Citrus Sinensis ID: 007443

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600---
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
cccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccEEEEcccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHcHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHccccccEEEccccHHHHHHHHHHHHccccccEEEEcccccccccccccccccccEEEEEEcccEEEEEEccHHHHHHHHcc
ccccccccccEccEEEEEcccccccccccccccccccccHHHHHccccccccccccccEEEEEccccccccccccccccccHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEHHHHccccccEEEEEccccccccHHccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEccccccHHHHHccEEEcccccccHHHHHHHHHHHHcccccccEEEEEEEccccccccHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccEEEEcccEEEEEEcccHHHHHHEcc
mvtpsakyplelpltahchgtldqRKIEFLSSNISRELEIsrinlcpssssitssklVTVSRicalpdiddffwdkeptpildlvenplrlkSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHvfhapvdkilwdvgeQTYAHKILTGRRSLIHTLRkkdgisgytsrseseydpfnaghgcnsvsAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMsnagyldsnmIVILNdsrhslhpkieespktSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYargmigpqgstLFEELGlyyigpvdghNIEDLISVLQEVASLGSMGPVLVHVVTEenrraedtqKSEAIEKQqegasdsnslpfgnysrtydDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSaglacgglkpfciipsAFLQRAYDQVVndvdqqrlpVRFVITsaglvgsdgptqcgafditfmsclpnmivmapsdedELVDMVATVasiddrpvcfryprgaivrtdlpgyrgipieVVTRHASCTCLIITFEMLLCFLHVLV
mvtpsakyplelpltahchgtlDQRKIEFLSSNISRELEisrinlcpssssitssklvTVSRICALPDIDDFFWDKEPTPILdlvenplrlksLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKiltgrrslihtlrkkdgisgytsRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTlsriqssksfrQLREVAKGMtkrigrgmHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEenrraedtqkseaiekqqegasdsnslpfgNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITsaglvgsdgpTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATvasiddrpvcfryprgaivrtdlpgyrgIPIEVVTRHASCTCLIITFEMLLCFLHVLV
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPssssitssklvtvsRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
*********LELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIV********SSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGIS************FNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN*********************************************KRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT*****************************FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVL*
******K*PLELPLTAHC***************I***LE*********************************FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQ*******************DCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSI**********SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE***********************NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
****SAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPS********LVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTL*KKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
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MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEVVTRHASCTCLIITFEMLLCFLHVLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query603 2.2.26 [Sep-21-2011]
Q38854 717 1-deoxy-D-xylulose-5-phos no no 0.872 0.733 0.576 1e-180
O78328 719 Probable 1-deoxy-D-xylulo N/A no 0.839 0.703 0.596 1e-176
O22567 720 1-deoxy-D-xylulose-5-phos no no 0.835 0.7 0.593 1e-175
Q6YU51 713 Probable 1-deoxy-D-xylulo no no 0.837 0.708 0.555 1e-166
Q89RW1 661 1-deoxy-D-xylulose-5-phos yes no 0.805 0.735 0.481 1e-135
B6IRB5 642 1-deoxy-D-xylulose-5-phos yes no 0.804 0.755 0.488 1e-135
A5VP09 643 1-deoxy-D-xylulose-5-phos yes no 0.802 0.752 0.498 1e-134
B3QFY7 641 1-deoxy-D-xylulose-5-phos yes no 0.825 0.776 0.477 1e-134
Q6NB76 641 1-deoxy-D-xylulose-5-phos yes no 0.825 0.776 0.477 1e-134
B0CKC0 643 1-deoxy-D-xylulose-5-phos yes no 0.802 0.752 0.496 1e-134
>sp|Q38854|DXS_ARATH 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2 Back     alignment and function desciption
 Score =  630 bits (1626), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/543 (57%), Positives = 402/543 (74%), Gaps = 17/543 (3%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 43  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 98

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 99  DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 158

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +
Sbjct: 159 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGD 218

Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
           G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LSR+QS+ 
Sbjct: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 278

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
           + R+LREVAKGMTK+IG  MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+
Sbjct: 279 ALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNID 338

Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
           DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     +       
Sbjct: 339 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 394

Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
            N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAV
Sbjct: 395 TNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 454

Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
           TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGA
Sbjct: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 514

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
           FD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+P
Sbjct: 515 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 574

Query: 576 IEV 578
           IE+
Sbjct: 575 IEI 577
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 7
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1 Back     alignment and function description
>sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2 Back     alignment and function description
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2 SV=1 Back     alignment and function description
>sp|Q89RW1|DXS_BRAJA 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum (strain USDA 110) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|B6IRB5|DXS_RHOCS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|A5VP09|DXS_BRUO2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|B3QFY7|DXS_RHOPT 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q6NB76|DXS_RHOPA 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|B0CKC0|DXS_BRUSI 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query603
255546609 717 1-deoxyxylulose-5-phosphate synthase, pu 0.951 0.800 0.761 0.0
224089136657 predicted protein [Populus trichocarpa] 0.849 0.779 0.802 0.0
449441938 717 PREDICTED: 1-deoxy-D-xylulose-5-phosphat 0.950 0.799 0.711 0.0
359476100 719 PREDICTED: probable 1-deoxy-D-xylulose-5 0.951 0.798 0.712 0.0
357466311 708 hypothetical protein MTR_3g107740 [Medic 0.933 0.795 0.700 0.0
356518258 716 PREDICTED: probable 1-deoxy-D-xylulose-5 0.936 0.789 0.699 0.0
356509936 716 PREDICTED: probable 1-deoxy-D-xylulose-5 0.935 0.787 0.698 0.0
408537469 712 1-deoxy-D-xylulose-5-phosphate synthase 0.935 0.792 0.690 0.0
224141855612 predicted protein [Populus trichocarpa] 0.767 0.756 0.796 0.0
15239030700 1-deoxy-D-xylulose 5-phosphate synthase 0.918 0.791 0.653 0.0
>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/578 (76%), Positives = 504/578 (87%), Gaps = 4/578 (0%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
           M T S +YP    +TAH        K++ LSS+   ++  S +NL   S+SIT+SK   V
Sbjct: 1   MGTASTQYPY--GITAHSFAKFGH-KLDTLSSSFPNKVGFSSVNLYQGSASITNSKGF-V 56

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            RIC++PD+DD FW+K PTPILD+VENP+ L +LT++ELK+LA EIR ELSSI+S+T+K+
Sbjct: 57  GRICSVPDLDDIFWEKVPTPILDVVENPIHLNNLTLQELKELADEIREELSSIMSRTQKA 116

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
            K+SLA VELTVA+HHVFHAPVDKILWDVGEQTYAHKILTGRRSL+HTLR+K+G+SG+TS
Sbjct: 117 FKASLAVVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTS 176

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           +SESEYDPF AGHGCNSVSAGLGMAVARD+KGKRE +VTVISNGTTMAGQ YEAMSNAGY
Sbjct: 177 QSESEYDPFGAGHGCNSVSAGLGMAVARDMKGKRERVVTVISNGTTMAGQVYEAMSNAGY 236

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           +DSNMIVILNDSRHSLHPKIEE PKTS+NALSSTLSR+QSSKSFR+ RE AKG+TKRIGR
Sbjct: 237 IDSNMIVILNDSRHSLHPKIEEGPKTSLNALSSTLSRLQSSKSFRKFREAAKGVTKRIGR 296

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GMHE AAKVDEYARGMIGP GSTLFEELGLYYIGPVDGHNIEDL+ VLQEVASL SMGPV
Sbjct: 297 GMHELAAKVDEYARGMIGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQEVASLDSMGPV 356

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           L+HVVTEENRR ++ QK + +E  QEG+S+S+   +  ++RTY DCF+EAL+MEAEKDKD
Sbjct: 357 LIHVVTEENRRRDNKQKIDTLENLQEGSSNSDPFLYSIHTRTYSDCFVEALIMEAEKDKD 416

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV+VHAGMEM+ + QL QE++P+R+FDVGMAEQHAVTFSAGL+CGGLKPFCIIPS FLQR
Sbjct: 417 IVIVHAGMEMETAFQLIQERYPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSTFLQR 476

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQVV+DVDQQR+PVRFVITSAGLVGSDGP QCGAFDITFMSCLPNMIVMAPSDEDELV
Sbjct: 477 AYDQVVHDVDQQRIPVRFVITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDELV 536

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEV 578
           DMVAT   IDD PVCFRYPRGAIV TD     GIPIE+
Sbjct: 537 DMVATAVQIDDHPVCFRYPRGAIVGTDHYMRIGIPIEI 574

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa] gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Cucumis sativus] gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Vitis vinifera] gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula] gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis] Back     alignment and taxonomy information
>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa] gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana] gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis thaliana] gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query603
TAIR|locus:2130374 717 CLA1 "CLOROPLASTOS ALTERADOS 1 0.850 0.715 0.589 5.9e-160
TAIR|locus:2089885641 DXPS1 "1-deoxy-D-xylulose 5-ph 0.437 0.411 0.591 2.4e-142
TAIR|locus:2148047 700 DXPS3 "1-deoxy-D-xylulose 5-ph 0.631 0.544 0.609 1.5e-115
TIGR_CMR|SPO_0247 642 SPO_0247 "1-deoxy-D-xylulose-5 0.796 0.747 0.491 8.4e-113
UNIPROTKB|P77488620 dxs "Dxs" [Escherichia coli K- 0.827 0.804 0.415 2.2e-96
TIGR_CMR|CHY_1985 622 CHY_1985 "1-deoxy-D-xylulose-5 0.796 0.771 0.404 2e-95
TIGR_CMR|DET_0745 647 DET_0745 "1-deoxy-D-xylulose-5 0.796 0.741 0.426 3.3e-95
TIGR_CMR|GSU_0686 637 GSU_0686 "deoxyxylulose-5-phos 0.776 0.734 0.422 6.8e-95
TIGR_CMR|GSU_1764 626 GSU_1764 "deoxyxylulose-5-phos 0.820 0.790 0.423 1e-93
TIGR_CMR|CPS_1088 630 CPS_1088 "1-deoxy-D-xylulose-5 0.771 0.738 0.414 2.7e-93
TAIR|locus:2130374 CLA1 "CLOROPLASTOS ALTERADOS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1558 (553.5 bits), Expect = 5.9e-160, P = 5.9e-160
 Identities = 310/526 (58%), Positives = 391/526 (74%)

Query:    62 RICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
             ++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+ E+RS++   VSKT   
Sbjct:    56 KVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGH 115

Query:   121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
             L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T 
Sbjct:   116 LGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTK 175

Query:   181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
             R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +G   AGQAYEAM+NAGY
Sbjct:   176 RGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGY 235

Query:   241 LDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
             LDS+MIVILND++  SL     + P   + ALSS LSR+QS+ + R+LREVAKGMTK+IG
Sbjct:   236 LDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIG 295

Query:   300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
               MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DL+++L+EV S  + GP
Sbjct:   296 GPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGP 355

Query:   360 VLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVM 413
             VL+HVVTE+ R      RA+D  K   + K              N +++Y   F EALV 
Sbjct:   356 VLIHVVTEKGRGYPYAERADD--KYHGVVKFDPATG--RQFKTTNKTQSYTTYFAEALVA 411

Query:   414 EAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII 473
             EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I
Sbjct:   412 EAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 471

Query:   474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAP 533
              S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNMIVMAP
Sbjct:   472 YSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAP 531

Query:   534 SDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEV 578
             SDE +L +MVAT  +IDDRP CFRYPRG  +   LP G +G+PIE+
Sbjct:   532 SDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEI 577
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=IEA;IDA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016114 "terpenoid biosynthetic process" evidence=IEA
GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA;TAS
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009965 "leaf morphogenesis" evidence=RCA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030154 "cell differentiation" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
TAIR|locus:2089885 DXPS1 "1-deoxy-D-xylulose 5-phosphate synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148047 DXPS3 "1-deoxy-D-xylulose 5-phosphate synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0247 SPO_0247 "1-deoxy-D-xylulose-5-phosphate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|P77488 dxs "Dxs" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1985 CHY_1985 "1-deoxy-D-xylulose-5-phosphate synthase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0745 DET_0745 "1-deoxy-D-xylulose-5-phosphate synthase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0686 GSU_0686 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1764 GSU_1764 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1088 CPS_1088 "1-deoxy-D-xylulose-5-phosphate synthase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.2.10.766
4th Layer2.2.1.70.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query603
PLN02225 701 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate 0.0
PLN02582 677 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK05444580 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate 0.0
COG1154 627 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [ 0.0
PLN02234641 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK12571 641 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate 0.0
TIGR00204 617 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn 1e-157
pfam13292272 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-ph 1e-126
PRK12315 581 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate 6e-99
cd02007195 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam 4e-76
cd07033156 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin 1e-60
pfam02779172 pfam02779, Transket_pyr, Transketolase, pyrimidine 1e-38
smart00861136 smart00861, Transket_pyr, Transketolase, pyrimidin 7e-38
COG3958 312 COG3958, COG3958, Transketolase, C-terminal subuni 1e-34
cd02007195 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam 2e-18
cd06586154 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding 6e-17
PRK05899 586 PRK05899, PRK05899, transketolase; Reviewed 3e-12
cd07036167 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PY 4e-08
PTZ00182 355 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydro 4e-06
COG0021 663 COG0021, TktA, Transketolase [Carbohydrate transpo 1e-05
PTZ00089661 PTZ00089, PTZ00089, transketolase; Provisional 9e-04
>gnl|CDD|177870 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information 
 Score =  740 bits (1912), Expect = 0.0
 Identities = 372/543 (68%), Positives = 437/543 (80%), Gaps = 21/543 (3%)

Query: 37  ELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTI 96
           ++ I  +   PSS+    S    V   C+LP+ D++  +K  TPILD +E PL+LK+L++
Sbjct: 36  DVSIKSLFSAPSSTHKECSNRARVC--CSLPNTDEYCDEKFETPILDSIETPLQLKNLSV 93

Query: 97  KELKQLAVEIRSELSSIV-SKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           KELK LA EIR+EL S++  KT+KS+  S AA+ELT+ALH+VF APVD ILWD  EQTYA
Sbjct: 94  KELKLLADEIRTELHSVLWKKTQKSMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYA 153

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HK+LT R S I + R+K+GISG TS+ ESEYD F  GHGCNS+SAGLG+AVARDIKGKR+
Sbjct: 154 HKVLTRRWSAIPS-RQKNGISGVTSQLESEYDSFGTGHGCNSISAGLGLAVARDIKGKRD 212

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            +V VI N T  AGQAYEAMSNAGYLDSNMIVILNDSRHSLHP +EE  K SI+ALSS +
Sbjct: 213 RVVAVIDNATITAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIM 272

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           S+IQSSK FR+ RE+AK MTKRIG+GM+EWAAKVDEYARGM+GP GSTLFEELGLYYIGP
Sbjct: 273 SKIQSSKIFRKFRELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGP 332

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLP 395
           VDGHNIEDL+ VL+EV+SL SMGPVLVHV+TEENR AE T K+  ++ +           
Sbjct: 333 VDGHNIEDLVCVLREVSSLDSMGPVLVHVITEENRDAE-TGKNIMVKDR----------- 380

Query: 396 FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHA 455
                RTY DCF+EALVMEAEKD+DIVVVHAGMEMD SL  FQE+FP+R+F+VGMAEQHA
Sbjct: 381 -----RTYSDCFVEALVMEAEKDRDIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHA 435

Query: 456 VTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCG 515
           VTFSAGL+ GGLKPFCIIPSAFLQRAYDQVV+DVD+QR  VRFVITSAGLVGSDGP QCG
Sbjct: 436 VTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCG 495

Query: 516 AFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIP 575
           AFDI FMS LPNMI MAP+DEDELV+MVAT A + DRPVCFR+PRG+IV  +     G+P
Sbjct: 496 AFDIAFMSSLPNMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLP 555

Query: 576 IEV 578
           IE+
Sbjct: 556 IEI 558

Length = 701
>gnl|CDD|178194 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>gnl|CDD|177878 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|222031 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|237053 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>gnl|CDD|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>gnl|CDD|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>gnl|CDD|132915 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|235639 PRK05899, PRK05899, transketolase; Reviewed Back     alignment and domain information
>gnl|CDD|132919 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>gnl|CDD|185502 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|173383 PTZ00089, PTZ00089, transketolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 603
COG1154 627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 100.0
PLN02225 701 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02234641 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02582 677 1-deoxy-D-xylulose-5-phosphate synthase 100.0
TIGR00204 617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 100.0
PRK12571 641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK12315 581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PTZ00089661 transketolase; Provisional 100.0
PRK12753663 transketolase; Reviewed 100.0
PLN02790654 transketolase 100.0
KOG0523 632 consensus Transketolase [Carbohydrate transport an 100.0
PRK05899624 transketolase; Reviewed 100.0
PRK12754663 transketolase; Reviewed 100.0
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 100.0
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 100.0
COG0021663 TktA Transketolase [Carbohydrate transport and met 100.0
TIGR03186 889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 100.0
PRK13012 896 2-oxoacid dehydrogenase subunit E1; Provisional 100.0
PRK09405 891 aceE pyruvate dehydrogenase subunit E1; Reviewed 100.0
TIGR00759 885 aceE pyruvate dehydrogenase E1 component, homodime 100.0
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 100.0
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 100.0
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 100.0
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 100.0
CHL00144 327 odpB pyruvate dehydrogenase E1 component beta subu 100.0
PRK05261 785 putative phosphoketolase; Provisional 100.0
PRK09212 327 pyruvate dehydrogenase subunit beta; Validated 100.0
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 100.0
PLN02683 356 pyruvate dehydrogenase E1 component subunit beta 100.0
PRK09404924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 100.0
PTZ00182 355 3-methyl-2-oxobutanate dehydrogenase; Provisional 100.0
PRK11892 464 pyruvate dehydrogenase subunit beta; Provisional 100.0
COG0022 324 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 100.0
COG2609 887 AceE Pyruvate dehydrogenase complex, dehydrogenase 100.0
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 100.0
TIGR00239929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 100.0
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 100.0
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 100.0
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 99.98
KOG0524 359 consensus Pyruvate dehydrogenase E1, beta subunit 99.98
KOG0525 362 consensus Branched chain alpha-keto acid dehydroge 99.95
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 99.91
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 99.89
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 99.89
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 99.88
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 99.87
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 99.86
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 99.86
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 99.86
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 99.78
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 99.78
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 99.74
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 99.65
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.64
COG3957 793 Phosphoketolase [Carbohydrate transport and metabo 99.62
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 99.57
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 99.56
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 99.51
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 99.5
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 99.5
PRK06163202 hypothetical protein; Provisional 99.49
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.48
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.47
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 99.46
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 99.46
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 99.44
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 99.44
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 99.44
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 99.42
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 99.4
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 99.4
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 99.39
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 99.39
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.38
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 99.37
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 99.35
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 99.34
PRK06112578 acetolactate synthase catalytic subunit; Validated 99.26
PRK08322547 acetolactate synthase; Reviewed 99.25
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 99.25
PRK06546578 pyruvate dehydrogenase; Provisional 99.24
PRK06154565 hypothetical protein; Provisional 99.24
PRK08199557 thiamine pyrophosphate protein; Validated 99.24
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 99.23
PRK08611576 pyruvate oxidase; Provisional 99.23
PRK09124574 pyruvate dehydrogenase; Provisional 99.23
PRK06457549 pyruvate dehydrogenase; Provisional 99.23
PRK08273597 thiamine pyrophosphate protein; Provisional 99.22
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 99.22
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 99.22
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 99.22
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 99.22
PRK05858542 hypothetical protein; Provisional 99.22
PRK08266542 hypothetical protein; Provisional 99.21
PRK07524535 hypothetical protein; Provisional 99.21
PRK07586514 hypothetical protein; Validated 99.21
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 99.21
PRK12474518 hypothetical protein; Provisional 99.2
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 99.2
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 99.19
PLN02470585 acetolactate synthase 99.19
PRK08155564 acetolactate synthase catalytic subunit; Validated 99.18
PRK07092530 benzoylformate decarboxylase; Reviewed 99.18
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 99.18
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 99.18
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 99.17
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 99.17
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 99.16
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 99.16
PRK07064544 hypothetical protein; Provisional 99.16
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 99.15
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 99.15
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 99.15
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 99.15
CHL00099585 ilvB acetohydroxyacid synthase large subunit 99.15
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 99.15
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 99.15
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 99.14
PRK11269591 glyoxylate carboligase; Provisional 99.14
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 99.13
PRK08617552 acetolactate synthase; Reviewed 99.13
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 99.13
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 99.13
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 99.12
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 99.12
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 99.08
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 99.07
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.05
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.04
PF09364379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 99.03
PLN02573578 pyruvate decarboxylase 99.02
PRK08327569 acetolactate synthase catalytic subunit; Validated 99.02
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.01
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 98.96
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 98.94
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 98.92
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 98.84
KOG0451 913 consensus Predicted 2-oxoglutarate dehydrogenase, 98.83
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 98.82
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 98.81
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 98.8
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 98.72
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 98.68
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 98.55
COG3962617 Acetolactate synthase [Amino acid transport and me 98.33
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 98.24
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 98.24
COG0567 906 SucA 2-oxoglutarate dehydrogenase complex, dehydro 98.19
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 98.18
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 98.16
KOG0450 1017 consensus 2-oxoglutarate dehydrogenase, E1 subunit 98.09
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 98.01
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 97.97
PF03894179 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate 97.63
cd03377365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 97.53
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 97.44
COG1165566 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car 97.2
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 97.05
TIGR03336 595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 96.9
COG3960592 Glyoxylate carboligase [General function predictio 96.84
PRK07119 352 2-ketoisovalerate ferredoxin reductase; Validated 96.83
TIGR021761165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 96.69
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 96.51
PRK08659 376 2-oxoglutarate ferredoxin oxidoreductase subunit a 96.36
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 96.18
PRK08366 390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 95.9
PRK09627 375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 95.73
PRK09622 407 porA pyruvate flavodoxin oxidoreductase subunit al 95.49
TIGR03710 562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 95.39
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 95.28
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 94.86
PRK08367 394 porA pyruvate ferredoxin oxidoreductase subunit al 94.24
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 93.94
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 93.87
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 93.6
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 92.5
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 92.26
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 91.85
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 91.23
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 91.11
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 91.09
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 91.03
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 90.57
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 90.56
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 90.53
PRK07092 530 benzoylformate decarboxylase; Reviewed 90.52
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 90.38
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 90.33
COG4231 640 Indolepyruvate ferredoxin oxidoreductase, alpha an 90.19
KOG0523 632 consensus Transketolase [Carbohydrate transport an 89.97
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 89.92
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 89.41
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 89.29
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 89.21
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 88.39
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 88.31
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 88.02
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 87.91
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 87.75
PRK08155 564 acetolactate synthase catalytic subunit; Validated 87.23
PRK08617 552 acetolactate synthase; Reviewed 87.16
PLN02470 585 acetolactate synthase 86.88
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 86.68
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 86.47
PRK08611 576 pyruvate oxidase; Provisional 86.15
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 86.06
COG0674 365 PorA Pyruvate:ferredoxin oxidoreductase and relate 85.95
PRK06163202 hypothetical protein; Provisional 85.71
PRK08199 557 thiamine pyrophosphate protein; Validated 85.7
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 85.68
PRK05858 542 hypothetical protein; Provisional 85.67
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 85.59
PRK06112 578 acetolactate synthase catalytic subunit; Validated 85.49
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 85.28
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 84.81
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 84.8
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 84.59
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 84.57
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 84.5
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 84.5
TIGR03457 579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 84.44
PRK06457 549 pyruvate dehydrogenase; Provisional 84.25
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 83.95
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 83.55
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 83.47
TIGR01504 588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 83.46
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 83.45
PRK07418 616 acetolactate synthase 3 catalytic subunit; Reviewe 83.27
cd01460266 vWA_midasin VWA_Midasin: Midasin is a member of th 83.27
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 83.13
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 83.12
PRK07524 535 hypothetical protein; Provisional 83.07
PRK06725 570 acetolactate synthase 3 catalytic subunit; Validat 82.83
PRK08322 547 acetolactate synthase; Reviewed 82.71
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 82.7
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 82.27
PRK07064 544 hypothetical protein; Provisional 82.15
PRK07586 514 hypothetical protein; Validated 81.68
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 81.59
COG4032172 Predicted thiamine-pyrophosphate-binding protein [ 81.58
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 81.35
PRK11269 591 glyoxylate carboligase; Provisional 81.07
TIGR02720 575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 80.8
PRK06048 561 acetolactate synthase 3 catalytic subunit; Reviewe 80.71
PRK07449 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 80.63
PRK08266 542 hypothetical protein; Provisional 80.43
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.2e-132  Score=1074.12  Aligned_cols=510  Identities=46%  Similarity=0.739  Sum_probs=477.7

Q ss_pred             CcCccCCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcCCCcccCccchHHHHHHHHhhccCCCceeeecCCchHHHHHH
Q 007443           79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKI  158 (603)
Q Consensus        79 ~~~l~~i~~p~~~k~l~~~~L~~la~~iR~~ii~~v~~~gGHlgsslg~~el~~aL~~vf~~p~D~ii~d~GH~aY~~~~  158 (603)
                      +|+|++|++|+|||+|+.+||++||+|||.++|+.|+++|||+||+||+||||+|||||||+|.|+||||+|||+|+||+
T Consensus         2 ~~~L~~i~~P~dLk~ls~~eL~~La~EiR~~li~~vS~~GGHlgsnLGvVELTiALH~VF~sP~D~~IwDVgHQaYpHKi   81 (627)
T COG1154           2 YPLLDKINSPADLKKLSIEELPQLADEIREFLLEVVSATGGHLGSNLGVVELTIALHYVFDSPKDKLIWDVGHQAYPHKI   81 (627)
T ss_pred             cchhhhcCCHHHHhhCCHHHHHHHHHHHHHHHHHHhccCCCccCCCcChhhhhHHHHHHhCCCCCCeEEecCcccchhHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcchhHhhHhhhcCCCCCCCCCCCCCCCCcCcCchhhhHHHHHHHHHHHHHcCCCCeEEEEEcCCccccchHHHHHHHh
Q 007443          159 LTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNA  238 (603)
Q Consensus       159 LtGr~~~~~~~R~~ggl~g~~~~~es~~d~~~~G~~G~~is~A~G~A~A~~l~g~~~~Vv~viGDGal~eG~~~EAln~A  238 (603)
                      ||||+++|.++||.+||+|||+|.||+||.|++||+||+||+|+|||.|++++|++++||||||||+++.||+|||||+|
T Consensus        82 LTGR~e~f~tlRq~~GlsGf~~r~ESe~D~f~~GHsSTSiSaalG~A~A~~~~g~~~~vvaVIGDGAlt~GmA~EALN~a  161 (627)
T COG1154          82 LTGRREQFDTLRQKDGLSGFPKREESEHDWFGVGHSSTSISAALGMAKARDLKGEDRNVVAVIGDGALTGGMAFEALNNA  161 (627)
T ss_pred             hcCchhhcchhhhcCCCCCCCCcccCCCcccccCchHHHHHHHhhHHHHHHhcCCCCcEEEEECCccccchHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-hcCCCEEEEEECCCCCcCCCccCCCcccchhhhhhhhhhhhhhhHHHHHHHHhhhhhccccchhHHHHhHHHhhhccC
Q 007443          239 G-YLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI  317 (603)
Q Consensus       239 ~-~~~~nlivIlndN~~si~~t~~~g~s~~vg~ls~~l~~~~~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  317 (603)
                      + ..+.|+|||+|||+|||        ++|+|+++++|+++++++.|+++|+..|++++..|.++.+.+.|+++.+|+++
T Consensus       162 g~~~~~~~iVILNDNeMSI--------s~nvGal~~~L~~l~~~~~y~~~~~~~kk~l~~~~~~~~~~~~r~e~~~K~l~  233 (627)
T COG1154         162 GADLKSNLIVILNDNEMSI--------SPNVGALSKHLARLRSGPFYQSLREGGKKVLSKVGPPLKRFAKRAEESIKGLL  233 (627)
T ss_pred             hhccCCCEEEEEeCCCccc--------CCCccHHHHHHHHHhccchHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhccc
Confidence            9 55699999999999999        78999999999999999999999999999998888889999999999999988


Q ss_pred             CCChhhHHhhcCCeEEeecCCCCHHHHHHHHHHHHhcCCCCcEEEEEEeecCCCCCcccCCc--hhhhc-ccCCCCCCCC
Q 007443          318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE--AIEKQ-QEGASDSNSL  394 (603)
Q Consensus       318 ~~~~~~lfea~G~~~ig~vDGhD~~~l~~al~~a~~~~~~gP~lI~v~T~kG~G~~~ae~~~--~~g~~-~~~~~~~~~~  394 (603)
                      .+  ..+||+|||+|+||+||||+++|+.+|+.+|+.  ++|++||+.|.|||||++||+++  |||-. +.. ......
T Consensus       234 ~~--~~lFeelGf~YiGPiDGHni~~Li~~Lk~~kd~--~gPvllHv~T~KGKGY~pAE~d~~~~H~v~~f~~-~~tg~~  308 (627)
T COG1154         234 VP--GTLFEELGFNYIGPIDGHNLEELIPTLKNAKDL--KGPVLLHVVTKKGKGYKPAEEDPIKYHGVGPFDP-IETGQS  308 (627)
T ss_pred             Cc--hhhHHHhCCeeECCcCCCCHHHHHHHHHHHhcC--CCCEEEEEEecCCCCCChhhcChhhccCCCCCCc-cccCcc
Confidence            87  589999999999999999999999999999998  89999999999999999999999  66531 110 000011


Q ss_pred             CC-CCCCccHHHHHHHHHHHHHhcCCCEEEEecCCCCCcchhhhhHhCCCCeeecchhhHHHHHHHHHHhcCCCeEEEEe
Q 007443          395 PF-GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII  473 (603)
Q Consensus       395 p~-~~~~~s~~~a~~~aL~~~~~~d~~vvvi~aDl~~~~~l~~f~~~fp~R~id~GIaE~~~vg~AaGlA~~G~~P~~~~  473 (603)
                      +. .+...||+++|++.|.+++++|+++|.++|+|..++|+..|.++||+||||+||||||+|++|+|||++|++|||.+
T Consensus       309 ~~~~~~~~sys~vf~~~L~~~a~~d~~ivaITaAM~~gtGL~~F~~~fP~R~fDVGIAEQHAVT~AAGlA~~G~kPvvaI  388 (627)
T COG1154         309 KKSKPSAPSYTKVFGDTLCELAAKDEKIVAITAAMPEGTGLVKFSKKFPDRFFDVGIAEQHAVTFAAGLAAEGMKPVVAI  388 (627)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEecCCCCCCChHHHHHhCchhheehhhhHHHHHHHHHHHHhCCCCCEEEE
Confidence            11 13567899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHhHHHHHHHHHHHhhcCCCCeEEEEeCCCCCCCCCCCCCChhhHHHHhcCCCcEEEecCCHHHHHHHHHHHHhCCCCc
Q 007443          474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP  553 (603)
Q Consensus       474 ~~~Fl~ra~dQi~~~~a~~~lpV~~~~~~~G~~g~dG~tH~~~~dia~lr~iPnl~V~~Psd~~e~~~~l~~a~~~~~~P  553 (603)
                      ||+|+||||||+.||+|+|++||+|+.+++|++|+||+|||+++|++|||+||||+|++|+|++|++.||++++..+++|
T Consensus       389 YSTFLQRAYDQliHDvaiqnLPV~faIDRAGivG~DG~TH~G~fDls~l~~iPnmvi~aP~de~el~~ml~ta~~~~~gP  468 (627)
T COG1154         389 YSTFLQRAYDQLIHDVAIQNLPVTFAIDRAGIVGADGPTHQGLFDLSFLRCIPNMVIMAPRDEEELRQMLYTALAQDDGP  468 (627)
T ss_pred             ecHHHHHHHHHHHHHHHhccCCeEEEEecCcccCCCCCccccHHHHHHHhcCCCcEEecCCCHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999888899


Q ss_pred             EEEEeecCCCccccCCCCCCccccccccc----CCcEEEEEecHHHHHHHHhh
Q 007443          554 VCFRYPRGAIVRTDLPGYRGIPIEVVTRH----ASCTCLIITFEMLLCFLHVL  602 (603)
Q Consensus       554 ~~ir~~r~~~~~~~~~~~~~~~~~~Gka~----G~dvtIIa~G~~v~~al~~~  602 (603)
                      +.||+||++........ ...++++||++    |.||.||++|.++..|+.|-
T Consensus       469 ~AiRyPrg~~~~~~~~~-~~~~~~~Gk~~i~~~G~~vail~~G~~~~~al~va  520 (627)
T COG1154         469 VAIRYPRGNGVGVILTP-ELEPLEIGKGELLKEGEKVAILAFGTMLPEALKVA  520 (627)
T ss_pred             eEEEecCCCCCCCCccc-ccccccccceEEEecCCcEEEEecchhhHHHHHHH
Confidence            99999999865432221 14678999997    99999999999999999873

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>COG4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query603
2o1s_A621 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From 1e-99
2o1x_A 629 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From 1e-84
3ooy_A 616 Crystal Structure Of Human Transketolase (Tkt) Leng 2e-07
3mos_A616 The Structure Of Human Transketolase Length = 616 2e-07
>pdb|2O1S|A Chain A, 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From Escherichia Coli Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  360 bits (924), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 207/511 (40%), Positives = 292/511 (57%), Gaps = 27/511 (5%)
Query: 74  WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
           +D    P L LV++   L+ L  + L +L  E+R  L   VS++     S L  VELTVA
Sbjct: 3   FDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVA 62
Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           LH+V++ P D+++WDVG Q Y HKILTGRR  I T+R+K G+  +  R ESEYD  + GH
Sbjct: 63  LHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGH 122
Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
              S+SAG+G+AVA + +GK    V VI +G   AG A+EA ++AG +  + +VILND+ 
Sbjct: 123 SSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGXAFEAXNHAGDIRPDXLVILNDN- 181
Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
                  E S   ++ AL++ L+++ S K +  LRE  K +   +   + E   + +E+ 
Sbjct: 182 -------EXSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGV-PPIKELLKRTEEHI 233
Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           +G + P   TLFEELG  YIGPVDGH++  LI+ L+    L   GP  +H+ T++ R  E
Sbjct: 234 KGXVVP--GTLFEELGFNYIGPVDGHDVLGLITTLKNXRDL--KGPQFLHIXTKKGRGYE 289
Query: 374 DTQKS----EAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
             +K      A+ K    +      S  LP  +YS+ + D   E     A KD  +  + 
Sbjct: 290 PAEKDPITFHAVPKFDPSSGCLPKSSGGLP--SYSKIFGDWLCET----AAKDNKLXAIT 343
Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
                      F  KFP+RYFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQV
Sbjct: 344 PAXREGSGXVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQV 403
Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           ++DV  Q+LPV F I  AG+VG+DG T  GAFD++++ C+P  ++  PSDE+E    + T
Sbjct: 404 LHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEXVIXTPSDENECRQXLYT 463
Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPI 576
               +D P   RYPRG  V  +L     +PI
Sbjct: 464 GYHYNDGPSAVRYPRGNAVGVELTPLEKLPI 494
>pdb|2O1X|A Chain A, 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From Deinococcus Radiodurans Length = 629 Back     alignment and structure
>pdb|3OOY|A Chain A, Crystal Structure Of Human Transketolase (Tkt) Length = 616 Back     alignment and structure
>pdb|3MOS|A Chain A, The Structure Of Human Transketolase Length = 616 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query603
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 0.0
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 0.0
3mos_A 616 Transketolase, TK; thiamin diphosphate TPP THDP en 9e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-07
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Length = 629 Back     alignment and structure
 Score =  676 bits (1746), Expect = 0.0
 Identities = 175/508 (34%), Positives = 268/508 (52%), Gaps = 23/508 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
               TP+LD +  P  LK L+ ++L  L  E+R E+  + S+    L SSL AV++  AL
Sbjct: 6   GTSDTPLLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITAL 65

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V  +P D+IL+DVG Q YAHKILTGRR  +  ++K+ GISG+T  SESE+D    GH 
Sbjct: 66  HYVLDSPRDRILFDVGHQAYAHKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHA 125

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S++  LGMA+ARD +GK   +  VI +G+   G A  A++  G +   M+++LND+  
Sbjct: 126 STSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLNDNEM 185

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++ A++  +  +Q  K F++     K   + + + + ++ ++     R
Sbjct: 186 SISE--------NVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTR 237

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
               P     F  +G+ Y+GPVDGHN+++L+ +L+ +  L   GP ++H+VT + +    
Sbjct: 238 HFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDLD--GPTILHIVTTKGKGLSY 295

Query: 372 AEDTQ-KSEAIEK--QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           AE          K     G    +S        ++   F EA+   A+ D    VV   M
Sbjct: 296 AEADPIYWHGPAKFDPATGEYVPSSAY------SWSAAFGEAVTEWAKTDPRTFVVTPAM 349

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F    P RY DVG+AE+ AVT +AG+A  G++P   I S FLQRAYDQV++D
Sbjct: 350 REGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIYSTFLQRAYDQVLHD 409

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  + L V F I  AG+VG+DG T  G FD++F+  +P + +  P D  EL  M+   A 
Sbjct: 410 VAIEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKY-AQ 468

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPI 576
             D P   RYPRG   +     +  +  
Sbjct: 469 THDGPFAIRYPRGNTAQVPAGTWPDLKW 496
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Length = 621 Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Length = 616 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query603
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 100.0
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 100.0
3l84_A632 Transketolase; TKT, structural genomics, center fo 100.0
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 100.0
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 100.0
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 100.0
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 100.0
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 100.0
3uk1_A711 Transketolase; structural genomics, seattle struct 100.0
1gpu_A 680 Transketolase; transferase(ketone residues); HET: 100.0
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 100.0
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 100.0
2qtc_A 886 Pyruvate dehydrogenase E1 component; thiamin dipho 100.0
1r9j_A 673 Transketolase; domains, EACH of the alpha/beta typ 100.0
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 100.0
2jgd_A 933 2-oxoglutarate dehydrogenase E1 component; flavopr 100.0
2yic_A868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 100.0
2xt6_A1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 100.0
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 100.0
2ozl_B 341 PDHE1-B, pyruvate dehydrogenase E1 component subun 100.0
1w85_B 324 Pyruvate dehydrogenase E1 component, beta subunit; 100.0
1umd_B 324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 100.0
2bfd_B 342 2-oxoisovalerate dehydrogenase beta subunit; oxido 100.0
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 100.0
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 99.97
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 99.94
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 99.93
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 99.92
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 99.9
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 99.55
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 99.51
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 99.48
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 99.47
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 99.44
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 99.43
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 99.4
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 99.4
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 99.39
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 99.39
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 99.35
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 99.34
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 99.34
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 99.3
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 99.29
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 99.26
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 99.24
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 99.22
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 99.21
1yd7_A 395 2-keto acid:ferredoxin oxidoreductase subunit alph 99.19
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 99.13
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 99.08
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 98.99
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.26
2c42_A1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.25
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 91.32
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 90.13
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 87.56
2nxw_A 565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 87.07
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 86.06
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 85.35
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 85.31
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 85.16
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 83.82
2vbi_A 566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 82.81
2wvg_A 568 PDC, pyruvate decarboxylase; thiamine diphosphate, 82.77
1q6z_A 528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 81.64
3hww_A 556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 80.5
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
Probab=100.00  E-value=4.8e-97  Score=841.51  Aligned_cols=512  Identities=33%  Similarity=0.550  Sum_probs=428.4

Q ss_pred             CCCCcCccCCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcCCCcccCccchHHHHHHHHhhccCCCceeeecCCchHHH
Q 007443           76 KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA  155 (603)
Q Consensus        76 ~~~~~~l~~i~~p~~~k~l~~~~L~~la~~iR~~ii~~v~~~gGHlgsslg~~el~~aL~~vf~~p~D~ii~d~GH~aY~  155 (603)
                      .+.||+|++|+.|.++|+++.++|+++|++||+.+++++++++||+++++|++|++.+||++|+.|+|+||||+|||+|+
T Consensus         7 ~~~~~~l~~i~~p~d~~~l~~~~l~~l~~~iR~~~~~~~~~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~~GH~~y~   86 (629)
T 2o1x_A            7 TSDTPLLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITALHYVLDSPRDRILFDVGHQAYA   86 (629)
T ss_dssp             CCSCTTGGGCSSHHHHTTSCGGGHHHHHHHHHHHHHHHHTTSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEESSSTTCHH
T ss_pred             CCCCchhhhCCChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCcCCCchhHHHHHHHHHhhcCCCCCeEEecCchHHHH
Confidence            35679999999999999999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             HHHHhcchhHhhHhhhcCCCCCCCCCCCCCCCCcCcCchhhhHHHHHHHHHHHHHcCCCCeEEEEEcCCccccchHHHHH
Q 007443          156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAM  235 (603)
Q Consensus       156 ~~~LtGr~~~~~~~R~~ggl~g~~~~~es~~d~~~~G~~G~~is~A~G~A~A~~l~g~~~~Vv~viGDGal~eG~~~EAl  235 (603)
                      |++++|+.+.+.++|+++|++|||++.+++++.+++||+|+++|+|+|+|+|+++++++++|||++|||++++|++||||
T Consensus        87 ~~~l~G~~~~~~~~r~~~g~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL  166 (629)
T 2o1x_A           87 HKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAAL  166 (629)
T ss_dssp             HHHTTTTGGGGGGTTSTTSCCSSCCGGGCTTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHH
T ss_pred             HHHHhCcHhHHhCcccCCCCCCCCCCCCCCCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCEEEEEECCCCCcCCCccCCCcccchhhhhhhhhhhhhhhHHHHHHHHhhhhhccccchhHHHHhHHHhhhc
Q 007443          236 SNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG  315 (603)
Q Consensus       236 n~A~~~~~nlivIlndN~~si~~t~~~g~s~~vg~ls~~l~~~~~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~  315 (603)
                      |+|+.++.|++||+|||++++        +++++.++.++++++..+.|..++.+.+++++.+|.++.+...++.+++|+
T Consensus       167 ~~A~~~~~pli~IvnnN~~~i--------~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~  238 (629)
T 2o1x_A          167 NTIGDMGRKMLIVLNDNEMSI--------SENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTRH  238 (629)
T ss_dssp             HHHHHHCCSEEEEEEECSBSS--------SBCCSSHHHHC----------------------------------------
T ss_pred             HHHHhhCCCEEEEEECCCCCC--------CCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHh
Confidence            999999999999999999998        567787777888888888888888877777665665554445555566666


Q ss_pred             cCCCChhhHHhhcCCeEEeecCCCCHHHHHHHHHHHHhcCCCCcEEEEEEeecCCCCCcccCCc--hhhhcccCCCCCCC
Q 007443          316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE--AIEKQQEGASDSNS  393 (603)
Q Consensus       316 ~~~~~~~~lfea~G~~~ig~vDGhD~~~l~~al~~a~~~~~~gP~lI~v~T~kG~G~~~ae~~~--~~g~~~~~~~~~~~  393 (603)
                      ++.|.+..+|++|||+++++|||||++++.++++++++.  ++|++||++|.||+||+++|+++  |||...-..+  +.
T Consensus       239 ~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~--~~P~lI~v~t~kg~G~~~~e~~~~~~H~~~~f~~~--~~  314 (629)
T 2o1x_A          239 FFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDL--DGPTILHIVTTKGKGLSYAEADPIYWHGPAKFDPA--TG  314 (629)
T ss_dssp             -----CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTTS--SSEEEEEEECCTTTTCHHHHHCTTGGGSCCSBCTT--TC
T ss_pred             hcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHhc--CCCEEEEEEEecCCCCChhHcCCcccccCccCCcC--cC
Confidence            555533389999999999999999999999999999876  89999999999999999998776  7875321111  01


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHhcCCCEEEEecCCCCCcchhhhhHhCCCCeeecchhhHHHHHHHHHHhcCCCeEEEEe
Q 007443          394 LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII  473 (603)
Q Consensus       394 ~p~~~~~~s~~~a~~~aL~~~~~~d~~vvvi~aDl~~~~~l~~f~~~fp~R~id~GIaE~~~vg~AaGlA~~G~~P~~~~  473 (603)
                      .+...+..+|+++|+++|.+++++|++|+++++|+.+++++.+|+++||+||||+||+|++|+++|+|+|+.|++||+++
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~~~~~f~~~~~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~  394 (629)
T 2o1x_A          315 EYVPSSAYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAI  394 (629)
T ss_dssp             CBCCCCCCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCHHHHHHCGGGEEECCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccccchHHHHHHHHHHHHHHhhhCcCEEEEeccccCCcChHHHHHhcCcceEeccccHHHHHHHHHHHHHcCCEEEEEe
Confidence            10011257999999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             cHHhHHHHHHHHHHHhhcCCCCeEEEEeCCCCCCCCCCCCCChhhHHHHhcCCCcEEEecCCHHHHHHHHHHHHhCCCCc
Q 007443          474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP  553 (603)
Q Consensus       474 ~~~Fl~ra~dQi~~~~a~~~lpV~~~~~~~G~~g~dG~tH~~~~dia~lr~iPnl~V~~Psd~~e~~~~l~~a~~~~~~P  553 (603)
                      |++|++|++|||++++|++++||+++++++|++|+||+|||+.+|+++||++|||+|++|+|++|++.++++|+.. ++|
T Consensus       395 ~~~F~~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a~~~-~~P  473 (629)
T 2o1x_A          395 YSTFLQRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTH-DGP  473 (629)
T ss_dssp             EHHHHGGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHHHHS-SSC
T ss_pred             cHHHHHHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHHHhC-CCC
Confidence            9999999999999999999999999999999988899999999999999999999999999999999999999764 899


Q ss_pred             EEEEeecCCCccccCCCCCCccccccccc----CCcEEEEEecHHHHHHHHhh
Q 007443          554 VCFRYPRGAIVRTDLPGYRGIPIEVVTRH----ASCTCLIITFEMLLCFLHVL  602 (603)
Q Consensus       554 ~~ir~~r~~~~~~~~~~~~~~~~~~Gka~----G~dvtIIa~G~~v~~al~~~  602 (603)
                      ++||++|+.++..++  ...+.+++||++    |.|+||||+|.+++.|+++.
T Consensus       474 v~i~~~r~~~~~~~~--~~~~~~~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa  524 (629)
T 2o1x_A          474 FAIRYPRGNTAQVPA--GTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAA  524 (629)
T ss_dssp             EEEECCSSBCCCCCT--TCCCCCCTTCCEEEECCSSEEEEECHHHHHHHHHHH
T ss_pred             EEEEecCCCCCCCcc--cccccccCCceEEEeeCCCEEEEEecHHHHHHHHHH
Confidence            999999987643222  224668899975    89999999999999999975
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 603
d1itza2192 c.36.1.6 (A:348-539) Transketolase (TK), Pyr modul 4e-24
d1gpua2197 c.36.1.6 (A:338-534) Transketolase (TK), Pyr modul 2e-23
d1r9ja1190 c.36.1.6 (A:337-526) Transketolase (TK), Pyr modul 1e-22
d2r8oa1195 c.36.1.6 (A:333-527) Transketolase (TK), Pyr modul 4e-21
d1umdb1186 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid 2e-20
d2ieaa2415 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 com 2e-12
d1ik6a1191 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate deh 4e-12
d2ozlb1192 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate deh 1e-10
d2bfdb1203 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid 2e-10
d1qs0b1204 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase 2e-10
d1gpua1335 c.36.1.10 (A:3-337) Transketolase (TK), PP module 2e-09
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Length = 192 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like Pyr module
domain: Transketolase (TK), Pyr module
species: Maize (Zea mays) [TaxId: 4577]

 Score = 98.0 bits (243), Expect = 4e-24
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 8/167 (4%)

Query: 405 DCFIEALVMEAEKDKDIVVVHA------GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTF 458
           +   + L   A     ++   A         + +     ++   ER    G+ E      
Sbjct: 23  NLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTAEERNVRFGVREHGMGAI 82

Query: 459 SAGLA--CGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
             G+A    G  P+C     F       +      +   +  +   +  +G DGPT    
Sbjct: 83  CNGIALHSPGFVPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPI 142

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
             +     +PN++++ P+D +E             RP      R  +
Sbjct: 143 EHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKL 189
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 197 Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Length = 190 Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Length = 195 Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Length = 186 Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Length = 415 Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 191 Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Length = 204 Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 335 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query603
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 100.0
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 100.0
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 100.0
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 100.0
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 100.0
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 100.0
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 100.0
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 100.0
d2ieaa2415 Pyruvate dehydrogenase E1 component, PP module {Es 100.0
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 100.0
d1umdb1186 Branched-chain alpha-keto acid dehydrogenase, Pyr 100.0
d1w85b1192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d 100.0
d2ozlb1192 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 100.0
d1ik6a1191 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 100.0
d2bfdb1203 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.98
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 99.92
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 99.91
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 99.91
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 99.91
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 99.89
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 99.57
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 99.52
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 99.51
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 99.5
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.5
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 99.49
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.49
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.48
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.42
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.42
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.38
d2ieaa1230 Pyruvate dehydrogenase E1 component, Pyr module {E 99.36
d2c42a2447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 98.15
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 96.18
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 95.52
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 95.11
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 94.18
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 94.05
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 93.8
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 93.47
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 92.69
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 92.22
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 91.69
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 89.45
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 88.24
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 87.79
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 87.76
d1ovma2178 Indole-3-pyruvate decarboxylase {Enterobacter cloa 85.59
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 84.8
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 84.74
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 83.28
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 82.79
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like PP module
domain: Transketolase (TK), PP module
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.4e-44  Score=372.24  Aligned_cols=233  Identities=19%  Similarity=0.241  Sum_probs=201.9

Q ss_pred             HHHHHHHHHHHHHHHHh-cCCCcccCccchHHHHHHHHhhc-c--------CCCceeeecCCchH---HHHHHHhcc---
Q 007443           99 LKQLAVEIRSELSSIVS-KTEKSLKSSLAAVELTVALHHVF-H--------APVDKILWDVGEQT---YAHKILTGR---  162 (603)
Q Consensus        99 L~~la~~iR~~ii~~v~-~~gGHlgsslg~~el~~aL~~vf-~--------~p~D~ii~d~GH~a---Y~~~~LtGr---  162 (603)
                      ++++|++||..+++||. +++||+|++||++|++++||+.| +        .+||+||+|+||++   |+.+.++|+   
T Consensus         3 ~~~~a~~iR~~~~d~v~~a~sGH~G~~ls~~~i~~~Ly~~~l~~~~~~p~~~~rDrfilSkGH~~~~~Ya~l~~~G~~~~   82 (331)
T d2r8oa2           3 RKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLP   82 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHhccCcCCCCCCCCCeEEEeccchHHHHHHHHHHhCCCCC
Confidence            68899999999999998 68899999999999999999843 2        23899999999999   888999995   


Q ss_pred             hhHhhHhhhcCC-CCCCCCCCCCCCCCcCcCchhhhHHHHHHHHHHHHHcC----------CCCeEEEEEcCCccccchH
Q 007443          163 RSLIHTLRKKDG-ISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG----------KRECIVTVISNGTTMAGQA  231 (603)
Q Consensus       163 ~~~~~~~R~~gg-l~g~~~~~es~~d~~~~G~~G~~is~A~G~A~A~~l~g----------~~~~Vv~viGDGal~eG~~  231 (603)
                      .+.+.+||+.|+ ++|||+....++..+++|++|+|++.|+|||+|.|+++          .+++|||++|||+++||++
T Consensus        83 ~e~l~~f~~~gs~~~ghp~~~~~~gve~stGsLG~Gl~~avG~Ala~k~~~~~~~~~~~~~~~~~v~~l~GDGel~EG~~  162 (331)
T d2r8oa2          83 MEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGIS  162 (331)
T ss_dssp             HHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHH
T ss_pred             HHHHHhcCCCCCCCCCCCCcCcCCCcccCcCchhhhhHHHHHHHHHHHHHhhhhccccccccCceEEEecccccccccch
Confidence            588999999864 78999987788999999999999999999999988754          3688999999999999999


Q ss_pred             HHHHHHhhhcC-CCEEEEEECCCCCcCCCccCCCcccchhhhhhhhhhhhhhhHHHHHHHHhhhhhccccchhHHHHhHH
Q 007443          232 YEAMSNAGYLD-SNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD  310 (603)
Q Consensus       232 ~EAln~A~~~~-~nlivIlndN~~si~~t~~~g~s~~vg~ls~~l~~~~~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~~  310 (603)
                      |||+++|++++ +||++|+|+|+++++     |.+..+                                          
T Consensus       163 wEA~~~A~~~kL~nLi~i~D~N~~~~~-----g~~~~~------------------------------------------  195 (331)
T d2r8oa2         163 HEVCSLAGTLKLGKLIAFYDDNGISID-----GHVEGW------------------------------------------  195 (331)
T ss_dssp             HHHHHHHHHTTCTTEEEEEEECSEETT-----EEGGGT------------------------------------------
T ss_pred             hHhhhhcchhcccceeeHHhhhhhccc-----cccccc------------------------------------------
Confidence            99999999999 999999999999873     211110                                          


Q ss_pred             HhhhccCCCChhhHHhhcCCeEEeecCCCCHHHHHHHHHHHHhcCCCCcEEEEEEeecCCCCCcccCCc-hhhhcc
Q 007443          311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE-AIEKQQ  385 (603)
Q Consensus       311 ~~~~~~~~~~~~~lfea~G~~~ig~vDGhD~~~l~~al~~a~~~~~~gP~lI~v~T~kG~G~~~ae~~~-~~g~~~  385 (603)
                            +..+...+|++|||+++..+||||++++.++++++++. .++|++|+++|+||+|.+.+|+.+ +||..+
T Consensus       196 ------~~~~~~~rf~afGw~vi~~~dghd~~~i~~A~~~a~~~-~~kP~~Ii~~TikGkG~~~~e~~~~~Hg~~l  264 (331)
T d2r8oa2         196 ------FTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAV-TDKPSLLMCKTIIGFGSPNKAGTHDSHGAPL  264 (331)
T ss_dssp             ------CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC-CSSCEEEEEECCTTTTCTTTTTSGGGTSSCC
T ss_pred             ------cchhHHHHHHHcCCeeecccccchHHHHHHHHHHHHhh-cCCCccceeeeeeecCCcccCCCchhhcCCC
Confidence                  01122567999999998779999999999999999875 378999999999999999999888 887655
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2ieaa1 c.36.1.6 (A:471-700) Pyruvate dehydrogenase E1 component, Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure