
. +.... ....+.....+++.+. ++++|+|+|+||+.++||++.|++|+..+.. +++. +|+|
T Consensus 448 ~-----~~~~~~~~~~~~~~~~~~~~~l~r~~~---~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG 518 (1050)
T TIGR02468 448 M-----DGETEGNEEHPAKPDPPIWSEIMRFFT---NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMG 518 (1050)
T ss_pred c-----cchhcccccccccccchhhHHHHhhcc---cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEe
Confidence 0 00000 0000011123333332 2366899999999999999999999999853 3565 4668
Q ss_pred CCCh---------hhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhC----cEEEecCCCCCCcHHHHHHHHcCCce
Q 007300 437 TGKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVP 501 (609)
Q Consensus 437 ~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a----Dv~v~pS~~E~~gl~~lEAma~G~Pv 501 (609)
+++. .+...+.++..+++ ++|.+.+..+.++++.+|+.| |+||+||.+|+||++++|||+||+||
T Consensus 519 ~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPV 598 (1050)
T TIGR02468 519 NRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPM 598 (1050)
T ss_pred cCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCE
Confidence 7642 12345666666554 456665555777888899887 69999999999999999999999999
Q ss_pred EEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHH
Q 007300 502 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEE 579 (609)
Q Consensus 502 I~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~ 579 (609)
|+|+.||+.|+|.++.+|+++ +|.|+++|+++|.+++++ ++.+.+|++++. .++|||+.++++|++
T Consensus 599 VASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~ 666 (1050)
T TIGR02468 599 VATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLS 666 (1050)
T ss_pred EEeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 999999999999999999987 999999999999999998 666777776653 467999999999999
Q ss_pred HHHHHHHc
Q 007300 580 TLLNLEVA 587 (609)
Q Consensus 580 ~~~~l~~~ 587 (609)
.|..+...
T Consensus 667 ~i~~~~~~ 674 (1050)
T TIGR02468 667 RIASCRPR 674 (1050)
T ss_pred HHHHHhcc
Confidence 99988754
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=346.86 Aligned_cols=386 Identities=20% Similarity=0.274 Sum_probs=273.7
Q ss_pred EEEEEeecCCcc-----ccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcC
Q 007300 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (609)
Q Consensus 87 Il~vs~~~~P~~-----~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (609)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 566776666642 259999999999999999999999999763311110 0012346
Q ss_pred eeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHH-HHHHHHHHHH-HhhhhhccCCCCCCCCCCceEEEecccccch
Q 007300 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAAL-EAPRILNLNSNKYFSGPYDVVFVANDWHTSL 239 (609)
Q Consensus 162 v~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~ 239 (609)
++++.+....+... ...... .+..|....+ ..++... .+||+| |+|.|..+.
T Consensus 61 ~~v~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Dii-h~h~~~~~~ 114 (405)
T TIGR03449 61 VRVRNVVAGPYEGL-----------------DKEDLPTQLCAFTGGVLRAEARHEP--------GYYDLI-HSHYWLSGQ 114 (405)
T ss_pred cEEEEecCCCcccC-----------------CHHHHHHHHHHHHHHHHHHHhhccC--------CCCCeE-EechHHHHH
Confidence 66665532221100 000011 1112222222 2222221 259999 999988777
Q ss_pred HHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEE
Q 007300 240 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 319 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 319 (609)
++.+++.. .++|+|+++|+..... ...+.....+. ......+.+..+..+|.++
T Consensus 115 ~~~~~~~~-------~~~p~v~t~h~~~~~~---~~~~~~~~~~~----------------~~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 115 VGWLLRDR-------WGVPLVHTAHTLAAVK---NAALADGDTPE----------------PEARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHHHHHHh-------cCCCEEEeccchHHHH---HHhccCCCCCc----------------hHHHHHHHHHHHHhcCeEE
Confidence 76666654 5889999999753200 00000000000 0011223466788999999
Q ss_pred eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 320 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 320 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
++|+...+.+... ++.+.+ ++.+|+||+|.+.|.|.. +...+.+++++. +
T Consensus 169 ~~s~~~~~~~~~~--~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~--~ 218 (405)
T TIGR03449 169 ANTDEEARDLVRH--YDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL--D 218 (405)
T ss_pred ECCHHHHHHHHHH--cCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC--C
Confidence 9999988887642 454433 899999999998886642 345677788764 4
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhccc--CC--eEEEEEeCCC--h-hhHHHHHHHHHhCC--CceEEEeecChHHHHH
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPLAHM 470 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~--~~lvivG~g~--~-~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ 470 (609)
.++|+|+||+.+.||++.+++|++++.+ ++ ++|+|+|++. . ...+.++++..+.+ +++.+.+..+.+++..
T Consensus 219 ~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 298 (405)
T TIGR03449 219 TKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVH 298 (405)
T ss_pred CcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHH
Confidence 5899999999999999999999999854 44 9999999642 1 34566777766654 4577777667788889
Q ss_pred HHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 299 ~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 299 VYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLLDD 368 (405)
T ss_pred HHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999986 899999999999999987
Q ss_pred hCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 551 ~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++.+.+|++++. .++|||+.++++|+++|.+++.
T Consensus 369 --~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 369 --PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred --HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 556666665543 4689999999999999998763
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=343.65 Aligned_cols=364 Identities=19% Similarity=0.231 Sum_probs=259.8
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+..|.|. .||.+.++.+|+++|+++||+|.|+|+.++..... +...+|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999997 89999999999999999999999999864321110 0112355555
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH--H
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC--Y 243 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~--~ 243 (609)
.+....+... ... . ++..+...+.+.++.. +|||| |+|++....... .
T Consensus 58 ~~p~~~~~~~-------~~~--------~----~~~~~~~~l~~~~~~~----------~~DiI-h~~~~~~~~~~~~~~ 107 (398)
T cd03796 58 YLPFVVFYNQ-------STL--------P----TFFGTFPLLRNILIRE----------RITIV-HGHQAFSALAHEALL 107 (398)
T ss_pred EecceeccCC-------ccc--------c----chhhhHHHHHHHHHhc----------CCCEE-EECCCCchHHHHHHH
Confidence 5532111100 000 0 0111112222222222 59999 999866554322 2
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+.+. .++|+|++.|+... .. +.. . .....+++..++.+|.++++|+
T Consensus 108 ~~~~-------~~~~~v~t~h~~~~-----~~--------~~~-~-------------~~~~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 108 HART-------MGLKTVFTDHSLFG-----FA--------DAS-S-------------IHTNKLLRFSLADVDHVICVSH 153 (398)
T ss_pred Hhhh-------cCCcEEEEeccccc-----cc--------chh-h-------------HHhhHHHHHhhccCCEEEEecH
Confidence 2222 58999999996421 00 000 0 0011344666789999999999
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
...+.+... .+++.+ ++.+||||+|.+.|.|...+ .+++.++|
T Consensus 154 ~~~~~~~~~--~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~~i 196 (398)
T cd03796 154 TSKENTVLR--ASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKITI 196 (398)
T ss_pred hHhhHHHHH--hCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCceEE
Confidence 998865421 333333 89999999999888765321 12355899
Q ss_pred EEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEE
Q 007300 404 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
+|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+..+.+++..+|+.||+++
T Consensus 197 ~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v 274 (398)
T cd03796 197 VVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFL 274 (398)
T ss_pred EEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999999999999998864 689999999987 4556666666543 4677777778888889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHH-HHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAE 558 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~-~~~~ 558 (609)
+||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|+++++++|.+++++.... ...+
T Consensus 275 ~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~~~~ 342 (398)
T cd03796 275 NTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKHDPW 342 (398)
T ss_pred eCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhhHHH
Confidence 99999999999999999999999999999999998864433 4558999999999999863222 2334
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 559 MMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 559 ~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+++.+.++|||+.++++|+++|++++..
T Consensus 343 ~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 343 SFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 44555789999999999999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=346.23 Aligned_cols=390 Identities=19% Similarity=0.193 Sum_probs=255.4
Q ss_pred ccchHHHHhhchhHHHHhCCC--eEEEEeecCCCcc--ccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEEEEeCcchhh
Q 007300 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (609)
Q Consensus 99 ~~GG~~~~~~~La~aL~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~ 174 (609)
..||+++++.+|+++|+++|| +|+|+|..++... ..+ ...++...+|++++.+.....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~----------------~~~~~~~~~gv~v~r~~~~~~-- 85 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDY----------------AQPIERIAPGARIVRLPFGPR-- 85 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCcc----------------CCCeeEeCCCcEEEEecCCCC--
Confidence 389999999999999999997 9999997643210 000 001123346788877743110
Q ss_pred hhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcc
Q 007300 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMY 254 (609)
Q Consensus 175 ~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~ 254 (609)
.+.. ..+-...+..+...+.+.++.... +|||| |+|.|..+++...++..
T Consensus 86 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~--------~~DvI-H~h~~~~~~~~~~~~~~------- 135 (439)
T TIGR02472 86 ---------RYLR-----KELLWPYLDELADNLLQHLRQQGH--------LPDLI-HAHYADAGYVGARLSRL------- 135 (439)
T ss_pred ---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcCC--------CCCEE-EEcchhHHHHHHHHHHH-------
Confidence 0000 000001112344445555543221 49999 99998877777666654
Q ss_pred cCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCc-CCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc
Q 007300 255 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPV-RGRKINWMKAGILESDMVLTVSPHYAQELVSGE 333 (609)
Q Consensus 255 ~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~ 333 (609)
.++|+|+|.|+...... ..+...++.... +.+.+ ....+.+++..++.+|.|+++|+...+.... .
T Consensus 136 ~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-~ 202 (439)
T TIGR02472 136 LGVPLIFTGHSLGREKR---RRLLAAGLKPQQ---------IEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYA-L 202 (439)
T ss_pred hCCCEEEecccccchhh---hhcccCCCChhh---------hhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-h
Confidence 58899999997432100 000000000000 00000 0112345677899999999999765443321 1
Q ss_pred CCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEecccccc
Q 007300 334 DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 413 (609)
Q Consensus 334 ~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~K 413 (609)
..+++++ ++.+||||+|.+.|.|.... ......+..+ ++++.+ ++.++|+|+||+.+.|
T Consensus 203 ~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~K 261 (439)
T TIGR02472 203 YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDRRK 261 (439)
T ss_pred ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCcccC
Confidence 1244444 89999999999988775321 0001112222 233333 2457999999999999
Q ss_pred CHHHHHHHHhhccc--CCeEEE-EEeCCCh--hh-------HHHHHHHHHhC--CCceEEEeecChHHHHHHHHhC----
Q 007300 414 GSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGA---- 475 (609)
Q Consensus 414 g~~~ll~a~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~a---- 475 (609)
|++.|++|+..+.. .+.+++ |+|+|+. .+ .+.+.++..+. .+++.+.+..+.++++.+|+.|
T Consensus 262 g~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 262 NIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSR 341 (439)
T ss_pred CHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhcC
Confidence 99999999986422 234444 5687652 11 12233444443 3556666656778888899877
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 555 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 555 (609)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++++++|.+++++ ++.
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~ 409 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--SSQ 409 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--HHH
Confidence 99999999999999999999999999999999999999999999987 999999999999999998 555
Q ss_pred HHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007300 556 LAEMMKNG---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 556 ~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 582 (609)
+.+|++++ +.++|||+.++++|+++++
T Consensus 410 ~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 410 WQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 55555554 5789999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=339.05 Aligned_cols=373 Identities=22% Similarity=0.276 Sum_probs=266.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|+..|+|. ..||.+.++.+|+++|.++ |+|.|++...... ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998874 4599999999999999987 7888887642210 1223444
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.+..+..... +..... .+..... .. .... ++|+| |+|.|...+.+..+
T Consensus 53 ~~~~~~~~~~~-----------------~~~~~~---~~~~~~~-~~--~~~~-------~~div-h~~~~~~~~~~~~~ 101 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKALG---TFSVDLA-MA--NDPV-------DADVV-HSHTWYTFLAGHLA 101 (388)
T ss_pred EEecChhhccc-----------------hhhhhh---hhhHHHH-Hh--hCCC-------CCCeE-eecchhhhhHHHHH
Confidence 33321110000 000000 1111111 11 1111 48999 99998777655554
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+.. .++|+++++|+..+...+....+ + .++ .....+.+..+..+|.++++|+.
T Consensus 102 ~~~-------~~~p~v~~~h~~~~~~~~~~~~~---~------------~~~-----~~~~~~~~~~~~~ad~vi~~S~~ 154 (388)
T TIGR02149 102 KKL-------YDKPLVVTAHSLEPLRPWKEEQL---G------------GGY-----KLSSWAEKTAIEAADRVIAVSGG 154 (388)
T ss_pred HHh-------cCCCEEEEeeccccccccccccc---c------------cch-----hHHHHHHHHHHhhCCEEEEccHH
Confidence 433 58999999997643211110000 0 000 01123456778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
+++.+.+.. .++..+ ++.+||||+|...|.|.. +..++++++++. +.++|+
T Consensus 155 ~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~i~ 205 (388)
T TIGR02149 155 MREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRPYIL 205 (388)
T ss_pred HHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--CceEEE
Confidence 999887521 133333 899999999998887642 455778888764 458999
Q ss_pred EEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHhCCC---ceEEEe-ecChHHHHHHHHhCcEE
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGADFI 478 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~~l~~aDv~ 478 (609)
|+||+.+.||++.|++|++++. ++++++++|+|. +.+.+.++++...++. ++.++. ..+.+++..+|+.||++
T Consensus 206 ~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~ 284 (388)
T TIGR02149 206 FVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVF 284 (388)
T ss_pred EEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEE
Confidence 9999999999999999999985 478899988765 3345666666554432 355544 35778888999999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCH------HHHHHHHHHHHHhhC
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALATYG 552 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~------~~la~~I~~ll~~~~ 552 (609)
++||.+|+||++++|||++|+|||+|+.||..|++.++.+|+++ +++|+ ++++++|.+++++
T Consensus 285 v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~~-- 352 (388)
T TIGR02149 285 VCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLAD-- 352 (388)
T ss_pred EeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHhC--
Confidence 99999999999999999999999999999999999999999987 88888 9999999999987
Q ss_pred HHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 553 ~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++.+.+|++++ ..++|||+.+++++.++|++++
T Consensus 353 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 353 PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 66666666655 4688999999999999999863
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=345.95 Aligned_cols=375 Identities=18% Similarity=0.230 Sum_probs=264.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (609)
+++|||+++.... |....||++.++.+|+++|.++||+|+++|+.... .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 6789999998543 33457999999999999999999999999986321 110 012
Q ss_pred eeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchH-
Q 007300 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI- 240 (609)
Q Consensus 162 v~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~- 240 (609)
+.++.+.... . ..|. .....+. +...+.+.++.. +|||| |+|.......
T Consensus 110 ~~v~~~~~~~-~---------~~~~--------~~~~~~~-~~~~l~~~i~~~----------kpDiI-h~~~~~~~~~~ 159 (465)
T PLN02871 110 AKVIGSWSFP-C---------PFYQ--------KVPLSLA-LSPRIISEVARF----------KPDLI-HASSPGIMVFG 159 (465)
T ss_pred ceeeccCCcC-C---------ccCC--------Cceeecc-CCHHHHHHHHhC----------CCCEE-EECCCchhHHH
Confidence 2221110000 0 0000 0000000 001222333333 59999 9987433322
Q ss_pred HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEe
Q 007300 241 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 320 (609)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 320 (609)
...+... .++|+|++.|+....- . ...... .+....+.+++...+.+|.+++
T Consensus 160 ~~~~ak~-------~~ip~V~~~h~~~~~~--~----~~~~~~---------------~~~~~~~~~~r~~~~~ad~ii~ 211 (465)
T PLN02871 160 ALFYAKL-------LCVPLVMSYHTHVPVY--I----PRYTFS---------------WLVKPMWDIIRFLHRAADLTLV 211 (465)
T ss_pred HHHHHHH-------hCCCEEEEEecCchhh--h----hcccch---------------hhHHHHHHHHHHHHhhCCEEEE
Confidence 2223332 5899999999642210 0 000000 0001122345667789999999
Q ss_pred eCHHHHHHHhcccCCCc-cchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 321 VSPHYAQELVSGEDKGV-ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 321 vS~~~~~~l~~~~~~g~-~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
+|+..++.+.+ .+. +.+ ++.+|+||+|.+.|.|... ...++.++... .++
T Consensus 212 ~S~~~~~~l~~---~~~~~~~------kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~-~~~ 262 (465)
T PLN02871 212 TSPALGKELEA---AGVTAAN------RIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG-EPE 262 (465)
T ss_pred CCHHHHHHHHH---cCCCCcC------eEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-CCC
Confidence 99999999986 232 222 8999999999998877532 12234444221 124
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.++|+|+||+.+.||++.++++++++ ++++|+|+|+|+ ..+.++++.... ++.+.+..+.+++..+|+.||++|
T Consensus 263 ~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~V 336 (465)
T PLN02871 263 KPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVFV 336 (465)
T ss_pred CeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEEE
Confidence 58999999999999999999999988 589999999987 667777776643 477777777788889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc---CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 556 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~---~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 556 (609)
+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ ++.+
T Consensus 337 ~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~~ 404 (465)
T PLN02871 337 MPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PELR 404 (465)
T ss_pred ECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHHH
Confidence 999999999999999999999999999999999999 9999987 999999999999999987 6666
Q ss_pred HHHHHHHH--HhhCCchHHHHHHHH-HHHHHHHc
Q 007300 557 AEMMKNGM--AQDLSWKGPAKKWEE-TLLNLEVA 587 (609)
Q Consensus 557 ~~~~~~~~--~~~fs~~~~a~~~~~-~~~~l~~~ 587 (609)
.+|++++. .++|||+.+++++++ .|++++..
T Consensus 405 ~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 405 ERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 66666552 468999999999998 79988864
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=348.66 Aligned_cols=428 Identities=15% Similarity=0.161 Sum_probs=271.0
Q ss_pred CceEEEEEeecC---Ccc----ccchHHHHhhchhHHH--------HhCCC----eEEEEeecCCCccccCCCceEEEEE
Q 007300 84 GLNILFVGTEVA---PWS----KTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (609)
Q Consensus 84 ~MkIl~vs~~~~---P~~----~~GG~~~~~~~La~aL--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~~ 144 (609)
.|||++||...+ |.. .+||...++.+|+++| +++|| +|.|+|...+.... .+..+.++..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~~ 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEKV 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-cccccccccc
Confidence 599999998762 211 3799999999999985 69999 77799976432111 0001111100
Q ss_pred eCCEEeeEEEEEeeEcCeeEEEEeCcc----hhhhhcCCCCCeeccCCCCCCCcchHH---HHHHHHHHHHHhhhhhccC
Q 007300 145 VGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPRILNLN 217 (609)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~v~~~~----~~~~~~~~~~~~~y~~~~~~~~~~~~~---r~~~~~~~~~~~~~~~~~~ 217 (609)
...+|+.++++.... .+.+ |..... ....|...+.+.++..
T Consensus 334 ------------~~~~~~~I~rvp~g~~~~~~~~~-----------------~i~k~~l~p~l~~f~~~~~~~~~~~--- 381 (784)
T TIGR02470 334 ------------YGTEHAWILRVPFRTENGIILRN-----------------WISRFEIWPYLETFAEDAEKEILAE--- 381 (784)
T ss_pred ------------cCCCceEEEEecCCCCccccccc-----------------ccCHHHHHHHHHHHHHHHHHHHHHh---
Confidence 011345554443211 0000 222222 1223444444433321
Q ss_pred CCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCC
Q 007300 218 SNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 297 (609)
Q Consensus 218 ~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 297 (609)
+.++||+| |+|.|..++++..++.. .++|.++|.|.+....... ..........++.
T Consensus 382 ----~~~~pDlI-Hahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~~~-~g~~~~~~e~~~~---------- 438 (784)
T TIGR02470 382 ----LQGKPDLI-IGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKYPD-SDIYWQEFEDKYH---------- 438 (784)
T ss_pred ----cCCCCCEE-EECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcccc-cccccccchhHHH----------
Confidence 12369999 99999999999888876 5999999999764321100 0000000000000
Q ss_pred CCcCCchhHHHHHHhhcCCEEEeeCHHHHH----HHh---cccCCCcc-ch----hh-hccCCeeEecCCCCCCCcCCCC
Q 007300 298 KPVRGRKINWMKAGILESDMVLTVSPHYAQ----ELV---SGEDKGVE-LD----NI-IRKTGIKGIVNGMDVQEWNPLT 364 (609)
Q Consensus 298 ~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~----~l~---~~~~~g~~-~~----~~-~~~~~i~vI~nGvd~~~~~p~~ 364 (609)
....+......+..||.||+.|..... .+. +...+.++ +. ++ ....++.+||+|+|...|.|.+
T Consensus 439 ---~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~ 515 (784)
T TIGR02470 439 ---FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYS 515 (784)
T ss_pred ---hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCC
Confidence 001122244678899999999975432 221 11111110 00 00 1234889999999999887754
Q ss_pred ccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh--
Q 007300 365 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-- 440 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~-- 440 (609)
.+.-... ....-.+....++.+.++.+|+..++++|+|+++||++++||++.|++|+.++.. ++++|+|+|++..
T Consensus 516 ~~~~r~~-~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 516 DKEKRLT-NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAK 594 (784)
T ss_pred chhhhhh-hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccc
Confidence 3100000 0000000011134455678888777788999999999999999999999987643 5799999998642
Q ss_pred --------hhHHHHHHHHHhCC--CceEEEeec-ChHHHHHHH---H-hCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 441 --------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 441 --------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~~l---~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
...+.+.++..+++ ++|.+.+.. +......++ + ++|++++||++|+||++++|||+||+|||+|+
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~ 674 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATR 674 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcC
Confidence 13356666777665 567665533 333333333 3 46899999999999999999999999999999
Q ss_pred CCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHHH---HhhCCchHHHHHHHHH
Q 007300 506 TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAKKWEET 580 (609)
Q Consensus 506 ~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~--~~~~~~~~~~~~~~---~~~fs~~~~a~~~~~~ 580 (609)
+||+.|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.+++++++ .++|||+.++++++++
T Consensus 675 ~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 675 FGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred CCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999987 999999999999998741 12667777777664 5899999999999987
Q ss_pred H
Q 007300 581 L 581 (609)
Q Consensus 581 ~ 581 (609)
.
T Consensus 745 ~ 745 (784)
T TIGR02470 745 A 745 (784)
T ss_pred H
Confidence 6
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=328.53 Aligned_cols=365 Identities=17% Similarity=0.253 Sum_probs=260.9
Q ss_pred ceEEEEEeecC--CccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 85 LNILFVGTEVA--PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 85 MkIl~vs~~~~--P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
-||+|+.+.-. |....||+++++.++++.|+. +|+++|-..+.+++. +...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCC
Confidence 38888876533 335689999999999999954 999999876544431 0122355
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
.++.+..+....+. ..+.+. - +...+.+..+..+...... ++||| |+|+... +..
T Consensus 59 ~~~~~~~~~~~~~~----~~~~~~--------~---~~~~~~~~~~~~~~~~~~~-------~~~vi-~v~~~~~-~~~- 113 (380)
T PRK15484 59 DIHYIGFSRIYKRL----FQKWTR--------L---DPLPYSQRILNIAHKFTIT-------KDSVI-VIHNSMK-LYR- 113 (380)
T ss_pred ceEEEEeccccchh----hhhhhc--------c---CchhHHHHHHHHHHhcCCC-------CCcEE-EEeCcHH-hHH-
Confidence 55555322211100 000000 0 1112333333333332212 47988 9987332 222
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
.++.. ++++|+++++|+... ...+..++.++++|
T Consensus 114 ~~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii~~S 147 (380)
T PRK15484 114 QIRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKIIVPS 147 (380)
T ss_pred HHHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEEEcC
Confidence 22222 268899999995311 11234679999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+. .+ ..++.+||||+|...|.+.. +..+++.++++.+ .++
T Consensus 148 ~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~~--~~~ 195 (380)
T PRK15484 148 QFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISPD--ETV 195 (380)
T ss_pred HHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCCC--CeE
Confidence 9999988752 11 22789999999988776642 3456677787643 478
Q ss_pred EEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCC-------hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~ 473 (609)
|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|. ..+.+.++++..+++.++.+.+..+.+++..+|+
T Consensus 196 il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~ 275 (380)
T PRK15484 196 LLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYP 275 (380)
T ss_pred EEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999865 789999999875 2356677777777777787777777888889999
Q ss_pred hCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 474 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 474 ~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++++
T Consensus 276 ~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 276 LADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLADPE 346 (380)
T ss_pred hCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcCHH
Confidence 99999999986 99999999999999999999999999999999999953 378999999999999999843
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
...+.+.+++.+.++|||+.++++|+++|++..
T Consensus 347 ~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 347 LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 223333334445789999999999999998753
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=321.01 Aligned_cols=365 Identities=23% Similarity=0.229 Sum_probs=258.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++++. |. .||.+.++.+|+++|+++||+|+|+|...+...... ..++.+
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 43 699999999999999999999999997532111100 011111
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.++.+.+... ....| .......+.+.++.. +||+| |+|.+.....+.++
T Consensus 53 ~~~~~~~~~~~-----~~~~~--------------~~~~~~~l~~~i~~~----------~~div-h~~~~~~~~~~~~~ 102 (371)
T cd04962 53 HEVEVPQYPLF-----QYPPY--------------DLALASKIAEVAKRY----------KLDLL-HVHYAVPHAVAAYL 102 (371)
T ss_pred EEecccccchh-----hcchh--------------HHHHHHHHHHHHhcC----------CccEE-eecccCCccHHHHH
Confidence 11111110000 00000 011223334444333 59999 99976554444444
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
...... ..++|+++++|+....- .+.. .....+.+..++.+|.++++|+.
T Consensus 103 ~~~~~~---~~~~~~i~~~h~~~~~~---------~~~~------------------~~~~~~~~~~~~~~d~ii~~s~~ 152 (371)
T cd04962 103 AREILG---KKDLPVVTTLHGTDITL---------VGQD------------------PSFQPATRFSIEKSDGVTAVSES 152 (371)
T ss_pred HHHhcC---cCCCcEEEEEcCCcccc---------cccc------------------ccchHHHHHHHhhCCEEEEcCHH
Confidence 332110 03789999999643210 0000 01123456778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
..+.+.+. ++ .. .++.+|+||+|...+.+.. +...+.+++++. +.++++
T Consensus 153 ~~~~~~~~--~~-~~------~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~il 201 (371)
T cd04962 153 LRQETYEL--FD-IT------KEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEKVLI 201 (371)
T ss_pred HHHHHHHh--cC-Cc------CCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCeEEE
Confidence 99988752 11 12 2799999999987776543 233456677654 448899
Q ss_pred EEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEec
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
++||+.+.||++.+++++.++.+ .+++|+++|+|+ ..+.++++..+.+ +++.+.+. . +.+..+|+.||++++|
T Consensus 202 ~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~~d~~v~p 277 (371)
T cd04962 202 HISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGK-Q-DHVEELLSIADLFLLP 277 (371)
T ss_pred EecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecC-c-ccHHHHHHhcCEEEeC
Confidence 99999999999999999999866 579999999987 3455666655543 45666553 3 4567899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~ 561 (609)
|.+|+||++++|||++|+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+|++
T Consensus 278 s~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~ 345 (371)
T cd04962 278 SEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQEFSR 345 (371)
T ss_pred CCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHHHHH
Confidence 99999999999999999999999999999999999999987 999999999999999987 566666665
Q ss_pred HH---HHhhCCchHHHHHHHHHHHHH
Q 007300 562 NG---MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 562 ~~---~~~~fs~~~~a~~~~~~~~~l 584 (609)
++ +.+.|||+.++++|.++|+++
T Consensus 346 ~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 346 AARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 55 468899999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=338.50 Aligned_cols=322 Identities=17% Similarity=0.183 Sum_probs=221.3
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+| |+|+|..++++..++.. .++|.|+|.|.+.-... .......-.....+. ....
T Consensus 408 ~PDlI-HaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y~-------------~~~r 465 (815)
T PLN00142 408 KPDLI-IGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY-PDSDIYWKKFDDKYH-------------FSCQ 465 (815)
T ss_pred CCCEE-EECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc-cccCCcccccchhhh-------------hhhc
Confidence 69999 99999999999999987 59999999997653111 100000000011110 0012
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHH-------HhcccCCCcc-chhh-----hccCCeeEecCCCCCCCcCCCCccc--cc
Q 007300 305 INWMKAGILESDMVLTVSPHYAQE-------LVSGEDKGVE-LDNI-----IRKTGIKGIVNGMDVQEWNPLTDKY--IG 369 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~-------l~~~~~~g~~-~~~~-----~~~~~i~vI~nGvd~~~~~p~~~~~--~~ 369 (609)
+......+..||.|++.|...... +.++..++++ +..+ ....++.+|++|+|...|.|...+. +.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 344566888999999999877642 2222122211 0000 0123889999999999888754210 00
Q ss_pred cccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCC-h------
Q 007300 370 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K------ 440 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~-~------ 440 (609)
.-++ ..+....+....++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|+|. +
T Consensus 546 ~l~n---~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHP---SIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcc---cchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 0000 001111223344567887666778999999999999999999999998754 579999999872 1
Q ss_pred hh---HHHHHHHHHhCC--CceEEEeecC----hHHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007300 441 PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 510 (609)
Q Consensus 441 ~~---~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 510 (609)
+. .+.+.++..+++ +++.+.+... .+.+..+++ .+|++++||.+|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 11 134566666654 4566544322 233444555 5799999999999999999999999999999999999
Q ss_pred cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---HHhhCCchHHHHHHHHHH
Q 007300 511 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 511 e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~--~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~ 581 (609)
|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.+|++++ +.++|||+.++++++++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999987 999999999999887631 1266777777766 457899999999998865
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=323.71 Aligned_cols=275 Identities=20% Similarity=0.220 Sum_probs=218.1
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+| |+|.++.+.....++.... ...|+++++|+...... .. ....
T Consensus 118 ~~dii-haH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~-------------~~--------------~~~~ 164 (406)
T PRK15427 118 VADVF-IAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR-------------EV--------------LNHY 164 (406)
T ss_pred CCCEE-EEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc-------------hh--------------hhhh
Confidence 59999 9998877666666554211 24567889996322000 00 0011
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
...++..++.+|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999986 566555 89999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEE
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 460 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 460 (609)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ .++.++++..+++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01234679999999999999999999999975 589999999998 6677777777654 567777
Q ss_pred eecChHHHHHHHHhCcEEEecCCC------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCC
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~ 534 (609)
+..+.+++..+|+.||++++||.. |++|++++|||++|+|||+|+.||+.|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 777888888999999999999974 99999999999999999999999999999999999987 99
Q ss_pred CCHHHHHHHHHHHHH-hhCHHHHHHHHHH---HHHhhCCchHHHHHHHHHHHHH
Q 007300 535 VDVAAVSTTVRRALA-TYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 535 ~d~~~la~~I~~ll~-~~~~~~~~~~~~~---~~~~~fs~~~~a~~~~~~~~~l 584 (609)
+|+++++++|.++++ + ++.+.+|+++ .+.++|+|+.+++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 5555555554 4689999999999999999863
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=311.77 Aligned_cols=358 Identities=18% Similarity=0.184 Sum_probs=246.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC-CccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
-||++|...+ ..||++.++.+|+++|.+.||++.+++.... .+.. +....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899998874 2599999999999999999999999985321 1111 00122444
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.+..... .. + .+...+.+.++.. +|||| |+|...+. ...+
T Consensus 56 ~~~~~~~~~----------------------~~---~-~~~~~l~~~l~~~----------~~Div-h~~~~~~~-~~~~ 97 (374)
T TIGR03088 56 FYALHKQPG----------------------KD---V-AVYPQLYRLLRQL----------RPDIV-HTRNLAAL-EAQL 97 (374)
T ss_pred EEEeCCCCC----------------------CC---h-HHHHHHHHHHHHh----------CCCEE-EEcchhHH-HHHH
Confidence 444321100 00 0 1222333444444 59999 99864332 2222
Q ss_pred HHHhhcCCCcccCceE-EEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHH-HhhcCCEEEee
Q 007300 244 LKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA-GILESDMVLTV 321 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~-v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~ad~vi~v 321 (609)
.... .+.|+ +++.|....... . + ......+++. ....+|.++++
T Consensus 98 ~~~~-------~~~~~~i~~~h~~~~~~~-----------~-----------~-----~~~~~~~~~~~~~~~~~~~i~v 143 (374)
T TIGR03088 98 PAAL-------AGVPARIHGEHGRDVFDL-----------D-----------G-----SNWKYRWLRRLYRPLIHHYVAV 143 (374)
T ss_pred HHHh-------cCCCeEEEeecCcccccc-----------h-----------h-----hHHHHHHHHHHHHhcCCeEEEe
Confidence 2222 24443 444442211000 0 0 0011233333 44579999999
Q ss_pred CHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCc
Q 007300 322 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 401 (609)
Q Consensus 322 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 401 (609)
|+..++.+.+. ++++.+ ++.+|+||+|.+.|.+.... +...+.....+ .+.+
T Consensus 144 s~~~~~~~~~~--~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~~~~ 195 (374)
T TIGR03088 144 SRDLEDWLRGP--VKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--DESV 195 (374)
T ss_pred CHHHHHHHHHh--cCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--CCCe
Confidence 99999988752 454444 89999999999888765311 11222222222 3558
Q ss_pred EEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHH
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~ 473 (609)
+|+++||+.++||++.+++|+.++.+ ++++|+++|+|+ ..+.++++..+++ ..+.+.+ + .+++..+|+
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~-~~~~~~~~~ 271 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG-E-RDDVPALMQ 271 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-C-cCCHHHHHH
Confidence 99999999999999999999998854 279999999987 4566666666554 2343333 2 445678999
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~ 553 (609)
.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++ +
T Consensus 272 ~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~ 339 (374)
T TIGR03088 272 ALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD--P 339 (374)
T ss_pred hcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 9999999999999999999999999999999999999999999999987 999999999999999987 5
Q ss_pred HHHHHHHHH---HHHhhCCchHHHHHHHHHHHHH
Q 007300 554 QALAEMMKN---GMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 554 ~~~~~~~~~---~~~~~fs~~~~a~~~~~~~~~l 584 (609)
+.+.+++++ .+.++|||+.++++|+++|+++
T Consensus 340 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 340 AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 555555544 4578999999999999999876
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=312.40 Aligned_cols=378 Identities=18% Similarity=0.172 Sum_probs=247.0
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
|||||...|++. ...|+++|+++||+|+++|+....... .||+++
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~--------------------------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP--------------------------GGVRVV 45 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------CCeeEE
Confidence 699999986442 456999999999999999987332111 045555
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+..+..-. . .+.+|.........-..++.+.+..+..+ ..+|||| |+|.... ...+++
T Consensus 46 ~~~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~pdvi-~~h~~~~--~~~~l~ 104 (396)
T cd03818 46 RYRPPRGPT-------S------GTHPYLREFEEAVLRGQAVARALLALRAK-----GFRPDVI-VAHPGWG--ETLFLK 104 (396)
T ss_pred EecCCCCCC-------C------CCCccchhHHHHHHHHHHHHHHHHHHHhc-----CCCCCEE-EECCccc--hhhhHH
Confidence 553221100 0 11123333333222223333333332110 1259999 9985222 233455
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
.. ++++|+|..+|-... .. . ...+....+....... .. ...........+..+|.++++|+..
T Consensus 105 ~~------~~~~~~v~~~~~~~~-~~-~----~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~ad~vi~~s~~~ 167 (396)
T cd03818 105 DV------WPDAPLIGYFEFYYR-AE-G----ADVGFDPEFPPSLDDA----LR-LRNRNALILLALAQADAGVSPTRWQ 167 (396)
T ss_pred Hh------CCCCCEEEEEeeeec-CC-C----CCCCCCCCCCCchhHH----HH-HHHhhhHhHHHHHhCCEEECCCHHH
Confidence 44 268898887763211 00 0 0001110000000000 00 0000111345688999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
++.+.+. + ..++.+||||+|.+.|.|.... ....+...+++ .+.++|+|
T Consensus 168 ~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~~~~~i~~ 216 (396)
T cd03818 168 RSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--PGDEVITF 216 (396)
T ss_pred HhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--CCCeEEEE
Confidence 9987641 1 1289999999999988775321 11111122222 34579999
Q ss_pred Eec-cccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-----------hhHHHHHHHHHhC-CCceEEEeecChHHHHH
Q 007300 406 IGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKFNIPLAHM 470 (609)
Q Consensus 406 iGr-l~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~-~~~v~~~~~~~~~~~~~ 470 (609)
+|| +++.||++.+++|++.+.+ ++++|+|+|++.. ..++.++++..+. .+++.+.+..+.+++..
T Consensus 217 vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~ 296 (396)
T cd03818 217 VARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLA 296 (396)
T ss_pred ECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHH
Confidence 998 9999999999999999865 7999999997421 1233345544322 24688877778888889
Q ss_pred HHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 297 ~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~i~~ll~~ 366 (396)
T cd03818 297 LLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAAVIELLDD 366 (396)
T ss_pred HHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999987 999999999999999998
Q ss_pred hCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007300 551 YGTQALAEMMKNG---MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 551 ~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~ 579 (609)
++.+.+|++++ +.++|||+.++++|++
T Consensus 367 --~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 367 --PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred --HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 55555555544 5678999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=311.25 Aligned_cols=380 Identities=24% Similarity=0.273 Sum_probs=263.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
+++++.+...+|. .||++.++.+|+++|+++||+|+|++...+...... ....+|+.+
T Consensus 7 ~~~~~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGAD--TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCCC--CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 3444444333343 799999999999999999999999997643211100 112234555
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.+....... +. .......+..+...+...++... .+||+| |+|.+..+.+...+
T Consensus 65 ~~~~~~~~~~----------~~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~Div-~~~~~~~~~~~~~~ 119 (398)
T cd03800 65 VRVPAGPAEY----------LP------KEELWPYLDEFADDLLRFLRREG--------GRPDLI-HAHYWDSGLVALLL 119 (398)
T ss_pred EecccccccC----------CC------hhhcchhHHHHHHHHHHHHHhcC--------CCccEE-EEecCccchHHHHH
Confidence 5443211100 00 00000111223344444444331 149999 99988877776666
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+.. .++|+|++.|+........ ...... .........++..++.+|.++++|+.
T Consensus 120 ~~~-------~~~~~i~~~h~~~~~~~~~--------~~~~~~-----------~~~~~~~~~~~~~~~~ad~ii~~s~~ 173 (398)
T cd03800 120 ARR-------LGIPLVHTFHSLGAVKRRH--------LGAADT-----------YEPARRIEAEERLLRAADRVIASTPQ 173 (398)
T ss_pred Hhh-------cCCceEEEeecccccCCcc--------cccccc-----------cchhhhhhHHHHHHhhCCEEEEcCHH
Confidence 654 5899999999754311100 000000 00011234456778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
..+.+.+. ++... .++.+|+||+|.+.|.+... ....+...+.+. +.++|+
T Consensus 174 ~~~~~~~~--~~~~~------~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~~--~~~~i~ 224 (398)
T cd03800 174 EAEELYSL--YGAYP------RRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRDP--DKPRIL 224 (398)
T ss_pred HHHHHHHH--ccccc------cccEEECCCCCccceecccc-------------------hhhHHHhhccCC--CCcEEE
Confidence 99888752 22221 26899999999988866532 111133444443 458999
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCc
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aD 476 (609)
|+||+.+.||++.+++|+..+.+ ++++|+++|++... ....++.+....+ +++.+.+..+.+++..+++.||
T Consensus 225 ~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 225 AVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred EEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCC
Confidence 99999999999999999999975 58999999987632 2334555555543 4677777778888889999999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 556 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 556 (609)
++++||..|++|++++|||++|+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++ ++.+
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~ 372 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PALR 372 (398)
T ss_pred EEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HHHH
Confidence 9999999999999999999999999999999999999999999987 899999999999999987 6666
Q ss_pred HHHHHHH---HHhhCCchHHHHHHH
Q 007300 557 AEMMKNG---MAQDLSWKGPAKKWE 578 (609)
Q Consensus 557 ~~~~~~~---~~~~fs~~~~a~~~~ 578 (609)
.++++++ +.++|||+.++++|+
T Consensus 373 ~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 373 RRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 6666655 458999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=301.06 Aligned_cols=329 Identities=19% Similarity=0.204 Sum_probs=237.3
Q ss_pred ceEEEEEeecCC--ccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 85 MkIl~vs~~~~P--~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
|||++|++.+.| ....||.++++.+|+.+|.++||+|+++++..+..... ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-------------------~~~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-------------------LVP------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-------------------eee------
Confidence 899999998744 34589999999999999999999999999864321110 000
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
. ........ +.............+.+.++.. +|||| |+|.+.....
T Consensus 56 -~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~----------~~Div-h~~~~~~~~~-- 101 (335)
T cd03802 56 -V--VPEPLRLD------------------APGRDRAEAEALALAERALAAG----------DFDIV-HNHSLHLPLP-- 101 (335)
T ss_pred -c--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhcC----------CCCEE-EecCcccchh--
Confidence 0 00000000 0000001111222222333222 59999 9998777655
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+... .+.|+++++|+..... ...........+.++++|
T Consensus 102 -~~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~~~s 139 (335)
T cd03802 102 -FARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFVSIS 139 (335)
T ss_pred -hhcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEEEec
Confidence 2211 5889999999654310 001233456788999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+...+.+.. . .++.+||||+|.+.|.+.. .+...
T Consensus 140 ~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~~~~ 173 (335)
T cd03802 140 DAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PKGDY 173 (335)
T ss_pred HHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CCCCE
Confidence 999887664 1 2899999999998886532 13468
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHh---CCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~---~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
++|+||+.+.||++.+++++++. +++|+|+|+|.. ...+...... ..+++.+.+..+.+.+..+++.+|+++
T Consensus 174 i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v 248 (335)
T cd03802 174 LLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALL 248 (335)
T ss_pred EEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEE
Confidence 99999999999999999998765 799999999862 2222222222 246788888878888888999999999
Q ss_pred ecCCC-CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007300 480 IPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 558 (609)
Q Consensus 480 ~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 558 (609)
+||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. . .+
T Consensus 249 ~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~---~~ 311 (335)
T cd03802 249 FPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D---RA 311 (335)
T ss_pred eCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---HH
Confidence 99985 99999999999999999999999999999999999986 44 99999999998664 2 12
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHH
Q 007300 559 MMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 559 ~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
.+++.+.++|||+.++++|+++|+
T Consensus 312 ~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 312 ACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 344556799999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=322.54 Aligned_cols=471 Identities=20% Similarity=0.259 Sum_probs=352.7
Q ss_pred eEEEEEeecC-----CccccchHHHHhhchhHHHHhCCCeEEEEeecCCC-cc------cc--------CC-------C-
Q 007300 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK------DA--------WD-------T- 137 (609)
Q Consensus 86 kIl~vs~~~~-----P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~-~~------~~--------~~-------~- 137 (609)
-++++|.||. | ...||+|...+...++++..|....-++..|.+ |. +. |+ .
T Consensus 87 ~~aYFs~E~gl~~~lp-iYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLP-IYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 4558998875 5 467999999999999999999999999987752 11 11 21 1
Q ss_pred ------ceEEEEEeCCEEeeEEEEEeeEcCeeEEEEeCcchhhhhcCCCCC-eeccCCCCCCCcchHHH---HHHHHHHH
Q 007300 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAA 207 (609)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~r---~~~~~~~~ 207 (609)
...+.+.+.++...++.++....+|+++++|++.+....+.+..+ .+|++ |+..| +.+|+.+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGG 238 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHH
Confidence 235667777888889999988889999999987743333333322 46763 45666 58999999
Q ss_pred HHhhhhhccCCCCCCCCCCceEEEecccccchHHH-----HHHHh-hcCCC--cccCceEEEEEecCccCC--ccccccc
Q 007300 208 LEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFEDF 277 (609)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~-----~l~~~-~~~~~--~~~~~~~v~~iH~~~~~~--~~~~~~~ 277 (609)
+++++.+++. |||| |+||||+++++. +++.. +.... -....+++||+|++.++| .|+.+.+
T Consensus 239 l~~Lr~lg~~--------pdVi-H~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~ 309 (778)
T cd04299 239 VRALRALGIK--------PTVY-HMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLV 309 (778)
T ss_pred HHHHHHhCCC--------CeEE-EeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHH
Confidence 9999887654 9999 999999999998 44321 00000 013578999999999999 8887766
Q ss_pred cc--------cCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH---HHHHhcccCCCccchhhhccC
Q 007300 278 GL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIRKT 346 (609)
Q Consensus 278 ~~--------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~~~~ 346 (609)
.. ++++...+..+.....-. ....+++++.++..|+.+.+||+-+ .+++......|.+.+ ..
T Consensus 310 ~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~----~~ 382 (778)
T cd04299 310 ERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE----EV 382 (778)
T ss_pred HHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----cC
Confidence 32 555544322221111000 0135799999999999999999988 555443223344332 33
Q ss_pred CeeEecCCCCCCCcC-CCCcccccccc---------------------CcchhcccchHHHHHHHHHh------------
Q 007300 347 GIKGIVNGMDVQEWN-PLTDKYIGVKY---------------------DASTVMDAKPLLKEALQAEV------------ 392 (609)
Q Consensus 347 ~i~vI~nGvd~~~~~-p~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------ 392 (609)
++..|.||||...|. |..++.+ .+| ....+...+..+|.+|++.+
T Consensus 383 ~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g 461 (778)
T cd04299 383 PIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRG 461 (778)
T ss_pred ceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Confidence 799999999999998 7655544 222 12334567777887776653
Q ss_pred ---------CCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC------hhhHHHHHHHHH
Q 007300 393 ---------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEI 451 (609)
Q Consensus 393 ---------gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~------~~~~~~l~~l~~ 451 (609)
+.+.+++.++|+|++|+..+|+.+++++.+.++.+ .+++|||+|++. +.+.+.+.++..
T Consensus 462 ~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~ 541 (778)
T cd04299 462 ASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSR 541 (778)
T ss_pred CchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHh
Confidence 56677888999999999999999999999888743 479999999987 467778888888
Q ss_pred --hCCCceEEEeecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccc-
Q 007300 452 --LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS- 526 (609)
Q Consensus 452 --~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~- 526 (609)
.+++++.+...|+..+++.++++||+.+.||+ +|+||++.+-||..|.+-+++.-|...|.. ++.|||.+|.-.
T Consensus 542 ~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~ 620 (778)
T cd04299 542 RPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDE 620 (778)
T ss_pred CcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCcc
Confidence 66779999999999999999999999999999 899999999999999999999999999887 789999997421
Q ss_pred -cccccCCCCCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHHHh---hCCchHHHHHHHHHHH
Q 007300 527 -VDCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 582 (609)
Q Consensus 527 -~~~~~v~~~d~~~la~~I~~ll~-~~-~------~~~~~~~~~~~~~~---~fs~~~~a~~~~~~~~ 582 (609)
.|.+.-+..|+++|.++|++.+. .+ + +..+.+|.+++|.+ .|||.+++++|.+-|.
T Consensus 621 ~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 621 YEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred ccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 13333456788889999976443 22 1 46799999999987 9999999999977554
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=312.38 Aligned_cols=381 Identities=14% Similarity=0.064 Sum_probs=238.7
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCC-CeEEEEeecCCCcccc--CCCceEEEEEeCCEEeeEEEEEeeE
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKDA--WDTDVVIELKVGDKIEKVRFFHCHK 159 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G-h~V~vit~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (609)
++|||++++..|.|| .+|+...+..++..|+++| |+|+||.|.++...+. ++....+...... ...++-+
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~-e~~~~~~---- 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQ-EAYVRQW---- 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhh-hhhhhhh----
Confidence 469999999999999 9999999999999999999 8999999987532110 1100000000000 0000000
Q ss_pred cCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchH---HHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecc-c
Q 007300 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVAND-W 235 (609)
Q Consensus 160 ~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~-~ 235 (609)
.+-.++++....+. . |++.+ .+.......+.+.++.+ +|||| |+|+ +
T Consensus 76 ~~~~v~r~~s~~~p----------~--------yp~r~~~~~r~~~~~~~i~~~l~~~----------~pDVI-Hv~tP~ 126 (462)
T PLN02846 76 LEERISFLPKFSIK----------F--------YPGKFSTDKRSILPVGDISETIPDE----------EADIA-VLEEPE 126 (462)
T ss_pred ccCeEEEecccccc----------c--------CcccccccccccCChHHHHHHHHhc----------CCCEE-EEcCch
Confidence 01111222111110 0 11100 01111223344445444 59999 8886 3
Q ss_pred ccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcC
Q 007300 236 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 315 (609)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 315 (609)
+.++.....+... .-.++|.+.|.-.. ..... ...+. ....+.....+|+++. .+
T Consensus 127 ~LG~~~~g~~~~~------k~~~vV~tyHT~y~-~Y~~~---~~~g~-------------~~~~l~~~~~~~~~r~--~~ 181 (462)
T PLN02846 127 HLTWYHHGKRWKT------KFRLVIGIVHTNYL-EYVKR---EKNGR-------------VKAFLLKYINSWVVDI--YC 181 (462)
T ss_pred hhhhHHHHHHHHh------cCCcEEEEECCChH-HHHHH---hccch-------------HHHHHHHHHHHHHHHH--hc
Confidence 3344311112111 12348889996211 00000 00000 0000011112233222 48
Q ss_pred CEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCC
Q 007300 316 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 395 (609)
Q Consensus 316 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ 395 (609)
|.++++|....+ +.+ .+...++|||.+.|.|... ..++..+ +
T Consensus 182 d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~~~-~ 223 (462)
T PLN02846 182 HKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQKN-G 223 (462)
T ss_pred CEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhhcC-C
Confidence 999999986655 443 3344568999998887632 1222222 2
Q ss_pred CCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH
Q 007300 396 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 396 ~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~ 473 (609)
.+...+.++|+||+.+.||++.|++|++++.+ ++++|+|+|+|+ .++.+++++.+++..+.++..+.... .+++
T Consensus 224 ~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~~--~~~~ 299 (462)
T PLN02846 224 EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHAD--PLFH 299 (462)
T ss_pred CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCHH--HHHH
Confidence 22223579999999999999999999999865 689999999998 67778888877664444455553332 5899
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~ 553 (609)
.+|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+++ .|.++++++|.+++.+. +
T Consensus 300 ~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~~~-~ 365 (462)
T PLN02846 300 DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALAEE-P 365 (462)
T ss_pred hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHccC-c
Confidence 99999999999999999999999999999999998 5999999999964 68999999999999862 2
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007300 554 QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 554 ~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
..+ ... ..+.|||+..+++++++|+--
T Consensus 366 ~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 APL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred hhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 222 222 236899999999999999743
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=310.92 Aligned_cols=371 Identities=17% Similarity=0.196 Sum_probs=245.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEc-Cee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR-GVD 163 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~ 163 (609)
|||+|+.+.+ ..||.+.++.+|+++|+++||+|+|+|+..+.... ++...+ ++.
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~---------------------~~~~~~~~~~ 55 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHC---------------------FEETKDGTLP 55 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhc---------------------chhccCCeeE
Confidence 8999998664 36999999999999999999999999975331100 000011 122
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhh--hhccCCCCCCCCCCceEEEecccccchHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR--ILNLNSNKYFSGPYDVVFVANDWHTSLIP 241 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~pDvV~h~h~~~~~~~~ 241 (609)
++.+... ..+ ... .....+..+.+....... ... ..++|+| |+|.+.... +
T Consensus 56 i~~~~~~--~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Dvi-~~~~~~~~~-~ 108 (392)
T cd03805 56 VRVRGDW--LPR-------SIF---------GRFHILCAYLRMLYLALYLLLLP-------DEKYDVF-IVDQVSACV-P 108 (392)
T ss_pred EEEEeEE--Ecc-------hhh---------HhHHHHHHHHHHHHHHHHHHhcc-------cCCCCEE-EEcCcchHH-H
Confidence 2222110 000 000 000011111111111110 111 1269999 888655432 2
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCc-hhHHHHHHhhcCCEEEe
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDMVLT 320 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~ad~vi~ 320 (609)
+++.. .+.|+++++|.... .+. . ...+.. .++.. ...+.+..++.+|.+++
T Consensus 109 -~~~~~-------~~~~~i~~~h~~~~--~~~-----~---~~~~~~----------~~~~~~~~~~e~~~~~~ad~ii~ 160 (392)
T cd03805 109 -LLKLF-------SPSKILFYCHFPDQ--LLA-----Q---RGSLLK----------RLYRKPFDWLEEFTTGMADKIVV 160 (392)
T ss_pred -HHHHh-------cCCcEEEEEecChH--Hhc-----C---CCcHHH----------HHHHHHHHHHHHHHhhCceEEEE
Confidence 22322 34899999994221 000 0 000000 00001 12344567889999999
Q ss_pred eCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCC
Q 007300 321 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 400 (609)
Q Consensus 321 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 400 (609)
+|+..++.+.+. ++.. ....+.+|+||+|.+.|.+.... . .+.....+ .+.
T Consensus 161 ~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~-~~~~~~~~--~~~ 211 (392)
T cd03805 161 NSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P-DPGLLIPK--SGK 211 (392)
T ss_pred cChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c-cccccccC--CCc
Confidence 999999988752 2211 11144699999999888664321 0 11112222 355
Q ss_pred cEEEEEeccccccCHHHHHHHHhhccc-----CCeEEEEEeCCCh------hhHHHHHHHHHh-C--CCceEEEeecChH
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y--PEKARGVAKFNIP 466 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~--~~~v~~~~~~~~~ 466 (609)
++|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. .+.+.++++..+ . .+++.+.+..+.+
T Consensus 212 ~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~ 291 (392)
T cd03805 212 KTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDS 291 (392)
T ss_pred eEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChH
Confidence 899999999999999999999999864 4899999999863 244667777665 3 3578888888888
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
++..+|+.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++ ++ |+++++++|.+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~-~~~~~a~~i~~ 360 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC----------EP-TPEEFAEAMLK 360 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------CC-CHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999975 55 89999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhhCCchHHHHHH
Q 007300 547 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 577 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~ 577 (609)
++++ ++...++++++ +.++|||+.+++++
T Consensus 361 l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 361 LAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 9998 44555555544 57899999998864
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=307.49 Aligned_cols=380 Identities=14% Similarity=0.123 Sum_probs=234.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|+.. ...||+|.++.+|++.|.++||+|.++..+......... ..++..
T Consensus 1 mkil~i~~~----l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVR----LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEee----ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 899999976 346999999999999999999999999987332211000 000000
Q ss_pred EEEeCc-------chhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccccc
Q 007300 165 VFVDHP-------WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHT 237 (609)
Q Consensus 165 ~~v~~~-------~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~ 237 (609)
.....+ ..+.++.++.| ++ -..+..+.+.. .+ +|||| |+|..+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------~~~~~~~~i~~-~~--------~pDvi-HlH~~~~ 105 (405)
T PRK10125 55 VIKHTPRMTAMANIALFRLFNRDL---FG----------------NFNELYRTITR-TP--------GPVVL-HFHVLHS 105 (405)
T ss_pred EEEecccHHHHHHHHHHHhcchhh---cc----------------hHHHHHHHHhh-cc--------CCCEE-EEecccC
Confidence 000001 11111111000 10 01112222211 22 59999 9998887
Q ss_pred chHHH--HHHH--hhcCCCcccCceEEEEEecCcc-CCccccccccccCCccccccc---cccccCCCCCc-------CC
Q 007300 238 SLIPC--YLKT--MYKPKGMYKSAKVVFCIHNIAY-QGRFAFEDFGLLNLPAQFKSS---FDFIDGYNKPV-------RG 302 (609)
Q Consensus 238 ~~~~~--~l~~--~~~~~~~~~~~~~v~~iH~~~~-~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~-------~~ 302 (609)
..+.. +++. ..+.. -.++|+|+|+||... .|.+....- -..|... +....+|.+.. +.
T Consensus 106 ~~~~~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~~-----C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~ 178 (405)
T PRK10125 106 YWLNLKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTDG-----CEGWKTGCQKCPTLNNYPPVKVDRAHQLVA 178 (405)
T ss_pred ceecHHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCcc-----cccccccCCCCCCccCCCCCccchHHHHHH
Confidence 53322 2211 00000 157999999998642 233332110 0011111 11111111100 11
Q ss_pred chhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccch
Q 007300 303 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 382 (609)
Q Consensus 303 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 382 (609)
.+....+...+.++.++++|+..++.+.+. ++. .++.+|+||+|+..+.+....
T Consensus 179 ~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~~---------------- 232 (405)
T PRK10125 179 GKRQLFREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAEL---------------- 232 (405)
T ss_pred HHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCcccccccccc----------------
Confidence 122223334456789999999999988752 332 289999999997543322110
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEecc--ccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEE
Q 007300 383 LLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 460 (609)
Q Consensus 383 ~~~~~~~~~~gl~~~~~~~~i~~iGrl--~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 460 (609)
... . ..++.++|+++|+. .+.||++.|++|+..+. ++++|+|+|+|++.. ..++...
T Consensus 233 ---~~~----~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~~ 291 (405)
T PRK10125 233 ---PPV----R--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVNH 291 (405)
T ss_pred ---ccc----c--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEEe
Confidence 000 0 11255789999994 37899999999999884 589999999976311 1235444
Q ss_pred eec-ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHH
Q 007300 461 AKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 461 ~~~-~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
+.. +...+..+|+.||++|+||.+|+||++++|||+||+|||+|++||++|++.++ +|+++ +++|+++
T Consensus 292 g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~~ 360 (405)
T PRK10125 292 GFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVLQ 360 (405)
T ss_pred cCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHHH
Confidence 322 45567789999999999999999999999999999999999999999999875 99987 9999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007300 540 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 540 la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
|++.+...+.+.........+++.+.++|||+.++++|+++|+++
T Consensus 361 La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 361 LAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 998654333220000111224455678899999999999999864
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=301.65 Aligned_cols=359 Identities=18% Similarity=0.190 Sum_probs=241.6
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..+ + .||++.++.+++.+|.+.||+|+++++.... +.+... + + .+....|.++
T Consensus 1 ki~~~~~~~-~---~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~--~~~~~~-----------~--~-~~~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP-Y---GGGVAEILHSLVPLMRDLGVDTRWEVIKGDP--EFFNVT-----------K--K-FHNALQGADI- 59 (372)
T ss_pred CeEEEeCCC-C---CCcHHHHHHHHHHHHHHcCCCceEEecCCCh--hHHHHH-----------H--H-hhHhhcCCCC-
Confidence 689998763 3 6999999999999999999999999975221 000000 0 0 0000001111
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhh-hhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR-ILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+ .... .+ ..+......... .+. ..+|||| |+|++....++...
T Consensus 60 -------------------~-------~~~~-~~-~~~~~~~~~~~~~~~~-------~~~~Dvv-~~h~~~~~~~~~~~ 103 (372)
T cd03792 60 -------------------E-------LSEE-EK-EIYLEWNEENAERPLL-------DLDADVV-VIHDPQPLALPLFK 103 (372)
T ss_pred -------------------C-------CCHH-HH-HHHHHHHHHHhccccc-------cCCCCEE-EECCCCchhHHHhh
Confidence 0 1111 00 111111111111 111 1269999 99988743333222
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+. .++|+|++.|+..... ....+.+++..+..+|.+++.|+.
T Consensus 104 ~~--------~~~~~i~~~H~~~~~~------------------------------~~~~~~~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 104 KK--------RGRPWIWRCHIDLSSP------------------------------NRRVWDFLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred hc--------CCCeEEEEeeeecCCC------------------------------cHHHHHHHHHHHHhCCEEeecHHH
Confidence 21 3789999999632100 001234567778899999998843
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
+.. .+++. .++ +||||+|........ ++ +.....+++++|++. +.++|+
T Consensus 146 ~~~-------~~~~~------~~~-vipngvd~~~~~~~~-------~~--------~~~~~~~~~~~~~~~--~~~~i~ 194 (372)
T cd03792 146 YVP-------PQVPP------RKV-IIPPSIDPLSGKNRE-------LS--------PADIEYILEKYGIDP--ERPYIT 194 (372)
T ss_pred hcC-------CCCCC------ceE-EeCCCCCCCccccCC-------CC--------HHHHHHHHHHhCCCC--CCcEEE
Confidence 322 22222 144 999999965311110 11 122456777888764 458999
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHh--CCCceEEEeec--ChHHHHHHHHhC
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEKARGVAKF--NIPLAHMIIAGA 475 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~v~~~~~~--~~~~~~~~l~~a 475 (609)
++||+.+.||++.+++|++.+.+ ++++|+|+|+|+. ...+.++++... ..+++.+.+.. +.+++..+|+.|
T Consensus 195 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 274 (372)
T cd03792 195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS 274 (372)
T ss_pred EEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999998865 6899999999862 233334444422 33456666554 677888899999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 555 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 555 (609)
|++++||.+|+||++++|||+||+|||+|+.||..+++.++.+|+++ + +.++++.+|.+++.+ ++.
T Consensus 275 d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~--~~~~~a~~i~~ll~~--~~~ 340 (372)
T cd03792 275 TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D--TVEEAAVRILYLLRD--PEL 340 (372)
T ss_pred eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C--CcHHHHHHHHHHHcC--HHH
Confidence 99999999999999999999999999999999999999999999975 3 567889999999987 556
Q ss_pred HHHHHHHH---HHhhCCchHHHHHHHHHHHHH
Q 007300 556 LAEMMKNG---MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 556 ~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l 584 (609)
+.+|++++ +.++|||+.++++|+++|+++
T Consensus 341 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 341 RRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 66666554 568999999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=294.15 Aligned_cols=357 Identities=18% Similarity=0.178 Sum_probs=240.9
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+.+++| ...||++.++.+|+++|.++||+|+|+++....... .....|++++
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 79999876555 348999999999999999999999999976332110 1123466666
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+..+.... ...+...........+ .. . ++|+| |........+...++
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~-~~-~-------~~~~i-~~~~~~~~~~~~~~~ 105 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF-VK-R-------DIDHV-HALGPAIAPFLPLLR 105 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh-cc-C-------CeEEE-EecCccHHHHHHHHH
Confidence 553221000 0000011111111211 11 0 24555 443322212211222
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
. .+.|+++++|+..+... .... +.........+..++.+|.++++|+..
T Consensus 106 ~--------~~~~~v~~~h~~~~~~~---------~~~~--------------~~~~~~~~~~~~~~~~ad~ii~~s~~~ 154 (363)
T cd04955 106 L--------KGKKVVVNMDGLEWKRA---------KWGR--------------PAKRYLKFGEKLAVKFADRLIADSPGI 154 (363)
T ss_pred h--------cCCCEEEEccCcceeec---------cccc--------------chhHHHHHHHHHHHhhccEEEeCCHHH
Confidence 1 47899999997543110 0000 000011223456778999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
++.+... +|.. . .+||||+|...+.+. ...+...+++ +.+.++|
T Consensus 155 ~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~i~~ 198 (363)
T cd04955 155 KEYLKEK--YGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRYYLL 198 (363)
T ss_pred HHHHHHh--cCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcEEEE
Confidence 9998642 4432 3 889999998765431 1233445554 2346889
Q ss_pred EeccccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCC
Q 007300 406 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
+||+.+.||++.+++|+.++.. +++|+++|+|+ ..+.+.+.+. ....+++.+.+..+.+....++..||++++||.
T Consensus 199 ~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~ 276 (363)
T cd04955 199 VGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFYLHGH 276 (363)
T ss_pred EecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEEeCCc
Confidence 9999999999999999999865 89999999984 2344444431 223456888877788888889999999999999
Q ss_pred C-CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007300 484 F-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 562 (609)
Q Consensus 484 ~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~ 562 (609)
. |+||++++|||++|+|||+|+.|+..|++.+ +|+++ ++.|. ++++|.+++++ ++.+.+++++
T Consensus 277 ~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~~~~~ 340 (363)
T cd04955 277 SVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSAMAKA 340 (363)
T ss_pred cCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHHHHHH
Confidence 9 9999999999999999999999999999987 67766 66665 99999999998 4555555554
Q ss_pred H---HHhhCCchHHHHHHHHHHH
Q 007300 563 G---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 563 ~---~~~~fs~~~~a~~~~~~~~ 582 (609)
+ +.+.|||+.++++|+++|+
T Consensus 341 ~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 341 ARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 4 5678999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=301.46 Aligned_cols=219 Identities=17% Similarity=0.202 Sum_probs=176.6
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcC-CCCccccccccCcchhcccchHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
+..+|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.+. +..
T Consensus 131 ~~~~d~~i~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------- 175 (359)
T PRK09922 131 ITCADYHLAISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------- 175 (359)
T ss_pred hhcCCEEEEcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc--------------------------
Confidence 36899999999999999986 565554 899999999965442 211
Q ss_pred HhCCCCCCCCcEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecC--
Q 007300 391 EVGLPVDRNIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFN-- 464 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~-- 464 (609)
...+.++++|+||+. ++||++.+++++.++.. +++|+|+|+|+ ..+.++++..+++ +++.+.+..+
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~ 247 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQP 247 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 112457899999996 56999999999998854 89999999997 4566777766543 5677665443
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC-CCCcccccccCcceeEecccccccccCCCCCHHHHHHH
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 543 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~ 543 (609)
.+.+..+|+.+|++++||.+|+||++++|||+||+|||+|+ .||..|+|.++.+|+++ +++|+++++++
T Consensus 248 ~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~ 317 (359)
T PRK09922 248 WEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGK 317 (359)
T ss_pred HHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHH
Confidence 36677889999999999999999999999999999999999 89999999999999987 99999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 544 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 544 I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
|.+++++++..... .......+|+-+...+++.++|..+.
T Consensus 318 i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 318 LNKVISGEVKYQHD--AIPNSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred HHHHHhCcccCCHH--HHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999984321122 22223577899999999999998875
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=285.72 Aligned_cols=368 Identities=20% Similarity=0.266 Sum_probs=268.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
++|++|+.+|+|. .||++..++.|++.|.+.||.|.++|-.|++... + +...+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------i---rylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------I---RYLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------e---eeecCCceE
Confidence 5799999999997 8999999999999999999999999999874321 2 223456888
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
|.++....... .|-..+|+ .++++....+ . .+..+| |.|...+.+.--.+
T Consensus 58 yylp~~v~~n~---tT~ptv~~------------~~Pllr~i~l----r----------E~I~iv-hghs~fS~lahe~l 107 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFS------------DFPLLRPILL----R----------ERIEIV-HGHSPFSYLAHEAL 107 (426)
T ss_pred EEEeeeeeecc---cchhhhhc------------cCcccchhhh----h----------hceEEE-ecCChHHHHHHHHH
Confidence 88764432221 01111121 1222211111 1 147888 99876555554333
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
.... ..|.++|||-|.+ |.+.++.....+ +.++..+...|++||+|..
T Consensus 108 ~har-----tMGlktVfTdHSl-----fGfad~~si~~n----------------------~ll~~sL~~id~~IcVsht 155 (426)
T KOG1111|consen 108 MHAR-----TMGLKTVFTDHSL-----FGFADIGSILTN----------------------KLLPLSLANIDRIICVSHT 155 (426)
T ss_pred HHHH-----hcCceEEEecccc-----ccccchhhhhhc----------------------ceeeeeecCCCcEEEEeec
Confidence 3322 1589999999963 333322211111 2234457789999999998
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.++-..= .-.++++ ++.+|||.++...|.|.... . .+.+...|+
T Consensus 156 skentvl--r~~L~p~------kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~~iv 199 (426)
T KOG1111|consen 156 SKENTVL--RGALAPA------KVSVIPNAVVTHTFTPDAAD---------------------------K-PSADIITIV 199 (426)
T ss_pred CCCceEE--EeccCHh------HeeeccceeeccccccCccc---------------------------c-CCCCeeEEE
Confidence 8775442 1223333 99999999999999985321 0 123447899
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh--hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.++||-.+||+|.|+++++++.+ ++++|+|+|+|++ .+++.++++.. .+++.+.+..+.+++.+.|...|+|+.
T Consensus 200 v~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l--~~rV~~lG~v~h~~Vr~vl~~G~IFln 277 (426)
T KOG1111|consen 200 VASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFL--QDRVVMLGTVPHDRVRDVLVRGDIFLN 277 (426)
T ss_pred EEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhc--cCceEEecccchHHHHHHHhcCcEEec
Confidence 99999999999999999999976 8999999999994 46666666654 356999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
||..|+|+++++|||+||++||+|..||++|++.+. .-++ ...+++++++++++++..... .-.-.
T Consensus 278 tSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~-----------~~~~~~dl~~~v~~ai~~~~~--~p~~~ 343 (426)
T KOG1111|consen 278 TSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITL-----------GEPGPDDLVGAVEKAITKLRT--LPLEF 343 (426)
T ss_pred cHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceec-----------cCCChHHHHHHHHHHHHHhcc--CchhH
Confidence 999999999999999999999999999999999876 2222 677889999999999886322 11222
Q ss_pred HHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007300 561 KNGMAQDLSWKGPAKKWEETLLNLEVAGS 589 (609)
Q Consensus 561 ~~~~~~~fs~~~~a~~~~~~~~~l~~~~~ 589 (609)
.+.+.+.|+|+..+++.+++|.++.....
T Consensus 344 h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 344 HDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 34467889999999999999999987653
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=292.55 Aligned_cols=351 Identities=19% Similarity=0.229 Sum_probs=247.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++++.. + ..||.+..+..++.+|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 2599999999999999999999999997611
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
.+ . +.++.. +|||| |+|.+....+....
T Consensus 42 ------~~-~----------------------------------~~~~~~----------~~dii-h~~~~~~~~~~~~~ 69 (365)
T cd03825 42 ------AL-I----------------------------------SKIEII----------NADIV-HLHWIHGGFLSIED 69 (365)
T ss_pred ------hh-h----------------------------------hChhcc----------cCCEE-EEEccccCccCHHH
Confidence 00 0 001111 59999 99976665544333
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccc---cccccCCCC-CcCCchhHHHHHHh-hcCCEEE
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSS---FDFIDGYNK-PVRGRKINWMKAGI-LESDMVL 319 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~k~~~-~~ad~vi 319 (609)
..... .++|+|+++|+..+...-.. . ......+... ..+...+.. .+....+.+.+..+ ..++.++
T Consensus 70 ~~~~~-----~~~~~v~~~hd~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (365)
T cd03825 70 LSKLL-----DRKPVVWTLHDMWPFTGGCH--Y--PGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIV 140 (365)
T ss_pred HHHHH-----cCCCEEEEcccCcccccccC--C--ccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEE
Confidence 32211 38999999998543210000 0 0000000000 000111100 00111122222223 4577899
Q ss_pred eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 320 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 320 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
++|+...+.+.+. +.++ ..++.+||||+|.+.|.|.. +...+..++++.+
T Consensus 141 ~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~~-- 190 (365)
T cd03825 141 APSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPAD-- 190 (365)
T ss_pred ehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCCC--
Confidence 9999999988762 2222 23899999999998886643 4456777777644
Q ss_pred CcEEEEEecccc--ccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC-hHHHHHHHH
Q 007300 400 IPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMIIA 473 (609)
Q Consensus 400 ~~~i~~iGrl~~--~Kg~~~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~~l~ 473 (609)
.+++++.|+... .||++.+++++..+.+ ++++++++|.+...... ....++.+.+..+ .+.+..+|+
T Consensus 191 ~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ 263 (365)
T cd03825 191 KKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALIYS 263 (365)
T ss_pred CeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHHHH
Confidence 367777777765 8999999999999875 68999999998732221 2334577777766 677888999
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~ 553 (609)
.||++++||..|+||++++|||++|+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 264 ~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~--~ 331 (365)
T cd03825 264 AADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD--P 331 (365)
T ss_pred hCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 9999999999999999999999999999999999999999999999986 889999999999999987 4
Q ss_pred HHHHHHHHH---HHHhhCCchHHHHHHHHHHHHH
Q 007300 554 QALAEMMKN---GMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 554 ~~~~~~~~~---~~~~~fs~~~~a~~~~~~~~~l 584 (609)
+.+.+++++ .+.++|||+.++++|+++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 332 DEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 445555544 4578899999999999999864
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=291.39 Aligned_cols=353 Identities=19% Similarity=0.247 Sum_probs=250.3
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||+++++.+ ..||.+.++.+|+++|.++||+|++++........... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588887663 36999999999999999999999999975321111000 000000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+... . ....+......+.+.++.. +||+| |+|..++.++..+++
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~----------~pdiv-~~~~~~~~~~~~l~~ 98 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQF----------KPDVV-HAHMFHANIFARLLR 98 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHhc----------CCCEE-EEcccchHHHHHHHH
Confidence 11000 0 0000111112233333333 59999 999877766666665
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
... .+.+++++.|+....+. ......+.....++.++++|+..
T Consensus 99 ~~~------~~~~~v~~~h~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~s~~~ 141 (360)
T cd04951 99 LFL------PSPPLICTAHSKNEGGR-------------------------------LRMLAYRLTDFLSDLTTNVSKEA 141 (360)
T ss_pred hhC------CCCcEEEEeeccCchhH-------------------------------HHHHHHHHHhhccCceEEEcHHH
Confidence 542 57899999996432110 01122233445688899999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+... .+++.+ ++.+||||+|...+.+... .+..++++++++. +.++++|
T Consensus 142 ~~~~~~~--~~~~~~------~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~~l~ 193 (360)
T cd04951 142 LDYFIAS--KAFNAN------KSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFVILA 193 (360)
T ss_pred HHHHHhc--cCCCcc------cEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEEEEE
Confidence 9988762 223333 8999999999887765421 2455777888764 4489999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEec
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
+||+.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .+++..+|+.||++++|
T Consensus 194 ~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 194 VGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGL--RDDIAAYYNAADLFVLS 269 (360)
T ss_pred EeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhhceEEec
Confidence 9999999999999999999865 589999999988 4455666555543 45666553 34566799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH-
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM- 560 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~- 560 (609)
|..|++|++++|||++|+|||+++.|+..|++.+ +|+.+ +++|+++++++|.+++++. ......+.
T Consensus 270 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~~~~ 336 (360)
T cd04951 270 SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDIIGA 336 (360)
T ss_pred ccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHH
Confidence 9999999999999999999999999999999987 77766 8999999999999998642 33333333
Q ss_pred -HHHHHhhCCchHHHHHHHHHHH
Q 007300 561 -KNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 561 -~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
++.+.+.|||+.++++|+++|.
T Consensus 337 ~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 337 RRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhh
Confidence 3456899999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=288.72 Aligned_cols=360 Identities=24% Similarity=0.265 Sum_probs=252.2
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+..|+|. .||.+.++..|+++|.++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 5999999999999999999999999987432211100 000010
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccc-hHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTS-LIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~-~~~~~l 244 (609)
.+..+.+.. .... ...+ ....+.++.. +||+| |+|..... .....+
T Consensus 56 ~~~~~~~~~-------~~~~-----------~~~~----~~~~~~~~~~----------~pdii-~~~~~~~~~~~~~~~ 102 (364)
T cd03814 56 SVPLPGYPE-------IRLA-----------LPPR----RRVRRLLDAF----------APDVV-HIATPGPLGLAALRA 102 (364)
T ss_pred ccccCcccc-------eEec-----------ccch----hhHHHHHHhc----------CCCEE-EEeccchhhHHHHHH
Confidence 000000000 0000 0000 0111122222 59999 87754332 222222
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
... .++|+++++|+...+- . ... .. ...........+..++.+|.++++|+.
T Consensus 103 ~~~-------~~~~~i~~~~~~~~~~--~----~~~-~~--------------~~~~~~~~~~~~~~~~~~d~i~~~s~~ 154 (364)
T cd03814 103 ARR-------LGIPVVTSYHTDFPEY--L----RYY-GL--------------GPLSWLAWAYLRWFHNRADRVLVPSPS 154 (364)
T ss_pred HHH-------cCCCEEEEEecChHHH--h----hhc-cc--------------chHhHhhHHHHHHHHHhCCEEEeCCHH
Confidence 222 5899999999643210 0 000 00 000011134556678899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
..+.+.+ .+.. ++.+++||+|...+.+... ....+.+++ + .+.++++
T Consensus 155 ~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~-~--~~~~~i~ 201 (364)
T cd03814 155 LADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG-P--PDRPVLL 201 (364)
T ss_pred HHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC-C--CCCeEEE
Confidence 9996664 2222 7899999999988876532 122334444 2 2457999
Q ss_pred EEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCC
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
|+|++.+.||++.+++++.++.+ ++++|+|+|.|. ....++ ....++.+.+..+.+++..+++.||++++||.
T Consensus 202 ~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~--~~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~ 275 (364)
T cd03814 202 YVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP--ARARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFPSR 275 (364)
T ss_pred EEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc--hHHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEECcc
Confidence 99999999999999999999976 589999999987 333333 33456887777788888899999999999999
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007300 484 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 563 (609)
Q Consensus 484 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~ 563 (609)
.|+||++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++++ ++.+.++++++
T Consensus 276 ~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~~~ 343 (364)
T cd03814 276 TETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMAARA 343 (364)
T ss_pred cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 999999999999999997 66666776666
Q ss_pred H--HhhCCchHHHHHHHHHHH
Q 007300 564 M--AQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 564 ~--~~~fs~~~~a~~~~~~~~ 582 (609)
. .++|||+.++++++++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 3 368999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=292.45 Aligned_cols=272 Identities=22% Similarity=0.284 Sum_probs=212.0
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+| |+|....+.....+.+. .++|+++++|+......... . .... ....
T Consensus 82 ~~dvv-h~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---~---~~~~---------------~~~~ 132 (367)
T cd05844 82 RPDLV-HAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---L---LRSR---------------WALY 132 (367)
T ss_pred CCCEE-EeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---h---cccc---------------hhHH
Confidence 59999 99866555544444433 58999999996432110000 0 0000 0112
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
....+..++.+|.++++|+..++.+.+ +|.+.+ ++.+++||+|.+.+.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234566778999999999999999986 455544 8999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEE
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 460 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~ 460 (609)
..+.+.++|+|++.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..++ ..++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999865 689999999987 566777777663 4568777
Q ss_pred eecChHHHHHHHHhCcEEEecCC------CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCC
Q 007300 461 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~ 534 (609)
+..+.+++..+|+.||++++||. .|+||++++|||++|+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 77788888899999999999997 499999999999999999999999999999999999987 89
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHH
Q 007300 535 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 535 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~ 579 (609)
.|+++++++|.+++++ ++.+.++++++ +.+.|||+..++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999987 55555555444 5789999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=288.64 Aligned_cols=357 Identities=20% Similarity=0.205 Sum_probs=255.0
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 78999988644 9999999999999999999999999752211000 0001245554
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+..+.... .......+.+.++.. +||+| |+|.++.........
T Consensus 56 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~----------~~div-~~~~~~~~~~~~~~~ 99 (365)
T cd03807 56 CLGKRPGRP-------------------------DPGALLRLYKLIRRL----------RPDVV-HTWMYHADLYGGLAA 99 (365)
T ss_pred EEecccccc-------------------------cHHHHHHHHHHHHhh----------CCCEE-EeccccccHHHHHHH
Confidence 443221100 001112233333333 59999 888777666555544
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
... .+.++++++|+...... .. .........+.....+|.++++|+..
T Consensus 100 ~~~------~~~~~i~~~~~~~~~~~-------------~~-------------~~~~~~~~~~~~~~~~~~~i~~s~~~ 147 (365)
T cd03807 100 RLA------GVPPVIWGIRHSDLDLG-------------KK-------------STRLVARLRRLLSSFIPLIVANSAAA 147 (365)
T ss_pred Hhc------CCCcEEEEecCCccccc-------------ch-------------hHhHHHHHHHHhccccCeEEeccHHH
Confidence 431 47899999997554211 00 00012233455567899999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.+ ++.+.+ ++.+++||+|...+.+.... +..++++++++. +.++|+|
T Consensus 148 ~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~i~~ 198 (365)
T cd03807 148 AEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFLIGI 198 (365)
T ss_pred HHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeEEEE
Confidence 999986 355444 88999999998877654321 445567778764 4489999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH-h--CCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~--~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+|++.+.||++.+++++..+.+ ++++|+|+|.+.. ...+++... . ...++.+.+. .+++..+|+.||++++
T Consensus 199 ~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 199 VARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred ecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCEEEe
Confidence 9999999999999999999865 6899999999873 233333332 2 2334555442 3456679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
||..|++|++++|||++|+|||+++.|+..|++.+ +|+++ +++|+++++++|.+++++ ++.+.+++
T Consensus 275 ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~ 340 (365)
T cd03807 275 SSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQALG 340 (365)
T ss_pred CCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHHHHH
Confidence 99999999999999999999999999999999988 88876 889999999999999998 45555555
Q ss_pred HHH---HHhhCCchHHHHHHHHHHH
Q 007300 561 KNG---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 561 ~~~---~~~~fs~~~~a~~~~~~~~ 582 (609)
+++ +.++|||+.++++|+++|+
T Consensus 341 ~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 341 EAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 444 5788999999999999884
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=291.26 Aligned_cols=338 Identities=22% Similarity=0.243 Sum_probs=238.9
Q ss_pred ccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEEEEeCcchhhhhcC
Q 007300 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178 (609)
Q Consensus 99 ~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~~ 178 (609)
..||++.++.+|+++|+++||+|.++++..... .. ....|++++.+.... .
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~--~---- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLV-AE----------------------LEAEGSRHIKLPFIS--K---- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchH-HH----------------------HHhcCCeEEEccccc--c----
Confidence 359999999999999999999999998752211 10 011133333221100 0
Q ss_pred CCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCce
Q 007300 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 258 (609)
Q Consensus 179 ~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~ 258 (609)
... ........+...++.. +||+| |+|.....+...++... .++|
T Consensus 59 ----~~~-------------~~~~~~~~l~~~~~~~----------~~dii-~~~~~~~~~~~~~~~~~-------~~~~ 103 (355)
T cd03819 59 ----NPL-------------RILLNVARLRRLIREE----------KVDIV-HARSRAPAWSAYLAARR-------TRPP 103 (355)
T ss_pred ----chh-------------hhHHHHHHHHHHHHHc----------CCCEE-EECCCchhHHHHHHHHh-------cCCC
Confidence 000 0111112223333332 59999 99876655554444432 4899
Q ss_pred EEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCcc
Q 007300 259 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 338 (609)
Q Consensus 259 ~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~ 338 (609)
+++++|+.... ..+.+..+..+|.++++|+...+.+.+ .++++
T Consensus 104 ~i~~~h~~~~~-----------------------------------~~~~~~~~~~~~~vi~~s~~~~~~~~~--~~~~~ 146 (355)
T cd03819 104 FVTTVHGFYSV-----------------------------------NFRYNAIMARGDRVIAVSNFIADHIRE--NYGVD 146 (355)
T ss_pred EEEEeCCchhh-----------------------------------HHHHHHHHHhcCEEEEeCHHHHHHHHH--hcCCC
Confidence 99999964320 013455677899999999999999984 25555
Q ss_pred chhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHH
Q 007300 339 LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 418 (609)
Q Consensus 339 ~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~l 418 (609)
.+ ++.+|+||+|...|.+.... ......+++.++++. +.++++|+||+.+.||++.+
T Consensus 147 ~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~~~i~~~Gr~~~~Kg~~~l 203 (355)
T cd03819 147 PD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLPK--GKPVILLPGRLTRWKGQEVF 203 (355)
T ss_pred hh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCCC--CceEEEEeeccccccCHHHH
Confidence 44 89999999999888654311 111223567777654 44899999999999999999
Q ss_pred HHHHhhccc--CCeEEEEEeCCCh--hhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEecC-CCCCCcHHH
Q 007300 419 AAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCGLIQ 491 (609)
Q Consensus 419 l~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~pS-~~E~~gl~~ 491 (609)
++++..+.+ ++++|+|+|.+.. .+.+.+.++..+++ +++.+.+. .+++..+|+.||++++|| ..|++|+++
T Consensus 204 i~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l 281 (355)
T cd03819 204 IEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTA 281 (355)
T ss_pred HHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHH
Confidence 999999977 6899999999863 34455555555443 45665554 455678999999999999 789999999
Q ss_pred HHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH---HHHHHHhhC
Q 007300 492 LHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM---MKNGMAQDL 568 (609)
Q Consensus 492 lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~---~~~~~~~~f 568 (609)
+|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++... ++.+.++ +++.+.++|
T Consensus 282 ~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~~~f 350 (355)
T cd03819 282 VEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVETLF 350 (355)
T ss_pred HHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987 9999999999997666531 4444444 445568999
Q ss_pred CchHH
Q 007300 569 SWKGP 573 (609)
Q Consensus 569 s~~~~ 573 (609)
||+.+
T Consensus 351 ~~~~~ 355 (355)
T cd03819 351 SYDRM 355 (355)
T ss_pred hhccC
Confidence 99853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=288.96 Aligned_cols=349 Identities=21% Similarity=0.253 Sum_probs=243.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+.+|+|. .||.+.++.+|+++|.++||+|++++.......... ...+.++.
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999999886 899999999999999999999999997643221100 01122222
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+.. +.. ... ...... ....++ +.. .+||+| |+|............
T Consensus 57 ~~~~--~~~---------~~~-------~~~~~~-------~~~~~~-~~~-------~~~Dii-~~~~~~~~~~~~~~~ 102 (357)
T cd03795 57 RAPS--LLN---------VAS-------TPFSPS-------FFKQLK-KLA-------KKADVI-HLHFPNPLADLALLL 102 (357)
T ss_pred Eeec--ccc---------ccc-------ccccHH-------HHHHHH-hcC-------CCCCEE-EEecCcchHHHHHHH
Confidence 2211 000 000 000000 000111 111 159999 888633322211111
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
.. .+.|+++++|+...... . .......+++..++.+|.++++|+.+
T Consensus 103 ~~-------~~~~~i~~~h~~~~~~~--------------~-------------~~~~~~~~~~~~~~~~d~vi~~s~~~ 148 (357)
T cd03795 103 LP-------RKKPVVVHWHSDIVKQK--------------L-------------LLKLYRPLQRRFLRRADAIVATSPNY 148 (357)
T ss_pred hc-------cCceEEEEEcChhhccc--------------h-------------hhhhhhHHHHHHHHhcCEEEeCcHHH
Confidence 11 47899999996322110 0 00112245567889999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.....+ . . ++.+||||+|...+.+.... .. .....+ .+.++|+|
T Consensus 149 ~~~~~~~~~~--~-~------~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~i~~ 196 (357)
T cd03795 149 AETSPVLRRF--R-D------KVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPFFLF 196 (357)
T ss_pred HHHHHHhcCC--c-c------ceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcEEEE
Confidence 9987652111 1 2 88999999999887654310 00 111222 34589999
Q ss_pred EeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEeecChHHHHHHHHhCcEEEecCC
Q 007300 406 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
+||+.+.||++.+++|++++. +++|+|+|+|+ ....++++..+. ..++.+.+..+.+++..+++.||++++||.
T Consensus 197 ~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 197 VGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred ecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 999999999999999999996 89999999987 556666666443 357888877788888899999999999996
Q ss_pred --CCCCcHHHHHHHHcCCceEEcCCCCccccccc-CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 484 --FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 484 --~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~-~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
.|+||++++|||++|+|||+++.++..+.+.+ +.+|+++ +++|+++++++|.+++++ ++.+.+|+
T Consensus 273 ~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~~~~ 340 (357)
T cd03795 273 ERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRERLG 340 (357)
T ss_pred ccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHHHHH
Confidence 49999999999999999999999999999886 8999987 999999999999999998 55555555
Q ss_pred HHH---HHhhCCchHHH
Q 007300 561 KNG---MAQDLSWKGPA 574 (609)
Q Consensus 561 ~~~---~~~~fs~~~~a 574 (609)
+++ +.+.|||+.++
T Consensus 341 ~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 341 EAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHhcchHhhC
Confidence 554 67899999764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=285.38 Aligned_cols=357 Identities=18% Similarity=0.213 Sum_probs=245.2
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||+++++.++| ...||.+.++.+|+++|+++||+|+++++............. ........ .
T Consensus 1 kIl~i~~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~------------~~~~~~~~-----~ 62 (359)
T cd03823 1 RILVVNHLYPP-RSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIG------------VVVYGRPI-----D 62 (359)
T ss_pred CeeEEcccCCc-ccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccccccc------------ceeecccc-----c
Confidence 79999999877 456999999999999999999999999987443222100000 00000000 0
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
......... ..+ .........+.....+.++.. +||+| |+|.+........ .
T Consensus 63 ~~~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~~~~~~----------~~dii-~~~~~~~~~~~~~-~ 114 (359)
T cd03823 63 EVLRSALPR--------DLF--------HLSDYDNPAVVAEFARLLEDF----------RPDVV-HFHHLQGLGVSIL-R 114 (359)
T ss_pred cccCCCchh--------hhh--------HHHhccCHHHHHHHHHHHHHc----------CCCEE-EECCccchHHHHH-H
Confidence 000000000 000 000000011223333333333 59999 8887633322222 2
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
...+ .++|+++++|+....... ........|.++++|+..
T Consensus 115 ~~~~-----~~~~~i~~~hd~~~~~~~-----------------------------------~~~~~~~~d~ii~~s~~~ 154 (359)
T cd03823 115 AARD-----RGIPIVLTLHDYWLICPR-----------------------------------QGLFKKGGDAVIAPSRFL 154 (359)
T ss_pred HHHh-----cCCCEEEEEeeeeeecch-----------------------------------hhhhccCCCEEEEeCHHH
Confidence 1111 479999999964321000 000112239999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.+ ++... .++.+|+||+|...+.+... +. ..+.++|+|
T Consensus 155 ~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~i~~ 196 (359)
T cd03823 155 LDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLRFGF 196 (359)
T ss_pred HHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CC--CCCceEEEE
Confidence 999886 33322 28999999999887755421 11 124578999
Q ss_pred EeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCC-C
Q 007300 406 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR-F 484 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~-~ 484 (609)
+|++.+.||++.+++++..+.+++++|+++|.+.......... ....++.+.+..+.+++..+++.||++++||. .
T Consensus 197 ~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 197 IGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred EecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 9999999999999999999976789999999987433222221 34456888777788888899999999999998 5
Q ss_pred CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007300 485 EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 564 (609)
Q Consensus 485 E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 564 (609)
|++|++++|||++|+|||+++.++..|++.++.+|+++ +++|+++++++|.+++++ ++.+.++++++.
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~~~~ 341 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRAGIE 341 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHhHH
Confidence 99999999999999999999999999999999999987 999999999999999997 677777777654
Q ss_pred HhhCCchHHHHHHHHHHH
Q 007300 565 AQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 565 ~~~fs~~~~a~~~~~~~~ 582 (609)
+.++.+.++++|+++|+
T Consensus 342 -~~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 342 -PPRSIEDQAEEYLKLYR 358 (359)
T ss_pred -HhhhHHHHHHHHHHHhh
Confidence 33455999999999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=285.80 Aligned_cols=383 Identities=20% Similarity=0.207 Sum_probs=259.1
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998775 499999999999999999999999997643222110000 111223456665
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccc-cchHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWH-TSLIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~-~~~~~~~l 244 (609)
.+........ . +.....++..+.......... .. .+||+| |+|.+. ....+...
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~-------~~~D~v-~~~~~~~~~~~~~~~ 118 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RR-------RRPDVI-IATSPPLLIALAALL 118 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-cc-------cCCCEE-EEcCChHHHHHHHHH
Confidence 5532211110 0 111122222233333333221 11 169999 887522 22222222
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
.... .++|+++++|+..+....... ...... ........+++..+..+|.++++|+.
T Consensus 119 ~~~~------~~~~~i~~~h~~~~~~~~~~~-----~~~~~~------------~~~~~~~~~~~~~~~~~d~vi~~s~~ 175 (394)
T cd03794 119 LARL------KGAPFVLEVRDLWPESAVALG-----LLKNGS------------LLYRLLRKLERLIYRRADAIVVISPG 175 (394)
T ss_pred HHHh------cCCCEEEEehhhcchhHHHcc-----Cccccc------------hHHHHHHHHHHHHHhcCCEEEEECHH
Confidence 2221 489999999975432111100 000000 00011234457778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.++.+.. ++.... ++.+||||+|...+.+.... .. +..... ..+.++|+
T Consensus 176 ~~~~~~~---~~~~~~------~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~~~i~ 224 (394)
T cd03794 176 MREYLVR---RGVPPE------KISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDKFVVL 224 (394)
T ss_pred HHHHHHh---cCCCcC------ceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCcEEEE
Confidence 9999873 333333 89999999998877655321 01 222222 23558999
Q ss_pred EEeccccccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHHHHh-CCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
|+|++.+.||++.+++++.++.+. +++|+|+|+|. ..+.+.++... ...++.+.+..+.+++..+|+.||++++|+
T Consensus 225 ~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~ 302 (394)
T cd03794 225 YAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPL 302 (394)
T ss_pred EecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEec
Confidence 999999999999999999999764 89999999987 44445554332 224688877778888889999999999999
Q ss_pred CCCCC-----cHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007300 483 RFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 557 (609)
Q Consensus 483 ~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 557 (609)
..|++ |++++|||++|+|||+++.++..+++.++.+|+++ +++|+++++++|.+++.+ ++.+.
T Consensus 303 ~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~ 370 (394)
T cd03794 303 KPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PEERA 370 (394)
T ss_pred cCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 98875 88899999999999999999999999998999987 889999999999999977 55556
Q ss_pred HHHHHH---HHhhCCchHHHHHHH
Q 007300 558 EMMKNG---MAQDLSWKGPAKKWE 578 (609)
Q Consensus 558 ~~~~~~---~~~~fs~~~~a~~~~ 578 (609)
++++++ ..++|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 665554 467999999999873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=305.34 Aligned_cols=283 Identities=14% Similarity=0.142 Sum_probs=201.5
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEE-EEecCccCCccccccccccCCccccccccccccCCCCCcCCc
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 303 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~-~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 303 (609)
+|||| |+|.....++..+.... .++|+|+ +.|+... .. . +..+ ..
T Consensus 400 kpDIV-H~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~~-~---------~~~~---------------~~ 445 (694)
T PRK15179 400 VPSVV-HIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-VD-R---------PDRY---------------RV 445 (694)
T ss_pred CCcEE-EEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-cc-c---------hhHH---------------HH
Confidence 59999 99987776666555543 4788876 5564321 00 0 0000 00
Q ss_pred hhHHHHHHhh--cCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccc
Q 007300 304 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 381 (609)
Q Consensus 304 ~~~~~k~~~~--~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~ 381 (609)
........+. .++.++++|...++.+.+ .+|++.+ ++.+||||+|...|.+....
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~--------------- 502 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC--------------- 502 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCchh---------------
Confidence 0011111222 345667777777777764 2465555 89999999998877653210
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--Cce
Q 007300 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 457 (609)
Q Consensus 382 ~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v 457 (609)
+. .+..+......+.++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ ++|
T Consensus 503 ---~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 503 ---TA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 11 1111221112345799999999999999999999998865 689999999997 6677777777655 456
Q ss_pred EEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCC-
Q 007300 458 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 536 (609)
Q Consensus 458 ~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d- 536 (609)
.+.+ +. +++..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++|
T Consensus 577 ~flG-~~-~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTG-LS-RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcC-Cc-chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 5544 44 346679999999999999999999999999999999999999999999999999987 7766
Q ss_pred -HHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 537 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 537 -~~~la~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
+++++++|.+++.+.. .+.+.+.+++.+.++|||+.++++|+++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887532 244555555556789999999999999995
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=281.40 Aligned_cols=341 Identities=21% Similarity=0.224 Sum_probs=246.1
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..|+| |.+.++.+++.+|.++||+|+|+++.........+. .
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~-----------------~---------- 48 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE-----------------D---------- 48 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc-----------------c----------
Confidence 79999998644 367899999999999999999999874322110000 0
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
...+.... |......+..+...+...++.. ++|+| |+|..........+.
T Consensus 49 -~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~----------~~Dii-~~~~~~~~~~~~~~~ 98 (355)
T cd03799 49 -RAELARTR------------------YLARSLALLAQALVLARELRRL----------GIDHI-HAHFGTTPATVAMLA 98 (355)
T ss_pred -cccccchH------------------HHHHHHHHHHHHHHHHHHHHhc----------CCCEE-EECCCCchHHHHHHH
Confidence 00000000 0001111111112222222222 59999 998765544444443
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
... .+.|+++++|+...... ....+++..++.+|.++++|+..
T Consensus 99 ~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s~~~ 141 (355)
T cd03799 99 SRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAISEYN 141 (355)
T ss_pred HHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECCHHH
Confidence 332 47899999995332100 01145677788999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
++.+.+. ++.... ++.+|+||+|.+.+.+... ....+.+.|+|
T Consensus 142 ~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~-----------------------------~~~~~~~~i~~ 184 (355)
T cd03799 142 RQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP-----------------------------PPPGEPLRILS 184 (355)
T ss_pred HHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc-----------------------------cccCCCeEEEE
Confidence 9999863 244333 8999999999887765420 01124578999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEeecChHHHHHHHHhCcEEEec
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
+|++.+.||++.+++++.++.+ ++++|+++|.++ ....++++..++ +.++.+.+..+.+++..+|+.||++++|
T Consensus 185 ~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~ 262 (355)
T cd03799 185 VGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLP 262 (355)
T ss_pred EeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEec
Confidence 9999999999999999999876 589999999987 445555555543 3568887777888888999999999999
Q ss_pred CCC------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHH
Q 007300 482 SRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 555 (609)
Q Consensus 482 S~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 555 (609)
|.. |++|++++|||++|+|||+++.|+..+++.++.+|+++ +++|+++++++|.+++++ ++.
T Consensus 263 s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~ 330 (355)
T cd03799 263 SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD--PEL 330 (355)
T ss_pred ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHH
Confidence 999 99999999999999999999999999999999999987 889999999999999987 555
Q ss_pred HHHHHHHH---HHhhCCchHHHHH
Q 007300 556 LAEMMKNG---MAQDLSWKGPAKK 576 (609)
Q Consensus 556 ~~~~~~~~---~~~~fs~~~~a~~ 576 (609)
+.++++++ +.++|||+..+++
T Consensus 331 ~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 331 RREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHhcCHHHHhhc
Confidence 66666554 5789999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=284.54 Aligned_cols=366 Identities=21% Similarity=0.242 Sum_probs=246.6
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|++.++|. .||.+.++.+|+++|+++||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999988765 899999999999999999999999998643222110000 00000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccc-ccchHHHH-
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDW-HTSLIPCY- 243 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~-~~~~~~~~- 243 (609)
......... . ....+ .+........... . .+||+| |+|+. ........
T Consensus 57 ~~~~~~~~~----------~----------~~~~~-~~~~~~~~~~~~~-~-------~~~dii-~~~~~~~~~~~~~~~ 106 (375)
T cd03821 57 LFSINVAYG----------L----------NLARY-LFPPSLLAWLRLN-I-------READIV-HVHGLWSYPSLAAAR 106 (375)
T ss_pred ecccchhhh----------h----------hhhhh-ccChhHHHHHHHh-C-------CCCCEE-EEecccchHHHHHHH
Confidence 000000000 0 00000 0000011111111 1 158999 88873 32222222
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+... .++|++++.|+......... ..+.. . .......+..+..++.++++|.
T Consensus 107 ~~~~-------~~~~~i~~~~~~~~~~~~~~---------~~~~~----------~--~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 107 AARK-------YGIPYVVSPHGMLDPWALPH---------KALKK----------R--LAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred HHHH-------hCCCEEEEcccccccccccc---------chhhh----------H--HHHHHHHHHHHhcCCEEEECCH
Confidence 2211 48999999996532111000 00000 0 0012234556778999999998
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
......... + . ..++.+||||+|...+.+... ... ++..+.+ .+.++|
T Consensus 159 ~~~~~~~~~---~-~------~~~~~vi~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~~i 206 (375)
T cd03821 159 QEAAEIRRL---G-L------KAPIAVIPNGVDIPPFAALPS-------------------RGR-RRKFPIL--PDKRII 206 (375)
T ss_pred HHHHHHHhh---C-C------cccEEEcCCCcChhccCcchh-------------------hhh-hhhccCC--CCCcEE
Confidence 877776641 1 1 228999999999988866431 111 4445544 355899
Q ss_pred EEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEeecChHHHHHHHHhCcEEE
Q 007300 404 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
+|+||+.+.||++.+++|+.++.+ ++++|+++|.+.......++.+..++ ..++.+.+..+.+++..+|+.||+++
T Consensus 207 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 286 (375)
T cd03821 207 LFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFV 286 (375)
T ss_pred EEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEE
Confidence 999999999999999999999977 69999999998766666666654443 35677777778788888999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
+||..|+||++++|||++|+|||+++.+|..+++.+ .+|++. +.+.++++++|.+++++ ++.+.++
T Consensus 287 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~~~ 352 (375)
T cd03821 287 LPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLKAM 352 (375)
T ss_pred eccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHHHH
Confidence 999999999999999999999999999999999998 788874 55669999999999998 4455555
Q ss_pred HHH---HHHhhCCchHHHHHHHH
Q 007300 560 MKN---GMAQDLSWKGPAKKWEE 579 (609)
Q Consensus 560 ~~~---~~~~~fs~~~~a~~~~~ 579 (609)
+++ .+.++|||+.++++|++
T Consensus 353 ~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 353 GENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHhcCHHHHHHHhhC
Confidence 544 45899999999999863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=281.44 Aligned_cols=365 Identities=23% Similarity=0.297 Sum_probs=252.5
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..|+|. .||.+..+..++++|.++||+|+++++........... .++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 799999998886 89999999999999999999999999875433221000 000000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccc-cchHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWH-TSLIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~-~~~~~~~l 244 (609)
.+..... .+ ....+ .+.......++.. +||+| |+|... .......+
T Consensus 57 ~~~~~~~-~~--------------------~~~~~-~~~~~~~~~~~~~----------~~Div-~~~~~~~~~~~~~~~ 103 (374)
T cd03817 57 RVPTFKY-PD--------------------FRLPL-PIPRALIIILKEL----------GPDIV-HTHTPFSLGLLGLRV 103 (374)
T ss_pred ccccchh-hh--------------------hhccc-cHHHHHHHHHhhc----------CCCEE-EECCchhhhhHHHHH
Confidence 0000000 00 00000 0111122222222 59999 887532 22233333
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh-HHHHHHhhcCCEEEeeCH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTVSP 323 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~vS~ 323 (609)
... .++|+++++|+.... +. ......... ...... .+++..+..+|.++++|+
T Consensus 104 ~~~-------~~~~~i~~~~~~~~~--~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 104 ARK-------LGIPVVATYHTMYED--YT----HYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred HHH-------cCCCEEEEecCCHHH--HH----HHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEeccH
Confidence 332 589999999975320 00 000000000 000112 456778889999999999
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
..++.+.+ ++.. .++.+++||+|...+.+.. ....++.+++.. +.++|
T Consensus 158 ~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~i 205 (374)
T cd03817 158 KIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVD--------------------GDDERRKLGIPE--DEPVL 205 (374)
T ss_pred HHHHHHHh---cCCC-------CceEEcCCccchhccCccc--------------------hhHHHHhcCCCC--CCeEE
Confidence 99998875 3332 1689999999998876643 122245555543 45899
Q ss_pred EEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEeecChHHHHHHHHhCcEEE
Q 007300 404 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
+|+|++.+.||++.+++++.++.+ ++++|+++|.|+ ..+.++++..++ .+++.+.+..+.+++..+++.||+++
T Consensus 206 ~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l 283 (374)
T cd03817 206 LYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADLFV 283 (374)
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEE
Confidence 999999999999999999999876 689999999987 555666665443 35677777778888889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
+||..|++|++++|||++|+|||+++.|+..+++.++.+|+++ ++.|. +++++|.+++++ ++.+++|
T Consensus 284 ~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~~~~ 350 (374)
T cd03817 284 FASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELRRRL 350 (374)
T ss_pred ecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHHHHH
Confidence 9999999999999999999999999999999999999999987 77777 999999999998 5555666
Q ss_pred HHHHH--HhhCCchHHHHHHHHHHHH
Q 007300 560 MKNGM--AQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 560 ~~~~~--~~~fs~~~~a~~~~~~~~~ 583 (609)
++++. .++++ .+++++++|++
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHhc
Confidence 66653 33444 67778877765
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-32 Score=284.59 Aligned_cols=347 Identities=15% Similarity=0.112 Sum_probs=235.4
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||+++++.+ + .||.+.++.+++++|.+.||+|+++++..... .... .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999875 3 69999999999999999999999999874321 0000 0011133333
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+.... ... ..+.....+.++.. +||+| |+|......++..+.
T Consensus 57 ~~~~~~-----------------------~~~---~~~~~~~~~~~~~~----------~~Dvv-~~~~~~~~~~~~~~~ 99 (358)
T cd03812 57 YIPARK-----------------------KNP---LKYFKKLYKLIKKN----------KYDIV-HVHGSSASGFILLAA 99 (358)
T ss_pred EecCCC-----------------------ccH---HHHHHHHHHHHhcC----------CCCEE-EEeCcchhHHHHHHH
Confidence 221100 000 11122222233322 59999 998776555555444
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
... ....++++.|+..+...... . . .....+.+.....+|.++++|+..
T Consensus 100 ~~~------~~~~~v~~~~~~~~~~~~~~-------------~----------~--~~~~~~~~~~~~~~~~~i~~s~~~ 148 (358)
T cd03812 100 KKA------GVKVRIAHSHNTSDSHDKKK-------------K----------I--LKYKVLRKLINRLATDYLACSEEA 148 (358)
T ss_pred hhC------CCCeEEEEeccccccccccc-------------h----------h--hHHHHHHHHHHhcCCEEEEcCHHH
Confidence 331 23345777886443211100 0 0 000123455677899999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.+. .. +.++.+||||+|.+.+.+.... ++. +...+.. .+.++|+|
T Consensus 149 ~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~i~~ 197 (358)
T cd03812 149 GKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFVIGH 197 (358)
T ss_pred HHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEEEEE
Confidence 9988752 22 2389999999999877654321 111 3444443 35589999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEec
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .+++..+|+.||++++|
T Consensus 198 vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 198 VGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred EeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEec
Confidence 9999999999999999999976 689999999988 5556666655443 45666554 45566799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~ 561 (609)
|++|++|++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++..+.+..
T Consensus 274 s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~~~~ 340 (358)
T cd03812 274 SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERSSES 340 (358)
T ss_pred ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhhhhh
Confidence 99999999999999999999999999999999994 55544 677899999999999998 555555655
Q ss_pred HHHHhhCCchH
Q 007300 562 NGMAQDLSWKG 572 (609)
Q Consensus 562 ~~~~~~fs~~~ 572 (609)
.+..+..+++.
T Consensus 341 ~~~~~~~~~~~ 351 (358)
T cd03812 341 IKKKGLDADDE 351 (358)
T ss_pred hhhccchhhhh
Confidence 55444444443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=276.80 Aligned_cols=367 Identities=27% Similarity=0.390 Sum_probs=262.1
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 799999998775 79999999999999999999999999874432221000 000000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.. ... . ..+ .......+.......++.. +||+| |+|.+..........
T Consensus 57 ~~--~~~-~--------~~~----------~~~~~~~~~~~~~~~~~~~----------~~Dii-~~~~~~~~~~~~~~~ 104 (374)
T cd03801 57 RP--PPL-L--------RVR----------RLLLLLLLALRLRRLLRRE----------RFDVV-HAHDWLALLAAALAA 104 (374)
T ss_pred cC--Ccc-c--------ccc----------hhHHHHHHHHHHHHHhhhc----------CCcEE-EEechhHHHHHHHHH
Confidence 00 000 0 000 0001111222222223222 59999 888777665554333
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
.. .++|+++++|+..+...... .. ........+.+..+..+|.++++|+..
T Consensus 105 ~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s~~~ 155 (374)
T cd03801 105 RL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVSEAT 155 (374)
T ss_pred Hh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEecHHH
Confidence 22 68999999998655221110 00 001123345567788999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.+. ++.+.+ ++.++|||+|...+.+.. ...+.....+ .+.+.|+|
T Consensus 156 ~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~i~~ 204 (374)
T cd03801 156 REELREL--GGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPVILF 204 (374)
T ss_pred HHHHHhc--CCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeEEEE
Confidence 9999862 333222 899999999988776531 1112222222 34579999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHh--CCCceEEEeecChHHHHHHHHhCcEEEec
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
+|++...||++.+++++..+.+ ++++|+++|.+. ....++++..+ .+.++.+.+..+.+++..+++.||++++|
T Consensus 205 ~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 205 VGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred ecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEec
Confidence 9999999999999999999876 589999999776 55555555433 34567777777878888999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~ 561 (609)
+..|++|++++|||++|+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++.+ ++.+.++++
T Consensus 283 ~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~~~ 350 (374)
T cd03801 283 SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRRLGE 350 (374)
T ss_pred chhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHHHHH
Confidence 99999999999999999999999999999999999999987 999999999999999987 556666666
Q ss_pred HH---HHhhCCchHHHHHHHHHHH
Q 007300 562 NG---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 562 ~~---~~~~fs~~~~a~~~~~~~~ 582 (609)
++ ..+.|||+.+++++.++|+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 351 AARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHhcCHHHHHHHHHHhhC
Confidence 54 5899999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-32 Score=289.18 Aligned_cols=227 Identities=12% Similarity=0.171 Sum_probs=176.5
Q ss_pred cCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH--
Q 007300 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE-- 391 (609)
Q Consensus 314 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 391 (609)
.+| ++++|...++.+.+ .++++++ ++.+||||+|...|.|..+. ....+..
T Consensus 339 ~sd-~v~~s~~v~~~l~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYAD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHHH--HhCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhh
Confidence 445 66788888888765 2466666 99999999999888775321 1112222
Q ss_pred hCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHH
Q 007300 392 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPL 467 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~ 467 (609)
.+++ ++.++|+++||+.++||.+.+++++.++.+ ++++|+|+|+|+ .++.++++..+++ ++|.+.+. .++
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~D 465 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRD 465 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhh
Confidence 2333 244799999999999999999999988755 689999999997 6677777777654 45666554 345
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHH-
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR- 546 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~- 546 (609)
+..+|+.+|++|+||++|+||++++|||++|+|||+|+.||..|+|.++.+|+++ ++.|++++++++..
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA 535 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYA 535 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHH
Confidence 6679999999999999999999999999999999999999999999999999987 89998888887743
Q ss_pred --HHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007300 547 --ALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 547 --ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 583 (609)
+.+... ...+.+.+++.+.++|||+.++++|+++|..
T Consensus 536 ~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 536 EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 333211 1233444555578999999999999999964
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=278.83 Aligned_cols=349 Identities=21% Similarity=0.248 Sum_probs=239.9
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||+||+++ +|. .||.++++.+|+++|+++||+|.+++......... ..... .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~--~~~~~------------------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL--YGGEQ------------------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc--CCCcc------------------cceeee
Confidence 79999886 454 79999999999999999999999999763311110 00000 000000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH--
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY-- 243 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~-- 243 (609)
.. + +. .....+.+.++.. +||+| |+|.|.....+..
T Consensus 58 ~~-----------------~----------~~----~~~~~~~~~~~~~----------~~dii-~~~~~~~~~~~~~~~ 95 (366)
T cd03822 58 VL-----------------D----------NP----LDYRRAARAIRLS----------GPDVV-VIQHEYGIFGGEAGL 95 (366)
T ss_pred ec-----------------C----------Cc----hhHHHHHHHHhhc----------CCCEE-EEeeccccccchhhH
Confidence 00 0 00 0111122233332 59999 8877544322221
Q ss_pred -HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 244 -LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 244 -l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+....+ ..++|+|+++|+..... . ......+++..+..+|.++++|
T Consensus 96 ~~~~~~~----~~~~~~i~~~h~~~~~~------------~-----------------~~~~~~~~~~~~~~~d~ii~~s 142 (366)
T cd03822 96 YLLLLLR----GLGIPVVVTLHTVLLHE------------P-----------------RPGDRALLRLLLRRADAVIVMS 142 (366)
T ss_pred HHHHHHh----hcCCCEEEEEecCCccc------------c-----------------chhhhHHHHHHHhcCCEEEEee
Confidence 221110 15899999999751100 0 0012345577788999999997
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
....+.+... .+ ..++.+|+||+|...+.+... . +....+ .+.++
T Consensus 143 ~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~---------------------~--~~~~~~--~~~~~ 187 (366)
T cd03822 143 SELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES---------------------L--KALGGL--DGRPV 187 (366)
T ss_pred HHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh---------------------h--HhhcCC--CCCeE
Confidence 4444433321 11 128999999999776654310 0 222222 35589
Q ss_pred EEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHH-------HHHHHHhCCCceEEEee-cChHHHHHHH
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAHMII 472 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~~~l 472 (609)
|+|+|++.+.||++.+++|+.++.+ ++++|+|+|++.+..... ++++ ....++.+.+. .+.+++..+|
T Consensus 188 i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~~~~ 265 (366)
T cd03822 188 LLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELPELF 265 (366)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHHHHH
Confidence 9999999999999999999999876 589999999986433222 2232 23356888877 5778888899
Q ss_pred HhCcEEEecCCCC--CCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 473 AGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 473 ~~aDv~v~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+.||++++||.+| ++|++++|||++|+|||+++.|+ .+.+.++.+|+++ +++|+++++++|.+++++
T Consensus 266 ~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 266 SAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLLAD 334 (366)
T ss_pred hhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHHcC
Confidence 9999999999999 99999999999999999999999 7888888899987 899999999999999987
Q ss_pred hCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 551 ~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~ 582 (609)
++.+.++++++. .+.|||+.++++|.++|+
T Consensus 335 --~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 335 --PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred --hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 556666666552 344999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=282.59 Aligned_cols=360 Identities=19% Similarity=0.200 Sum_probs=251.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..+.|. ..||+++++.+|+++|+++||+|+++++.............. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAA---------------------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhc---------------------ccc-
Confidence 689999888772 489999999999999999999999999875432221100000 000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
..... +.....++.............. +||+| |+|.+..... +
T Consensus 58 -~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~----------~~Dii-~~~~~~~~~~----~ 100 (365)
T cd03809 58 -LLRLP---------------------RRLLWGLLFLLRAGDRLLLLLL----------GLDLL-HSPHNTAPLL----R 100 (365)
T ss_pred -ccccc---------------------cccccchhhHHHHHHHHHhhhc----------CCCee-eecccccCcc----c
Confidence 00000 0000011111111111122221 59999 8887665544 1
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
..++|+++++|+..+.... ..+.. ........+++..+..+|.++++|+..
T Consensus 101 --------~~~~~~i~~~hd~~~~~~~-----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s~~~ 151 (365)
T cd03809 101 --------LRGVPVVVTIHDLIPLRFP-----------EYFSP----------GFRRYFRRLLRRALRRADAIITVSEAT 151 (365)
T ss_pred --------CCCCCEEEEeccchhhhCc-----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEccHHH
Confidence 1699999999986542110 00000 001123355677889999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
++.+.+. ++.+.+ ++.+|+||+|...+.+... .. +...... .+.++|+|
T Consensus 152 ~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~--------------------~~-~~~~~~~--~~~~~i~~ 200 (365)
T cd03809 152 KRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE--------------------AE-VLRALYL--LPRPYFLY 200 (365)
T ss_pred HHHHHHH--hCcCHH------HEEeeccccCccccCCCch--------------------HH-HHHHhcC--CCCCeEEE
Confidence 9999862 333333 8999999999888765432 11 2222222 34579999
Q ss_pred EeccccccCHHHHHHHHhhcccC--CeEEEEEeCCChhhHHHHHHHH-HhCCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 406 IGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
+|++.+.||++.+++++..+.+. +++|+++|.+..........+. .....++.+.+..+.+++..+++.||++++||
T Consensus 201 ~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps 280 (365)
T cd03809 201 VGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPS 280 (365)
T ss_pred eCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccc
Confidence 99999999999999999999774 5999999987644444333321 22345688877778888889999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007300 483 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 562 (609)
Q Consensus 483 ~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~ 562 (609)
.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|+++++++|.+++.+ .+.+.+++++
T Consensus 281 ~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~~~ 346 (365)
T cd03809 281 LYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREELRER 346 (365)
T ss_pred hhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHHHHH
Confidence 999999999999999999999999999999864 57765 889999999999999887 6666666666
Q ss_pred H--HHhhCCchHHHHHHHH
Q 007300 563 G--MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 563 ~--~~~~fs~~~~a~~~~~ 579 (609)
+ ..++|||+.+++++++
T Consensus 347 ~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 347 GLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHhCCHHHHHHHHhC
Confidence 5 4688999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=283.76 Aligned_cols=372 Identities=15% Similarity=0.088 Sum_probs=238.8
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
..+|++++.. .+|....+..++++|+++||+|+|++.......+. . ....||.
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~----------------~-----~~~~~v~ 55 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE----------------I-----LSNPNIT 55 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH----------------H-----hcCCCEE
Confidence 3577888763 35667778899999999999999999763211100 0 1123566
Q ss_pred EEEEeCcc-hhhhhcCCCCCeeccCCCCCCCcchHHHHH-HHHHHHHHhhhhh-ccCCCCCCCCCCceEEEeccccc---
Q 007300 164 RVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFS-LLCQAALEAPRIL-NLNSNKYFSGPYDVVFVANDWHT--- 237 (609)
Q Consensus 164 ~~~v~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~~~pDvV~h~h~~~~--- 237 (609)
++.+..+. ... ......++. .........++.+ .. .+||+| |+|....
T Consensus 56 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~Dvi-~~~~~~~~~~ 109 (415)
T cd03816 56 IHPLPPPPQRLN------------------KLPFLLFAPLKVLWQFFSLLWLLYKL-------RPADYI-LIQNPPSIPT 109 (415)
T ss_pred EEECCCCccccc------------------cchHHHHHHHHHHHHHHHHHHHHHhc-------CCCCEE-EEeCCCCchH
Confidence 66654321 000 001111111 1111112221111 11 159999 8875332
Q ss_pred chHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCE
Q 007300 238 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 317 (609)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 317 (609)
..++.+++.. .++|+|+++|+..+. .. ..+... ..++......+++..++.+|.
T Consensus 110 ~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~~------------~~~~~~~~~~~e~~~~~~ad~ 163 (415)
T cd03816 110 LLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLGE------------NHPLVRLAKWYEKLFGRLADY 163 (415)
T ss_pred HHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccCC------------CCHHHHHHHHHHHHHhhcCCE
Confidence 2223333333 589999999975321 00 000000 000001122334566788999
Q ss_pred EEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH-------
Q 007300 318 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA------- 390 (609)
Q Consensus 318 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 390 (609)
|+++|+.+++.+.+ ++.+.+ ++.+||||. ...|.|.... .....+.+
T Consensus 164 ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~~~~ 217 (415)
T cd03816 164 NLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKTFLT 217 (415)
T ss_pred eeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhccccccc
Confidence 99999999999985 455444 999999994 4556554310 00111111
Q ss_pred ------HhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--------CCeEEEEEeCCChhhHHHHHHHHHhCC-C
Q 007300 391 ------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILYP-E 455 (609)
Q Consensus 391 ------~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--------~~~~lvivG~g~~~~~~~l~~l~~~~~-~ 455 (609)
..++.. ++..+++++||+.+.||++.|++|+..+.+ ++++|+|+|+|+ .++.++++..+++ .
T Consensus 218 ~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~~l~ 294 (415)
T cd03816 218 RELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKELKLK 294 (415)
T ss_pred cccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHcCCC
Confidence 112222 234678899999999999999999999853 479999999998 5677777776655 2
Q ss_pred ceEEEee-cChHHHHHHHHhCcEEEecCC---CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEeccccccccc
Q 007300 456 KARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 531 (609)
Q Consensus 456 ~v~~~~~-~~~~~~~~~l~~aDv~v~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~ 531 (609)
++.++.+ .+.+++..+|+.||++++|+. .|++|++++|||+||+|||+++.||..|+++++.+|+++
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv--------- 365 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF--------- 365 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE---------
Confidence 4666654 477888899999999997533 478999999999999999999999999999999999975
Q ss_pred CCCCCHHHHHHHHHHHHHhh-CHHHHHHHHHHHH-HhhCCchHHHH
Q 007300 532 VDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGPAK 575 (609)
Q Consensus 532 v~~~d~~~la~~I~~ll~~~-~~~~~~~~~~~~~-~~~fs~~~~a~ 575 (609)
+|+++++++|.+++++. .++.+.+|++++. ...++|...-+
T Consensus 366 ---~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~ 408 (415)
T cd03816 366 ---GDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWD 408 (415)
T ss_pred ---CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHH
Confidence 38999999999999862 1566778877764 23455554433
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=284.98 Aligned_cols=230 Identities=14% Similarity=0.107 Sum_probs=180.8
Q ss_pred HHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHH
Q 007300 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 387 (609)
Q Consensus 308 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (609)
++.....+|.|+++|++.++.+.+. ++.+ + ++.+|+||+|...+.....
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~--~~~~-~------~i~vvyp~vd~~~~~~~~~---------------------- 262 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEAL--WRIP-E------RIKRVYPPCDTSGLQALPL---------------------- 262 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHH--cCCC-C------CeEEEcCCCCHHHcccCCc----------------------
Confidence 3445578999999999999999762 2221 2 7889999998765532110
Q ss_pred HHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hhhHHHHHHHHHhCC--C
Q 007300 388 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--E 455 (609)
Q Consensus 388 ~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~~--~ 455 (609)
....+.+.++++||++++||++.+++|+.++.+ ++++|+|+|++. ..+.+.++++..+++ +
T Consensus 263 -------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~ 335 (463)
T PLN02949 263 -------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDG 335 (463)
T ss_pred -------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCC
Confidence 011234789999999999999999999998643 579999999874 234567777777653 5
Q ss_pred ceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc-ccccc---CcceeEeccccccccc
Q 007300 456 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEA 531 (609)
Q Consensus 456 ~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~i~~---~~~G~l~~~~~~~~~~ 531 (609)
++.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 336 ~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~--------- 406 (463)
T PLN02949 336 DVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA--------- 406 (463)
T ss_pred cEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC---------
Confidence 6888887788888899999999999999999999999999999999999999975 67765 6789964
Q ss_pred CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHcC
Q 007300 532 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 532 v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
.|+++++++|.+++++. ++.+.+|++++. .++|||+.++++|++.|.++++.+
T Consensus 407 ---~~~~~la~ai~~ll~~~-~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 ---TTVEEYADAILEVLRMR-ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred ---CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 49999999999999851 344445554442 367999999999999999988654
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=272.80 Aligned_cols=372 Identities=23% Similarity=0.306 Sum_probs=258.9
Q ss_pred EEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEEE
Q 007300 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (609)
Q Consensus 87 Il~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (609)
|+++++.++| ...||.+.++..++.+|.+.||+|+++++............... . ....
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-----------------~---~~~~ 59 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL-----------------V---GVER 59 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc-----------------c---cccc
Confidence 6788888655 23599999999999999999999999998643322210000000 0 0000
Q ss_pred EeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccccc-chHHHHHH
Q 007300 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHT-SLIPCYLK 245 (609)
Q Consensus 167 v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~-~~~~~~l~ 245 (609)
...... ... ..........+.......++.. . .+||+| |+|.... ..+...+.
T Consensus 60 ~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~l~~~-~-------~~~dii-~~~~~~~~~~~~~~~~ 113 (377)
T cd03798 60 LPVLLP-----------VVP------LLKGPLLYLLAARALLKLLKLK-R-------FRPDLI-HAHFAYPDGFAAALLK 113 (377)
T ss_pred cccCcc-----------hhh------ccccchhHHHHHHHHHHHHhcc-c-------CCCCEE-EEeccchHHHHHHHHH
Confidence 000000 000 0011112223333344444311 1 159999 7774322 33333333
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
.. .++|+++++|+..+..... .......++..+..+|.++++|+..
T Consensus 114 ~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 114 RK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred Hh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCCHHH
Confidence 32 4789999999755421100 0013456677889999999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
++.+.+ .+.. ..++.+++||+|...+.+.... .. ...+.. .+.+.+++
T Consensus 160 ~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~~---~~~~~~--~~~~~i~~ 207 (377)
T cd03798 160 ADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------EA---RKLGLP--EDKKVILF 207 (377)
T ss_pred HHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------HH---HhccCC--CCceEEEE
Confidence 999986 2222 2389999999999888765321 00 222222 35589999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEeecChHHHHHHHHhCcEEEec
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILIP 481 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDv~v~p 481 (609)
+|++.+.||++.+++++..+.+ ++++|+++|.+. ..+.++++..+. ..++.+.+..+.+++..+++.||++++|
T Consensus 208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~ 285 (377)
T cd03798 208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLP 285 (377)
T ss_pred eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecc
Confidence 9999999999999999999976 589999999987 344555554433 3467777777888888999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~ 561 (609)
|..|++|++++|||++|+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++++... .+.+.++
T Consensus 286 ~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~~~~ 354 (377)
T cd03798 286 SLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGRAAR 354 (377)
T ss_pred hhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhHHHH
Confidence 99999999999999999999999999999999999999987 999999999999999998433 3344444
Q ss_pred HHHHhhCCchHHHHHHHHHHHHH
Q 007300 562 NGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 562 ~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
..+.+.|||+..++++.++|+++
T Consensus 355 ~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 355 RRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHhhHHHHHHHHHHHHhhC
Confidence 55689999999999999999764
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=282.14 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=172.9
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
+++..++.+|.++++|++.++.+.+. ++.. .++.+|+||+|++.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~~-------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKRN-------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCcC-------CCcEEEcCCCCHHHhccccc---------------------
Confidence 45667889999999999999998862 2211 27899999999877654321
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C-----CeEEEEEeCCCh----hhHHHHHHHHHhCC-
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILYP- 454 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~~- 454 (609)
....+.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+.++++..+++
T Consensus 232 --------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 --------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred --------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 011245799999999999999999999999865 2 599999998742 36677777777653
Q ss_pred -CceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCc-ccccc---cCcceeEeccccccc
Q 007300 455 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 529 (609)
Q Consensus 455 -~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~i~---~~~~G~l~~~~~~~~ 529 (609)
++|.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 5788888888888899999999999999999999999999999999999999875 47887 79999985
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCHHHHHHH--HHHHHHhhCCchHHHH
Q 007300 530 EAVDPVDVAAVSTTVRRALATYGTQALAEM--MKNGMAQDLSWKGPAK 575 (609)
Q Consensus 530 ~~v~~~d~~~la~~I~~ll~~~~~~~~~~~--~~~~~~~~fs~~~~a~ 575 (609)
.|+++++++|.++++++ ......+ +++...++|||+.+.+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 39999999999999873 2222223 2233578899998753
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=293.11 Aligned_cols=287 Identities=17% Similarity=0.205 Sum_probs=214.9
Q ss_pred CCceEEEecccc-cchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCc
Q 007300 225 PYDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 303 (609)
Q Consensus 225 ~pDvV~h~h~~~-~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 303 (609)
++||| |+|... .+++...++.. .++|+|++.|++....+... +....+.... +.+.+...
T Consensus 173 ~~dvi-H~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~~--~~~~~~~~~~---------~~~~~~~~ 233 (475)
T cd03813 173 KADVY-HAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKIE--LLQADWEMSY---------FRRLWIRF 233 (475)
T ss_pred CCCEE-eccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHHH--HHhcccchHH---------HHHHHHHH
Confidence 57999 999643 23344444443 58999999997543211100 0000000000 00000001
Q ss_pred hhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchH
Q 007300 304 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 383 (609)
Q Consensus 304 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 383 (609)
...+.+..++.||.|+++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.+....
T Consensus 234 ~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~----------------- 287 (475)
T cd03813 234 FESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA----------------- 287 (475)
T ss_pred HHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc-----------------
Confidence 1233466788999999999999988765 566655 89999999999888765310
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCC--hhhHHHHHHHHHhCC--Cce
Q 007300 384 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EKA 457 (609)
Q Consensus 384 ~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~~v 457 (609)
. ...+.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+++ +.+.+.++++..+++ ++|
T Consensus 288 ---------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V 356 (475)
T cd03813 288 ---------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNV 356 (475)
T ss_pred ---------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeE
Confidence 0 12355899999999999999999999999875 689999999984 457778888877654 467
Q ss_pred EEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc------CcceeEeccccccccc
Q 007300 458 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEA 531 (609)
Q Consensus 458 ~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~------~~~G~l~~~~~~~~~~ 531 (609)
.+.+ .+.+..+|+.+|++++||..|+||++++|||+||+|||+|+.||..|++.+ |.+|+++
T Consensus 357 ~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv--------- 424 (475)
T cd03813 357 KFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV--------- 424 (475)
T ss_pred EEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE---------
Confidence 7766 445667999999999999999999999999999999999999999999998 6799987
Q ss_pred CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007300 532 VDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 532 v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 582 (609)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 -~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 -PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred -CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 55555555544 5788999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=270.29 Aligned_cols=340 Identities=22% Similarity=0.227 Sum_probs=235.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..+.| .||.+.++..|+++|.++||+|++++..... ...+. ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 79999988765 6999999999999999999999999987443 11000 01122222
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+...... . ..........+.+.++.. +||+| ++|.+. ...++.
T Consensus 56 ~~~~~~~~-~---------------------~~~~~~~~~~~~~~l~~~----------~~d~i-~~~~~~---~~~~~~ 99 (348)
T cd03820 56 DLGDKRDS-K---------------------LLARFKKLRRLRKLLKNN----------KPDVV-ISFLTS---LLTFLA 99 (348)
T ss_pred eccccccc-c---------------------hhccccchHHHHHhhccc----------CCCEE-EEcCch---HHHHHH
Confidence 22111000 0 000001112222222222 59999 887655 222222
Q ss_pred HhhcCCCcccC-ceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 246 TMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 246 ~~~~~~~~~~~-~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
... .+ .|++++.|+........ .......+..++.+|.++++|+.
T Consensus 100 ~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~s~~ 145 (348)
T cd03820 100 SLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVLTEE 145 (348)
T ss_pred HHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEeCHH
Confidence 221 23 49999999643211000 00112367788999999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.+.... ... ..++.+|+||+|...+.+. ...+.+.++
T Consensus 146 ~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~--------------------------------~~~~~~~i~ 182 (348)
T cd03820 146 DRALYY-----KKF------NKNVVVIPNPLPFPPEEPS--------------------------------SDLKSKRIL 182 (348)
T ss_pred HHHHhh-----ccC------CCCeEEecCCcChhhcccc--------------------------------CCCCCcEEE
Confidence 973222 112 2289999999998765432 012457999
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
|+|++.+.||++.++++++.+.+ ++++|+|+|++. ....++++..+.+ .++.+.+. .+++..+|+.||++++
T Consensus 183 ~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ 258 (348)
T cd03820 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVL 258 (348)
T ss_pred EEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEe
Confidence 99999999999999999999974 789999999987 4455555555543 34444433 5667789999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCC-CcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
||.+|++|++++|||++|+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+.++
T Consensus 259 ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~~~~ 326 (348)
T cd03820 259 TSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELRKRM 326 (348)
T ss_pred CccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHHH
Confidence 999999999999999999999999975 456777777799987 999999999999999987 6666666
Q ss_pred HHHH--HHhhCCchHHHHHHHH
Q 007300 560 MKNG--MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 560 ~~~~--~~~~fs~~~~a~~~~~ 579 (609)
++++ +.++|+|+.++++|.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 327 GANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHhCHHHHHHHhcC
Confidence 6665 5688999999999863
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-30 Score=268.58 Aligned_cols=352 Identities=20% Similarity=0.222 Sum_probs=244.5
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|+.. .||...++..|+++|.++||+|+++++...... .....|++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999876 488999999999999999999999997633211 1112344444
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+...... . ...+.......+.+.++.. +||+| |+|.+....+..+..
T Consensus 52 ~~~~~~~~--------------------~-~~~~~~~~~~~~~~~~~~~----------~~dvv-~~~~~~~~~~~~~~~ 99 (359)
T cd03808 52 PIPLDRRG--------------------I-NPFKDLKALLRLYRLLRKE----------RPDIV-HTHTPKPGILGRLAA 99 (359)
T ss_pred eccccccc--------------------c-ChHhHHHHHHHHHHHHHhc----------CCCEE-EEccccchhHHHHHH
Confidence 44211100 0 0001111122223333333 59999 998766665555554
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
... ...++++++|+..+..... .+ .........+..+..+|.++++|+..
T Consensus 100 ~~~------~~~~~i~~~~~~~~~~~~~-----------~~-------------~~~~~~~~~~~~~~~~d~ii~~s~~~ 149 (359)
T cd03808 100 RLA------GVPKVIYTVHGLGFVFTSG-----------GL-------------KRRLYLLLERLALRFTDKVIFQNEDD 149 (359)
T ss_pred HHc------CCCCEEEEecCcchhhccc-----------hh-------------HHHHHHHHHHHHHhhccEEEEcCHHH
Confidence 422 4678888888654311100 00 00112234566788899999999999
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+.+ .+... ....+.+++||+|...+.+.... ...+.+.|+|
T Consensus 150 ~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~i~~ 193 (359)
T cd03808 150 RDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPVFLF 193 (359)
T ss_pred HHHHHH---hcCCC----cCceEEecCCCCChhhcCccccc-----------------------------cCCCCcEEEE
Confidence 999986 22211 02267788999998877654210 1125589999
Q ss_pred EeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH-hCCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 406 IGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 406 iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
+|++.+.||++.+++++..+.+ ++++|+|+|.+..........+.. ....++.+.+. .+++..+|+.||++++||
T Consensus 194 ~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 194 VARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred EeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEecC
Confidence 9999999999999999999874 689999999987432222111111 12345665554 455678999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007300 483 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 562 (609)
Q Consensus 483 ~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~ 562 (609)
..|++|++++|||++|+|||+++.++..|++.++.+|+++ +++|+++++++|.+++.+ ++.+.+++++
T Consensus 272 ~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~~~ 339 (359)
T cd03808 272 YREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMGQA 339 (359)
T ss_pred cccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 999999999999999987 5555555555
Q ss_pred H---HHhhCCchHHHHHHH
Q 007300 563 G---MAQDLSWKGPAKKWE 578 (609)
Q Consensus 563 ~---~~~~fs~~~~a~~~~ 578 (609)
+ +.++|||+.++++|+
T Consensus 340 ~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 340 ARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhcCHHHHHHHhh
Confidence 4 578999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-32 Score=270.75 Aligned_cols=235 Identities=40% Similarity=0.684 Sum_probs=175.6
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCC-ceEEE--------EEeCCEEeeEEEEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (609)
||++|+.|++|+.++||+|+++..|+++|+++||+|+|++|.|+...+.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999776664311 11111 22221 15678888
Q ss_pred eeEcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccc
Q 007300 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWH 236 (609)
Q Consensus 157 ~~~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~ 236 (609)
...+||++++++++.++.+ ..+|++. +.+|.++..||.+|+++++++++.+++. |||| |+|||+
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~~--------pDII-H~hDW~ 143 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGWK--------PDII-HCHDWH 143 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-S---------SEE-EEECGG
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCCC--------CCEE-EecCch
Confidence 8899999999999998876 5699876 7789999999999999999999997654 9999 999999
Q ss_pred cchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCC
Q 007300 237 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 316 (609)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 316 (609)
++++|.+++..++..+.+.++|+++||||+.+||.++...+..+++|......... ......+++++.++..||
T Consensus 144 tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~------~~~~~~in~lk~gi~~AD 217 (245)
T PF08323_consen 144 TALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDE------YEFYGQINFLKAGIVYAD 217 (245)
T ss_dssp GTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTT------TEETTEEEHHHHHHHHSS
T ss_pred HHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccc------cccccccCHHHHHHHhcC
Confidence 99999999998877777789999999999999999998888888888654322211 112347899999999999
Q ss_pred EEEeeCHHHHHHHhcccCCCccchhhhc
Q 007300 317 MVLTVSPHYAQELVSGEDKGVELDNIIR 344 (609)
Q Consensus 317 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~ 344 (609)
.|+|||+.|++++.+ ..+|..++++++
T Consensus 218 ~v~TVS~~Ya~Ei~~-~~~g~GL~~~l~ 244 (245)
T PF08323_consen 218 KVTTVSPTYAREIQT-PEFGEGLEGLLR 244 (245)
T ss_dssp EEEESSHHHHHHTTS-HHHHTT-HHHHH
T ss_pred EeeeCCHHHHHHHhC-cccCCChHHHhc
Confidence 999999999999997 344555555443
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=278.86 Aligned_cols=222 Identities=15% Similarity=0.125 Sum_probs=168.1
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.|....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCccc-------------------
Confidence 456778899999999999999998752 22222 289999999999988765311
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHH----HHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEE
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 459 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll----~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 459 (609)
.... ..+.++|+|+|++.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 0001 12447899999999999999988 44555543 7899999999873 245555433 34666
Q ss_pred EeecChHHHHHHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHH
Q 007300 460 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 460 ~~~~~~~~~~~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
.+..+ ++..+|+.||++|+||+. |++|++++|||+||+|||+|+.++. .+..++.+|+++ + +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe----------C-CCHH
Confidence 65544 356799999999999985 9999999999999999999997542 333345678865 5 8999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHH
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~ 582 (609)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|.
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999987 55555565554 5689999999999999885
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=268.65 Aligned_cols=447 Identities=17% Similarity=0.207 Sum_probs=264.0
Q ss_pred EEeecCCccccchHHHHhhchhHHHH-hCCCeEEEEeecCCCcc-ccCCCceEE----EE---EeCCEEeeEEEEEeeEc
Q 007300 90 VGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPRYDQYK-DAWDTDVVI----EL---KVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 90 vs~~~~P~~~~GG~~~~~~~La~aL~-~~Gh~V~vit~~~~~~~-~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~ 160 (609)
++.+.. .|.||+-+++..-|+.++ +.|-+..++.|...+.. ...+..... .. ....+.-.+++-+...+
T Consensus 7 ~swEV~--NKVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVA--NKVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhh--ccCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 344443 368999999998888876 46888988888754211 111110000 00 00111234556666677
Q ss_pred CeeEEE-EeCcc-------hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhh-ccCCCCCCCCCCceEEE
Q 007300 161 GVDRVF-VDHPW-------FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYDVVFV 231 (609)
Q Consensus 161 gv~~~~-v~~~~-------~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~pDvV~h 231 (609)
|-+++. +|... +....|-..|-. ++....+| ++..-|.+.+..+++.+... .. +++||+ |
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~--s~~~~~d~-nea~~fgy~~~~~i~~~~~~~~~-------~~~dVi-H 153 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCGIG--SPEGDRET-NDAIIFGFLVAWFLGEFAEQFDD-------EPAVVA-H 153 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcCCC--CCCCCCcc-hHHHHHHHHHHHHHHHHHhhccC-------CCCeEE-E
Confidence 766664 44432 233466433311 12222333 33444666666555544433 21 368999 9
Q ss_pred ecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCcc-ccccccccCCccccccccccccC---CCCCcCCchhHH
Q 007300 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDG---YNKPVRGRKINW 307 (609)
Q Consensus 232 ~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 307 (609)
+|+|+++....+++... .++|+|+|+|.... ||. ... . ..+...+...+. ..+.-.......
T Consensus 154 ~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g------~-~~~y~~l~~~~~d~eA~~~~I~~r~~i 219 (590)
T cd03793 154 FHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAG------N-VDFYNNLDYFDVDKEAGKRGIYHRYCI 219 (590)
T ss_pred EcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccC------C-cccchhhhhcchhhhhhcccchHHHHH
Confidence 99999999999998532 68999999997765 553 111 0 111111111110 000001123346
Q ss_pred HHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchh-cccchH---
Q 007300 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAKPL--- 383 (609)
Q Consensus 308 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~-~~~~~~--- 383 (609)
++.....||.+++||+.++.++.. .++.+++ + |||||+|+..|.+..+. +++ ..++..
T Consensus 220 E~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ki~~ 281 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEKINE 281 (590)
T ss_pred HHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhhhhH
Confidence 778889999999999999999996 3677765 3 99999999998765320 000 000000
Q ss_pred -HHHHHHHHhCCCCCCCCcEEEE-Eecccc-ccCHHHHHHHHhhccc------CCe---EEEEEeCCC------------
Q 007300 384 -LKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------ENV---QIIVLGTGK------------ 439 (609)
Q Consensus 384 -~~~~~~~~~gl~~~~~~~~i~~-iGrl~~-~Kg~~~ll~a~~~l~~------~~~---~lvivG~g~------------ 439 (609)
.+..++..++++. +.++++| +||++. +||+|.||+|+++|.. .+. -|+|+=.+.
T Consensus 282 f~~~~~~~~~~~~~--d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~ 359 (590)
T cd03793 282 FVRGHFYGHYDFDL--DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQA 359 (590)
T ss_pred HHHHHHhhhcCCCC--CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchH
Confidence 1223455566643 4467777 799998 9999999999999854 222 234432210
Q ss_pred --hhhHHHHHHHHH----h-------------------------------------------------------------
Q 007300 440 --KPMEKQLEQLEI----L------------------------------------------------------------- 452 (609)
Q Consensus 440 --~~~~~~l~~l~~----~------------------------------------------------------------- 452 (609)
+.+.+.+.++.. +
T Consensus 360 ~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~ 439 (590)
T cd03793 360 VRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQ 439 (590)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhc
Confidence 011111111100 0
Q ss_pred C----CC--ceEEEeec---C----hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCc----cccccc
Q 007300 453 Y----PE--KARGVAKF---N----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEE 515 (609)
Q Consensus 453 ~----~~--~v~~~~~~---~----~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~i~~ 515 (609)
+ .+ +++++..| . +....+++++||++|+||.+|+||++.+|||+||+|+|+|+.+|+ .|++.+
T Consensus 440 l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~ 519 (590)
T cd03793 440 LFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIED 519 (590)
T ss_pred CcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhcc
Confidence 0 01 33344333 1 112346899999999999999999999999999999999999998 455544
Q ss_pred C-cceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH-HHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 516 G-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 516 ~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~-~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+ ..|+.+-..+. .-.+.++++++++|.++++....+.+...+. ....+.|+|+..++.|.+.|+.++.
T Consensus 520 ~~~~gi~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 520 PESYGIYIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred CCCceEEEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 4 35665510000 0014667888888888885421122222221 1356889999999999999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=268.53 Aligned_cols=208 Identities=16% Similarity=0.116 Sum_probs=159.4
Q ss_pred CCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCC
Q 007300 315 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 394 (609)
Q Consensus 315 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 394 (609)
||.|+++|...++ +.. . .+. ..||||.+.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq~-L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQD-LPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHHH-hcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 8999999977774 321 0 222 237999999988642 222245666
Q ss_pred CCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 395 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 395 ~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
+... +.++|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++.++.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5433 458999999999999999999998865 589999999998 6677888777766545444332 2234689
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ .+|+++++++|.+++.+.
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 45777788884 489999999999999973
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
+....+.. ...|||+.+++++++.-+
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 22222222 448999999999988653
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-28 Score=251.76 Aligned_cols=341 Identities=23% Similarity=0.248 Sum_probs=228.3
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++++..+. .||.+.++..|+++|.+.||+|.+++.............. .. .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~------------~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSN------------VK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccc------------hh-------hhcee
Confidence 7899998743 5999999999999999999999999987443221100000 00 00000
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEeccc-ccchHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDW-HTSLIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~-~~~~~~~~l 244 (609)
.... . .+ ..........+.++.. +||+| ++|.. ...++..+.
T Consensus 58 ~~~~----~---------~~-------------~~~~~~~~~~~~~~~~----------~~dii-~~~~~~~~~~~~~~~ 100 (353)
T cd03811 58 VLKL----K---------SL-------------RDLLAILRLRRLLRKE----------KPDVV-ISHLTTTPNVLALLA 100 (353)
T ss_pred eeec----c---------cc-------------cchhHHHHHHHHHHhc----------CCCEE-EEcCccchhHHHHHH
Confidence 0000 0 00 0011222233333333 49999 88876 222222222
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
.. .++|+++++|+......... .......+..+..+|.++++|+.
T Consensus 101 ~~--------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 101 AR--------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred hh--------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEeccc
Confidence 21 27899999997654211100 00013456778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.++.+.+. ++.+. .++.+|+||+|...+.+...+ . . ..+. ..+.++|+
T Consensus 146 ~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~-------------------~-~--~~~~--~~~~~~i~ 193 (353)
T cd03811 146 VKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE-------------------P-L--ELGI--PPDGPVIL 193 (353)
T ss_pred hhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch-------------------h-h--hcCC--CCCceEEE
Confidence 99999863 22222 289999999998877654321 0 0 1222 23558999
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
|+||+.+.||++.+++++..+.+ ++++|+++|.++ ....++++..+++ +++.+.+. .+++..+++.||++++
T Consensus 194 ~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~d~~i~ 269 (353)
T cd03811 194 AVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGF--QSNPYPYLKAADLFVL 269 (353)
T ss_pred EEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEecc--cCCHHHHHHhCCEEEe
Confidence 99999999999999999999976 589999999987 4444555555443 34555544 2345679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHH---HHHHHHHHhhCHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQALA 557 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la---~~I~~ll~~~~~~~~~ 557 (609)
||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|.++++ +.|..+.++ .+.+.
T Consensus 270 ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~~~~ 337 (353)
T cd03811 270 SSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PELRE 337 (353)
T ss_pred CcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hHHHH
Confidence 999999999999999999999999999999999999999987 999999995 444444444 44555
Q ss_pred HHHHHH---HHhhCC
Q 007300 558 EMMKNG---MAQDLS 569 (609)
Q Consensus 558 ~~~~~~---~~~~fs 569 (609)
++++++ +.++|+
T Consensus 338 ~~~~~~~~~~~~~~~ 352 (353)
T cd03811 338 RLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHHHHHhc
Confidence 555532 345554
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-29 Score=260.83 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=170.7
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+.+..++.+|.++++|+..++.+.+. ++. +..+|+||+|.+.|.+..
T Consensus 145 ~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~~---------~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 145 IWDRRSAARVDYFIANSRFVARRIKKY--YGR---------DATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHHhcCCCEEEECCHHHHHHHHHH--hCC---------CcEEECCCCCHhhcCcCC---------------------
Confidence 345667889999999999999999752 221 567899999988776542
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecCh
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 465 (609)
...+.++|+||+.+.||++.+++|+.++. ++|+|+|+|+ ..+.+++ ....+|.+.+..+.
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~ 252 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSD 252 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCH
Confidence 12357999999999999999999999883 8999999987 3444444 44567988888888
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
+++..+|+.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~ 321 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVE 321 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHH
Confidence 889899999999999999 99999999999999999999999999999999999987 9999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhCCchHHHHHH
Q 007300 546 RALATYGTQALAEMMKNGMAQDLSWKGPAKKW 577 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~ 577 (609)
++++++. ...+++.++ .++|+|+...+++
T Consensus 322 ~l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 322 RFEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 9998742 233334333 3679999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=265.15 Aligned_cols=224 Identities=17% Similarity=0.123 Sum_probs=172.5
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccC-CCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGED-KGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~-~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
....+|.++++|+..++.+.+... ++... .++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~------~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNIE------PRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCCC------CcEEEEcCCCcccccCccc-------------------------
Confidence 356789999999998888775211 12111 2799999998654433211
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecCh
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 465 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 465 (609)
.+....|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+ +.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G-~~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKG-HR- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcC-CC-
Confidence 1233689999999999999999999999865 799999999998 4567777776653 4566555 32
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC-CcccccccCcceeEec-ccccccccCCCCC-HHHHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMG-SFSVDCEAVDPVD-VAAVST 542 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~i~~~~~G~l~~-~~~~~~~~v~~~d-~~~la~ 542 (609)
.+..+++.||++|+||..|+||++++|||+||+|||+++.+ |.+|+|.++.+|+++. +.+.+ ++.| ++++++
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~ 459 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAE 459 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHH
Confidence 35568999999999999999999999999999999999986 8999999999999871 00000 1223 899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHH
Q 007300 543 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 543 ~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l 584 (609)
+|.++++ ++.+.+|++++ .++.|||+.++++|+++|+++
T Consensus 460 ~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 460 KIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999994 33566676666 468899999999999999764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=253.30 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=171.5
Q ss_pred HHHHHH-hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 306 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 306 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
.++... .+.+|.++++|+..++.+.+ .|++. ..++.+||||+|.+.|.+...
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~------------------- 137 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPK------------------- 137 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCcc-------------------
Confidence 445555 57899999999999999876 34321 128999999999988865421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
...+..++++.|++.++||++.|++|++.+.+ ++++++++|++.. +..+. ...+ + ...
T Consensus 138 -----------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~--~~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 138 -----------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML--DPRLF----GLNG-V--KTP 197 (331)
T ss_pred -----------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc--chhhc----cccc-e--ecc
Confidence 01133577788899999999999999999875 5899999997652 11111 1111 1 223
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEeccc-c--------cccccCC
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF-S--------VDCEAVD 533 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~-~--------~~~~~v~ 533 (609)
.+.+++..+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++..- . ..|=++-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 466788889999999999999999999999999999999999999999999999999886210 0 0111122
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHH-H--HHHhhCCchHHHHHHHHHHHH
Q 007300 534 PVDVAAVSTTVRRALATYGTQALAEMMK-N--GMAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 534 ~~d~~~la~~I~~ll~~~~~~~~~~~~~-~--~~~~~fs~~~~a~~~~~~~~~ 583 (609)
+.|.+++++.+.+++.+++++.+.++.. + ...++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3477889999999998743343333332 2 257999999999999999974
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=242.73 Aligned_cols=225 Identities=16% Similarity=0.234 Sum_probs=170.2
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 45566677788999999999999986 45542 23 47899999988775321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCChhhHHHHHHHHHhCCCceEE
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 459 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 459 (609)
..++++++.... +.++|+++||+.++||++.|++|++++.+ + +++++++|.+ .++++. .++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~--l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLE--VPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcC--CCCcEEE
Confidence 345666654322 45799999999999999999999999865 3 4688888742 223322 4456776
Q ss_pred Eeec---ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc------------------Ccc
Q 007300 460 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 518 (609)
Q Consensus 460 ~~~~---~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~------------------~~~ 518 (609)
.+.+ +.+++..+|++||++|+||++|+||++++|||+||+|||+++.||+.|++.+ ..+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 6432 4677888999999999999999999999999999999999999999997553 224
Q ss_pred eeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHH
Q 007300 519 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 579 (609)
Q Consensus 519 G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~ 579 (609)
||++ ++.|+++++++|.++++..+.+.+ .+.-...++.|+|+.++++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5554 889999999999999876444333 2222346789999999999974
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=250.38 Aligned_cols=245 Identities=14% Similarity=0.084 Sum_probs=174.6
Q ss_pred CCceEEEecccccc---hHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcC
Q 007300 225 PYDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 301 (609)
Q Consensus 225 ~pDvV~h~h~~~~~---~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 301 (609)
+||+| |+|..+.. ..+.++... .++|+++++|+..+. .. ..+.... ....
T Consensus 100 ~~DvV-~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~------~~~~~~~------------~~~~ 152 (371)
T PLN02275 100 RPDVF-LVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LL------ALSLGRS------------HPLV 152 (371)
T ss_pred CCCEE-EEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HH------hcccCCC------------CHHH
Confidence 69999 88864432 222333332 478999999975321 00 0000000 0001
Q ss_pred CchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccc
Q 007300 302 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 381 (609)
Q Consensus 302 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~ 381 (609)
.....+++..++.+|.++++|+.+++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~--------------- 205 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE--------------- 205 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch---------------
Confidence 1123445677889999999999999998752 232 378999994 4666554210
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcc-------------------cCCeEEEEEeCCChhh
Q 007300 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPM 442 (609)
Q Consensus 382 ~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~-------------------~~~~~lvivG~g~~~~ 442 (609)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ .
T Consensus 206 --------~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~ 272 (371)
T PLN02275 206 --------I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--Q 272 (371)
T ss_pred --------h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--C
Confidence 0 0111 12357889999999999999999998872 2689999999998 5
Q ss_pred HHHHHHHHHhCC-CceEEEee-cChHHHHHHHHhCcEEEecC--C-CCCCcHHHHHHHHcCCceEEcCCCCcccccccCc
Q 007300 443 EKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 517 (609)
Q Consensus 443 ~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~~l~~aDv~v~pS--~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~ 517 (609)
.+.++++..+++ .++.++.. .+.++++.+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|+|.++.
T Consensus 273 ~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~ 352 (371)
T PLN02275 273 KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGK 352 (371)
T ss_pred HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCC
Confidence 667777776654 24666664 47888899999999999863 2 3889999999999999999999999999999999
Q ss_pred ceeEecccccccccCCCCCHHHHHHHHHHHH
Q 007300 518 TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548 (609)
Q Consensus 518 ~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll 548 (609)
+|+++ + |+++++++|.+++
T Consensus 353 ~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 353 NGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CeEEE----------C--CHHHHHHHHHHhC
Confidence 99986 4 6999999998864
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-27 Score=251.91 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=178.6
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+.+..+..+|.++++|+..++.+.+. ++...+ ++.+++||+|...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 445556889999999999999998863 444333 889999999876554321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C--CeEEEEEeCCChhhHHHHHHHHHhCC--CceEE
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 459 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~ 459 (609)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.++++..+.+ .++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245789999999999999999999999976 2 57788899987 5666777765443 45777
Q ss_pred EeecChHHHHHHHHh--CcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCC-CC
Q 007300 460 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 536 (609)
Q Consensus 460 ~~~~~~~~~~~~l~~--aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~-~d 536 (609)
.+..+.+++..+++. +|++++||..|++|++++|||++|+|||+|+.||..|++.++.+|+++ ++ +|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 777777787778865 789999999999999999999999999999999999999999999987 65 58
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHH
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 578 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~ 578 (609)
+++++++|.+++++ ++.+.+|++++ +.++|+|+...+++.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999987 55666665555 579999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=241.25 Aligned_cols=214 Identities=21% Similarity=0.207 Sum_probs=172.8
Q ss_pred HHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 309 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 309 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
...+..+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 152 ~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~----------------------- 199 (372)
T cd04949 152 FENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF----------------------- 199 (372)
T ss_pred HhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch-----------------------
Confidence 334678999999999999998762 2211 15899999999876654310
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecC
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFN 464 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~ 464 (609)
.....+.++++||+.+.||++.+++++.++.+ ++++|+|+|.|. ....+.++....+ +++.+.+ +
T Consensus 200 -------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~- 268 (372)
T cd04949 200 -------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y- 268 (372)
T ss_pred -------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C-
Confidence 11244689999999999999999999999865 789999999987 3445555554433 4455544 4
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC-CcccccccCcceeEecccccccccCCCCCHHHHHHH
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 543 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~ 543 (609)
.+++..+|+.||++++||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ +++|+++++++
T Consensus 269 ~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~~ 338 (372)
T cd04949 269 TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAEA 338 (372)
T ss_pred CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHHH
Confidence 3456679999999999999999999999999999999999987 899999999999987 99999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHH
Q 007300 544 VRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 577 (609)
Q Consensus 544 I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~ 577 (609)
|.+++++ ++.+.++++++. .++|||+.++++|
T Consensus 339 i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 339 IIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 9999998 667777777664 6899999999876
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=229.57 Aligned_cols=342 Identities=16% Similarity=0.037 Sum_probs=224.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++++.. .||...+..+|+++|.++||+|.+++.......+ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 899999865 5888888999999999999999999975321010 001136777
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.++.+..... . ..........+...+.++.+.+... +|||| |+|.+...+...+.
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~~-------~pDvv-~~~~~~~~~~~~~~ 109 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKRF-------KPDVV-VGFGGYVSGPGGLA 109 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEE-EECCCcchhHHHHH
Confidence 76654321110 0 0011112222333333333333221 59999 99987776655544
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
... .++|++++.|+..+ . ...+..+..+|.+++.++.
T Consensus 110 ~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~~~~ 146 (357)
T PRK00726 110 ARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATAFPG 146 (357)
T ss_pred HHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheECchh
Confidence 433 58899987664211 0 1123346689999998874
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.... .+. .++++|+||+|...+.+.. .+.+++++. +.++|+
T Consensus 147 ~~~~--------~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~~i~ 187 (357)
T PRK00726 147 AFPE--------FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGRE--GKPTLL 187 (357)
T ss_pred hhhc--------cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCCC--CCeEEE
Confidence 4211 222 2899999999987654321 112344443 447889
Q ss_pred EEeccccccCHHHHH-HHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCC
Q 007300 405 FIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll-~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
++|+....|+...++ +|++++.+....++++|+|. .++..+.+ . .+.++.+ ..|. +....+|+.||+++.++-
T Consensus 188 ~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~-~g~~-~~~~~~~~~~d~~i~~~g 261 (357)
T PRK00726 188 VVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEV-VPFI-DDMAAAYAAADLVICRAG 261 (357)
T ss_pred EECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEE-eehH-hhHHHHHHhCCEEEECCC
Confidence 999988888865555 99988865335577889987 34444444 3 4434443 3443 456689999999998762
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCC--------cccccccCcceeEecccccccccCCCCC--HHHHHHHHHHHHHhhCH
Q 007300 484 FEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATYGT 553 (609)
Q Consensus 484 ~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~i~~~~~G~l~~~~~~~~~~v~~~d--~~~la~~I~~ll~~~~~ 553 (609)
+++++|||++|+|+|++..++ ..+.+.+..+|+++ ++.| +++++++|++++++ +
T Consensus 262 ----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~--~ 325 (357)
T PRK00726 262 ----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD--P 325 (357)
T ss_pred ----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC--H
Confidence 689999999999999987643 23567777889976 7777 99999999999998 6
Q ss_pred HHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007300 554 QALAEMMKNGM--AQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 554 ~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~ 582 (609)
+.+.+|++++. .+.++-+.+++.|+++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 67777777663 567888888888877654
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=243.19 Aligned_cols=292 Identities=18% Similarity=0.215 Sum_probs=204.8
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
.|+| +.||+|..++|.+++... ++.|+++.+|-..+... .|..+ | ..
T Consensus 132 ~d~i-wihDyhl~llp~~lr~~~------~~~~i~~f~HipfP~~e----~~~~l--p--------------------~~ 178 (460)
T cd03788 132 GDLV-WVHDYHLLLLPQMLRERG------PDARIGFFLHIPFPSSE----IFRCL--P--------------------WR 178 (460)
T ss_pred CCEE-EEeChhhhHHHHHHHhhC------CCCeEEEEEeCCCCChH----HHhhC--C--------------------Ch
Confidence 5998 999999999999998753 68899999995433110 00000 0 11
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCC--Cccch--h----hhccCCeeEecCCCCCCCcCCCCccccccccCcchh
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDK--GVELD--N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 377 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~--g~~~~--~----~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~ 377 (609)
..+-..+..+|.|.+.+..+...+.+.... +.+.. . .-+..++.+||||+|++.|.+....
T Consensus 179 ~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~----------- 247 (460)
T cd03788 179 EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS----------- 247 (460)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC-----------
Confidence 233456777999999998887766652211 11100 0 0112378999999999888654210
Q ss_pred cccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CC----eEEEEEeCCC-------hhhHH
Q 007300 378 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPMEK 444 (609)
Q Consensus 378 ~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~----~~lvivG~g~-------~~~~~ 444 (609)
+..+..+++..+.. ++.++|+++||+++.||++.+++|++.+.+ ++ ++|+++|.+. ..+.+
T Consensus 248 ----~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~ 321 (460)
T cd03788 248 ----PEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRR 321 (460)
T ss_pred ----chhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHH
Confidence 11123333333333 255899999999999999999999998865 33 6788887532 23556
Q ss_pred HHHHHHHhCC--------CceEEEee-cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCc----eEEcCCCCccc
Q 007300 445 QLEQLEILYP--------EKARGVAK-FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 511 (609)
Q Consensus 445 ~l~~l~~~~~--------~~v~~~~~-~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 511 (609)
+++++..+.+ ..+.++.. .+.+++..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+
T Consensus 322 ~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~ 401 (460)
T cd03788 322 EVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE 401 (460)
T ss_pred HHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh
Confidence 6666544321 12444443 47788889999999999999999999999999999999 99999988887
Q ss_pred ccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 512 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 512 ~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
. +.+|+++ +|.|+++++++|.++++++ .+.+..+.+++ ...+|||+..+++++.-+
T Consensus 402 ~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 402 E---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred h---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 7 4678976 9999999999999999873 33444444333 357899999999987643
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=235.67 Aligned_cols=292 Identities=17% Similarity=0.198 Sum_probs=206.0
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||+|..++|.+++... ++.++.|.+|-+.+.. +.|..+ | ..
T Consensus 128 ~d~v-wvhDYhl~l~p~~lr~~~------~~~~igfFlHipfP~~----e~f~~l--p--------------------~r 174 (456)
T TIGR02400 128 GDIV-WVHDYHLMLLPAMLRELG------VQNKIGFFLHIPFPSS----EIYRTL--P--------------------WR 174 (456)
T ss_pred CCEE-EEecchhhHHHHHHHhhC------CCCeEEEEEeCCCCCh----HHHhhC--C--------------------cH
Confidence 4888 999999999999999874 6889999999543311 111110 1 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccch--hh---hccCCeeEecCCCCCCCcCCCCccccccccCcchhc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 378 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~---~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~ 378 (609)
..+-.++..+|.|-+.+..+++.+.+... .|.+.. .+ -+..++.+||||+|++.|.+....
T Consensus 175 ~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------ 242 (456)
T TIGR02400 175 RELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------ 242 (456)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------
Confidence 34556788999999999999998876322 122111 00 133478999999999988764311
Q ss_pred ccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeC-----CC--hhhHHH
Q 007300 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEKQ 445 (609)
Q Consensus 379 ~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~-----g~--~~~~~~ 445 (609)
.........++++++ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..+++.
T Consensus 243 ~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~ 317 (456)
T TIGR02400 243 PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQ 317 (456)
T ss_pred hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHH
Confidence 000111224566553 55799999999999999999999999864 3 366877753 22 234555
Q ss_pred HHHHHHhCCC--------ceEEEe-ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccc
Q 007300 446 LEQLEILYPE--------KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 512 (609)
Q Consensus 446 l~~l~~~~~~--------~v~~~~-~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 512 (609)
++++..+.++ .+.++. ..+.+++..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+.
T Consensus 318 i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~ 397 (456)
T TIGR02400 318 VEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE 397 (456)
T ss_pred HHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH
Confidence 6665432111 133332 346788889999999999999999999999999999999 999999998888
Q ss_pred cccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH--HHHHHhhCCchHHHHHHHHHH
Q 007300 513 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 513 i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~--~~~~~~~fs~~~~a~~~~~~~ 581 (609)
+. +|+++ +|.|+++++++|.++++++..++..++. ++. ...+|+...++++++-+
T Consensus 398 l~---~gllV----------nP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 398 LN---GALLV----------NPYDIDGMADAIARALTMPLEEREERHRAMMDK-LRKNDVQRWREDFLSDL 454 (456)
T ss_pred hC---CcEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHh
Confidence 74 68876 9999999999999999874333333322 222 45699999999888654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-23 Score=217.10 Aligned_cols=324 Identities=15% Similarity=0.064 Sum_probs=206.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
+|++.+.+ .||-..++..|+++|.++||+|.++|.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 6888888999999999999999999976321111 0012356666
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLK 245 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~ 245 (609)
.+..+.+..+ . .......+..+.+...++.+.+... +||+| |+|.+...+...+..
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~~~-------~pDvI-~~~~~~~~~~~~~~a 108 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILKKF-------KPDVV-VGFGGYVSGPVGLAA 108 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEE-EECCCCcchHHHHHH
Confidence 6543221110 0 0011111111222222222222211 59999 888655444333333
Q ss_pred HhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHH
Q 007300 246 TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325 (609)
Q Consensus 246 ~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~ 325 (609)
.. .++|+++..|+..+ . .+.+.....+|.++++|+..
T Consensus 109 ~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s~~~ 145 (350)
T cd03785 109 KL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSFPET 145 (350)
T ss_pred HH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcchhh
Confidence 32 47888876553110 0 11233456699999999988
Q ss_pred HHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEE
Q 007300 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 326 ~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~ 405 (609)
.+.+ . ..++.+|+||+|...+.+.. . +++++++. +.+++++
T Consensus 146 ~~~~--------~------~~~~~~i~n~v~~~~~~~~~---------------------~--~~~~~~~~--~~~~i~~ 186 (350)
T cd03785 146 AKYF--------P------KDKAVVTGNPVREEILALDR---------------------E--RARLGLRP--GKPTLLV 186 (350)
T ss_pred hhcC--------C------CCcEEEECCCCchHHhhhhh---------------------h--HHhcCCCC--CCeEEEE
Confidence 7751 1 12899999999977664321 1 55666654 4478888
Q ss_pred EeccccccCHH-HHHHHHhhcccCCeEE-EEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCC
Q 007300 406 IGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 406 iGrl~~~Kg~~-~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
+|+....|+.+ .++++++.+.++++++ +++|+|. .+.++++..++..++.+.+.. +.+..+|+.||+++.++-
T Consensus 187 ~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~sg 261 (350)
T cd03785 187 FGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRAG 261 (350)
T ss_pred ECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECCC
Confidence 88877777765 4568888887566765 4678773 244555544444456655433 566679999999998762
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCC--------cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHhhCH
Q 007300 484 FEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 553 (609)
Q Consensus 484 ~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~~ 553 (609)
+++++|||++|+|+|+++.++ ..+.+.+..+|+++ ++. |+++++++|.+++++ +
T Consensus 262 ----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~--~ 325 (350)
T cd03785 262 ----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD--P 325 (350)
T ss_pred ----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC--H
Confidence 689999999999999987654 24667777899986 766 899999999999986 6
Q ss_pred HHHHHHHHHHH
Q 007300 554 QALAEMMKNGM 564 (609)
Q Consensus 554 ~~~~~~~~~~~ 564 (609)
+.+.+|++++.
T Consensus 326 ~~~~~~~~~~~ 336 (350)
T cd03785 326 ERLKAMAEAAR 336 (350)
T ss_pred HHHHHHHHHHH
Confidence 77777777653
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-23 Score=216.38 Aligned_cols=321 Identities=15% Similarity=0.074 Sum_probs=200.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||+|++.+ .||-.....+|+++|.++||+|++++.......+ .. ...|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~~--~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------LV--PKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------cc--ccCCCce
Confidence 799988865 3454545679999999999999999864221000 00 1236666
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.++...+... . .......+..+.....++.+.+... +||+| |+|.+........+
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~~-------~pDvV-i~~~~~~~~~~~~~ 108 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKKF-------KPDAV-IGFGGYVSGPAGLA 108 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEE-EEcCCcccHHHHHH
Confidence 66643221100 0 0111111111222222222222222 59999 88866555444444
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
... .++|++++.|+..+ . ...+...+.+|.++++|+.
T Consensus 109 ~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~~~~ 145 (348)
T TIGR01133 109 AKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLISFPG 145 (348)
T ss_pred HHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEECchh
Confidence 433 47788744332100 0 1123446789999999998
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.++.+ +..+|+||+|...+.+... +++++++. +.++|+
T Consensus 146 ~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~~--~~~~i~ 183 (348)
T TIGR01133 146 AKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLRE--GKPTIL 183 (348)
T ss_pred HhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCCC--CCeEEE
Confidence 87654 2368999998765543210 12456653 457899
Q ss_pred EEeccccccCHHH-HHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 405 FIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 405 ~iGrl~~~Kg~~~-ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
++|+....|++.. +++|++.+.+.+++++++ |++. . +.+++...+++ +...+.|....+..+|+.||+++.++
T Consensus 184 ~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~~~ 258 (348)
T TIGR01133 184 VLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVISRA 258 (348)
T ss_pred EECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEECC
Confidence 9998888888654 558888886656777544 4443 2 45666555544 22222232325678999999999865
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCCC-------cccccccCcceeEecccccccccCCCCC--HHHHHHHHHHHHHhhCH
Q 007300 483 RFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATYGT 553 (609)
Q Consensus 483 ~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~i~~~~~G~l~~~~~~~~~~v~~~d--~~~la~~I~~ll~~~~~ 553 (609)
+ |++++|||++|+|+|+++.+| ..+++.++.+|+++ ++.| +++++++|++++++ +
T Consensus 259 ---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~--~ 322 (348)
T TIGR01133 259 ---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD--P 322 (348)
T ss_pred ---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC--H
Confidence 2 789999999999999998754 23578888999986 7766 99999999999987 6
Q ss_pred HHHHHHHHHH
Q 007300 554 QALAEMMKNG 563 (609)
Q Consensus 554 ~~~~~~~~~~ 563 (609)
+.+.+|++++
T Consensus 323 ~~~~~~~~~~ 332 (348)
T TIGR01133 323 ANLEAMAEAA 332 (348)
T ss_pred HHHHHHHHHH
Confidence 7777787765
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-21 Score=208.57 Aligned_cols=220 Identities=13% Similarity=0.104 Sum_probs=158.8
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
.+.+|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 55899999999999999986 676655 777776655432 222111 3456788
Q ss_pred hCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHH
Q 007300 392 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 471 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~ 471 (609)
+|++.+. ..++++.|++...|+++.+++++.+. ++++++++|++.....+.++++....+.++.+.+ |. +.+..+
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g-~~-~~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFG-YV-ENIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEe-ch-hhHHHH
Confidence 8887532 23556678888889999999998754 6899988765444466777777766665677664 43 245679
Q ss_pred HHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----cccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 472 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 472 l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
|+.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 466999999999999999986 45532 23333 34433 55899999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
++++ ++.+.+|++++ +...++++.+++.+++.+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 9987 66777777765 34668999999999887754
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=230.06 Aligned_cols=299 Identities=18% Similarity=0.226 Sum_probs=208.3
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| -.||+|..++|.+++... +++++.|.+|-+.+... .|..+ | ..
T Consensus 148 ~d~v-WvhDYhL~llp~~lR~~~------~~~~igfFlHiPFPs~e----~fr~l--p--------------------~r 194 (797)
T PLN03063 148 GDVV-WCHDYHLMFLPQYLKEYN------NKMKVGWFLHTPFPSSE----IYKTL--P--------------------SR 194 (797)
T ss_pred CCEE-EEecchhhhHHHHHHHhC------CCCcEEEEecCCCCCHH----HHhhC--C--------------------CH
Confidence 3888 999999999999999875 79999999996543110 01100 0 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccc--hhhh---ccCCeeEecCCCCCCCcCCCCccccccccCcchhc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 378 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~ 378 (609)
.-+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.+||||||+..|.+....
T Consensus 195 ~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~------------ 262 (797)
T PLN03063 195 SELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL------------ 262 (797)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC------------
Confidence 33455788999999999999998876221 12111 1111 22478999999999888654210
Q ss_pred ccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CC----eEEEEEeC-----CC--hhhHHH
Q 007300 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GK--KPMEKQ 445 (609)
Q Consensus 379 ~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~----~~lvivG~-----g~--~~~~~~ 445 (609)
.........+++.++ ++++|+++||+++.||++.+++|++.+.+ ++ +.|+.++. ++ ..++++
T Consensus 263 ~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~ 337 (797)
T PLN03063 263 PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQ 337 (797)
T ss_pred hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHH
Confidence 000011123444443 45799999999999999999999999865 44 44554432 22 235556
Q ss_pred HHHHHHhCCCc--------eEEEe-ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccc
Q 007300 446 LEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDT 512 (609)
Q Consensus 446 l~~l~~~~~~~--------v~~~~-~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~ 512 (609)
++++....+.+ +.+.. ..+.+++..+|+.||++++||..||+|++.+|||+||+| +|+|..+|..+.
T Consensus 338 v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~ 417 (797)
T PLN03063 338 VHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS 417 (797)
T ss_pred HHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh
Confidence 66665332211 22222 346678888999999999999999999999999999999 999999999887
Q ss_pred cccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH-HHHhhCCchHHHHHHHHHHHHHHH
Q 007300 513 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 513 i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~-~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+ +.+|+++ +|.|++++|++|.++++....++..++.+. .....++|...++.+++.|.++..
T Consensus 418 l--~~~allV----------nP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 418 L--GAGALLV----------NPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred h--cCCeEEE----------CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 6 4468876 999999999999999996322222222211 246789999999999999988765
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.6e-21 Score=203.06 Aligned_cols=222 Identities=16% Similarity=0.160 Sum_probs=162.7
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+++..++.||.|+++|+...+.+.+ ++ . ++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---~------~i~~i~ngvd~~~f~~~~~~~------------------ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---P------NVVLVPNGVDYEHFAAARDPP------------------ 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---C------CEEEcccccCHHHhhcccccC------------------
Confidence 56788899999999999999998875 33 1 899999999999887653210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecCh
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 465 (609)
...+... ..+.++++|+|++.+.++++.+.++.+.. ++++|+|+|++.... ....+. ...++.+.+..+.
T Consensus 195 ~~~~~~~----~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLA----ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHh----cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 0000000 12458999999999988888777666543 789999999983111 111121 1246888888888
Q ss_pred HHHHHHHHhCcEEEecCCC-----CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHH
Q 007300 466 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
++++.+++.+|++++|+.. +++|++++|||+||+|||+|+.+.+. .....+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-----------eCCCHHHH
Confidence 9999999999999999864 46899999999999999999865544 33333443 56799999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007300 541 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 541 a~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 583 (609)
+++|.+++.+.......+. ++ +.+.+||+..++++++.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~~-~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERRR-LR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHHH-HH-HHHHCCHHHHHHHHHHHHHh
Confidence 9999998775433333222 22 67889999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-22 Score=226.38 Aligned_cols=297 Identities=17% Similarity=0.228 Sum_probs=207.6
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||+|..++|.+++... ++.++.|.+|-+.++... |.. +| ..
T Consensus 134 ~d~v-wvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~~----f~~--lp--------------------~~ 180 (726)
T PRK14501 134 GDVV-WVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFEV----FRL--LP--------------------WR 180 (726)
T ss_pred CCEE-EEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChHH----Hhh--CC--------------------Ch
Confidence 3888 999999999999998764 689999999965542211 111 11 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccc--hhh-h--ccCCeeEecCCCCCCCcCCCCccccccccCcchhc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNI-I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 378 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~-~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~ 378 (609)
..+-.++..+|.|-+.+..+++.+.+... .+.+. ..+ + +..++.++|||+|++.|.+....
T Consensus 181 ~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------ 248 (726)
T PRK14501 181 EEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------ 248 (726)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------
Confidence 33455788999999999998888765321 11110 000 1 12368999999999988764210
Q ss_pred ccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCC-------hhhHHH
Q 007300 379 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPMEKQ 445 (609)
Q Consensus 379 ~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~-------~~~~~~ 445 (609)
.........+++.++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. ..+++.
T Consensus 249 ~~~~~~~~~lr~~~~-----~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~ 323 (726)
T PRK14501 249 PEVQEEIRRLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKRE 323 (726)
T ss_pred chHHHHHHHHHHHcC-----CCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHH
Confidence 000111223444432 55799999999999999999999999864 3 37898887431 235555
Q ss_pred HHHHHHhCCC--------ceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcC-----CceEEcCCCCccc
Q 007300 446 LEQLEILYPE--------KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG-----TVPIVASTGGLVD 511 (609)
Q Consensus 446 l~~l~~~~~~--------~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G-----~PvI~s~~gg~~e 511 (609)
++++..+.+. .+.++ ..++.+++..+|+.||++++||..|+||++.+|||+|| +||++...|+..+
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~ 403 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE 403 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH
Confidence 6665443221 13333 34577888899999999999999999999999999994 4666666777777
Q ss_pred ccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH--HHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 512 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 512 ~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~--~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
++ .|+++ +|.|+++++++|.+++.++..++..++. ++ ....|||+..++++++.|.++...
T Consensus 404 l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~-~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 404 LA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQE-RLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred hC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHhh
Confidence 65 37876 9999999999999999864333333332 22 246899999999999999988653
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.8e-21 Score=205.40 Aligned_cols=234 Identities=16% Similarity=0.122 Sum_probs=164.0
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+++..++.+|.|+++|+..++.+.+ .|++ .. +.+++|+ +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 45567788999999999999999986 5543 12 6778884 333222111 01124
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCce------
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------ 457 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v------ 457 (609)
..++++++ + +.++++++|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+...
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677776 3 44788888864 6789999999999765 78999999998732 245666655544211
Q ss_pred --------EEEeecChHHHHHHHHhCcEEEe-cCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccC-cceeEecccc
Q 007300 458 --------RGVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 526 (609)
Q Consensus 458 --------~~~~~~~~~~~~~~l~~aDv~v~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~-~~G~l~~~~~ 526 (609)
+.++. ...++..+|+.||++++ +|..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 11111 23467789999999655 67779999999999999999999864 5566666542 457765
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 527 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 527 ~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
.++|+++++++|.+++++ ++.+.+|++++...--+.....+++.+.+.+.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999987 6667777776632111225778888888887654
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-21 Score=180.04 Aligned_cols=164 Identities=27% Similarity=0.439 Sum_probs=139.1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcc---cCCeEEEEEeCCChhhHHHHHHHHHhCC--CceEE
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 459 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~ 459 (609)
++..+...+.+. +.++|+|+||+.+.||++.+++++..+. .++++++|+|++. ....+..+....+ .++.+
T Consensus 2 ~~~~~~~~~~~~--~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPD--KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-T--TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCC--CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 556677777654 4589999999999999999999999986 4799999999776 5556666665543 57888
Q ss_pred EeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHH
Q 007300 460 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 460 ~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
.+....+++..+|+.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 877787888899999999999999999999999999999999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHH
Q 007300 540 VSTTVRRALATYGTQALAEMMKNGM 564 (609)
Q Consensus 540 la~~I~~ll~~~~~~~~~~~~~~~~ 564 (609)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999998 677788877764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=196.27 Aligned_cols=240 Identities=18% Similarity=0.180 Sum_probs=174.1
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
....+|++++.|...+..+... ...++ ...+.+.+..+|.+.+.+.- | +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~-~~~L~------~~d~~~~y~ei~~s~~~~~~-------~------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKAT-FVSLS------NSDITSTYPEIDGSWFTYGQ-------Y------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhhh-hhhcC------CCCcceeeccccchhccccc-------c------ccchhcccccce
Confidence 4567899999999888888752 11221 22588888889887766521 1 111112222333
Q ss_pred HhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc-------CCeEEEEEeCC-C-------hhhHHHHHHHHHhCC-
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG-K-------KPMEKQLEQLEILYP- 454 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~-------~~~~lvivG~g-~-------~~~~~~l~~l~~~~~- 454 (609)
..+.. .....+..+.++.+.||++++++++.++.. .+.+++++|+. . ..+.+.+.++..+++
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33433 223678899999999999999999998865 25788888842 1 246677777777764
Q ss_pred -CceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccC
Q 007300 455 -EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 532 (609)
Q Consensus 455 -~~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v 532 (609)
++++.+ ..........+++.+.+.+.....|+||++.+|||+||+|||+++.||..|+|.++.|||++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 234444 33344444456777777777666699999999999999999999999999999999999997
Q ss_pred CCCCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007300 533 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 533 ~~~d~~---~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+| +.+ .+++++.++..+ ++.+.+|+++. +.+.|||+.+.+++.++..+..
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 77 555 699999999998 66677776665 6788999999999888887554
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-19 Score=191.78 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=158.9
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
...+|.+++.|+..++.+.+ .|++.+ ++.++.|+++..+..+. + +..++++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHH
Confidence 45799999999999999986 577655 78887777764332221 1 4566778
Q ss_pred hCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHH
Q 007300 392 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 471 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~ 471 (609)
+|++.+. ..++++.|++...||++.+++++.+. .+++++++++++.+.+.+.+++.... ..++.+.+ |. +.++.+
T Consensus 196 ~~l~~~~-~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPDK-QTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCCC-CEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHH
Confidence 8887543 23556789999899999999986432 25788876654333344444443222 23455443 44 456789
Q ss_pred HHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 472 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 472 l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
|+.||+++. ++.|++++|||++|+|+|+++. +| ...++.+.+.|+. ..|+++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999996 3579999999999999999963 33 2223345555653 4699999999999
Q ss_pred HHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++++ ++.+.+|++++. .+.++++.+++++++++..+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9987 677888888774 5679999999999999876654
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-19 Score=194.03 Aligned_cols=216 Identities=17% Similarity=0.147 Sum_probs=157.0
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
.+.+|.++++|+..++.+.+ +|++.+ ++.++++++|.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 46899999999999999886 677666 8999999998765443321 5678899
Q ss_pred hCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcc------cCCeE-EEEEeCCChhhHHHHHHHHHhCCCceEEEeecC
Q 007300 392 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 464 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 464 (609)
+|++.+ .++|+++|+....|++..+++++..+. .++.+ ++++|.+. .+.+.++++.. ..++.+.+ |.
T Consensus 200 ~gl~~~--~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G-~~ 273 (382)
T PLN02605 200 LGMDED--LPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRG-FV 273 (382)
T ss_pred cCCCCC--CcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEe-cc
Confidence 999754 489999999999999999999998753 35566 56777663 34555555422 23455444 33
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC------CCcccccccCcceeEecccccccccCCCCCHH
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
++++.+|++||++|.++ .|++++|||+||+|+|+++. |+. +.+.++..|+. ..|++
T Consensus 274 -~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 274 -TNMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred -ccHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 35778999999999865 48899999999999999984 333 44455556763 48999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHH
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 580 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~ 580 (609)
+++++|.+++.+ +++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2456677776653 3445556666555443
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-19 Score=192.51 Aligned_cols=293 Identities=16% Similarity=0.151 Sum_probs=209.5
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| -.||+|..++|.+|+... ++.++.|.+|-+.+.. ..|..+ | ..
T Consensus 133 ~d~v-WVhDYhL~llp~~LR~~~------~~~~IgfFlHiPFPs~----eifr~L--P--------------------~r 179 (487)
T TIGR02398 133 GATV-WVHDYNLWLVPGYIRQLR------PDLKIAFFHHTPFPSA----DVFNIL--P--------------------WR 179 (487)
T ss_pred CCEE-EEecchhhHHHHHHHHhC------CCCeEEEEeeCCCCCh----HHHhhC--C--------------------ch
Confidence 3888 999999999999999864 6899999999644311 111111 1 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccchh-----------------------h---hccCCeeEecCCCCC
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGMDV 357 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----------------------~---~~~~~i~vI~nGvd~ 357 (609)
..+-.++..+|.|-+.+..+++.+.+... .|.+... + -+...+.++|.|||+
T Consensus 180 ~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~ 259 (487)
T TIGR02398 180 EQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDP 259 (487)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecH
Confidence 34455788999999999999998876321 1211100 0 122358899999999
Q ss_pred CCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeE
Q 007300 358 QEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQ 431 (609)
Q Consensus 358 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~ 431 (609)
+.|.+.... .......+.++++++ ++++|++++|+++.||+...++|++++.+ | ++.
T Consensus 260 ~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~ 322 (487)
T TIGR02398 260 ERIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVT 322 (487)
T ss_pred HHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceE
Confidence 988654210 011122455777777 45799999999999999999999999865 4 578
Q ss_pred EEEEeCCC-------hhhHHHHHHHHHhCCC--------c-eEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHH
Q 007300 432 IIVLGTGK-------KPMEKQLEQLEILYPE--------K-ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAM 495 (609)
Q Consensus 432 lvivG~g~-------~~~~~~l~~l~~~~~~--------~-v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAm 495 (609)
|+++|.+. ..+.+++++++.+.+. . +.+...++.+++..+|+.||++++||..||++++..|++
T Consensus 323 Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyv 402 (487)
T TIGR02398 323 LVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYV 402 (487)
T ss_pred EEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHH
Confidence 99998764 2466777777665421 1 233334477888889999999999999999999999999
Q ss_pred HcCC----ceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhCCc
Q 007300 496 RYGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSW 570 (609)
Q Consensus 496 a~G~----PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs~ 570 (609)
+|+. |+|.|..+|..+.+. .++++ +|.|++++|++|.++|.++..++..++.+.. ....++.
T Consensus 403 a~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~ 469 (487)
T TIGR02398 403 AAQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDV 469 (487)
T ss_pred hhhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCH
Confidence 9988 999999999987763 36765 9999999999999999986545555544322 3455666
Q ss_pred hHHHHHHHHHH
Q 007300 571 KGPAKKWEETL 581 (609)
Q Consensus 571 ~~~a~~~~~~~ 581 (609)
..-++.+++-+
T Consensus 470 ~~W~~~fl~~l 480 (487)
T TIGR02398 470 QRWADEFLAAV 480 (487)
T ss_pred HHHHHHHHHHh
Confidence 66555555433
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=175.93 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=96.0
Q ss_pred EEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec-ChHHHHHHHHhCcEEEec
Q 007300 405 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 481 (609)
Q Consensus 405 ~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~~l~~aDv~v~p 481 (609)
|+|++.+.||++.+++++..+.+ ++++++++|.+.+...............++.+...+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987422222111122234567776665 456666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEe
Q 007300 482 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 522 (609)
Q Consensus 482 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~ 522 (609)
|..|++|++++|||++|+|+|+|+.++..|++.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-17 Score=173.90 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=145.5
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
..+.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 346789999999999999886 677665 899999985 5332221110 011123
Q ss_pred HHhCCCCCCCCcEEEEEecccc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhC---CCceEEEeec
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 463 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~---~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 463 (609)
+.++++. +..++++.||... .||++.++++++++.+.++++++.|++. ..+.+++...++ ..++.+....
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 4666653 3357778999874 7999999999999865457776666655 445555554443 2456655444
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCHHHHHH
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 542 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~ 542 (609)
....+..+|+.||++|.+|- | ++.|||++|+|+|++.. +..++.++.|. ++. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 55677789999999999984 4 47999999999999975 44556666543 332 2347999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007300 543 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 580 (609)
Q Consensus 543 ~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~ 580 (609)
+|.+++++ +....+|. ...|.--..+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 44444443 3344444445555443
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.1e-17 Score=173.57 Aligned_cols=219 Identities=17% Similarity=0.121 Sum_probs=146.7
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
..+.+|.++++|+..++.+.+ .|. ++.++.|.+.... .+.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~-~~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAI-PLLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhc-cccc-------------------ChHHHHH
Confidence 467899999999998888775 332 3444444432211 1100 1455677
Q ss_pred HhCCCCCCCCcEE-EEEe-ccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC-CCceEEEeecC
Q 007300 391 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 464 (609)
Q Consensus 391 ~~gl~~~~~~~~i-~~iG-rl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 464 (609)
+++++.+ .+++ ++.| |..+. ++.+.++++++.+.+ ++++++++|.++ ...+.++++..+. +.++.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888654 3554 4445 34443 457899999998864 589999987633 2455566655554 333332 22
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-----------------CCCCcccccccCc--ceeEeccc
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 525 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~i~~~~--~G~l~~~~ 525 (609)
+++..+|+.||+++.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 322 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL---- 322 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----
Confidence 35677999999999987 88899999999999987 4566777777654 4454
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007300 526 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 526 ~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
.+..|++++++.|.+++++ ++.+++|++++ ..+.. -...+++..+.+.++..
T Consensus 323 ------~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 323 ------QEEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELLK 376 (380)
T ss_pred ------CCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhh
Confidence 3778999999999999998 77777777765 23333 34466666666666553
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-16 Score=167.01 Aligned_cols=185 Identities=16% Similarity=0.097 Sum_probs=134.2
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
..+++..++.+|.++++|+.+++.+.+ .|+..+ ++.+++|..+.....+..
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEecccccccccccccc--------------------
Confidence 456788899999999999999999986 565433 666666554331111100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 464 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 464 (609)
.....+.|+|+|++....++. + ..++++|+|+|+|+... ....++.+.+.++
T Consensus 165 -----------~~~~~~~i~yaG~l~k~~~l~---~-----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 165 -----------TPSFQKKINFAGNLEKSPFLK---N-----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----------cccCCceEEEecChhhchHHH---h-----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 011346899999999443211 1 23679999999997321 2345688988999
Q ss_pred hHHHHHHHHhCcEEEecCCC-----------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCC
Q 007300 465 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 533 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~ 533 (609)
.+++..+|+. |+.+++... -++|.++.|+|+||+|||+++.+++.|+|+++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 766664321 35788999999999999999999999999999999976 4
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007300 534 PVDVAAVSTTVRRALATYGTQALAEMMKNG 563 (609)
Q Consensus 534 ~~d~~~la~~I~~ll~~~~~~~~~~~~~~~ 563 (609)
+.+++++.|.++. .+.+.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7789999998853 34566666665
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-17 Score=185.64 Aligned_cols=297 Identities=18% Similarity=0.223 Sum_probs=203.4
Q ss_pred ceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhH
Q 007300 227 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 306 (609)
Q Consensus 227 DvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (609)
|+| ..||+|..++|.+++... +++++.|.+|-..+.. ..|..+ | ...
T Consensus 233 D~V-WVHDYHL~LlP~~LR~~~------p~~~IGfFlHiPFPs~----Eifr~L--P--------------------~r~ 279 (934)
T PLN03064 233 DVV-WCHDYHLMFLPKCLKEYN------SNMKVGWFLHTPFPSS----EIHRTL--P--------------------SRS 279 (934)
T ss_pred CEE-EEecchhhHHHHHHHHhC------CCCcEEEEecCCCCCh----HHHhhC--C--------------------cHH
Confidence 888 999999999999999874 7899999999654311 111111 0 123
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccC--CCcc--chhhh---ccCCeeEecCCCCCCCcCCCCccccccccCcchhcc
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGED--KGVE--LDNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 379 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~--~~~~~---~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~ 379 (609)
-+-.++..||.|-+.+..++..+.+... .|.+ ...+. +..++.++|-|||++.|...... .
T Consensus 280 elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~ 347 (934)
T PLN03064 280 ELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------P 347 (934)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------h
Confidence 3455788999999999999998886321 1221 11111 12257788999999887543210 0
Q ss_pred cchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CC----eEEEEE-----eCCC--hhhHHHH
Q 007300 380 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVL-----GTGK--KPMEKQL 446 (609)
Q Consensus 380 ~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~----~~lviv-----G~g~--~~~~~~l 446 (609)
........+++.++ ++.+|+.++|+++.||+...++|++++.+ |+ +.|+-+ ++++ ..++.++
T Consensus 348 ~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V 422 (934)
T PLN03064 348 QVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQV 422 (934)
T ss_pred hHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHH
Confidence 01112345667665 45799999999999999999999998754 44 334433 3332 2344556
Q ss_pred HHHHHhCCCc--------eEEEe-ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCC----ceEEcCCCCccccc
Q 007300 447 EQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTV 513 (609)
Q Consensus 447 ~~l~~~~~~~--------v~~~~-~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e~i 513 (609)
.++..+.+.+ |.+.. .++.+++..+|+.||++++||..||++++.+|||+|+. ++|.|..+|..+.+
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 5555543311 22222 24677788899999999999999999999999999954 45558888888877
Q ss_pred ccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007300 514 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 514 ~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+..++++ +|.|++++|++|.++|... .++..+..+.. ....+|+...++.+++-+.+...
T Consensus 503 --~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~ 564 (934)
T PLN03064 503 --GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVV 564 (934)
T ss_pred --CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHh
Confidence 3357766 9999999999999999963 33333332222 35779999999998887776653
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=170.42 Aligned_cols=216 Identities=19% Similarity=0.142 Sum_probs=146.5
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..+|.++++|+..++.+.+ .|++++ ++.+++|++ |...+.+.. .....++++
T Consensus 140 ~~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~ 192 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSE 192 (365)
T ss_pred HHHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHh
Confidence 3589999999999999986 577766 899999996 432221110 002344555
Q ss_pred hCCCCCCCCcEEEEEe-ccc-cccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHH
Q 007300 392 VGLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 467 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iG-rl~-~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 467 (609)
++. +.+++++.+ |.+ ..||++.+++|+.++.+ +++++++.|.+.....+.+.+.. ....++.+........
T Consensus 193 ~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 193 FGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLD 267 (365)
T ss_pred cCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHH
Confidence 552 224555555 543 45899999999999854 57899988655433333333322 2234577666666666
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
...+++.||+++.+| |..++|||++|+|||++ +.|+..+++.++ .+++ .+.|+++++++|.+
T Consensus 268 ~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~l-----------v~~d~~~i~~ai~~ 330 (365)
T TIGR00236 268 FLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKL-----------VGTDKENITKAAKR 330 (365)
T ss_pred HHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEE-----------eCCCHHHHHHHHHH
Confidence 667999999999887 66789999999999996 678888888866 4444 35799999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~ 581 (609)
++++ ++.+.+++++. ..|.-...+++..+.+
T Consensus 331 ll~~--~~~~~~~~~~~--~~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 331 LLTD--PDEYKKMSNAS--NPYGDGEASERIVEEL 361 (365)
T ss_pred HHhC--hHHHHHhhhcC--CCCcCchHHHHHHHHH
Confidence 9987 66666665543 3333233444444433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4e-16 Score=154.22 Aligned_cols=224 Identities=15% Similarity=0.153 Sum_probs=170.6
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
-..+|.+++.|.+...++.+. |+. ..+.+|+...+++.+ ...
T Consensus 220 G~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l----------------------------ks~ 261 (465)
T KOG1387|consen 220 GSKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL----------------------------KSK 261 (465)
T ss_pred cccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------HHH
Confidence 347899999999999998863 332 267788877766533 222
Q ss_pred hCCCCCCCCcEEEEEeccccccCHH-HHHHHHhhccc------CCeEEEEEeCCC----hhhHHHHHHHHHhC--CCceE
Q 007300 392 VGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEKAR 458 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~~Kg~~-~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~v~ 458 (609)
.+- .+.+.+.++++|.+.|.|+.. +-++|+..... ++++|+|+|.-. .+.-+.++.++..+ +.++.
T Consensus 262 ~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~ 340 (465)
T KOG1387|consen 262 FGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQ 340 (465)
T ss_pred hcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceE
Confidence 222 344568999999999999999 44555554443 479999999853 34556666666654 45777
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc-ccccc---CcceeEecccccccccCCC
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~i~~---~~~G~l~~~~~~~~~~v~~ 534 (609)
+....+.+++-.+|..|.+.+..-..|.||+.+.|+||+|+.+|+.+.||.. |+|.+ ..+||+.
T Consensus 341 F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------ 408 (465)
T KOG1387|consen 341 FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------ 408 (465)
T ss_pred EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------
Confidence 7777788888889999999999999999999999999999999999988854 67664 4689974
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHHc
Q 007300 535 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 535 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+.++.+++|.+++... .+.+..|.+++. ..+|+-...-+.|...+..++.+
T Consensus 409 ~t~~EYaE~iLkIv~~~-~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 409 PTDEEYAEAILKIVKLN-YDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred CChHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 67889999999999862 344555555553 57899999999999988888753
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-15 Score=156.96 Aligned_cols=223 Identities=28% Similarity=0.443 Sum_probs=169.0
Q ss_pred cCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhC
Q 007300 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 393 (609)
Q Consensus 314 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 393 (609)
..+.+++.+......+.. ... ..++..++|+++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~---------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPAR---------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCccc---------------------------cC
Confidence 478899999988665554 111 11678899999988776420 11
Q ss_pred CCCCCCCcEEEEEeccccccCHHHHHHHHhhcccC--CeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHH
Q 007300 394 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 469 (609)
Q Consensus 394 l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 469 (609)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..+.. .++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 4899999998743 233333444432 356665555646666
Q ss_pred HHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 470 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 470 ~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
.+++.||++++||.+|++|++++|||++|+|||+++.++..+++.++.+|+++ .+.|++++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999998778854 66689999999999998
Q ss_pred hhCHHHHHHHHH---HHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 550 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 550 ~~~~~~~~~~~~---~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+. +.+..+.+ +.....|+|+..++++.+++..+..
T Consensus 342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 DP--ELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 73 44444443 2334789999999999999988764
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-15 Score=161.65 Aligned_cols=344 Identities=17% Similarity=0.194 Sum_probs=188.2
Q ss_pred hHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccc
Q 007300 196 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFE 275 (609)
Q Consensus 196 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~ 275 (609)
+...|.+.+..+++.+...... ++.||.|+|+|+++....+++... ..+.+|||.|.... ||+--
T Consensus 120 ea~~Fgyava~fi~~f~~~~~~-------~~~ViaHfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~- 184 (633)
T PF05693_consen 120 EAVMFGYAVAWFIEEFYKFYEE-------KPKVIAHFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLA- 184 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHH-S--------SEEEEEEEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-------CCcEEEEechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhh-
Confidence 3445556666666555554321 478999999999999888888754 69999999997544 33210
Q ss_pred cccccCCccccccccccccC---CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEec
Q 007300 276 DFGLLNLPAQFKSSFDFIDG---YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 352 (609)
Q Consensus 276 ~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ 352 (609)
+-...++..+...++ ..+.-...+..+++.....||.+.|||+-++.+.... .+.. .=.|+|
T Consensus 185 -----~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~L--L~r~--------pDvV~p 249 (633)
T PF05693_consen 185 -----ANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVFTTVSEITAKEAEHL--LKRK--------PDVVTP 249 (633)
T ss_dssp -----TTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--HSS----------SEE--
T ss_pred -----cCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCeeeehhhhHHHHHHHH--hCCC--------CCEEcC
Confidence 001111111111000 0000011234566788889999999999998887631 2222 336789
Q ss_pred CCCCCCCcCCCCccccccccCcchhcccchHHHHHH----HHH-hCC-CCC-CCCcEEEEEeccc-cccCHHHHHHHHhh
Q 007300 353 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL----QAE-VGL-PVD-RNIPVIGFIGRLE-EQKGSDILAAAIPH 424 (609)
Q Consensus 353 nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~gl-~~~-~~~~~i~~iGrl~-~~Kg~~~ll~a~~~ 424 (609)
||+|...+..... | ..-....|+.+ +.. +|- .-+ ++..+|..+||.+ ..||+|.+|+|+.+
T Consensus 250 NGl~v~~~~~~~e------f-----qnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~r 318 (633)
T PF05693_consen 250 NGLNVDKFPALHE------F-----QNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALAR 318 (633)
T ss_dssp --B-GGGTSSTTH------H-----HHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHH
T ss_pred CCccccccccchH------H-----HHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHH
Confidence 9999887754321 0 00011223322 322 232 112 2456788999999 79999999999999
Q ss_pred ccc------CCeE---EEEEeCCC--------------hhh---------------------------------------
Q 007300 425 FIK------ENVQ---IIVLGTGK--------------KPM--------------------------------------- 442 (609)
Q Consensus 425 l~~------~~~~---lvivG~g~--------------~~~--------------------------------------- 442 (609)
|.. .+.. |+|+=... +.+
T Consensus 319 Ln~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~l 398 (633)
T PF05693_consen 319 LNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRL 398 (633)
T ss_dssp HHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHH
T ss_pred HHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHH
Confidence 843 2333 44442210 000
Q ss_pred ----------------------------HHHHHHHHHh--CCC--ceEEEeec-C------hHHHHHHHHhCcEEEecCC
Q 007300 443 ----------------------------EKQLEQLEIL--YPE--KARGVAKF-N------IPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 443 ----------------------------~~~l~~l~~~--~~~--~v~~~~~~-~------~~~~~~~l~~aDv~v~pS~ 483 (609)
...++++... ..+ +|.++..| + .-...+++.+||+.|+||.
T Consensus 399 kr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY 478 (633)
T PF05693_consen 399 KRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY 478 (633)
T ss_dssp HHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S
T ss_pred HHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc
Confidence 0012221111 111 34444444 1 1123368999999999999
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCccccccc-----CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC---HHH
Q 007300 484 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG---TQA 555 (609)
Q Consensus 484 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~-----~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~---~~~ 555 (609)
+|++|.+-+|+.++|+|.|+|+..|+...+.+ ...|+.+=. -...+.++.++.|.+.+.++- ..+
T Consensus 479 YEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~Vvd-------R~~~n~~e~v~~la~~l~~f~~~~~rq 551 (633)
T PF05693_consen 479 YEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVD-------RRDKNYDESVNQLADFLYKFCQLSRRQ 551 (633)
T ss_dssp SBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE--------SSSS-HHHHHHHHHHHHHHHHT--HHH
T ss_pred cccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEe-------CCCCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 99999999999999999999999997766653 234554300 033456777777666665441 222
Q ss_pred HHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 556 LAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 556 ~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
+..+..++ +.+.++|+.+...|.+.|..++..
T Consensus 552 ri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 552 RIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 22222222 578899999999999999988764
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-14 Score=141.88 Aligned_cols=301 Identities=17% Similarity=0.193 Sum_probs=191.4
Q ss_pred CCceEEEecccccc--hHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCC
Q 007300 225 PYDVVFVANDWHTS--LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 302 (609)
Q Consensus 225 ~pDvV~h~h~~~~~--~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 302 (609)
++|+|++-| .++. ++.+++... +++++.+...||..|.-. +.+..+...++..
T Consensus 103 ~~~~ilvQN-PP~iPtliv~~~~~~------l~~~KfiIDWHNy~Ysl~------------------l~~~~g~~h~lV~ 157 (444)
T KOG2941|consen 103 PPDIILVQN-PPSIPTLIVCVLYSI------LTGAKFIIDWHNYGYSLQ------------------LKLKLGFQHPLVR 157 (444)
T ss_pred CCcEEEEeC-CCCCchHHHHHHHHH------HhcceEEEEehhhHHHHH------------------HHhhcCCCCchHH
Confidence 589995444 3322 233333333 379999999999877300 0011122223333
Q ss_pred chhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-----CCCCC----cCCCCccccccccC
Q 007300 303 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-----MDVQE----WNPLTDKYIGVKYD 373 (609)
Q Consensus 303 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-----vd~~~----~~p~~~~~~~~~~~ 373 (609)
.....++..-+.||.-+||++.+++++.+. +|+. ++.+++.- .++++ |-+.... ..+|-
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d--~~~f~ 225 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGD--HSPFR 225 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhccc--cchhh
Confidence 344556677788999999999999999863 7765 34444421 11111 1111100 00011
Q ss_pred cchhcccchHHHHHHHHHhC---CCCCCCC-cEEEEEeccccccCHHHHHHHHhhccc---------CCeEEEEEeCCCh
Q 007300 374 ASTVMDAKPLLKEALQAEVG---LPVDRNI-PVIGFIGRLEEQKGSDILAAAIPHFIK---------ENVQIIVLGTGKK 440 (609)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~g---l~~~~~~-~~i~~iGrl~~~Kg~~~ll~a~~~l~~---------~~~~lvivG~g~~ 440 (609)
....+.+..+..++-++.. ....++. .+++..-.+++..++.+|++|+....+ |++-.+|.|.|+
T Consensus 226 -ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP- 303 (444)
T KOG2941|consen 226 -AREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP- 303 (444)
T ss_pred -hcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-
Confidence 1123445555555554443 1111122 467778889999999999999984421 567778888888
Q ss_pred hhHHHHHHHHHhCC-CceEEEe-ecChHHHHHHHHhCcEEEe--cCCC-CCCcHHHHHHHHcCCceEEcCCCCccccccc
Q 007300 441 PMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILI--PSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 515 (609)
Q Consensus 441 ~~~~~l~~l~~~~~-~~v~~~~-~~~~~~~~~~l~~aDv~v~--pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~ 515 (609)
+++...+...+++ .++.+.. +...++.+.+++.||+.|. +|.. -..|++++....||+||++-+...+.|+|++
T Consensus 304 -lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh 382 (444)
T KOG2941|consen 304 -LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH 382 (444)
T ss_pred -hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc
Confidence 4444444444433 2344443 4477888899999998665 4433 3589999999999999999999999999999
Q ss_pred CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC--HHHHHHHHHHHH-HhhCCchHHHHHH
Q 007300 516 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKW 577 (609)
Q Consensus 516 ~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~--~~~~~~~~~~~~-~~~fs~~~~a~~~ 577 (609)
++||++| .|.+++++.+..++.+.. ...+.+..++.. .+...|+..-++.
T Consensus 383 ~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 383 GENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred CCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHh
Confidence 9999998 899999999999999653 356666666665 3567776554443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.1e-15 Score=133.36 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=94.2
Q ss_pred CcEEEEEeccccccCHHHHHH-HHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~-a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+++.. +++..+++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999865 7899999999875 25555 22 258877766 46778999999
Q ss_pred EEEecCC-CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 477 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.. -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999997 47899999999999999999998 66777765556664 378999999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-12 Score=139.85 Aligned_cols=191 Identities=15% Similarity=0.075 Sum_probs=121.0
Q ss_pred HHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 309 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 309 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
+...+.+|.|++.++...+.+.+ .|. ++.++.|++......... .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 44567899999999999888764 232 455677776322111001 14556
Q ss_pred HHHhCCCCCCCCcEEEEEe--cccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhC--CCceEEEe
Q 007300 389 QAEVGLPVDRNIPVIGFIG--RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVA 461 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iG--rl~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~ 461 (609)
++++|++.+ .++|++.| |..+ .|++..++++++.+.+ +++++++.+.+.. ..+.++++...+ +..+..+
T Consensus 182 r~~lgl~~~--~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDHN--GETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCCC--CCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 778888654 47776553 6666 7899999999999865 5788877554321 334444444443 2233322
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC-CCC----------------cccccccCcceeEecc
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG----------------LVDTVEEGFTGFQMGS 524 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg----------------~~e~i~~~~~G~l~~~ 524 (609)
.. ....+|+.||++|.+| |.+.+|+|++|+|+|... ++. ++.++.+..-..-+
T Consensus 258 --~~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel-- 327 (385)
T TIGR00215 258 --DG-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPEL-- 327 (385)
T ss_pred --Cc-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhh--
Confidence 12 3346999999999999 888889999999998883 111 22222221111110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHh
Q 007300 525 FSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 525 ~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-+.-+++.+++.+.+++.+
T Consensus 328 ------~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 328 ------LQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred ------cCCCCCHHHHHHHHHHHhcC
Confidence 11445789999999999987
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.2e-12 Score=137.59 Aligned_cols=295 Identities=18% Similarity=0.200 Sum_probs=171.4
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||+|..++|.+++... +++++.|.+|-+.+.. ..+..+ ...
T Consensus 142 ~D~V-WVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~--------------e~fr~l------------P~r 188 (474)
T PF00982_consen 142 GDLV-WVHDYHLMLLPQMLRERG------PDARIGFFLHIPFPSS--------------EIFRCL------------PWR 188 (474)
T ss_dssp T-EE-EEESGGGTTHHHHHHHTT--------SEEEEEE-S----H--------------HHHTTS------------TTH
T ss_pred CCEE-EEeCCcHHHHHHHHHhhc------CCceEeeEEecCCCCH--------------HHHhhC------------CcH
Confidence 4888 999999999999999875 7899999999644311 111111 012
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccchhh-------hccCCeeEecCCCCCCCcCCCCccccccccCcch
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDNI-------IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 376 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~~-------~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~ 376 (609)
..+-.++..||.|-+.+..+++.+.+... .|.+.... -+...+.+.|-|||++.+.....
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~----------- 257 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLAR----------- 257 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhcc-----------
Confidence 44556788999999999999998876321 22221110 01235777888888776632110
Q ss_pred hcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC----h---hhH
Q 007300 377 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 443 (609)
Q Consensus 377 ~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~----~---~~~ 443 (609)
.+.-......++++++- +.++|+-+.|++..||+..=++|+.++.+ .++.|+-++... + .+.
T Consensus 258 -~~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 258 -SPEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred -ChHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 00111224557777651 24799999999999999999999999865 368888776532 2 344
Q ss_pred HHHHHHHH----hCCC----ceEEEe-ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007300 444 KQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 510 (609)
Q Consensus 444 ~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 510 (609)
++++++.. +++. -|.++. ..+.++...+|+.||+++++|..+|..++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 55555544 3331 133333 356677778999999999999999999999999998655 7888888888
Q ss_pred cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 007300 511 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 511 e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~a~~~~~~~ 581 (609)
+.+.++. +++ +|.|++++|++|.++|+.+..++..++.+.. ....++...-++.+++-+
T Consensus 413 ~~L~~~a--l~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 413 EQLSEAA--LLV----------NPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHcCCcc--EEE----------CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 8886542 444 9999999999999999985334444433322 345667666666665544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=143.76 Aligned_cols=212 Identities=12% Similarity=0.052 Sum_probs=156.1
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.+..+|.+|+.++...+.+...... .+ ...++..||.+.- ... +.
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~~~-~~-----~~~~v~~Ip~~~~-~~~-~~--------------------------- 313 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENYRE-NY-----VEFDISRITPFDT-RLR-LG--------------------------- 313 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHhhh-cc-----cCCcceeeCccce-EEe-cC---------------------------
Confidence 4668899999998877777642110 00 0114556664432 111 11
Q ss_pred HhCCCCCCCCcEEEEEe--ccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-hhHHHHHHHHHhCC-----------
Q 007300 391 EVGLPVDRNIPVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYP----------- 454 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iG--rl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~~----------- 454 (609)
. .++....+++++ |+ +.|.++.+++++.++.. |+++|.+.|.+.+ .+.+.++++..+++
T Consensus 314 ---~-s~r~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 314 ---Q-SQQLYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ---h-hhcccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccc
Confidence 1 112334678888 99 99999999999999954 8999999998863 34444444433221
Q ss_pred --------------------CceEEEeec-ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccc
Q 007300 455 --------------------EKARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 513 (609)
Q Consensus 455 --------------------~~v~~~~~~-~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i 513 (609)
..|.+ ..+ +..++...|..+.++|.+|..|+++ +++||+++|+|+| .-|..++|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f-~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V 463 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAF-TTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYV 463 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEE-EecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceee
Confidence 22333 333 3336668999999999999999999 9999999999999 55679999
Q ss_pred ccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHHH
Q 007300 514 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 581 (609)
Q Consensus 514 ~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~ 581 (609)
.+++||+++ +|..+|+++|..+|.+ ...+.++...++ .++||-+.+.++|.+++
T Consensus 464 ~d~~NG~li------------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 464 EHNKNGYII------------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred EcCCCcEEe------------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 999999985 8999999999999998 778888887774 68999999999998864
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.8e-12 Score=137.28 Aligned_cols=296 Identities=15% Similarity=0.122 Sum_probs=204.1
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| -.||+|..++|.+++... ++.++.|.+|-+.+.. ..|..+ | ..
T Consensus 124 ~D~V-WVHDYhL~llp~~LR~~~------~~~~IgFFlHiPFPs~----eifr~L--P--------------------~r 170 (474)
T PRK10117 124 DDII-WIHDYHLLPFASELRKRG------VNNRIGFFLHIPFPTP----EIFNAL--P--------------------PH 170 (474)
T ss_pred CCEE-EEeccHhhHHHHHHHHhC------CCCcEEEEEeCCCCCh----HHHhhC--C--------------------Ch
Confidence 3888 999999999999999875 7899999999644311 111111 0 11
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccch--hhh----ccCCeeEecCCCCCCCcCCCCccccccccCcchh
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 377 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~~----~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~ 377 (609)
.-+-.++..+|.|-+.+..+++.+.+... .|.+.. ..+ +...+.+.|-|||++.|......
T Consensus 171 ~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~----------- 239 (474)
T PRK10117 171 DELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG----------- 239 (474)
T ss_pred HHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc-----------
Confidence 33455788999999999999988876221 122110 001 22357778899998776432110
Q ss_pred cccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC-------hhhHH
Q 007300 378 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPMEK 444 (609)
Q Consensus 378 ~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~-------~~~~~ 444 (609)
. .......+++.++ ++.+|+-+.|++.-||+..=++|++.+.+ .++.|+-+.... ..+..
T Consensus 240 -~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 240 -P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred -h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHH
Confidence 0 0112345566654 45799999999999999999999999876 267787676543 24556
Q ss_pred HHHHHHHhCCCc--------eEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCC-----ceEEcCCCCcc
Q 007300 445 QLEQLEILYPEK--------ARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLV 510 (609)
Q Consensus 445 ~l~~l~~~~~~~--------v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~ 510 (609)
+++++..+.+++ |.+. -.++.+++-.+|..||+++++|..+|+.++..|+.+|-. +.|.|...|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA 392 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchH
Confidence 666665543211 2211 124667777899999999999999999999999999965 37888888888
Q ss_pred cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHHHH
Q 007300 511 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 511 e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+.+.+ .++ |+|.|.+++|++|.++|..+..++..++.+.. ....++...-++.+++-+.++.
T Consensus 393 ~~L~~---All----------VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 393 NELTS---ALI----------VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHhCC---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 87743 454 49999999999999999986445555554322 3566787777888777776654
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.4e-13 Score=123.64 Aligned_cols=176 Identities=23% Similarity=0.305 Sum_probs=94.2
Q ss_pred EEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEEE
Q 007300 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (609)
Q Consensus 87 Il~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (609)
|+++...+ +. .||++.++.+|+++|+++||+|+++++......... ... ..
T Consensus 1 ili~~~~~-~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------------~~~-----------~~ 51 (177)
T PF13439_consen 1 ILITNIFL-PN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------------LVK-----------IF 51 (177)
T ss_dssp -EEECC-T-TS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------------EEE-----------E-
T ss_pred CEEEEecC-CC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------------ccc-----------ee
Confidence 45555554 43 799999999999999999999999998754332210 000 00
Q ss_pred EeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHH
Q 007300 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKT 246 (609)
Q Consensus 167 v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~ 246 (609)
...+.. ..............+.+.++.. +|||| |+|.+..........
T Consensus 52 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~----------~~DiV-h~~~~~~~~~~~~~~- 99 (177)
T PF13439_consen 52 VKIPYP--------------------IRKRFLRSFFFMRRLRRLIKKE----------KPDIV-HIHGPPAFWIALLAC- 99 (177)
T ss_dssp --TT-S--------------------STSS--HHHHHHHHHHHHHHHH----------T-SEE-ECCTTHCCCHHHHHH-
T ss_pred eeeecc--------------------cccccchhHHHHHHHHHHHHHc----------CCCeE-EecccchhHHHHHhc-
Confidence 000000 0111112223344455555555 49999 999876655443333
Q ss_pred hhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHH
Q 007300 247 MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYA 326 (609)
Q Consensus 247 ~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~ 326 (609)
.++|+++++|+..+...+ ...... +.......+++...+.+|.++++|+..+
T Consensus 100 --------~~~~~v~~~H~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~~ii~vS~~~~ 151 (177)
T PF13439_consen 100 --------RKVPIVYTIHGPYFERRF-------LKSKLS-------------PYSYLNFRIERKLYKKADRIIAVSESTK 151 (177)
T ss_dssp --------HCSCEEEEE-HHH--HHT-------TTTSCC-------------CHHHHHHCTTHHHHCCSSEEEESSHHHH
T ss_pred --------cCCCEEEEeCCCcccccc-------cccccc-------------hhhhhhhhhhhhHHhcCCEEEEECHHHH
Confidence 278999999975531000 000000 0000111223445788999999999999
Q ss_pred HHHhcccCCCccchhhhccCCeeEecCCCCCCCc
Q 007300 327 QELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 360 (609)
Q Consensus 327 ~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~ 360 (609)
+++.+ +|++.+ ++.+||||+|.+.|
T Consensus 152 ~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 152 DELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHH---hCCccc------CCEEEECCccHHHc
Confidence 99996 666554 99999999999877
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.9e-12 Score=139.19 Aligned_cols=435 Identities=20% Similarity=0.247 Sum_probs=267.9
Q ss_pred CccccchHHHHhhchhHHHHhCCCeEEEEeecCCC-cc-------------ccCCC------------ceE--EEEEeCC
Q 007300 96 PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK-------------DAWDT------------DVV--IELKVGD 147 (609)
Q Consensus 96 P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~-~~-------------~~~~~------------~~~--~~~~~~~ 147 (609)
|-. .||+|+........++..|...+.++..|.+ +. +.|.. ... ..+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 533 4999999999999999999999999988753 11 11211 012 2333333
Q ss_pred -EEeeEEEEEeeEcCeeEEEEeCcchhhhhc-CCCCCeeccCCCCCCCcchHHHH---HHHHHHHHHhhhhhc-cCCCCC
Q 007300 148 -KIEKVRFFHCHKRGVDRVFVDHPWFLAKVW-GKTQSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRILN-LNSNKY 221 (609)
Q Consensus 148 -~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~-~~~~~~ 221 (609)
...+++.|......+++++.+...--.+-| ...-..+|+.++ +.+|+ .+|+.+.++.+.... ....
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~~~-- 261 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLEHH-- 261 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhccc--
Confidence 556778888777777888776432111111 012236776443 33343 345666666655542 1000
Q ss_pred CCCCCceEEEecccccchHHH-HHHHhhcCCCc-------ccCceEEEEEecCccCCc--cccccccccCCcccccccc-
Q 007300 222 FSGPYDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQFKSSF- 290 (609)
Q Consensus 222 ~~~~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~~--~~~~~~~~l~~~~~~~~~~- 290 (609)
. -...++|.||-|.+++.. +++...-..++ ....-++||.|.+.+.+. |+...+..+. |..+.--.
T Consensus 262 -~-~~~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~l-pr~~~ii~~ 338 (750)
T COG0058 262 -D-LDVLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLL-PRHLQIIYE 338 (750)
T ss_pred -c-ccchhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHh-hhhhhhHHH
Confidence 0 013334889988877644 44423222222 134578999999877653 4443332211 10000000
Q ss_pred ---ccccCC-----------CCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc---CCCccchhhhccCCeeEecC
Q 007300 291 ---DFIDGY-----------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVN 353 (609)
Q Consensus 291 ---~~~~~~-----------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~n 353 (609)
.|.... ..+... +++--.++..|..+..||.-..+.+++.. ..++.+ .+|.-+.|
T Consensus 339 in~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p------~~i~nvTN 410 (750)
T COG0058 339 INARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYP------EKINNVTN 410 (750)
T ss_pred HHhhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCc------cccccccC
Confidence 000000 000000 45555677888899999998877765532 122223 38999999
Q ss_pred CCCCCCcCCCCccccccccCcc--------------------------hhcccchHHHH----HHHHHhCCCCCCCCcEE
Q 007300 354 GMDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKE----ALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 354 Gvd~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~~----~~~~~~gl~~~~~~~~i 403 (609)
||....|--...+-+...++.. .+...|...+. ....+.|+..+++...+
T Consensus 411 GIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd 490 (750)
T COG0058 411 GITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFD 490 (750)
T ss_pred CcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCccee
Confidence 9999988655444444444443 12233333332 23445678888899999
Q ss_pred EEEeccccccCHHHHHHHHhhc----cc---CCeEEEEEeCCC------hhhHHHHHHHHHhCC--CceEEEeecChHHH
Q 007300 404 GFIGRLEEQKGSDILAAAIPHF----IK---ENVQIIVLGTGK------KPMEKQLEQLEILYP--EKARGVAKFNIPLA 468 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l----~~---~~~~lvivG~g~------~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 468 (609)
+++-|+.++|.+.+.+.-+..+ ++ +.+++++.|.-. +.+.+.+...+...+ .+|+++..|+...+
T Consensus 491 ~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA 570 (750)
T COG0058 491 GQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLA 570 (750)
T ss_pred eeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHH
Confidence 9999999999887765544443 32 468888888754 344555556555433 46899999999999
Q ss_pred HHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCcccccc--cCcceeEeccccccccc-----CCCC-CHH
Q 007300 469 HMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEA-----VDPV-DVA 538 (609)
Q Consensus 469 ~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~--~~~~G~l~~~~~~~~~~-----v~~~-d~~ 538 (609)
..++.+||+-...|+. |++|.+-+-+|..|.+-|+|--|...|+.+ ++.|||+||....+.+. .++. +..
T Consensus 571 ~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~ 650 (750)
T COG0058 571 ELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYY 650 (750)
T ss_pred HhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHH
Confidence 9999999999998875 999999999999999999999999999997 88999999865543222 2222 444
Q ss_pred HHHHHHHHHHHh
Q 007300 539 AVSTTVRRALAT 550 (609)
Q Consensus 539 ~la~~I~~ll~~ 550 (609)
.+...|..+++.
T Consensus 651 ~~~~~v~~~~~~ 662 (750)
T COG0058 651 ELENEVKPVLDE 662 (750)
T ss_pred HHhHHHHHHHHH
Confidence 555566666653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.1e-11 Score=135.81 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=201.7
Q ss_pred ceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhH
Q 007300 227 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 306 (609)
Q Consensus 227 DvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (609)
|+| ..||+|..++|.+|+... +++++.|.+|-+.+.. ..+..+. ...
T Consensus 203 d~V-WVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~--------------eifr~LP------------~r~ 249 (854)
T PLN02205 203 DFV-WIHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFPSS--------------EIYKTLP------------IRE 249 (854)
T ss_pred CEE-EEeCchhhHHHHHHHhhC------CCCcEEEEecCCCCCh--------------HHHhhCC------------cHH
Confidence 888 999999999999998874 7899999999654311 1111110 123
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccchh------h---hccCCeeEecCCCCCCCcCCCCccccccccCcc
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN------I---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 375 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~------~---~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~ 375 (609)
-+-.++..||.|-+.+..+++.+.+... .|.+.+. + -+..++.+.|-|||+..|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 3456788999999999999998887321 1322111 0 023357778889998776432110
Q ss_pred hhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCC-------hhh
Q 007300 376 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPM 442 (609)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~-------~~~ 442 (609)
........+++++++- .++.+|+-+.|++..||+..=++|++++.+ | ++.|+-+.... ..+
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 0011123445666542 245799999999999999999999999865 3 56777665432 234
Q ss_pred HHHHHHHHHh----CCC----ceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCC--------------
Q 007300 443 EKQLEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 499 (609)
Q Consensus 443 ~~~l~~l~~~----~~~----~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~-------------- 499 (609)
+.+++++..+ ++. -|.+. -.++.++.-.+|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 5555555543 331 13332 234667777899999999999999999999999998753
Q ss_pred -----ceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhCCchHH
Q 007300 500 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 573 (609)
Q Consensus 500 -----PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~ 573 (609)
+.|.|...|....+.+ .++ |+|.|.+++|++|.++|..+..++..++.+.. ....++....
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~~---Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLSG---AIR----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhCc---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 3677777666665532 344 49999999999999999986555555544322 3466777777
Q ss_pred HHHHHHHHHHHHH
Q 007300 574 AKKWEETLLNLEV 586 (609)
Q Consensus 574 a~~~~~~~~~l~~ 586 (609)
++.++.-++++..
T Consensus 542 ~~~fl~~l~~~~~ 554 (854)
T PLN02205 542 ARSFLQDLERTCR 554 (854)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777766643
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-12 Score=118.79 Aligned_cols=160 Identities=24% Similarity=0.244 Sum_probs=86.4
Q ss_pred chHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEEEEeCcchhhhhcCCC
Q 007300 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (609)
Q Consensus 101 GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~ 180 (609)
||++.++.+|+++|+++||+|+|+++..+...+. ....|+.++.+..+....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~------ 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPW------ 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSS------
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccch------
Confidence 8999999999999999999999999875433220 123466666654322110
Q ss_pred CCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEE
Q 007300 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVV 260 (609)
Q Consensus 181 ~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v 260 (609)
.+. .. + +...+..++... ..+||+| |+|.+...++..+++.. .++|+|
T Consensus 53 --~~~----------~~-~---~~~~~~~~l~~~--------~~~~Dvv-~~~~~~~~~~~~~~~~~-------~~~p~v 100 (160)
T PF13579_consen 53 --PLR----------LL-R---FLRRLRRLLAAR--------RERPDVV-HAHSPTAGLVAALARRR-------RGIPLV 100 (160)
T ss_dssp --GGG----------HC-C---HHHHHHHHCHHC--------T---SEE-EEEHHHHHHHHHHHHHH-------HT--EE
T ss_pred --hhh----------hH-H---HHHHHHHHHhhh--------ccCCeEE-EecccchhHHHHHHHHc-------cCCcEE
Confidence 000 00 0 112222233111 1259999 99987766666666533 589999
Q ss_pred EEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccch
Q 007300 261 FCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD 340 (609)
Q Consensus 261 ~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 340 (609)
+++|+...... ..+. ......+++..++.+|.++++|+..++.+.+ +|++.+
T Consensus 101 ~~~h~~~~~~~------------~~~~-------------~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~~~~ 152 (160)
T PF13579_consen 101 VTVHGTLFRRG------------SRWK-------------RRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGVPPD 152 (160)
T ss_dssp EE-SS-T------------------HH-------------HHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H---GG
T ss_pred EEECCCchhhc------------cchh-------------hHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCCCCC
Confidence 99996432110 0000 0012244677899999999999999999997 677766
Q ss_pred hhhccCCeeEecCC
Q 007300 341 NIIRKTGIKGIVNG 354 (609)
Q Consensus 341 ~~~~~~~i~vI~nG 354 (609)
++.+||||
T Consensus 153 ------ri~vipnG 160 (160)
T PF13579_consen 153 ------RIHVIPNG 160 (160)
T ss_dssp ------GEEE----
T ss_pred ------cEEEeCcC
Confidence 99999998
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-10 Score=120.29 Aligned_cols=295 Identities=18% Similarity=0.222 Sum_probs=196.6
Q ss_pred ceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhH
Q 007300 227 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 306 (609)
Q Consensus 227 DvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (609)
|+| -.||+|..++|.+++... +..++.|.+|-+.+.. ..+..+. ...
T Consensus 149 DiI-WVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPfPss--------------Evfr~lP------------~r~ 195 (486)
T COG0380 149 DII-WVHDYHLLLVPQMLRERI------PDAKIGFFLHIPFPSS--------------EVFRCLP------------WRE 195 (486)
T ss_pred CEE-EEEechhhhhHHHHHHhC------CCceEEEEEeCCCCCH--------------HHHhhCc------------hHH
Confidence 998 999999999999999875 7889999999654311 1111111 112
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccCC--C------ccchhh-hccCCeeEecCCCCCCCcCCCCccccccccCcchh
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGEDK--G------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 377 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~--g------~~~~~~-~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~ 377 (609)
-+-.++..||.|-+.++.+++.+.+.... + +..+.. -+..++..+|-|+|+..|.-.... +
T Consensus 196 eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-------~--- 265 (486)
T COG0380 196 EILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-------P--- 265 (486)
T ss_pred HHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------C---
Confidence 23457789999999999999987763211 1 111100 011367778999998877543210 0
Q ss_pred cccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC----h---hhHH
Q 007300 378 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PMEK 444 (609)
Q Consensus 378 ~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~----~---~~~~ 444 (609)
.....-.++++.++ .++.+|+.+.|++.-||+..=+.|+.+|.. .++.++-++... + .+..
T Consensus 266 --~v~~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~ 339 (486)
T COG0380 266 --SVQEKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRL 339 (486)
T ss_pred --chhhHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHH
Confidence 00012344555554 236799999999999999999999999975 267777777654 2 2455
Q ss_pred HHHHHHHh----CCC----ceEEEe-ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcC----CceEEcCCCCccc
Q 007300 445 QLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTGGLVD 511 (609)
Q Consensus 445 ~l~~l~~~----~~~----~v~~~~-~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G----~PvI~s~~gg~~e 511 (609)
+++++..+ ++. -+.++. ..+.+++..++..||+++++|..||+.++..|+.+|- -|.|-|...|...
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~ 419 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAAS 419 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchh
Confidence 55555543 331 122222 2467778889999999999999999999999999883 4678888877777
Q ss_pred ccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHH
Q 007300 512 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 512 ~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs~~~~a~~~~~~~~~ 583 (609)
.+.+ .+++ +|.|.++++++|.++|.....++..++.... ....++....+..+++-+..
T Consensus 420 ~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 420 ELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 7765 4544 9999999999999999985333333333221 13445655555555554443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-08 Score=107.39 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=98.6
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCH-HHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeec
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~-~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
+..++.++++. +.++|+.+|.-...+.+ +.+.+++..+. .++++++ +|... +++.+... . ++.. ..|
T Consensus 173 ~~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--~~~~~~~~----~-~~~~-~~f 241 (352)
T PRK12446 173 EKGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--LDDSLQNK----E-GYRQ-FEY 241 (352)
T ss_pred hHHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--HHHHHhhc----C-CcEE-ecc
Confidence 34456677654 44777777664445555 34445555553 3477665 45432 44443331 1 1222 245
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC-----C----cccccccCcceeEecccccccccCCC
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~i~~~~~G~l~~~~~~~~~~v~~ 534 (609)
..+.++.+|+.||++|.- +-+.++.|++++|+|.|.-... + ..+.+.+...+..+ .-+.
T Consensus 242 ~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~ 309 (352)
T PRK12446 242 VHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEED 309 (352)
T ss_pred hhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhc
Confidence 445677899999988843 4577899999999999988542 1 22244444455543 0123
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 535 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 535 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
-+++.+.++|.+++.+ ++.+.+ ..+.+....-+++..+++.
T Consensus 310 ~~~~~l~~~l~~ll~~--~~~~~~-----~~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 310 VTVNSLIKHVEELSHN--NEKYKT-----ALKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHH-----HHHHcCCCCHHHHHHHHHH
Confidence 3678999999999876 444432 2344666666666666554
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2e-09 Score=120.83 Aligned_cols=288 Identities=18% Similarity=0.220 Sum_probs=187.9
Q ss_pred EEEecccccchHHH-HHHHhhcCCCc-------ccCceEEEEEecCccCC--ccccccccccCCcc----------cccc
Q 007300 229 VFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFKS 288 (609)
Q Consensus 229 V~h~h~~~~~~~~~-~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~--~~~~~~~~~l~~~~----------~~~~ 288 (609)
++|.||-|.+++.. +++......++ .....++||.|.+.+.+ .|+.+.+..+. |+ +|..
T Consensus 316 ~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~l-pr~l~Ii~eIn~~fl~ 394 (815)
T PRK14986 316 AIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKIL-PRHLQIIFEINDYFLK 394 (815)
T ss_pred EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHc-cHhhhHHHHHHHHHHH
Confidence 44999998887644 44433221111 24567899999987655 35544433221 11 1111
Q ss_pred ccc--ccc-----CCC---CCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc---CCCccchhhhccCCeeEecCCC
Q 007300 289 SFD--FID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVNGM 355 (609)
Q Consensus 289 ~~~--~~~-----~~~---~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~nGv 355 (609)
.+. +.. +.. ..-.+..+++-..++..|..|..||.-..+.+.+.- .+.+- +.++.-|.|||
T Consensus 395 ~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~------P~kf~niTNGV 468 (815)
T PRK14986 395 TLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIF------PGRFCNVTNGV 468 (815)
T ss_pred HHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhC------CCcccccCCCC
Confidence 000 000 000 000012456667778889999999988777653311 11111 23677799999
Q ss_pred CCCCcC----CCCc----cccccc--------------cCc----chhcccchHHHHH----HHHHhCCCCCCCCcEEEE
Q 007300 356 DVQEWN----PLTD----KYIGVK--------------YDA----STVMDAKPLLKEA----LQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 356 d~~~~~----p~~~----~~~~~~--------------~~~----~~~~~~~~~~~~~----~~~~~gl~~~~~~~~i~~ 405 (609)
....|- |.-. .+|... .+. ..+.+.+...|.. ++++.|...+++...+++
T Consensus 469 ~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~q 548 (815)
T PRK14986 469 TPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQ 548 (815)
T ss_pred ChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeee
Confidence 988885 2211 111100 111 1133444555544 356779989999999999
Q ss_pred EeccccccCHHH-HHHHHhhc---cc-C-----CeEEEEEeCCC------hhhHHHHHHHHH------hCCC--ceEEEe
Q 007300 406 IGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEI------LYPE--KARGVA 461 (609)
Q Consensus 406 iGrl~~~Kg~~~-ll~a~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~------~~~~--~v~~~~ 461 (609)
+-|+.++|...+ ++..+.++ ++ + +.++++.|.-. +...+.+.+++. ...+ +|++..
T Consensus 549 akR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFle 628 (815)
T PRK14986 549 IKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIP 628 (815)
T ss_pred ehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeC
Confidence 999999999998 66665544 33 2 58899999854 345556666665 2333 788999
Q ss_pred ecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEec
Q 007300 462 KFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 523 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~ 523 (609)
.|+...+..++.+||+....|+. |++|.+-+-+|..|.+.+++--|...|+.++ +.|||.||
T Consensus 629 nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 629 NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 99999999999999999998875 9999999999999999999999999999986 78999996
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.5e-09 Score=116.50 Aligned_cols=294 Identities=20% Similarity=0.242 Sum_probs=192.7
Q ss_pred CCceEEEecccccchH-HHHHHHhhcCCCc-------ccCceEEEEEecCccCC--ccccccccccCCccccc--cc--c
Q 007300 225 PYDVVFVANDWHTSLI-PCYLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK--SS--F 290 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~-~~~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~--~~~~~~~~~l~~~~~~~--~~--~ 290 (609)
++.+| |.||-|.+++ |-+++......++ .....++||.|.+.+.+ .|+.+.+..+ +|+.+. .. .
T Consensus 300 ~~~~i-hlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~ 377 (797)
T cd04300 300 DKVAI-QLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINR 377 (797)
T ss_pred CceEE-EecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHH
Confidence 57777 9999888776 4444433321111 24567899999986655 3444433322 111110 00 0
Q ss_pred cccc--------------C--CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC
Q 007300 291 DFID--------------G--YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354 (609)
Q Consensus 291 ~~~~--------------~--~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG 354 (609)
.|.. . ..+.-....+++-..++..|..|-.||.-..+.+++....... . +-+.++.-+.||
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~--~-l~P~kf~n~TNG 454 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFY--E-LYPEKFNNKTNG 454 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHH--h-hCCCccCCcCCC
Confidence 0000 0 0000011346777778889999999999888777753110000 0 112377889999
Q ss_pred CCCCCcCCCCc--------cccccc-------------cC-c----chhcccchHHHHHH----HHHhCCCCCCCCcEEE
Q 007300 355 MDVQEWNPLTD--------KYIGVK-------------YD-A----STVMDAKPLLKEAL----QAEVGLPVDRNIPVIG 404 (609)
Q Consensus 355 vd~~~~~p~~~--------~~~~~~-------------~~-~----~~~~~~~~~~~~~~----~~~~gl~~~~~~~~i~ 404 (609)
|....|--... ..|... |- . ..+...|...|..+ ++..|...+++...++
T Consensus 455 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdv 534 (797)
T cd04300 455 ITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDV 534 (797)
T ss_pred CCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEE
Confidence 99988751111 111100 11 1 23445555555544 5678998999999999
Q ss_pred EEeccccccCHHH-HHHHHhhc---cc-C-----CeEEEEEeCCC------hhhHHHHHHHHHh------CCC--ceEEE
Q 007300 405 FIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KARGV 460 (609)
Q Consensus 405 ~iGrl~~~Kg~~~-ll~a~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~~~ 460 (609)
++-|+.++|...+ ++..+.++ ++ + +.++++.|.-. +...+.+..++.. ..+ +|++.
T Consensus 535 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 614 (797)
T cd04300 535 QVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFL 614 (797)
T ss_pred EeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEe
Confidence 9999999999998 66665544 33 2 47888998754 3445556565553 223 68899
Q ss_pred eecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEec
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 523 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~ 523 (609)
..|+...+..++.+||+-...|+. |++|..-+-+|..|.+.++|--|...|+.++ ++|+|+||
T Consensus 615 enY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 615 PNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred CCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 999999999999999999998875 9999999999999999999999999999987 78999996
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-07 Score=99.59 Aligned_cols=342 Identities=17% Similarity=0.134 Sum_probs=185.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCe-EEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
|+|++.... +||==.....++++|.++|++ |.++...+. . ..+.....++.
T Consensus 1 ~~ivl~~gG------TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~--------------------e~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAGG------TGGHVFPALALAEELAKRGWEQVIVLGTGDG--L--------------------EAFLVKQYGIE 52 (357)
T ss_pred CeEEEEeCC------CccchhHHHHHHHHHHhhCccEEEEeccccc--c--------------------eeeeccccCce
Confidence 455555532 566666677799999999995 555533311 0 11111222667
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.++...+..+ .. +. +......+++...++.+.+... +||+|+-++.+.+.+ +.+
T Consensus 53 ~~~I~~~~~~~~-------~~--------~~-~~~~~~~~~~~~~~a~~il~~~-------kPd~vig~Ggyvs~P-~~~ 108 (357)
T COG0707 53 FELIPSGGLRRK-------GS--------LK-LLKAPFKLLKGVLQARKILKKL-------KPDVVIGTGGYVSGP-VGI 108 (357)
T ss_pred EEEEeccccccc-------Cc--------HH-HHHHHHHHHHHHHHHHHHHHHc-------CCCEEEecCCccccH-HHH
Confidence 777765433221 00 11 2322233444444444443322 699995445444443 333
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
.... .++|++....|..+ | ...+...+.++.|.+.-+
T Consensus 109 Aa~~-------~~iPv~ihEqn~~~-G-----------------------------------~ank~~~~~a~~V~~~f~ 145 (357)
T COG0707 109 AAKL-------LGIPVIIHEQNAVP-G-----------------------------------LANKILSKFAKKVASAFP 145 (357)
T ss_pred HHHh-------CCCCEEEEecCCCc-c-----------------------------------hhHHHhHHhhceeeeccc
Confidence 3332 58999877666443 1 111233556777766544
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
.. . -+.+ +.++.+.-|.+..+... .. ....+..... ++++|
T Consensus 146 ~~-~-------~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~~~i 186 (357)
T COG0707 146 KL-E-------AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DKKTI 186 (357)
T ss_pred cc-c-------ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CCcEE
Confidence 41 1 1111 11566677777665543 11 1112222221 45677
Q ss_pred EEEeccccccCHHHH-HHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 404 GFIGRLEEQKGSDIL-AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~l-l~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
+.+|.-..-+.+..+ .++...+. ++++++....... +++....+. +++. .....|..+ +..+|+.||+++.=
T Consensus 187 lV~GGS~Ga~~ln~~v~~~~~~l~-~~~~v~~~~G~~~-~~~~~~~~~-~~~~--~~v~~f~~d-m~~~~~~ADLvIsR- 259 (357)
T COG0707 187 LVTGGSQGAKALNDLVPEALAKLA-NRIQVIHQTGKND-LEELKSAYN-ELGV--VRVLPFIDD-MAALLAAADLVISR- 259 (357)
T ss_pred EEECCcchhHHHHHHHHHHHHHhh-hCeEEEEEcCcch-HHHHHHHHh-hcCc--EEEeeHHhh-HHHHHHhccEEEeC-
Confidence 666664433333333 34444443 3677765543321 333333333 2332 333445444 55799999999943
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCCCc--------ccccccCcceeEecccccccccCCCCC--HHHHHHHHHHHHHhhC
Q 007300 483 RFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATYG 552 (609)
Q Consensus 483 ~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~i~~~~~G~l~~~~~~~~~~v~~~d--~~~la~~I~~ll~~~~ 552 (609)
+=++++.|..++|+|.|--..+.. ...+.+...+..+ +..+ ++++.+.|.+++.+
T Consensus 260 ---aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~~-- 324 (357)
T COG0707 260 ---AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLSN-- 324 (357)
T ss_pred ---CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhcC--
Confidence 356899999999999987764332 3344455566655 4444 89999999999997
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
++.+.+|..++ +.+.-...++++.+.....
T Consensus 325 ~~~l~~m~~~a--~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 325 PEKLKAMAENA--KKLGKPDAAERIADLLLAL 354 (357)
T ss_pred HHHHHHHHHHH--HhcCCCCHHHHHHHHHHHH
Confidence 77788887764 4455555566666655544
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=120.11 Aligned_cols=291 Identities=17% Similarity=0.228 Sum_probs=187.7
Q ss_pred CCceEEEecccccchH-HHHHHHhhcCCCc-------ccCceEEEEEecCccCCc--cccccccccCCccccc----ccc
Q 007300 225 PYDVVFVANDWHTSLI-PCYLKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQFK----SSF 290 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~-~~~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~~--~~~~~~~~l~~~~~~~----~~~ 290 (609)
++.+| |.||-|.+++ |-+++......++ .....++||.|.+-+.+. |+.+.+..+ +|+.+. ..-
T Consensus 302 ~~~~i-hlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~-Lpr~~~ii~~in~ 379 (798)
T PRK14985 302 DYEVI-QLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSL-LPRHMQIIKEINT 379 (798)
T ss_pred CCcEE-EecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHH-hHHHHHHHHHHHH
Confidence 56777 9999888776 4444433321111 245578999999866553 444433321 111110 000
Q ss_pred ccc----cCCCC---------CcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccC---CCccchhhhccCCeeEecCC
Q 007300 291 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 354 (609)
Q Consensus 291 ~~~----~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~nG 354 (609)
.|+ ..+.. .+....+++-..++..|..|-.||.-..+.+.+.-. +.+- +.++.-|.||
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~------p~kf~nvTNG 453 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLW------PNKFHNVTNG 453 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhC------CCccCCcCCC
Confidence 010 00000 011123566666777888888888876665443111 1111 2377889999
Q ss_pred CCCCCcC----CCC----ccccc-------------cccCc-ch----hcccchHHHHH----HHHHhCCCCCCCCcEEE
Q 007300 355 MDVQEWN----PLT----DKYIG-------------VKYDA-ST----VMDAKPLLKEA----LQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 355 vd~~~~~----p~~----~~~~~-------------~~~~~-~~----~~~~~~~~~~~----~~~~~gl~~~~~~~~i~ 404 (609)
|....|- |.- +.+|. .+|.+ .. +.+.+...|.. ++++.|...+++...++
T Consensus 454 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 533 (798)
T PRK14985 454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533 (798)
T ss_pred cCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchh
Confidence 9998884 321 11111 11222 22 23444444444 45777888889989999
Q ss_pred EEeccccccCHHH-HHHHHhhccc----C-----CeEEEEEeCCC------hhhHHHHHHHHHhC------CC--ceEEE
Q 007300 405 FIGRLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGK------KPMEKQLEQLEILY------PE--KARGV 460 (609)
Q Consensus 405 ~iGrl~~~Kg~~~-ll~a~~~l~~----~-----~~~lvivG~g~------~~~~~~l~~l~~~~------~~--~v~~~ 460 (609)
++-|+.++|...+ ++..+..+.+ + +.++++.|.-. +...+.+..++... .+ +|++.
T Consensus 534 q~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 9999999999988 7666555432 2 47899999854 23445555555432 22 68899
Q ss_pred eecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEec
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 523 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~ 523 (609)
..|+...+..++.+||+....|+. |++|..-+-+|..|.+.++|--|...|+.++ +.|||+||
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 999999999999999999998875 9999999999999999999999999999886 78999996
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=95.51 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=78.2
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 556 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 556 (609)
+++.|++.++++..++|+|+||+|+|+++.+++.+++.++.+++.+ + |++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 4677898999999999999999999999999999999999899976 3 999999999999998 6666
Q ss_pred HHHHHHH---HHhhCCchHHHHHHHH
Q 007300 557 AEMMKNG---MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 557 ~~~~~~~---~~~~fs~~~~a~~~~~ 579 (609)
+++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 6666555 6789999999999864
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.9e-09 Score=120.64 Aligned_cols=292 Identities=21% Similarity=0.239 Sum_probs=191.9
Q ss_pred CCceEEEecccccchHHH-HHHHhhcCCCc-------ccCceEEEEEecCccCC--cccccccccc---------CCccc
Q 007300 225 PYDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 285 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~--~~~~~~~~~l---------~~~~~ 285 (609)
++.+| |.||-|.+++.. +++......++ .....++||.|.+.+.+ .|+.+.+..+ ++..+
T Consensus 297 ~~~~i-hlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKVAI-QLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cceEE-EecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 46777 999988877644 44433222111 24567899999986655 3444443321 11111
Q ss_pred cccccc--ccc------C--CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc---CCCccchhhhccCCeeEec
Q 007300 286 FKSSFD--FID------G--YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 352 (609)
Q Consensus 286 ~~~~~~--~~~------~--~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~ 352 (609)
|..... +.. . ..+.-....+++-..++..|..|-.||.-..+.+++.. .+.+= +.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCccCCcC
Confidence 111000 000 0 00000012467777788899999999998887766411 11111 23778899
Q ss_pred CCCCCCCcCCCCc--------ccccc-------------cc-Cc----chhcccchHHHHHH----HHHhCCCCCCCCcE
Q 007300 353 NGMDVQEWNPLTD--------KYIGV-------------KY-DA----STVMDAKPLLKEAL----QAEVGLPVDRNIPV 402 (609)
Q Consensus 353 nGvd~~~~~p~~~--------~~~~~-------------~~-~~----~~~~~~~~~~~~~~----~~~~gl~~~~~~~~ 402 (609)
|||....|--... ++|.. +| +. ..+...|...|..+ +++.|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 9999988852111 11110 12 22 33445555555544 56788888899899
Q ss_pred EEEEeccccccCHHH-HHHHHhhc---cc-C-----CeEEEEEeCCC------hhhHHHHHHHHHh------CCC--ceE
Q 007300 403 IGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KAR 458 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~-ll~a~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~ 458 (609)
++++-|+.++|...+ ++..+..+ ++ + +.++++.|.-. +...+.+..++.. ..+ +|+
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999988 66665544 33 2 56899999854 3445555555532 223 788
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEec
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 523 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~ 523 (609)
+...|+...+..++.+||+-...|+. |++|..-+-+|..|.+.++|--|...|+.++ ++|+|+||
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 99999999999999999999998875 9999999999999999999999999999987 78999996
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.5e-09 Score=113.96 Aligned_cols=171 Identities=8% Similarity=0.013 Sum_probs=130.5
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHh
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 392 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (609)
.+.|.||+.++...+.+.+.... ..++.+||-|+=.. + +.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~-~~----------------------------- 277 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-F-KK----------------------------- 277 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-e-cc-----------------------------
Confidence 57889999998877777653211 12566677665311 1 11
Q ss_pred CCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHH
Q 007300 393 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470 (609)
Q Consensus 393 gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 470 (609)
.++..+-+++++. +..++++..|.+ |+++|.| |.+.+ +...|.++ .++ .+++.+..+....+..
T Consensus 278 ---~~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 278 ---DNKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred ---ccCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHH
Confidence 0112245666662 888899998866 8999999 77663 45788888 666 4577778888777888
Q ss_pred HHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
++..||+++..|..|++++++.||+..|+|+++-+. -|..+++.+ |.++ +.+|+++|+++|.+++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999985 456677776 6766 99999999999999998
Q ss_pred h
Q 007300 550 T 550 (609)
Q Consensus 550 ~ 550 (609)
+
T Consensus 411 d 411 (438)
T TIGR02919 411 D 411 (438)
T ss_pred C
Confidence 8
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.2e-08 Score=92.54 Aligned_cols=182 Identities=19% Similarity=0.223 Sum_probs=111.1
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeEE
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (609)
||++|++--.| ...||.++++.+|+..|+++||+|+|.|........ .....|++.+
T Consensus 3 kIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~----------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK----------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC----------------------CcccCCeEEE
Confidence 79999988677 578999999999999999999999999976321111 1234577777
Q ss_pred EEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccc-cchHHHHH
Q 007300 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWH-TSLIPCYL 244 (609)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~-~~~~~~~l 244 (609)
.+..+..- ....+.+...++..++.....+ .-+.||| +.+... .+++..++
T Consensus 60 ~i~~~~~g----------------------~~~si~yd~~sl~~al~~~~~~-----~~~~~ii-~ilg~~~g~~~~~~~ 111 (185)
T PF09314_consen 60 YIPAPKNG----------------------SAESIIYDFLSLLHALRFIKQD-----KIKYDII-LILGYGIGPFFLPFL 111 (185)
T ss_pred EeCCCCCC----------------------chHHHHHHHHHHHHHHHHHhhc-----cccCCEE-EEEcCCccHHHHHHH
Confidence 77543210 0112222233334443221100 0036888 776655 33444444
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+...+ .+.|+++.+|.+++.-. +.+.+. .......++...+.||.+|+.|+.
T Consensus 112 r~~~~-----~g~~v~vN~DGlEWkR~-------KW~~~~----------------k~~lk~~E~~avk~ad~lIaDs~~ 163 (185)
T PF09314_consen 112 RKLRK-----KGGKVVVNMDGLEWKRA-------KWGRPA----------------KKYLKFSEKLAVKYADRLIADSKG 163 (185)
T ss_pred Hhhhh-----cCCcEEECCCcchhhhh-------hcCHHH----------------HHHHHHHHHHHHHhCCEEEEcCHH
Confidence 43321 37799999997765211 000000 001122346678899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCC
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 356 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd 356 (609)
..+++.+. ++. .+.++|++|.|
T Consensus 164 I~~y~~~~--y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 164 IQDYIKER--YGR--------KKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHH--cCC--------CCcEEecCCCC
Confidence 99999973 431 27899999986
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-07 Score=104.01 Aligned_cols=289 Identities=19% Similarity=0.248 Sum_probs=165.4
Q ss_pred eEEEecccccchH-HHHHHHhhcCCCc-------ccCceEEEEEecCccCC--ccccccccccCCcc----------ccc
Q 007300 228 VVFVANDWHTSLI-PCYLKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 287 (609)
Q Consensus 228 vV~h~h~~~~~~~-~~~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~--~~~~~~~~~l~~~~----------~~~ 287 (609)
+++|.||-|.+++ +-.++......++ ....-++||.|.+.+.+ +|+.+.+..+ +|+ +|.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 4459999888876 4455544433333 23447899999987765 3554443321 111 111
Q ss_pred ccc--------cccc--CCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccC---CCccchhhhccCCeeEecCC
Q 007300 288 SSF--------DFID--GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 354 (609)
Q Consensus 288 ~~~--------~~~~--~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~nG 354 (609)
..+ +... +....-....+++-..++..|..+-.||.-..+.+++... +.+.+ .++.-|.||
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P------~kf~nvTNG 368 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWP------EKFGNVTNG 368 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSG------GGEEE----
T ss_pred HHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCC------ceeeccccC
Confidence 100 0000 0000001235677788899999999999988887665221 12222 379999999
Q ss_pred CCCCCcCCCCc--------ccccccc--Ccch----------------hcccchHHH----HHHHHHhCCCCCCCCcEEE
Q 007300 355 MDVQEWNPLTD--------KYIGVKY--DAST----------------VMDAKPLLK----EALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 355 vd~~~~~p~~~--------~~~~~~~--~~~~----------------~~~~~~~~~----~~~~~~~gl~~~~~~~~i~ 404 (609)
|....|-.... +++...+ |++. +...|...| +.++++.|...+++...++
T Consensus 369 Vh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv 448 (713)
T PF00343_consen 369 VHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDV 448 (713)
T ss_dssp B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEE
T ss_pred ccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhh
Confidence 99988843211 1211111 1111 112222223 2345677887788888999
Q ss_pred EEeccccccCHHH-HH---HHHhhccc------CCeEEEEEeCCCh------hhHHHHHHHHH---h---CCC--ceEEE
Q 007300 405 FIGRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---L---YPE--KARGV 460 (609)
Q Consensus 405 ~iGrl~~~Kg~~~-ll---~a~~~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~---~~~--~v~~~ 460 (609)
++-|+.++|...+ ++ +-+.++++ .++++++.|.-.+ .+.+.+.+++. . ..+ +|++.
T Consensus 449 ~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFl 528 (713)
T PF00343_consen 449 QARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFL 528 (713)
T ss_dssp EES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEE
T ss_pred hhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEee
Confidence 9999999999888 33 33444443 2688999998542 34444545543 1 223 68899
Q ss_pred eecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEec
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 523 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~ 523 (609)
..|+...+..++.++||.+..|+. |++|.+-+-+|..|.+-+++--|...|+.++ ..|.|+||
T Consensus 529 enYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 529 ENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp TT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred cCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 999999999999999999999875 9999999999999999999999999998864 46899996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.67 E-value=5e-06 Score=88.35 Aligned_cols=214 Identities=14% Similarity=0.141 Sum_probs=129.4
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecC-CCCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~n-Gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
+.|+..++.++..++.+.+ .|.+.+ ++.++-| ++|.-.+.... .+..+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHH
Confidence 4578888999999998876 566544 6766654 55533221110 14566778
Q ss_pred hCCCCCCCCcEEEEEeccc--cc---cCHHHHHHHHhhcccCCeEEEEE-eC-CChhhHHHHHHHHHhCCCceEEEeecC
Q 007300 392 VGLPVDRNIPVIGFIGRLE--EQ---KGSDILAAAIPHFIKENVQIIVL-GT-GKKPMEKQLEQLEILYPEKARGVAKFN 464 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~--~~---Kg~~~ll~a~~~l~~~~~~lviv-G~-g~~~~~~~l~~l~~~~~~~v~~~~~~~ 464 (609)
+|++.+. ..+++.+-+-+ .. +.+..+++++..+. .++.++.- ++ +.+...+.++++... ..++.......
T Consensus 195 lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 8875332 23334444432 22 34555555555542 24433221 22 223455566666432 23577777778
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
..+...+++.||+++--| .|.. .||.++|+|+|+ .+.-+|.+..+.+.+++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 888888999999999443 2333 899999999994 45678888877777753 56899999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHH
Q 007300 545 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 580 (609)
Q Consensus 545 ~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~ 580 (609)
.++++ ...+..+.. ....|.....+++..++
T Consensus 334 ~~~~~---~~~~~~~~~--~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSLKN--VKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHHhh--CCCCCCCChHHHHHHHh
Confidence 99543 222222211 23456666666766654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.58 E-value=5e-06 Score=86.36 Aligned_cols=295 Identities=18% Similarity=0.176 Sum_probs=160.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++=-.. +| --.+...+...|.++||+|.|.+..++...+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 33 3567888999999999999999988765444211 113444
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
..+.. .|..+++ +.........++.+..... +||++ .++....+ + ..
T Consensus 52 ~~iG~----------~g~~~~~------------Kl~~~~~R~~~l~~~~~~~-------~pDv~-is~~s~~a--~-~v 98 (335)
T PF04007_consen 52 IVIGK----------HGDSLYG------------KLLESIERQYKLLKLIKKF-------KPDVA-ISFGSPEA--A-RV 98 (335)
T ss_pred EEEcC----------CCCCHHH------------HHHHHHHHHHHHHHHHHhh-------CCCEE-EecCcHHH--H-HH
Confidence 44421 1111121 1111222222333332211 59998 55432222 1 11
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
... .++|.|....+... ....+..+..||.+++++-.
T Consensus 99 a~~-------lgiP~I~f~D~e~a------------------------------------~~~~~Lt~Pla~~i~~P~~~ 135 (335)
T PF04007_consen 99 AFG-------LGIPSIVFNDTEHA------------------------------------IAQNRLTLPLADVIITPEAI 135 (335)
T ss_pred HHH-------hCCCeEEEecCchh------------------------------------hccceeehhcCCeeECCccc
Confidence 111 48898877664110 00012245579999988776
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEe-cCCCCCCC----cCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI-~nGvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
-...+.+ +|.. + .+. +||++... |.| ...+.+++|+..
T Consensus 136 ~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d~~vl~~lg~~~--- 178 (335)
T PF04007_consen 136 PKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------DPEVLKELGLDD--- 178 (335)
T ss_pred CHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------ChhHHHHcCCCC---
Confidence 5555554 4533 2 234 77776433 333 245677888652
Q ss_pred CcEEEEEecccccc-----C-HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH
Q 007300 400 IPVIGFIGRLEEQK-----G-SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 400 ~~~i~~iGrl~~~K-----g-~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~ 473 (609)
.+.|+. |.++.+ | -..+-+.++.|.+..-.+|++-...+ . .++..+++ +... -..-+.+.++.
T Consensus 179 ~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~----~~~~~~~~--~~i~--~~~vd~~~Ll~ 247 (335)
T PF04007_consen 179 EPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-Q----RELFEKYG--VIIP--PEPVDGLDLLY 247 (335)
T ss_pred CCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-h----hhHHhccC--cccc--CCCCCHHHHHH
Confidence 244442 444422 2 23355666666553333666654331 1 12222332 1111 11112346999
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
.||++|- +-|....||...|+|.|.+..|- .-+.+.+ .|+++ ...|++++.+.+.+.+.
T Consensus 248 ~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 248 YADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRKNLG 309 (335)
T ss_pred hcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHHhhh
Confidence 9999993 45678999999999999986542 2233333 47766 77899999886666554
|
They are found in archaea and some bacteria and have no known function. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=94.90 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=74.1
Q ss_pred HHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccccc----ccC-cceeEecccccccccC-CCCCHHHHHHH
Q 007300 470 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEG-FTGFQMGSFSVDCEAV-DPVDVAAVSTT 543 (609)
Q Consensus 470 ~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i----~~~-~~G~l~~~~~~~~~~v-~~~d~~~la~~ 543 (609)
++..+|.+.|+||.+|++|.+..|.--+|+|.|.|+..|+.-.. .+. ..|+-+ +|-+-. ..+++++|++-
T Consensus 496 eFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYI----vDRRfks~deSv~qL~~~ 571 (692)
T KOG3742|consen 496 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYI----VDRRFKSPDESVQQLASF 571 (692)
T ss_pred HHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEE----EecccCChhhHHHHHHHH
Confidence 57899999999999999999999999999999999998865444 332 345433 111111 23345667666
Q ss_pred HHHHHHhhCHHHHHHHHHHH----HHhhCCchHHHHHHHHHHHHHH
Q 007300 544 VRRALATYGTQALAEMMKNG----MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 544 I~~ll~~~~~~~~~~~~~~~----~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+...... .+++++.++. +..-++|+.+...|.+.=.-.+
T Consensus 572 m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 572 MYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 6665553 3444444332 4566899999988877554444
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.1e-05 Score=83.12 Aligned_cols=210 Identities=15% Similarity=0.054 Sum_probs=121.2
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.-+.||.|++..+...+.+.+ .|+ ++.++-|.+=.. ..+.. +
T Consensus 157 ~~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~-l~~~~--------------------~----- 198 (396)
T TIGR03492 157 RSRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDG-LEPPE--------------------R----- 198 (396)
T ss_pred hchhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhc-Ccccc--------------------c-----
Confidence 346799999999998988875 332 556666654211 11110 0
Q ss_pred HhCCCCCCCCcE-EEEEeccc--cccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCC-----------
Q 007300 391 EVGLPVDRNIPV-IGFIGRLE--EQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE----------- 455 (609)
Q Consensus 391 ~~gl~~~~~~~~-i~~iGrl~--~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~----------- 455 (609)
.+++. +.++ +++-|+-. ..+++..++++++.+.+ ++++|++.-.+.... +.+++.....+.
T Consensus 199 -~~l~~--~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~ 274 (396)
T TIGR03492 199 -KPLLT--GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTS 274 (396)
T ss_pred -cccCC--CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccch
Confidence 03332 2244 45555542 35678899999999964 578887653222112 223332222111
Q ss_pred -----ceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc---cccccC----cceeEec
Q 007300 456 -----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEEG----FTGFQMG 523 (609)
Q Consensus 456 -----~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~i~~~----~~G~l~~ 523 (609)
.+... .+ ..++..+|+.||++|.. .|.+..|++++|+|+|.....+.. .+.+.. ..++.
T Consensus 275 ~~~~~~~~v~-~~-~~~~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~-- 345 (396)
T TIGR03492 275 LFQKGTLEVL-LG-RGAFAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF-- 345 (396)
T ss_pred hhccCceEEE-ec-hHhHHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe--
Confidence 12222 22 23456799999999987 456779999999999998743321 122220 12222
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 524 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 524 ~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
+...+++.+++++.+++++ ++.+.+|.++ ..+.+.-...+++..+++.
T Consensus 346 --------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~~-~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 346 --------LASKNPEQAAQVVRQLLAD--PELLERCRRN-GQERMGPPGASARIAESIL 393 (396)
T ss_pred --------cCCCCHHHHHHHHHHHHcC--HHHHHHHHHH-HHHhcCCCCHHHHHHHHHH
Confidence 2567789999999999987 6666666532 2333443444455544443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-05 Score=84.13 Aligned_cols=119 Identities=19% Similarity=0.260 Sum_probs=80.4
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
...+++++|..... .++++++.+ ++.+++++|.... .....++. +..|..+....+++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~----------~~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAA----------DPRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCcc----------cccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 34688999987666 667888876 5788988876531 11134465 4566667777899999999
Q ss_pred EecCCCCCCcHH-HHHHHHcCCceEEcCCCCccc------ccccCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 479 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 479 v~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e------~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
|.- .|.. +.||+++|+|+|+-...+..| .+++.+.|..+ -...-+++.+.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 965 4554 999999999999988766444 23333444432 01234678888877653
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.5e-05 Score=84.13 Aligned_cols=123 Identities=20% Similarity=0.179 Sum_probs=79.5
Q ss_pred CcEEEEEecccc---ccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 400 IPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 400 ~~~i~~iGrl~~---~Kg~~~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.++++..|+... .+-...+++++..+ +.+++ .+|..... . ...++++......+. ..++..|
T Consensus 240 ~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~~ 305 (401)
T cd03784 240 PPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPRC 305 (401)
T ss_pred CcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhhh
Confidence 367778888753 34455666666655 55655 45544311 1 234456655444332 2479999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
|++|.- +-..++.||+++|+|+|+....+ ..+.+.+...|... +.. +.+++.++|+++++
T Consensus 306 d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 306 AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLLD 371 (401)
T ss_pred heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHhC
Confidence 999932 33478999999999999997654 34445555566643 333 78999999999998
Q ss_pred h
Q 007300 550 T 550 (609)
Q Consensus 550 ~ 550 (609)
+
T Consensus 372 ~ 372 (401)
T cd03784 372 P 372 (401)
T ss_pred H
Confidence 5
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-05 Score=82.70 Aligned_cols=194 Identities=14% Similarity=0.076 Sum_probs=120.9
Q ss_pred HHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 308 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
.....+.+|.+++.=|...+.+.+ .|. .++.|-|.+ |.-.+.+. ++
T Consensus 130 a~~i~~~~D~lLailPFE~~~y~k---~g~---------~~~yVGHpl~d~i~~~~~---------------------r~ 176 (381)
T COG0763 130 AVKIAKYVDHLLAILPFEPAFYDK---FGL---------PCTYVGHPLADEIPLLPD---------------------RE 176 (381)
T ss_pred HHHHHHHhhHeeeecCCCHHHHHh---cCC---------CeEEeCChhhhhcccccc---------------------HH
Confidence 344567899999999999999887 443 344554443 21112222 67
Q ss_pred HHHHHhCCCCCCCCcEEEEEec-ccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
..++++|++.+.. .+.+..|+ -.+ .+-...+++|+..+.. ++.+|++--... ..+.+.....+... ......
T Consensus 177 ~ar~~l~~~~~~~-~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~-~~~~~~ 252 (381)
T COG0763 177 AAREKLGIDADEK-TLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA--KYRRIIEEALKWEV-AGLSLI 252 (381)
T ss_pred HHHHHhCCCCCCC-eEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH--HHHHHHHHHhhccc-cCceEE
Confidence 7899999986653 34455554 333 5678888999999975 789999877654 32333333332221 112223
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-C----------------CcccccccCcceeEeccc
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-G----------------GLVDTVEEGFTGFQMGSF 525 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-g----------------g~~e~i~~~~~G~l~~~~ 525 (609)
......+..+..||+.+.. +|.+.+|+|.+|+|.|++-- . +++.++.+.. ++..+
T Consensus 253 ~~~~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~---ivPEl 324 (381)
T COG0763 253 LIDGEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGRE---IVPEL 324 (381)
T ss_pred ecCchHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCc---cchHH
Confidence 3445566789999998765 69999999999999988742 2 2222222211 00000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 526 SVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 526 ~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
.-+.-.++.+++++..++.+.
T Consensus 325 -----iq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 325 -----IQEDCTPENLARALEELLLNG 345 (381)
T ss_pred -----HhhhcCHHHHHHHHHHHhcCh
Confidence 002345789999999999884
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.7e-05 Score=83.56 Aligned_cols=272 Identities=14% Similarity=0.110 Sum_probs=148.2
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+|++.-|-.+.+..++.... .++| |.++|. |....+ ..+| ..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~Hiea----GlRs~d----------------~~~g-------~~ 111 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEA----GLRSGD----------------RTEG-------MP 111 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES---------S-----------------TTSS-------TT
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecC----CCCccc----------------cCCC-------Cc
Confidence 59999666676667766666554 5899 555563 211100 0001 11
Q ss_pred hHHHHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccch
Q 007300 305 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 382 (609)
Q Consensus 305 ~~~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 382 (609)
-...|..+ +.||.-++.++..++.+.+ .|.+++ +|.++-|- +|.-.... .
T Consensus 112 de~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~~-------------------~ 163 (346)
T PF02350_consen 112 DEINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQNK-------------------E 163 (346)
T ss_dssp HHHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHHH-------------------H
T ss_pred hhhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHhH-------------------H
Confidence 13344444 4699999999999999997 788766 77777552 33211100 0
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEecccc---ccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCce
Q 007300 383 LLKEAL-QAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 457 (609)
Q Consensus 383 ~~~~~~-~~~~gl~~~~~~~~i~~iGrl~~---~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 457 (609)
...+.+ ...+... ..+..+++..=|.+. ......+.++++.|.+ .++++++.....+...+.+.+...++ .++
T Consensus 164 ~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 000000 1111001 123344444434332 3456777788887766 58999998886666777777666666 478
Q ss_pred EEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCC
Q 007300 458 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 536 (609)
Q Consensus 458 ~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d 536 (609)
.............+++.|+++|-- .|.++-||..+|+|+|.-.. |--.+.+..+.+-+ + ..|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgd-----SsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGD-----SSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEES-----SHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEEc-----CccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 888888888888899999999844 45444499999999999954 55556666665544 4 489
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
.+++.++|.+++.+ ...+.++.. ....|.-...+++..++++
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhhC
Confidence 99999999999986 344444322 2345666666777766653
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.2e-05 Score=77.47 Aligned_cols=96 Identities=16% Similarity=0.183 Sum_probs=70.0
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEE-EEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.++++.|..++.+....+++++.++. .++++ +++|.+.+ ..+.++++....+ ++... -..+.+..+|+.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~--~~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF--IDVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE--eCHHHHHHHHHHCCEEE
Confidence 57899998888777788889988763 34444 36777654 3455666665544 45532 34456777999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 84 77999999999999998765
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.7e-06 Score=73.34 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=28.3
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||+|+... ..++.+++.+|.++||+|.++++..
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 788998752 2368899999999999999999963
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.0018 Score=67.46 Aligned_cols=224 Identities=17% Similarity=0.106 Sum_probs=142.3
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..||.-++.++..++.+.+ -|.+.+ +|.++-|-+ |.-.+.-. +..........
T Consensus 144 ~~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~ 197 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAK 197 (383)
T ss_pred HhhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHh
Confidence 3589999999999999997 677655 788887754 21111100 00001111222
Q ss_pred -hCCCCCCCCcEEEEEecccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHH
Q 007300 392 -VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 467 (609)
Q Consensus 392 -~gl~~~~~~~~i~~iGrl~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 467 (609)
++.. .++.+++..=|-+. .+++..+++++.++.+ ++++++.--...+..++ +.........++..+..+....
T Consensus 198 ~~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e-~~~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 198 GLDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRE-LVLKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred hhccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhH-HHHHHhCCCCcEEEeCCcchHH
Confidence 2222 22355566666553 3899999999998876 46666654433322222 2222222223588777888888
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC-cccccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
.+.++..|-+++- ..|..+=||-..|+||++-..+. -+|.+..| +-.+ -..|.+.+.+.+..
T Consensus 275 f~~L~~~a~~ilt-----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~l-----------vg~~~~~i~~~~~~ 337 (383)
T COG0381 275 FHNLMKNAFLILT-----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNIL-----------VGTDEENILDAATE 337 (383)
T ss_pred HHHHHHhceEEEe-----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEE-----------eCccHHHHHHHHHH
Confidence 8888999966653 36778999999999999987544 45555543 4444 34677999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++++ .+.+++|+.. ...|.--...++..+++++-..
T Consensus 338 ll~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 338 LLED--EEFYERMSNA--KNPYGDGNASERIVEILLNYFD 373 (383)
T ss_pred HhhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHhh
Confidence 9998 6777777653 4566666677777777765543
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00098 Score=70.39 Aligned_cols=192 Identities=19% Similarity=0.181 Sum_probs=117.6
Q ss_pred HHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHH
Q 007300 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 387 (609)
Q Consensus 308 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (609)
.+..-+.+|.+++.=|...+.+.+ .|+ +++.+-|.. .+...+..+ +..
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl-~d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPL-LDEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcc-hhhhccCCC-------------------HHH
Confidence 344556789999999999999887 443 455555543 111111111 344
Q ss_pred HHHHhCCCCCCCCcE-EEEEec-ccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee
Q 007300 388 LQAEVGLPVDRNIPV-IGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 388 ~~~~~gl~~~~~~~~-i~~iGr-l~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.++.+ ++.+ .++ .+..|+ -.+ .+.+..+++++.++.+ +++++++..... ...+.+.+.....+..+....
T Consensus 175 ~~~~~-l~~~--~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~- 249 (373)
T PF02684_consen 175 AREKL-LDPD--KPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVI- 249 (373)
T ss_pred HHHhc-CCCC--CcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEE-
Confidence 45555 5543 354 455554 334 4566889999999876 689998876544 344445555544443333222
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-C----------------CcccccccCcceeEeccc
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-G----------------GLVDTVEEGFTGFQMGSF 525 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-g----------------g~~e~i~~~~~G~l~~~~ 525 (609)
........++.||+.+.. .|.+.+|++.+|+|.|+.-- + |++.++.+.. ++..+
T Consensus 250 -~~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~---v~PEl 320 (373)
T PF02684_consen 250 -IEGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE---VVPEL 320 (373)
T ss_pred -cCCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC---cchhh
Confidence 223344689999998876 58999999999999988743 2 2222222211 00000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHh
Q 007300 526 SVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 526 ~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+-+..+++.+++.+..++.+
T Consensus 321 -----iQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 -----IQEDATPENIAAELLELLEN 340 (373)
T ss_pred -----hcccCCHHHHHHHHHHHhcC
Confidence 12456889999999999987
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0015 Score=68.56 Aligned_cols=211 Identities=17% Similarity=0.100 Sum_probs=133.2
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
-.+.+..++..|.|+..|+..++++.+ .|.. ++.+.-| +....... ......
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 355677889999999999999999998 6654 3333332 22211111 112334
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.+.+|..++.+ .++++..+.. ...-+.++++++.+++ +|..++++=-.+ +-.+.++++..+.+-.+..+-.
T Consensus 220 ~~~~r~~l~~~----r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~~llIlVPRHp-ERf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 220 LAALRRQLGGH----RPVWVAASTH--EGEEEIILDAHQALKKQFPNLLLILVPRHP-ERFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHHhcCCC----CceEEEecCC--CchHHHHHHHHHHHHhhCCCceEEEecCCh-hhHHHHHHHHHHcCCeEEeecC
Confidence 56777877743 4678777772 3334568999998877 577777765544 4555666666655432221111
Q ss_pred c-------------ChHHHHHHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCC-CCcccc---cccCcceeEecc
Q 007300 463 F-------------NIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST-GGLVDT---VEEGFTGFQMGS 524 (609)
Q Consensus 463 ~-------------~~~~~~~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~-gg~~e~---i~~~~~G~l~~~ 524 (609)
- .--++..+|..||+.++--.+ +--|--++|+.++|+|||.-.. --..|+ +...+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 1 112344689999998776444 4456679999999999998753 233333 3344556654
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007300 525 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 564 (609)
Q Consensus 525 ~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 564 (609)
.|.+.+++.+..++.+ .+.+.+|++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5577888888888776 666677766653
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00096 Score=73.69 Aligned_cols=154 Identities=15% Similarity=0.141 Sum_probs=97.4
Q ss_pred HHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 308 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 308 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
.+..-+.+|.+++.=|...+.+.+ .|+ +++.+-|.. |. ..+.. .++
T Consensus 355 ikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~ 401 (608)
T PRK01021 355 KTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNL 401 (608)
T ss_pred HHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHH
Confidence 344566789999999999999886 443 455555543 22 11111 155
Q ss_pred HHHHHhCCCCCCCCcEEEEEec-ccc-ccCHHHHHHHHh--hcccCCeEEEEEeCCChhhHHHHHHHHHhCC-CceEEEe
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVA 461 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~~~ll~a~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~ 461 (609)
+.++++|++.+. ..+.+..|+ -.+ .+....+++|++ .+.+ +.++++..... ...+.++++....+ ..+...
T Consensus 402 ~~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~ii- 477 (608)
T PRK01021 402 SWKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-THQLLVSSANP-KYDHLILEVLQQEGCLHSHIV- 477 (608)
T ss_pred HHHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-CeEEEEecCch-hhHHHHHHHHhhcCCCCeEEe-
Confidence 678889986443 234455664 334 567888999998 5543 68887754332 24455555544322 112221
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
......+++++||+.+.. +|.+.+|++.+|+|.|+.-
T Consensus 478 --~~~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 478 --PSQFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTC 514 (608)
T ss_pred --cCcchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEE
Confidence 122235799999999976 5899999999999998864
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0029 Score=70.10 Aligned_cols=153 Identities=12% Similarity=0.016 Sum_probs=91.3
Q ss_pred cEEEEEecccc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--H
Q 007300 401 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 473 (609)
Q Consensus 401 ~~i~~iGrl~~-----~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~ 473 (609)
.+++..|.... .+-...+++|+.++ +.++++..++.. . . ...+.++.....++.. .++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~---~lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQR---AVLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHH---HHhcCC
Confidence 67777888642 33456677777766 457776654431 1 1 2345667665555544 367 4
Q ss_pred hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCC--CCHHHHHHHHHHH
Q 007300 474 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRA 547 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~--~d~~~la~~I~~l 547 (609)
.++++|. -|=..++.||+.+|+|+|+-...+ ....+++.+.|... +. -+.+++.++|.++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l----------~~~~~t~~~l~~ai~~v 429 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL----------DTVTVSAAQLVLAIVDV 429 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe----------ccCCcCHHHHHHHHHHH
Confidence 5777773 233457999999999999987543 44444455667654 33 3678999999999
Q ss_pred HHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHH
Q 007300 548 LATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 548 l~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~ 581 (609)
++++. .+..+++++....+..+-..-+-.|.+..
T Consensus 430 l~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v 464 (507)
T PHA03392 430 IENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHV 464 (507)
T ss_pred hCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 98732 12333333333334444545555555443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00052 Score=73.95 Aligned_cols=184 Identities=15% Similarity=0.043 Sum_probs=103.5
Q ss_pred HHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC---CceEEEee
Q 007300 388 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAK 462 (609)
Q Consensus 388 ~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~ 462 (609)
.|+.+|||.+. .+++...+ ..|=.+..++++.++.+ |+.+|++...+. ..++.+++...+.+ +++.+...
T Consensus 275 ~R~~~gLp~d~--vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLPEDA--VVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp ETGGGT--SSS--EEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CHHHcCCCCCc--eEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCC
Confidence 37889999654 55555554 47777788888887766 899998876543 23455666555554 46776554
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHH
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 542 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~ 542 (609)
-+.++.-..+..+|+++=|..+ +-+.+.+||+.+|+|||+-....+..=+.- +++- ...|.-.-..|.+++.+
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~a---SiL~---~lGl~ElIA~s~~eYv~ 422 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGA---SILR---ALGLPELIADSEEEYVE 422 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHH---HHHH---HHT-GGGB-SSHHHHHH
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHH---HHHH---HcCCchhcCCCHHHHHH
Confidence 4444444578999999987432 346889999999999998764333221110 0000 00011113467899999
Q ss_pred HHHHHHHhhCHHHHHHHHH---HHHH--hhCCchHHHHHHHHHHHHHH
Q 007300 543 TVRRALATYGTQALAEMMK---NGMA--QDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 543 ~I~~ll~~~~~~~~~~~~~---~~~~--~~fs~~~~a~~~~~~~~~l~ 585 (609)
.-.++..+ .+.++++.+ +.+. .-|+-+..++++++.|++++
T Consensus 423 ~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 423 IAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 99898887 444443332 2332 34899999999999999874
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0015 Score=68.14 Aligned_cols=118 Identities=14% Similarity=0.175 Sum_probs=71.8
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.+++|.|. .+...+++++.++ +++++++ |.... .. . .++.++... .|..+.+..+|..||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~---~----~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK---N----SYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc---c----ccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35566544 3456777777666 3555544 43221 11 1 223456554 4555567789999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCccc------ccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
-+-+ .++.||+++|+|+|.....+..| .+.+...|... +..+. ++.+++...+.
T Consensus 254 ~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 254 HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRN 313 (321)
T ss_pred CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhccc
Confidence 6532 36999999999999988766444 34455667654 66665 44444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0024 Score=64.08 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=108.4
Q ss_pred HHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 309 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 309 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
+..+..||.+++++......+.. +|-.+.++..-..+..+.| ...|.|. .++
T Consensus 121 kl~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~ev 172 (346)
T COG1817 121 KLTLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEV 172 (346)
T ss_pred hcchhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHH
Confidence 44577899999999988888775 6766654333233333333 2224443 356
Q ss_pred HHHhCCCCCCCCcEEEEE---ec--cccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec
Q 007300 389 QAEVGLPVDRNIPVIGFI---GR--LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~i---Gr--l~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
-+++|+..+. ..+++=. |. ...+++.+.+.++++.|.+.. .|++-. .+...+.++..... +. ..
T Consensus 173 lkeLgl~~~~-~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr-~~~~~eife~~~n~----i~--pk- 241 (346)
T COG1817 173 LKELGLEEGE-TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR-EKEQAEIFEGYRNI----II--PK- 241 (346)
T ss_pred HHHcCCCCCC-ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC-chhHHHHHhhhccc----cC--Cc-
Confidence 7889987652 2232211 11 234678888889999886544 444432 22233333332211 10 11
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC---CcccccccCcceeEecccccccccCCCCCHHHH
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
..-+.-+++-.|++++ -+-|.-.-||...|+|.|++.-| +.-+... ..|.++ ...|+.+.
T Consensus 242 ~~vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~----------~s~~~~~~ 304 (346)
T COG1817 242 KAVDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY----------HSTDEIAI 304 (346)
T ss_pred ccccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee----------ecCCHHHH
Confidence 1111113677788877 34567789999999999999854 2223333 357766 66777777
Q ss_pred HHHHHHHHHh
Q 007300 541 STTVRRALAT 550 (609)
Q Consensus 541 a~~I~~ll~~ 550 (609)
.+.+.+.+.+
T Consensus 305 ~~~a~~~l~~ 314 (346)
T COG1817 305 VEYAVRNLKY 314 (346)
T ss_pred HHHHHHHhhc
Confidence 7777777765
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.002 Score=69.45 Aligned_cols=126 Identities=17% Similarity=0.199 Sum_probs=82.9
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
++.+..|..... .+++-.++..+.+.+.++++...+.+ ......+.++.....++.. .++..||++|.
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~---~~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQL---ELLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHH---HHhhhcCEEEe
Confidence 455666666544 44444444445445888888764421 1112345556554444444 37999999996
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.. =-.++.||+.+|+|+|+-..+. ..+-+++-..|... -.+....+.++++|++++++
T Consensus 307 hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~ 368 (406)
T COG1819 307 HG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLAD 368 (406)
T ss_pred cC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcC
Confidence 54 2346889999999999876553 44556667788765 23468899999999999997
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0093 Score=60.37 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=111.3
Q ss_pred cEEEEEeccc-cccCHHHHHHHHhhcccCCeEEEE-EeC--CChhhHHHHHHHHHhC-C-CceEEEeec-ChHHHHHHHH
Q 007300 401 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 473 (609)
Q Consensus 401 ~~i~~iGrl~-~~Kg~~~ll~a~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~~l~ 473 (609)
++.+.+|+-. +..++..+++++++....++++++ +|- |.+.|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 4666677754 778899999999988778999887 455 6788989998888874 4 467666555 5556667999
Q ss_pred hCcEEEecCC-CCCCcHHHHHHHHcCCceEEcC-CCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 474 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 474 ~aDv~v~pS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
.||+.++--. .++.|+.++ .+..|+||+-+. +.-..++.+.+..- +| + -+.-|...+.++=
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv~V-lf---~-----~d~L~~~~v~e~~------- 288 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGLPV-LF---T-----GDDLDEDIVREAQ------- 288 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCCeE-Ee---c-----CCcccHHHHHHHH-------
Confidence 9999998865 489998877 799999998885 55566666555443 23 0 0222222222211
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 552 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 552 ~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
.++...-++.+. |+-+...+.|.++|..+.
T Consensus 289 --rql~~~dk~~I~--Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 289 --RQLASVDKNIIA--FFSPNYLQGWRNALAIAA 318 (322)
T ss_pred --HHHHhhCcceee--ecCHhHHHHHHHHHHHhh
Confidence 111222222233 999999999999998764
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0047 Score=66.81 Aligned_cols=183 Identities=15% Similarity=0.068 Sum_probs=110.3
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHhCC---CceEEEee
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 462 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 462 (609)
|.++|+|.+. .++++.+ ...|-...+++..-++.+ |+-.|++.|.|+ +...+.+++++.+.+ .++++..+
T Consensus 421 R~~lglp~~a--vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPEDA--VVFCCFN--NYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCCe--EEEEecC--CcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 6788998654 3333333 456654555555444444 788888888765 568889999998876 46777777
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc-----ccccc-CcceeEecccccccccCCCCC
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-----DTVEE-GFTGFQMGSFSVDCEAVDPVD 536 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-----e~i~~-~~~G~l~~~~~~~~~~v~~~d 536 (609)
-+.+....-|.-||+++=+.-+ +-..+.+||+.+|+|||+-..--+. .++.. |..-++ . .+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v-----------A-~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV-----------A-DS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh-----------c-CC
Confidence 7777777789999999966543 3356799999999999875421100 01111 111111 1 33
Q ss_pred HHHHHHHHHHHHHhhC-HHHHHHHHHHHHH--hhCCchHHHHHHHHHHHHHHHcC
Q 007300 537 VAAVSTTVRRALATYG-TQALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~-~~~~~~~~~~~~~--~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
.+++.+.-.++-.+.. ..+.+..-++.+. .-|+.+..+++++.+|.++....
T Consensus 564 ~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~y 618 (620)
T COG3914 564 RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSEY 618 (620)
T ss_pred HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHhh
Confidence 3444443333333310 1111111111122 25889999999999999998754
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00032 Score=74.67 Aligned_cols=185 Identities=15% Similarity=0.220 Sum_probs=89.5
Q ss_pred ceEEEEEeec---------CCccccchHHHHhhchhHHHHhC--------CC----eEEEEeecCCCccccCCCceEEEE
Q 007300 85 LNILFVGTEV---------APWSKTGGLGDVLGGLPPALAAN--------GH----RVMTIAPRYDQYKDAWDTDVVIEL 143 (609)
Q Consensus 85 MkIl~vs~~~---------~P~~~~GG~~~~~~~La~aL~~~--------Gh----~V~vit~~~~~~~~~~~~~~~~~~ 143 (609)
-+|++++..- .|+ +||.-.++.+++++|.+. |. +|.++|..-+... ........+.
T Consensus 273 f~vvliSpHG~f~q~nvLG~pD--TGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~le~ 349 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPD--TGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQRLEK 349 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTT--SSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSSEEE
T ss_pred EEEEEEcCccccccccccCCCC--CCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCccccccc
Confidence 3899999741 255 999999999999999763 44 4778875533211 1111223322
Q ss_pred EeCCEEeeEEEEEeeEcCeeEEEEeCcchhhh--hcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHH-hhhhhccCCCC
Q 007300 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK--VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALE-APRILNLNSNK 220 (609)
Q Consensus 144 ~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~ 220 (609)
..+ .++.++.+.+.++-+- .+ +.|+.| +| +| ..+ |...+.+ +...+
T Consensus 350 ~~g--t~~a~IlRvPF~~~~g-i~--~kwisrf~lW------Py-----------Le~---fa~d~~~~i~~e~------ 398 (550)
T PF00862_consen 350 VSG--TENARILRVPFGPEKG-IL--RKWISRFDLW------PY-----------LEE---FADDAEREILAEL------ 398 (550)
T ss_dssp ETT--ESSEEEEEE-ESESTE-EE---S---GGG-G------GG-----------HHH---HHHHHHHHHHHHH------
T ss_pred cCC--CCCcEEEEecCCCCcc-hh--hhccchhhch------hh-----------HHH---HHHHHHHHHHHHh------
Confidence 222 2333433332221110 00 112222 22 11 122 2233332 22333
Q ss_pred CCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCc
Q 007300 221 YFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPV 300 (609)
Q Consensus 221 ~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (609)
.++||+| |.|.....+++.++... .++|.+++-|...-+ .+..++..+-.+...+. |
T Consensus 399 --~~~PdlI-~GnYsDgnlvA~LLs~~-------lgv~~~~iaHsLek~-Ky~~s~~~w~e~e~~Yh----f-------- 455 (550)
T PF00862_consen 399 --QGKPDLI-IGNYSDGNLVASLLSRK-------LGVTQCFIAHSLEKT-KYEDSDLYWKEIEEKYH----F-------- 455 (550)
T ss_dssp --TS--SEE-EEEHHHHHHHHHHHHHH-------HT-EEEEE-SS-HHH-HHHTTTTTSHHHHHHH-----H--------
T ss_pred --CCCCcEE-EeccCcchHHHHHHHhh-------cCCceehhhhccccc-cccccCCCHHHHHhhcc----c--------
Confidence 2369999 99988888888888877 599999999986431 11111111111111111 0
Q ss_pred CCchhHHHHHHhhcCCEEEeeCHHHHH
Q 007300 301 RGRKINWMKAGILESDMVLTVSPHYAQ 327 (609)
Q Consensus 301 ~~~~~~~~k~~~~~ad~vi~vS~~~~~ 327 (609)
...+......++.||.|||.+.....
T Consensus 456 -s~qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 456 -SCQFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp -HHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred -hhhhhHHHHHhhcCCEEEEcchHhhc
Confidence 12344556678899999998765444
|
4.1.13 from EC in the following reaction: |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.036 Score=57.42 Aligned_cols=187 Identities=12% Similarity=0.066 Sum_probs=121.3
Q ss_pred CeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcc
Q 007300 347 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 426 (609)
Q Consensus 347 ~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~ 426 (609)
++..++.++|.+.|.|.+.. ..-.--+.++|+-.+. .++.++++.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~d------------------------------a~~~~dL~~ign~~pD-----r~e~~ke~~ 206 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPD------------------------------ASYDVDLNLIGNPYPD-----RVEEIKEFF 206 (373)
T ss_pred ceeccCccCCchhcccCCcc------------------------------ccceeeeEEecCCCcc-----HHHHHHHHh
Confidence 78889999999998876521 0011257888876654 444444442
Q ss_pred c-C------CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecCh-HHHHHHHHhCcEEEecCCC---CC---CcHHHH
Q 007300 427 K-E------NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRF---EP---CGLIQL 492 (609)
Q Consensus 427 ~-~------~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~-~~~~~~l~~aDv~v~pS~~---E~---~gl~~l 492 (609)
- + +-++.+.|..- -....... ...++...+.++. ...+..++.-|+.+.-++. ++ +.+-+.
T Consensus 207 ~~ps~kl~v~rr~~~~g~~y--~~~~~~~~---~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 207 VEPSFKLMVDRRFYVLGPRY--PDDIWGRT---WEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred hccchhhhccceeeecCCcc--chhhhccc---ccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 2 1 34566667651 01111110 1112223333333 4455567777777665543 22 367899
Q ss_pred HHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhCCch
Q 007300 493 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 571 (609)
Q Consensus 493 EAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~ 571 (609)
|+++||.+.|++..-++.-++.+|..-.+ ..|..++.+.++.++...+ +.++.+.+...+...++.+
T Consensus 282 eiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 282 EIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred HHhhcCCccccccHHHHHHhcCCchheEE------------ecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHH
Confidence 99999999999998888889999877664 4899999999999999843 2455555666667779999
Q ss_pred HHHHHHHHHHHHHH
Q 007300 572 GPAKKWEETLLNLE 585 (609)
Q Consensus 572 ~~a~~~~~~~~~l~ 585 (609)
.-+.++.+....+.
T Consensus 350 ~r~~~~~~~i~sI~ 363 (373)
T COG4641 350 ERIFKLLNEIASIN 363 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 98888887777644
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.069 Score=52.49 Aligned_cols=114 Identities=14% Similarity=0.072 Sum_probs=60.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCH--HHHHHHHhhccc----CCeEEEEEeCCC--hhhHHHHHHHHHhCCCc
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGK--KPMEKQLEQLEILYPEK 456 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~--~~ll~a~~~l~~----~~~~lvivG~g~--~~~~~~l~~l~~~~~~~ 456 (609)
+++++....++ ...+-+++|.-.+.-.. |.+.+.+..+.+ ....|++--.-. +.....++.-....+
T Consensus 150 ~e~~~~~~p~~---rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~-- 224 (329)
T COG3660 150 REAFKHLLPLP---RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSP-- 224 (329)
T ss_pred HHHHHhhCCCC---CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCc--
Confidence 45555444433 44688999986654433 333333333322 467777765432 223333322111111
Q ss_pred eEEEeec--ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 457 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 457 v~~~~~~--~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
..+...- ..+-...+++.||.++.+... =.-.-||.+.|+||-+---
T Consensus 225 ~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 225 GIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred eeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 1111111 111233599999999988653 2236799999999976543
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.008 Score=64.53 Aligned_cols=157 Identities=14% Similarity=0.134 Sum_probs=86.0
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.+++..|++...+. +.+-+++..+.+.++++++ +|.+.+ ...+. ..+.++......+.. .+++.||++|
T Consensus 227 ~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~~---~ll~~~~~~I 296 (392)
T TIGR01426 227 VVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQL---EILKKADAFI 296 (392)
T ss_pred EEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCHH---HHHhhCCEEE
Confidence 46677788643221 2222233333334566554 555431 11222 234556554333432 5899999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH-H
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 554 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~-~ 554 (609)
..+- ..+++||+++|+|.|+....+ ..+.+.+...|..+. -+.-+.++++++|++++.+... +
T Consensus 297 ~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~~~~ 364 (392)
T TIGR01426 297 THGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPRYAE 364 (392)
T ss_pred ECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHHHHH
Confidence 6542 247899999999999976544 233344545666540 0233578999999999987321 2
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHH
Q 007300 555 ALAEMMKNGMAQDLSWKGPAKKWEET 580 (609)
Q Consensus 555 ~~~~~~~~~~~~~fs~~~~a~~~~~~ 580 (609)
..+++.+. +.+.-.-+..++.++++
T Consensus 365 ~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 365 RLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 22223222 23334455555555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.17 Score=52.23 Aligned_cols=164 Identities=15% Similarity=0.147 Sum_probs=107.8
Q ss_pred cEEEEEecc-ccccCHHHHHHHHhhcccCCeEEEE-EeCC--ChhhHHHHHHHHHhC-C-CceEEEeec-ChHHHHHHHH
Q 007300 401 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 473 (609)
Q Consensus 401 ~~i~~iGrl-~~~Kg~~~ll~a~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~~l~ 473 (609)
+.-+.+|+- ++..+...+++++++....++++++ +|-| .+.|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 455566665 4777888899988886667888776 4554 467888888888874 4 356555444 6666778999
Q ss_pred hCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 474 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 474 ~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
.||+.++.... .+.|+.++ .+.+|+||+-+........+.+..--+++ .-|.-|...+.++=+++... +
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~-d 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANV-D 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhC-c
Confidence 99999999865 89999877 89999999999876666555554333444 11333444444433333321 0
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l 584 (609)
. + .-.|.-....+.|.+.+..+
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHHH
Confidence 1 1 12266667777777776543
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.15 Score=53.59 Aligned_cols=90 Identities=19% Similarity=0.112 Sum_probs=58.0
Q ss_pred EEEEEeccc-c-ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 402 VIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 402 ~i~~iGrl~-~-~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
+.++-|+=. + .+-+..+++++.++.+...++++.|... . +.+++...+.. .+.+. + ....+++.||+.+
T Consensus 170 I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDlal 240 (347)
T PRK14089 170 IAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFAF 240 (347)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHHH
Confidence 445555432 2 3456667799988876557788887654 2 44444333322 12222 1 3356899999988
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
.. .|.+.+|++.+|+|.|+.-
T Consensus 241 ~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 241 IC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred hc-----CcHHHHHHHHhCCCEEEEE
Confidence 65 5888889999999998864
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0022 Score=59.93 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=31.0
Q ss_pred HHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCc
Q 007300 310 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 360 (609)
Q Consensus 310 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~ 360 (609)
..+..||..+++|.+.++.+-.. + ..+|.||+-|||++.+
T Consensus 131 ~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 131 LALEQADAGISPTRWQRSQFPAE----------F-RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcEEeecccchhhc
Confidence 35668999999999998876541 1 1399999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.8 Score=49.63 Aligned_cols=215 Identities=13% Similarity=0.125 Sum_probs=112.0
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCC-CCccccccccCcchhcccchHH
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNP-LTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p-~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
.+.+..++.+|.|.+=-+.-.+.+.+ .|++.. ++.+.+ |+.+.-+ ...+. ..
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~~~---------------~~ 220 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTEDF---------------TA 220 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccccc---------------cc
Confidence 45677889999987777777777765 666533 444433 4433211 11000 00
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEec-ccc---------ccCHHHHHHHHhhcccCCeEEEEEeCC------ChhhHHHHHH
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGR-LEE---------QKGSDILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQ 448 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGr-l~~---------~Kg~~~ll~a~~~l~~~~~~lvivG~g------~~~~~~~l~~ 448 (609)
...+....+.+. ..++|++.-| +.+ +.-...+.+++..+.+.+.+++++-.- .+......++
T Consensus 221 ~~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~ 298 (426)
T PRK10017 221 SYAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALN 298 (426)
T ss_pred chhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHH
Confidence 001111112211 2356655544 321 111245667777776667666655431 1112222344
Q ss_pred HHHhCCC--ceEE-EeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC-ccccccc-CcceeEec
Q 007300 449 LEILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMG 523 (609)
Q Consensus 449 l~~~~~~--~v~~-~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~i~~-~~~G~l~~ 523 (609)
+....+. ++.. ...++..++..+++.||+++-.-. -..+=|++.|+|+|+-.... ...++.+ |...+..
T Consensus 299 l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~- 372 (426)
T PRK10017 299 LRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI- 372 (426)
T ss_pred HHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe-
Confidence 4444332 2222 233566666689999999875432 13555899999999987532 2222221 1111221
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007300 524 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 564 (609)
Q Consensus 524 ~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 564 (609)
.++.-+.+++.+.+.+++++ .+.+++..++++
T Consensus 373 -------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 373 -------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred -------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 22555678999999999998 555554444443
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.04 Score=58.62 Aligned_cols=193 Identities=15% Similarity=0.158 Sum_probs=96.7
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
.........|.+++.|+...+.+.+. ++.+.+ .++..|. |..|. +.......++
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~------PR~D~----------l~~~~~~~~~ 180 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKKA--FGYPED--------KILVTGY------PRNDY----------LFNKSKENRN 180 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHHH--TT--GG--------GEEES--------GGGHH----------HHHSTT-HHH
T ss_pred hhhhhccCCcEEEECCHHHHHHHHHH--hccCcc--------eEEEeCC------CeEhH----------HhccCHHHHH
Confidence 44556778999999999999988863 555543 3455564 22111 0111122256
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCH------H--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceE
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS------D--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 458 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~------~--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~ 458 (609)
.+++.++++. ++.+|+|+=.+...... . .-++.+..+.+.++.+++-.-. ......... .....++.
T Consensus 181 ~i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~ 255 (369)
T PF04464_consen 181 RIKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNII 255 (369)
T ss_dssp HHHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEE
T ss_pred HHHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEE
Confidence 7788888764 44799998665433222 1 1223333444468877776532 233333222 22233454
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc--CC-------CCcccccccCcceeEeccccccc
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--ST-------GGLVDTVEEGFTGFQMGSFSVDC 529 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s--~~-------gg~~e~i~~~~~G~l~~~~~~~~ 529 (609)
... +...+..++..||++|-= ++-+++|++.+++|||-- +. |...+ ..+..-|-.
T Consensus 256 ~~~--~~~~~~~ll~~aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~-------- 319 (369)
T PF04464_consen 256 FVS--DNEDIYDLLAAADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPI-------- 319 (369)
T ss_dssp E-T--T-S-HHHHHHT-SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-E--------
T ss_pred ECC--CCCCHHHHHHhcCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCce--------
Confidence 332 223566799999999843 566899999999999954 32 11112 112222332
Q ss_pred ccCCCCCHHHHHHHHHHHHHh
Q 007300 530 EAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 530 ~~v~~~d~~~la~~I~~ll~~ 550 (609)
..+.++|.++|+.++++
T Consensus 320 ----~~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 320 ----VYNFEELIEAIENIIEN 336 (369)
T ss_dssp ----ESSHHHHHHHHTTHHHH
T ss_pred ----eCCHHHHHHHHHhhhhC
Confidence 36889999999998876
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.19 Score=57.60 Aligned_cols=264 Identities=19% Similarity=0.226 Sum_probs=164.0
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||++..++|-+++... ..+++.+..|...+ ... .+ ..+ ...
T Consensus 141 ~d~v-wihdyhlmllp~~lr~~~------~~~~ig~flhspfp-----ssE--------i~-r~l------------p~r 187 (732)
T KOG1050|consen 141 GDIV-WIHDYHLMLLPQMLRERF------NSAKIGFFLHSPFP-----SSE--------IY-RCL------------PVR 187 (732)
T ss_pred CCcE-EEEcchhhccchhhhccc------ccceEEEeccCCCC-----hHH--------HH-Hhc------------ccH
Confidence 5888 999999999998888754 57788788885332 110 00 000 011
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccch-----h----hhccCCeeEecCCCCCCCcCCCCccccccccCc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD-----N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 374 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~-----~----~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~ 374 (609)
.-+-.++..+|.+-+.+..++..+.+..- .+.+.. . .-+...+..+|-|+|...+......
T Consensus 188 ~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-------- 259 (732)
T KOG1050|consen 188 KEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-------- 259 (732)
T ss_pred HHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc--------
Confidence 22233566777777777777766554211 111111 0 0122356677888888776433210
Q ss_pred chhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc------CCeEEEEEeCCC----h---h
Q 007300 375 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---P 441 (609)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~------~~~~lvivG~g~----~---~ 441 (609)
.....-..+++..+ .++.+|+-+-|+...||...=+.++.++.. ..+.++.+..+. + +
T Consensus 260 ----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~ 330 (732)
T KOG1050|consen 260 ----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEE 330 (732)
T ss_pred ----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHH
Confidence 00011122333333 256789999999999999887888887765 245555444332 1 2
Q ss_pred hHHHHHHHHHh----CCC----ceE-EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcC----CceEEcCCCC
Q 007300 442 MEKQLEQLEIL----YPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTGG 508 (609)
Q Consensus 442 ~~~~l~~l~~~----~~~----~v~-~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G----~PvI~s~~gg 508 (609)
++..+..+..+ ++. .+. ..-.++..++-+++..+|+.++.+..+|..++.+|+..|. .+.|.+..-|
T Consensus 331 ~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G 410 (732)
T KOG1050|consen 331 LKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIG 410 (732)
T ss_pred HHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeecc
Confidence 33333333332 221 122 2223466777789999999999999999999999998873 6778888888
Q ss_pred cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 509 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 509 ~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
..+..+++.-. +.|-|.++++..|..++..+
T Consensus 411 ~~~tl~d~aiv------------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 411 DDTTLEDAAIV------------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred ccccccccCEE------------ECCcchHHHHHHHHHHhhcC
Confidence 88887665432 38999999999999999974
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.44 Score=49.39 Aligned_cols=104 Identities=16% Similarity=0.060 Sum_probs=67.8
Q ss_pred cEEEEEecccccc--CHH---HHHHHHhhccc-CCeEEEEEeCC--ChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 401 PVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 401 ~~i~~iGrl~~~K--g~~---~ll~a~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
.+.+.+|.-.... +.+ .+++.+..+.+ .+..+.|...- +++.++.+.++....+ .+.++..-..+-...+|
T Consensus 148 ~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~L 226 (311)
T PF06258_consen 148 RVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENPYLGFL 226 (311)
T ss_pred eEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCcHHHHH
Confidence 4667888644322 334 56666666655 46788888774 3567777777765444 24333222222244699
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 508 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 508 (609)
+.||.++++.. .-.-+.||.+.|+||.+-...+
T Consensus 227 a~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 227 AAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 99999999865 3334899999999998888766
|
The function of this family is unknown. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.38 E-value=4.1 Score=42.28 Aligned_cols=136 Identities=14% Similarity=0.202 Sum_probs=74.2
Q ss_pred CcEEEEEeccccccCHHHH---HHHHhhccc-CCeEEEEEeCCC-hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh
Q 007300 400 IPVIGFIGRLEEQKGSDIL---AAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~l---l~a~~~l~~-~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 474 (609)
..+++.+|.- .-|-+.+ ++|...+.. ...-++|.|.-- ..-.+++...+.+.+ ++.. ..|..+ +..++++
T Consensus 220 ~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~I-~~f~~~-~~~ll~g 294 (400)
T COG4671 220 FDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HISI-FEFRND-FESLLAG 294 (400)
T ss_pred ceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeEE-EEhhhh-HHHHHHh
Confidence 3577777753 4454444 444444322 122355666643 334445555554444 3443 345444 3459999
Q ss_pred CcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccc--cccc---CcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD--TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 475 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e--~i~~---~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
|+..|.-+-+ ++..|-++.|+|.+.-....-.+ ++.- .+-|+. |.-.-+.-.++.|+++|..+++
T Consensus 295 A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhccc
Confidence 9999865432 56889999999987665432222 2221 112321 0001133457889999998887
Q ss_pred h
Q 007300 550 T 550 (609)
Q Consensus 550 ~ 550 (609)
.
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 4
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.34 E-value=1.4 Score=44.15 Aligned_cols=88 Identities=16% Similarity=0.279 Sum_probs=58.3
Q ss_pred EEEEEeccccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+++..|.- ..|| +..+.+..|.+.++.+. ++|.+.+.+.+..+... +++. +..+ .+.+.+..++..||+.+.
T Consensus 161 ilI~lGGs-Dpk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~-~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGS-DPKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAE-KYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCC-Chhh--hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHh-hCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 66677764 4454 56677777766555554 45666655555555444 4442 4332 356667789999999986
Q ss_pred cCCCCCCcHHHHHHHHcCCce
Q 007300 481 PSRFEPCGLIQLHAMRYGTVP 501 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~Pv 501 (609)
. -|.++.||...|+|.
T Consensus 234 A-----aGstlyEa~~lgvP~ 249 (318)
T COG3980 234 A-----AGSTLYEALLLGVPS 249 (318)
T ss_pred c-----cchHHHHHHHhcCCc
Confidence 4 688999999999994
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.93 Score=49.57 Aligned_cols=128 Identities=11% Similarity=0.070 Sum_probs=76.3
Q ss_pred cEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEE-EeCCCh-hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 401 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 401 ~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.+++..|.+. ..+-+..++.++.++ +.+|++ +..+.. .+.+ ....+.++++....+.+.. .+|+..
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~---~~~~~~~~~~~v~~w~PQ~---~iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPP---GYVERVSKQGKVVSWAPQL---EVLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCH---HHHHHhccCEEEEecCCHH---HHhCCC
Confidence 5777888854 344556666666665 335554 332211 1111 1112223345443333433 378888
Q ss_pred cEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 476 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
++.++-++ || .+.+||+.+|+|+|+-...+ ....+.+ -..|+-+ ..-+.++++++|++++.
T Consensus 346 ~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 346 AVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred ccceEEec---CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 88666665 55 47999999999999876433 4444544 2556643 34578999999999997
Q ss_pred h
Q 007300 550 T 550 (609)
Q Consensus 550 ~ 550 (609)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 5
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.96 E-value=1.1 Score=49.09 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=73.9
Q ss_pred cEEEEEecccc--ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~--~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+.+..|.... .+-+..+++++.. .+..|+++..+.. ..+.+. .+++.....+.+.. .+|+..++.
T Consensus 276 vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~~w~pQ~---~iL~h~~v~ 343 (459)
T PLN02448 276 VLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVVPWCDQL---KVLCHSSVG 343 (459)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEeccCCHH---HHhccCccc
Confidence 56677777642 2224444444444 4677887655431 112221 12234333322333 378888886
Q ss_pred EecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
++-++ +| .+++||+.+|+|+|+-...+ ....+.+. +.|+-+.. ..+ --..-+.+++++++++++.+
T Consensus 344 ~fvtH---gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~-~~~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 344 GFWTH---CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKR-EVG--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred eEEec---CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEec-ccc--cCCcCcHHHHHHHHHHHhcC
Confidence 55555 44 48999999999999987543 33444442 35554300 000 00124679999999999975
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=93.83 E-value=7.1 Score=39.12 Aligned_cols=154 Identities=13% Similarity=0.076 Sum_probs=78.5
Q ss_pred HHHHHHhCCCCCCCCcEE---EEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCC-hhhHHHHHH------------
Q 007300 386 EALQAEVGLPVDRNIPVI---GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQ------------ 448 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i---~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~-~~~~~~l~~------------ 448 (609)
+..|..+-.. ...+.. +|+||..-.||+..+++.-++..+ ++..-++-|=.. ......++.
T Consensus 168 ~~~Rstywkd--~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~ 245 (355)
T PF11440_consen 168 NKYRSTYWKD--VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDC 245 (355)
T ss_dssp HHHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGG
T ss_pred HHHHHHHhhh--hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccc
Confidence 3445555432 233455 899999999999999999998766 688888888432 111111111
Q ss_pred --HHHhCCCceEEEeecChHHHHHHHHhCcEEEecCCC------CCCcHHHHHHHHcCCceEEc-CCCCcccccccC---
Q 007300 449 --LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG--- 516 (609)
Q Consensus 449 --l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~--- 516 (609)
....-+.-+-.++.|-.++.-..++.+-+...-+.. +..-.+.+|..|||+.+|-- ++|..-.+--|+
T Consensus 246 ~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~ 325 (355)
T PF11440_consen 246 DEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRY 325 (355)
T ss_dssp GG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBG
T ss_pred cCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCcee
Confidence 111111234455666666666688888777665542 44778999999999876654 344333311121
Q ss_pred ---cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 517 ---FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 517 ---~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
..|.+ ++|..|.++-.+.|.++..+
T Consensus 326 ~~~~~~~I---------~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 326 IDHPYSAI---------YFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp GSS--S-E---------EE-TTSHHHHHHHHHHHHT-
T ss_pred eccCccee---------EeccchHHHHHHHHHHHhcc
Confidence 23333 34788887777777766543
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.12 Score=52.29 Aligned_cols=44 Identities=16% Similarity=0.330 Sum_probs=38.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
|+|++|....+|+ ..||++..+.+|.+.|-+.-..|..|+++..
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~~ 44 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANPE 44 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCcc
Confidence 8999999999995 7799999999999999888777877787743
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=93.21 E-value=2.1 Score=47.11 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=64.7
Q ss_pred HHHhCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCCC----CcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
+|+...+.++-++ ||. +++||+.+|+|+|+-... .....+.+.+.|+.+.....+ ..-+.+++.++|+
T Consensus 352 IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av~ 424 (472)
T PLN02670 352 ILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESVR 424 (472)
T ss_pred HhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHHH
Confidence 7888888766665 554 899999999999997643 344455556677754100000 1136899999999
Q ss_pred HHHHhhCHHHHHHHHHH---HHHhhCCchHHHHHHHHHHHHH
Q 007300 546 RALATYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~---~~~~~fs~~~~a~~~~~~~~~l 584 (609)
+++.+.+-+.+++.+++ .+...=+-+..++.+++.+.+.
T Consensus 425 ~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 425 LAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 99976322233333322 1234444455555555555444
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.24 Score=41.81 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=58.4
Q ss_pred EEEEeCCChhhHHHHHHHHHhCCCceEEE---eecChHH--HHHHHHhCcEEEecCCCC---CCcHHHHHHHHcCCceEE
Q 007300 432 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRFE---PCGLIQLHAMRYGTVPIV 503 (609)
Q Consensus 432 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~~l~~aDv~v~pS~~E---~~gl~~lEAma~G~PvI~ 503 (609)
++|+|.- +.+...++++..+++.++..+ ..+.... ++..+..||++|++..+= .+-.+--+|-..|+|++-
T Consensus 2 vliVGG~-~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGR-EDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCC-cccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 5677752 226778888888888777777 4454444 777899999999988763 345567778899999999
Q ss_pred cCCCCcccc
Q 007300 504 ASTGGLVDT 512 (609)
Q Consensus 504 s~~gg~~e~ 512 (609)
+...|+..+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665543
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.58 Score=43.18 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=17.7
Q ss_pred HhhcCCEEEeeCHHHHHHHhc
Q 007300 311 GILESDMVLTVSPHYAQELVS 331 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~ 331 (609)
....||.|++.|.+.++.+..
T Consensus 116 saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 116 SALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHhceeeeecchhhHHHHHH
Confidence 355799999999999998775
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=91.65 E-value=2 Score=44.94 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEec-cccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceE-EE
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GV 460 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGr-l~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~ 460 (609)
.+.+...+++..+ +..+++..|. ..+.|. .+...+.++.+.+.+.+++++|+..+ .+..+++....+..+. ..
T Consensus 161 ~~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 161 QAAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNLA 237 (334)
T ss_pred HHHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccCC
Confidence 3445566666422 2244556655 345664 45777777777666789999987652 3334455444443333 22
Q ss_pred eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
+..+-.++..+++.||++|-.-. |..=+ |.+.|+|+|+=-
T Consensus 238 g~~sL~el~ali~~a~l~I~~DS----Gp~Hl-AaA~~~P~i~lf 277 (334)
T TIGR02195 238 GETSLDEAVDLIALAKAVVTNDS----GLMHV-AAALNRPLVALY 277 (334)
T ss_pred CCCCHHHHHHHHHhCCEEEeeCC----HHHHH-HHHcCCCEEEEE
Confidence 34466677789999999997642 33222 678999998754
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=91.28 E-value=4 Score=44.79 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=75.4
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEE-EeCCC-hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvi-vG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+.+..|.+... ..+.+-+.+..|...+.+|++ ++... ......+++... +++.. ...|-.+. .+|+.+++.
T Consensus 271 vvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~vg 344 (456)
T PLN02210 271 VVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAIS 344 (456)
T ss_pred eEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCcC
Confidence 567777876532 334444444444444556665 34321 111122222211 12222 23443332 378999866
Q ss_pred EecCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
++-++ ||. +++||+.+|+|+|+-...+ ....+.+ -+.|..+..-..+ ..-+.++++++|++++.+
T Consensus 345 ~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 345 CFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred eEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 66555 554 7999999999999976543 3344444 4677754100000 124778999999999975
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=91.23 E-value=1.1 Score=41.99 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=23.0
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccch
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELD 340 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 340 (609)
-..+|..++.|+..++++.+ .|++.+
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~ 160 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPE 160 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh
Confidence 35799999999999999997 898877
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.84 Score=50.64 Aligned_cols=154 Identities=19% Similarity=0.142 Sum_probs=74.8
Q ss_pred CcEEEEEecccc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~---~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
..+++..|.+.. .+-.+.++++++++ +. ++++.-++.. ...+ +.++...-+.+.. ++|+...
T Consensus 277 ~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~-----~~~l----~~n~~~~~W~PQ~---~lL~hp~ 341 (500)
T PF00201_consen 277 GVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEP-----PENL----PKNVLIVKWLPQN---DLLAHPR 341 (500)
T ss_dssp EEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSH-----GCHH----HTTEEEESS--HH---HHHTSTT
T ss_pred CEEEEecCcccchhHHHHHHHHHHHHhhC--CC-cccccccccc-----cccc----cceEEEeccccch---hhhhccc
Confidence 356677788642 22245567777766 33 7877665531 1111 2345444333443 3788777
Q ss_pred EEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 477 FILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 477 v~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
+-++-++ +|+ +++||+.+|+|+|+-..-| ....+++.+.|... -...-+.+++.++|++++++
T Consensus 342 v~~fitH---gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l--------~~~~~~~~~l~~ai~~vl~~- 409 (500)
T PF00201_consen 342 VKLFITH---GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVL--------DKNDLTEEELRAAIREVLEN- 409 (500)
T ss_dssp EEEEEES-----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEE--------GGGC-SHHHHHHHHHHHHHS-
T ss_pred ceeeeec---cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEE--------EecCCcHHHHHHHHHHHHhh-
Confidence 7666555 555 7999999999999987533 44455555567655 01223568999999999997
Q ss_pred CHHHHHHHHHHH----HHhhCCchHHHHHHHHHHH
Q 007300 552 GTQALAEMMKNG----MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 552 ~~~~~~~~~~~~----~~~~fs~~~~a~~~~~~~~ 582 (609)
+ .+++.+++- ..+..+....+-.|.|...
T Consensus 410 -~-~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~ 442 (500)
T PF00201_consen 410 -P-SYKENAKRLSSLFRDRPISPLERAVWWIEYVA 442 (500)
T ss_dssp -H-HHHHHHHHHHHTTT------------------
T ss_pred -h-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3 233322221 1344555555555555443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=90.87 E-value=3.9 Score=45.13 Aligned_cols=139 Identities=14% Similarity=0.048 Sum_probs=71.1
Q ss_pred cEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEE-eCCChhh---HHHH-HHHHHhCCCceEEEeecChHHHHHHHH
Q 007300 401 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 401 ~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~ 473 (609)
.+.+..|.+. ..+.+..+++++... +.+|+++ +...... ...+ +....+..++.... .|-... .+|+
T Consensus 282 vvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~-~w~PQ~--~iL~ 355 (475)
T PLN02167 282 VVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVC-GWAPQV--EILA 355 (475)
T ss_pred eEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeeee-ccCCHH--HHhc
Confidence 5667778764 233455556666555 4566644 3211100 0001 11111211222222 332222 2788
Q ss_pred hCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccc-ccccCcceeEecccc-cccccCCCCCHHHHHHHHHH
Q 007300 474 GADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFS-VDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 474 ~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e-~i~~~~~G~l~~~~~-~~~~~v~~~d~~~la~~I~~ 546 (609)
...+..+-++ ||. +.+||+++|+|+|+-...+ ... +++.-+.|+.+.... .+- -..-+.++++++|++
T Consensus 356 h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~--~~~~~~~~l~~av~~ 430 (475)
T PLN02167 356 HKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY--GEIVKADEIAGAVRS 430 (475)
T ss_pred CcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc--CCcccHHHHHHHHHH
Confidence 7666444444 554 8999999999999886533 222 244445676541000 000 012367899999999
Q ss_pred HHHh
Q 007300 547 ALAT 550 (609)
Q Consensus 547 ll~~ 550 (609)
++.+
T Consensus 431 ~m~~ 434 (475)
T PLN02167 431 LMDG 434 (475)
T ss_pred HhcC
Confidence 9964
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=90.72 E-value=4 Score=44.68 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=48.4
Q ss_pred HHHhCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
+++..++..+-++ ||. +++||+.+|+|+|+-...+ ....+.+. +.|+-+. ..-+.++++++|
T Consensus 337 iL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av 404 (451)
T PLN02410 337 VLSHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAV 404 (451)
T ss_pred HhCCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHH
Confidence 7888777555555 554 8999999999999876433 34444443 5676541 234778999999
Q ss_pred HHHHHhh
Q 007300 545 RRALATY 551 (609)
Q Consensus 545 ~~ll~~~ 551 (609)
++++.+.
T Consensus 405 ~~lm~~~ 411 (451)
T PLN02410 405 KRLMVEE 411 (451)
T ss_pred HHHHcCC
Confidence 9999763
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=90.35 E-value=3.8 Score=45.35 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=73.1
Q ss_pred CcEEEEEecccc--ccCHHHHHHHHhhcccCCeEEEE-EeCCCh------hhHHHHHHHHHhCCCceEEEeecChHHHHH
Q 007300 400 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 470 (609)
Q Consensus 400 ~~~i~~iGrl~~--~Kg~~~ll~a~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 470 (609)
..+.+..|.+.. .+.+..+++++..+ +..|++ ++.... .+.+.+.+.. .+.+++...+.+.. .
T Consensus 286 svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~--~~~g~~v~~w~PQ~---~ 357 (482)
T PLN03007 286 SVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT--KGKGLIIRGWAPQV---L 357 (482)
T ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh--ccCCEEEecCCCHH---H
Confidence 356777888643 33444444444444 455554 343210 0111111111 12345544444443 3
Q ss_pred HHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecccc---cccccCCCCCHHHHH
Q 007300 471 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFS---VDCEAVDPVDVAAVS 541 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~~~---~~~~~v~~~d~~~la 541 (609)
+|+.+++.++-++ || ++++||+.+|+|+|+-...+ ....+.+ -..|+-++.-. .+ -+.-+.++++
T Consensus 358 iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~---~~~~~~~~l~ 431 (482)
T PLN03007 358 ILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVK---GDFISREKVE 431 (482)
T ss_pred HhccCccceeeec---CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccc---cCcccHHHHH
Confidence 7999888666665 44 48999999999999987533 2222221 13344221000 00 0223678999
Q ss_pred HHHHHHHHhh
Q 007300 542 TTVRRALATY 551 (609)
Q Consensus 542 ~~I~~ll~~~ 551 (609)
++|++++.+.
T Consensus 432 ~av~~~m~~~ 441 (482)
T PLN03007 432 KAVREVIVGE 441 (482)
T ss_pred HHHHHHhcCc
Confidence 9999999763
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=89.38 E-value=5.6 Score=43.51 Aligned_cols=136 Identities=12% Similarity=0.020 Sum_probs=76.8
Q ss_pred cEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEEeCCCh-------hhHHHH-HHHHHhC-CCceEEEeecChHHHH
Q 007300 401 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILY-PEKARGVAKFNIPLAH 469 (609)
Q Consensus 401 ~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~-~~~v~~~~~~~~~~~~ 469 (609)
-+.+..|.+. ..+-+..|..++... +..|+++=..+. .....+ +....+. +.++....+.+...
T Consensus 272 VvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~-- 346 (451)
T PLN03004 272 VVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP-- 346 (451)
T ss_pred eEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH--
Confidence 5667778874 344555666666655 334554433210 011101 1111111 12344433444443
Q ss_pred HHHHhCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCC----CCccccccc-CcceeEecccccccccCCCCCHHHHHHH
Q 007300 470 MIIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTT 543 (609)
Q Consensus 470 ~~l~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~----gg~~e~i~~-~~~G~l~~~~~~~~~~v~~~d~~~la~~ 543 (609)
+|+.+++.++-++ ||. +++||+++|+|+|+-.. ......+.+ -+.|..+.. . + -..-+.++++++
T Consensus 347 -iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~-~-~---~~~~~~e~l~~a 417 (451)
T PLN03004 347 -VLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNE-S-E---TGFVSSTEVEKR 417 (451)
T ss_pred -HhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecC-C-c---CCccCHHHHHHH
Confidence 7999999776666 554 89999999999999764 334445543 356765410 0 0 002377999999
Q ss_pred HHHHHHh
Q 007300 544 VRRALAT 550 (609)
Q Consensus 544 I~~ll~~ 550 (609)
|++++.+
T Consensus 418 v~~vm~~ 424 (451)
T PLN03004 418 VQEIIGE 424 (451)
T ss_pred HHHHhcC
Confidence 9999975
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.11 E-value=12 Score=41.44 Aligned_cols=74 Identities=16% Similarity=0.048 Sum_probs=48.1
Q ss_pred HHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
+|+..++..+-++ || ++.+||+.+|+|+|+-..-+ ....+ +.-+.|+.+.....+ -..-+.++++++|
T Consensus 352 iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~av 425 (480)
T PLN00164 352 ILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERAV 425 (480)
T ss_pred HhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHHH
Confidence 7898887666665 55 48999999999999976432 33333 334567654100000 0013679999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
++++.+
T Consensus 426 ~~vm~~ 431 (480)
T PLN00164 426 RSLMGG 431 (480)
T ss_pred HHHhcC
Confidence 999975
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=89.05 E-value=7 Score=42.75 Aligned_cols=137 Identities=7% Similarity=0.058 Sum_probs=74.0
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
-+.+..|.+.. -..+.+.+.+.-|...++-+++-.+....+.+.+.+-. .++++....+.+.. .+|+..++.++
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~W~PQ~---~iL~H~~v~~F 339 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLKWSPQL---QVLSNKAIGCF 339 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeCCCCHH---HHhCCCccceE
Confidence 46677787542 23344555555553334433333211111111111111 13345544333433 38999887777
Q ss_pred cCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 481 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-++ || ++++||+++|+|+|+-..-+ ....+.+. +.|+-+.. .+.+ ..-+.++++++|++++.+
T Consensus 340 vtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~--~~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 340 MTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA--EKES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred Eec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee--cccC--CcccHHHHHHHHHHHhcC
Confidence 766 55 58999999999999986433 34445443 45664310 0000 012679999999999975
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.96 E-value=2.8 Score=41.56 Aligned_cols=102 Identities=16% Similarity=0.122 Sum_probs=61.1
Q ss_pred CCcEEEEEeccccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCC-ceEEEeecChHHHHHHHHhC
Q 007300 399 NIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~--~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~~l~~a 475 (609)
+..++++.|.-.+.|.. +...+.+..|.+...+++++|...+..++..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 33567777776777764 4488888888776688999998764334555555554332 23333445666777899999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
|++|-+- .|..=+ |.+.|+|+|+--
T Consensus 185 ~~~I~~D----tg~~Hl-A~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGND----TGPMHL-AAALGTPTVALF 209 (247)
T ss_dssp SEEEEES----SHHHHH-HHHTT--EEEEE
T ss_pred CEEEecC----ChHHHH-HHHHhCCEEEEe
Confidence 9999764 343333 788999998874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=88.80 E-value=13 Score=40.60 Aligned_cols=73 Identities=7% Similarity=0.044 Sum_probs=49.8
Q ss_pred HHHhCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecccccccccCCCCCHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
+|+...+.++-++ ||. +++||+.+|+|+|+-..-+ ....+.+ -..|..+..- .+ ..-+.+++.++|
T Consensus 324 iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~----~~~~~~~l~~ai 395 (442)
T PLN02208 324 ILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE-KT----GWFSKESLSNAI 395 (442)
T ss_pred HhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc-cC----CcCcHHHHHHHH
Confidence 7899888777776 665 7999999999999976433 3343333 4567654100 00 013778999999
Q ss_pred HHHHHhh
Q 007300 545 RRALATY 551 (609)
Q Consensus 545 ~~ll~~~ 551 (609)
++++++.
T Consensus 396 ~~~m~~~ 402 (442)
T PLN02208 396 KSVMDKD 402 (442)
T ss_pred HHHhcCC
Confidence 9999753
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=88.60 E-value=4.6 Score=42.57 Aligned_cols=102 Identities=13% Similarity=0.012 Sum_probs=64.5
Q ss_pred CcEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCC-CceE-EEeecChHHHHHHHHhC
Q 007300 400 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKAR-GVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~-~~~~~~~~~~~~~l~~a 475 (609)
..+++..|.-.+.|. .+...+.++.|.+.+.+++++|...+.-.+..+++..... ..+. ..+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 356677777666675 4577788877766688999987654322233344443321 1222 33444666777899999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
|++|-.- .|..=+ |.+.|+|+|+--.
T Consensus 264 ~l~v~nD----SGp~Hl-AaA~g~P~v~lfG 289 (352)
T PRK10422 264 QLFIGVD----SAPAHI-AAAVNTPLICLFG 289 (352)
T ss_pred CEEEecC----CHHHHH-HHHcCCCEEEEEC
Confidence 9999654 343333 6789999987643
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.54 E-value=0.11 Score=48.50 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=50.3
Q ss_pred ceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccccccCcceeEeccccc
Q 007300 456 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSV 527 (609)
Q Consensus 456 ~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~i~~~~~G~l~~~~~~ 527 (609)
++..+ .|. +.+..+++.||++|.- +=+.++.|++++|+|.|.-...+ ....+.+...|..+
T Consensus 56 ~v~~~-~~~-~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~----- 124 (167)
T PF04101_consen 56 NVKVF-GFV-DNMAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML----- 124 (167)
T ss_dssp CCEEE-CSS-SSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS-----
T ss_pred cEEEE-ech-hhHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc-----
Confidence 35443 333 2366799999988842 23478999999999998766554 22223333334432
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 528 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 528 ~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
.-...+++.|.++|..++.+ ......+.
T Consensus 125 ---~~~~~~~~~L~~~i~~l~~~--~~~~~~~~ 152 (167)
T PF04101_consen 125 ---DESELNPEELAEAIEELLSD--PEKLKEMA 152 (167)
T ss_dssp ---ECCC-SCCCHHHHHHCHCCC--HH-SHHHC
T ss_pred ---CcccCCHHHHHHHHHHHHcC--cHHHHHHH
Confidence 01223367899999998887 44444443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=88.53 E-value=7.7 Score=42.52 Aligned_cols=136 Identities=13% Similarity=0.132 Sum_probs=75.7
Q ss_pred cEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEE-EeCC-C------hhhH---HHHHHHHHhCCCceEEEeecChHH
Q 007300 401 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTG-K------KPME---KQLEQLEILYPEKARGVAKFNIPL 467 (609)
Q Consensus 401 ~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lvi-vG~g-~------~~~~---~~l~~l~~~~~~~v~~~~~~~~~~ 467 (609)
-+.+..|.+. ..+-.+.+..++..+.+ .|++ +.+. . .... ...+.+..+.+++.... .|-.+.
T Consensus 263 VvyvsfGS~~~l~~~q~~ela~gL~~s~~---~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ~ 338 (455)
T PLN02152 263 VIYVSFGTMVELSKKQIEELARALIEGKR---PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQI 338 (455)
T ss_pred eEEEEecccccCCHHHHHHHHHHHHHcCC---CeEEEEecCcccccccccccccccccchhHHHhccCCeEEE-eeCCHH
Confidence 4667778765 45566777777777632 4444 3321 0 0000 01123333334444333 343222
Q ss_pred HHHHHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHH
Q 007300 468 AHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVS 541 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la 541 (609)
.+|+..++.++-++ || ++++||+.+|+|+|+-...+ ....+.+. +.|+-+.. +.+ +.-+.++++
T Consensus 339 --~iL~h~~vg~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~-~~~----~~~~~e~l~ 408 (455)
T PLN02152 339 --EVLRHRAVGCFVTH---CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRE-NSE----GLVERGEIR 408 (455)
T ss_pred --HHhCCcccceEEee---CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeec-CcC----CcCcHHHHH
Confidence 37999998777666 44 47999999999999876433 33344331 23443210 000 123679999
Q ss_pred HHHHHHHHh
Q 007300 542 TTVRRALAT 550 (609)
Q Consensus 542 ~~I~~ll~~ 550 (609)
++|++++.+
T Consensus 409 ~av~~vm~~ 417 (455)
T PLN02152 409 RCLEAVMEE 417 (455)
T ss_pred HHHHHHHhh
Confidence 999999975
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.99 E-value=12 Score=41.18 Aligned_cols=138 Identities=12% Similarity=0.046 Sum_probs=73.2
Q ss_pred cEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHH-HHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 401 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 401 ~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
.+.+..|.+. ..+-++.++.++..+ +..|+++ .+......+.+ +.+..+.+++.....+.+.. .+|+...
T Consensus 277 VVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~---~IL~H~~ 350 (468)
T PLN02207 277 VVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQV---EILAHKA 350 (468)
T ss_pred EEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHH---HHhcccc
Confidence 5667777764 233455666666655 3455543 32110000001 12222233344333333333 2788887
Q ss_pred EEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecc-cccccccCCCCCHHHHHHHHHHHHH
Q 007300 477 FILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 477 v~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~-~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
+.++-++ ||. +++||+.+|+|+|+-...+ ....+.+ -+.|+-++. ...+. -..-+.+++.++|++++.
T Consensus 351 vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~--~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 351 VGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS--DEIVNANEIETAIRCVMN 425 (468)
T ss_pred cceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc--CCcccHHHHHHHHHHHHh
Confidence 7666665 554 7999999999999876543 3333332 455653310 00000 012367899999999996
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=87.44 E-value=7.4 Score=40.80 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=62.9
Q ss_pred cEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCC-ceE-EEeecChHHHHHHHHhCc
Q 007300 401 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~-~~~~~~~~~~~~~l~~aD 476 (609)
.+++..|.-.+.|. .+...+.++.|.+.+.+++++|...+.-.+..+++....+. ++. ..+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666555554 56777777777666789999986542222334444433322 233 334446677778999999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
++|-.- .|..=+ |.|.|+|+|+=-
T Consensus 263 l~Vs~D----SGp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 263 LFIGVD----SVPMHM-AAALGTPLVALF 286 (344)
T ss_pred EEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 999763 343333 788999999864
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=87.43 E-value=3.7 Score=41.64 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=65.5
Q ss_pred EEEEEecccccc--CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhC-CCceE-EEeecChHHHHHHHHhCcE
Q 007300 402 VIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKAR-GVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 402 ~i~~iGrl~~~K--g~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~-~~~~~~~~~~~~~l~~aDv 477 (609)
+++..|.-.+.| ..+...+.++.+.+.+++++++|... .++..+++.... ..++. ..+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 555666555555 45788888888876689999998755 334445554443 12222 2333455667789999999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 510 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 510 (609)
++-+. .|..-+ |.+.|+|+|+--.....
T Consensus 202 ~I~~D----sg~~Hl-A~a~~~p~i~l~g~~~~ 229 (279)
T cd03789 202 VVTND----SGPMHL-AAALGTPTVALFGPTDP 229 (279)
T ss_pred EEeeC----CHHHHH-HHHcCCCEEEEECCCCc
Confidence 99774 344444 46999999887544333
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.28 E-value=8.6 Score=42.45 Aligned_cols=135 Identities=10% Similarity=-0.003 Sum_probs=69.5
Q ss_pred cEEEEEecccc--ccCHHHHHHHHhhcccCCeEEEEEeCCC-h---hhHHHHHHHHHhC-CCceEEEeecChHHHHHHHH
Q 007300 401 PVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGK-K---PMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIA 473 (609)
Q Consensus 401 ~~i~~iGrl~~--~Kg~~~ll~a~~~l~~~~~~lvivG~g~-~---~~~~~l~~l~~~~-~~~v~~~~~~~~~~~~~~l~ 473 (609)
.+.+..|.+.. .+-+..+++++... +..|+++-..+ . ........+..+. +..++...+.+.. .+|+
T Consensus 285 vVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~---~vL~ 358 (477)
T PLN02863 285 VVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQV---AILS 358 (477)
T ss_pred eEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHH---HHhc
Confidence 46677787642 22345555555544 55666553321 0 0000011111111 2224333333433 3787
Q ss_pred hCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccc-cCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 474 GADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 474 ~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~-~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
...+.++-++ || .+++||+++|+|+|+-...+ ....+. .-+.|.-+.. +. -..-+.++++++|+++
T Consensus 359 h~~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~---~~--~~~~~~~~v~~~v~~~ 430 (477)
T PLN02863 359 HRAVGAFLTH---CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE---GA--DTVPDSDELARVFMES 430 (477)
T ss_pred CCCcCeEEec---CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc---CC--CCCcCHHHHHHHHHHH
Confidence 7555555444 44 48999999999999976533 333333 3356764410 00 0122678999999998
Q ss_pred HH
Q 007300 548 LA 549 (609)
Q Consensus 548 l~ 549 (609)
+.
T Consensus 431 m~ 432 (477)
T PLN02863 431 VS 432 (477)
T ss_pred hh
Confidence 84
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.78 E-value=11 Score=41.64 Aligned_cols=140 Identities=12% Similarity=0.096 Sum_probs=72.8
Q ss_pred cEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEEeCCC------------hhhHHH-HHHHHHhCCCceEEEeecCh
Q 007300 401 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQ-LEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 401 ~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lvivG~g~------------~~~~~~-l~~l~~~~~~~v~~~~~~~~ 465 (609)
.+.+..|.+. ..+-+..++.++..+ +.+|+++-.++ ....+. -.....+..++.....+.+.
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ 352 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQ 352 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCH
Confidence 4667778864 244566666666665 44555542211 000011 11111122233433333343
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcH-HHHHHHHcCCceEEcCCCC----cc-cccccCcceeEeccc-cccc--ccCCCCC
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LV-DTVEEGFTGFQMGSF-SVDC--EAVDPVD 536 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~-e~i~~~~~G~l~~~~-~~~~--~~v~~~d 536 (609)
. .+|+...+.++-++ ||. +++||+.+|+|+|+-...+ .. ..++.-+.|..+..- ..+. ..-..-+
T Consensus 353 ~---~iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~ 426 (481)
T PLN02554 353 V---AVLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVT 426 (481)
T ss_pred H---HHhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEc
Confidence 3 27866666555554 544 8999999999999986533 33 334444566654100 0000 0001236
Q ss_pred HHHHHHHHHHHHH
Q 007300 537 VAAVSTTVRRALA 549 (609)
Q Consensus 537 ~~~la~~I~~ll~ 549 (609)
.+++.++|++++.
T Consensus 427 ~e~l~~av~~vm~ 439 (481)
T PLN02554 427 AEEIERGIRCLME 439 (481)
T ss_pred HHHHHHHHHHHhc
Confidence 7899999999996
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=86.19 E-value=19 Score=39.33 Aligned_cols=72 Identities=8% Similarity=0.083 Sum_probs=47.7
Q ss_pred HHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccc-cCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~-~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
+++...+.++-++ || ++.+||+.+|+|+|+-...+ ....+. +-..|+.+.. .+. ..-+.+++.++|
T Consensus 330 vL~h~~v~~FvtH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~--~~~---~~~~~e~i~~av 401 (453)
T PLN02764 330 ILSHPSVGCFVSH---CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAR--EET---GWFSKESLRDAI 401 (453)
T ss_pred HhcCcccCeEEec---CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecc--ccC---CccCHHHHHHHH
Confidence 7888777655555 44 48999999999999987544 334443 3355654310 000 023779999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
++++++
T Consensus 402 ~~vm~~ 407 (453)
T PLN02764 402 NSVMKR 407 (453)
T ss_pred HHHhcC
Confidence 999976
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=86.00 E-value=18 Score=39.90 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=71.0
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCC--ChhhH-HHH-HHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTG--KKPME-KQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g--~~~~~-~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.+.+..|.+. .-..+.+.+.+..|...+.+|+++ ... ..... ..+ +....+.+++.....+.+.. .+|+.-
T Consensus 279 VvyvsfGS~~-~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~---~iL~H~ 354 (480)
T PLN02555 279 VVYISFGTVV-YLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQE---KVLAHP 354 (480)
T ss_pred eeEEEecccc-CCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHH---HHhCCC
Confidence 4666778764 222334444444443335576655 311 00000 001 12222233344333333332 267655
Q ss_pred cEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 476 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
.+.++-++ || ++.+||+.+|+|+|+-..-+ ....+.+. +.|+-++.-..+- ..-+.+++.++|++++.
T Consensus 355 ~v~~FvtH---~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v~~vm~ 428 (480)
T PLN02555 355 SVACFVTH---CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECLLEATV 428 (480)
T ss_pred ccCeEEec---CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHHHHHhc
Confidence 55444444 44 48999999999999986533 33444443 6676542000000 11257899999999996
Q ss_pred h
Q 007300 550 T 550 (609)
Q Consensus 550 ~ 550 (609)
+
T Consensus 429 ~ 429 (480)
T PLN02555 429 G 429 (480)
T ss_pred C
Confidence 5
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=85.71 E-value=15 Score=37.83 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=63.0
Q ss_pred cEEEEEeccccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~--~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.++++.|.-.+.|.. +...+.++.|.+.+.+++++|.++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 466677765566654 5777888777656788888864442 22334455444443 2333455666677899999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
|-.-. |..=+ |.+.|+|+|+--
T Consensus 259 I~~DS----gp~Hl-Aaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVDT----GLTHL-AAALDKPTVTLY 280 (319)
T ss_pred EeCCC----hHHHH-HHHcCCCEEEEE
Confidence 97642 33323 678899998754
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=85.24 E-value=20 Score=39.59 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=48.1
Q ss_pred HHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 471 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
+++...+..+-++ || ++.+||+.+|+|+|+-...+ ....+ +.-+.|..+.. .+ ..-+.++++++|
T Consensus 351 iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~--~~----~~~~~~~l~~av 421 (481)
T PLN02992 351 ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD--PK----EVISRSKIEALV 421 (481)
T ss_pred HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC--CC----CcccHHHHHHHH
Confidence 7888887665555 55 48999999999999987543 33444 34456665410 00 123779999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
++++.+
T Consensus 422 ~~vm~~ 427 (481)
T PLN02992 422 RKVMVE 427 (481)
T ss_pred HHHhcC
Confidence 999965
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=84.60 E-value=50 Score=33.69 Aligned_cols=100 Identities=14% Similarity=-0.005 Sum_probs=58.8
Q ss_pred cEEEEEeccc---cccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 401 PVIGFIGRLE---EQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 401 ~~i~~iGrl~---~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
+.|++.-|-. ..+..+.+.+++..+.+ .+.+++++.-....-.+..+++....+.........+..++-.+++.||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4565554431 12235677888888765 3777766653322233445555555433222223445666667899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
++|-... - ..+=|+.+|+|+|+-+
T Consensus 253 ~vI~~Rl---H--~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL---H--ALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech---H--HHHHHHHcCCCEEEee
Confidence 7765443 1 3555899999999765
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=84.44 E-value=6.3 Score=41.27 Aligned_cols=99 Identities=21% Similarity=0.237 Sum_probs=69.9
Q ss_pred cEEEEEe-ccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcE
Q 007300 401 PVIGFIG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 401 ~~i~~iG-rl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
.+++..| .-...|. .+...+.++.+.+...++++.|... .++..+++...++..+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4666777 5546665 4577888888877778999999773 667777787777643334445556667779999999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
+|-+. .|..=+ |.+.|+|+|+--.
T Consensus 255 ~I~~D----Sg~~Hl-AaA~~~P~I~iyg 278 (334)
T COG0859 255 VIGND----SGPMHL-AAALGTPTIALYG 278 (334)
T ss_pred EEccC----ChHHHH-HHHcCCCEEEEEC
Confidence 88765 344434 7899999998753
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=84.16 E-value=1.1 Score=42.99 Aligned_cols=40 Identities=30% Similarity=0.396 Sum_probs=30.0
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCc
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~ 131 (609)
||||+.+..- . .+.-+..|.++|.+.||+|.|++|...+-
T Consensus 1 M~ILlTNDDG-i------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~S 40 (196)
T PF01975_consen 1 MRILLTNDDG-I------DAPGIRALAKALSALGHDVVVVAPDSEQS 40 (196)
T ss_dssp SEEEEE-SS--T------TSHHHHHHHHHHTTTSSEEEEEEESSSTT
T ss_pred CeEEEEcCCC-C------CCHHHHHHHHHHHhcCCeEEEEeCCCCCc
Confidence 8999999862 1 22237789999988899999999986643
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=84.04 E-value=5.5 Score=40.25 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=58.9
Q ss_pred CCCcEEEEEeccccc-------cCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHhCCCceEEEeecCh
Q 007300 398 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~-------Kg~~~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 465 (609)
.+++.|++....... .....+++.+..+.+ ++.+++|-=-... .....+.++.. .. ++... .+.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~-~~~~~--~~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LP-NVVII--DDD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CC-CeEEE--CCC
Confidence 356788888887653 234555666665544 5788776543211 11122333222 22 12222 122
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
-....++..||.++.- .+.+.+||+.+|+||++--.
T Consensus 191 ~~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecC
Confidence 2345689999988754 35689999999999999653
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=82.89 E-value=5 Score=35.21 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=25.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||+|+.. |.....=..+-+..|+.+.+++||+|.++.+.-
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 89999986 321111123456779999999999999999873
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=82.44 E-value=15 Score=38.61 Aligned_cols=111 Identities=16% Similarity=0.140 Sum_probs=63.8
Q ss_pred HHHHHhCCCCCCCCcEEEEEecc-ccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCC----ceE-
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KAR- 458 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl-~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~v~- 458 (609)
.+.+.+++..+ +..+++..|.- .+.|. .+...+.++.|.+.+++++++|... .++..+++....+. ++.
T Consensus 169 ~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T PRK10916 169 ETCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRN 245 (348)
T ss_pred HHHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceee
Confidence 34445554322 22455566653 35554 4566777777655678999998654 23333444333321 122
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
..+..+-.++..+++.||++|-.- .|..=+ |.+.|+|+|+=-
T Consensus 246 l~g~~sL~el~ali~~a~l~I~nD----TGp~Hl-AaA~g~P~valf 287 (348)
T PRK10916 246 LAGETQLEQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_pred ccCCCCHHHHHHHHHhCCEEEecC----ChHHHH-HHHhCCCEEEEE
Confidence 223345566667999999999654 333333 788999998753
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=82.04 E-value=5.8 Score=32.59 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=24.7
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecC
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 266 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~ 266 (609)
+.||| |.|...+.+..-.+.... ..|.++|||-|++
T Consensus 50 ~I~IV-HgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RIDIV-HGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred CeeEE-EeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 58999 999766655544333221 1599999999964
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=80.57 E-value=2.7 Score=37.12 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=47.8
Q ss_pred eEEEEEeC-CChhhHHHHHHHHHhCCC-ceEEEeecCh----------------------HHHHHHHHhCcEEEecCCCC
Q 007300 430 VQIIVLGT-GKKPMEKQLEQLEILYPE-KARGVAKFNI----------------------PLAHMIIAGADFILIPSRFE 485 (609)
Q Consensus 430 ~~lvivG~-g~~~~~~~l~~l~~~~~~-~v~~~~~~~~----------------------~~~~~~l~~aDv~v~pS~~E 485 (609)
+++.|+|. |. +-+.+.+...+.++ ++........ +.+..++..+|+++--|.-+
T Consensus 1 mrV~i~G~~Gr--MG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p~ 78 (124)
T PF01113_consen 1 MRVGIVGASGR--MGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNPD 78 (124)
T ss_dssp EEEEEETTTSH--HHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-HH
T ss_pred CEEEEECCCCH--HHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCChH
Confidence 35677777 55 66666666555443 3333332222 34567888899998877555
Q ss_pred CCcHHHHHHHHcCCceEEcCCCCccc
Q 007300 486 PCGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 486 ~~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
..--.+-.++.+|+|+|+..+|.-.+
T Consensus 79 ~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 79 AVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp HHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred HhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 55455667888999999988877443
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 609 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 0.0 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 4e-53 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 2e-51 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 3e-51 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 1e-50 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 2e-49 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 2e-11 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-11 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 3e-11 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 1e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 9e-06 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 9e-06 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 7e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 610 bits (1575), Expect = 0.0
Identities = 167/507 (32%), Positives = 245/507 (48%), Gaps = 49/507 (9%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEF 60
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALS 115
Query: 205 QAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 264
AA + P D+V A+DW ++ P Y++ + IH
Sbjct: 116 LAAARIGAGVLPGW-----RP-DMVH-AHDWQAAMTPVYMRYAE-----TPEIPSLLTIH 163
Query: 265 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324
NIA+QG+F F L LPA + I+ YN ++++K G+ + + TVSP
Sbjct: 164 NIAFQGQFGANIFSKLALPAHA-FGMEGIEYYND------VSFLKGGLQTATALSTVSPS 216
Query: 325 YAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 382
YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A+ + +
Sbjct: 217 YAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAAN-LKNRA 274
Query: 383 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPM 442
L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G +
Sbjct: 275 LNKKAVAEHFRIDDD-GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL 333
Query: 443 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPI 502
E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+
Sbjct: 334 EGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393
Query: 503 VASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 553
VA TGGL DTV + TG Q PV + + +RR + Y
Sbjct: 394 VARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYYHD 443
Query: 554 QAL-AEMMKNGMAQDLSWKGPAKKWEE 579
L +M K GM D+SW+ A +
Sbjct: 444 PKLWTQMQKLGMKSDVSWEKSAGLYAA 470
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 608 bits (1571), Expect = 0.0
Identities = 151/521 (28%), Positives = 239/521 (45%), Gaps = 54/521 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIEL 143
+ +L V +E+ P KTGGL DV+G LP A A+G + P + + D VV
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ H GV +D P + Y Y DN LRF+LL
Sbjct: 61 DTFA--GHITLLFGHYNGVGIYLIDAPHLYDR-----PGSPYHDTNLFAYTDNVLRFALL 113
Query: 204 CQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 263
E L+ V A+DWH L P YL +P AK VF +
Sbjct: 114 GWVGAEMASGLD-------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTV 160
Query: 264 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323
HN+AYQG F + LP F + ++ + I+++KAG+ +D + VSP
Sbjct: 161 HNLAYQGMFYAHHMNDIQLPWSF-FNIHGLEFNGQ------ISFLKAGLYYADHITAVSP 213
Query: 324 HYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 379
YA+E+ + ++ ++ R+ + G++NG+D + W+P TD + +Y T ++
Sbjct: 214 TYAREITEPQ-FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT-LE 271
Query: 380 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK 439
K K LQ +GL VD +P+ + RL QKG D++ A+P +++ Q+ +LG G
Sbjct: 272 DKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD 331
Query: 440 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 499
+++ YP + ++ +H I+ GAD IL+PSRFEPCGL QL+ ++YGT
Sbjct: 332 PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT 391
Query: 500 VPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550
+P+V TGGL DTV + +GF + + ++ +RRA
Sbjct: 392 LPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRAFVL 441
Query: 551 YGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 590
+ +L + + MA D SW+ AK + E L++
Sbjct: 442 WSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEHHH 482
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 450 bits (1160), Expect = e-154
Identities = 103/501 (20%), Positives = 178/501 (35%), Gaps = 84/501 (16%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L +G E P K GGL + L + ALA+ GH V+ P + +++ + +++
Sbjct: 3 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIR 57
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V+ + + + + +YG + +
Sbjct: 58 VFGEEVQVKVSYEERGNLRIYRIGGGLL-------DSEDVYG----PGWDGLIRKAVTFG 106
Query: 205 QAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 264
+A++ L DVV +DWHT +K +K VF IH
Sbjct: 107 RASVLLLNDLLREEPLP-----DVV-HFHDWHTVFAGALIKKYFKIP-------AVFTIH 153
Query: 265 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324
+ A F L + Y I+ G +D+V TVS
Sbjct: 154 RLNKSKLPA-FYFHEAGLSE--------LAPYPD------IDPEHTGGYIADIVTTVSRG 198
Query: 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384
Y + G + + I + NG+D WN ++
Sbjct: 199 YLIDE-----WGFFRN---FEGKITYVFNGIDCSFWNESYLT------------GSRDER 238
Query: 385 KEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK----ENVQIIVLGTGK 439
K++L ++ G+ FIGR QKG D+L AI + ++ I++G G
Sbjct: 239 KKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD 295
Query: 440 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 499
+E LE + + + DF++IPS FEP GL+ L AM G
Sbjct: 296 PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA 355
Query: 500 VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA-E 558
+PI ++ GGL D + TG D ++ + +AL +
Sbjct: 356 IPIASAVGGLRDIITNE-TGI---LV-------KAGDPGELANAILKALELSRSDLSKFR 404
Query: 559 MMKNGMAQDLSWKGPAKKWEE 579
A SW+ A+++ +
Sbjct: 405 ENCKKRAMSFSWEKSAERYVK 425
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 1e-90
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 350 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 409
G NG+D WN ++ K++L ++ G+ FIGR
Sbjct: 1 GSHNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDEG---VTFMFIGRF 45
Query: 410 -EEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 464
QKG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLS 105
Query: 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 524
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D + TG
Sbjct: 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL--- 161
Query: 525 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 570
V D ++ + +AL L++ +N + +S+
Sbjct: 162 -------VKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 199
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 62/295 (21%)
Query: 296 YNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 354
+N + + GI +SD+V VS E EL + I+ + N
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH-------ELVKPNKD--IQTVYNF 187
Query: 355 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 414
+D + + L+ E G+ ++ I + K
Sbjct: 188 IDERVYFKRD--------------------MTQLKKEYGISESE--KILIHISNFRKVKR 225
Query: 415 SDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF--NIPLA 468
+ A + E + +++++G G P + QL K + F
Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDG--PEFCTILQLV-----KNLHIEDRVLFLGKQDNV 278
Query: 469 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 527
++A +D +L+ S E GL+ L AM G VP + + GG+ + ++ G TG+
Sbjct: 279 AELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVIQHGDTGY------- 330
Query: 528 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA---QDLSWKGPAKKWEE 579
+ D V+ + L + M + + + ++E
Sbjct: 331 ---LCEVGDTTGVADQAIQLLKD--EELHRNMGERARESVYEQFRSEKIVSQYET 380
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-23
Identities = 37/279 (13%), Positives = 88/279 (31%), Gaps = 51/279 (18%)
Query: 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 373
+S ++ ++ + + E + + G+
Sbjct: 136 KSTKLMMLTDKQIADFQ--KHYQTEPERFQI------LPPGIYPDRKYS----------- 176
Query: 374 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 433
+ P +E + + G+ + ++ +G +KG D A+ +
Sbjct: 177 -----EQIPNSREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT 229
Query: 434 VLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHM--IIAGADFILIPSRFEPCG 488
+L + ++ E L + GV F + ++A AD +L P+ E G
Sbjct: 230 LLFVVGQDKPRKFEALA-----EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAG 284
Query: 489 LIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547
++ L A+ G P++ + G + + G + +P ++ +R+A
Sbjct: 285 IVLLEAITAGL-PVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKA 334
Query: 548 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 584
L + +N A +K + +
Sbjct: 335 LTQ--SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 9e-23
Identities = 83/517 (16%), Positives = 162/517 (31%), Gaps = 139/517 (26%)
Query: 82 GVGLNILFVGTEVAP-----WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD 136
G + + + +P +GG+ + LA G V
Sbjct: 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRP-----S 72
Query: 137 TDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
++ + E +R V + L+K E+
Sbjct: 73 QGEIVRV-----AENLR--------VINIAAGPYEGLSK---------------EELPTQ 104
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 256
F+ + + YD++ ++ W + + L+ +++
Sbjct: 105 LAAFTGGMLSFTRREK-----------VTYDLI-HSHYWLSGQVGWLLRDLWR------- 145
Query: 257 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILES 315
++ H +A + ++ D + + + +
Sbjct: 146 IPLIHTAHTLAA-VKNSYRDDSDTPESEARR-------------------ICEQQLVDNA 185
Query: 316 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 375
D++ + Q+L+ + D I + G DV+ ++P D+
Sbjct: 186 DVLAVNTQEEMQDLM--HHYDADPDRISV------VSPGADVELYSPGNDR--------- 228
Query: 376 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQ 431
E + E+G+P+ V+ F+GRL+ KG +L A+ N++
Sbjct: 229 --------ATERSRRELGIPLHT--KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLR 278
Query: 432 IIVLG--TGKKPMEKQLEQLEILYPEKARGVAK---FNIPLAH----MIIAGADFILIPS 482
+I+ G +G + + GV K F P + AD + +PS
Sbjct: 279 VIICGGPSGPNATPDTYRHMA-----EELGVEKRIRFLDPRPPSELVAVYRAADIVAVPS 333
Query: 483 RFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 541
E GL+ + A GT P++A+ GGL V EG TG VD A +
Sbjct: 334 FNESFGLVAMEAQASGT-PVIAARVGGLPIAVAEGETGL----------LVDGHSPHAWA 382
Query: 542 TTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKK 576
+ L + M ++ A+ SW A +
Sbjct: 383 DALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQ 417
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 3e-21
Identities = 73/504 (14%), Positives = 148/504 (29%), Gaps = 111/504 (22%)
Query: 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159
GG + + ALA G +V I R + KD + E+ + KVR
Sbjct: 32 FGGQLVYVKEVSLALAEMGVQV-DIITR--RIKDENWPEFSGEIDYYQETNKVR------ 82
Query: 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSN 219
+ R+ FL K +L + L + +
Sbjct: 83 --IVRIPFGGDKFLPK--------------------EEL-WPYLHEYVNKIINFY----- 114
Query: 220 KYFSGPYDVVFVANDWHTSLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFEDFG 278
+ VV + L LK + P F H++ Q
Sbjct: 115 REEGKFPQVV-TTHYGDGGLAGVLLKNIKGLP--------FTFTGHSLGAQKM------- 158
Query: 279 LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 338
L + + + + R I + + +D ++ + S +
Sbjct: 159 -EKLNVNTSNFKEMDERFKFHRR---IIAERLTMSYADKIIVSTSQERFGQYSHDLYRGA 214
Query: 339 LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398
++ I G++ + ++ K + + L+ ++G
Sbjct: 215 VNVEDDDK-FSVIPPGVNTRVFDGEYGD------------KIKAKITKYLERDLGSE-RM 260
Query: 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ-IIVLGTGKKPMEKQLEQLEILYPE 455
+P I RL+++K L A + + ++ L + P E +
Sbjct: 261 ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEI 320
Query: 456 --------KARGVA-KFNIPLAHM----------IIAGADFILIPSRFEPCGLIQLHAMR 496
K ++ + + + + S +EP GL + AM
Sbjct: 321 LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMA 380
Query: 497 YGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 555
G P V + GG + ++ G G VDP D ++ + +A + +
Sbjct: 381 SGL-PAVVTRNGGPAEILDGGKYGV----------LVDPEDPEDIARGLLKAFES--EET 427
Query: 556 LAEMMKNGM---AQDLSWKGPAKK 576
+ + G + +W+ A+
Sbjct: 428 WSAYQEKGKQRVEERYTWQETARG 451
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 3e-20
Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 71/286 (24%)
Query: 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 373
E D++ +S + + + +G+DV+ + P
Sbjct: 140 EVDVLTYISQYTLRRFK---SAFGSHPTFEH------LPSGVDVKRFTP----------- 179
Query: 374 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQ 431
A P K A + ++G PVI RL +KG D L A+P I + Q
Sbjct: 180 ------ATPEDKSATRKKLGFTDTT--PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231
Query: 432 IIVLGTGKKPMEKQLEQLEILYPEKARGVAK-----FNIPLAHM--IIAGADFILIPSR- 483
++++G+G E L +L A V++ + M +A AD +P+R
Sbjct: 232 LLIVGSG--RYESTLRRL-------ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPART 282
Query: 484 ------FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 536
E G++ L A G VP++A +GG +TV TG V+ D
Sbjct: 283 RGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPA-TGL----------VVEGSD 330
Query: 537 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 579
V +S + L A M G + + SW+ ++
Sbjct: 331 VDKLSELLIELLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTN 374
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 88.5 bits (219), Expect = 2e-18
Identities = 56/394 (14%), Positives = 116/394 (29%), Gaps = 73/394 (18%)
Query: 224 GPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP 283
G D++ + N +L+ L H + P
Sbjct: 406 GKPDLI-IGNYSDGNLVASLLA-------HKLGVTQCTIAHAL-----------EKTKYP 446
Query: 284 AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH---YAQELVSGEDKGVELD 340
D Y+ + + +D ++T + ++E V +
Sbjct: 447 DSDIYWKKLDDKYHFSCQ---FTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFT 503
Query: 341 NIIRKTGIKG----------IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390
+ G + G D+ + P T++ + S + + +
Sbjct: 504 LPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI-EELLYSDVENKE 562
Query: 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG---------TGK 439
+ + D+ P++ + RL+ K L + E ++V+G +
Sbjct: 563 HLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEE 622
Query: 440 KPMEKQLEQLEILYPEKARGVAKF---------NIPLAHMIIAGADFILIPSRFEPCGLI 490
K K++ L Y K G ++ N L I + P+ +E GL
Sbjct: 623 KAEMKKMYDLIEEY--KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLT 680
Query: 491 QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550
+ AM G GG + + G +GF +DP + T+
Sbjct: 681 VVEAMTCGLPTFATCKGGPAEIIVHGKSGF----------HIDPYHGDQAADTLADFFTK 730
Query: 551 YGT--QALAEMMKNGM---AQDLSWKGPAKKWEE 579
E+ K G+ + +W+ +++
Sbjct: 731 CKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 5e-18
Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 52/232 (22%)
Query: 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 364
+++ + + D + P Y Q + + + +D
Sbjct: 166 WEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVI-------------MPPSIDPLSEKN-- 210
Query: 365 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 424
++ K + + ++ P+I + R + KG +
Sbjct: 211 -------------VELKQTEILRILERFDVDPEK--PIITQVSRFDPWKGIFDVIEIYRK 255
Query: 425 FIKE--NVQIIVLGTG-------KKPMEKQLEQLEILYPEKARGVAK------FNIPLAH 469
++ VQ++++G EK L ++ + V + +
Sbjct: 256 VKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG-----EDYDVKVLTNLIGVHAREVN 310
Query: 470 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 520
+D IL S E GL AM G P++ GG+ + +G TGF
Sbjct: 311 AFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGRAVGGIKFQIVDGETGF 361
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 9e-15
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 40/190 (21%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKAR- 458
I +GR +K +L A+ + ++ +++ G G P EK+++ L A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG--PDEKKIKLL-------AQK 53
Query: 459 -GVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST--GG 508
GV + I+ + + E + L A+ G VP++A++
Sbjct: 54 LGVKAEFGFVNSNELLE---ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 509 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQ 566
+ + +P + +S + L M A
Sbjct: 111 TRQFALDERSL------------FEPNNAKDLSAKIDWWLEN--KLERERMQNEYAKSAL 156
Query: 567 DLSWKGPAKK 576
+ + + +
Sbjct: 157 NYTLENSVIQ 166
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 75.6 bits (185), Expect = 2e-14
Identities = 31/249 (12%), Positives = 72/249 (28%), Gaps = 45/249 (18%)
Query: 183 KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242
I P + ++ + L + + +V ++W +
Sbjct: 147 GIPSPENDFET-NDAILLGYTVAWFLG--------EVAHLDSQHAIVAHFHEWLAGVALP 197
Query: 243 YLKTMYKPKGMYKSAKVVFCIH------NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 296
+ +F H + G F F + L + D
Sbjct: 198 LCRKRRID------VVTIFTTHATLLGRYLCASGSFDFYN----CLES-----VDVDHEA 242
Query: 297 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 356
+ + +A +D+ TVS A E ++++++ + NG++
Sbjct: 243 GRFGIYHRYCIERAAAHSADVFTTVSQITAF----------EAEHLLKRKPDGILPNGLN 292
Query: 357 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGS 415
V ++ + + D ++ +D + GR E + KG+
Sbjct: 293 VIKFQAFHEFQNLHALKKEKINDF---VRGHFHGCFDFDLDNTLYFF-IAGRYEYKNKGA 348
Query: 416 DILAAAIPH 424
D+ A+
Sbjct: 349 DMFIEALAR 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 30/318 (9%)
Query: 284 AQFKSSFDFI--DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 341
F FDF + + GR K G DM + L K +
Sbjct: 319 GHFHGCFDFDLDNTLYFFIAGRYEYKNK-GA---DMFIEALARLNYRLKVSGSKKTVVAF 374
Query: 342 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL---LKEALQAEVG-LPVD 397
I+ ++ + ++ +T + + ++ LP D
Sbjct: 375 IVMPAKNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432
Query: 398 RNI------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI 451
V+ L ++ L + H + ++ ++L ++ +
Sbjct: 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492
Query: 452 ---LYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 508
+PE + G + PS +EP G G I + G
Sbjct: 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552
Query: 509 LVDTVEEGFTGFQM---GSFSVDCEAVDPVDVA-AVSTTVRRALATYGTQALAEMMKNG- 563
+E+ Q G + VD P + + + + Q +N
Sbjct: 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ--RINQRNAT 610
Query: 564 --MAQDLSWKGPAKKWEE 579
++ L WK ++ +
Sbjct: 611 EALSDLLDWKRMGLEYVK 628
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-14
Identities = 49/286 (17%), Positives = 82/286 (28%), Gaps = 91/286 (31%)
Query: 307 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 366
++ + + VS + + I NG+DV +
Sbjct: 153 ILRPYHEKIIGRIAVSDLARRWQMEALGSDAVE-----------IPNGVDVASFAD---- 197
Query: 367 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHF 425
A + R + F+GR E +KG +L AA+P
Sbjct: 198 -----------------------APLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234
Query: 426 IKE--NVQIIVLGTGKKPMEKQLEQLEIL-----------YPEKARGVAKFNIPLAHMII 472
+ +V+I+++G G ++ EQ L KA +
Sbjct: 235 VARFPDVEILIVGRG--DEDELREQAGDLAGHLRFLGQVDDATKAS------------AM 280
Query: 473 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 530
AD P E G++ + AM GT +VAS + +G G
Sbjct: 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVLADGDAGR---------- 329
Query: 531 AVDPVDVAAVSTTVRRAL------ATYGTQALAEMMKNGMAQDLSW 570
V D ++ + L A Y +A W
Sbjct: 330 LVPVDDADGMAAALIGILEDDQLRAGYVARASER------VHRYDW 369
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 9e-11
Identities = 19/224 (8%), Positives = 68/224 (30%), Gaps = 25/224 (11%)
Query: 363 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAA 421
L + Y+ + +P + L+ + + +I GR ++ ++ A
Sbjct: 205 LKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNAFTLIVEA 263
Query: 422 IPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM--IIAGAD 476
+ F++ + + ++ G+K + L + + + L ++ +
Sbjct: 264 LKIFVQKYDRSNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSS 316
Query: 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 536
+ L +G ++ + D ++ ++
Sbjct: 317 IGISLMISPHPSYPPLEMAHFGL-RVITNKYENKDLSNWHSNIVS----------LEQLN 365
Query: 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 580
++ T+ ++ + + + + M ++ +E
Sbjct: 366 PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEI 409
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 2e-10
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 392 VGLPVDRNI-------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK 444
PV+ + + R+ +K ++ ++ ++ ++G
Sbjct: 8 HSHPVETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWF--SKGD 63
Query: 445 QLEQLEILYPEKARGVAKF--NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTV 500
E+ + A KF ++ +I + +L ++ E GL + AM G
Sbjct: 64 HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK- 122
Query: 501 PIVAS-TGGLVDTVEEGFTGF 520
P++A GG +TV TG+
Sbjct: 123 PVIAVNEGGFKETVINEKTGY 143
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 8e-10
Identities = 57/410 (13%), Positives = 106/410 (25%), Gaps = 61/410 (14%)
Query: 220 KYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGL 279
S ++V+ + ++++ + ++ F GL
Sbjct: 25 PRISKAHEVIVFGIHA-------FGRSVHANIEEFD----AQTAEHVRGLNEQGFYYSGL 73
Query: 280 LNLPAQFKSSFDFIDGYNKP-VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 338
K D + YN P V G + M + +VL V
Sbjct: 74 SEFIDVHK--PDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------- 122
Query: 339 LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVD 397
+N+ +V M + + G K + V + VGL
Sbjct: 123 -ENLWWIFSHPKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEY 181
Query: 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPE 455
+ + + R +K DI A FI + + ++ L + L + +
Sbjct: 182 NDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELV 241
Query: 456 KARGVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPI 502
+ F MI D I+ S E GL G I
Sbjct: 242 ASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLI 301
Query: 503 VASTGGLVDTVEEGF----------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552
+++ GG D + +D D+ A +
Sbjct: 302 ISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVE-------AFTFFK 354
Query: 553 TQALAEMM-KNG---MAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEI 598
+ + K + +W + + +L S EE
Sbjct: 355 DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVESRETPGNEEH 404
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 1e-09
Identities = 51/368 (13%), Positives = 106/368 (28%), Gaps = 98/368 (26%)
Query: 41 RSLNIIDDLQ----VKTMASK---LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTE 93
L ++ ++Q L T+R + + + + ++ E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 94 V----APW--SKTGGL-GDVLGGLPPALAANGHRVMTIAPRYDQYK--DAWDTDVVIELK 144
V + + L +VL P L+ + +D +K + +IE
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWF----LAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
+ + +E + R VF L+ +W D +
Sbjct: 363 L-NVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFD-----------VIKSDVMVVV 408
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYDVVF-----VANDW--HTSLIPCY-LKTMYKPKG 252
+ L + +L + + + + N++ H S++ Y + +
Sbjct: 409 NKLHKYSL-----VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 253 M-------YKSAKVVFCIHNIAY-------QGRFA-----FEDF---------------- 277
+ Y F H I + R F DF
Sbjct: 464 LIPPYLDQY------FYSH-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 278 --GLLNLPAQFKSSFDFI-DGYNKPVRGRKINWMKAGILESDMVLTVSPH--YAQELVSG 332
+LN Q K +I D N P R +N + + + + L S + + +
Sbjct: 517 SGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Query: 333 EDKGVELD 340
ED+ + +
Sbjct: 575 EDEAIFEE 582
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 18/170 (10%)
Query: 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 460
+ F+GR+ KG+ AA ++++ G + +++ Y +
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPA--WEPEYFDEITRRYGSTVEPI 217
Query: 461 AKFNIPLAHMIIAGADFILIPSRF----------EPCGLIQLHAMRYGTVPIVAS-TGGL 509
+ ++A A +L S+ EP + A GT P+V + G L
Sbjct: 218 GEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCL 276
Query: 510 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR-ALATYGTQALAE 558
+ V G+ EA + S VRR A+ +G +AE
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAE 326
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 609 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.96 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.94 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.9 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.86 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.84 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.82 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.79 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.68 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.68 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.65 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.59 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.58 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.55 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.48 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.47 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.47 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.27 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.19 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 99.12 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.03 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.94 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.89 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.77 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.74 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.15 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.58 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.04 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 96.27 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 95.66 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 95.46 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.14 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 94.91 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 94.65 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 94.5 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 91.98 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 87.9 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 85.58 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 85.52 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-81 Score=695.79 Aligned_cols=526 Identities=70% Similarity=1.177 Sum_probs=449.9
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
..||||||++|++|+.|+||++++++.|+++|+++||+|+||+|.|+++.+.++......+.+.++...+++++...+||
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 47999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCC---CCCceEEEecccccch
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS---GPYDVVFVANDWHTSL 239 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~pDvV~h~h~~~~~~ 239 (609)
+++++++|.++.+.+++++..+|++..|.+|.|+..||.+||++++++++.+.+....++. +++||+ |+|||++++
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi-H~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF-VCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE-EEESGGGST
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE-EECcchHHH
Confidence 9999999999999999999999999999999999999999999999999888766554433 234555 999999999
Q ss_pred HHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEE
Q 007300 240 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 319 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 319 (609)
+|.+++..++..+.+.++|+|+|+||+.+||.++...+..++++..+....++...+..+.....+++++.++..||.|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999888888889999999999999999999999988888877766666666666667778999999999999999
Q ss_pred eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 320 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 320 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
|||+.+++++.+...+|.+++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|...+..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766677777766777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.|+|+|+||+.++||++.|++|++++.+++.+|+|+|.|+...+..++.+...+++++.+.+.++.++.+.+|++||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999998999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
+||++|+||++++|||+||+|||+|++||+.|+|.++.|||+++..+.++.+|++.|+++|+++|+++++.++.+.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888899999999999999999999987667789999
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHcCCCCCCCCCCcccchhhhcCCC
Q 007300 560 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609 (609)
Q Consensus 560 ~~~~~~~~fs~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (609)
.+++|.++|||+.+|++|+++|+++...++.|+.++++++|+++|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888999999999999999999998
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=436.73 Aligned_cols=464 Identities=32% Similarity=0.568 Sum_probs=349.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEE-EE-EeCCEEeeEEEEEeeEcCe
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-EL-KVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~gv 162 (609)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....+...... .. ..++ ...+.+...+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999888656799999999999999999999999998754322211111000 00 0000 122333345799
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++++..+.++.+ .+ .+|+...+.+|.++..++..+...+.++++.+.. ..+|||| |+|+|..++++.
T Consensus 78 ~v~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Div-h~~~~~~~~~~~ 145 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----PG-SPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP------FWRPDVV-HAHDWHAGLAPA 145 (485)
T ss_dssp EEEEEECHHHHCC----SS-CSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST------TCCCSEE-EEETGGGTTHHH
T ss_pred EEEEEeChhhccC----CC-CccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc------CCCCCEE-EeeccchhHHHH
Confidence 9999976654432 00 1454444455777878887777777777665431 0159999 999998888777
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+++... .++|+|+++|+..+++.+....+..++++..+.... .. .......+++..++.+|.++++|
T Consensus 146 ~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~ad~vi~~S 212 (485)
T 2qzs_A 146 YLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIH----GL---EFNGQISFLKAGLYYADHITAVS 212 (485)
T ss_dssp HHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTT----TT---EETTEEEHHHHHHHHCSEEEESS
T ss_pred HHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccc----cc---cccccccHHHHHHHhcCeEEecC
Confidence 765211 589999999998766555443333334333221100 00 00112356778889999999999
Q ss_pred HHHHHHHhcccCCCccchhhh--cc--CCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 323 PHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+.+++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|..+..+..+|+.+++ .++...+..+++++|++.++
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~ 290 (485)
T 2qzs_A 213 PTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLKVDD 290 (485)
T ss_dssp HHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCCCCT
T ss_pred HHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCCCCC
Confidence 9999998751 1232211111 11 38999999999999998877777777877765 56677788999999998755
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
+.++|+|+||+.++||++.+++|++.+.+++++|+|+|+|++.+.+.++++..++++++.++.+++.+.+..+|+.||++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~ 370 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVI 370 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEE
Confidence 67899999999999999999999999977799999999998778889999998887778767777878778899999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---------cceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
|+||++|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ +++|+++++++|.++++
T Consensus 371 v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~ 440 (485)
T 2qzs_A 371 LVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRAFV 440 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHHHHH
T ss_pred EECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 899987 99999999999999994
Q ss_pred hh-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 550 TY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 550 ~~-~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
.+ +++.+.++++++..++|||+.++++|+++|+++....
T Consensus 441 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 441 LWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHTSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---
T ss_pred HcCCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhhh
Confidence 21 2678888998888899999999999999999987543
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-50 Score=438.37 Aligned_cols=466 Identities=35% Similarity=0.564 Sum_probs=351.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCc-eEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-VVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....++.. ...+..+... ...+..+...+|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 899999999888545799999999999999999999999998764322211110 0001000000 11233344568999
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhh-ccCCCCCCCCCCceEEEecccccchHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++++.+.++.+ . ..+|+...+.+|.++..++..++..+.++++.+ ... +|||| |+|+|..++++.
T Consensus 80 v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~DiI-h~~~~~~~~~~~ 146 (485)
T 1rzu_A 80 LLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGW-------RPDMV-HAHDWQAAMTPV 146 (485)
T ss_dssp EEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSC-------CCSEE-EEEHHHHTTHHH
T ss_pred EEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhccCC-------CCCEE-EecccchhHHHH
Confidence 999877654432 0 125554445567788888888887777776654 222 59999 999988887777
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+++... ..++|+|+++|+..+++.+....+..++++..+...- .. .......+++..++.+|.++++|
T Consensus 147 ~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~ad~vi~~S 214 (485)
T 1rzu_A 147 YMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME----GI---EYYNDVSFLKGGLQTATALSTVS 214 (485)
T ss_dssp HHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTT----TT---EETTEEEHHHHHHHHCSEEEESC
T ss_pred HHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccc----cc---cccccccHHHHHHhhcCEEEecC
Confidence 766531 1489999999998776655544444444443322100 00 00012356788899999999999
Q ss_pred HHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCC
Q 007300 323 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 400 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 400 (609)
+.+++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..++ .++...+..+++++|++.++ .
T Consensus 215 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~-~ 291 (485)
T 1rzu_A 215 PSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDDG-S 291 (485)
T ss_dssp HHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCSS-S
T ss_pred HhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCCC-C
Confidence 9999998751 1231111111 1238999999999999998877767777777664 56777788999999998542 3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
++|+|+||+.++||++.|++|++.+.+++++|+|+|+|++.+.+.++++..++++++.++.+++.+.+..+|+.||++|+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEE
Confidence 69999999999999999999999997779999999999877888999999888777886777788887889999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---------cceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.++++.+
T Consensus 372 pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 899987 9999999999999999421
Q ss_pred -CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007300 552 -GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 589 (609)
Q Consensus 552 -~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~~ 589 (609)
+++.+.++++++..+.|||+.++++|+++|++++....
T Consensus 442 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCC
Confidence 27788889988888999999999999999999986543
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=407.37 Aligned_cols=423 Identities=24% Similarity=0.341 Sum_probs=325.6
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
++|||++|+.+++| ...||++.++.+|+++|+++||+|+|+++.++...+.. .....+ -+.....+.++...+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE--IGKIRV--FGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE--EEEEEE--TTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh--hccccc--cCcccceeeeeccCCCc
Confidence 36999999999888 56899999999999999999999999999876554421 111122 33455666777788999
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcch-HHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIP 241 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~ 241 (609)
+++.++. .++.+ ..+|+. |.++ ..++..+...+.+.++.+-.. ..+|||| |+|+|...+++
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Dii-~~~~~~~~~~~ 137 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLRE-----EPLPDVV-HFHDWHTVFAG 137 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTTT-----SCCCSEE-EEESGGGHHHH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhcc-----CCCCeEE-EecchhhhhhH
Confidence 9999987 44443 234431 4566 777888888888887776100 1259999 99999888888
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEee
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 321 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 321 (609)
.+++.. .++|+|+++|+....+. +...+....+ .+........+++..++.+|.++++
T Consensus 138 ~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ad~ii~~ 195 (439)
T 3fro_A 138 ALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGL--------------SELAPYPDIDPEHTGGYIADIVTTV 195 (439)
T ss_dssp HHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTC--------------GGGCCSSEECHHHHHHHHCSEEEES
T ss_pred HHHhhc-------cCCCEEEEecccccccC-chHHhCcccc--------------ccccccceeeHhhhhhhhccEEEec
Confidence 877754 59999999998764221 1100000000 0000112336778889999999999
Q ss_pred CHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCc
Q 007300 322 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 401 (609)
Q Consensus 322 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 401 (609)
|+.+++.... .++... .++.+||||+|.+.|.|... ...+...+..+++++|++. + +
T Consensus 196 S~~~~~~~~~--~~~~~~------~~i~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~--~-~ 252 (439)
T 3fro_A 196 SRGYLIDEWG--FFRNFE------GKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMDE--G-V 252 (439)
T ss_dssp CHHHHHHTHH--HHGGGT------TSEEECCCCCCTTTSCGGGS------------CSCHHHHHHHHHHHHTCCS--C-E
T ss_pred CHHHHHHHhh--hhhhcC------CceeecCCCCCchhcCcccc------------cchhhhhHHHHHHHcCCCC--C-c
Confidence 9999988442 122232 39999999999998877521 1123456788999999863 3 8
Q ss_pred EEEEEeccc-cccCHHHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee-cChHHHHHHHHhC
Q 007300 402 VIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK-FNIPLAHMIIAGA 475 (609)
Q Consensus 402 ~i~~iGrl~-~~Kg~~~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~-~~~~~~~~~l~~a 475 (609)
+|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|+..+.+.++++..++++ +..+.+ .+.+++..+|+.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~-~~~~~g~~~~~~~~~~~~~a 331 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGN-VKVITEMLSREFVRELYGSV 331 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTT-EEEECSCCCHHHHHHHHTTC
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCC-EEEEcCCCCHHHHHHHHHHC
Confidence 999999999 99999999999999977 6899999999997778999999999884 544444 6888898999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH-hhCHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQ 554 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~~ 554 (609)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ +++|+++++++|.++++ + ++
T Consensus 332 dv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~--~~ 398 (439)
T 3fro_A 332 DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS--RS 398 (439)
T ss_dssp SEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--TT
T ss_pred CEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--HH
Confidence 99999999999999999999999999999999999999887 99987 99999999999999999 6 34
Q ss_pred HHHHHHHHHHH--hhCCchHHHHHHHHHHHHHHHc
Q 007300 555 ALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 555 ~~~~~~~~~~~--~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+.++++++.. ++|||+.++++|+++|++++..
T Consensus 399 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 399 DLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 44445544432 7799999999999999998754
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=362.07 Aligned_cols=402 Identities=18% Similarity=0.244 Sum_probs=282.9
Q ss_pred CccccccCCCceEEEEEeecCCcc-----ccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEE
Q 007300 75 PSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKI 149 (609)
Q Consensus 75 ~~~~~~~~~~MkIl~vs~~~~P~~-----~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~ 149 (609)
+++...+++.|||++|+..|+|.. ..||.+.++.+|+++|+++||+|+|+++........
T Consensus 11 ~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--------------- 75 (438)
T 3c48_A 11 SSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE--------------- 75 (438)
T ss_dssp --------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS---------------
T ss_pred ccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc---------------
Confidence 344445566799999999888731 369999999999999999999999999874321110
Q ss_pred eeEEEEEeeEcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHh-hhhhccCCCCCCCCCCce
Q 007300 150 EKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYDV 228 (609)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~pDv 228 (609)
.....+|++++.+....+... . ..+....+..+...+++. ++... +||+
T Consensus 76 -----~~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~Di 125 (438)
T 3c48_A 76 -----IVRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREKV---------TYDL 125 (438)
T ss_dssp -----EEEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHTC---------CCSE
T ss_pred -----cccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhccC---------CCCE
Confidence 011235677776643221100 0 000011112233333333 22221 3999
Q ss_pred EEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHH
Q 007300 229 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 308 (609)
Q Consensus 229 V~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (609)
| |+|.|...+++.++... .++|+|+++|+........ + ...... . ......+.
T Consensus 126 v-~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~---~---~~~~~~-~------------~~~~~~~~ 178 (438)
T 3c48_A 126 I-HSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY---R---DDSDTP-E------------SEARRICE 178 (438)
T ss_dssp E-EEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-H------------HHHHHHHH
T ss_pred E-EeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc---c---cccCCc-c------------hHHHHHHH
Confidence 9 99987766666555544 4899999999754311000 0 000000 0 00112345
Q ss_pred HHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 309 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 309 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
+..++.+|.++++|+..++.+.+. +|++.+ ++.+||||+|...|.+.... .+..+
T Consensus 179 ~~~~~~~d~ii~~s~~~~~~~~~~--~g~~~~------k~~vi~ngvd~~~~~~~~~~-----------------~~~~~ 233 (438)
T 3c48_A 179 QQLVDNADVLAVNTQEEMQDLMHH--YDADPD------RISVVSPGADVELYSPGNDR-----------------ATERS 233 (438)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHH--HCCCGG------GEEECCCCCCTTTSCCC---------------------CHHH
T ss_pred HHHHhcCCEEEEcCHHHHHHHHHH--hCCChh------heEEecCCccccccCCcccc-----------------hhhhh
Confidence 667889999999999999998752 455544 89999999999888765311 12347
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C--CeEEEEEeC----CChhhHHHHHHHHHhCC--CceE
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP--EKAR 458 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~--~~v~ 458 (609)
++++|++. +.++|+|+||+.+.||++.+++|+..+.+ + +++|+|+|+ |. ..+.++++..+++ +++.
T Consensus 234 r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~~~v~ 309 (438)
T 3c48_A 234 RRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVEKRIR 309 (438)
T ss_dssp HHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCTTTEE
T ss_pred HHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCCCcEE
Confidence 88888864 44899999999999999999999999975 3 799999998 54 5667777776654 5688
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHH
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
+.+..+.+++..+|+.||++|+||..|+||++++|||++|+|||+++.||..|++.++.+|+++ ++.|++
T Consensus 310 ~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~ 379 (438)
T 3c48_A 310 FLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------DGHSPH 379 (438)
T ss_dssp EECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------SSCCHH
T ss_pred EcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------CCCCHH
Confidence 8887788888899999999999999999999999999999999999999999999999999987 899999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCCC
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 590 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~~ 590 (609)
+++++|.+++++ ++.+.++++++ +.+ |||+.++++|+++|++++.....
T Consensus 380 ~la~~i~~l~~~--~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 380 AWADALATLLDD--DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhccc
Confidence 999999999997 66666666555 345 99999999999999999986543
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=364.92 Aligned_cols=412 Identities=16% Similarity=0.133 Sum_probs=288.3
Q ss_pred CceEEEEEeecCCc---------cccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc-ccCCCceEEEEEeCCEEeeEE
Q 007300 84 GLNILFVGTEVAPW---------SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (609)
Q Consensus 84 ~MkIl~vs~~~~P~---------~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (609)
.|||++|+..++|. ...||.+.++.+|+++|+++||+|+|+++...... ..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------------- 71 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE--------------- 71 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS---------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh---------------
Confidence 49999999988773 14699999999999999999999999998643211 100000
Q ss_pred EEEee--EcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEE
Q 007300 154 FFHCH--KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFV 231 (609)
Q Consensus 154 ~~~~~--~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h 231 (609)
.... ..|++++.+....... .. ...-...+..+...+.+.++.... +|||| |
T Consensus 72 -~~~~~~~~gv~v~~~~~~~~~~----------~~------~~~~~~~~~~~~~~l~~~l~~~~~--------~~Div-h 125 (499)
T 2r60_A 72 -IDYYQETNKVRIVRIPFGGDKF----------LP------KEELWPYLHEYVNKIINFYREEGK--------FPQVV-T 125 (499)
T ss_dssp -EEECTTCSSEEEEEECCSCSSC----------CC------GGGCGGGHHHHHHHHHHHHHHHTC--------CCSEE-E
T ss_pred -HHhccCCCCeEEEEecCCCcCC----------cC------HHHHHHHHHHHHHHHHHHHHhcCC--------CCCEE-E
Confidence 0001 2467777664321100 00 000000111223334444444211 49999 9
Q ss_pred ecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCc-cccccccccccCCCCCcCCchhHHHHH
Q 007300 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKA 310 (609)
Q Consensus 232 ~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~ 310 (609)
+|.+..++++.++... .++|+|+++|+..+..... +...+.. ..+...+. ......+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 186 (499)
T 2r60_A 126 THYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIAERL 186 (499)
T ss_dssp EEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHHHHH
T ss_pred EcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHHHHH
Confidence 9987666666555544 4899999999864311100 0000000 00000000 0011234477
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCC-c----cchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.++.+|.++++|+..++.+.+...+| + +.+ ++.+||||+|...|.+... ...+
T Consensus 187 ~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~~~~ 244 (499)
T 2r60_A 187 TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------DKIK 244 (499)
T ss_dssp HHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------HHHH
T ss_pred HHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------hhhH
Confidence 78899999999999999987520134 3 333 8999999999998876531 1234
Q ss_pred HHHHHHhC-----CCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C-CeEEEEEeC--CC----h-------hhHH
Q 007300 386 EALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK----K-------PMEK 444 (609)
Q Consensus 386 ~~~~~~~g-----l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~-~~~lvivG~--g~----~-------~~~~ 444 (609)
..+++++| ++. +.++|+|+||+.+.||++.+++|+..+.+ + .++|+|+|+ |+ . .+.+
T Consensus 245 ~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~ 322 (499)
T 2r60_A 245 AKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILG 322 (499)
T ss_dssp HHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHH
T ss_pred HHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHH
Confidence 66788877 654 44899999999999999999999999965 2 468999998 32 0 1267
Q ss_pred HHHHHHHhCC--CceEEEeecChHHHHHHHHhC----cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcc
Q 007300 445 QLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 518 (609)
Q Consensus 445 ~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~ 518 (609)
.++++..+++ ++|.+.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+
T Consensus 323 ~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~ 402 (499)
T 2r60_A 323 KIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKY 402 (499)
T ss_dssp HHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTS
T ss_pred HHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCce
Confidence 7888877654 568888888888899999999 9999999999999999999999999999999999999999999
Q ss_pred eeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCCCC
Q 007300 519 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSEP 591 (609)
Q Consensus 519 G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~~~ 591 (609)
|+++ +++|+++++++|.+++++ ++.+.++++++ +.+.|||+.++++|+++|++++......
T Consensus 403 g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~~ 466 (499)
T 2r60_A 403 GVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEE 466 (499)
T ss_dssp SEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC----
T ss_pred EEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhhh
Confidence 9987 999999999999999997 66666666555 4567999999999999999999875443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=350.07 Aligned_cols=368 Identities=21% Similarity=0.278 Sum_probs=279.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc-ccCCCceEEEEEeCCEEeeEEEEEeeEc
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (609)
|+.|||++|+..|+|. .||.+.++.+|+++| +||+|+|+++...... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 4579999999998886 899999999999999 6999999998754321 1000 112
Q ss_pred CeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccc-h
Q 007300 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTS-L 239 (609)
Q Consensus 161 gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~-~ 239 (609)
|++++.+....++.. ..+...+.+.++.. +||+| |+|..... .
T Consensus 57 ~~~~~~~~~~~~~~~-------------------------~~~~~~l~~~~~~~----------~~Dvv-~~~~~~~~~~ 100 (394)
T 3okp_A 57 DYEVIRWPRSVMLPT-------------------------PTTAHAMAEIIRER----------EIDNV-WFGAAAPLAL 100 (394)
T ss_dssp SSEEEEESSSSCCSC-------------------------HHHHHHHHHHHHHT----------TCSEE-EESSCTTGGG
T ss_pred ceEEEEccccccccc-------------------------hhhHHHHHHHHHhc----------CCCEE-EECCcchHHH
Confidence 444444432111110 12233344444444 59999 88865443 3
Q ss_pred HHHHHHHhhcCCCcccCce-EEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEE
Q 007300 240 IPCYLKTMYKPKGMYKSAK-VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 318 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~-~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 318 (609)
+..+++. .++| +|+++|+...... .......+++..++.+|.+
T Consensus 101 ~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~d~i 144 (394)
T 3okp_A 101 MAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEVDVL 144 (394)
T ss_dssp GHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhCCEE
Confidence 3444443 3564 8899996432000 0012335567788999999
Q ss_pred EeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 319 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 319 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..+++++|++.+
T Consensus 145 i~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~~~- 197 (394)
T 3okp_A 145 TYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFTDT- 197 (394)
T ss_dssp EESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCCTT-
T ss_pred EEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCCcC-
Confidence 99999999999862 221 12899999999999887742 2336788999998754
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
.++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++.....+++.+.+..+.+++..+|+.||
T Consensus 198 -~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 274 (394)
T 3okp_A 198 -TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD 274 (394)
T ss_dssp -CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS
T ss_pred -ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC
Confidence 4899999999999999999999999866 689999999987 66777777755556798888888889999999999
Q ss_pred EEEecCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 477 FILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 477 v~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
++|+||.+ |+||++++|||++|+|||+++.||..|++.++ +|+++ +++|+++++++|.++++
T Consensus 275 ~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIELLD 343 (394)
T ss_dssp EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHHHHT
T ss_pred EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999 99999999999999999999999999999999 99987 99999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCC
Q 007300 550 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGS 589 (609)
Q Consensus 550 ~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~ 589 (609)
+ ++.+.++++++ +.++|||+.++++|+++|+++.....
T Consensus 344 ~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~ 384 (394)
T 3okp_A 344 D--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLA 384 (394)
T ss_dssp C--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcc
Confidence 7 66666666555 46789999999999999999876543
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=368.79 Aligned_cols=424 Identities=14% Similarity=0.168 Sum_probs=280.8
Q ss_pred CceEEEEEeecC---------CccccchHHHHhhc--------hhHHHHhCCCeEE----EEeecCCCccccCCCceEEE
Q 007300 84 GLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (609)
Q Consensus 84 ~MkIl~vs~~~~---------P~~~~GG~~~~~~~--------La~aL~~~Gh~V~----vit~~~~~~~~~~~~~~~~~ 142 (609)
.|+|++||...+ |. +||...++.+ |+++|+++||+|+ |+|...+.. ...+.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 689999999876 76 9999999985 7777788999886 998775432 1111111111
Q ss_pred EEeCCEEeeEEEEEeeEcCeeEEEEeCcc-------hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHH-HHHHHhhhhh
Q 007300 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW-------FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRIL 214 (609)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~v~~~~-------~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~-~~~~~~~~~~ 214 (609)
. +. ..+|+.++++.... ++.+ ..++ ... ..|. ..+...++..
T Consensus 355 ~-i~-----------~~~gv~I~RvP~~~~~g~l~~~l~k------~~L~---------~~L---~~F~~~~l~~il~~~ 404 (816)
T 3s28_A 355 R-VY-----------DSEYCDILRVPFRTEKGIVRKWISR------FEVW---------PYL---ETYTEDAAVELSKEL 404 (816)
T ss_dssp E-CT-----------TCSSEEEEEECEEETTEEECSCCCT------TTCG---------GGH---HHHHHHHHHHHHHHC
T ss_pred e-ec-----------CcCCeEEEEecCCCccccccccccH------HHHH---------HHH---HHHHHHHHHHHHHhc
Confidence 0 00 12366666664221 1111 1111 111 2233 2333333332
Q ss_pred ccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCcc-ccccccccc
Q 007300 215 NLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFI 293 (609)
Q Consensus 215 ~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 293 (609)
. ++|||| |+|.|.+++++.+++.. .++|+|+|.|+........ . +... .....+.
T Consensus 405 ~--------~~PDVI-HsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~~~-~-----~~~~~~~~~~y~-- 460 (816)
T 3s28_A 405 N--------GKPDLI-IGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKYPD-S-----DIYWKKLDDKYH-- 460 (816)
T ss_dssp S--------SCCSEE-EEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHSTT-T-----TTTHHHHHHHHC--
T ss_pred C--------CCCeEE-EeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccccc-c-----cchhhhHHHHHH--
Confidence 2 259999 99999988888887766 4999999999864321110 0 0000 0000000
Q ss_pred cCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc-CCCcc----chhh--------hccCCeeEecCCCCCCCc
Q 007300 294 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LDNI--------IRKTGIKGIVNGMDVQEW 360 (609)
Q Consensus 294 ~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-~~g~~----~~~~--------~~~~~i~vI~nGvd~~~~ 360 (609)
....+...+..++.||.|+++|+..++.+.... .++.. +..+ ....++.+||||+|.+.|
T Consensus 461 -------~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 461 -------FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 533 (816)
T ss_dssp -------HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTS
T ss_pred -------HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHc
Confidence 001122345688999999999999998643311 01110 0000 001289999999999999
Q ss_pred CCCCccc--cccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEe
Q 007300 361 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 436 (609)
Q Consensus 361 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG 436 (609)
.|...+. +...++. .+....+....++.+|+..+++.++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~~---i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHSE---IEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHHH---HHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhcccc---ccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 0000000 00000001123455666445677999999999999999999999999976 689999999
Q ss_pred CCCh---------hhHHHHHHHHHhCC--CceEEEeec----ChHHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCc
Q 007300 437 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 500 (609)
Q Consensus 437 ~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~----~~~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~P 500 (609)
+|++ ...+.++++..+++ ++|.+.+.. +.+++..+++ ++|++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 25667777777765 467776633 3355666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhhCCchHH
Q 007300 501 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 573 (609)
Q Consensus 501 vI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll----~~~~~~~~~~~~~~~---~~~~fs~~~~ 573 (609)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.+.|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999987 9999999999998877 55 56666666665 4588999999
Q ss_pred HHHHHHHHHHHHH
Q 007300 574 AKKWEETLLNLEV 586 (609)
Q Consensus 574 a~~~~~~~~~l~~ 586 (609)
+++|+++|+.+..
T Consensus 759 a~~ll~lY~~~g~ 771 (816)
T 3s28_A 759 SQRLLTLTGVYGF 771 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999997753
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=336.17 Aligned_cols=371 Identities=18% Similarity=0.178 Sum_probs=263.5
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
.|+.-++...| |. .||.+.++.+|+++|+++||+|+++++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 36666677765 43 7999999999999999999999999986321100 0112333
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.+..+.+.. +. +.. .. ..+...+.+.++.. +|||| |+|.+.......+
T Consensus 67 ~~~~~~~~~~~----------~~------~~~--~~-~~~~~~l~~~l~~~----------~~Dvv-~~~~~~~~~~~~~ 116 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YPP--YD-LALASKMAEVAQRE----------NLDIL-HVHYAIPHAICAY 116 (394)
T ss_dssp EECCCCC--------------CC------SCC--HH-HHHHHHHHHHHHHH----------TCSEE-EECSSTTHHHHHH
T ss_pred EEecccccccc----------cc------ccc--cc-HHHHHHHHHHHHHc----------CCCEE-EEcchhHHHHHHH
Confidence 33332211100 00 000 01 11233344444444 59999 9986554333333
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+...... .++|+|+++|+..... .+. ......+++..++.+|.++++|+
T Consensus 117 ~~~~~~~----~~~p~v~~~h~~~~~~---------~~~------------------~~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 117 LAKQMIG----ERIKIVTTLHGTDITV---------LGS------------------DPSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HHHHHTT----TCSEEEEECCHHHHHT---------TTT------------------CTTTHHHHHHHHHHSSEEEESCH
T ss_pred HHHHhhc----CCCCEEEEEecCcccc---------cCC------------------CHHHHHHHHHHHhhCCEEEECCH
Confidence 3322110 2699999999743200 000 00123456778899999999999
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
..++.+.+. ++. . .++.+||||+|...|.+.. +..++++++++. +.++|
T Consensus 166 ~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~i 214 (394)
T 2jjm_A 166 SLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SEKIL 214 (394)
T ss_dssp HHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----CEE
T ss_pred HHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CCeEE
Confidence 999998862 222 1 2899999999998887653 345677888764 44899
Q ss_pred EEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 404 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+|+||+.+.||++.+++|+..+.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+ + .+++..+|+.||++++
T Consensus 215 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g-~-~~~~~~~~~~adv~v~ 290 (394)
T 2jjm_A 215 IHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLG-K-QDNVAELLAMSDLMLL 290 (394)
T ss_dssp EEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCB-S-CSCTHHHHHTCSEEEE
T ss_pred EEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeC-c-hhhHHHHHHhCCEEEe
Confidence 999999999999999999999876 579999999987 5667777777654 4566655 3 3556679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+++
T Consensus 291 ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~~~~ 358 (394)
T 2jjm_A 291 LSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHRNMG 358 (394)
T ss_dssp CCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHHHHH
T ss_pred ccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 999999999999999997 66666666
Q ss_pred HHH---HHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 561 KNG---MAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 561 ~~~---~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++ +.+.|||+.++++|+++|++++...
T Consensus 359 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 359 ERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 555 4589999999999999999998653
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=331.10 Aligned_cols=365 Identities=15% Similarity=0.114 Sum_probs=257.1
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeE
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (609)
..|++|||++++.. + ..||.+.++.+|+++|.++||+|++++...+..... . .
T Consensus 36 ~~~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~--~---------------------~ 88 (416)
T 2x6q_A 36 EKLKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFN--V---------------------T 88 (416)
T ss_dssp HTTTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHH--H---------------------H
T ss_pred hhhhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhh--h---------------------h
Confidence 34678999999986 3 269999999999999999999999998753210000 0 0
Q ss_pred cCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcch-HHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccc
Q 007300 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTS 238 (609)
Q Consensus 160 ~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~ 238 (609)
..+...+. +.+.+. +... ...+..+...+.+.++.. +|||| |+|++...
T Consensus 89 ----------~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~----------~~Dvv-~~~~~~~~ 138 (416)
T 2x6q_A 89 ----------KTFHNALQ---GNESLK------LTEEMKELYLNVNRENSKFIDLS----------SFDYV-LVHDPQPA 138 (416)
T ss_dssp ----------HHHHHHHT---TCCSCC------CCHHHHHHHHHHHHHHHHSSCGG----------GSSEE-EEESSTTG
T ss_pred ----------cccceeec---cccccc------ccHHHHHHHHHHHHHHHHHHhhc----------CCCEE-EEeccchh
Confidence 00000000 000000 1111 111122223333333332 59999 99987654
Q ss_pred hHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEE
Q 007300 239 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 318 (609)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 318 (609)
.+..+++ ..+|+|+++|+..... ....+.+++..+..+|.+
T Consensus 139 ~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~~ 179 (416)
T 2x6q_A 139 ALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDRY 179 (416)
T ss_dssp GGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCEE
Confidence 4332211 2489999999643210 001234556667788887
Q ss_pred E-eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCC
Q 007300 319 L-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 397 (609)
Q Consensus 319 i-~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 397 (609)
+ ++|+...+.+ + ..++.+||||+|...+.+... ....+..+++++|++.
T Consensus 180 i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~~- 229 (416)
T 2x6q_A 180 IFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVDP- 229 (416)
T ss_dssp EESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCCT-
T ss_pred EEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCCC-
Confidence 6 5555443321 1 128999999999876654321 1233667888999875
Q ss_pred CCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHhCC--CceEEEeec---ChHH
Q 007300 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKF---NIPL 467 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~---~~~~ 467 (609)
+.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+. ...+.++++..+++ +++.+.+.+ +.++
T Consensus 230 -~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~ 308 (416)
T 2x6q_A 230 -EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHARE 308 (416)
T ss_dssp -TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHH
T ss_pred -CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHH
Confidence 44899999999999999999999999966 6899999999962 34556666666543 468877644 3567
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
+..+|+.||++|+||.+|+||++++|||++|+|||+++.||+.|++.++.+|+++ + |+++++++|.++
T Consensus 309 ~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~l 376 (416)
T 2x6q_A 309 VNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLYL 376 (416)
T ss_dssp HHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999986 5 999999999999
Q ss_pred HHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007300 548 LATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 548 l~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 377 l~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 377 LKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 997 66666666655 4578999999999999998765
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=331.70 Aligned_cols=362 Identities=16% Similarity=0.165 Sum_probs=256.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++++..++| .||.+.++.+|+++|+++||+|+++++...... ..|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--------------------------~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC--------------------------PKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------CTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------CCCcEE
Confidence 899999998777 599999999999999999999999997632110 125555
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.+..+.+. +..++..+...+.+.++.. +||+| |+|.+.......+.
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~----------~~Dvv-~~~~~~~~~~~~~~ 98 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH----------PADRV-VGFNKMPGLDVYFA 98 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS----------CCSEE-EESSCCTTCSEEEC
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc----------CCCEE-EEecCCCCceeeec
Confidence 554322111 1112223334444444443 59999 88865432210000
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhh--cCCEEEeeC
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVLTVS 322 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~vi~vS 322 (609)
.. ...++.+.+.|+... .+... ......+.+..+. .+|.++++|
T Consensus 99 ~~-------~~~~~~~~~~~~~~~----------------~~~~~-----------~~~~~~~~~~~~~~~~~d~ii~~s 144 (374)
T 2iw1_A 99 AD-------VCYAEKVAQEKGFLY----------------RLTSR-----------YRHYAAFERATFEQGKSTKLMMLT 144 (374)
T ss_dssp CS-------CCHHHHHHHHCCHHH----------------HTSHH-----------HHHHHHHHHHHHSTTCCCEEEESC
T ss_pred cc-------cccceeeeecccchh----------------hhcHH-----------HHHHHHHHHHHhhccCCcEEEEcC
Confidence 00 012222222232110 00000 0001122333343 699999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+. +|++.+ ++.+||||+|.+.|.+... ...+..+++++|++.+ .++
T Consensus 145 ~~~~~~~~~~--~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~ 198 (374)
T 2iw1_A 145 DKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKEQ--QNL 198 (374)
T ss_dssp HHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCTT--CEE
T ss_pred HHHHHHHHHH--hCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCCC--CeE
Confidence 9999998852 455544 8999999999988866431 1235678899998754 489
Q ss_pred EEEEeccccccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcE
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. .+++..+|+.||+
T Consensus 199 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 273 (374)
T 2iw1_A 199 LLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAADL 273 (374)
T ss_dssp EEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHCSE
T ss_pred EEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHhcCE
Confidence 9999999999999999999999965 4899999999863 34555555443 46777664 3556789999999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCC-CCCHHHHHHHHHHHHHhhCHHHH
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGTQAL 556 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~-~~d~~~la~~I~~ll~~~~~~~~ 556 (609)
+++||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ ++.+
T Consensus 274 ~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~~~~ 341 (374)
T 2iw1_A 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--SPLR 341 (374)
T ss_dssp EEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--HHHH
T ss_pred EEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--hHHH
Confidence 999999999999999999999999999999999999999999987 6 88999999999999997 6677
Q ss_pred HHHHHHHH--HhhCCchHHHHHHHHHHHHHH
Q 007300 557 AEMMKNGM--AQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 557 ~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~ 585 (609)
.++++++. .++++|+..++++.++++..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 342 MAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 77777663 467899999999999998654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=324.65 Aligned_cols=316 Identities=16% Similarity=0.108 Sum_probs=246.2
Q ss_pred CCCceEEEEEee--------c---CCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEe
Q 007300 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (609)
Q Consensus 82 ~~~MkIl~vs~~--------~---~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (609)
|+.|||++|+.. + +| ...||.+.++.+|+++|.++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 556999999998 3 34 346999999999999999999999999987432111
Q ss_pred eEEEEEeeEcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEE
Q 007300 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVF 230 (609)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~ 230 (609)
++++++.. +. + . .+.+.++.. +||+|
T Consensus 63 ---------~~~~~~~~--~~---------------------~----~-------~l~~~l~~~----------~~Dvi- 88 (342)
T 2iuy_A 63 ---------PGLTVVPA--GE---------------------P----E-------EIERWLRTA----------DVDVV- 88 (342)
T ss_dssp ---------TTEEECSC--CS---------------------H----H-------HHHHHHHHC----------CCSEE-
T ss_pred ---------CcceeccC--Cc---------------------H----H-------HHHHHHHhc----------CCCEE-
Confidence 12221100 00 0 0 222333333 59999
Q ss_pred EecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHH
Q 007300 231 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 310 (609)
Q Consensus 231 h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 310 (609)
|+|.+...... .. ..++| |+++|+.....
T Consensus 89 ~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~---------------------------------------- 117 (342)
T 2iuy_A 89 HDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP---------------------------------------- 117 (342)
T ss_dssp EECSSSSSCST---TC-------CTTCE-EEEEECSSSBC----------------------------------------
T ss_pred EECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc----------------------------------------
Confidence 99976654332 11 15889 99999754310
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
..+|.++++|+..++.+.+ . .++.+||||+|.+.|.+...
T Consensus 118 --~~~d~ii~~S~~~~~~~~~-------~------~~~~vi~ngvd~~~~~~~~~------------------------- 157 (342)
T 2iuy_A 118 --VNPVGCTYSSRAQRAHCGG-------G------DDAPVIPIPVDPARYRSAAD------------------------- 157 (342)
T ss_dssp --SCCTTEEESCHHHHHHTTC-------C------TTSCBCCCCBCGGGSCCSTT-------------------------
T ss_pred --ccceEEEEcCHHHHHHHhc-------C------CceEEEcCCCChhhcCcccc-------------------------
Confidence 0199999999999998874 1 28899999999988876531
Q ss_pred HhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHH
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 470 (609)
.. .+.++|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+++..
T Consensus 158 --~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 158 --QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp --CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred --cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 01 1346899999999999999999999998 89999999997 66677777766667798888888888889
Q ss_pred HHHhCcEEEecCC----------CCCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEecccccccccCCCCCHH
Q 007300 471 IIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 471 ~l~~aDv~v~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
+|+.||++++||. .|+||++++|||++|+|||+|+.||+.|++.+ +.+|+++ ++ |++
T Consensus 228 ~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d~~ 296 (342)
T 2iuy_A 228 LLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-APD 296 (342)
T ss_dssp HHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-CHH
T ss_pred HHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-CHH
Confidence 9999999999999 79999999999999999999999999999999 9999976 88 999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++++|.++++ .+.+++.+.++|||+.++++|+++|++++...
T Consensus 297 ~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 297 EARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999876 33445556789999999999999999998654
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=327.66 Aligned_cols=363 Identities=18% Similarity=0.197 Sum_probs=261.8
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
+.|||++++..++|. .||.+.++..|+++|+++||+|+++++...... ...... ..|
T Consensus 19 ~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~------------------~~~- 75 (406)
T 2gek_A 19 SHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYVV------------------SGG- 75 (406)
T ss_dssp --CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTEE------------------ECC-
T ss_pred CcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCcccc------------------cCC-
Confidence 459999999876553 699999999999999999999999998744220 000000 001
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++.+....... ... +. ..+...+.+.++.. +||+| |+|.+.......
T Consensus 76 ~~~~~~~~~~~~--------~~~-------~~------~~~~~~l~~~l~~~----------~~Dii-~~~~~~~~~~~~ 123 (406)
T 2gek_A 76 KAVPIPYNGSVA--------RLR-------FG------PATHRKVKKWIAEG----------DFDVL-HIHEPNAPSLSM 123 (406)
T ss_dssp CCC---------------------------CC------HHHHHHHHHHHHHH----------CCSEE-EEECCCSSSHHH
T ss_pred cEEeccccCCcc--------ccc-------cc------HHHHHHHHHHHHhc----------CCCEE-EECCccchHHHH
Confidence 111110000000 000 00 01223334444443 49999 888776655544
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
.+... .++|+|+++|+...... ... ....+++..++.+|.++++|
T Consensus 124 ~~~~~-------~~~~~i~~~h~~~~~~~--------------~~~--------------~~~~~~~~~~~~~d~ii~~s 168 (406)
T 2gek_A 124 LALQA-------AEGPIVATFHTSTTKSL--------------TLS--------------VFQGILRPYHEKIIGRIAVS 168 (406)
T ss_dssp HHHHH-------EESSEEEEECCCCCSHH--------------HHH--------------HHHSTTHHHHTTCSEEEESS
T ss_pred HHHHh-------cCCCEEEEEcCcchhhh--------------hHH--------------HHHHHHHHHHhhCCEEEECC
Confidence 44433 48999999997432110 000 01122235678999999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+. ++. .++ +||||+|...+.+.... .+++. +.++
T Consensus 169 ~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~~--~~~~ 210 (406)
T 2gek_A 169 DLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYPR--EGRT 210 (406)
T ss_dssp HHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCSC--SSCE
T ss_pred HHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhccC--CCeE
Confidence 9999998752 222 278 99999998777554311 11221 4479
Q ss_pred EEEEecc-ccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 403 IGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 403 i~~iGrl-~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
|+|+||+ .+.||++.+++|+..+.+ ++++|+|+|+|+. +.++++..++.+++.+.+..+.+++..+|+.||++|
T Consensus 211 i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 287 (406)
T 2gek_A 211 VLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYC 287 (406)
T ss_dssp EEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEE
T ss_pred EEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEE
Confidence 9999999 999999999999999976 6899999999983 666666665556788888778888889999999999
Q ss_pred ecCC-CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007300 480 IPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 558 (609)
Q Consensus 480 ~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 558 (609)
+||. .|+||++++|||++|+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 288 ~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~ 355 (406)
T 2gek_A 288 APHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED--DQLRAG 355 (406)
T ss_dssp ECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--HHHHHH
T ss_pred ecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHH
Confidence 9996 899999999999999999999999999999999999987 999999999999999997 666666
Q ss_pred HHHHHH--HhhCCchHHHHHHHHHHHHHHHcC
Q 007300 559 MMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 559 ~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++++. .+.|||+.++++|+++|++++...
T Consensus 356 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 356 YVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp HHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 666552 348999999999999999998654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=327.79 Aligned_cols=357 Identities=15% Similarity=0.137 Sum_probs=255.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|++.+ |. .||.+.++..|+++|+++ |+|+|++........ .. ....
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~-~~------------------------~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV-HA------------------------NIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS-CS------------------------SSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc-cc------------------------cccc
Confidence 9999999875 53 699999999999999999 999999976321000 00 0000
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+ +.. ....+ ..+.+.. + ....+.+.++.. +||+| |+|.|.....+.+.
T Consensus 52 ~--~~~-~~~~~------~~~~~~~---~---------~~~~l~~~l~~~----------~~Div-~~~~~~~~~~~~~~ 99 (413)
T 3oy2_A 52 F--DAQ-TAEHV------RGLNEQG---F---------YYSGLSEFIDVH----------KPDIV-MIYNDPIVIGNYLL 99 (413)
T ss_dssp E--EHH-HHHHH------TTCCSTT---C---------CHHHHHHHHHHH----------CCSEE-EEEECHHHHHHHHH
T ss_pred C--Ccc-ccccc------ccccccc---c---------hHHHHHHHHHhc----------CCCEE-EEcchHHHHHHHHH
Confidence 0 000 00000 0010000 0 111122233333 59999 99965554433333
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCC--EEEeeC
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVLTVS 322 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~vi~vS 322 (609)
+ ..+ +....+++...|+..... ...++..++.+| .++++|
T Consensus 100 ~-~~~---~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~ii~~S 141 (413)
T 3oy2_A 100 A-MGK---CSHRTKIVLYVDLVSKNI----------------------------------RENLWWIFSHPKVVGVMAMS 141 (413)
T ss_dssp H-GGG---CCSCCEEEEEECCCSBSC----------------------------------CGGGGGGGGCTTEEEEEESS
T ss_pred H-hcc---CCCCCceeeeccccchhh----------------------------------HHHHHHHHhccCCceEEEcC
Confidence 2 211 101345666666432200 011245678888 999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+ +|. .. ++.+||||+|.+.|. ..+++++++.+.+.++
T Consensus 142 ~~~~~~~~~---~~~-~~------~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~~~~ 186 (413)
T 3oy2_A 142 KCWISDICN---YGC-KV------PINIVSHFVDTKTIY-------------------------DARKLVGLSEYNDDVL 186 (413)
T ss_dssp THHHHHHHH---TTC-CS------CEEECCCCCCCCCCT-------------------------THHHHTTCGGGTTSEE
T ss_pred HHHHHHHHH---cCC-CC------ceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccCceE
Confidence 999999987 554 22 899999999988772 1356677775445689
Q ss_pred EEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHhCC--Cc-------eEEEeecChHH
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFNIPL 467 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-------v~~~~~~~~~~ 467 (609)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+.. +++.++++..+++ ++ +.+.+..+.++
T Consensus 187 il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 187 FLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp EECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred EEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 9999999999999999999999865 68999999998743 4577777776654 33 44445567888
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcc---------------ee--Eecccccccc
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSVDCE 530 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~---------------G~--l~~~~~~~~~ 530 (609)
+..+|+.||++|+||.+|+||++++|||++|+|||+|+.||+.|++.++.+ |+ ++
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~-------- 338 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE-------- 338 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE--------
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee--------
Confidence 989999999999999999999999999999999999999999999999887 88 87
Q ss_pred cCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHcC
Q 007300 531 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 531 ~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
++.|+++++++| +++++ ++.+.++++++. .++|||+.++++|+++|++++...
T Consensus 339 --~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 339 --GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp --EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred --CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 889999999999 99987 666677766653 478999999999999999998754
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=319.78 Aligned_cols=343 Identities=16% Similarity=0.184 Sum_probs=238.5
Q ss_pred CcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCcc----
Q 007300 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY---- 268 (609)
Q Consensus 193 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~---- 268 (609)
+.+...+|.+++.++++.+..+... +|||+ |+|||++++++.+++..+ .++|+|||+|+..+
T Consensus 156 ~~dd~~~F~y~~~avl~~l~~~~~~-------~pdIi-H~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~l 221 (725)
T 3nb0_A 156 ETNDAILLGYTVAWFLGEVAHLDSQ-------HAIVA-HFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYL 221 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCS-------EEEEE-EEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCC-------CCcEE-EeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhh
Confidence 5568899999999999998776412 48998 999999999999999764 69999999999853
Q ss_pred --CCcccc-ccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhcc
Q 007300 269 --QGRFAF-EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 345 (609)
Q Consensus 269 --~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~ 345 (609)
||.++. ..+..++++..... .-.....++++.++..||.|+|||+.+++++... ++.+.+
T Consensus 222 agqg~~~~y~~L~~~~~d~ea~~----------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~L--l~r~~d----- 284 (725)
T 3nb0_A 222 CASGSFDFYNCLESVDVDHEAGR----------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEHL--LKRKPD----- 284 (725)
T ss_dssp TSSSCSCHHHHGGGCCHHHHHHH----------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--TSSCCS-----
T ss_pred hhcCCCchhhhhhhcCCChhhhh----------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHH--hcCCCC-----
Confidence 333221 11122222211000 0012356889999999999999999999999862 343332
Q ss_pred CCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHh------CCCCC-CCCcEEEEEeccc-cccCHHH
Q 007300 346 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDI 417 (609)
Q Consensus 346 ~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------gl~~~-~~~~~i~~iGrl~-~~Kg~~~ 417 (609)
.+ ||||+|+..|+|... ....+...|..+++.+ |++.+ ++.++|+.+||++ ++||+|.
T Consensus 285 -~i--IpNGID~~~f~p~~~-----------~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl 350 (725)
T 3nb0_A 285 -GI--LPNGLNVIKFQAFHE-----------FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM 350 (725)
T ss_dssp -EE--CCCCBCCCCCSSTTH-----------HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH
T ss_pred -EE--EcCCccccccCcchh-----------hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH
Confidence 33 999999999988521 1122344455555543 44443 3446666789999 7999999
Q ss_pred HHHHHhhccc---------CCeEEEEEeCCChhh--------------HHH-----------------------------
Q 007300 418 LAAAIPHFIK---------ENVQIIVLGTGKKPM--------------EKQ----------------------------- 445 (609)
Q Consensus 418 ll~a~~~l~~---------~~~~lvivG~g~~~~--------------~~~----------------------------- 445 (609)
+++|+.+|.. .-+.|+|+..+...+ .+.
T Consensus 351 ~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 430 (725)
T 3nb0_A 351 FIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELP 430 (725)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSC
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCC
Confidence 9999999863 136677876653110 000
Q ss_pred ------------------------------------------------HHHHHHhC--CC--ceEEEeecC-hH------
Q 007300 446 ------------------------------------------------LEQLEILY--PE--KARGVAKFN-IP------ 466 (609)
Q Consensus 446 ------------------------------------------------l~~l~~~~--~~--~v~~~~~~~-~~------ 466 (609)
++++.... .+ ++.++..|. ..
T Consensus 431 ~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~ 510 (725)
T 3nb0_A 431 TDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGL 510 (725)
T ss_dssp CCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCC
T ss_pred CCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchh
Confidence 00000000 01 245555552 22
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC-------cceeEecccccccccCCCCCHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~-------~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
+...+|++||++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++.. -++.|+++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~-------rd~~d~ee 583 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVD-------RRFKAPDE 583 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEEC-------CSSSCHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeC-------CCCCCHHH
Confidence 36679999999999999999999999999999999999999999999876 37987500 03567777
Q ss_pred HHHHHHHHHHhh---CHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 540 VSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 540 la~~I~~ll~~~---~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
++++|.+++... +...+.++++++ +++.|||+.++++|+++|++++..
T Consensus 584 ~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 584 SVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 777777776532 245556666655 467899999999999999999864
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=297.44 Aligned_cols=358 Identities=11% Similarity=0.071 Sum_probs=229.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (609)
.++|||++++..|.|....||.. .+.+|+++|+++||+|+|+|+........ . ....+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~---~------------------~~~~~ 101 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKD---L------------------QSFKS 101 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHH---H------------------GGGTT
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHH---H------------------Hhhhc
Confidence 56799999999988842346664 68899999999999999999873210000 0 00000
Q ss_pred eeEEEEeCcc-hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchH
Q 007300 162 VDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI 240 (609)
Q Consensus 162 v~~~~v~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~ 240 (609)
.....+.... +.. .+.. +. . .....+.. .+||+| |+|.|.++..
T Consensus 102 ~~~~~~~~~~~~~~--------~i~~------~~----------~---~~~~~~~~-------~~~Dvv-~a~~~~~~~~ 146 (413)
T 2x0d_A 102 FKYVMPEEDKDFAL--------QIVP------FN----------D---RYNRTIPV-------AKHDIF-IATAWWTAYA 146 (413)
T ss_dssp SEECCTTCCCCCSE--------EEEE------CS----------C---CTTCCEEE-------CTTEEE-EECSHHHHHH
T ss_pred cceeeccCCccccc--------eeee------cc----------c---cccccccC-------CCCCEE-EEehHHHHHH
Confidence 0000000000 000 0000 00 0 00000001 158999 9998877655
Q ss_pred HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCC--EE
Q 007300 241 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MV 318 (609)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~v 318 (609)
...+.............|.++.+|+..+. +. + ......+.+..+..++ .+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~---------~-----------------~~~~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 147 AQRIVSWQSDTYGIPPNKILYIIQDFEPG--FY---------Q-----------------WSSQYVLAESTYKYRGPQIA 198 (413)
T ss_dssp HHHHHHHHHHHHTCCCCCEEEEECSCGGG--GS---------C-----------------SSHHHHHHHHTTSCCSCEEE
T ss_pred HHHhhhhhhhhcccccCcEEEEEeechhh--cC---------c-----------------cChHHHHHHHHhccCCceEE
Confidence 44331100000000356788888864320 00 0 0001123344555555 58
Q ss_pred EeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 319 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 319 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+++|+..++.+.+ .|++.. ++.+|+||+|.+.|.+.. .+ .+
T Consensus 199 i~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~---------------------------~~---~~ 239 (413)
T 2x0d_A 199 VFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN---------------------------DK---RQ 239 (413)
T ss_dssp EEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT---------------------------SC---CC
T ss_pred EEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc---------------------------cc---cC
Confidence 9999999999986 344322 688999999876543321 01 12
Q ss_pred CCcEEEEEecc-ccccCHHHHHHHHhhccc--C---CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 399 NIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 399 ~~~~i~~iGrl-~~~Kg~~~ll~a~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
+.+.++++||+ .+.||++.+++|+..+.+ + +++|+++|+|... .++ ....++.+.+..+.+++..+|
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~~~~l~~~~ 312 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLTLEDYADLL 312 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCCHHHHHHHH
Confidence 34688999996 689999999999999865 4 3899999998732 011 123467888777889999999
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++++++|.+++++++
T Consensus 313 ~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 313 KRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp HHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHHHHHHHHTC
T ss_pred HhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHHHHHHcCHH
Confidence 99999999999999999999999999999995 56778999999999987 99999999999999999843
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
. +.+.++ ...+.|||+...++ .+.|+++.
T Consensus 382 ~--~~~~~~-~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 382 N--RDVDKK-ESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp ----------CCBSCGGGCCCC----TTHHHHH
T ss_pred H--HHHhHH-HHHHhCCHHHHHHH-HHHHHHHH
Confidence 2 222122 22468999999888 77777765
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=276.22 Aligned_cols=204 Identities=15% Similarity=0.104 Sum_probs=164.7
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
..+++..++.+|.|+++|+..++.+.+ .+ ++.+||||+|.+.|.+...
T Consensus 169 ~~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~------------------- 216 (406)
T 2hy7_A 169 EREFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDP------------------- 216 (406)
T ss_dssp HHHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCS-------------------
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCcccc-------------------
Confidence 356677899999999999999988764 22 7899999999887754311
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 464 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 464 (609)
.+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ ++++ ...++|.+.+..+
T Consensus 217 ---------~~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 217 ---------SP-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMK 274 (406)
T ss_dssp ---------CS-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCC
T ss_pred ---------cc-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCC
Confidence 01 1233799999999999998 4444332 2789999999986 1111 2345788888888
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccccccCcceeE-ecccccccccCCCCC
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVD 536 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~i~~~~~G~l-~~~~~~~~~~v~~~d 536 (609)
.+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d 338 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGN 338 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTC
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCC
Confidence 8888999999999999999999999999999 99999999987 677889998 7 9999
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHH--HHHHHHc
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEVA 587 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~--~~~l~~~ 587 (609)
+++++++|.++++++. . ...+.|||+.++++++++ |.++...
T Consensus 339 ~~~la~ai~~ll~~~~--------~-~~~~~~sw~~~a~~~~~~~~y~~~~~~ 382 (406)
T 2hy7_A 339 ADSVIAAITQALEAPR--------V-RYRQCLNWSDTTDRVLDPRAYPETRLY 382 (406)
T ss_dssp HHHHHHHHHHHHHCCC--------C-CCSCCCBHHHHHHHHHCGGGSGGGBSS
T ss_pred HHHHHHHHHHHHhCcc--------h-hhhhcCCHHHHHHHHHHhhcccccCcC
Confidence 9999999999999854 1 235789999999999999 8877643
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=260.74 Aligned_cols=339 Identities=16% Similarity=0.015 Sum_probs=226.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
.|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 489999973 2 588888899999999999999999998642111100 112444
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.+..+.+..+ .... ......++......+.+.++.. +||+| |+|..........
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~----------~pDvv-~~~~~~~~~~~~~ 113 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY----------KPDVV-LGMGGYVSGPGGL 113 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH----------CCSEE-EECSSTTHHHHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc----------CCCEE-EEeCCcCchHHHH
Confidence 444432211000 0000 0001111122233344444444 59999 8886443333333
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+... .++|++++.|+... + ...+...+.+|.+++.++
T Consensus 114 ~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~~~ 150 (364)
T 1f0k_A 114 AAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQAFP 150 (364)
T ss_dssp HHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEESST
T ss_pred HHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEecCh
Confidence 3332 58999999986321 0 012334567999998876
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCc-E
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP-V 402 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~-~ 402 (609)
.. + + ++.+|+||+|...+.+.. .+++++++. +.+ +
T Consensus 151 ~~---------~--~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~~i 186 (364)
T 1f0k_A 151 GA---------F--P--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPVRV 186 (364)
T ss_dssp TS---------S--S--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSEEE
T ss_pred hh---------c--C--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCcEE
Confidence 43 1 1 577999999877665431 134556543 335 4
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeE-EEEEeCCChhhHHHHHHHHHhCC-CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+++.|++.+.||.+.+++|+..+.+ +++ ++++|+|+ . +.++++..+++ .++.+.+.. +++..+|+.||++|+
T Consensus 187 l~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 187 LVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVC 260 (364)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEE
T ss_pred EEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEE
Confidence 5566799999999999999999966 788 56788887 2 55666665554 357766544 456679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cccccCcceeEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~i~~~~~G~l~~~~~~~~~~v~~~d--~~~la~~I~~ll~~ 550 (609)
||. |++++|||++|+|||+++.+|.. +++.++ .|+++ +++| +++++++|.++ +
T Consensus 261 ~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l--~ 323 (364)
T 1f0k_A 261 RSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW--S 323 (364)
T ss_dssp CCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC--C
T ss_pred CCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc--C
Confidence 994 99999999999999999999874 355555 59976 8888 99999999998 4
Q ss_pred hCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 551 ~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++.+.++++++. .+.|+|+.++++++++|++..+
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 324 --RETLLTMAERARAASIPDATERVANEVSRVARALEH 359 (364)
T ss_dssp --HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred --HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence 667777776663 4689999999999999987653
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=270.82 Aligned_cols=366 Identities=16% Similarity=0.178 Sum_probs=265.6
Q ss_pred HHHHHHHHHh-hhhhccCCCCC-CCCCCceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCC
Q 007300 201 SLLCQAALEA-PRILNLNSNKY-FSGPYDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQG 270 (609)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~-~~~~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~ 270 (609)
.+|+.+.++. ++.+......+ ..++||+| |+||||+++++. +++..+...++ + .+..++||+|++.++|
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~~~~l~~p~vi-HlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~eg 351 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRKLHELADYEVI-QLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEA 351 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGHHHHEEE-EEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhcCCccEE-EecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhh
Confidence 4677787775 55331000000 00148998 999999999888 66544311111 1 4788999999999998
Q ss_pred c--cccccccccC---------Cccccccc-----------cccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHH
Q 007300 271 R--FAFEDFGLLN---------LPAQFKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 328 (609)
Q Consensus 271 ~--~~~~~~~~l~---------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~ 328 (609)
. |+.+.+..+- ++.+|... +.. .+. .....+++++.++..|+.|.+||+.+.+.
T Consensus 352 le~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i---~~~~~vnMa~lai~~S~~VNgVS~lH~e~ 427 (796)
T 1l5w_A 352 LERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAV---VHDKQVHMANLCVVGGFAVNGVAALHSDL 427 (796)
T ss_dssp SCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCS---EETTEEEHHHHHHHHSSEEEESSHHHHHH
T ss_pred hhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhh-hhc---ccCCcccHHHHHHHhcCccccccHHHHHH
Confidence 5 5554443211 11111000 000 001 11236789999999999999999999999
Q ss_pred HhcccCCCccchhhhccCCeeEecCCCCCCCc----CCCCccccccccC----------------cch------hcccch
Q 007300 329 LVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST------VMDAKP 382 (609)
Q Consensus 329 l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~----~p~~~~~~~~~~~----------------~~~------~~~~~~ 382 (609)
++.. .++ ... .+.+.++..|.||||...| +|..++.+...|+ .++ +...|.
T Consensus 428 ik~~-~f~-~~~-~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~ 504 (796)
T 1l5w_A 428 VVKD-LFP-EYH-QLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQ 504 (796)
T ss_dssp HHHT-TSH-HHH-HHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHH
T ss_pred HHhH-Hhh-HHH-HhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 9852 222 110 1233489999999999999 7777766666665 333 446777
Q ss_pred HHHHH----HHHHhCCCCCCCCcEEEEEeccccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH---
Q 007300 383 LLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ--- 445 (609)
Q Consensus 383 ~~~~~----~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~--- 445 (609)
.+|.. ++++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|||.|++.+.++..
T Consensus 505 ~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~i 584 (796)
T 1l5w_A 505 ANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNI 584 (796)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHH
Confidence 77877 589999999999999999999999999999 8888887755 479999999988655544
Q ss_pred ---HHHHHH------hCCC--ceEEEeecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCcccc
Q 007300 446 ---LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDT 512 (609)
Q Consensus 446 ---l~~l~~------~~~~--~v~~~~~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~ 512 (609)
+.+++. +.++ +|.+...|+...++.++++||+++.||+ +|+||++.+-+|.+|++.|++--|...|+
T Consensus 585 Ik~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi 664 (796)
T 1l5w_A 585 IFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEI 664 (796)
T ss_dssp HHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHH
T ss_pred HHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeeh
Confidence 777776 5666 8999999999999999999999999999 89999999999999999999988999988
Q ss_pred ccc--CcceeEecccccccccCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 513 VEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 513 i~~--~~~G~l~~~~~~~~~~v~~~d~~~la---~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... ..|.++|..++.
T Consensus 665 ~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 665 AEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp HHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHHHHHHTST
T ss_pred hhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHHHHHHHhc
Confidence 765 46999994 3 556655 33322222221 247888888889999999986 889999999864
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=273.64 Aligned_cols=472 Identities=15% Similarity=0.151 Sum_probs=314.4
Q ss_pred ccchHHHHhhchhHHHHhCCCeEEEEeecCCC-c-------------cccCCC----------ceEEEEEeCCEEeeEEE
Q 007300 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDT----------DVVIELKVGDKIEKVRF 154 (609)
Q Consensus 99 ~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~-~-------------~~~~~~----------~~~~~~~~~~~~~~~~~ 154 (609)
..||+|+......+.++..|....-++..|.. + ++.|.. ...+.+..+++....-.
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 57999999999999999999999999988762 1 111211 22344444554322222
Q ss_pred EEeeEcC-----eeEEE---EeCc-ch-hhh-------------hcC-CCCCeeccCCCCCCCcchHHHH---HHHHHHH
Q 007300 155 FHCHKRG-----VDRVF---VDHP-WF-LAK-------------VWG-KTQSKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (609)
Q Consensus 155 ~~~~~~g-----v~~~~---v~~~-~~-~~~-------------~~~-~~~~~~y~~~~~~~~~~~~~r~---~~~~~~~ 207 (609)
+..+..| +-..+ .... .| +.. .+. ..-..+|+..+. +....+|+ .+|+.+.
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~--~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTT--YEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSS--HHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCCC--cchHHHHHHhHHHHHHHH
Confidence 2222222 11000 0000 01 000 000 001245654321 12234443 4677887
Q ss_pred HHh-hhhhccCC-CCCCCCCCceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCCc--cccc
Q 007300 208 LEA-PRILNLNS-NKYFSGPYDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFE 275 (609)
Q Consensus 208 ~~~-~~~~~~~~-~~~~~~~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~~--~~~~ 275 (609)
++. ++.+.... +.-..++||+| |+||||+++++. +++..+...++ + .+..++||+|++.++|. |+.+
T Consensus 270 lq~ilr~~~~~~~~l~~l~~p~vi-HlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~ 348 (796)
T 2c4m_A 270 LQAMIQDHLAHHKDLSNFAEFHSV-QLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQ 348 (796)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHEEE-EEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHH
T ss_pred HHHHHHHHHHhCCChhhcCCCeEE-EeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHH
Confidence 775 55331100 00001148998 999999999888 66544211111 1 46789999999999996 5555
Q ss_pred cccccC---------CccccccccccccC------CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccch
Q 007300 276 DFGLLN---------LPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD 340 (609)
Q Consensus 276 ~~~~l~---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 340 (609)
.+..+- ++.++...+....+ .........+++++.++..|+.|.+||+.+.+.++.. .++ ..-
T Consensus 349 l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~-~f~-~~~ 426 (796)
T 2c4m_A 349 IFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE-TLA-DWY 426 (796)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT-TTH-HHH
T ss_pred HHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh-hhh-hHH
Confidence 443211 11111110000000 0001122367999999999999999999999999852 222 110
Q ss_pred hhhccCCeeEecCCCCCCCc----CCCCccccccccC-----------------cch------hcccchHHHHH----HH
Q 007300 341 NIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLKEA----LQ 389 (609)
Q Consensus 341 ~~~~~~~i~vI~nGvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~----~~ 389 (609)
...+.++..|.||||...| +|..++.|...|+ .++ +...|..+|.. ++
T Consensus 427 -~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~ 505 (796)
T 2c4m_A 427 -ALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWIL 505 (796)
T ss_dssp -HHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234489999999999999 7776666665555 333 34677777877 59
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH------HHHHHH--
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------LEQLEI-- 451 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~------l~~l~~-- 451 (609)
++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|||.|++.+.++.. +.+++.
T Consensus 506 ~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~i 585 (796)
T 2c4m_A 506 ERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLV 585 (796)
T ss_dssp HHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 8888887753 379999999998655544 777777
Q ss_pred ----hCCC--ceEEEeecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeE
Q 007300 452 ----LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQ 521 (609)
Q Consensus 452 ----~~~~--~v~~~~~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l 521 (609)
+.++ +|.+...|+...++.++++||+++.||+ +|+||++.+-+|.+|++.|++--|...|+.++ ..|||+
T Consensus 586 n~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~ 665 (796)
T 2c4m_A 586 NNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYI 665 (796)
T ss_dssp HTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEE
T ss_pred ccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEE
Confidence 6777 8999999999999999999999999999 89999999999999999999998999988765 469999
Q ss_pred ecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 522 MGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 522 ~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
||. ...++.++..+ .+..+-+. .+.++++..+.+...|||... .+|.++|..++.
T Consensus 666 FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 666 FGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp ESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred ecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 942 23667777665 44433221 236777777778899999988 889999999974
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-27 Score=258.15 Aligned_cols=295 Identities=15% Similarity=0.119 Sum_probs=208.9
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
++|+| |+|||+..+++.+++... .++|+++++|...+.. ..+.. +| .
T Consensus 123 ~~DiV-~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pfp~~----~~~~~--lp--------------------~ 169 (482)
T 1uqt_A 123 DDDII-WIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNA--LP--------------------T 169 (482)
T ss_dssp TTCEE-EEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTT--ST--------------------T
T ss_pred CCCEE-EEECchHHHHHHHHHHhC------CCCcEEEEEcCCCCCH----HHHhh--Cc--------------------c
Confidence 46999 999999999999888753 5899999999642210 00000 00 1
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccc------hhhhccCCeeEecCCCCCCCcCCCCccccccccCcch
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 376 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~------~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~ 376 (609)
...+...+..+|.+.+.+..+.+.+.+... .+.+. ...-+..++.+||||+|.+.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 122334556789988888877776653110 01000 000012378999999998877542100
Q ss_pred hcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---hhH
Q 007300 377 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PME 443 (609)
Q Consensus 377 ~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~----~---~~~ 443 (609)
..... ...++++++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 456777776 45899999999999999999999999864 2 58899999632 1 345
Q ss_pred HHHHHHHHhCC--------CceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007300 444 KQLEQLEILYP--------EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 509 (609)
Q Consensus 444 ~~l~~l~~~~~--------~~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 509 (609)
+.+++++.+.+ ..+.++ +..+.+++..+|+.||++++||..|+||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 66666654321 125554 445788888999999999999999999999999999997 8999998888
Q ss_pred ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHH
Q 007300 510 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 510 ~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l 584 (609)
.+.+. +|+++ +|.|+++++++|.+++++. .+.+.++.+++ ..+.|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88883 78876 9999999999999999862 33444444433 235699999999999999876
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=264.77 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=167.4
Q ss_pred cCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhC
Q 007300 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 393 (609)
Q Consensus 314 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 393 (609)
.+|.++++|+...+ ++ .++.+|||..+.....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888876433 21 18899999543322111110 112456778
Q ss_pred CCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEe-CCChhhHHHHHHHHHhCC---CceEEEeecChHH
Q 007300 394 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 467 (609)
Q Consensus 394 l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 467 (609)
++.+ ++++++||+.+ ||++.+++++.++.+ ++++|+|+| +|+ ..+.++++..+++ ++|.+.+..+.++
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8643 35669999999 999999999999854 799999999 776 6677777777654 4688887777778
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccccccCcceeEecccccccccCC
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 533 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~i~~~~~G~l~~~~~~~~~~v~ 533 (609)
+..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |+.|+|.+
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------ 507 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------ 507 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC------------------
Confidence 88899999999999999 999999999999999999 9999 88886632
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhCCchHHHHHHHHHHHHHHHcCCCCC
Q 007300 534 PVDVAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVAGSEPG 592 (609)
Q Consensus 534 ~~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~--~~~fs~~~~a~~~~~~~~~l~~~~~~~~ 592 (609)
|+++++++|.+++++ ++.+.+|++++ + .+.|||+.++++++++|++++......|
T Consensus 508 --~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~~ 567 (568)
T 2vsy_A 508 --DDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHGWLG 567 (568)
T ss_dssp --SHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred --CHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 889999999999998 66666666554 3 3679999999999999999998765443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-27 Score=246.31 Aligned_cols=223 Identities=15% Similarity=0.086 Sum_probs=168.0
Q ss_pred HHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 308 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 308 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+.... +
T Consensus 143 ~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------~ 195 (375)
T 3beo_A 143 NRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------S 195 (375)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------C
T ss_pred hhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------h
Confidence 34434 4599999999999999886 566555 89999999 786655432100 1
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHhCCCceEEEe
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
..+++++ + ++..+++++||+.+. ||++.+++|+.++.+ +++++++ |.|+ ..+.+.++++... .+++.+.+
T Consensus 196 ~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~g 269 (375)
T 3beo_A 196 HPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLIE 269 (375)
T ss_dssp CHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred HHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEeC
Confidence 1233333 2 233578899999876 999999999999865 6888655 6554 3345666665322 24687766
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC-CCCcccccccCcceeEecccccccccCCCCCHHHH
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
.....++..+|+.||++|+|| |.+++|||++|+|||+++ .||..|++.++ +|+++ ++ |++++
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~l 332 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEETI 332 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHHH
Confidence 666667888999999999999 778999999999999996 49999999887 99975 65 99999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHH
Q 007300 541 STTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 541 a~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~ 582 (609)
+++|.+++++ ++.+.+|++++ ..+.|+|+.++++++++++
T Consensus 333 a~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9999999997 67777776654 2457899999988887763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.3e-27 Score=246.90 Aligned_cols=232 Identities=16% Similarity=0.086 Sum_probs=171.1
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.+.+|.++++|+..++.+.+ +|++.+ ++.+|+||+ |...+.+... ......+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccchhhhHHHHH
Confidence 34599999999999999876 566554 899999995 4221111000 000001235667
Q ss_pred HhC-CCCCCCCcEEEEEeccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChH
Q 007300 391 EVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 466 (609)
Q Consensus 391 ~~g-l~~~~~~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 466 (609)
++| ++.+ +..+++++||+.+. ||++.+++|+.++.+ ++++|++++...+.+.+.++++.... +++.+.+.....
T Consensus 197 ~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v~~~g~~~~~ 274 (384)
T 1vgv_A 197 NYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVILIDPQEYL 274 (384)
T ss_dssp TCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEEEECCCCHH
T ss_pred hccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCEEEeCCCCHH
Confidence 777 6432 23578899999876 999999999999865 68999886332234566676664332 457776555556
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
++..+|+.||++|+|| |.+++|||++|+|||+++. ||..|++.++ +|+++ ++ |+++++++|.
T Consensus 275 ~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d~~~la~~i~ 337 (384)
T 1vgv_A 275 PFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-DKQRIVEEVT 337 (384)
T ss_dssp HHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-SHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-CHHHHHHHHH
Confidence 7888999999999999 4458999999999999986 9999999888 99986 66 9999999999
Q ss_pred HHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007300 546 RALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++++ ++.+.+|++++ ..+.|+|+.+++.++++|.++++
T Consensus 338 ~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 338 RLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred HHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 99997 77777777654 34678999999999888877764
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-25 Score=248.71 Aligned_cols=341 Identities=16% Similarity=0.169 Sum_probs=249.8
Q ss_pred CceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCCc--cccccccccC---------Ccccc
Q 007300 226 YDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFGLLN---------LPAQF 286 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~~--~~~~~~~~l~---------~~~~~ 286 (609)
||+| |+||||+++++. +++..+-..++ + ....++||+|++.++|. |+...+..+- ++.+|
T Consensus 321 p~vi-HlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 321 KVAI-QLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HEEE-EEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEE-EccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 6898 999999999888 66554321111 1 24459999999999998 7766554321 11111
Q ss_pred ccc-----------cccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC
Q 007300 287 KSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355 (609)
Q Consensus 287 ~~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv 355 (609)
... +......... ....+++++.++..|+.|.+||+.+.+.+++. .++ +.-. ..+.++..|.|||
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNGI 475 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQNKTNGI 475 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEECCCCB
T ss_pred HHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhcccccCCc
Confidence 000 0000110100 12468999999999999999999999999742 222 1101 1244899999999
Q ss_pred CCCCc----CCCCccccccc-----------------cCc-chhc----ccchHHHHH----HHHHhCCCCCCCCcEEEE
Q 007300 356 DVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 356 d~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----~~~~~gl~~~~~~~~i~~ 405 (609)
|...| +|..++.|... |.. .++. ..|..+|.. ++++.|++.+++.+.+++
T Consensus 476 ~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~ 555 (824)
T 2gj4_A 476 TPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp CTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred ChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEee
Confidence 99999 67665555433 665 2331 466667766 889999999999999999
Q ss_pred EeccccccCHHHH-HHHHhhcc---c-C-----CeEEEEEeCCChhhHHH------HHHHHHhC------CC--ceEEEe
Q 007300 406 IGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARGVA 461 (609)
Q Consensus 406 iGrl~~~Kg~~~l-l~a~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~v~~~~ 461 (609)
+.|+.++||++++ +..+.++. + + +++|||.|++.+.++.. +.+++... ++ +|.+..
T Consensus 556 vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~ 635 (824)
T 2gj4_A 556 VKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET
T ss_pred eecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC
Confidence 9999999999998 88888774 2 2 67999999988655544 77777654 45 789999
Q ss_pred ecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCcccccc--cCcceeEecccccccccCCCCCH
Q 007300 462 KFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDV 537 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~--~~~~G~l~~~~~~~~~~v~~~d~ 537 (609)
.|+...++.++++||+++.||+ +|+||++.+-||.+|++.|++--|...|+.+ ...|||+|| .. +
T Consensus 636 nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~~-~ 704 (824)
T 2gj4_A 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------MR-V 704 (824)
T ss_dssp TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------CC-H
T ss_pred CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------Cc-H
Confidence 9999999999999999999999 8999999999999999999999898888765 457999984 22 5
Q ss_pred HHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 538 AAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 538 ~~la~~I~-------~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++ ..++ .+.+. .+.++++..+.+...|||... ..|.++|.+++.
T Consensus 705 ~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 705 EDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp HHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred HHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 555 4432 22222 357777788888899999998 889999999874
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.3e-25 Score=235.92 Aligned_cols=295 Identities=14% Similarity=0.130 Sum_probs=214.3
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||+|..++|.+++... ++.++.|.+|-..+.. ..|. -+|.. ..
T Consensus 150 ~D~V-wVhDYhL~llp~~lR~~~------~~~~igfFlHiPfPs~----e~f~--~Lp~~------------------~r 198 (496)
T 3t5t_A 150 DPVY-LVHDYQLVGVPALLREQR------PDAPILLFVHIPWPSA----DYWR--ILPKE------------------IR 198 (496)
T ss_dssp SCEE-EEESGGGTTHHHHHHHHC------TTSCEEEECCSCCCCH----HHHT--TSCHH------------------HH
T ss_pred CCEE-EEeCccHhHHHHHHHhhC------CCCeEEEEEcCCCCCH----HHHh--hCcHh------------------HH
Confidence 5898 999999999999999875 7899999999643211 0000 01100 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--C-Cccch---hh----hccCCeeEecCCCCCCCcCCCCccccccccCcc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--K-GVELD---NI----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 375 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~-g~~~~---~~----~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~ 375 (609)
..+-.++..+|.|.+.++.+++.+.+... . |.+.+ .. -+..++.++|+|||++.|.+....
T Consensus 199 ~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~--------- 269 (496)
T 3t5t_A 199 TGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ--------- 269 (496)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC---------
T ss_pred HHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH---------
Confidence 34456788999999999999988765221 1 32211 00 122478899999999998765320
Q ss_pred hhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C---CeEEEEEeCC-----C--hhhH
Q 007300 376 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPME 443 (609)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~---~~~lvivG~g-----~--~~~~ 443 (609)
.+..++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.+ + ..++
T Consensus 270 --------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~ 335 (496)
T 3t5t_A 270 --------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYV 335 (496)
T ss_dssp --------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHH
T ss_pred --------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHH
Confidence 0245677776 458999999999999999999999 7754 4 3678888742 1 2456
Q ss_pred HHHHHHHHhCCC-----ceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcC---CceEEcCCCCccccccc
Q 007300 444 KQLEQLEILYPE-----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVEE 515 (609)
Q Consensus 444 ~~l~~l~~~~~~-----~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~i~~ 515 (609)
++++++..+.+. .|.+.+..+.+++..+|+.||++++||..|+||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 336 ~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~- 414 (496)
T 3t5t_A 336 HRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG- 414 (496)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-
T ss_pred HHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-
Confidence 667776554321 4777766688888899999999999999999999999999997 8999999999998884
Q ss_pred CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 516 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 516 ~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+|+++ +|.|++++|++|.++|+++. ++++++.+.. ....+++...++.+++.+......
T Consensus 415 -~~allV----------nP~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 -EYCRSV----------NPFDLVEQAEAISAALAAGP-RQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp -GGSEEE----------CTTBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368876 99999999999999999843 3333333322 357799999999999888877544
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=213.63 Aligned_cols=183 Identities=31% Similarity=0.517 Sum_probs=155.6
Q ss_pred EecCCCCCCCcC--CCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccc-cccCHHHHHHHHhhcc
Q 007300 350 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 426 (609)
Q Consensus 350 vI~nGvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~-~~Kg~~~ll~a~~~l~ 426 (609)
.||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++++..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 389999999998 7531 0122356789999987 336999999999 9999999999999995
Q ss_pred --c--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEE-EeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCce
Q 007300 427 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 501 (609)
Q Consensus 427 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~Pv 501 (609)
+ ++++|+|+|.+.+...+.++++..+++ ++.+ .+..+.+.+..+|+.||++++||..|+||++++|||++|+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 4 689999999988667788888888877 7888 777788888899999999999999999999999999999999
Q ss_pred EEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHH
Q 007300 502 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNG 563 (609)
Q Consensus 502 I~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~~~~~~~~~~~ 563 (609)
|+++.+|..+++ ++.+|+++ ++.|+++++++|.++++ + ++.+.++++++
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a 192 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENC 192 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 999999999999 88999987 89999999999999999 7 66777776665
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=198.81 Aligned_cols=159 Identities=16% Similarity=0.170 Sum_probs=131.6
Q ss_pred cEEEEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+++..+|+.||+++
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 789999999999999999999999965 689999999987 567777777777666666 6667788889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 557 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 557 (609)
+||.+|+||++++|||++|+ |||+ ++.|+..+++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568899999998766 33 899999999999999997 66666
Q ss_pred HHHHHH--HHhhCCchHHHHH
Q 007300 558 EMMKNG--MAQDLSWKGPAKK 576 (609)
Q Consensus 558 ~~~~~~--~~~~fs~~~~a~~ 576 (609)
++++++ ..++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 666655 2488999998764
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-22 Score=208.13 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=162.6
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
....+|.++++|+..++.+.+ .|++.+ ++.+|+|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHH
Confidence 345699999999999999986 576655 899999964 32111000 00011
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChH
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIP 466 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 466 (609)
+++ + ++.++++++||+...||++.+++|+..+.+ ++++++++ |++. ...+.++++... .+++.+.+.....
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 233577889999888999999999999865 68898886 6553 355666666433 2367776555555
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
++..+|+.||++|.|| | |+ ++|||++|+|||++ +.+|..+++.++ +|+++ + .|+++++++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHH
Confidence 6778999999999999 2 44 88999999999998 578888987665 78874 4 59999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 546 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++++ ++.+++|+++ .+.|++...++++.+.+.+++.
T Consensus 330 ~ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 99987 7777788753 4678888999999999998875
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-21 Score=179.53 Aligned_cols=142 Identities=16% Similarity=0.203 Sum_probs=125.6
Q ss_pred CCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCCh--hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.+.++|+|+|++.+.||++.+++|+..+ ++++|+|+|.++. .+++.++++....++++.+.+..+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 3558999999999999999999999999 6899999999873 45555554444566679988888888899999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
|++++||..|+||++++|||++|+|||+++.|+..|++.++.+|++ + +.|+++++++|.++++++.
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCTT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCHH
Confidence 9999999999999999999999999999999999999999999996 4 7899999999999998843
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-20 Score=196.22 Aligned_cols=202 Identities=13% Similarity=0.043 Sum_probs=144.6
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
+++..++.+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 5566788999999999999999986 4543 688999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCce-------
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------- 457 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v------- 457 (609)
+. .+ ..+++++.|+ ..||.+.+++|++++.+ ++++|+|+|+|+. ..+.++++..+.+...
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777665 46899999999999865 6899999998863 2245666665554221
Q ss_pred --EEEeecChHHHHHHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccccccC-cceeEecccccccccC
Q 007300 458 --RGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEAV 532 (609)
Q Consensus 458 --~~~~~~~~~~~~~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~-~~G~l~~~~~~~~~~v 532 (609)
..+..+ .+++..+|+.||++++||.+ |.+|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~~~~-~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~---------- 328 (374)
T 2xci_A 260 GDVILVDR-FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF---------- 328 (374)
T ss_dssp SSEEECCS-SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE----------
T ss_pred CcEEEECC-HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE----------
Confidence 122222 24567799999998888765 67899999999999999985 789999988763 477776
Q ss_pred CCCCHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHh
Q 007300 533 DPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQ 566 (609)
Q Consensus 533 ~~~d~~~la~~I~~ll~~~~~-~~~~~~~~~~~~~ 566 (609)
.++|+++|+++|.+++++ +. ..+.+.+++.+.+
T Consensus 329 ~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 329 EVKNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp ECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 789999999999999986 43 3444444443333
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-18 Score=179.49 Aligned_cols=244 Identities=16% Similarity=0.085 Sum_probs=167.2
Q ss_pred CCceEEEecc--cccchH-HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcC
Q 007300 225 PYDVVFVAND--WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 301 (609)
Q Consensus 225 ~pDvV~h~h~--~~~~~~-~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 301 (609)
++|+| +.+. |+.... ..+++...+ .++|+++++||+.+.. +. ..
T Consensus 74 ~~DvI-i~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~----------~~---------------- 120 (339)
T 3rhz_A 74 HGDVV-IFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS----------GN---------------- 120 (339)
T ss_dssp TTCEE-EEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG----------GG----------------
T ss_pred CCCEE-EEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc----------cc----------------
Confidence 68999 5532 222222 344444321 4899999999876521 10 00
Q ss_pred CchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccc
Q 007300 302 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 381 (609)
Q Consensus 302 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~ 381 (609)
......++..++.||.|+++|+.+++.+.+ .|++.. ++..+++. |.. .+..
T Consensus 121 ~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~~-~~~--~~~~----------------- 171 (339)
T 3rhz_A 121 FYLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGMW-DHP--TQAP----------------- 171 (339)
T ss_dssp GGGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCSC-CCC--CCCC-----------------
T ss_pred hhhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCCC-Ccc--Cccc-----------------
Confidence 012346788899999999999999999987 566533 55433332 211 0000
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEe
Q 007300 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 382 ~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
+....+.++|+|+|++..... +..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ------------~~~~~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ------------MFPAGLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ------------CCCCEEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ------------ccccCCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001124479999999985322 2222 368999999999843 244 799999
Q ss_pred ecChHHHHHHHHhCcEEEecCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCC
Q 007300 462 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~ 534 (609)
..+.++++.+++.+|+.++.... ..+|.+++|||++|+|||+++.+++.+++.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999998886211 25699999999999999999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHH
Q 007300 535 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 577 (609)
Q Consensus 535 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~ 577 (609)
.+.++++++|..+. .+.+.+|++++. .+.+++...+++.
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 46889998888764 346777777763 3456666555543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.5e-18 Score=179.05 Aligned_cols=221 Identities=13% Similarity=0.080 Sum_probs=159.4
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..+|.+++.|+..++.+.+ .|++++ ++.++.|. +|...+.+.... +...+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------chHHHHh
Confidence 4589999999999999987 677766 89999884 554333222100 1122333
Q ss_pred hCCCCCCCCcEEEEEecccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHH
Q 007300 392 VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 468 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 468 (609)
+ + ++..++++.||.+. .|+++.+++|+..+.+ +++++++.+...+...+.++++.... .++.+.......++
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCCCCHHHH
Confidence 3 2 12345667777654 3778999999999865 68999987433234556666543222 35777666666678
Q ss_pred HHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 469 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 469 ~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
..+|+.||+++.+| |...+|||++|+|+|++ +.++..|.++.| +|+++ .+ |+++++++|.++
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~~ai~~l 358 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLIKEALDL 358 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHHHHHHHH
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHHHHHHHH
Confidence 88999999999887 55569999999999999 678888888766 78864 44 999999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 548 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 548 l~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++ ++.+.+|+++ ...|.....+++..+.+.+.+.
T Consensus 359 l~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 359 LDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 987 7777777654 3557777788888888887774
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-18 Score=182.46 Aligned_cols=229 Identities=14% Similarity=0.068 Sum_probs=159.0
Q ss_pred HHHH-hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHH
Q 007300 308 MKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 308 ~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+.. -..+|.++++|+..++.+.+ .|++++ ++.++.|.+ |...+.+... ......+
T Consensus 159 ~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~~ 216 (396)
T 3dzc_A 159 NRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDLQ 216 (396)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHHH
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhhH
Confidence 3444 45789999999999999986 677766 889998853 4221111000 0001113
Q ss_pred HHHHHHhC-CCCCCCCcEEEEEecccc-ccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEE
Q 007300 386 EALQAEVG-LPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGV 460 (609)
Q Consensus 386 ~~~~~~~g-l~~~~~~~~i~~iGrl~~-~Kg~~~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~ 460 (609)
+++++++| ++.+. ..++++.+|.+. .|+++.+++|+..+.+ ++++|++. |.+ +...+.++++... ..++.+.
T Consensus 217 ~~~r~~lg~l~~~~-~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~~ 293 (396)
T 3dzc_A 217 ATLESQFPMLDASK-KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVLI 293 (396)
T ss_dssp HHHHHTCTTCCTTS-EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEEE
T ss_pred HHHHHHhCccCCCC-CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEEe
Confidence 67788888 44322 234455556543 4789999999999865 68999886 544 3355666654322 2357766
Q ss_pred eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHH
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
......+...+|+.||++|.+| + | +++|||++|+|+|++ +.++..|++++| +++++ . .|+++
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S---G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~~ 356 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS---G-G-IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQQ 356 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC---S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHHH
T ss_pred CCCCHHHHHHHHHhcCEEEECC---c-c-HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHHH
Confidence 5555556678999999999998 3 4 449999999999999 788888988877 56653 3 48999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 540 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 540 la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
++++|.+++++ ++.+.+|++++ ..|.....+++..+++.
T Consensus 357 l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 357 ICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 99999999997 77777777643 55777777777777654
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=184.66 Aligned_cols=159 Identities=15% Similarity=0.057 Sum_probs=118.3
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
..++++.|++. .++.+.+.++++.+.+.++++++++++.. ..+.++ ..+.++.+.+..+ ...+|+.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEEE
Confidence 35678888886 77888888888887666788887766542 111111 2345677655442 557999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCC----CcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHhhCH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 553 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~~ 553 (609)
.++ .+.+++|||++|+|+|+...+ +..+.+.+..+|+++ ++. |+++++++|.+++++ +
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~--~ 377 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE--E 377 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--H
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--H
Confidence 765 347999999999999996654 477888888899976 666 899999999999998 5
Q ss_pred HHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 554 QALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 554 ~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
+.+.+|++.+ +.+.++++.+++.+++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 5556665544 46778999999999988753
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-14 Score=152.62 Aligned_cols=161 Identities=13% Similarity=0.082 Sum_probs=106.1
Q ss_pred EEEEEeccccccCHHHHHHHHhhccc-CCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
++++.|++...+..+.+.+++..+.. .++++++ +|.+. .+ .+.+.....+.++... .|. +++..+|+.||++|
T Consensus 183 ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~-~f~-~dm~~~l~~aDlvI 257 (365)
T 3s2u_A 183 LLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVA-PFI-SDMAAAYAWADLVI 257 (365)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEE-SCC-SCHHHHHHHCSEEE
T ss_pred EEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceecccccccccc-cch-hhhhhhhccceEEE
Confidence 45566788888888999999998865 4566554 34433 33 3333334455445543 343 34567999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
.-+ -++++.|+|++|+|+|....... .+.+.+...|+++ +.. ++++|+++|.++++
T Consensus 258 ~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll~ 323 (365)
T 3s2u_A 258 CRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVLM 323 (365)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred ecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHHC
Confidence 543 36889999999999998765432 2345555677765 433 58999999999999
Q ss_pred hhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
| ++.+.+|++++. .+....-+++..+.++++.
T Consensus 324 d--~~~~~~m~~~a~--~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 324 H--PETLRSMADQAR--SLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp C--THHHHHHHHHHH--HTCCTTHHHHHHHHHHHHC
T ss_pred C--HHHHHHHHHHHH--hcCCccHHHHHHHHHHHHH
Confidence 8 778888888763 2333344555555555554
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-15 Score=161.34 Aligned_cols=161 Identities=12% Similarity=0.059 Sum_probs=109.6
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhccc-CCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
+..++++.|++. .++.+.+.++++.+.+ ++++++ ++|++.. .+.++ ..+.++.+....+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~--~~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVT--PAELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---C--GGGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC--hHHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788999998 5665665555555554 478884 6787652 11121 244567765544443 5899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
++|..+- +++++|||++|+|+|+...++ ..+.+.+...|+.+ +++ |+++++++|.+++++
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 9997542 378999999999999998765 46667777889976 655 889999999999987
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++.+.++++.+ +.+..+++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 54444454433 3456788888888888776543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=162.05 Aligned_cols=152 Identities=14% Similarity=0.114 Sum_probs=98.5
Q ss_pred CcEEEEEecccccc----------CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHH
Q 007300 400 IPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 469 (609)
Q Consensus 400 ~~~i~~iGrl~~~K----------g~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 469 (609)
.+++++.|++...| .++.+++++..+ ++++++++++.. .+.+. ..+.++.+....+ ..
T Consensus 228 ~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~~ 295 (398)
T 4fzr_A 228 PRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---LS 295 (398)
T ss_dssp CEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---HH
T ss_pred CEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---HH
Confidence 36778889996544 466667766665 789999887652 22222 3456677665543 45
Q ss_pred HHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEE----cCCCCcccccccCcceeEecccccccccCCCC--CHHHHHHH
Q 007300 470 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTT 543 (609)
Q Consensus 470 ~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~ 543 (609)
.+++.||++|. ++-+.+++|||++|+|+|+ .+..+..+.+.+...|+++ ++. |+++++++
T Consensus 296 ~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~a 361 (398)
T 4fzr_A 296 AIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLAA 361 (398)
T ss_dssp HHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHHH
T ss_pred HHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHH
Confidence 68999999995 4457899999999999999 4555778888888899976 665 78999999
Q ss_pred HHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHH
Q 007300 544 VRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 544 I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~ 579 (609)
|.+++++ +..++++.+.+ +....+|+.+++.+++
T Consensus 362 i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 362 CARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 9999998 44555554443 4577888888877653
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=153.96 Aligned_cols=157 Identities=14% Similarity=0.140 Sum_probs=107.4
Q ss_pred cEEEEEeccccccCH-HHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~-~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.++++.|++...|+. ..+++++.+..+ ++++++++|++.. .+.+. ..+.++.+....+.. .+++.||++
T Consensus 220 ~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~~ 290 (391)
T 3tsa_A 220 RVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCELV 290 (391)
T ss_dssp EEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSEE
T ss_pred EEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCEE
Confidence 566777998765433 555555444433 5899999987652 11121 234567665544433 367999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEc----CCCCcccccccCcceeEecccccccccCCC----CCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~----~d~~~la~~I~~ll~~ 550 (609)
|.. +-+.+++|||++|+|+|+. +..+..+.+.+...|+++ ++ .|+++++++|.+++++
T Consensus 291 v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~~ 356 (391)
T 3tsa_A 291 ICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLGD 356 (391)
T ss_dssp EEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHTC
T ss_pred EeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHcC
Confidence 953 4457899999999999995 445567778888899976 66 6899999999999987
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~ 582 (609)
+..+.++.+.+ +....+++.+++.+++++.
T Consensus 357 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 357 --TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp --THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred --HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 44444444433 4677888888887776543
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-13 Score=145.84 Aligned_cols=156 Identities=15% Similarity=0.065 Sum_probs=105.2
Q ss_pred CcEEEEEecccccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~~K--g~~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
..++++.|+....+ .+..+++++..+ ++++++ +|++.. .+.++ +.+.++......+.. .+++.||
T Consensus 232 ~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~ad 299 (402)
T 3ia7_A 232 PVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHAR 299 (402)
T ss_dssp CEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTEE
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhCC
Confidence 35678889887554 344445554443 577666 565531 11111 245567765544443 6899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcC-----CCCcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVAS-----TGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~-----~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
++|..+- ..+++|||++|+|+|+.. ..+..+.+.+...|..+ .++ ++++++++|.++++
T Consensus 300 ~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll~ 365 (402)
T 3ia7_A 300 ACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLAA 365 (402)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHHH
T ss_pred EEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHHc
Confidence 9997642 378899999999999554 44677778888889875 555 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 550 ~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
+ ++.+.++.+.+ +....+++..++.+++++.+
T Consensus 366 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 366 D--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp C--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 8 54444444332 45667888888888887754
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-13 Score=145.94 Aligned_cols=153 Identities=13% Similarity=0.082 Sum_probs=107.5
Q ss_pred CcEEEEEeccccc-cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
..++++.|++... ++.+.+.++++.+.+.++++++++++.. .+.++ ..+.++.+....+ ...+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCEE
Confidence 3577888999654 4655565555555555889999987752 11111 3455677665443 34589999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+...|+.+ ++. ++++++ +++++
T Consensus 304 v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 953 455799999999999999 6678888 999988899976 554 566666 77777
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
+..++++.+.+ +....+++.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55455554433 567789999998887765
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.7e-12 Score=133.61 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=104.2
Q ss_pred CcEEEEEeccccc-------cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 400 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 400 ~~~i~~iGrl~~~-------Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
..++++.|++... +.++.+++++..+ ++++++++.+. ..+.++. .++++.. ...+. ..+|
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3578899998865 6677888888765 78888876542 2223322 3455766 44432 3589
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHH
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 546 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ 546 (609)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+...|+.+ ++. ++++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999863 3468999999999999998754 66667777788875 544 78999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
++++ ++.++++.+.+ +...-..+..++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9987 44444444433 333345555555444443
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-12 Score=136.28 Aligned_cols=156 Identities=14% Similarity=0.041 Sum_probs=103.2
Q ss_pred CcEEEEEecccccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~~K--g~~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
..++++.|+..... .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.||
T Consensus 248 ~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad 315 (415)
T 3rsc_A 248 PVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQAT 315 (415)
T ss_dssp CEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhCC
Confidence 35677888875432 244445554443 588877 565531 11111 245567765444433 5899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEc----CCCCcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
++|..+- ..+++|||++|+|+|+. +.....+.+.+...|..+ ... ++++++++|.+++++
T Consensus 316 ~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 381 (415)
T 3rsc_A 316 VCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAAD 381 (415)
T ss_dssp EEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHTC
T ss_pred EEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHcC
Confidence 9997642 36889999999999995 444566777777788865 554 899999999999997
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
++.+.++.+.+ +....+++..++.+++++.+
T Consensus 382 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 382 --PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp --HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 44444444332 45667888888877777653
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.1e-13 Score=142.97 Aligned_cols=190 Identities=19% Similarity=0.136 Sum_probs=133.1
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..+|.+++.++..++.+.+ .|++++ ++.++.|. +|...+. .....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchhHHHHH
Confidence 4689999999999999987 677766 78888874 3321110 011234567888
Q ss_pred hCCCCCCCCcEEEEEeccc---cccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHH-H-HhCCCceEEEeecCh
Q 007300 392 VGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGVAKFNI 465 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~v~~~~~~~~ 465 (609)
+|++. +..++++.+|.+ ..|+++.+++|+..+.+. ++++++... +...+.++++ . .....++.....+..
T Consensus 198 lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 99864 235666677754 347899999999998643 677777543 3355555554 2 111235766555666
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC-cccccccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
.+...+++.||+++.+| |.++.||+++|+|+|+..... .+|.++.| +++++ +.|.+++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv-----------~~d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS-----------GFKAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC-----------CSSHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc-----------CCCHHHHHHHH
Confidence 66778999999999776 567899999999999986543 57777665 56653 34899999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
.+++++
T Consensus 337 ~~ll~d 342 (385)
T 4hwg_A 337 KTITEE 342 (385)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 999987
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-10 Score=125.05 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=104.7
Q ss_pred cEEEEEecccc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 401 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 401 ~~i~~iGrl~~-----~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.++++.|++.. .|.++.+++++..+ ++++++++.+.. . +.++ ..+.++......+. ..+|..|
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~-~~l~----~~~~~v~~~~~~~~---~~ll~~a 336 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-L-EGVA----NIPDNVRTVGFVPM---HALLPTC 336 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-T-SSCS----SCCSSEEECCSCCH---HHHGGGC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-h-hhhc----cCCCCEEEecCCCH---HHHHhhC
Confidence 47788999875 48889999999876 688888766542 1 1111 23456765544443 3478999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
|++|.. +-+.+++|||++|+|+|+....+ ..+.+.+...|+.+ ++. ++++++++|.++++
T Consensus 337 d~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 337 AATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHhc
Confidence 999973 34579999999999999998743 56667777788875 544 88999999999998
Q ss_pred hhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 550 ~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
+ +..+.++.+.+ +....+.+.+++.+++++
T Consensus 403 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 403 D--PAHRAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp C--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 54444554433 456677777777766654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.4e-09 Score=113.25 Aligned_cols=156 Identities=10% Similarity=0.004 Sum_probs=97.3
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
..++++.|++. .+..+.+.++++.+.+.+++++ ++|.+... +.+ ...+.++......+.. .+|+.||++
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~~ 325 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASAF 325 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSEE
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCEE
Confidence 35777889887 4444444444444544577875 46765421 111 1245567655443433 589999998
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHhhC
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYG 552 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~ 552 (609)
|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+ +.. ++++++++|++++++
T Consensus 326 v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~-- 389 (424)
T 2iya_A 326 ITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD-- 389 (424)
T ss_dssp EECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC--
T ss_pred EECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC--
Confidence 8632 2378999999999999998643 44556666788865 444 889999999999987
Q ss_pred HHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 553 TQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 553 ~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
++.+.++.+.+ +...-..+..++.+++++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 390 PGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 44334443322 233444555555555544
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-09 Score=113.25 Aligned_cols=153 Identities=17% Similarity=0.140 Sum_probs=90.0
Q ss_pred cEEEEEecccccc-CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~K-g~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.+++..|++...+ +.+.+.+++..+.+.+.++++.+.+...- .....+.++......+.. .+|..+|++|
T Consensus 239 ~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~~~~~~v~~~~~~p~~---~lL~~~~~~v 309 (400)
T 4amg_A 239 RIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA------LLGELPANVRVVEWIPLG---ALLETCDAII 309 (400)
T ss_dssp EEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC------CCCCCCTTEEEECCCCHH---HHHTTCSEEE
T ss_pred EEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc------ccccCCCCEEEEeecCHH---HHhhhhhhee
Confidence 4666778876544 44556666666666678888776543100 011245567655444433 4789999988
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH-H
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 554 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~-~ 554 (609)
.- +-..+++|||++|+|+|+....+ ..+.+.+...|+.. +.. +..+++|+++++++.. +
T Consensus 310 ~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~~--~~~~~al~~lL~d~~~r~ 373 (400)
T 4amg_A 310 HH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EAG--SLGAEQCRRLLDDAGLRE 373 (400)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CTT--TCSHHHHHHHHHCHHHHH
T ss_pred cc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CCC--CchHHHHHHHHcCHHHHH
Confidence 42 34468999999999999965543 55566666677754 333 4467889999987321 1
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHH
Q 007300 555 ALAEMMKNGMAQDLSWKGPAKKWEE 579 (609)
Q Consensus 555 ~~~~~~~~~~~~~fs~~~~a~~~~~ 579 (609)
..+++++. +...=+....++.+++
T Consensus 374 ~a~~l~~~-~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 374 AALRVRQE-MSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHH-HHTSCCHHHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHH
Confidence 22222222 3333355555555544
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=2.8e-08 Score=105.65 Aligned_cols=157 Identities=13% Similarity=0.050 Sum_probs=98.8
Q ss_pred CcEEEEEeccc-cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~-~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+++++.|++. ..+.++.+++++..+ ++++++.+.... .. . ...+.++......+. ..++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~-~-----~~~~~~v~~~~~~~~---~~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG-R-----IDEGDDCLVVGEVNH---QVLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC-C-----SSCCTTEEEESSCCH---HHHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc-c-----ccCCCCEEEecCCCH---HHHHhhCcEE
Confidence 36778889988 667778888888776 677777654331 10 0 122456766544443 3478999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 554 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~ 554 (609)
|..+ -..++.||+++|+|+|+....+- .+.+.+...|..+ .....+.++++++|.++++ ++
T Consensus 289 v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l--------~~~~~~~~~l~~ai~~ll~---~~ 353 (404)
T 3h4t_A 289 VHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH--------DGPTPTVESLSAALATALT---PG 353 (404)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC--------SSSSCCHHHHHHHHHHHTS---HH
T ss_pred EECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc--------CcCCCCHHHHHHHHHHHhC---HH
Confidence 9653 22689999999999999876542 3345555677765 0122378999999999986 23
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 555 ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 555 ~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
..+++.+. .+.+.- .-+++..+.+++++..
T Consensus 354 ~~~~~~~~--~~~~~~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 354 IRARAAAV--AGTIRT-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHH--HTTCCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH--HHHHhh-hHHHHHHHHHHHHHhh
Confidence 33333332 233333 4455555555555543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-08 Score=111.84 Aligned_cols=177 Identities=12% Similarity=0.117 Sum_probs=120.4
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEE--EEeCCC---hhhHHHHHHHHHhCCCceEEEee
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGK---KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lv--ivG~g~---~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
..+|++.+.+.++++..+++ .|..+.+++++.++.+ ++..++ ++|.+. ....+.+.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567654445777777774 7999999999998876 665553 367432 2233334444433 46777777
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccc------cCcceeEecccccccccCCCCC
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 536 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~------~~~~G~l~~~~~~~~~~v~~~d 536 (609)
.+.++....|+.+|+++-|+.+++ |++.+|||++|+|||+....++..-+. -|-.+++ -..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~L-----------IA~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWL-----------IANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGG-----------EESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcce-----------ecCC
Confidence 777777779999999999998755 999999999999999987665554442 1223321 1357
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh-----hCCchHHHHHHHHHHHHHHH
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQ-----DLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~-----~fs~~~~a~~~~~~~~~l~~ 586 (609)
.+++++...++..+ ++.+.++.++.... -|+ ...++|++.|++++.
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 89999999999998 66677766554322 233 445666666666553
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.5e-08 Score=90.65 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=92.3
Q ss_pred CcEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--Hh
Q 007300 400 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 474 (609)
Q Consensus 400 ~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~ 474 (609)
..++++.|++. +.|.+..+++++..+ +.++++++++... ...+.++.+....+.. .++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCCC
Confidence 36888999985 678888888888766 5788887765421 1234567766555543 345 89
Q ss_pred CcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC----CcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHH
Q 007300 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 548 (609)
Q Consensus 475 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll 548 (609)
||++|.. +-+.+++|||++|+|+|+.... +..+.+.+...|+.+ ++. ++++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999974 3468999999999999999874 346677777889876 555 8899999999999
Q ss_pred Hh
Q 007300 549 AT 550 (609)
Q Consensus 549 ~~ 550 (609)
++
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.3e-06 Score=92.92 Aligned_cols=155 Identities=13% Similarity=0.055 Sum_probs=100.5
Q ss_pred CcEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 400 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 400 ~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
..++++.|++. ..+..+.+++++..+ +++++++ |.+... . ...+.++......+. ..++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 35778889985 567778888888776 5677765 665421 1 234556765544443 3578999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
|++|.- +-..+++||+++|+|+|+....+ ..+.+.+...|+.+ ..+..+.++++++|+++ ++
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~--------~~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH--------DGPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC--------SSSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC--------CCCCCCHHHHHHHHHHh-hC-
Confidence 999973 23469999999999999987643 44556666788865 01235789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHH-HHHHH
Q 007300 552 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLEV 586 (609)
Q Consensus 552 ~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~-~~l~~ 586 (609)
+..++++.+. .+.+....-+ +..+.+ +++..
T Consensus 370 -~~~~~~~~~~--~~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 370 -PETRARAEAV--AGMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp -HHHHHHHHHH--TTTCCCCHHH-HHHHHHHHHHHC
T ss_pred -HHHHHHHHHH--HHHHhhcCcH-HHHHHHHHHHhc
Confidence 4444444432 2333334444 556666 66654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-05 Score=85.58 Aligned_cols=155 Identities=17% Similarity=0.095 Sum_probs=105.4
Q ss_pred CcEEEEEecc-ccccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcE
Q 007300 400 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 400 ~~~i~~iGrl-~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
..++++.|++ ...+..+.+++++..+ +.+++++ |.+... . ...+.++......+.. .++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3678889998 4888888999999877 4566665 765421 0 1233456654444432 46899999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCC--CCHHHHHHHHHHHHHhh
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 551 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~--~d~~~la~~I~~ll~~~ 551 (609)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+ +. .+.++++++|.++ ++
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 99742 2369999999999999997654 55666666788865 43 3789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 552 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 552 ~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
+..++++.+ ..+.+....-+++..+.++++...
T Consensus 369 -~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 369 -PETHARATA--VAGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHH--HHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHH--HHHHHhhcChHHHHHHHHHHHHhc
Confidence 444444433 234456677777888888877654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0028 Score=72.03 Aligned_cols=182 Identities=13% Similarity=-0.019 Sum_probs=122.8
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC---CceEEEeec
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 463 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 463 (609)
|..+|||.+. ++++...+ ..|=.+..++++.++.+ ++.+|++..... ..++.+.+...+.+ +++.+....
T Consensus 514 R~~~gLp~~~--v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPEDA--IVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTTS--EEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCCC--EEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 6678898654 55544444 47777778888777766 899998887654 34556666666554 467777666
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---cceeEecccccccccCCCCCHHHH
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
+.++.-..+..+|+++=|.-+ +-|.+.+||+.+|+|||+-....+..=+... ..|+- ++ -..|.+++
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~--------e~-ia~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCL--------EL-IAKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCG--------GG-BCSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCc--------cc-ccCCHHHH
Confidence 766666789999999988766 4578999999999999987643322211100 01110 01 23678899
Q ss_pred HHHHHHHHHhhCHHHHHHHHH---HHHH--hhCCchHHHHHHHHHHHHHHHc
Q 007300 541 STTVRRALATYGTQALAEMMK---NGMA--QDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 541 a~~I~~ll~~~~~~~~~~~~~---~~~~--~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+...++..+ .+.+.++.+ +.+. .-|+-+..++.+++.|++++..
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 9888888887 444433322 2222 2589999999999999999875
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.061 Score=55.31 Aligned_cols=111 Identities=13% Similarity=0.126 Sum_probs=73.1
Q ss_pred HHHHhCCCCCCCCcEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEE-EeecC
Q 007300 388 LQAEVGLPVDRNIPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFN 464 (609)
Q Consensus 388 ~~~~~gl~~~~~~~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~ 464 (609)
+.++.|++.+. ..+++..|.-.+.|. .+.+.+.++.|.+.+.+++++|... ..+..+++....+.++.. .+..+
T Consensus 175 ~l~~~g~~~~~-~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~s 251 (349)
T 3tov_A 175 FYSSHGLTDTD-ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKFQ 251 (349)
T ss_dssp HHHHTTCCTTC-CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCCC
T ss_pred HHHHcCCCCCC-CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCCC
Confidence 44556765332 234455665445665 4678888888876688999888654 345556666555433333 23456
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
-.++..+++.||++|..- .|..-+ |.+.|+|+|+--.
T Consensus 252 l~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg 288 (349)
T 3tov_A 252 LGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYG 288 (349)
T ss_dssp HHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECS
T ss_pred HHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEEC
Confidence 667778999999999762 466666 8999999998643
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.032 Score=56.98 Aligned_cols=113 Identities=16% Similarity=0.161 Sum_probs=74.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEec-cccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCC----Cce
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 457 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGr-l~~~Kg~--~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v 457 (609)
.+.+++.+|++.+ ...+++..|. ..+.|.. +.+.++++.|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4566777787532 2245666676 5566654 488888888876689999988654 2344455544332 124
Q ss_pred EEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 458 RGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 458 ~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
... +..+-.++..+++.||++|... .|..-+ |.++|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 332 3345567778999999999875 455544 899999999864
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.092 Score=56.00 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=80.6
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.+.+..|.+... ..+.+.+.+..|.+.+.+|+++-.+.. ....-+.+..+.++++... .|-.+. .+++.+++.++
T Consensus 275 vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv-~w~Pq~--~vL~h~~v~~f 349 (454)
T 3hbf_A 275 VVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIV-AWAPQV--EILKHSSVGVF 349 (454)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEE-SSCCHH--HHHHSTTEEEE
T ss_pred eEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEE-eeCCHH--HHHhhcCcCeE
Confidence 455667776532 234444444444444677776543331 1111112223344556555 443332 58999997777
Q ss_pred cCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 481 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-++ +| .+++||+++|+|.|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 350 vtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 350 LTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred Eec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 666 66 48999999999999987543 33445553 6777541 0124689999999999976
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.062 Score=53.47 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=61.3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.++++.|..+...-.+.+++++... .. -.+|+|.+.+ ..+.+++...+.+ ++..+ .|. +.+..+|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~-~~~~l~~~~~~~~-~v~v~-~~~-~~m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNP-NLKKLQKFAKLHN-NIRLF-IDH-ENIAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCT-THHHHHHHHHTCS-SEEEE-ESC-SCHHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCch-HHHHHHHHHhhCC-CEEEE-eCH-HHHHHHHHHCCEEEE
Confidence 4566788766554344555555433 23 3466788765 3455555555444 45544 343 446679999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 3 46899999999999988653
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.14 E-value=0.22 Score=56.55 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=121.5
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.....|.+++.|+...+.+.+. ++++.+ .++..|. |..|... + .......++.+++
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~------PR~D~l~----~----~~~~~~~~~~~~~ 530 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRSA--FWMDEE--------RILEIGY------PRNDVLV----N----RANDQEYLDEIRT 530 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHHH--TCCCGG--------GEEESCC------GGGHHHH----H----STTCHHHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHHH--hCCCcc--------eEEEcCC------CchHHHh----c----ccchHHHHHHHHH
Confidence 3456899999999999988753 555433 3455554 2211100 0 0112234677889
Q ss_pred HhCCCCCCCCcEEEEEecccccc----C-----HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEe
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~K----g-----~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
.++++. ++++|+|.-.+.... | ...-++.+.+....++.|++-.- +...+.+. + ..+.+.+....
T Consensus 531 ~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~H--p~~~~~~~-~-~~~~~~~~~~~ 604 (729)
T 3l7i_A 531 HLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRMH--YLISNALD-L-SGYENFAIDVS 604 (729)
T ss_dssp HTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECCC--HHHHTTCC-C-TTCTTTEEECT
T ss_pred HhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEecC--cchhcccc-c-cccCCcEEeCC
Confidence 999874 558999998766531 1 11122333333234666665432 21111110 0 11222233222
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHH
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 541 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la 541 (609)
. .+.+.+++..||++|-= ++-+++|++..++|||--... ..+.. +...|+.+. +..+.--.-..+.++|.
T Consensus 605 ~--~~di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~~~D-~~~Y~-~~~rg~y~d-~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 N--YNDVSELFLISDCLITD-----YSSVMFDYGILKRPQFFFAYD-IDKYD-KGLRGFYMN-YMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp T--CSCHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEECTT-TTTTT-SSCCSBSSC-TTSSSSSCEESSHHHHH
T ss_pred C--CcCHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEecCC-HHHHh-hccCCcccC-hhHhCCCCeECCHHHHH
Confidence 2 23456789999999943 677899999999999977321 11111 111333221 00000000136789999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhhCCc--hHHHHHHHHHHHHHHH
Q 007300 542 TTVRRALATYGTQALAEMMKNGMAQDLSW--KGPAKKWEETLLNLEV 586 (609)
Q Consensus 542 ~~I~~ll~~~~~~~~~~~~~~~~~~~fs~--~~~a~~~~~~~~~l~~ 586 (609)
++|...... ...+.+..++...+-+.+ ...+++..+.+.+...
T Consensus 675 ~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 999887764 333333333333333333 3466666665554443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.19 Score=54.04 Aligned_cols=131 Identities=8% Similarity=-0.011 Sum_probs=77.4
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-----h-hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 474 (609)
.+++..|.+.. ...+.+.+.+..|.+.+.+++++-... . .+.+.+ ..+.++++.... |-... .+|+.
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~~~~v~~-~~pq~--~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF---TNEIADRGLIAS-WCPQD--KVLNH 369 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH---HHHHTTTEEEES-CCCHH--HHHTS
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH---HHhcCCCEEEEe-ecCHH--HHhcC
Confidence 45666777542 233444444444444577887653221 0 011122 122344565544 43333 38988
Q ss_pred CcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccc-cCcceeEecccccccccCCCCCHHHHHHHHHHHH
Q 007300 475 ADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548 (609)
Q Consensus 475 aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~-~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll 548 (609)
+++-++-++ +| .+++||+++|+|+|+-...+ ....+. +.+.|+.+. ..-+.+++.++|++++
T Consensus 370 ~~~~~~vth---~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 370 PSIGGFLTH---CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVI 437 (482)
T ss_dssp TTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHH
T ss_pred CCCCEEEec---CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHH
Confidence 887555554 44 58999999999999987643 233343 456777540 1247899999999999
Q ss_pred Hh
Q 007300 549 AT 550 (609)
Q Consensus 549 ~~ 550 (609)
++
T Consensus 438 ~~ 439 (482)
T 2pq6_A 438 AG 439 (482)
T ss_dssp TS
T ss_pred cC
Confidence 86
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.43 Score=51.14 Aligned_cols=138 Identities=10% Similarity=-0.003 Sum_probs=77.9
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCC-------------hhhHHHH-HHHHHhCCCceEEEeecCh
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-------------KPMEKQL-EQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~-------------~~~~~~l-~~l~~~~~~~v~~~~~~~~ 465 (609)
.+.+..|.+.. ...+.+.+.+..|.+.+.+++++ |.+. ..+...+ +....+..++-.....|-.
T Consensus 270 vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~P 348 (480)
T 2vch_A 270 VLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAP 348 (480)
T ss_dssp EEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCC
T ss_pred eEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccC
Confidence 56677788753 34455555555555557777765 4321 0010000 0111111111122232433
Q ss_pred HHHHHHHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccccccccCCCCCHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
.. .+|+.+++.++-++ +| .+++||+++|+|+|+-...+ ....+ ++-+.|..+.. ..+ ..-+.++
T Consensus 349 q~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~-~~~----~~~~~~~ 418 (480)
T 2vch_A 349 QA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA-GDD----GLVRREE 418 (480)
T ss_dssp HH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCC-CTT----SCCCHHH
T ss_pred HH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeec-ccC----CccCHHH
Confidence 32 58999998666665 55 48999999999999987643 33343 45567774400 000 0247899
Q ss_pred HHHHHHHHHH
Q 007300 540 VSTTVRRALA 549 (609)
Q Consensus 540 la~~I~~ll~ 549 (609)
++++|++++.
T Consensus 419 l~~av~~vl~ 428 (480)
T 2vch_A 419 VARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999997
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.4 Score=51.03 Aligned_cols=131 Identities=11% Similarity=-0.015 Sum_probs=74.1
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCCh-hhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCc
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GAD 476 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aD 476 (609)
.+++..|.+... ..+.+.+++..|.+.+++++++ |.... .+.+.+ ..+.+.++... .|-... .+|+ .+|
T Consensus 273 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~-~w~pq~--~vL~h~~~~ 345 (456)
T 2c1x_A 273 VVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVV-PWAPQA--EVLAHEAVG 345 (456)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEE-SCCCHH--HHHTSTTEE
T ss_pred eEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEe-cCCCHH--HHhcCCcCC
Confidence 456667776533 3344444444444345666654 43321 111111 11123345544 443332 4788 455
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
++| ++ +=..+++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 346 ~fv--th--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 346 AFV--TH--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEE--EC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred EEE--ec--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 665 33 23458999999999999987543 33455555 6777540 0123689999999999987
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=91.98 E-value=3 Score=44.23 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=73.8
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHH-HHHHHhCCCceEEEeecChHHHHHHHH--hCc
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQL-EQLEILYPEKARGVAKFNIPLAHMIIA--GAD 476 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aD 476 (609)
.+++..|.+...-+.+.+.+++..|.+.+.+++++ |.+.+.+.+.+ ++... ++++.... |-... .+|+ .+|
T Consensus 278 vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~v~~-w~pq~--~vL~h~~~~ 352 (463)
T 2acv_A 278 VVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMICG-WAPQV--EVLAHKAIG 352 (463)
T ss_dssp EEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEES-SCCHH--HHHHSTTEE
T ss_pred eEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEEEEc-cCCHH--HHhCCCccC
Confidence 46667777662234344444444444446777765 43311111111 11110 22354433 43332 3676 456
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-cccCcceeEec-ccccccccCC--CCCHHHHHHHHHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRAL 548 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-i~~~~~G~l~~-~~~~~~~~v~--~~d~~~la~~I~~ll 548 (609)
++|. + +=..+++||+++|+|+|+-...+ .... +++.+.|+.++ ... -. .-+.+++.++|++++
T Consensus 353 ~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 353 GFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp EEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHHT
T ss_pred eEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHHH
Confidence 6653 3 23458999999999999987643 3334 45666777531 000 01 247899999999999
Q ss_pred H
Q 007300 549 A 549 (609)
Q Consensus 549 ~ 549 (609)
+
T Consensus 424 ~ 424 (463)
T 2acv_A 424 D 424 (463)
T ss_dssp C
T ss_pred h
Confidence 6
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=87.90 E-value=2.5 Score=42.22 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=82.1
Q ss_pred cEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+++..|.-.+.|. .+.+.+.++.|.+.++++++.+.++ ...+..+++....+. +...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 45566666555565 4588888888877788988874333 233444555544443 4444455667777899999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc-CcceeEe-cccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~-~~~G~l~-~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|-.- .|..=+ |.+.|+|+|+--....+..... +.....+ +. .+ .+..=+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~--cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GN--ELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GG--CGGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--cc--cccCCCHHHHHHHHHHHHHH
Confidence 9763 455556 7779999988632221221111 1111111 10 01 12444678888888877753
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=85.58 E-value=0.92 Score=43.24 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=29.7
Q ss_pred HHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007300 466 PLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 507 (609)
Q Consensus 466 ~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 507 (609)
+.+..+|+ .||++|.= +=..+++|++++|+|.|.-...
T Consensus 123 ~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 123 TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 44556899 99999953 3456899999999999887653
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=85.52 E-value=7.8 Score=41.04 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=70.1
Q ss_pred EEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCCh------------------hhHHHHHHHHHhCCCceEEEeec
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------------------PMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~------------------~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
.+.++|. .+.++.+.+.+....++--+++|+|.|.- .-.+..++++.++++-+...+.-
T Consensus 211 ~v~~i~~---~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~ 287 (461)
T 4g65_A 211 EVFFVAA---SNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDA 287 (461)
T ss_dssp EEEEEEE---TTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCT
T ss_pred EEEEEec---cchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccc
Confidence 3455554 46677777777665444457888898751 23566777777777655555554
Q ss_pred -ChHHHH-HHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCC--CCccccccc
Q 007300 464 -NIPLAH-MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST--GGLVDTVEE 515 (609)
Q Consensus 464 -~~~~~~-~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~--gg~~e~i~~ 515 (609)
+.+.+. .=+..+|+++..... |.-=++.+-|-.+|++-+.+.. ....++++.
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~ 344 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQG 344 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCS
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhc
Confidence 333332 236889999987766 4444456678889998877754 344555544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 609 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-102 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 3e-38 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 3e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 316 bits (810), Expect = e-102
Identities = 161/497 (32%), Positives = 236/497 (47%), Gaps = 31/497 (6%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFT 61
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALSL 116
Query: 206 AALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHN 265
AA G + A+DW ++ P Y++ P+ + IHN
Sbjct: 117 AA-------ARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTIHN 164
Query: 266 IAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325
IA+QG+F F L LPA G ++++K G+ + + TVSP Y
Sbjct: 165 IAFQGQFGANIFSKLALPAHA-------FGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217
Query: 326 AQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 383
A+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A + + L
Sbjct: 218 AEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA-ANLKNRAL 275
Query: 384 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPME 443
K+A+ + D P+ I RL QKG D++A A+ + +++VLG G +E
Sbjct: 276 NKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALE 334
Query: 444 KQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV 503
L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+V
Sbjct: 335 GALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVV 394
Query: 504 ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKN 562
A TGGL DTV + + PV + + +RR + Y L +M K
Sbjct: 395 ARTGGLADTVIDANHAALASK-AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKL 453
Query: 563 GMAQDLSWKGPAKKWEE 579
GM D+SW+ A +
Sbjct: 454 GMKSDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 144 bits (363), Expect = 3e-38
Identities = 103/500 (20%), Positives = 181/500 (36%), Gaps = 84/500 (16%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
+L +G E P K GGL + L + ALA+ GH V+ P + +++ + +V
Sbjct: 2 KVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKI----RV 56
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
+ +V+ + + + + ++ +YGP + + +
Sbjct: 57 FGEEVQVKVSYEERGNLRIYRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGR 105
Query: 206 AALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHN 265
A++ L DVV +DWHT +K +K VF IH
Sbjct: 106 ASVLLLNDLLREEPL-----PDVVH-FHDWHTVFAGALIKKYFKI-------PAVFTIHR 152
Query: 266 IAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 325
+ AF + G ++ I+ G +D+V TVS Y
Sbjct: 153 LNKSKLPAF---------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGY 197
Query: 326 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385
+ + I + NG+D WN S + ++ K
Sbjct: 198 LIDEWG--------FFRNFEGKITYVFNGIDCSFWNE------------SYLTGSRDERK 237
Query: 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL----AAAIPHFIKENVQIIVLGTGKKP 441
++L ++ G+ IG R QKG D+L + ++ I++G G
Sbjct: 238 KSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE 295
Query: 442 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 501
+E LE + + + DF++IPS FEP GL+ L AM G +P
Sbjct: 296 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 355
Query: 502 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 561
I ++ GGL D + TG V D ++ + +AL L++ +
Sbjct: 356 IASAVGGLRDIITNE-TGI----------LVKAGDPGELANAILKALELS-RSDLSKFRE 403
Query: 562 NG--MAQDLSWKGPAKKWEE 579
N A SW+ A+++ +
Sbjct: 404 NCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 57.2 bits (137), Expect = 3e-09
Identities = 46/389 (11%), Positives = 103/389 (26%), Gaps = 86/389 (22%)
Query: 222 FSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLN 281
D++++ D+H L+ + ++ F +H
Sbjct: 119 LLQDDDIIWIH-DYHLLPFAHELRKRGV------NNRIGFFLHI---------------- 155
Query: 282 LPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 341
F + F P + + + + D++ + + + +
Sbjct: 156 ---PFPTPEIFN---ALPTY----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTT 205
Query: 342 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 401
K+ G + IG++ A PL + Q + +N+
Sbjct: 206 RSAKSHT---AWGKAFRTEVY----PIGIEPKEIAKQAAGPLPPKLAQLK---AELKNVQ 255
Query: 402 VIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPMEKQLEQLEILYPEKAR 458
I + RL+ KG A +++ Q I ++ + + +
Sbjct: 256 NIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLEN 315
Query: 459 GVAKFN-------------------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 499
+ N L I +D L+ + L+ +
Sbjct: 316 EAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD 375
Query: 500 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 554
V +++ G + + V+P D V+ + RAL T
Sbjct: 376 PANPGVLVLSQFAGAANELTSALI-------------VNPYDRDEVAAALDRAL-TMSLA 421
Query: 555 ALAEMMKNGMAQDLSWKGPAKKWEETLLN 583
+ K W+E ++
Sbjct: 422 ERISRHAEMLDV--IVKNDINHWQECFIS 448
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 52.5 bits (124), Expect = 2e-08
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 354 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE-Q 412
G+D WN S + ++ K++L ++ G+ FIGR + Q
Sbjct: 1 GIDCSFWNE------------SYLTGSRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQ 45
Query: 413 KGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 468
KG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFV 105
Query: 469 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 528
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D +
Sbjct: 106 RELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET----------- 154
Query: 529 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 570
V D ++ + +AL L++ +N + +S+
Sbjct: 155 GILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 609 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.91 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.87 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.54 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.48 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.23 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.83 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.78 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.76 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.45 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.44 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.17 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.09 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.76 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.69 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.6 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 96.77 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 90.26 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 87.65 | |
| d2d1pa1 | 128 | tRNA 2-thiouridine synthesizing protein D, TusD {E | 81.94 | |
| d2hy5a1 | 130 | Sulfurtransferase DsrE {Chromatium vinosum [TaxId: | 81.07 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 80.51 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=4.6e-59 Score=508.48 Aligned_cols=464 Identities=34% Similarity=0.543 Sum_probs=384.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|+.+|+|+.++||+|+++.+|+++|+++||+|+||||.|+...+.+................++.++...+|+++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 99999999999987899999999999999999999999999999877665544433322223333456778888999999
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+++++|.++.+. ..+|....+.+|.++..+|..+++++.++++.... ..+|||| |+|+|++++.+.++
T Consensus 81 ~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~pDIv-H~h~~~~~l~~~~~ 148 (477)
T d1rzua_ 81 LILDAPAYYERS-----GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP------GWRPDMV-HAHDWQAAMTPVYM 148 (477)
T ss_dssp EEEECHHHHCSS-----SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSS------SCCCSEE-EEEHHHHTTHHHHH
T ss_pred EEecChhhcccC-----CCcccCcccccccccHHHHHHHHHHHHhhhhhccc------CCCCCEE-EecchhHHHHHHHH
Confidence 999999887653 24666777888999999999999998887766421 1269999 99999999999888
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+.... .++|+|+|+|+..++..++...+..++.+..+...- .......+.+++..+..+|.++++|+.
T Consensus 149 ~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ad~~~~vs~~ 216 (477)
T d1rzua_ 149 RYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME-------GIEYYNDVSFLKGGLQTATALSTVSPS 216 (477)
T ss_dssp HHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTT-------TTEETTEEEHHHHHHHHCSEEEESCHH
T ss_pred HHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhcccc-------cccccchhHHHHHHHHhhhhhhhccHH
Confidence 76543 689999999999988888887777777655443210 011123456788889999999999999
Q ss_pred HHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 325 YAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+++++.. ..++...+.+. +..++.+|+||+|.+.|+|...+.|+..++.+.. ......+..++...+++. ++.++
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 293 (477)
T d1rzua_ 217 YAEEILT-AEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD-DGSPL 293 (477)
T ss_dssp HHHHTTS-HHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC-SSSCE
T ss_pred HHHHHHH-HhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhH-HHhhhhHHHHHHhccccc-CCccE
Confidence 9998764 22233222222 2348999999999999999988888887766653 455667778888899874 46789
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecC
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 482 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS 482 (609)
|+|+||+.++||++.|++|++++.+.+.+|+++|.|+......+.++...+++++.+.+.++.+....++++||++|+||
T Consensus 294 i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS 373 (477)
T d1rzua_ 294 FCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPS 373 (477)
T ss_dssp EEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECC
T ss_pred EEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCc
Confidence 99999999999999999999998888999999999998788888888888888999999999999989999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEcCCCCcccccccCc---------ceeEecccccccccCCCCCHHHHHHHHHHHHHhh-C
Q 007300 483 RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-G 552 (609)
Q Consensus 483 ~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~---------~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~-~ 552 (609)
++|+||++++|||+||+|||+|++||++|+|.|+. +|+++ ++.|+++|+++|.++++.+ +
T Consensus 374 ~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~~~~ 443 (477)
T d1rzua_ 374 RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYYHD 443 (477)
T ss_dssp SCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHHHTC
T ss_pred cccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEe----------CCCCHHHHHHHHHHHHhhhCC
Confidence 99999999999999999999999999999998864 89987 9999999999999998754 3
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++.+++|++++++++|||+.++++|+++|++++
T Consensus 444 ~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~~ll 476 (477)
T d1rzua_ 444 PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476 (477)
T ss_dssp HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 688999999999999999999999999999986
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=1.7e-45 Score=393.73 Aligned_cols=425 Identities=24% Similarity=0.342 Sum_probs=311.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
||||+|+.+|+| .++||+++++..|+++|+++||+|+|+||.|+..... ....+........+........++.+
T Consensus 1 MkIl~~~~~~pP-~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (437)
T d2bisa1 1 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYEERGNLRI 75 (437)
T ss_dssp CEEEEECSCCTT-CCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCE----EEEEEECSSSEEEEEEEEEEETTEEE
T ss_pred CEEEEECCccCC-cccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchh----hccceeecccccceeeeeeccCCeEE
Confidence 999999999988 4679999999999999999999999999998765432 22333333333444555566778888
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+++..+.+... ..|.+ .|.....++..+++.....+..+... ...|||| |+|+|++++++.++
T Consensus 76 ~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~pDiI-h~~~~~~~~~~~~~ 138 (437)
T d2bisa1 76 YRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE-----EPLPDVV-HFHDWHTVFAGALI 138 (437)
T ss_dssp EEEESSGGGCS-------CTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTS-----SCCCSEE-EEETGGGHHHHHHH
T ss_pred EecCccccccc-------ccccc----chhhHHHHHHHHHHHHHHHHHHHHhc-----CCCCCEE-EECChhhhhHhhhh
Confidence 88876544321 22211 12333344445555555544443211 2258999 99999998888777
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHH
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 324 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~ 324 (609)
+.. .++|+++++|+..+.. ++...+...+++.. ........++.....+|.++++++.
T Consensus 139 ~~~-------~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~d~v~~~~~~ 196 (437)
T d2bisa1 139 KKY-------FKIPAVFTIHRLNKSK-LPAFYFHEAGLSEL--------------APYPDIDPEHTGGYIADIVTTVSRG 196 (437)
T ss_dssp HHH-------HCCCEEEEESSCCCCC-EEHHHHHHTTCGGG--------------CCSSEECHHHHHHHHSSEEEESCHH
T ss_pred hcc-------ccCceeEEEeeccccc-cchhhhhhccchhh--------------hhHHHHHHHHHHHHhhhhhcccchh
Confidence 765 5899999999876522 22111111221111 1122345667778899999999999
Q ss_pred HHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEE
Q 007300 325 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 404 (609)
Q Consensus 325 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~ 404 (609)
.+.+.... ++.. ..++.+|+||+|.+.|.|...+ ..+...+..++.++++. +.++++
T Consensus 197 ~~~~~~~~--~~~~------~~ki~vi~~g~d~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~~i~ 253 (437)
T d2bisa1 197 YLIDEWGF--FRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVTFM 253 (437)
T ss_dssp HHHHTHHH--HGGG------TTTEEECCCCCCTTTSCGGGCC------------SCHHHHHHHHHHHTTCC---SCEEEE
T ss_pred hhhhhhhh--hccc------cCceEEEecccccccccccccc------------hhhHHHHHhhhhhhhcc---CCceEE
Confidence 88765531 2222 2389999999999988764321 23344566788888876 457999
Q ss_pred EEeccc-cccCHHHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 405 FIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 405 ~iGrl~-~~Kg~~~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
|+||+. ++||++.+++|+..+.. ++++|+|+|.|++..+..++.+....+..+.+....+.+.+..+++.||+++
T Consensus 254 ~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v 333 (437)
T d2bisa1 254 FIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVI 333 (437)
T ss_dssp EESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEE
T ss_pred EeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhcccc
Confidence 999997 57999999999998743 5899999999987778888888777776555545557888889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
+||..|++|++++|||+||+|||+|+.||..|++++ .+|+++ ++.|+++++++|.+++++. ++.+++|
T Consensus 334 ~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~----------~~~d~~~la~~i~~ll~~~-~~~~~~~ 401 (437)
T d2bisa1 334 IPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDLSKF 401 (437)
T ss_dssp ECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHTTT-TSCTHHH
T ss_pred ccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 999999999999999999999999999999999886 589987 9999999999999999742 3344444
Q ss_pred HHHH--HHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 560 MKNG--MAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 560 ~~~~--~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
++++ ..++|||+.++++|+++|++++.+.
T Consensus 402 ~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 402 RENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhH
Confidence 4444 2467999999999999999987543
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-35 Score=302.57 Aligned_cols=229 Identities=14% Similarity=0.168 Sum_probs=180.7
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHh
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 392 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (609)
..++.+++.++...+.+.+. ++.+.+ ++.+|+||+|.+.+.+... +..++.++..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~--~~~~~~------~i~vi~~gv~~~~~~~~~~----------------~~~~~~~r~~~ 189 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKN 189 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHT
T ss_pred ccCceEEEecHHHHHHHHHh--cCCCcc------eEEEEEeecccccccccCc----------------hhhhhhhhhcc
Confidence 35789999999988887752 454444 8999999999876644321 23467888999
Q ss_pred CCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHH
Q 007300 393 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLA 468 (609)
Q Consensus 393 gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 468 (609)
|++.+ .++++++||+.++||++.+++|++++.+ ++..++++|+++ ..+.++++..+++ +++.+.+. .+++
T Consensus 190 ~~~~~--~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~ 263 (370)
T d2iw1a1 190 GIKEQ--QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQD--KPRKFEALAEKLGVRSNVHFFSG--RNDV 263 (370)
T ss_dssp TCCTT--CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSS--CCHHHHHHHHHHTCGGGEEEESC--CSCH
T ss_pred CCCcc--ceEEEEEeccccccchhhhcccccccccccccceeeeccccc--ccccccccccccccccccccccc--cccc
Confidence 98854 4899999999999999999999999976 456666666544 1233444444433 35666553 2346
Q ss_pred HHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHH
Q 007300 469 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548 (609)
Q Consensus 469 ~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll 548 (609)
..+|+.||++++||+.|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++
T Consensus 264 ~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~---------~~~~d~~~la~~i~~ll 334 (370)
T d2iw1a1 264 SELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKAL 334 (370)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE---------CSSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEE---------cCCCCHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999999764 47899999999999999
Q ss_pred HhhCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHH
Q 007300 549 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 549 ~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~ 582 (609)
++ ++.+.+|++++. .+.|+|..+.+++.++|.
T Consensus 335 ~d--~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 335 TQ--SPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HC--HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 98 777777777663 567888888888888875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=1.1e-25 Score=214.21 Aligned_cols=189 Identities=28% Similarity=0.452 Sum_probs=157.1
Q ss_pred CCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccc-cccCHHHHHHHHhhccc----C
Q 007300 354 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK----E 428 (609)
Q Consensus 354 Gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~-~~Kg~~~ll~a~~~l~~----~ 428 (609)
|||.+.|.|... ...+...+..+++++|++ +.++|+|+||+. ++||++.+++|++.+.+ +
T Consensus 1 gid~~~~~~~~~------------~~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~ 65 (196)
T d2bfwa1 1 GIDCSFWNESYL------------TGSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 65 (196)
T ss_dssp CCCTTTSSGGGS------------CSCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred CcChhhcCCCCC------------CchhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC
Confidence 789998877632 123455677889999997 557899999997 68999999999999853 5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 508 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 508 (609)
+++|+|+|+|.+.++..++.+...+++.+......+.+.+..+|+.||++++||+.|+||++++|||+||+|||+++.|+
T Consensus 66 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 66 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred CeEEEEEeecccchhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 89999999998778888888888877655555556788888999999999999999999999999999999999999999
Q ss_pred cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCC
Q 007300 509 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 569 (609)
Q Consensus 509 ~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs 569 (609)
+.|++.+ .+|+++ ++.|+++++++|.++++. ..+.+.++++++. ..+||
T Consensus 146 ~~e~i~~-~~g~~~----------~~~~~~~l~~~i~~~l~~-~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-ETGILV----------KAGDPGELANAILKALEL-SRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-CceeeE----------CCCCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCC
Confidence 9998876 589987 999999999999999974 2556667766664 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3.2e-23 Score=222.07 Aligned_cols=294 Identities=14% Similarity=0.096 Sum_probs=209.0
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| +.|||+..++|.+++... ++.++++.+|...+.. ..|..+ ...
T Consensus 123 ~d~i-wvhDyhl~llp~~lR~~~------~~~~i~~flH~pfP~~----~~fr~l----------------------p~~ 169 (456)
T d1uqta_ 123 DDII-WIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNAL----------------------PTY 169 (456)
T ss_dssp TCEE-EEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTTS----------------------TTH
T ss_pred CCeE-EEeccchhhhHHHHHHhC------CCCcEEEEeCCCCCCh----HHhccC----------------------cch
Confidence 4888 999999999999999875 7899999999643310 001100 112
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccch--hh----hccCCeeEecCCCCCCCcCCCCccccccccCcchh
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 377 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~~----~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~ 377 (609)
..+..++..+|.|.+.+..+++.+..... .+.... .. -+..++.++|+|+|++.|.+....
T Consensus 170 ~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~----------- 238 (456)
T d1uqta_ 170 DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG----------- 238 (456)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS-----------
T ss_pred HHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhccc-----------
Confidence 44556778999999999999887764110 111100 00 012378899999998877432110
Q ss_pred cccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCCh-------hhHH
Q 007300 378 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKK-------PMEK 444 (609)
Q Consensus 378 ~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~~-------~~~~ 444 (609)
.......+++.+++ ++++|+++||+++.||++.+++|++++.+ + ++.++++|.+.. .+..
T Consensus 239 --~~~~~~~~l~~~~~-----~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ 311 (456)
T d1uqta_ 239 --PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 311 (456)
T ss_dssp --CCCHHHHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHH
T ss_pred --HHHHHHHHHHHhcC-----CCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHH
Confidence 01112344555553 66899999999999999999999999865 2 577888877641 2334
Q ss_pred HHHHHHHhC---------CCceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCc-----eEEcCCCCcc
Q 007300 445 QLEQLEILY---------PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-----PIVASTGGLV 510 (609)
Q Consensus 445 ~l~~l~~~~---------~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~P-----vI~s~~gg~~ 510 (609)
.+.++..+. ...+......+.+++..+|+.||++++||.+|+||++.+|||+||+| +|+|+.+|..
T Consensus 312 ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~ 391 (456)
T d1uqta_ 312 QLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 391 (456)
T ss_dssp HHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG
T ss_pred HHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH
Confidence 444443321 12344455567888889999999999999999999999999999999 8999999999
Q ss_pred cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHH
Q 007300 511 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 511 e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l 584 (609)
+.+.+ |+++ +|.|++++|++|.++|+++ .++++++.++. ....||+...++.+++.++++
T Consensus 392 ~~l~~---g~lV----------nP~d~~~~A~ai~~aL~~~-~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 392 NELTS---ALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp GTCTT---SEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHhCC---eEEE----------CcCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 99964 7876 9999999999999999873 34444444433 235699998888888888764
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=1.7e-21 Score=179.78 Aligned_cols=138 Identities=15% Similarity=0.218 Sum_probs=121.3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
..++|+||+.++||++.+++|++++ ++.+++|+|.+. +..+...+++.....+++.+.+..+.+++..+|+.||++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 90 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL 90 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence 4578999999999999999999998 577899999765 344555555555556689998888999999999999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
++||+.|+||++++|||++|+|||+++.++..|++.++.+|++. +.|+++++++|.++++++
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~-----------~~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-----------NADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-----------CSCHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccccccccceeecCCcceeeecCCcccccC-----------CCCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999974 458999999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=1.6e-12 Score=143.41 Aligned_cols=295 Identities=16% Similarity=0.151 Sum_probs=188.7
Q ss_pred CceEEEecccccchHHHH-HHHhhcCCCc-------ccCceEEEEEecCccCCc--cccccccccCCccc----------
Q 007300 226 YDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQ---------- 285 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~-l~~~~~~~~~-------~~~~~~v~~iH~~~~~~~--~~~~~~~~l~~~~~---------- 285 (609)
++++ |.|+-|.+++..- ++......++ .....++||.|.+.+.|. |+.+.+..+ +|+.
T Consensus 300 ~~vi-hlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~-l~~~~~~i~~i~~~ 377 (796)
T d1l5wa_ 300 YEVI-QLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHMQIINEINTR 377 (796)
T ss_dssp HEEE-EEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred hhhh-hcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHH-hHHHHHHHhHhhHH
Confidence 5777 9999998877553 4332222221 135678999999877663 443332211 0100
Q ss_pred cccccccccCC-------CCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCC
Q 007300 286 FKSSFDFIDGY-------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 358 (609)
Q Consensus 286 ~~~~~~~~~~~-------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~ 358 (609)
|........+- ........+++...++..|..+..||.-..+.+++...... .-+-+.++.-|.|||+..
T Consensus 378 fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~---~~~~p~~i~~ITNGVh~~ 454 (796)
T d1l5wa_ 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEY---HQLWPNKFHNVTNGITPR 454 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHH---HHHCGGGEEECCCCBCHH
T ss_pred HHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHhhhhc---cccCCcccccccccccHH
Confidence 00000000000 00011235677788899999999999998887665221000 001123899999999988
Q ss_pred CcCCCCcc--------ccccc-------------cCc-----chhcccchHHH----HHHHHHhCCCCCCCCcEEEEEec
Q 007300 359 EWNPLTDK--------YIGVK-------------YDA-----STVMDAKPLLK----EALQAEVGLPVDRNIPVIGFIGR 408 (609)
Q Consensus 359 ~~~p~~~~--------~~~~~-------------~~~-----~~~~~~~~~~~----~~~~~~~gl~~~~~~~~i~~iGr 408 (609)
.|-....+ ++... +.. ..+.+.+...+ +.++.+.|...+++...++|+-|
T Consensus 455 ~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRR 534 (796)
T d1l5wa_ 455 RWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKR 534 (796)
T ss_dssp HHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESC
T ss_pred HHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhh
Confidence 87432111 11100 000 11222222223 33456778888889999999999
Q ss_pred cccccCHHHHHHHHh----hccc------CCeEEEEEeCCCh------hhHHHHHHHHH---hCC-----CceEEEeecC
Q 007300 409 LEEQKGSDILAAAIP----HFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP-----EKARGVAKFN 464 (609)
Q Consensus 409 l~~~Kg~~~ll~a~~----~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~-----~~v~~~~~~~ 464 (609)
+.++|..++++.-+. .|.. .+++||+.|.-.+ .+.+.+.+++. ..+ .+|++...|+
T Consensus 535 fa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYd 614 (796)
T d1l5wa_ 535 LHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYC 614 (796)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCC
T ss_pred hhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCc
Confidence 999999988544333 3332 2689999998543 34444444443 122 1688999999
Q ss_pred hHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEeccc
Q 007300 465 IPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 525 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~~~ 525 (609)
...+..++++|||.+..++. |++|.+-+-||..|.+.+++--|...|+.++ +.|||+||..
T Consensus 615 v~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~~ 679 (796)
T d1l5wa_ 615 VSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHT 679 (796)
T ss_dssp HHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred hHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecCc
Confidence 99999999999999999875 9999999999999999999999999998875 7899999843
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.48 E-value=7.9e-12 Score=137.83 Aligned_cols=297 Identities=18% Similarity=0.139 Sum_probs=191.4
Q ss_pred CceEEEecccccchHHH-HHHHhhcCCCc-------ccCceEEEEEecCccCCc--cccccccccCCcc----------c
Q 007300 226 YDVVFVANDWHTSLIPC-YLKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPA----------Q 285 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-------~~~~~~v~~iH~~~~~~~--~~~~~~~~l~~~~----------~ 285 (609)
++++ |.||-|.+++.. +++......++ .....++||.|.+.+.|. |+.+.+..+ +|+ +
T Consensus 321 ~~vi-hlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~-lpr~~~ii~ei~~~ 398 (824)
T d2gj4a1 321 KVAI-QLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQR 398 (824)
T ss_dssp HEEE-EEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred ccee-eccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHH-hHHHhhhhhhhHHH
Confidence 3566 999999987755 44433322222 123568999999877663 444333221 010 1
Q ss_pred cccccccccC----------CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC
Q 007300 286 FKSSFDFIDG----------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355 (609)
Q Consensus 286 ~~~~~~~~~~----------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv 355 (609)
|...+....+ ....-....+++...++..|..+-.||.-..+.+++..... -..+.+.++.-|.|||
T Consensus 399 fl~~~~~~~~~d~~~~~~l~ii~e~~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~---~~~~~p~ki~~iTNGV 475 (824)
T d2gj4a1 399 FLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKD---FYELEPHKFQNKTNGI 475 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHH---HHHHCGGGEEECCCCB
T ss_pred HHHHHHHHCCCcHHHHhhcccccccCCceeeHHHHHHHhchhHHHHHHHHHHHHHHhhccc---cccCCCcceecccCcc
Confidence 1000000000 00000113467778889999999999999888877632110 0012234899999999
Q ss_pred CCCCcCCCCcccccc---------------------ccCcc-----hhcccchHHHH----HHHHHhCCCCCCCCcEEEE
Q 007300 356 DVQEWNPLTDKYIGV---------------------KYDAS-----TVMDAKPLLKE----ALQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 356 d~~~~~p~~~~~~~~---------------------~~~~~-----~~~~~~~~~~~----~~~~~~gl~~~~~~~~i~~ 405 (609)
+...|-....+.+.. ++-.+ .+...+...+. .++++.|...+++...+++
T Consensus 476 ~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~ 555 (824)
T d2gj4a1 476 TPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp CTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred cCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhh
Confidence 999985432111111 01001 12233333443 3556778888899999999
Q ss_pred EeccccccCHHHHH----HHHhhccc------CCeEEEEEeCCCh------hhHHHHHHHHH---hCC-----CceEEEe
Q 007300 406 IGRLEEQKGSDILA----AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEI---LYP-----EKARGVA 461 (609)
Q Consensus 406 iGrl~~~Kg~~~ll----~a~~~l~~------~~~~lvivG~g~~------~~~~~l~~l~~---~~~-----~~v~~~~ 461 (609)
+-|+.++|...+.+ ..+.++++ .+++||+.|.-.+ .+.+.+.+++. ..+ .+|++..
T Consensus 556 arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFle 635 (824)
T d2gj4a1 556 VKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET
T ss_pred eeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcC
Confidence 99999999998833 22344433 3789999998542 34444554443 122 2688999
Q ss_pred ecChHHHHHHHHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEeccccc
Q 007300 462 KFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSV 527 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~~~~~ 527 (609)
.|+...+..++.+||+.+..|+. |++|.+-+-+|..|.+.+++--|...|+.++ +.|||.||....
T Consensus 636 nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ 705 (824)
T d2gj4a1 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVE 705 (824)
T ss_dssp TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHH
T ss_pred CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCChh
Confidence 99999999999999999999875 9999999999999999999999999998875 789999985443
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.83 E-value=3.9e-08 Score=100.14 Aligned_cols=80 Identities=23% Similarity=0.179 Sum_probs=59.0
Q ss_pred CCceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccccccCcceeEeccc
Q 007300 454 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSF 525 (609)
Q Consensus 454 ~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~i~~~~~G~l~~~~ 525 (609)
+.++......+.. .+++.+|++|..+- ..++.|||++|+|+|+....+ ..+.+.+.+.|..+
T Consensus 269 ~~~v~i~~~~p~~---~ll~~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l--- 338 (391)
T d1pn3a_ 269 GADCFVVGEVNLQ---ELFGRVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV--- 338 (391)
T ss_dssp CTTCCEESSCCHH---HHHTTSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE---
T ss_pred CCCEEEecccCHH---HHHhhccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc---
Confidence 3456655554433 47899999997743 368999999999999987544 35566666778865
Q ss_pred ccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 526 SVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 526 ~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
+.. ++++++++|++++++
T Consensus 339 -------~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 339 -------DGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp -------CCSSCCHHHHHHHHHHHTST
T ss_pred -------CcCCCCHHHHHHHHHHHhCH
Confidence 444 489999999999964
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.78 E-value=1.2e-07 Score=96.87 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=72.3
Q ss_pred CCCceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccc
Q 007300 453 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVD 528 (609)
Q Consensus 453 ~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~ 528 (609)
.+.++.....++.. .++..+|++|. .+-..++.||+++|+|+|+....+ ..+.+++.+.|..+
T Consensus 284 ~~~~v~~~~~~p~~---~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l------ 350 (401)
T d1rrva_ 284 DRDDCFAIDEVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH------ 350 (401)
T ss_dssp CCTTEEEESSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC------
T ss_pred CCCCEEEEeccCcH---HHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc------
Confidence 35567665555533 47899999994 556689999999999999987665 45666666778865
Q ss_pred cccCCCC--CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 529 CEAVDPV--DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 529 ~~~v~~~--d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+.. ++++|+++|++++++ + +.+.+++ +.+.+.- .-+.+-.+++++++
T Consensus 351 ----~~~~~~~~~L~~ai~~vl~~---~-~r~~a~~-~~~~~~~-~g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 351 ----DGPTPTFESLSAALTTVLAP---E-TRARAEA-VAGMVLT-DGAAAAADLVLAAV 399 (401)
T ss_dssp ----SSSCCCHHHHHHHHHHHTSH---H-HHHHHHH-HTTTCCC-CHHHHHHHHHHHHH
T ss_pred ----CcCCCCHHHHHHHHHHHhCH---H-HHHHHHH-HHHHHhh-cCHHHHHHHHHHHh
Confidence 454 589999999999953 2 2222222 2333432 33455555555544
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.76 E-value=3e-07 Score=92.18 Aligned_cols=161 Identities=12% Similarity=0.026 Sum_probs=88.1
Q ss_pred cEEEEEe-ccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIG-RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iG-rl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
..++.+| ......-.+.+.+.+..+.. ....++++.............. ..+.++..+ .|.. .+..+|+.||+++
T Consensus 178 ~~i~~~~gs~g~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~v~-~f~~-~~~~lm~~adl~I 253 (351)
T d1f0ka_ 178 VRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQQSVEQAYAE-AGQPQHKVT-EFID-DMAAAYAWADVVV 253 (351)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTCHHHHHHHHHH-TTCTTSEEE-SCCS-CHHHHHHHCSEEE
T ss_pred cccccccccchhhhhHHHHHHhhhhhcc-cceeeeeccccchhhhhhhhcc-cccccceee-eehh-hHHHHHHhCchhh
Confidence 4554544 43333334555556666533 3334444444322332333332 333334332 3433 3556899999998
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCC---C----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTG---G----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~g---g----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
.- +=+.++.||+++|+|+|+-... + .++.+++.+.|+.+ +.. +.+.+.++|..+
T Consensus 254 t~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~----------~~~~~~~e~l~~~l~~l--- 316 (351)
T d1f0ka_ 254 CR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII----------EQPQLSVDAVANTLAGW--- 316 (351)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHTC---
T ss_pred cc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe----------chhhCCHHHHHHHHHhh---
Confidence 43 2347899999999999986432 2 23455555677754 332 356676666554
Q ss_pred hCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 551 ~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
..+.+.+|++++.. +.-..-+++..+.++++.
T Consensus 317 -~~~~~~~~~~~~~~--~~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 317 -SRETLLTMAERARA--ASIPDATERVANEVSRVA 348 (351)
T ss_dssp -CHHHHHHHHHHHHH--TCCTTHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHc--cCCccHHHHHHHHHHHHH
Confidence 25567778776543 333344556666665554
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.45 E-value=2.5e-06 Score=86.32 Aligned_cols=122 Identities=16% Similarity=0.110 Sum_probs=76.1
Q ss_pred cEEEEEeccc-cccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~-~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.++...|... ..+..+.+++++..+ +..++++ |..... ....+.++......+.. .+|..+|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~--------~~~~~~nv~~~~~~p~~---~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV--------LPDDGADCFAIGEVNHQ---VLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC--------CSSCGGGEEECSSCCHH---HHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCccc--------cccCCCCEEEEeccCHH---HHHhhcCEE
Confidence 3444444443 345556666666655 3344443 332210 11123456655544432 478999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
| ..+-..++.||+++|+|+|+....+ ..+.+++.+.|..+ +.. ++++++++|.+++++
T Consensus 306 V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l----------~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 306 I----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp E----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHHTSH
T ss_pred E----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 9 4567789999999999999976544 45556666678865 443 689999999999964
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.44 E-value=3.2e-05 Score=78.44 Aligned_cols=225 Identities=12% Similarity=0.042 Sum_probs=145.9
Q ss_pred HHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 308 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 308 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.|..+ +.||..++.++..++.+.+ .|.++. +|.++-+. +|. ...
T Consensus 136 ~R~~iskls~~hf~~t~~~~~~L~~---~Ge~~~------~I~~vG~p~~D~-------------------------i~~ 181 (373)
T d1v4va_ 136 NRRLTDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDA-------------------------VLL 181 (373)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHH-------------------------HHH
T ss_pred hhhhhccccceeeecchhhhhhhhh---hccccc------ceeecccchhhH-------------------------HHh
Confidence 34444 3699999999999999997 777765 56555432 110 000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
..-..........+.++++.+-|-+..+....+.+++..+.+ .++.+++...........+.+..... .++..+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~~~l 260 (373)
T d1v4va_ 182 AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDPL 260 (373)
T ss_dssp HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCC
T ss_pred hhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceeeccc
Confidence 000001111112244677778887777777888888887765 57777766554444444444444433 357777777
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHH
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 542 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~ 542 (609)
.....-.++..|++++-- .|-.+.||..+|+|+|.- +.|.-++.++.+.+ .+ ...|.+++.+
T Consensus 261 ~~~~~l~ll~~s~~vign-----Sssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vl-----------v~~d~~~I~~ 323 (373)
T d1v4va_ 261 EYGSMAALMRASLLLVTD-----SGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KL-----------AGTDPEGVYR 323 (373)
T ss_dssp CHHHHHHHHHTEEEEEES-----CHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EE-----------CCSCHHHHHH
T ss_pred hHHHHHHHhhhceeEecc-----cchhhhcchhhcCcEEEeCCCccCHHHHhcCee-EE-----------cCCCHHHHHH
Confidence 888777789999998844 566788999999999988 45666676666544 33 4568999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 543 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 543 ~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+|..++.+ ...+.++.. ....|.=-..+++..+.+.+-+...
T Consensus 324 ~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~~~~~~ 365 (373)
T d1v4va_ 324 VVKGLLEN--PEELSRMRK--AKNPYGDGKAGLMVARGVAWRLGLG 365 (373)
T ss_dssp HHHHHHTC--HHHHHHHHH--SCCSSCCSCHHHHHHHHHHHHTTSS
T ss_pred HHHHHHcC--HHHHhhccc--CCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 99999987 555444433 1234544556777777777666443
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.17 E-value=0.00053 Score=69.26 Aligned_cols=273 Identities=15% Similarity=0.098 Sum_probs=144.4
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+|++.-|-...+++++.... .++|++ ++|. |....+. ..+.|
T Consensus 88 kpD~v~v~GDr~e~la~a~aa~~-------~~Ipi~-Hieg----G~~s~~~--~~~~~--------------------- 132 (377)
T d1o6ca_ 88 KPDIVLVHGDTTTTFAGSLAAFY-------HQIAVG-HVEA----GLRTGNK--YSPFP--------------------- 132 (377)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHH-------TTCEEE-EESC----CCCCSCT--TTTTT---------------------
T ss_pred ccceeEeeecccccchhhhhhhh-------ccceEE-EEec----ccccccc--cccCc---------------------
Confidence 59999555565666655555544 589975 4442 2111100 00111
Q ss_pred hHHHHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccch
Q 007300 305 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 382 (609)
Q Consensus 305 ~~~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 382 (609)
-...|..+ ..||..++.++..++.+.+ .|.+.+ +|.++-|. +|.-........ .
T Consensus 133 de~~R~~iskls~~hf~~t~~~~~~L~~---~G~~~~------~I~~vG~~~~D~i~~~~~~~~-~-------------- 188 (377)
T d1o6ca_ 133 EELNRQMTGAIADLHFAPTGQAKDNLLK---ENKKAD------SIFVTGNTAIDALNTTVRDGY-S-------------- 188 (377)
T ss_dssp HHHHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC-C--------------
T ss_pred hhhhccccccceeEEeecchhhhhhhhh---hccccc------eEeeccchhHHHHHHHHHHHH-h--------------
Confidence 13344444 5699999999999999997 777766 66666553 331100000000 0
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEeccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEE
Q 007300 383 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 459 (609)
Q Consensus 383 ~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 459 (609)
...... ...+.++++.+-|-+.. +.....+.++..+.. .++.+++-..........+.+... ...++..
T Consensus 189 ------~~~~~~-~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ni~~ 260 (377)
T d1o6ca_ 189 ------HPVLDQ-VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFG-DSDRVHL 260 (377)
T ss_dssp ------CSTTTT-TTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEE
T ss_pred ------hhhhhh-ccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccc-cccceEe
Confidence 000000 11233556666665532 222333333333322 466666554433333333333222 3346887
Q ss_pred EeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCHH
Q 007300 460 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 460 ~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
...+.......+++.|++++-- .|-.+.||-.+|+|+|.-.. +.-++.+..|.+ ++ ...|.+
T Consensus 261 ~~~l~~~~fl~llk~s~~vIgn-----Sss~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-il-----------v~~~~~ 323 (377)
T d1o6ca_ 261 IEPLEVIDFHNFAAKSHFILTD-----SGGVQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KL-----------AGTDEE 323 (377)
T ss_dssp CCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTTSS-EE-----------ECSCHH
T ss_pred ccccchHHHHHHHhhhheeecc-----cchhHHhhhhhhceEEEeCCCCcCcchhhcCee-EE-----------CCCCHH
Confidence 7778888887899999998833 44558899999999998754 335566655533 43 345889
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++.+++..++.+ ......+.+ ....|.=-..+++..+++.+-.
T Consensus 324 ~I~~~i~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 324 NIYQLAKQLLTD--PDEYKKMSQ--ASNPYGDGEASRRIVEELLFHY 366 (377)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHH--CCCTTCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC--hHHHhhhcc--CCCCCCCChHHHHHHHHHHHhh
Confidence 999999999987 444443322 1233544456677777665433
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.09 E-value=0.00061 Score=68.71 Aligned_cols=279 Identities=16% Similarity=0.077 Sum_probs=158.1
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
+||+|++.-|-...++++..... .++|++ ++|. |....+.. .+.|
T Consensus 86 kPD~v~v~GDr~e~la~a~aa~~-------~~ipi~-Hieg----G~~s~~~~--~~~p--------------------- 130 (376)
T d1f6da_ 86 KPDVVLVHGDTTTTLATSLAAFY-------QRIPVG-HVEA----GLRTGDLY--SPWP--------------------- 130 (376)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHT-------TTCCEE-EESC----CCCCSCTT--SSTT---------------------
T ss_pred cCcceeeeccccchhhHHHHHHh-------hCceEE-EEec----cccccccc--ccCc---------------------
Confidence 59999555566666666555543 588866 4553 21110000 0011
Q ss_pred hHHHHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCc-CCCCccccccccCcchhcccc
Q 007300 305 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEW-NPLTDKYIGVKYDASTVMDAK 381 (609)
Q Consensus 305 ~~~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~-~p~~~~~~~~~~~~~~~~~~~ 381 (609)
-...|..+ ..||..++.++.+++.+.+ .|.++. +|.++-|. +|.-.. .+.. ...+
T Consensus 131 de~~R~~iskls~~hf~~~~~~~~~L~~---~G~~~~------~I~~vG~~~~D~l~~~~~~~-------------~~~~ 188 (376)
T d1f6da_ 131 EEANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSD 188 (376)
T ss_dssp HHHHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCH
T ss_pred hhhhhhhhccceeEEEeccHHHHhHHHh---cCCCcc------ccceecCchHHHHHHHHhhh-------------hccc
Confidence 12334444 5799999999999999997 787766 67766542 321000 0000 0000
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeccc-cccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceE
Q 007300 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 458 (609)
Q Consensus 382 ~~~~~~~~~~~gl~~~~~~~~i~~iGrl~-~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~ 458 (609)
...+..+.....+.. .+..+++..=|.+ ..+..+.++.++..+.. .++.+++--...........+..... .++.
T Consensus 189 ~~~~~~~~~~~~~~~-~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~-~ni~ 266 (376)
T d1f6da_ 189 KLRSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVI 266 (376)
T ss_dssp HHHHHHHTTCTTCCT-TSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEE
T ss_pred hhhhhhhccccccCC-CCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhccc-ccce
Confidence 111111111112221 2234455545544 34556777777776654 46667665544433444444443333 4687
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCH
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 537 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~ 537 (609)
.+..........+++.|++++-- .|-.+.||-.+|+|+|.-.. ...++.+..+ +-++ ...|.
T Consensus 267 ~~~~l~~~~fl~ll~~a~~vign-----Sssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~-----------v~~~~ 329 (376)
T d1f6da_ 267 LIDPQEYLPFVWLMNHAWLILTD-----SGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRL-----------VGTDK 329 (376)
T ss_dssp EECCCCHHHHHHHHHHCSEEEES-----SSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEE-----------CCSSH
T ss_pred eeccccHHHHHHHHhhceEEEec-----CcchHhhHHHhCCCEEEcCCCccCccceecC-eeEE-----------CCCCH
Confidence 77777777777899999999854 45568899999999997633 2344555544 3343 34689
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHH
Q 007300 538 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 538 ~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~ 583 (609)
+++.+++.+++.+ ......+.+ ....|-=-..+++..+++++
T Consensus 330 ~~I~~ai~~~l~~--~~~~~~~~~--~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 330 QRIVEEVTRLLKD--ENEYQAMSR--AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHHHHHHHHC--HHHHHHHHH--SCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--hHhhhhhcc--CCCCCCCChHHHHHHHHHHh
Confidence 9999999999986 333222211 12335444667777777764
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.76 E-value=0.00087 Score=68.36 Aligned_cols=129 Identities=12% Similarity=-0.029 Sum_probs=74.7
Q ss_pred EEEEEeccccc--cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcE
Q 007300 402 VIGFIGRLEEQ--KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADF 477 (609)
Q Consensus 402 ~i~~iGrl~~~--Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv 477 (609)
+.+..|.+... .-...+++++..+ +.++++...+.... ..-.......+.++......+... ++ ..+++
T Consensus 268 v~~s~gs~~~~~~~~~~~~~~~~~~~---~~~vl~~~~~~~~~-~l~~~~~~~~~~nv~~~~~~pq~~---lL~hp~~~~ 340 (450)
T d2c1xa1 268 VYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKARV-HLPEGFLEKTRGYGMVVPWAPQAE---VLAHEAVGA 340 (450)
T ss_dssp EEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGGGG-GSCTTHHHHHTTTEEEESCCCHHH---HHTSTTEEE
T ss_pred eeecccccccCCHHHHHHHHHHHHhc---CCeEEEEECCCccc-cCChhhhhhccccccccccCChHh---hhccCceeE
Confidence 44444544321 1234455555544 55676665433110 111122223344566655555553 45 56676
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccccc-CcceeEecccccccccCCC--CCHHHHHHHHHHHHHh
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALAT 550 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~-~~~G~l~~~~~~~~~~v~~--~d~~~la~~I~~ll~~ 550 (609)
+|. -|=..++.||+.+|+|+|+....+ ...-+.+ .+.|... +. -+.+++.++|+++|++
T Consensus 341 fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~~t~~~l~~ai~~vL~d 406 (450)
T d2c1xa1 341 FVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----------EGGVFTKSGLMSCFDQILSQ 406 (450)
T ss_dssp EEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------GGGSCCHHHHHHHHHHHHHS
T ss_pred EEc----cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEe----------cCCCcCHHHHHHHHHHHhcC
Confidence 663 234458999999999999998654 3334444 4678754 33 3689999999999997
Q ss_pred h
Q 007300 551 Y 551 (609)
Q Consensus 551 ~ 551 (609)
.
T Consensus 407 ~ 407 (450)
T d2c1xa1 407 E 407 (450)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.69 E-value=0.0054 Score=62.06 Aligned_cols=138 Identities=13% Similarity=0.054 Sum_probs=73.3
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHH-HHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQ-LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-~~~~~~-l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
++..+........+.+...+..+...+.++++.-.+. ...... .+..... .++......+.+.. ..+..+|++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~n~~v~~~~pq~~~-l~~p~~~~fIt 354 (461)
T d2acva1 278 FLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELE--GKGMICGWAPQVEV-LAHKAIGGFVS 354 (461)
T ss_dssp EEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHH--CSEEEESSCCHHHH-HHSTTEEEEEE
T ss_pred eeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhccC--CCeEEEecCCHHHH-HhcccCCEEEe
Confidence 3333344344444554444444433356666554332 111111 1222222 23444433344433 25688888883
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-cccCcceeEecccccc-cccCCCCCHHHHHHHHHHHHHh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGSFSVD-CEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-i~~~~~G~l~~~~~~~-~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-+-..++.||+.+|+|+|+....+ ...- ++..+.|+-+. .+ .+....-++++++++|+++|++
T Consensus 355 ----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~---~~~~~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 355 ----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR---VDYRKGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp ----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC---SSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred ----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEee---ccccccCCccCHHHHHHHHHHHhhC
Confidence 344458999999999999987543 3333 35556777540 00 0000014789999999999964
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.60 E-value=0.003 Score=64.20 Aligned_cols=116 Identities=7% Similarity=-0.060 Sum_probs=69.5
Q ss_pred HHHHHHHHhhcccCCeEEEEE-eCCC--hhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCCCCCcH
Q 007300 415 SDILAAAIPHFIKENVQIIVL-GTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRFEPCGL 489 (609)
Q Consensus 415 ~~~ll~a~~~l~~~~~~lviv-G~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~E~~gl 489 (609)
.+.++++++.+ ..+++++ +... ......-.......+.|+......+.+. +| ..+++||. -|=..
T Consensus 306 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~---lL~hp~~~~fIt----HGG~~ 375 (473)
T d2pq6a1 306 LLEFAWGLANC---KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDK---VLNHPSIGGFLT----HCGWN 375 (473)
T ss_dssp HHHHHHHHHHT---TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHH---HHTSTTEEEEEE----CCCHH
T ss_pred HHHHHHHHHhc---CCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHHH---HhcCCcCcEEEe----cCCcc
Confidence 44555566555 4555543 3211 1111111222333455676655555553 56 46666763 23445
Q ss_pred HHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccccccccCCC-CCHHHHHHHHHHHHHh
Q 007300 490 IQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDP-VDVAAVSTTVRRALAT 550 (609)
Q Consensus 490 ~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~~~~~~v~~-~d~~~la~~I~~ll~~ 550 (609)
++.||+.+|+|.|+....+ ...-+ +..+.|... +. -+.++++++|++++++
T Consensus 376 s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~t~~~l~~ai~~vl~d 432 (473)
T d2pq6a1 376 STTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI----------DTNVKREELAKLINEVIAG 432 (473)
T ss_dssp HHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------CSSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee----------CCCcCHHHHHHHHHHHHcC
Confidence 8999999999999997644 33334 443678754 32 3789999999999987
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.77 E-value=0.12 Score=51.55 Aligned_cols=85 Identities=11% Similarity=-0.105 Sum_probs=52.1
Q ss_pred CCceEEEeecChHHHHHHHH--hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccc
Q 007300 454 PEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFS 526 (609)
Q Consensus 454 ~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~ 526 (609)
++++......+... +|+ .++++|. -+=..++.||+.+|+|+|+....+ ....+ +.-+.|....
T Consensus 333 ~~nv~~~~w~Pq~~---lL~hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~--- 402 (471)
T d2vcha1 333 KRGFVIPFWAPQAQ---VLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPR--- 402 (471)
T ss_dssp TTEEEEESCCCHHH---HHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCC---
T ss_pred CCCeeecccCCHHH---HhcCccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEe---
Confidence 34565554445543 674 5666662 234458999999999999987543 33334 3335666320
Q ss_pred cccccCCCCCHHHHHHHHHHHHHh
Q 007300 527 VDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 527 ~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+ -...-+.+++.++|++++++
T Consensus 403 ~~--~~~~~t~~~l~~ai~~vl~~ 424 (471)
T d2vcha1 403 AG--DDGLVRREEVARVVKGLMEG 424 (471)
T ss_dssp CC--TTSCCCHHHHHHHHHHHHTS
T ss_pred cC--CCCcCCHHHHHHHHHHHhCC
Confidence 00 00113779999999999987
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=90.26 E-value=1.8 Score=41.00 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=69.7
Q ss_pred HHHHHHHHhCCCCCCCCcEEE-EEe-ccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhC----CC
Q 007300 384 LKEALQAEVGLPVDRNIPVIG-FIG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PE 455 (609)
Q Consensus 384 ~~~~~~~~~gl~~~~~~~~i~-~iG-rl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~----~~ 455 (609)
.+......+++..+ ++.|+ ..| +..+.|. .+..++.+..+.+.+.+++++|.+.+ .+..+++.... ..
T Consensus 166 ~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~ 241 (348)
T d1pswa_ 166 EKSYTCNQFSLSSE--RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCSS--SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhccccC--CCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccch--HHHHHHHHHhhhccccc
Confidence 35556666776543 35444 443 3344464 56688888888777889999986552 33333332221 11
Q ss_pred ceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 456 KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 456 ~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
.+..+ +..+-.++..+++.||++|-+.. |. +--|.++|+|+|+=-
T Consensus 242 ~~~~l~g~~sl~el~~li~~a~l~I~~Dt----g~-~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 242 WCRNLAGETQLDQAVILIAACKAIVTNDS----GL-MHVAAALNRPLVALY 287 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESS----HH-HHHHHHTTCCEEEEE
T ss_pred ccccccCCccHHHHHHHHhcceeEeecCc----cH-HHHHHHcCCCEEEEE
Confidence 23322 33455667779999999998753 33 344899999999874
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=87.65 E-value=2.6 Score=35.97 Aligned_cols=139 Identities=15% Similarity=0.163 Sum_probs=79.3
Q ss_pred EEEEEeccc--cc-cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec---------------
Q 007300 402 VIGFIGRLE--EQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------------- 463 (609)
Q Consensus 402 ~i~~iGrl~--~~-Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--------------- 463 (609)
+|++.|... +. +-.+...+.-+.|.+.++ .| +|.|...+...+.+-+.+.+..+.+....
T Consensus 6 v~~~~~~~~~~p~~~~~~~a~~lG~~la~~g~-~V-~~GG~~GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~ 83 (170)
T d1rcua_ 6 VVGYSGPVNKSPVSELRDICLELGRTLAKKGY-LV-FNGGRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTG 83 (170)
T ss_dssp EEECCSCTTSTTTGGGHHHHHHHHHHHHHTTC-EE-EECCSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECC
T ss_pred EEEEecCCCCCcchHHHHHHHHHHHHHHHCCC-EE-ECCCccCHHHHHHHHHHhcCCccccccchhhccCcccceeEEec
Confidence 444544433 22 344555566666666776 55 44455567777777677666656554321
Q ss_pred -C-hHHHHHHHHhCcEEEecCCCCCCcHH--HHHHHHcCCceEEcCC-CCcccccccC--cceeEecccccccccCCCCC
Q 007300 464 -N-IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMRYGTVPIVAST-GGLVDTVEEG--FTGFQMGSFSVDCEAVDPVD 536 (609)
Q Consensus 464 -~-~~~~~~~l~~aDv~v~pS~~E~~gl~--~lEAma~G~PvI~s~~-gg~~e~i~~~--~~G~l~~~~~~~~~~v~~~d 536 (609)
+ .+....++..||++|... -++|.. ++|++..++|||.-+. |++.+++.+. ..|++- ....+ ...-.+|
T Consensus 84 ~~~~~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~-~~~~~-~i~~~~~ 159 (170)
T d1rcua_ 84 LDFQMRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLD-NRRIV-EIHQAWT 159 (170)
T ss_dssp CCHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSS-TTCCS-CEEEESS
T ss_pred cchhhhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCC-HHHcC-eEEEeCC
Confidence 1 122334789999988754 356664 8899999999998764 4455555431 233321 00001 1123457
Q ss_pred HHHHHHHHHH
Q 007300 537 VAAVSTTVRR 546 (609)
Q Consensus 537 ~~~la~~I~~ 546 (609)
++++.+.|++
T Consensus 160 ~ee~~~~l~~ 169 (170)
T d1rcua_ 160 VEEAVQIIEQ 169 (170)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888887765
|
| >d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: tRNA 2-thiouridine synthesizing protein D, TusD species: Escherichia coli [TaxId: 562]
Probab=81.94 E-value=0.73 Score=37.69 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=30.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeE-EEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V-~vit~~ 127 (609)
||++++... +|+ .+........+++++.++||+| .|+-..
T Consensus 1 Mk~~i~v~~-~P~--~~~~a~~A~~fA~aal~~Gh~V~~vF~~~ 41 (128)
T d2d1pa1 1 MRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFFYR 41 (128)
T ss_dssp CEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEec-CCC--CcHHHHHHHHHHHHHHhCCCceeEEEEec
Confidence 898888776 675 4455667788999999999999 477644
|
| >d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: Sulfurtransferase DsrE species: Chromatium vinosum [TaxId: 1049]
Probab=81.07 E-value=0.83 Score=37.39 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=30.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeE-EEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V-~vit~~ 127 (609)
||++++... +|+ ..-.......+++++.++||+| .|+--.
T Consensus 1 Mk~~i~v~~-~P~--~~~~a~~al~fA~aal~~gh~V~~vFf~~ 41 (130)
T d2hy5a1 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCeEEEEEEec
Confidence 899888876 675 3445667788999999999999 577533
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=80.51 E-value=0.66 Score=39.19 Aligned_cols=32 Identities=31% Similarity=0.495 Sum_probs=26.0
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+++.. |.+|.. ++..|++.||+|+++...
T Consensus 1 MkI~IiGa--------G~iG~~---~a~~L~~~G~~V~~~~r~ 32 (167)
T d1ks9a2 1 MKITVLGC--------GALGQL---WLTALCKQGHEVQGWLRV 32 (167)
T ss_dssp CEEEEECC--------SHHHHH---HHHHHHHTTCEEEEECSS
T ss_pred CEEEEECc--------CHHHHH---HHHHHHHCCCceEEEEcC
Confidence 89999983 555644 788899999999999865
|