Citrus Sinensis ID: 007425


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600----
MSSNHLLIESDKEHETLDRSSASNFFSGSLSTPSSRQSSPRMEPSRFLKKMKRKGEKAWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYHGRKTNAFVNSSSVSVKKELKKFGKGKRSQYGVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
ccccccEEEccccccccccccccccccccccccccccccccccccHHHHHccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHccEEEcccccccccccccccccccccHHHHHHHccccEEEEccccHHHHcccccccccccccccccccccHHHHHHHcHHHHHHccEEEEEccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccccccccEEEEEEcHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccHHHHccccccccHHHHHHHHHHcccccccEEEEEEEEEEccccccHHHHHHcccccHHccccccccccccccccccccccEEEEEccccEEEEcccccHHHHHHHHcHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccc
ccccEEEEEcccccccccEEEEcccccccccccccccccccccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEEHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEccccHHHccccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHccccccccccccccccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcEcccccHHHHHHHHHccccccHHHcccHHHHHHccccHHHHHHHHHHEEccccEEEEccccccHHHHHHHHHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccEccccccccccccc
mssnhlliesdkehetldrssasnffsgslstpssrqssprmepSRFLKKMKRKGEKAWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYhgrktnafvnSSSVSVKKELKkfgkgkrsqygVYGRMLALAAHALAegqnkrepkdlwrepvvpasawmpcadqrnwepsggnngYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMyssvwrdvsqfsdiyQEEHfinyltpdiRMVKELPNklqsldleaigsvvtdvdipkeskpsfylkniipillRNGVVHLLGfgnrlafdpipfqLQRLRCRcnfhalqfaPKIQETGALLLRRLRkheghsgpldhylvgpyadsimkekrgqsaKASRYLAIHLRFEIDMVAHSLcefgggeeeRQELEKYREIHFPALAHlkkttklpspaeirseglcpltpEEAVLMLAALGFNRKTHVFVAGaqiyggtrrlgalnslypylvtkenllsatelepfknfssQLAALDFIGCTaanafamtdsgsqlSSLVSGYriyygggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKhiqsrskgrsvyryprckecmcptd
mssnhlliesdkehetldrssasnffsgslstpssrqssprmepsrflkkmkrkgekawykrkrvksLVGVIGLICFFFVVNWFMLVRLQYHGRktnafvnsssvsvkkelkkfgkgkrsqygVYGRMLALAAHALAegqnkrepkdlWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSvvtdvdipkeskpsfYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEghsgpldhylvGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALahlkkttklpspaEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAmtdsgsqlSSLVSGYRIYYGggkmptirpnKRRLAAIFVKNSTIEWKVFEQRVRKavrqtkhiqsrskgrsvyryprckecmcptd
MSSNHLLIESDKEHETLDRssasnffsgslstpssrqssPRMEPSRFLKKMKRKGEKAWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYHGRKTNAFvnsssvsvkkelkkfgkgkRSQYGVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCefgggeeerqelekyreIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
*********************************************************AWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYHGRKTNAFVNS**********KFGKGKRSQYGVYGRMLALAAHALA*********DLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSI**********ASRYLAIHLRFEIDMVAHSLCEFGGG******LEKYREIHFPALAHLKK************EGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVR*************VYRYPRCKE******
*****LL***************************************************WYKRKRVKSLVGVIGLICFFFVVNWFMLVR*****************************************************************VPASAWM****************YILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKH**********LVGPYAD**********AKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKL********EGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFE***********************RYPRCKECMCPT*
MSSNHLLIESDKEHETLDRSSASNF*********************************WYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYHGRKTNAFVNSSSVSVKKELKKFGKGKRSQYGVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMK*********SRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVR*****************VYRYPRCKECMCPTD
*************HETLDRSSASNF******************P*R*******KGEKAWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQY*************************GKRSQYGVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHE*HSGPLDHYLVGPYADSIMKEKR*QSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCP**
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSNHLLIESDKEHETLDRSSASNFFSGSLSTPSSRQSSPRMEPSRFLKKMKRKGEKAWYKRKRVKSLVGVIGLICFFFVVNWFMLVRLQYHGRKTNAFVNSSSVSVKKELKKFGKGKRSQYGVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query604 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.624 0.726 0.327 3e-56
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  220 bits (560), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 226/433 (52%), Gaps = 56/433 (12%)

Query: 149 WREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAICNAVVLARLLNATLV 208
           WR    P S W P        P+   NGY+ V  NGG+NQQR AICNAV+ AR++NATLV
Sbjct: 71  WRPSSAPRSDWPP--------PTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATLV 122

Query: 209 VPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVDI 268
           +P+   +S W D S F  IY  EHFI  L  D+++V ++P+  ++   + I +    +  
Sbjct: 123 LPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAF--QIRP 180

Query: 269 PKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQ 328
           P+++   +YL   +  +  +  ++L  F +RLA +    + QRLRCR N+HAL+F P I 
Sbjct: 181 PRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIM 240

Query: 329 ETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAH 388
           +    ++ +LR  +GH                             +++IHLRFE+DM+A 
Sbjct: 241 KLSESIVDKLRS-QGH-----------------------------FMSIHLRFEMDMLAF 270

Query: 389 SLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAA 448
           + C      EE++ L KYR+ +F          K     E R+ G CPLTPEE  L+L A
Sbjct: 271 AGCFDIFNPEEQKILRKYRKENF--------ADKRLIYNERRAIGKCPLTPEEVGLILRA 322

Query: 449 LGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQL--AAL 506
           + F+  T +++A  +++GG + +    +L+P L   +N  S    E     S  L  +A+
Sbjct: 323 MRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL---DNHSSVDPSEELSATSQGLIGSAV 379

Query: 507 DFIGCTAANAFAMT-DSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAAIFVKNSTIEWK 565
           D++ C  ++ F  T D  S  ++ + G+R+YYG     TIRP+++ LA IF+     +  
Sbjct: 380 DYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRT--TIRPDRKALAPIFIAREKGKRA 437

Query: 566 VFEQRVRKAVRQT 578
            FE+ VR+ + +T
Sbjct: 438 GFEEAVRRVMLKT 450





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query604
359494826617 PREDICTED: DUF246 domain-containing prot 0.963 0.943 0.733 0.0
297741763 717 unnamed protein product [Vitis vinifera] 0.902 0.760 0.762 0.0
255554775642 conserved hypothetical protein [Ricinus 0.918 0.864 0.759 0.0
356564474579 PREDICTED: DUF246 domain-containing prot 0.900 0.939 0.752 0.0
356520091583 PREDICTED: DUF246 domain-containing prot 0.900 0.933 0.753 0.0
224117960467 predicted protein [Populus trichocarpa] 0.769 0.995 0.830 0.0
224113753465 predicted protein [Populus trichocarpa] 0.769 1.0 0.830 0.0
449455459672 PREDICTED: DUF246 domain-containing prot 0.956 0.860 0.648 0.0
357480375620 hypothetical protein MTR_4g132590 [Medic 0.937 0.912 0.720 0.0
449513539672 PREDICTED: DUF246 domain-containing prot 0.956 0.860 0.651 0.0
>gi|359494826|ref|XP_002271717.2| PREDICTED: DUF246 domain-containing protein At1g04910-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/590 (73%), Positives = 501/590 (84%), Gaps = 8/590 (1%)

Query: 18  DRSSASNFFSGSLSTPSSRQSSPRMEPSRFLKKMKRKGEKAWYKRKRVKSLVGVIGLICF 77
           D  S S   S SLS   S   S + E  +   + +RK  + W++R RVK +VGVIG +  
Sbjct: 33  DSGSGSAQESSSLSRLHSAHRSSQDE--KIHPRARRKVGRVWHRR-RVKVIVGVIGSVGL 89

Query: 78  FFVVNWFMLVRL--QYHGRKTNA-FVNSSSVSVKKELKKFGKGKRSQYGVYGRMLALAAH 134
           FF+ NW+ML RL    HG K+++   NSS +SV+  LKK  KG+R Q  ++ RMLALAAH
Sbjct: 90  FFLTNWWMLSRLYDAGHGVKSSSRIANSSLISVQGGLKKPNKGERPQ--IHSRMLALAAH 147

Query: 135 ALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTANGGMNQQRVAIC 194
           ALA+GQNK EPK LW EPVVPAS W PCA QRNWEPS GNNGYIL+TANGG+NQQRVA+C
Sbjct: 148 ALADGQNKPEPKGLWEEPVVPASVWRPCAHQRNWEPSEGNNGYILITANGGINQQRVAVC 207

Query: 195 NAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSL 254
           NAVV+AR LNATLVVPKF++SSVWRDVSQFSDIYQEEHF+NYLTPDIR+VKELP +LQSL
Sbjct: 208 NAVVIARFLNATLVVPKFLFSSVWRDVSQFSDIYQEEHFVNYLTPDIRIVKELPKELQSL 267

Query: 255 DLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRLRC 314
           DLEAIGSVVTDVDI KESK SFY KNI+PILL+  VVH +GFGNRLAFDPIPF+LQRLRC
Sbjct: 268 DLEAIGSVVTDVDIMKESKLSFYRKNILPILLQKRVVHFVGFGNRLAFDPIPFELQRLRC 327

Query: 315 RCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRY 374
           RCNFHAL+F PKIQETGALLL+++R++   SGPLDHYLVGP+A+S MK K+ ++AK+SRY
Sbjct: 328 RCNFHALRFVPKIQETGALLLKKMRQNVRRSGPLDHYLVGPFAESTMKGKKNRAAKSSRY 387

Query: 375 LAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGL 434
           LA+HLRFEIDMVAHSLC+FGGGEEERQELE YREIHFPALA LKKTTKLPSP E+R++G 
Sbjct: 388 LALHLRFEIDMVAHSLCDFGGGEEERQELEAYREIHFPALALLKKTTKLPSPEELRADGQ 447

Query: 435 CPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELE 494
           CPLTPEE VLML ALGFNRKTH+F+AG+QIYGG  RL AL +LYP LVTKENLLS++E+E
Sbjct: 448 CPLTPEETVLMLVALGFNRKTHIFLAGSQIYGGRSRLAALTTLYPNLVTKENLLSSSEIE 507

Query: 495 PFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPNKRRLAA 554
           PFKNFSSQLAALDFIGCTAA+AFA+TDSGSQLSSLVSGYRIYYGGG++PT+RPNKRRLA+
Sbjct: 508 PFKNFSSQLAALDFIGCTAADAFAITDSGSQLSSLVSGYRIYYGGGRLPTVRPNKRRLAS 567

Query: 555 IFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMCPTD 604
           IF+KNSTIEW +FE+RVRKAVRQTK I  RS  RSVYR PRC+ECMC T+
Sbjct: 568 IFLKNSTIEWSMFEKRVRKAVRQTKTIHRRSISRSVYRNPRCRECMCTTE 617




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741763|emb|CBI32992.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255554775|ref|XP_002518425.1| conserved hypothetical protein [Ricinus communis] gi|223542270|gb|EEF43812.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356564474|ref|XP_003550479.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|356520091|ref|XP_003528699.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|224117960|ref|XP_002331523.1| predicted protein [Populus trichocarpa] gi|222873747|gb|EEF10878.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113753|ref|XP_002316562.1| predicted protein [Populus trichocarpa] gi|222859627|gb|EEE97174.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449455459|ref|XP_004145470.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357480375|ref|XP_003610473.1| hypothetical protein MTR_4g132590 [Medicago truncatula] gi|357497961|ref|XP_003619269.1| DUF246 domain-containing protein [Medicago truncatula] gi|355494284|gb|AES75487.1| DUF246 domain-containing protein [Medicago truncatula] gi|355511528|gb|AES92670.1| hypothetical protein MTR_4g132590 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449513539|ref|XP_004164352.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query604
TAIR|locus:2027129652 AT1G62330 [Arabidopsis thalian 0.798 0.739 0.730 1.2e-199
TAIR|locus:2008935590 AT1G11990 [Arabidopsis thalian 0.490 0.501 0.567 5.7e-178
TAIR|locus:2029984611 AT1G29200 [Arabidopsis thalian 0.894 0.883 0.493 1.7e-137
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.337 0.366 0.369 4.7e-72
TAIR|locus:2049527567 AT2G01480 [Arabidopsis thalian 0.394 0.419 0.353 1.2e-71
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.754 0.904 0.349 2.4e-69
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.334 0.367 0.387 3.4e-68
TAIR|locus:2006852562 AT1G14970 [Arabidopsis thalian 0.395 0.425 0.348 4.4e-68
TAIR|locus:2121909519 AT4G24530 [Arabidopsis thalian 0.756 0.880 0.335 1.9e-67
TAIR|locus:2014666568 AT1G35510 [Arabidopsis thalian 0.322 0.343 0.422 2.2e-67
TAIR|locus:2027129 AT1G62330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1876 (665.4 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
 Identities = 353/483 (73%), Positives = 400/483 (82%)

Query:   123 GVYGRMLALAAHALAEGQNKREPKDLWREPVVPASAWMPCADQRNWEPSGGNNGYILVTA 182
             G YGR+LA AAHALAEGQNK EPK+LWREP   A AW PCADQR+W+PS G NGYI+VTA
Sbjct:   170 GTYGRLLAYAAHALAEGQNKLEPKELWREPKDQALAWKPCADQRSWKPSDGKNGYIMVTA 229

Query:   183 NGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIR 242
             NGG+NQQRVA+CN VV+AR+LNATLV+PKFM+S VW D SQF DIYQ EHFI YL+PDIR
Sbjct:   230 NGGINQQRVAVCNIVVVARMLNATLVIPKFMFSDVWTDASQFGDIYQVEHFIKYLSPDIR 289

Query:   243 MVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAF 302
             +VK+LP +LQSLDLEAIGSVVTD+D+ KE+KP FY+K+I+P+LL+N VVH LGFGNRLAF
Sbjct:   290 IVKKLPKELQSLDLEAIGSVVTDIDVMKEAKPGFYMKHILPLLLKNRVVHFLGFGNRLAF 349

Query:   303 DPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGP-YADSIM 361
             DPIPF+LQRLRCRCNFHAL F PKIQETGA+L+RRLR    H  P+D YLVGP +A  I+
Sbjct:   350 DPIPFELQRLRCRCNFHALNFVPKIQETGAILVRRLRDSGSHLAPVDPYLVGPKFASFIL 409

Query:   362 KEKRGQSAKASRYLAIHLRFEIDMVAHSLCXXXXXXXXXXXXXXXXXIHFPALAHLKKTT 421
              +K G   KAS+YLA+HLRFEIDMVAHSLC                  HFP LA+L KT 
Sbjct:   410 DKKAGPLHKASKYLAVHLRFEIDMVAHSLCYFGGGDAEKAELDAYREKHFPTLANLTKTQ 469

Query:   422 KLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYL 481
             K+PSP ++R+EGLCPL+PEEAVLMLA LGF+RKT VFVAGA IYGG +RL AL SLYP L
Sbjct:   470 KMPSPDDLRTEGLCPLSPEEAVLMLAGLGFSRKTRVFVAGANIYGGNKRLAALTSLYPNL 529

Query:   482 VTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGK 541
             VTKEN+LS TELEPFKNFSSQLA LDFI C A++AFAMTDSGSQLSSLVSGYRIYYG GK
Sbjct:   530 VTKENVLSQTELEPFKNFSSQLAVLDFIACAASDAFAMTDSGSQLSSLVSGYRIYYGAGK 589

Query:   542 MPTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTKHIQSRSKGRSVYRYPRCKECMC 601
             MPTIRPNKRR + I +KN+TIEWKVFEQRVRK VRQTKH+  R  GRSVYRYPRCKECMC
Sbjct:   590 MPTIRPNKRRFSDILLKNNTIEWKVFEQRVRKTVRQTKHVLVRPTGRSVYRYPRCKECMC 649

Query:   602 PTD 604
               D
Sbjct:   650 NED 652


GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2008935 AT1G11990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.XI.1485.1
hypothetical protein (462 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query604
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-137
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-107
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 7e-05
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 3e-04
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  402 bits (1035), Expect = e-137
 Identities = 153/365 (41%), Positives = 204/365 (55%), Gaps = 76/365 (20%)

Query: 177 YILVTANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINY 236
           Y+LV+ANGG+NQQR  IC+AV +ARLLNATLV+P+   +SVW D S+F DIY  +HFI  
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 237 LTPDIRMVKELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGF 296
           L  D+R+VK+LP +L S   E     +T   +P  S PS+YL+ ++P+L ++GV+ L  F
Sbjct: 61  LKDDVRVVKKLPEELASKKPE-----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPF 115

Query: 297 GNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPY 356
            +RLA D +P ++QRLRCR NFHAL+F P+I+E G  L+ RLR+  G             
Sbjct: 116 DSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGG------------- 162

Query: 357 ADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAH 416
                            +LA+HLRFE DM+A S C                         
Sbjct: 163 ----------------PFLALHLRFEKDMLAFSGC------------------------- 181

Query: 417 LKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNS 476
                           G CPLTPEE  L+L ALGF R T +++A  +IYGG RRL  L S
Sbjct: 182 ----------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRS 225

Query: 477 LYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIY 536
           ++P L TKE L +A EL PF   SS+LAALD+I C  ++ F  T  G   +  V+G+R Y
Sbjct: 226 IFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGG-NFAKAVAGHRRY 284

Query: 537 YGGGK 541
            G  K
Sbjct: 285 LGHRK 289


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 604
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 95.79
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 90.46
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=5.1e-57  Score=460.08  Aligned_cols=308  Identities=39%  Similarity=0.602  Sum_probs=210.6

Q ss_pred             ecCchhhHHHHHHHHHHHHHHhcCeEEeccccCCCcccCCCC-----CCcccchHHHHHhcCCCeEEeccCchhhhchhh
Q 007425          182 ANGGMNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQ-----FSDIYQEEHFINYLTPDIRMVKELPNKLQSLDL  256 (604)
Q Consensus       182 ~nGGLNQqR~~IcDaVaVARiLNATLViP~l~~ss~W~D~S~-----F~DIFD~dhFI~~Lk~DVrIVk~LP~~~~~~~~  256 (604)
                      +.||+|+||.++++||++|++||+|||||.+...+.|+|.++     |+|+||+++|+++++++|.+.+.+|..+.....
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            899999999999999999999999999999999999999988     999999999999999999999999987765422


Q ss_pred             hhh------------------------cccccccCCCC-CCChHHHHHhhhhhhhhc------CeEEEeccCCcccCCCC
Q 007425          257 EAI------------------------GSVVTDVDIPK-ESKPSFYLKNIIPILLRN------GVVHLLGFGNRLAFDPI  305 (604)
Q Consensus       257 ~~~------------------------~~~~~~~~v~~-~s~~~~Y~~~VLP~L~k~------~VI~l~~f~~RLa~d~l  305 (604)
                      ...                        +.......... ++.+.+|+++++|++.++      +|+.|.++..++..+..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            100                        00011122233 778889999999999987      99999999999999888


Q ss_pred             chhhhhhhhhhcccccccchhHHHHHHHHHHHHhccCCCCCCCCccccCCccchhhhhhhcccccCCceEEEeechhhhh
Q 007425          306 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDM  385 (604)
Q Consensus       306 P~diQrLRCrvnF~ALrF~p~I~~lg~~LV~RLR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gkylALHLRfE~DM  385 (604)
                      +.++||        +|+|+++|+++|+++|++++..+                             ++|||||||+|+||
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~-----------------------------~~yiavHlR~~~D~  208 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLAGG-----------------------------GPYIAVHLRRGKDW  208 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH---------------------------------SSEEEEEE--SHHH
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhccc-----------------------------CceEEEeecccCch
Confidence            999988        99999999999999999999332                             34999999999999


Q ss_pred             hhhccccCCCchhHHHHHHHHHHhhcchhhhccccCCCCChHhhhcCCCCCCCHHHHHHHHHHhCCCCCcEEEEEeceec
Q 007425          386 VAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIY  465 (604)
Q Consensus       386 lA~SgC~~ggg~~E~~EL~~~R~~~~~~~~~~~k~~~~i~~~~~R~~G~CPLTPeEvgl~L~ALGf~~~T~IYlA~geiY  465 (604)
                        +++|.+++   ++..|+.+|...          .+.+.+...+..|.||++|++++.+++++|+.+.|.||||++++|
T Consensus       209 --~~~C~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~  273 (351)
T PF10250_consen  209 --FSACEFKG---ERHLLASPRCWG----------KKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIY  273 (351)
T ss_dssp             --HHHHCT-T-------TTTHHHH-----------GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS--
T ss_pred             --HhhcccCC---chHHHHHhHhhc----------cccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCccc
Confidence              88999955   778888888641          122456788899999999999999999999999999999999999


Q ss_pred             cccccchhhHhhCCCccccccCCCccccccccccccccchheeeeeccCceeeeCCCCCchhhhhhcccccccCCCCcc
Q 007425          466 GGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPT  544 (604)
Q Consensus       466 GG~~~L~pL~~~FPnl~tKetLas~eEL~pF~~~sS~lAALDYiVcl~SDVFV~t~~G~nma~lV~GhR~y~G~~~~kT  544 (604)
                      ||...|.+|++.||++++|+++.+.+|+++|.+  .++|+||++||++||+||+|. ||+|+..|+++|.|.|+.++||
T Consensus       274 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~-~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  274 GGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTC-GSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             ---------HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-T-T-HHHHHHHHHHHHSSSS---E
T ss_pred             ccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecC-cchhHHHhhcccCcCCCCCCCC
Confidence            999999999999999999999999999999996  889999999999999999999 6789999999999999886554



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query604
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 7e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.8 bits (123), Expect = 7e-07
 Identities = 70/448 (15%), Positives = 126/448 (28%), Gaps = 139/448 (31%)

Query: 195 NAVVLARLLNATL------VVPKFM-------YSSVW-------RDVSQFSDIYQEEH-- 232
           +AV     L  TL      +V KF+       Y  +        R  S  + +Y E+   
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 233 -------FINYLTPDIRMVKELPNKLQSLDLEA---------IG-SVVT-DVDIPKESKP 274
                  F  Y    ++   +L   L  L              G + V  DV        
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV-------- 170

Query: 275 SFYLKNIIPILLRNGVVHLLGFGNRLAFDPIPFQLQRL--RCRCNFHALQFA----PKIQ 328
                +       +  +  L   N  + + +   LQ+L  +   N+ +            
Sbjct: 171 ---CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 329 ETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKRGQSAKA----------SRYLAIH 378
            +    LRRL K + +   L   LV     ++   +  ++  A          +R+  + 
Sbjct: 228 HSIQAELRRLLKSKPYENCL---LV---LLNV---QNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 379 LRFEIDMVAH-SLCEFGGGEEERQELE---KYREIHFPALAHLKKTTKLPSP------AE 428
                    H SL          +      KY +     L     TT   +P      AE
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT---NPRRLSIIAE 335

Query: 429 IRSEGLC----------------------PLTPEEAVLMLAALGFNRKTHVFVAGAQIYG 466
              +GL                        L P E   M   L       VF   A I  
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS------VFPPSAHIPT 389

Query: 467 GTRRLGALNSLYPYLVTKENLLSATELEPF-------KNFSSQLAALDF-IGCTAANAFA 518
                  L+ ++  ++  + ++   +L  +       K  +  + ++   +     N +A
Sbjct: 390 IL-----LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444

Query: 519 MTDSGSQLSSLVSGYRI---YYGGGKMP 543
           +        S+V  Y I   +     +P
Sbjct: 445 LHR------SIVDHYNIPKTFDSDDLIP 466


>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query604
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.51
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.97
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 95.76
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 94.92
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.51  E-value=1e-13  Score=145.42  Aligned_cols=307  Identities=21%  Similarity=0.203  Sum_probs=169.3

Q ss_pred             CCCCCceEEEEec-C-chhhHHHHHHHHHHHHHHhcCe----EEeccccCCCcccCC------CCCCcccchHHHHHhcC
Q 007425          171 SGGNNGYILVTAN-G-GMNQQRVAICNAVVLARLLNAT----LVVPKFMYSSVWRDV------SQFSDIYQEEHFINYLT  238 (604)
Q Consensus       171 ~~~snGYL~V~~n-G-GLNQqR~~IcDaVaVARiLNAT----LViP~l~~ss~W~D~------S~F~DIFD~dhFI~~Lk  238 (604)
                      ....++||+-..| | |.|.||...-.|.++|+.||.|    ||||-+..-.-|.-.      -.|++.||++.+-    
T Consensus        18 ~~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L~----   93 (408)
T 4ap5_A           18 AASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLN----   93 (408)
T ss_dssp             --CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHHH----
T ss_pred             CccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHHH----
Confidence            3567899999864 5 8999999999999999999999    999977543445443      3699999998743    


Q ss_pred             CCeEEeccCchhhhc-------------------------hhhhhhcc-----cccccCCCCCCChHHHH----------
Q 007425          239 PDIRMVKELPNKLQS-------------------------LDLEAIGS-----VVTDVDIPKESKPSFYL----------  278 (604)
Q Consensus       239 ~DVrIVk~LP~~~~~-------------------------~~~~~~~~-----~~~~~~v~~~s~~~~Y~----------  278 (604)
                      ..|.|+.-  +++..                         .+......     ...........++.|=.          
T Consensus        94 ~~vpVI~m--eeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c  171 (408)
T 4ap5_A           94 KNIPVIEY--EQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSC  171 (408)
T ss_dssp             TTSCEEEH--HHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEE
T ss_pred             hhCCeeEH--HHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCcee
Confidence            34445421  11100                         00000000     00000000001122211          


Q ss_pred             -------Hhhhhhhhhc---CeEEEeccCCcccCCCCchhhhhhhhhhcccccccchhHHHHHHHHHHHHhccCCCCCCC
Q 007425          279 -------KNIIPILLRN---GVVHLLGFGNRLAFDPIPFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPL  348 (604)
Q Consensus       279 -------~~VLP~L~k~---~VI~l~~f~~RLa~d~lP~diQrLRCrvnF~ALrF~p~I~~lg~~LV~RLR~~~~~~~~~  348 (604)
                             ..+-|.+.+.   .-+-+..+...|+.-.-..+...+|     ..|+|++.|.+.|+..++..-.....   .
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~~~~~---~  243 (408)
T 4ap5_A          172 LSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLNSTDD---A  243 (408)
T ss_dssp             EEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHCCCTT---T
T ss_pred             EEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhCcccc---e
Confidence                   1122334332   2233333444443222223333333     47999999999999998876532110   0


Q ss_pred             CccccCCccchhhhhhhcccccCCceEEEeechhhhhhhhccccCCCchhHHHHHHHHHHhhcchhhhccccCCCCChHh
Q 007425          349 DHYLVGPYADSIMKEKRGQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPSPAE  428 (604)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~gkylALHLRfE~DMlA~SgC~~ggg~~E~~EL~~~R~~~~~~~~~~~k~~~~i~~~~  428 (604)
                      + .+..+ +.-...........+|+|+|+|+|-+.=+.++..|...    .+...+                        
T Consensus       244 ~-h~r~~-~dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~~~~ps----~~~~~~------------------------  293 (408)
T 4ap5_A          244 D-RIPFQ-EDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPS----LEGAVR------------------------  293 (408)
T ss_dssp             T-TCCCC-SSGGGCCCCTTCBCCEEEEEEEECCTTTTTTTCSSSCC----HHHHHH------------------------
T ss_pred             e-ecccc-hhHhhhhcccccccCCCccccccccccchhhhhccCCC----HHHHHH------------------------
Confidence            0 00000 00000011112344678999999976323333333211    111111                        


Q ss_pred             hhcCCCCCCCHHHHHHHHHHhCCCCCcEEEEEeceeccccccchhhHhhCCCccccccCCCccccccccccccccchhee
Q 007425          429 IRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKENLLSATELEPFKNFSSQLAALDF  508 (604)
Q Consensus       429 ~R~~G~CPLTPeEvgl~L~ALGf~~~T~IYlA~geiYGG~~~L~pL~~~FPnl~tKetLas~eEL~pF~~~sS~lAALDY  508 (604)
                                  .+.-+++..   +-+.||||+-+.   +..+..|++.+|.++.-..  ..+++.++.  ...+|.||-
T Consensus       294 ------------~i~~~~~~~---~~~~VyiATD~~---~~~~~~l~~~~~~~~~~~~--~~~~~~~~~--d~~~a~idq  351 (408)
T 4ap5_A          294 ------------KIRSLMKTH---RLDKVFVATDAV---RKEYEELKKLLPEMVRFEP--TWEELELYK--DGGVAIIDQ  351 (408)
T ss_dssp             ------------HHHHHHHHH---TCSCEEEEECCC---HHHHHHHHHHCTTEECCCC--CHHHHHHHH--HHHHHHHHH
T ss_pred             ------------HHHHHHHhc---CCCEEEEeCCCc---hhHHHHHHHhCCCcEEecC--cchhhhccC--cchhhHHHH
Confidence                        111222222   234699998742   4457889999998764322  233444443  345789999


Q ss_pred             eeeccCceeeeCCCCCchhhhhhcccccccCCCCcc
Q 007425          509 IGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPT  544 (604)
Q Consensus       509 iVcl~SDVFV~t~~G~nma~lV~GhR~y~G~~~~kT  544 (604)
                      +||.+||+||+|.. |.|+..|.=.|-+.|+....|
T Consensus       352 ~Ic~~a~~FiGt~~-StfS~~I~~eR~~~G~~~~~t  386 (408)
T 4ap5_A          352 WICAHARFFIGTSV-STFSFRIHEEREILGLDPKTT  386 (408)
T ss_dssp             HHHHTEEEEEBCTT-CHHHHHHHHHHHHHTBCGGGT
T ss_pred             HHHHhCCeeEeCCc-CchhHHHHHHHHhcCCCCCcc
Confidence            99999999999985 479999999999999865333



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00