Citrus Sinensis ID: 007370

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600------
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKAC
cccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcEEEccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHccHHHHHHHccccEEEEccccccccccccHHcccccccEEEEEEEcccEEEEEEEEEEEcccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEcccHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHccEEcccccHHHHHHccccccccHHHHHHHcccccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccEEEcccccccccHHHHHHccccccccccccccccccccccccccccccEEEEEccccccccc
cccccccHHcccccccccccccccccEEccEEccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccHHHHcccccccccccccccccccccccEEEEEEEccccccccccHHHHHcccHHHHHHccccEEEEEcccccccccHHHHHHHHccEEEEEEEEccccEEEEEEEEEEcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccHccccccccccccEEEEccHHHHHHHHHHHHHHcccccHHccEEEEEEEHHHHcccccHHHHHHccccHHHHHHcccccccccccccccccccHHHHHHHHHHccEEEEEcccHHHHHccccccccHHHHHHHccccEEEEEEccccccccccccccccEccccccHcHHHHHHHHHHHHHcccccccccEEEEEEcccHcccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHEEcccccccccHHHHHHHHcccccEEEccccccccEEEccccccccccccccccccccccc
MESLQVTRLLSWKSFLNTAAKAGTTRfrattqlgfpplskkatknGFLMIRRSftnastgsgsssggtdavsgnisshdsssppvedekdenkpgyllgqekdgsglvigfhfippsgdhevidsskdidgygvkkiedvegedkaqtrVSYNIVFVTaeaapysktgglgdvcgSLPVALAARghrvmvvspryfngtaadenFTLAKDLGCCMKICCFGGEQEIAFFHEyregvdwvfvdhpsyhrpgnpygdingafgdnqFRYTLLCYAAceaplvlplggftygekcIFLVNDWHAGLVPVLLaskyrphgvykdaRSILVIHNlshqgvepaatyknlglpsewygalewvfptwarthaldtgeAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITngiditewnpssdehiashysiddlsgkVQCKIALQKelglpirpdcpligfigrldyqKGIDLIRLAapeiladdiqfvmlgsgdpqfeswmrdteatykdkyrgwvgfnvpishritagcdillmpsrfepcglnqlyamrygtipvvhatgglrwktSIHLLEKAVVKvqggpfchyqkkac
MESLQVTRLLSWKSFLNTAAKagttrfrattqlgfpplskkatknGFLMIRRSFTnastgsgsssggTDAVSGNisshdsssppvedekDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIedvegedkaqtrvSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVqggpfchyqkkac
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNAstgsgsssggtDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKAC
*****VTRLLSWKSFLNTAAKAGTTRFRATTQLGFPP*******NGFLMI*****************************************************GSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY*****
*********************************************************************************************************************************************************IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQK***
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTN***********************************NKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKAC
*****VTR*LSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKAT*****M***********************************************************************************************KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKAC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKAC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query606 2.2.26 [Sep-21-2011]
Q9FNF2652 Starch synthase 1, chloro yes no 0.900 0.837 0.653 0.0
P93568641 Soluble starch synthase 1 N/A no 0.914 0.864 0.660 0.0
Q0DEC8641 Soluble starch synthase 1 yes no 0.731 0.691 0.752 0.0
A2Y9M4641 Soluble starch synthase 1 N/A no 0.731 0.691 0.75 0.0
Q43654647 Starch synthase 1, chloro N/A no 0.726 0.680 0.746 0.0
Q9MAC8792 Starch synthase 2, chloro no no 0.673 0.515 0.524 1e-124
Q43847767 Granule-bound starch synt N/A no 0.673 0.531 0.512 1e-117
Q6Z2T8694 Soluble starch synthase 2 no no 0.673 0.587 0.498 1e-116
Q7XE48749 Soluble starch synthase 2 no no 0.673 0.544 0.501 1e-115
Q43093752 Granule-bound starch synt N/A no 0.673 0.542 0.487 1e-115
>sp|Q9FNF2|SSY1_ARATH Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/600 (65%), Positives = 460/600 (76%), Gaps = 54/600 (9%)

Query: 1   MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTG 60
           M SLQ++  + ++ F+          FR    LGFP              RR F   S G
Sbjct: 1   MASLQISGSVKFEPFVGFNR---IRHFRPIASLGFP------------RFRRRF---SIG 42

Query: 61  SGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDH 120
                  + + SG             D ++ ++  ++   E+DGSG V+GF   PP GD 
Sbjct: 43  RSLLLRRSSSFSG-------------DSRESDEERFITDAERDGSGSVLGFQLTPP-GDQ 88

Query: 121 EVIDSS-----------KDID-----GYGVKKIEDVE------GEDKAQTRVSYNIVFVT 158
           + + +S           + ID      +GV     VE      G    +  V  N+VFVT
Sbjct: 89  QTVSTSTGEITHHEEKKEAIDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVT 148

Query: 159 AEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKIC 218
           +EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAAD+N+  AKDLG  + + 
Sbjct: 149 SEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVN 208

Query: 219 CFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAP 278
           CFGG QE++F+HEYR+GVDWVFVDH SYHRPGNPYGD  GAFGDNQFR+TLLC+AACEAP
Sbjct: 209 CFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAP 268

Query: 279 LVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA 338
           LVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPA
Sbjct: 269 LVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPA 328

Query: 339 ATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEIT 398
           ATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEIT
Sbjct: 329 ATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEIT 388

Query: 399 TVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458
           TVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI  HYS DD+S K++CK+ALQK
Sbjct: 389 TVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQK 448

Query: 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE 518
           ELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR  E
Sbjct: 449 ELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSME 508

Query: 519 ATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 578
            TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH TGGLR
Sbjct: 509 ETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLR 568

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1
>sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1 Back     alignment and function description
>sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1 Back     alignment and function description
>sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2 Back     alignment and function description
>sp|Q9MAC8|SSY2_ARATH Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS2 PE=2 SV=1 Back     alignment and function description
>sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3 Back     alignment and function description
>sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2 Back     alignment and function description
>sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2 Back     alignment and function description
>sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query606
224135151649 predicted protein [Populus trichocarpa] 0.887 0.828 0.755 0.0
157169067633 starch synthase isoform I [Manihot escul 0.902 0.864 0.694 0.0
356509243651 PREDICTED: soluble starch synthase, chlo 0.882 0.821 0.698 0.0
297808439655 hypothetical protein ARALYDRAFT_489289 [ 0.867 0.803 0.681 0.0
225455364633 PREDICTED: soluble starch synthase, chlo 0.795 0.761 0.766 0.0
15237934652 soluble starch synthase [Arabidopsis tha 0.900 0.837 0.653 0.0
302143910568 unnamed protein product [Vitis vinifera] 0.795 0.848 0.766 0.0
357463955655 Soluble starch synthase [Medicago trunca 0.917 0.848 0.675 0.0
356518639647 PREDICTED: soluble starch synthase, chlo 0.889 0.833 0.694 0.0
47077341645 starch synthase I precursor [Phaseolus v 0.907 0.852 0.669 0.0
>gi|224135151|ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/560 (75%), Positives = 476/560 (85%), Gaps = 22/560 (3%)

Query: 24  TTR--FRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSS 81
           TTR  FR   QLGF    ++  K G L+I RS        G S  G ++  GN +     
Sbjct: 23  TTRVGFRPRAQLGFGCFVRERYKYGNLVIARS--------GRSEVG-NSKDGNFA----- 68

Query: 82  SPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSG---DHEVIDSSKDIDGYGVKKIE 138
              VE+EK E + G +LG E+D SG +IGF+ IPPSG      V++S +D    G ++ E
Sbjct: 69  ---VENEKKEKRGGLILGPERDSSGSIIGFNLIPPSGMDISFTVLESHEDATTGGTEEAE 125

Query: 139 DVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNG 198
           D+EG +K QTRV+YNIVFVT+EAAPYSKTGGLGDVCGSLP+ LAARGHRVMVVSPRY +G
Sbjct: 126 DIEGVEKVQTRVTYNIVFVTSEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHG 185

Query: 199 TAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDING 258
           + AD+NF  A +L C +K+ CFGGEQE+AFFHEYREGVDWVFVDHPSYHRPGNPYGD  G
Sbjct: 186 SPADKNFAGASELDCHIKVYCFGGEQEVAFFHEYREGVDWVFVDHPSYHRPGNPYGDSRG 245

Query: 259 AFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVY 318
           AFGDNQFR+ LLC+AACEAPLVLPLGG+TYGEKC+FLVNDWHAGLVPVLLASKYRP+GVY
Sbjct: 246 AFGDNQFRFALLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLASKYRPYGVY 305

Query: 319 KDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKG 378
           KDAR+ILVIHNL+HQGVEPAATY NLGLPSEWYGAL WVFPTWARTHALDTGEAVN+LKG
Sbjct: 306 KDARTILVIHNLAHQGVEPAATYTNLGLPSEWYGALGWVFPTWARTHALDTGEAVNLLKG 365

Query: 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIA 438
           AIVT DR+LTVSKGY+WEITTVEGGYGLHE+LSSR+SVLNGITNGIDI EWNPSSD+HIA
Sbjct: 366 AIVTVDRILTVSKGYAWEITTVEGGYGLHELLSSRRSVLNGITNGIDIYEWNPSSDKHIA 425

Query: 439 SHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDI 498
           S+YS+DDLSGKVQCKIALQKELGLPI+PDCPLIGFIGRLDYQKGIDLIR A PE+L DD+
Sbjct: 426 SNYSVDDLSGKVQCKIALQKELGLPIKPDCPLIGFIGRLDYQKGIDLIRWATPELLEDDV 485

Query: 499 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLN 558
           QFVMLGSGDP +E WMR TE+TYKDK+RGWVGFN+PISH+ITAG DILLMPSRFEPCGLN
Sbjct: 486 QFVMLGSGDPLYEDWMRATESTYKDKFRGWVGFNIPISHKITAGADILLMPSRFEPCGLN 545

Query: 559 QLYAMRYGTIPVVHATGGLR 578
           QLYAMRYGT+PVVH TGGLR
Sbjct: 546 QLYAMRYGTVPVVHGTGGLR 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|157169067|gb|ABV25893.1| starch synthase isoform I [Manihot esculenta] Back     alignment and taxonomy information
>gi|356509243|ref|XP_003523360.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297808439|ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225455364|ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|15237934|ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] gi|334187896|ref|NP_001190378.1| soluble starch synthase [Arabidopsis thaliana] gi|29337131|sp|Q9FNF2.1|SSY1_ARATH RecName: Full=Starch synthase 1, chloroplastic/amyloplastic; Short=AtSS1; Short=SSS; AltName: Full=Soluble starch synthase I; Flags: Precursor gi|10177090|dbj|BAB10396.1| soluble starch synthase [Arabidopsis thaliana] gi|22135791|gb|AAM91082.1| AT5g24300/MOP9_12 [Arabidopsis thaliana] gi|110742056|dbj|BAE98960.1| soluble starch synthase [Arabidopsis thaliana] gi|332005899|gb|AED93282.1| soluble starch synthase [Arabidopsis thaliana] gi|332005900|gb|AED93283.1| soluble starch synthase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|302143910|emb|CBI23015.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357463955|ref|XP_003602259.1| Soluble starch synthase [Medicago truncatula] gi|355491307|gb|AES72510.1| Soluble starch synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356518639|ref|XP_003527986.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|47077341|dbj|BAD18845.1| starch synthase I precursor [Phaseolus vulgaris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query606
TAIR|locus:2169749652 SS1 "starch synthase 1" [Arabi 0.925 0.860 0.658 1.9e-209
TAIR|locus:2102102792 SS2 "starch synthase 2" [Arabi 0.673 0.515 0.526 1.6e-115
TAIR|locus:2037950610 GBSS1 "granule bound starch sy 0.724 0.719 0.416 1.6e-86
UNIPROTKB|Q42968609 WAXY "Granule-bound starch syn 0.696 0.692 0.423 2.4e-85
TIGR_CMR|GSU_1023501 GSU_1023 "glycogen synthase" [ 0.452 0.546 0.445 2.8e-82
TIGR_CMR|GSU_3257484 GSU_3257 "glycogen synthase" [ 0.447 0.559 0.425 2.6e-54
TIGR_CMR|BA_5120476 BA_5120 "glycogen synthase" [B 0.447 0.569 0.395 8.3e-51
UNIPROTKB|Q9KRB6484 glgA "Glycogen synthase" [Vibr 0.536 0.671 0.354 6.7e-49
TIGR_CMR|VC_1726484 VC_1726 "glycogen synthase" [V 0.536 0.671 0.354 6.7e-49
UNIPROTKB|P0A6U8477 glgA [Escherichia coli K-12 (t 0.466 0.593 0.370 6.9e-47
TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2025 (717.9 bits), Expect = 1.9e-209, P = 1.9e-209
 Identities = 385/585 (65%), Positives = 459/585 (78%)

Query:     1 MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRS--FTNAX 58
             M SLQ++  + ++ F+          FR    LGFP   ++ +    L++RRS  F+   
Sbjct:     1 MASLQISGSVKFEPFVGFNR---IRHFRPIASLGFPRFRRRFSIGRSLLLRRSSSFSGDS 57

Query:    59 XXXXXXXXXXDAV---SGNISSHDSSSPPVEDEKDENKPGYLLGQE--KDGSGLVIGFHF 113
                       DA    SG++     + PP + +      G +   E  K+    ++   F
Sbjct:    58 RESDEERFITDAERDGSGSVLGFQLT-PPGDQQTVSTSTGEITHHEEKKEAIDQIVMADF 116

Query:   114 IPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDV 173
               P G+  V + + ++   G+          KA+  V  N+VFVT+EAAPYSKTGGLGDV
Sbjct:   117 GVP-GNRAVEEGAAEV---GIPS-------GKAE--VVNNLVFVTSEAAPYSKTGGLGDV 163

Query:   174 CGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233
             CGSLP+ALA RGHRVMV+SPRY NGTAAD+N+  AKDLG  + + CFGG QE++F+HEYR
Sbjct:   164 CGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYHEYR 223

Query:   234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCI 293
             +GVDWVFVDH SYHRPGNPYGD  GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEK +
Sbjct:   224 DGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSL 283

Query:   294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGA 353
             FLVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPAATY NLGLPSEWYGA
Sbjct:   284 FLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGA 343

Query:   354 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR 413
             + WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEITTVEGGYGL ++LSSR
Sbjct:   344 VGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSR 403

Query:   414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 473
             KSV+NGITNGI++ EWNPS+DEHI  HYS DD+S K++CK+ALQKELGLPIRP+CP+IGF
Sbjct:   404 KSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGF 463

Query:   474 IGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533
             IGRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR  E TY+DK+RGWVGFNV
Sbjct:   464 IGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNV 523

Query:   534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 578
             PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH TGGLR
Sbjct:   524 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLR 568
GO:0005739 "mitochondrion" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0009250 "glucan biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0009011 "starch synthase activity" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0010021 "amylopectin biosynthetic process" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0001666 "response to hypoxia" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FNF2SSY1_ARATH2, ., 4, ., 1, ., 2, 10.65330.90090.8374yesno
Q0DEC8SSY1_ORYSJ2, ., 4, ., 1, ., 2, 10.75220.73100.6911yesno
P93568SSY1_SOLTU2, ., 4, ., 1, ., 2, 10.66090.91410.8642N/Ano
Q43654SSY1_WHEAT2, ., 4, ., 1, ., 2, 10.74600.72600.6800N/Ano
A2Y9M4SSY1_ORYSI2, ., 4, ., 1, ., 2, 10.750.73100.6911N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.210.946
4th Layer2.4.1.246LOW CONFIDENCE prediction!
3rd Layer2.4.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
cd03791476 cd03791, GT1_Glycogen_synthase_DULL1_like, This fa 0.0
TIGR02095473 TIGR02095, glgA, glycogen/starch synthase, ADP-glu 1e-164
PRK00654466 PRK00654, glgA, glycogen synthase; Provisional 1e-149
COG0297487 COG0297, GlgA, Glycogen synthase [Carbohydrate tra 1e-123
PRK14099485 PRK14099, PRK14099, glycogen synthase; Provisional 5e-90
pfam08323234 pfam08323, Glyco_transf_5, Starch synthase catalyt 1e-74
PRK14098489 PRK14098, PRK14098, glycogen synthase; Provisional 1e-71
PLN02939977 PLN02939, PLN02939, transferase, transferring glyc 4e-59
PLN023161036 PLN02316, PLN02316, synthase/transferase 2e-51
cd03801374 cd03801, GT1_YqgM_like, This family is most closel 2e-15
pfam00534158 pfam00534, Glycos_transf_1, Glycosyl transferases 7e-13
cd01635229 cd01635, Glycosyltransferase_GTB_type, Glycosyltra 2e-11
COG0438381 COG0438, RfaG, Glycosyltransferase [Cell envelope 3e-10
cd03798377 cd03798, GT1_wlbH_like, This family is most closel 4e-10
TIGR02149388 TIGR02149, glgA_Coryne, glycogen synthase, Coryneb 1e-09
cd03808359 cd03808, GT1_cap1E_like, This family is most close 1e-08
cd03795357 cd03795, GT1_like_4, This family is most closely r 4e-07
cd03821375 cd03821, GT1_Bme6_like, This family is most closel 4e-07
cd03807365 cd03807, GT1_WbnK_like, This family is most closel 3e-06
cd03814364 cd03814, GT1_like_2, This family is most closely r 6e-06
pfam13692134 pfam13692, Glyco_trans_1_4, Glycosyl transferases 8e-06
cd03800398 cd03800, GT1_Sucrose_synthase, This family is most 1e-05
cd03811353 cd03811, GT1_WabH_like, This family is most closel 3e-05
cd03817374 cd03817, GT1_UGDG_like, This family is most closel 8e-05
cd03823359 cd03823, GT1_ExpE7_like, This family is most close 2e-04
cd03820348 cd03820, GT1_amsD_like, This family is most closel 0.001
TIGR04157406 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG 0.001
cd03794394 cd03794, GT1_wbuB_like, This family is most closel 0.002
>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information 
 Score =  525 bits (1355), Expect = 0.0
 Identities = 186/426 (43%), Positives = 244/426 (57%), Gaps = 20/426 (4%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
            ++FV +E AP++KTGGLGDV G+LP ALA  GH V V+ P+Y  G   DE       L 
Sbjct: 1   KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKY--GRILDELRGQLLVLR 58

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 272
               +   G  + +  F    +GV   F+D+P Y      Y D    + DN  R+ L   
Sbjct: 59  LFG-VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSR 117

Query: 273 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 332
           AA E    L        +  I   +DWH GLVP LL  KY     +K+ +++  IHNL++
Sbjct: 118 AALELLRRL------GWKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIKTVFTIHNLAY 170

Query: 333 QGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392
           QGV P    ++LGLP E                 L+    VN LK  IV AD + TVS  
Sbjct: 171 QGVFPLEALEDLGLPWEEL----------FHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220

Query: 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452
           Y+ EI T E G GL  +L +R   L+GI NGID   WNP++D H+ ++YS DDL GK + 
Sbjct: 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAEN 280

Query: 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFES 512
           K ALQ+ELGLP+ PD PL GF+GRL  QKGIDL+  A PE+L    Q V+LGSGDP++E 
Sbjct: 281 KAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEE 340

Query: 513 WMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572
            +R+  A Y  +    +G++  ++H I AG D  LMPSRFEPCGL Q+YAMRYGT+P+V 
Sbjct: 341 ALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR 400

Query: 573 ATGGLR 578
           ATGGL 
Sbjct: 401 ATGGLA 406

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476
>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type Back     alignment and domain information
>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain Back     alignment and domain information
>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups Back     alignment and domain information
>gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase Back     alignment and domain information
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family Back     alignment and domain information
>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system Back     alignment and domain information
>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 606
PLN02939977 transferase, transferring glycosyl groups 100.0
PRK14098489 glycogen synthase; Provisional 100.0
PRK14099485 glycogen synthase; Provisional 100.0
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 100.0
PRK00654466 glgA glycogen synthase; Provisional 100.0
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 100.0
PLN023161036 synthase/transferase 100.0
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 100.0
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 100.0
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 100.0
TIGR02470784 sucr_synth sucrose synthase. This model represents 100.0
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 100.0
cd03796398 GT1_PIG-A_like This family is most closely related 100.0
PRK10307412 putative glycosyl transferase; Provisional 100.0
cd04962371 GT1_like_5 This family is most closely related to 100.0
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 100.0
PLN00142815 sucrose synthase 99.98
cd03818396 GT1_ExpC_like This family is most closely related 99.98
PRK10125405 putative glycosyl transferase; Provisional 99.98
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 99.97
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 99.97
cd03812358 GT1_CapH_like This family is most closely related 99.97
PLN02846 462 digalactosyldiacylglycerol synthase 99.97
cd03819355 GT1_WavL_like This family is most closely related 99.97
cd03805392 GT1_ALG2_like This family is most closely related 99.97
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 99.97
cd03802335 GT1_AviGT4_like This family is most closely relate 99.97
cd03800398 GT1_Sucrose_synthase This family is most closely r 99.97
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 99.97
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 99.96
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 99.96
cd04955363 GT1_like_6 This family is most closely related to 99.96
cd04951360 GT1_WbdM_like This family is most closely related 99.96
cd04299 778 GT1_Glycogen_Phosphorylase_like This family is mos 99.96
cd03823359 GT1_ExpE7_like This family is most closely related 99.96
cd03817374 GT1_UGDG_like This family is most closely related 99.96
cd03795357 GT1_like_4 This family is most closely related to 99.96
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 99.96
cd03807365 GT1_WbnK_like This family is most closely related 99.96
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 99.96
cd03821375 GT1_Bme6_like This family is most closely related 99.96
cd03806419 GT1_ALG11_like This family is most closely related 99.96
cd03794394 GT1_wbuB_like This family is most closely related 99.96
cd03816415 GT1_ALG1_like This family is most closely related 99.96
cd03814364 GT1_like_2 This family is most closely related to 99.96
cd03825365 GT1_wcfI_like This family is most closely related 99.95
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 99.95
cd03808359 GT1_cap1E_like This family is most closely related 99.95
cd03809365 GT1_mtfB_like This family is most closely related 99.95
KOG1111426 consensus N-acetylglucosaminyltransferase complex, 99.95
cd03811353 GT1_WabH_like This family is most closely related 99.95
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 99.95
cd03822366 GT1_ecORF704_like This family is most closely rela 99.95
cd03801374 GT1_YqgM_like This family is most closely related 99.94
cd03820348 GT1_amsD_like This family is most closely related 99.94
cd03798377 GT1_wlbH_like This family is most closely related 99.94
PLN02949463 transferase, transferring glycosyl groups 99.94
PLN02501 794 digalactosyldiacylglycerol synthase 99.93
PLN02275371 transferase, transferring glycosyl groups 99.93
cd03813475 GT1_like_3 This family is most closely related to 99.93
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 99.93
cd03804351 GT1_wbaZ_like This family is most closely related 99.92
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 99.92
PHA01633335 putative glycosyl transferase group 1 99.91
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 99.9
PHA01630331 putative group 1 glycosyl transferase 99.89
cd04946407 GT1_AmsK_like This family is most closely related 99.89
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 99.88
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 99.87
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 99.86
cd04949372 GT1_gtfA_like This family is most closely related 99.86
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 99.85
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 99.84
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 99.83
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.81
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 99.77
PRK13609380 diacylglycerol glucosyltransferase; Provisional 99.77
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 99.75
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 99.75
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 99.74
PLN02605382 monogalactosyldiacylglycerol synthase 99.72
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 99.7
KOG0853495 consensus Glycosyltransferase [Cell wall/membrane/ 99.66
PRK13608391 diacylglycerol glucosyltransferase; Provisional 99.63
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 99.61
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 99.6
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 99.6
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.6
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 99.59
PF05693633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 99.55
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 99.49
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 99.44
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 99.39
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.38
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 99.38
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 99.26
PRK10117474 trehalose-6-phosphate synthase; Provisional 99.19
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 99.19
COG0058 750 GlgP Glucan phosphorylase [Carbohydrate transport 99.14
KOG2941444 consensus Beta-1,4-mannosyltransferase [Posttransl 99.07
PRK14986 815 glycogen phosphorylase; Provisional 99.07
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 99.06
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 99.02
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 98.99
TIGR02093 794 P_ylase glycogen/starch/alpha-glucan phosphorylase 98.98
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 98.89
cd04300 797 GT1_Glycogen_Phosphorylase This is a family of oli 98.84
PRK14985 798 maltodextrin phosphorylase; Provisional 98.83
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 98.81
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 98.63
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 98.51
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 98.51
TIGR02919438 accessory Sec system glycosyltransferase GtfB. Mem 98.49
KOG3742 692 consensus Glycogen synthase [Carbohydrate transpor 98.42
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 98.38
PF00343 713 Phosphorylase: Carbohydrate phosphorylase; InterPr 98.38
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 98.18
COG0763381 LpxB Lipid A disaccharide synthetase [Cell envelop 98.12
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 98.04
PRK01021608 lpxB lipid-A-disaccharide synthase; Reviewed 97.87
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 97.77
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 97.75
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 97.74
PF00862550 Sucrose_synth: Sucrose synthase; InterPro: IPR0003 97.45
TIGR03492396 conserved hypothetical protein. This protein famil 97.4
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 97.3
TIGR00661321 MJ1255 conserved hypothetical protein. This model 97.26
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 97.24
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 97.15
COG1817346 Uncharacterized protein conserved in archaea [Func 96.8
PRK14089347 ipid-A-disaccharide synthase; Provisional 96.65
PHA03392507 egt ecdysteroid UDP-glucosyltransferase; Provision 96.41
COG3660329 Predicted nucleoside-diphosphate-sugar epimerase [ 96.39
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 96.36
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 96.34
COG4671400 Predicted glycosyl transferase [General function p 95.48
KOG1050 732 consensus Trehalose-6-phosphate synthase component 95.38
PF06258311 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP 95.34
PF11997268 DUF3492: Domain of unknown function (DUF3492); Int 95.3
COG1819406 Glycosyl transferases, related to UDP-glucuronosyl 95.22
COG0381383 WecB UDP-N-acetylglucosamine 2-epimerase [Cell env 94.68
PRK02797322 4-alpha-L-fucosyltransferase; Provisional 94.06
PF07429360 Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc 92.5
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 92.42
TIGR02195334 heptsyl_trn_II lipopolysaccharide heptosyltransfer 92.35
PF01075247 Glyco_transf_9: Glycosyltransferase family 9 (hept 89.93
PRK10017426 colanic acid biosynthesis protein; Provisional 89.91
PF04464369 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate 89.09
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 88.64
PF1008797 DUF2325: Uncharacterized protein conserved in bact 87.76
PRK10422352 lipopolysaccharide core biosynthesis protein; Prov 86.66
cd03789279 GT1_LPS_heptosyltransferase Lipopolysaccharide hep 86.52
COG3980318 spsG Spore coat polysaccharide biosynthesis protei 86.44
COG4641373 Uncharacterized protein conserved in bacteria [Fun 85.66
PF05159269 Capsule_synth: Capsule polysaccharide biosynthesis 85.05
PF01975196 SurE: Survival protein SurE; InterPro: IPR002828 T 82.54
TIGR02201344 heptsyl_trn_III lipopolysaccharide heptosyltransfe 81.95
PRK10916348 ADP-heptose:LPS heptosyltransferase II; Provisiona 80.24
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information 
Probab=100.00  E-value=2.1e-59  Score=529.34  Aligned_cols=435  Identities=33%  Similarity=0.500  Sum_probs=351.7

Q ss_pred             cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEE
Q 007370          147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI  226 (606)
Q Consensus       147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (606)
                      .++++|||+||+++..|+.++||++.++..|+++|++.||+|.||+|.|......  ...............+.+....+
T Consensus       477 ~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~  554 (977)
T PLN02939        477 GTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLFKN  554 (977)
T ss_pred             CCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCceeEE
Confidence            4678999999999999999999999999999999999999999999999754210  00000001111221222223357


Q ss_pred             EEEEeeeCCceEEEeeCC---CCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchh
Q 007370          227 AFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL  303 (606)
Q Consensus       227 ~~~~~~~~gv~v~~l~~~---~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l  303 (606)
                      +++....+||++|+++.+   .|+.++.+|++     .|+..||.+|++++++.+...   +|   +|||||||||++++
T Consensus       555 ~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~-----~Dn~~RF~~FsrAaLe~~~~~---~~---~PDIIH~HDW~TaL  623 (977)
T PLN02939        555 KIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE-----HDDFKRFSYFSRAALELLYQS---GK---KPDIIHCHDWQTAF  623 (977)
T ss_pred             EEEEEEECCeeEEEEecCCchhccCCCCCCCC-----ccHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCccHHH
Confidence            888889999999999853   27777788863     599999999999999987654   34   89999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccc-ccccccccccccccchhHHHHHHHHHHh
Q 007370          304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGAL-EWVFPTWARTHALDTGEAVNVLKGAIVT  382 (606)
Q Consensus       304 ~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~  382 (606)
                      ++.++...+...+ +.++|+|+|+||+.|||.++...+..+|++...+... .+..         .++..+|+++.++..
T Consensus       624 V~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~---------~~~~~iN~LK~GIv~  693 (977)
T PLN02939        624 VAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQD---------NAHGRINVVKGAIVY  693 (977)
T ss_pred             HHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhh---------ccCCchHHHHHHHHh
Confidence            8665554443322 3678999999999999999887777788887665321 1110         024568999999999


Q ss_pred             ccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCC
Q 007370          383 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL  462 (606)
Q Consensus       383 ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl  462 (606)
                      ||.|+|||+.+++++.+ ..++||...+.....++.+|+||||++.|.|..+..++.+|+.+++++|..++.++++++|+
T Consensus       694 AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL  772 (977)
T PLN02939        694 SNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGL  772 (977)
T ss_pred             CCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCC
Confidence            99999999999999988 78899999999889999999999999999999888888999999999999999999999999


Q ss_pred             CCC-CCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCC-hhhHHHHHHHHhhcC--CcEEEEccCChhHHHH
Q 007370          463 PIR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFNVPISHR  538 (606)
Q Consensus       463 ~~~-~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~-~~~~~~~~~l~~~~~--~~~~~~~g~~~~~l~~  538 (606)
                      +.. ++.++|+||||+.++||++.+++|+.++.+.+++|+|+|+|+ +.++..++.+...+.  .++.+..++++...+.
T Consensus       773 ~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~  852 (977)
T PLN02939        773 SSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHS  852 (977)
T ss_pred             CcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHH
Confidence            842 467999999999999999999999999877789999999995 344566666666653  3566555567666679


Q ss_pred             HHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccccc-ccccceeeeecCCccC
Q 007370          539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKA-VVKVQGGPFCHYQKKA  605 (606)
Q Consensus       539 ~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~-~~~~nG~~f~~~~~~~  605 (606)
                      +|++||+||+||.+|+||++++|||+||+|||++++||+.|+|.+.+.+.. ...+|||+|..+|+++
T Consensus       853 IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~ea  920 (977)
T PLN02939        853 IYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQG  920 (977)
T ss_pred             HHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHH
Confidence            999999999999999999999999999999999999999999988543221 1136999999988753

>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>TIGR02919 accessory Sec system glycosyltransferase GtfB Back     alignment and domain information
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>COG1817 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PRK14089 ipid-A-disaccharide synthase; Provisional Back     alignment and domain information
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional Back     alignment and domain information
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins Back     alignment and domain information
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes Back     alignment and domain information
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Back     alignment and domain information
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK02797 4-alpha-L-fucosyltransferase; Provisional Back     alignment and domain information
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II Back     alignment and domain information
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional Back     alignment and domain information
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) Back     alignment and domain information
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT Back     alignment and domain information
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family Back     alignment and domain information
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative Back     alignment and domain information
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
3vue_A536 Crystal Structure Of Rice Granule Bound Starch Synt 3e-87
3d1j_A477 Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 2e-63
2qzs_A485 Crystal Structure Of Wild-Type E.Coli Gs In Complex 7e-63
3cop_A485 Crystal Structure Of E.Coli Gs Mutant E377a In Comp 3e-62
1rzu_A485 Crystal Structure Of The Glycogen Synthase From A. 2e-59
1rzv_A485 Crystal Structure Of The Glycogen Synthase From Agr 9e-58
3fro_A439 Crystal Structure Of Pyrococcus Abyssi Glycogen Syn 3e-17
3l01_A428 Crystal Structure Of Monomeric Glycogen Synthase Fr 3e-17
2bis_A440 Structure Of Glycogen Synthase From Pyrococcus Abys 3e-17
2bfw_A200 Structure Of The C Domain Of Glycogen Synthase From 9e-14
3okc_A394 Crystal Structure Of Corynebacterium Glutamicum Pim 3e-04
3oka_A381 Crystal Structure Of Corynebacterium Glutamicum Pim 4e-04
>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  319 bits (818), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/455 (42%), Positives = 265/455 (58%), Gaps = 38/455 (8%)
Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
           N+VFV AE AP+SKTGGLGDV G LP A+AA GHRVMV+SPRY       + +  A D  
Sbjct: 11  NVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY-------DQYKDAWDTS 63
Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-----HRPGNP-YGDINGA-FGDNQF 265
              +I      + + FFH Y+ GVD VF+DHPS+      + G   YG   G  + DNQ 
Sbjct: 64  VVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQM 123
Query: 266 RYTLLCYAACEAPLVLPLGGF-----TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKD 320
           R++LLC AA EAP +L L        TYGE  +F+ NDWH G +   L + Y+P+G+Y++
Sbjct: 124 RFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRN 183
Query: 321 ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT---GEAVNVLK 377
           A+    IHN+S+QG      Y  L L   +  + +++          DT   G  +N +K
Sbjct: 184 AKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI-------DGYDTPVEGRKINWMK 236
Query: 378 GAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEH 436
             I+ ADR+LTVS  Y+ E I+ +  G  L  I+  R + + GI NG+D++EW+PS D++
Sbjct: 237 AGILEADRVLTVSPYYAEELISGIARGCELDNIM--RLTGITGIVNGMDVSEWDPSKDKY 294
Query: 437 IASHY-SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA 495
           I + Y +   +  K   K ALQ E GLP+    PLI FIGRL+ QKG D++  A PE++ 
Sbjct: 295 ITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ 354
Query: 496 DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPC 555
           +D+Q V+LG+G  +FE  ++  E  Y  K R  V FN P++H I AG D+L +PSRFEPC
Sbjct: 355 EDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPC 414
Query: 556 GLNQLYAMRYGTIPVVHATGGL-----RWKTSIHL 585
           GL QL  MRYGT     +TGGL       KT  H+
Sbjct: 415 GLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 449
>pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 Back     alignment and structure
>pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 Back     alignment and structure
>pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 Back     alignment and structure
>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 Back     alignment and structure
>pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 Back     alignment and structure
>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 Back     alignment and structure
>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 Back     alignment and structure
>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 Back     alignment and structure
>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 Back     alignment and structure
>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 Back     alignment and structure
>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 0.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 0.0
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 1e-161
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 7e-81
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 3e-19
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 2e-15
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 2e-15
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 5e-15
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 2e-14
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 1e-13
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 3e-13
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 3e-11
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 1e-04
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 1e-10
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 4e-09
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 3e-08
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 1e-06
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 2e-06
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 2e-04
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 Back     alignment and structure
 Score =  576 bits (1486), Expect = 0.0
 Identities = 145/430 (33%), Positives = 212/430 (49%), Gaps = 33/430 (7%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
            ++ V +E  P  KTGGL DV G+LP A  A G    V+ P +       +      D  
Sbjct: 2   QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF------PDIRRGVTDAQ 55

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 270
              +   F G   +     +  GV    +D P    RPG+PY D N  A+ DN  R+ LL
Sbjct: 56  VVSRRDTFAGHITL--LFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALL 113

Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
            +   E    L           +   +DWHAGL P  LA++ RP      A+S+  +HNL
Sbjct: 114 GWVGAEMASGLDPFW----RPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNL 163

Query: 331 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390
           ++QG+  A    ++ LP  ++             H L+    ++ LK  +  AD +  VS
Sbjct: 164 AYQGMFYAHHMNDIQLPWSFF-----------NIHGLEFNGQISFLKAGLYYADHITAVS 212

Query: 391 KGYSWEITTVEGGYGLHEILSSR--KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 448
             Y+ EIT  +  YG+  +L  R  +  L+G+ NG+D   W+P +D  +AS Y+ D L  
Sbjct: 213 PTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED 272

Query: 449 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 508
           K + K  LQ  +GL +    PL   + RL  QKG+DL+  A P +L    Q  +LG+GDP
Sbjct: 273 KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP 332

Query: 509 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI 568
             +       A Y  +    +G++   SHRI  G D++L+PSRFEPCGL QLY ++YGT+
Sbjct: 333 VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL 392

Query: 569 PVVHATGGLR 578
           P+V  TGGL 
Sbjct: 393 PLVRRTGGLA 402
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query606
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 100.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 100.0
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 100.0
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 100.0
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 100.0
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 100.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 100.0
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 100.0
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 100.0
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 100.0
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 99.97
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 99.97
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 99.97
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 99.97
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 99.97
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.94
2c4m_A 796 Glycogen phosphorylase; allosteric control, phosph 99.92
1l5w_A 796 Maltodextrin phosphorylase; enzymatic catalysis, s 99.91
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 99.91
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 99.91
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 99.89
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 99.89
2gj4_A 824 Glycogen phosphorylase, muscle form; transferase; 99.88
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 99.87
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 99.86
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 99.86
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.85
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 99.78
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 99.76
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 99.75
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 99.74
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 99.56
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.53
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.49
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.49
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.35
2iyf_A430 OLED, oleandomycin glycosyltransferase; antibiotic 99.31
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 99.25
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 99.24
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 99.15
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 99.1
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 99.02
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 99.02
1ygp_A 879 Yeast glycogen phosphorylase; phosphorylated form, 98.96
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 98.92
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 98.57
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 98.5
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 98.45
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 98.24
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 98.24
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 98.21
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 98.0
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 97.89
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 96.22
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 95.81
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 95.43
3tov_A349 Glycosyl transferase family 9; structural genomics 94.21
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 91.6
2gt1_A326 Lipopolysaccharide heptosyltransferase-1; GT-B fol 89.83
3l7i_A729 Teichoic acid biosynthesis protein F; GT-B fold, m 81.41
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
Probab=100.00  E-value=8e-58  Score=509.82  Aligned_cols=445  Identities=41%  Similarity=0.669  Sum_probs=353.5

Q ss_pred             cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEE
Q 007370          147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI  226 (606)
Q Consensus       147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (606)
                      ..++.|||+||++|++|+.++||++.++..|+++|+++||+|+||+|.|+....       ..+......+.+.++...+
T Consensus         5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~-------~~~~~~~~~~~~~~~~~~~   77 (536)
T 3vue_A            5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKD-------AWDTSVVAEIKVADRYERV   77 (536)
T ss_dssp             ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTT-------CEEEEEEEEEEETTEEEEE
T ss_pred             cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhh-------hcccceEEEEEecCceEEE
Confidence            457789999999999999999999999999999999999999999999976422       2233344455566667778


Q ss_pred             EEEEeeeCCceEEEeeCCCCCCC------CCCCCCCC-CCCCchHHHHHHHHHHHhhhcccCCCC-----CCCCCCccEE
Q 007370          227 AFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLG-----GFTYGEKCIF  294 (606)
Q Consensus       227 ~~~~~~~~gv~v~~l~~~~~~~~------~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~PDII  294 (606)
                      .+++...+|+++++++++.|+.+      ..+|++.. .+|.|+..||.+|++++.+.+..+.+.     .+..+.+||+
T Consensus        78 ~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi  157 (536)
T 3vue_A           78 RFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF  157 (536)
T ss_dssp             EEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred             EEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence            88888999999999999987654      35676544 478999999999999998876554321     1223578899


Q ss_pred             EECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHH
Q 007370          295 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN  374 (606)
Q Consensus       295 h~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (606)
                      |||||++++++.+++..+...+.+.++|+|+|+||+.++|.++...+...+++..+.....+.    .......+...+|
T Consensus       158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~n  233 (536)
T 3vue_A          158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI----DGYDTPVEGRKIN  233 (536)
T ss_dssp             EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEE----ETTTSTTCEEEEE
T ss_pred             EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhh----hcccccccccchh
Confidence            999999999999999888777777899999999999999999888887777765543321110    0111122345578


Q ss_pred             HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccc-cchhHHHH
Q 007370          375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQCK  453 (606)
Q Consensus       375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~-~~~k~~~k  453 (606)
                      +++.++..||+|+|||+.+++++.+.. ++|+.-.......++.+|+||||++.|.|..+..++.+++... +++|..+|
T Consensus       234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k  312 (536)
T 3vue_A          234 WMKAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK  312 (536)
T ss_dssp             HHHHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred             HHHHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence            999999999999999999999987642 2333222234467899999999999999988877777776665 67999999


Q ss_pred             HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCCh
Q 007370          454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV  533 (606)
Q Consensus       454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~  533 (606)
                      ..+++++|++.+++.|+|+|+||+.++||++.+++|++++.+++.+|+++|.|+......++.....+..++.....++.
T Consensus       313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~  392 (536)
T 3vue_A          313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA  392 (536)
T ss_dssp             HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred             HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence            99999999998888999999999999999999999999998889999999999887777788888888888988888888


Q ss_pred             hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccccccc--ccceeeeecCCc
Q 007370          534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVV--KVQGGPFCHYQK  603 (606)
Q Consensus       534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~--~~nG~~f~~~~~  603 (606)
                      +.+..+|++||++|+||.+|+||++++|||+||+|||+|++||++|+|.|+.+|....  .++|++|+..|+
T Consensus       393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~  464 (536)
T 3vue_A          393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDV  464 (536)
T ss_dssp             HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHH
T ss_pred             HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCH
Confidence            8888999999999999999999999999999999999999999999999997544222  223445555444
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 606
d1rzua_477 c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte 6e-81
d2bisa1437 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro 5e-32
d2bfwa1196 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py 6e-10
d2f9fa1166 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ 0.003
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  260 bits (665), Expect = 6e-81
 Identities = 151/428 (35%), Positives = 211/428 (49%), Gaps = 30/428 (7%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
           N++ V++E  P  KTGGL DV G+LP+AL A G R   + P Y              D  
Sbjct: 2   NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY------PAVKAAVTDPV 55

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 270
            C +     GE +        E +D + +D P+Y  R G PY    G  + DN  R+  L
Sbjct: 56  KCFEFTDLLGE-KADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAAL 114

Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
             AA      +  G        +   +DW A + PV +     P        S+L IHN+
Sbjct: 115 SLAAARIGAGVLPGW----RPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTIHNI 165

Query: 331 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390
           + QG   A  +  L LP+  +G     +              V+ LKG + TA  L TVS
Sbjct: 166 AFQGQFGANIFSKLALPAHAFGMEGIEYY-----------NDVSFLKGGLQTATALSTVS 214

Query: 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKV 450
             Y+ EI T E G GL  ++ SR  VL+GI NGID   WNP++D  I  +YS  +L  + 
Sbjct: 215 PSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRA 274

Query: 451 QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQF 510
             K A+ +   +      PL   I RL +QKGIDL+  A  EI++   + V+LG+GD   
Sbjct: 275 LNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL 333

Query: 511 ESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 570
           E  +    + +  +    +G+N P+SH + AGCD +++PSRFEPCGL QLYA+RYG IPV
Sbjct: 334 EGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393

Query: 571 VHATGGLR 578
           V  TGGL 
Sbjct: 394 VARTGGLA 401
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Length = 166 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query606
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 100.0
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 100.0
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 99.97
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.88
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 99.8
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 99.75
d1l5wa_ 796 Maltodextrin phosphorylase (MALP) {Escherichia col 99.35
d2gj4a1 824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 99.27
d1ygpa_ 876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 98.56
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 98.15
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 98.12
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 98.12
d1iira_401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 97.53
d1v4va_373 UDP-N-acetylglucosamine 2-epimerase {Thermus therm 96.46
d2acva1461 Triterpene UDP-glucosyl transferase UGT71G1 {Medic 96.35
d1o6ca_377 UDP-N-acetylglucosamine 2-epimerase {Bacillus subt 95.93
d2c1xa1450 UDP glucose:flavonoid 3-o-glucosyltransferase {Gra 95.02
d1f6da_376 UDP-N-acetylglucosamine 2-epimerase {Escherichia c 93.74
d2vcha1471 Hydroquinone glucosyltransferase {Thale cress (Ara 90.89
d1pswa_348 ADP-heptose LPS heptosyltransferase II {Escherichi 87.59
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 82.11
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.2e-50  Score=440.92  Aligned_cols=424  Identities=35%  Similarity=0.546  Sum_probs=335.3

Q ss_pred             ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeee--CCeeEEEEE
Q 007370          152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF--GGEQEIAFF  229 (606)
Q Consensus       152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  229 (606)
                      |||++|+++++|+.++||++.++..|+++|+++||+|+||+|.|+....      .   ..+.+.+...  ..+..+.++
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~------~---~~~~~~~~~~~~~~~~~~~~~   71 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKA------A---VTDPVKCFEFTDLLGEKADLL   71 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHH------H---CCSCEEEEEESCSSSCCEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhh------h---cccceEEEEEeccCCceEEEE
Confidence            9999999999998789999999999999999999999999998754210      0   1111111111  223345667


Q ss_pred             EeeeCCceEEEeeCCCCCC-CCCCCCCCC-CCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHH
Q 007370          230 HEYREGVDWVFVDHPSYHR-PGNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL  307 (606)
Q Consensus       230 ~~~~~gv~v~~l~~~~~~~-~~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~  307 (606)
                      +...+++++++++++.|+. ...+|.... ..|.++..++..++.++.+...... .+|   +|||||+|+|++++.+.+
T Consensus        72 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~pDIvH~h~~~~~l~~~~  147 (477)
T d1rzua_          72 EVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL-PGW---RPDMVHAHDWQAAMTPVY  147 (477)
T ss_dssp             EEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS-SSC---CCSEEEEEHHHHTTHHHH
T ss_pred             EEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcc-cCC---CCCEEEecchhHHHHHHH
Confidence            7788999999999877543 334554433 4778888898888888776654331 233   899999999999888887


Q ss_pred             HHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccc
Q 007370          308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL  387 (606)
Q Consensus       308 l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi  387 (606)
                      +.....     .++|+|+|+|+..+...++...+..++.+..++....+           ......++++..+..+|.++
T Consensus       148 ~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~~~  211 (477)
T d1rzua_         148 MRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGI-----------EYYNDVSFLKGGLQTATALS  211 (477)
T ss_dssp             HHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTT-----------EETTEEEHHHHHHHHCSEEE
T ss_pred             HHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhcccccc-----------cccchhHHHHHHHHhhhhhh
Confidence            765442     68999999999987777666666656555444332211           12333456777888999999


Q ss_pred             cCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370          388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD  467 (606)
Q Consensus       388 ~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~  467 (606)
                      ++|..+.+.+.....+.+..........++.+|+||+|.+.|.|.....++.+++.+.......++..++.+.+++ +++
T Consensus       212 ~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  290 (477)
T d1rzua_         212 TVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID-DDG  290 (477)
T ss_dssp             ESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCC-CSS
T ss_pred             hccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccc-cCC
Confidence            9999999887766555555556666678999999999999999988777777888888888888899999999997 356


Q ss_pred             CCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEE
Q 007370          468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL  547 (606)
Q Consensus       468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v  547 (606)
                      .++|+|+||+.++||++.|++|++++.+.+.+|+++|.|+......++.+......++.+..+++++....+|++||++|
T Consensus       291 ~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v  370 (477)
T d1rzua_         291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAII  370 (477)
T ss_dssp             SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred             ccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCcccc
Confidence            78999999999999999999999998888999999999987767777777778888888888888888888999999999


Q ss_pred             EcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccc-cceeeeecCCccC
Q 007370          548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVK-VQGGPFCHYQKKA  605 (606)
Q Consensus       548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~-~nG~~f~~~~~~~  605 (606)
                      +||.+|+||++++|||+||+|||+|++||++|+|.|++.++.... .||++|+..|+++
T Consensus       371 ~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~  429 (477)
T d1rzua_         371 IPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDG  429 (477)
T ss_dssp             ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred             CCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHH
Confidence            999999999999999999999999999999999999876655432 4899999998764
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Back     information, alignment and structure
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure