Citrus Sinensis ID: 007503
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 601 | 2.2.26 [Sep-21-2011] | |||||||
| O04630 | 709 | Threonine--tRNA ligase, m | yes | no | 0.474 | 0.401 | 0.785 | 1e-132 | |
| Q8GZ45 | 458 | Probable threonine--tRNA | no | no | 0.475 | 0.624 | 0.656 | 1e-107 | |
| Q54J66 | 710 | Probable threonine--tRNA | yes | no | 0.485 | 0.411 | 0.590 | 1e-101 | |
| P04801 | 734 | Threonine--tRNA ligase, c | yes | no | 0.479 | 0.392 | 0.574 | 1e-99 | |
| Q9D0R2 | 722 | Threonine--tRNA ligase, c | yes | no | 0.472 | 0.393 | 0.592 | 8e-99 | |
| P26639 | 723 | Threonine--tRNA ligase, c | yes | no | 0.472 | 0.392 | 0.592 | 1e-98 | |
| Q5XHY5 | 695 | Threonine--tRNA ligase, c | yes | no | 0.472 | 0.408 | 0.592 | 1e-98 | |
| Q3ZBV8 | 723 | Threonine--tRNA ligase, c | yes | no | 0.472 | 0.392 | 0.589 | 3e-98 | |
| P52709 | 725 | Threonine--tRNA ligase, c | yes | no | 0.474 | 0.393 | 0.583 | 2e-97 | |
| Q8BLY2 | 790 | Probable threonine--tRNA | no | no | 0.470 | 0.358 | 0.588 | 8e-97 |
| >sp|O04630|SYTM_ARATH Threonine--tRNA ligase, mitochondrial OS=Arabidopsis thaliana GN=THRRS PE=2 SV=3 | Back alignment and function desciption |
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Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/289 (78%), Positives = 250/289 (86%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFGVLHRNEASGAL+GLTRVRRFQQDDAHIFC Q+K EV+GVLEFIDY
Sbjct: 420 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y++FGFTYELKLSTRPEKYLGDL TW+KAEA L EA+ FGKP +NEGDGAFYGPKID
Sbjct: 480 VYKVFGFTYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKID 539
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I+VSDA+ RKFQCATLQLDFQLP RFNL Y+AEDEAK RPVMIHRA+LGSVERMFAILL
Sbjct: 540 ITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILL 599
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQ 551
EHYKGKWPFW+SPRQAIVCP+SEKSQ YA +V+ I AG+YVD D TDRKI KKVREAQ
Sbjct: 600 EHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQ 659
Query: 552 LAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 600
LAQYN+ILVVGE EA +GQVSVRVRD HS SIEDLL+ FK K F
Sbjct: 660 LAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAKTAEF 708
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Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 3 |
| >sp|Q8GZ45|SYTC_ARATH Probable threonine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At1g17960 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium discoideum GN=thrS1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P04801|SYTC_YEAST Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THS1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1 SV=2 | Back alignment and function description |
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| >sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3 | Back alignment and function description |
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| >sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars PE=2 SV=1 | Back alignment and function description |
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| >sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1 | Back alignment and function description |
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| >sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=trs-1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus GN=Tarsl2 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 601 | ||||||
| 348535718 | 629 | PREDICTED: threonyl-tRNA synthetase, cyt | 0.891 | 0.852 | 0.519 | 1e-167 | |
| 54400362 | 624 | threonyl-tRNA synthetase, cytoplasmic is | 0.891 | 0.858 | 0.516 | 1e-165 | |
| 449527921 | 305 | PREDICTED: threonine--tRNA ligase, mitoc | 0.482 | 0.950 | 0.889 | 1e-149 | |
| 449449092 | 724 | PREDICTED: threonine--tRNA ligase, mitoc | 0.450 | 0.374 | 0.889 | 1e-148 | |
| 225461914 | 745 | PREDICTED: threonyl-tRNA synthetase, mit | 0.479 | 0.386 | 0.886 | 1e-148 | |
| 296089916 | 686 | unnamed protein product [Vitis vinifera] | 0.479 | 0.419 | 0.886 | 1e-148 | |
| 225424719 | 686 | PREDICTED: threonyl-tRNA synthetase, mit | 0.479 | 0.419 | 0.882 | 1e-148 | |
| 357485977 | 711 | Threonyl-tRNA synthetase [Medicago trunc | 0.490 | 0.414 | 0.837 | 1e-146 | |
| 356497888 | 717 | PREDICTED: threonyl-tRNA synthetase, mit | 0.490 | 0.411 | 0.844 | 1e-144 | |
| 356501560 | 710 | PREDICTED: threonyl-tRNA synthetase, mit | 0.490 | 0.415 | 0.841 | 1e-144 |
| >gi|348535718|ref|XP_003455346.1| PREDICTED: threonyl-tRNA synthetase, cytoplasmic-like isoform 2 [Oreochromis niloticus] | Back alignment and taxonomy information |
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Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/566 (51%), Positives = 376/566 (66%), Gaps = 30/566 (5%)
Query: 58 IPKRISLFQSLQSEQQARLQ---SLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSL 114
I +R++L+ L++E A + + PIK+TLPDG V E + W+T+P +A GIS+ L
Sbjct: 53 IEERLTLYTKLKAEHDALMAERAAKDSKPIKVTLPDGKVVEAESWKTTPYKVACGISQGL 112
Query: 115 AANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKL 174
A N +I+ VN +WD+ RPLE DC L+L FD +E + +WHSSAHI+G+A+E+ YG L
Sbjct: 113 ADNTVIAKVNNSVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCL 172
Query: 175 CIGPCTTRGEGFYYDAFY-GDLGLNPDHFKSIDSEADK--AAKQPFERIEVTRDQALEMF 231
C GP G FYYD F + G++ + F ++S K KQPFER+E+ ++ LEMF
Sbjct: 173 CYGPPIENG--FYYDMFLENNEGVSSNDFPCLESLCKKIIKEKQPFERLEIKKETLLEMF 230
Query: 232 SDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKD 291
N FK I+N+ T TVYRCGPL+DLCRGPH+ +T +K K SS YW G D
Sbjct: 231 KYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKAD 290
Query: 292 RESLQRVYGISYPDKKRLKHAFA---------------------ELPLRLADFGVLHRNE 330
E+LQR+YGIS+PD K LK FA ELPLR+ADFGVLHRNE
Sbjct: 291 METLQRIYGISFPDPKMLKEIFALKPMNCPGHCLMFDHRPRSWRELPLRMADFGVLHRNE 350
Query: 331 ASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEK 390
SGALTGLTRVRRFQQDDAHIFC QI+ E++G L+F+ Y +FGFT++L LSTRPEK
Sbjct: 351 LSGALTGLTRVRRFQQDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPEK 410
Query: 391 YLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLD 450
+LGD W++AE L +LNEFG+ W +N GDGAFYGPKIDI + DA+ R QCAT+QLD
Sbjct: 411 FLGDPEVWDQAEKQLENSLNEFGEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLD 470
Query: 451 FQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVC 510
FQLP RFNL + + D +RPV+IHRAILGSVERM AIL E+Y GKWP WLSPRQ +V
Sbjct: 471 FQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVV 530
Query: 511 PVSEKSQPYALQVRDHIYRAGYYVDVDTTDR-KIQKKVREAQLAQYNFILVVGEEEAKSG 569
PV + YA +V+ + +G DVD + KK+R AQLAQYNFILVVGE+E S
Sbjct: 531 PVGPTCEEYAEKVKQEFHSSGLMTDVDLDPSCTLNKKIRNAQLAQYNFILVVGEKEKTSN 590
Query: 570 QVSVRVRDQGDHSNMSIEDLLKHFKE 595
V+VR RD H S+E+ +K K+
Sbjct: 591 TVNVRTRDNKVHGEHSVEECIKRLKQ 616
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Source: Oreochromis niloticus Species: Oreochromis niloticus Genus: Oreochromis Family: Cichlidae Order: Perciformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|54400362|ref|NP_001005932.1| threonyl-tRNA synthetase, cytoplasmic isoform 2 [Danio rerio] gi|53734186|gb|AAH83525.1| Zgc:92586 [Danio rerio] | Back alignment and taxonomy information |
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| >gi|449527921|ref|XP_004170956.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449449092|ref|XP_004142299.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225461914|ref|XP_002265484.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296089916|emb|CBI39735.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225424719|ref|XP_002265302.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial [Vitis vinifera] gi|296086530|emb|CBI32119.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357485977|ref|XP_003613276.1| Threonyl-tRNA synthetase [Medicago truncatula] gi|355514611|gb|AES96234.1| Threonyl-tRNA synthetase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356497888|ref|XP_003517788.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356501560|ref|XP_003519592.1| PREDICTED: threonyl-tRNA synthetase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 601 | ||||||
| TAIR|locus:2148538 | 709 | AT5G26830 [Arabidopsis thalian | 0.480 | 0.407 | 0.785 | 6.2e-238 | |
| TAIR|locus:2030918 | 458 | AT1G17960 [Arabidopsis thalian | 0.475 | 0.624 | 0.659 | 1.2e-162 | |
| WB|WBGene00006617 | 725 | tars-1 [Caenorhabditis elegans | 0.474 | 0.393 | 0.579 | 2.3e-159 | |
| FB|FBgn0027081 | 747 | Aats-thr "Threonyl-tRNA synthe | 0.477 | 0.384 | 0.618 | 1.5e-155 | |
| UNIPROTKB|F1P372 | 673 | TARSL2 "Uncharacterized protei | 0.472 | 0.421 | 0.589 | 4.9e-155 | |
| ZFIN|ZDB-GENE-041010-218 | 718 | tars "threonyl-tRNA synthetase | 0.472 | 0.395 | 0.585 | 1.2e-153 | |
| MGI|MGI:106314 | 722 | Tars "threonyl-tRNA synthetase | 0.472 | 0.393 | 0.592 | 1.9e-153 | |
| UNIPROTKB|P26639 | 723 | TARS "Threonine--tRNA ligase, | 0.480 | 0.399 | 0.587 | 2.4e-153 | |
| RGD|1359527 | 695 | Tars "threonyl-tRNA synthetase | 0.472 | 0.408 | 0.592 | 2.4e-153 | |
| UNIPROTKB|Q5XHY5 | 695 | Tars "Threonine--tRNA ligase, | 0.472 | 0.408 | 0.592 | 2.4e-153 |
| TAIR|locus:2148538 AT5G26830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1191 (424.3 bits), Expect = 6.2e-238, Sum P(2) = 6.2e-238
Identities = 227/289 (78%), Positives = 250/289 (86%)
Query: 312 AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDY 371
++ ELP+RLADFGVLHRNEASGAL+GLTRVRRFQQDDAHIFC Q+K EV+GVLEFIDY
Sbjct: 420 SYRELPMRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDY 479
Query: 372 AYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKID 431
Y++FGFTYELKLSTRPEKYLGDL TW+KAEA L EA+ FGKP +NEGDGAFYGPKID
Sbjct: 480 VYKVFGFTYELKLSTRPEKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKID 539
Query: 432 ISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILL 491
I+VSDA+ RKFQCATLQLDFQLP RFNL Y+AEDEAK RPVMIHRA+LGSVERMFAILL
Sbjct: 540 ITVSDAMNRKFQCATLQLDFQLPIRFNLEYAAEDEAKKSRPVMIHRAVLGSVERMFAILL 599
Query: 492 EHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQ 551
EHYKGKWPFW+SPRQAIVCP+SEKSQ YA +V+ I AG+YVD D TDRKI KKVREAQ
Sbjct: 600 EHYKGKWPFWISPRQAIVCPISEKSQQYAEKVQKQIKDAGFYVDADLTDRKIDKKVREAQ 659
Query: 552 LAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 600
LAQYN+ILVVGE EA +GQVSVRVRD HS SIEDLL+ FK K F
Sbjct: 660 LAQYNYILVVGETEAATGQVSVRVRDNAAHSVKSIEDLLEEFKAKTAEF 708
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| TAIR|locus:2030918 AT1G17960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| WB|WBGene00006617 tars-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| FB|FBgn0027081 Aats-thr "Threonyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P372 TARSL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-041010-218 tars "threonyl-tRNA synthetase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:106314 Tars "threonyl-tRNA synthetase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P26639 TARS "Threonine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1359527 Tars "threonyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5XHY5 Tars "Threonine--tRNA ligase, cytoplasmic" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O04630 | SYTM_ARATH | 6, ., 1, ., 1, ., 3 | 0.7854 | 0.4742 | 0.4019 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.1.1.3 | 0.991 |
| 3rd Layer | 6.1.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00028863001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (601 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | rpl20 | • | • | 0.912 | |||||||
 | GSVIVG00017183001 | • | • | • | 0.909 | ||||||
 | GSVIVG00001918001 | • | • | 0.884 | |||||||
 | GSVIVG00022843001 | • | • | 0.845 | |||||||
 | GSVIVG00002216001 | • | • | • | 0.812 | ||||||
 | GSVIVG00032094001 | • | • | 0.810 | |||||||
 | GSVIVG00001677001 | • | • | • | 0.806 | ||||||
 | GSVIVG00032071001 | • | • | • | 0.799 | ||||||
 | GSVIVG00023243001 | • | 0.787 | ||||||||
 | GSVIVG00006883001 | • | 0.779 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 601 | |||
| PLN02908 | 686 | PLN02908, PLN02908, threonyl-tRNA synthetase | 0.0 | |
| PLN02908 | 686 | PLN02908, PLN02908, threonyl-tRNA synthetase | 1e-171 | |
| PRK00413 | 638 | PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | 1e-148 | |
| PRK12305 | 575 | PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | 1e-139 | |
| COG0441 | 589 | COG0441, ThrS, Threonyl-tRNA synthetase [Translati | 1e-125 | |
| TIGR00418 | 563 | TIGR00418, thrS, threonyl-tRNA synthetase | 1e-124 | |
| cd00771 | 298 | cd00771, ThrRS_core, Threonyl-tRNA synthetase (Thr | 1e-117 | |
| PRK12444 | 639 | PRK12444, PRK12444, threonyl-tRNA synthetase; Revi | 1e-112 | |
| PLN02837 | 614 | PLN02837, PLN02837, threonine-tRNA ligase | 4e-89 | |
| PRK00413 | 638 | PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | 2e-86 | |
| PRK14799 | 545 | PRK14799, thrS, threonyl-tRNA synthetase; Provisio | 4e-80 | |
| PRK12444 | 639 | PRK12444, PRK12444, threonyl-tRNA synthetase; Revi | 3e-59 | |
| PRK12305 | 575 | PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | 3e-51 | |
| PRK03991 | 613 | PRK03991, PRK03991, threonyl-tRNA synthetase; Vali | 6e-44 | |
| COG0441 | 589 | COG0441, ThrS, Threonyl-tRNA synthetase [Translati | 2e-43 | |
| TIGR00418 | 563 | TIGR00418, thrS, threonyl-tRNA synthetase | 2e-33 | |
| cd00860 | 91 | cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon | 3e-33 | |
| cd01667 | 61 | cd01667, TGS_ThrRS_N, TGS _ThrRS_N: ThrRS (threony | 2e-25 | |
| pfam03129 | 93 | pfam03129, HGTP_anticodon, Anticodon binding domai | 1e-21 | |
| pfam00587 | 171 | pfam00587, tRNA-synt_2b, tRNA synthetase class II | 5e-21 | |
| pfam02824 | 60 | pfam02824, TGS, TGS domain | 2e-16 | |
| PLN02837 | 614 | PLN02837, PLN02837, threonine-tRNA ligase | 1e-15 | |
| cd00670 | 235 | cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro | 5e-13 | |
| COG0124 | 429 | COG0124, HisS, Histidyl-tRNA synthetase [Translati | 7e-11 | |
| PRK14938 | 387 | PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provi | 1e-10 | |
| smart00863 | 43 | smart00863, tRNA_SAD, Threonyl and Alanyl tRNA syn | 1e-10 | |
| pfam07973 | 44 | pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synt | 7e-10 | |
| PRK00037 | 412 | PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | 1e-09 | |
| cd00768 | 211 | cd00768, class_II_aaRS-like_core, Class II tRNA am | 1e-09 | |
| TIGR00442 | 397 | TIGR00442, hisS, histidyl-tRNA synthetase | 1e-09 | |
| cd00738 | 94 | cd00738, HGTP_anticodon, HGTP anticodon binding do | 3e-08 | |
| cd00859 | 91 | cd00859, HisRS_anticodon, HisRS Histidyl-anticodon | 1e-06 | |
| PRK09194 | 565 | PRK09194, PRK09194, prolyl-tRNA synthetase; Provis | 2e-04 | |
| cd00861 | 94 | cd00861, ProRS_anticodon_short, ProRS Prolyl-antic | 3e-04 | |
| TIGR00408 | 472 | TIGR00408, proS_fam_I, prolyl-tRNA synthetase, fam | 7e-04 | |
| PRK08661 | 477 | PRK08661, PRK08661, prolyl-tRNA synthetase; Provis | 0.003 | |
| TIGR00389 | 551 | TIGR00389, glyS_dimeric, glycyl-tRNA synthetase, d | 0.003 |
| >gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 585 bits (1509), Expect = 0.0
Identities = 235/298 (78%), Positives = 257/298 (86%), Gaps = 3/298 (1%)
Query: 303 YPDKKRLKHAFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEV 362
+ + R ++ ELPLRLADFGVLHRNE SGALTGLTRVRRFQQDDAHIFCRE QIKDEV
Sbjct: 391 FAHRVR---SYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEV 447
Query: 363 RGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGD 422
+GVL+F+DY Y +FGFTYELKLSTRPEKYLGDL TW+KAEAALTEALN FGKPWQ+NEGD
Sbjct: 448 KGVLDFLDYVYEVFGFTYELKLSTRPEKYLGDLETWDKAEAALTEALNAFGKPWQLNEGD 507
Query: 423 GAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGS 482
GAFYGPKIDI+VSDALKRKFQCAT+QLDFQLP RF L YSAEDEAK ERPVMIHRAILGS
Sbjct: 508 GAFYGPKIDITVSDALKRKFQCATVQLDFQLPIRFKLSYSAEDEAKIERPVMIHRAILGS 567
Query: 483 VERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRK 542
VERMFAILLEHY GKWPFWLSPRQAIV P+SEKSQ YA +VR ++ AG+YVDVD TDRK
Sbjct: 568 VERMFAILLEHYAGKWPFWLSPRQAIVVPISEKSQDYAEEVRAQLHAAGFYVDVDVTDRK 627
Query: 543 IQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 600
IQKKVREAQLAQYN+ILVVGE EA +G V+VR RD H IE+LL FKE+ F
Sbjct: 628 IQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAEF 685
|
Length = 686 |
| >gnl|CDD|178496 PLN02908, PLN02908, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238394 cd00771, ThrRS_core, Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|234752 PRK00413, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|184826 PRK14799, thrS, threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|183530 PRK12444, PRK12444, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|237050 PRK12305, thrS, threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|235190 PRK03991, PRK03991, threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223518 COG0441, ThrS, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232967 TIGR00418, thrS, threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238437 cd00860, ThrRS_anticodon, ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|133437 cd01667, TGS_ThrRS_N, TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA | Back alignment and domain information |
|---|
| >gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) | Back alignment and domain information |
|---|
| >gnl|CDD|217243 pfam02824, TGS, TGS domain | Back alignment and domain information |
|---|
| >gnl|CDD|215450 PLN02837, PLN02837, threonine-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|238359 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|184902 PRK14938, PRK14938, Ser-tRNA(Thr) hydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|197931 smart00863, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >gnl|CDD|219676 pfam07973, tRNA_SAD, Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238379 cd00738, HGTP_anticodon, HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) | Back alignment and domain information |
|---|
| >gnl|CDD|238436 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|236405 PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238438 cd00861, ProRS_anticodon_short, ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria | Back alignment and domain information |
|---|
| >gnl|CDD|232961 TIGR00408, proS_fam_I, prolyl-tRNA synthetase, family I | Back alignment and domain information |
|---|
| >gnl|CDD|236327 PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|232951 TIGR00389, glyS_dimeric, glycyl-tRNA synthetase, dimeric type | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 601 | |||
| PLN02908 | 686 | threonyl-tRNA synthetase | 100.0 | |
| PRK12444 | 639 | threonyl-tRNA synthetase; Reviewed | 100.0 | |
| KOG1637 | 560 | consensus Threonyl-tRNA synthetase [Translation, r | 100.0 | |
| PRK00413 | 638 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| COG0441 | 589 | ThrS Threonyl-tRNA synthetase [Translation, riboso | 100.0 | |
| PLN02837 | 614 | threonine-tRNA ligase | 100.0 | |
| PRK12305 | 575 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| TIGR00418 | 563 | thrS threonyl-tRNA synthetase. This model represen | 100.0 | |
| PRK14799 | 545 | thrS threonyl-tRNA synthetase; Provisional | 100.0 | |
| PRK03991 | 613 | threonyl-tRNA synthetase; Validated | 100.0 | |
| PRK12325 | 439 | prolyl-tRNA synthetase; Provisional | 100.0 | |
| cd00771 | 298 | ThrRS_core Threonyl-tRNA synthetase (ThrRS) class | 100.0 | |
| PRK04173 | 456 | glycyl-tRNA synthetase; Provisional | 100.0 | |
| COG0124 | 429 | HisS Histidyl-tRNA synthetase [Translation, riboso | 100.0 | |
| TIGR00408 | 472 | proS_fam_I prolyl-tRNA synthetase, family I. Proly | 100.0 | |
| PRK08661 | 477 | prolyl-tRNA synthetase; Provisional | 100.0 | |
| CHL00201 | 430 | syh histidine-tRNA synthetase; Provisional | 100.0 | |
| PRK09194 | 565 | prolyl-tRNA synthetase; Provisional | 100.0 | |
| PLN02530 | 487 | histidine-tRNA ligase | 99.97 | |
| TIGR00409 | 568 | proS_fam_II prolyl-tRNA synthetase, family II. Pro | 99.97 | |
| PRK00037 | 412 | hisS histidyl-tRNA synthetase; Reviewed | 99.97 | |
| PLN02972 | 763 | Histidyl-tRNA synthetase | 99.96 | |
| PRK14894 | 539 | glycyl-tRNA synthetase; Provisional | 99.96 | |
| TIGR00389 | 551 | glyS_dimeric glycyl-tRNA synthetase, dimeric type. | 99.95 | |
| PRK12420 | 423 | histidyl-tRNA synthetase; Provisional | 99.95 | |
| TIGR00442 | 397 | hisS histidyl-tRNA synthetase. This model finds a | 99.94 | |
| KOG1936 | 518 | consensus Histidyl-tRNA synthetase [Translation, r | 99.93 | |
| PLN02734 | 684 | glycyl-tRNA synthetase | 99.93 | |
| COG0423 | 558 | GRS1 Glycyl-tRNA synthetase (class II) [Translatio | 99.92 | |
| KOG2324 | 457 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.85 | |
| PRK12292 | 391 | hisZ ATP phosphoribosyltransferase regulatory subu | 99.82 | |
| cd00862 | 202 | ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin | 99.76 | |
| cd00858 | 121 | GlyRS_anticodon GlyRS Glycyl-anticodon binding dom | 99.76 | |
| KOG2298 | 599 | consensus Glycyl-tRNA synthetase and related class | 99.75 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 99.74 | |
| PRK12421 | 392 | ATP phosphoribosyltransferase regulatory subunit; | 99.73 | |
| PRK01584 | 594 | alanyl-tRNA synthetase; Provisional | 99.73 | |
| KOG4163 | 551 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.71 | |
| PF03129 | 94 | HGTP_anticodon: Anticodon binding domain; InterPro | 99.71 | |
| PRK14938 | 387 | Ser-tRNA(Thr) hydrolase; Provisional | 99.69 | |
| cd00861 | 94 | ProRS_anticodon_short ProRS Prolyl-anticodon bindi | 99.68 | |
| cd00670 | 235 | Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t | 99.67 | |
| cd02426 | 128 | Pol_gamma_b_Cterm C-terminal domain of mitochondri | 99.66 | |
| cd00778 | 261 | ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) | 99.65 | |
| TIGR00344 | 851 | alaS alanine--tRNA ligase. The model describes ala | 99.62 | |
| PRK00252 | 865 | alaS alanyl-tRNA synthetase; Reviewed | 99.61 | |
| cd00860 | 91 | ThrRS_anticodon ThrRS Threonyl-anticodon binding d | 99.61 | |
| TIGR03683 | 902 | A-tRNA_syn_arch alanyl-tRNA synthetase. This famil | 99.58 | |
| PLN02900 | 936 | alanyl-tRNA synthetase | 99.58 | |
| PRK13902 | 900 | alaS alanyl-tRNA synthetase; Provisional | 99.56 | |
| cd00738 | 94 | HGTP_anticodon HGTP anticodon binding domain, as f | 99.55 | |
| COG0013 | 879 | AlaS Alanyl-tRNA synthetase [Translation, ribosoma | 99.5 | |
| cd00773 | 261 | HisRS-like_core Class II Histidinyl-tRNA synthetas | 99.49 | |
| PLN02961 | 223 | alanine-tRNA ligase | 99.46 | |
| cd00779 | 255 | ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla | 99.42 | |
| cd00770 | 297 | SerRS_core Seryl-tRNA synthetase (SerRS) class II | 99.41 | |
| TIGR00443 | 314 | hisZ_biosyn_reg ATP phosphoribosyltransferase, reg | 99.4 | |
| COG2872 | 241 | Predicted metal-dependent hydrolases related to al | 99.39 | |
| PRK05431 | 425 | seryl-tRNA synthetase; Provisional | 99.35 | |
| cd00772 | 264 | ProRS_core Prolyl-tRNA synthetase (ProRS) class II | 99.34 | |
| TIGR00414 | 418 | serS seryl-tRNA synthetase. This model represents | 99.32 | |
| cd00859 | 91 | HisRS_anticodon HisRS Histidyl-anticodon binding d | 99.3 | |
| PF02824 | 60 | TGS: TGS domain; InterPro: IPR004095 The TGS domai | 99.27 | |
| PRK12293 | 281 | hisZ ATP phosphoribosyltransferase regulatory subu | 99.2 | |
| PF00587 | 173 | tRNA-synt_2b: tRNA synthetase class II core domain | 99.16 | |
| PRK12295 | 373 | hisZ ATP phosphoribosyltransferase regulatory subu | 99.16 | |
| cd00774 | 254 | GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik | 99.12 | |
| PRK00960 | 517 | seryl-tRNA synthetase; Provisional | 99.11 | |
| PLN02320 | 502 | seryl-tRNA synthetase | 99.06 | |
| PF13393 | 311 | tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI | 99.0 | |
| PLN02678 | 448 | seryl-tRNA synthetase | 98.95 | |
| PF07973 | 44 | tRNA_SAD: Threonyl and Alanyl tRNA synthetase seco | 98.87 | |
| KOG0188 | 895 | consensus Alanyl-tRNA synthetase [Translation, rib | 98.75 | |
| COG3705 | 390 | HisZ ATP phosphoribosyltransferase involved in his | 98.71 | |
| TIGR00415 | 520 | serS_MJ seryl-tRNA synthetase, Methanococcus janna | 98.67 | |
| cd01667 | 61 | TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Syn | 98.66 | |
| smart00863 | 44 | tRNA_SAD Threonyl and Alanyl tRNA synthetase secon | 98.65 | |
| cd00768 | 211 | class_II_aaRS-like_core Class II tRNA amino-acyl s | 98.49 | |
| PF12745 | 273 | HGTP_anticodon2: Anticodon binding domain of tRNAs | 98.28 | |
| cd01616 | 60 | TGS The TGS domain, named after the ThrRS, GTPase, | 98.17 | |
| KOG2105 | 415 | consensus Predicted metal-dependent hydrolase, con | 98.02 | |
| cd01668 | 60 | TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) prote | 97.94 | |
| TIGR02367 | 453 | PylS pyrrolysyl-tRNA synthetase. PylS is the archa | 97.56 | |
| PRK07080 | 317 | hypothetical protein; Validated | 97.52 | |
| KOG2509 | 455 | consensus Seryl-tRNA synthetase [Translation, ribo | 97.5 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 97.09 | |
| PRK09537 | 417 | pylS pyrolysyl-tRNA synthetase; Reviewed | 97.05 | |
| PRK12294 | 272 | hisZ ATP phosphoribosyltransferase regulatory subu | 97.0 | |
| PTZ00326 | 494 | phenylalanyl-tRNA synthetase alpha chain; Provisio | 96.97 | |
| COG0172 | 429 | SerS Seryl-tRNA synthetase [Translation, ribosomal | 96.51 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 96.43 | |
| PRK11092 | 702 | bifunctional (p)ppGpp synthetase II/ guanosine-3', | 96.11 | |
| COG0317 | 701 | SpoT Guanosine polyphosphate pyrophosphohydrolases | 95.83 | |
| PRK07440 | 70 | hypothetical protein; Provisional | 95.62 | |
| PRK04172 | 489 | pheS phenylalanyl-tRNA synthetase subunit alpha; P | 95.58 | |
| PRK05659 | 66 | sulfur carrier protein ThiS; Validated | 95.41 | |
| COG2104 | 68 | ThiS Sulfur transfer protein involved in thiamine | 95.23 | |
| PRK10872 | 743 | relA (p)ppGpp synthetase I/GTP pyrophosphokinase; | 95.05 | |
| TIGR00691 | 683 | spoT_relA (p)ppGpp synthetase, RelA/SpoT family. ( | 94.97 | |
| PRK08364 | 70 | sulfur carrier protein ThiS; Provisional | 94.58 | |
| cd00565 | 65 | ThiS ThiaminS ubiquitin-like sulfur carrier protei | 93.84 | |
| PRK06488 | 65 | sulfur carrier protein ThiS; Validated | 93.84 | |
| PRK07696 | 67 | sulfur carrier protein ThiS; Provisional | 93.82 | |
| PRK06944 | 65 | sulfur carrier protein ThiS; Provisional | 93.75 | |
| PRK08053 | 66 | sulfur carrier protein ThiS; Provisional | 93.62 | |
| PRK06083 | 84 | sulfur carrier protein ThiS; Provisional | 92.3 | |
| cd00669 | 269 | Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl | 90.56 | |
| PRK06437 | 67 | hypothetical protein; Provisional | 90.19 | |
| cd00777 | 280 | AspRS_core Asp tRNA synthetase (aspRS) class II co | 90.16 | |
| PRK05863 | 65 | sulfur carrier protein ThiS; Provisional | 90.05 | |
| TIGR01683 | 64 | thiS thiamine biosynthesis protein ThiS. This mode | 89.63 | |
| PF01409 | 247 | tRNA-synt_2d: tRNA synthetases class II core domai | 87.58 | |
| TIGR00470 | 533 | sepS O-phosphoseryl-tRNA(Cys) synthetase. This fam | 87.33 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 85.37 | |
| PRK09350 | 306 | poxB regulator PoxA; Provisional | 84.78 | |
| PRK01777 | 95 | hypothetical protein; Validated | 84.02 | |
| cd00754 | 80 | MoaD Ubiquitin domain of MoaD-like proteins. MoaD | 81.35 | |
| cd01666 | 75 | TGS_DRG_C TGS_DRG_C: DRG (developmentally regulate | 80.97 |
| >PLN02908 threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-121 Score=1039.65 Aligned_cols=557 Identities=76% Similarity=1.250 Sum_probs=535.0
Q ss_pred cCCCCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhhCCCCCCeEEEeCCCcEEEeecCCCCHHHHHHhhhcccccceE
Q 007503 40 CAMPSPNPVKDEEYLIKVIPKRISLFQSLQSEQQARLQSLPHDPIKITLPDGSVKEGKRWETSPMDIAQGISKSLAANAL 119 (601)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~r~~~f~~~~~~~~~~~~~~~~~~I~v~l~dg~~~~~~~~~tt~~dia~~i~~~~~~~~v 119 (601)
+....+...++|+|++ +|++||++++++|++++++++.++|+|++|||+++++++|+|||+|||+++++.++..+|
T Consensus 12 ~~~~~~~~~~~~~~~~----~r~~~f~~~~~~~~~~~~~~~~~~i~i~~~dg~~~~~~~~~tt~~~ia~~i~~~~~~~~v 87 (686)
T PLN02908 12 APSHPSDEEYLSAVIK----KRIELFEKIQARQLARLESAGGDPIKVTLPDGAVKDGKKWVTTPMDIAKEISKGLANSAL 87 (686)
T ss_pred cccCCCCcCCCchhHH----HHHHHHHHHHHHHHHHhhhccCCceEEEeCCCceEeecCCCCCHHHHHHHhCccchhhcE
Confidence 3344556778999999 999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEEEcCEEeeccccccCCCCeEEeeCCChhHHHHHHHHHHHHHHHHHHHHhCCceEEcCccccCCcEEEEEEcCCCCCCH
Q 007503 120 ISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYGCKLCIGPCTTRGEGFYYDAFYGDLGLNP 199 (601)
Q Consensus 120 ~a~Vng~l~dL~~~l~~d~~le~l~~~~~eG~~vy~hS~~hlL~~A~~~~fg~~l~ig~~i~~~~Gfy~d~~~~~~~~t~ 199 (601)
+|+|||++|||++||++||+|+|++|++++|+++||||++|||++|++++||+++++||+++.++|||||+.+++.++|+
T Consensus 88 ~a~Vng~l~dL~~~l~~d~~le~l~~~~~eg~~~y~hS~ahlL~~A~~~~~~~~l~ig~~i~~~~Gfy~d~~~~~~~~t~ 167 (686)
T PLN02908 88 IAQVDGVLWDMTRPLEGDCKLKLFKFDDDEGRDTFWHSSAHILGEALELEYGCKLCIGPCTTRGEGFYYDAFYGDRTLNE 167 (686)
T ss_pred EEEECCEEeecCccccCCCeeEEeccccHHHHHHHHHHHHHHHHHHHHHHhCCeEEecCccccCCcEEEEeecCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999997558999999875568999
Q ss_pred hHHHHHHHHHHHHh--CCCeEEEEeCHHHHHHhhhcChhhhhhcccCCCCCcEEEEEeCCeeeeccCCCCCCCCCcceEE
Q 007503 200 DHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFG 277 (601)
Q Consensus 200 edl~~Ie~~m~~ii--~~pi~r~~v~~eeA~~~F~~~~~K~~li~~~~~~~~v~vy~~g~~~D~c~Gphvp~Tg~i~~f~ 277 (601)
+|+++||++|+++| |+||++.+|+++||++||++++||++|++.++++..|++|+||+|+|+|+||||||||+|+.|+
T Consensus 168 edl~~Ie~~m~~iI~~~~pi~r~~v~~eeA~e~F~~~~~K~~ll~~~~~~~~v~vY~~g~~~D~c~Gphv~sTg~ik~f~ 247 (686)
T PLN02908 168 EDFKPIEARAEKAVKEKQPFERIEVTREEALEMFSENKFKVEIINDLPEDATITVYRCGPLVDLCRGPHIPNTSFVKAFA 247 (686)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEEcHHHHHHHHhhCCcHHHHHhhCCCCCeeEEEEECCEEEecCCCCCCCCCccceeE
Confidence 99999999999999 9999999999999999999999999999988656789999999999999999999999999999
Q ss_pred EeeeccceeccCCCCCCcceeeccccccchhhhh----------------------------------------------
Q 007503 278 CLKASSAYWRGNKDRESLQRVYGISYPDKKRLKH---------------------------------------------- 311 (601)
Q Consensus 278 l~~~~~g~~l~~~~~~~l~ri~g~~fp~~~~l~~---------------------------------------------- 311 (601)
|+++++|||+|+.+++++|||||++||++++|.+
T Consensus 248 l~~~~~~~~lg~~~~~~lqRi~G~sfp~~~~l~~~~~~~~e~~~rdH~~lg~~~~lf~~~~~~~G~~~~lP~g~~i~~~l 327 (686)
T PLN02908 248 CLKASSAYWRGDVDRESLQRVYGISFPDKKLLKEYKHRIEEAKKRDHRLLGQKQELFFFHELSPGSCFFLPHGARIYNKL 327 (686)
T ss_pred EEEecceEEcCCCcchhhEEEeeeccCChHHHHHHHhhhhhccccCHHHHHHhcCCeeecCCCCcceEEechHHHHHHHH
Confidence 9999999999999999999999999999999965
Q ss_pred ---------------------------------------------------------------------hhccCceeeee
Q 007503 312 ---------------------------------------------------------------------AFAELPLRLAD 322 (601)
Q Consensus 312 ---------------------------------------------------------------------s~relplr~~~ 322 (601)
+|+++|+|+++
T Consensus 328 ~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~~Lrp~~~~~~~~~~~~~~~s~r~LPlr~~~ 407 (686)
T PLN02908 328 MDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVFEIEKQEFGLKPMNCPGHCLMFAHRVRSYRELPLRLAD 407 (686)
T ss_pred HHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEEecCCeeEEEcCCCcHHHHHHHhccccChhhCCHhHEE
Confidence 78899999999
Q ss_pred eccccccccCCCCCCceeeeeeeecCeEEEecCchhHHHHHHHHHHHHHHHHHhCcEEEEEEccCCCccCCChhhHHHHH
Q 007503 323 FGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAE 402 (601)
Q Consensus 323 vg~l~R~e~~g~l~gliR~ReF~Q~d~eifg~~~~~d~Ei~~~i~~~~~~l~~lG~~~~l~ls~r~~~~lG~~~~~~~~~ 402 (601)
+|.+||+|.+|.+.||+|+|||+|+|+|+||+++++++|+..+++++.++|+.|||+|++.+|+||++++|+.+.|+.++
T Consensus 408 ~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~~~~~ls~r~~~~~g~~~~w~~ae 487 (686)
T PLN02908 408 FGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFTYELKLSTRPEKYLGDLETWDKAE 487 (686)
T ss_pred eeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEeCCccccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccccCCCCcccccchhhhHHHHHhhhhhhcceeeccCCCcccceeEeecCCCC-cccceEEeccccc
Q 007503 403 AALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAK-TERPVMIHRAILG 481 (601)
Q Consensus 403 ~~L~~~L~~~~~~~~~~~g~~af~gpki~~~~~d~l~~~~~~~ti~ld~~l~~~~~L~Y~t~~~g~-~~~P~~i~~ai~G 481 (601)
..|.++|++.|..|.+++|+++|||||+|+.+.|++++.|+|+|+|+||++|.+|+|+|||++ +. ..+|+|||+||+|
T Consensus 488 ~~l~~~ld~~~~~~~~~~g~~afygpkid~~~~d~l~r~~~~~t~q~df~lp~~f~L~Y~~e~-~~~~~~pv~ihrai~G 566 (686)
T PLN02908 488 AALTEALNAFGKPWQLNEGDGAFYGPKIDITVSDALKRKFQCATVQLDFQLPIRFKLSYSAED-EAKIERPVMIHRAILG 566 (686)
T ss_pred HHHHHHHHHcCCCcEECCCceeecccceEEEEEeccCCEeeccceeecccCHhhcCCEEECCC-CCcCCCCEEEEeCceE
Confidence 999999999999999999999999999999999999999999999999999999999999977 54 5799999999999
Q ss_pred cHHHHHHHHHHhcCCCCCCCCCCceEEEEecCCCcHHHHHHHHHHHHHcCCEEEEeCCCCcHHHHHHHHHhcCCcEEEEE
Q 007503 482 SVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVV 561 (601)
Q Consensus 482 GveRli~iL~E~~~g~~p~~lsp~qv~Vip~~~~~~~~A~~i~~~Lr~~Gi~v~~d~~~~~l~kki~~A~~~g~~~iivv 561 (601)
|+||++++|.|+++|.||+|++|.||+|+|++++..++|.+|++.||++|++|++|.++.+++||+++|++.|+||++||
T Consensus 567 siERli~iL~e~~~g~~p~wlsp~qv~Vipv~~~~~~~A~~va~~LR~~Gi~vevd~~~~~l~kkir~A~~~g~~~viiv 646 (686)
T PLN02908 567 SVERMFAILLEHYAGKWPFWLSPRQAIVVPISEKSQDYAEEVRAQLHAAGFYVDVDVTDRKIQKKVREAQLAQYNYILVV 646 (686)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCCceEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCeEEEEECCCCceecccHHHHHHHHHHHHHhcC
Q 007503 562 GEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAFQ 601 (601)
Q Consensus 562 G~~E~~~~~V~vr~~~~~~q~~v~l~el~~~l~~~~~~~~ 601 (601)
|++|+++|+|+||+|++++|..++++++++.++++.++|.
T Consensus 647 G~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~~~ 686 (686)
T PLN02908 647 GEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAEFK 686 (686)
T ss_pred CchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999988763
|
|
| >PRK12444 threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK00413 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02837 threonine-tRNA ligase | Back alignment and domain information |
|---|
| >PRK12305 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00418 thrS threonyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK14799 thrS threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK03991 threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >PRK12325 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK04173 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I | Back alignment and domain information |
|---|
| >PRK08661 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >CHL00201 syh histidine-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK09194 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PLN02530 histidine-tRNA ligase | Back alignment and domain information |
|---|
| >TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II | Back alignment and domain information |
|---|
| >PRK00037 hisS histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PLN02972 Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK14894 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type | Back alignment and domain information |
|---|
| >PRK12420 histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00442 hisS histidyl-tRNA synthetase | Back alignment and domain information |
|---|
| >KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PLN02734 glycyl-tRNA synthetase | Back alignment and domain information |
|---|
| >COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea | Back alignment and domain information |
|---|
| >cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain | Back alignment and domain information |
|---|
| >KOG2298 consensus Glycyl-tRNA synthetase and related class II tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >PRK01584 alanyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >KOG4163 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis | Back alignment and domain information |
|---|
| >PRK14938 Ser-tRNA(Thr) hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria | Back alignment and domain information |
|---|
| >cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity | Back alignment and domain information |
|---|
| >cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >TIGR00344 alaS alanine--tRNA ligase | Back alignment and domain information |
|---|
| >PRK00252 alaS alanyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
| >TIGR03683 A-tRNA_syn_arch alanyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PLN02900 alanyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK13902 alaS alanyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) | Back alignment and domain information |
|---|
| >COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
| >PLN02961 alanine-tRNA ligase | Back alignment and domain information |
|---|
| >cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
| >COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] | Back alignment and domain information |
|---|
| >PRK05431 seryl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
| >TIGR00414 serS seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain | Back alignment and domain information |
|---|
| >PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) [] | Back alignment and domain information |
|---|
| >PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes | Back alignment and domain information |
|---|
| >PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain | Back alignment and domain information |
|---|
| >PRK00960 seryl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >PLN02320 seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A | Back alignment and domain information |
|---|
| >PLN02678 seryl-tRNA synthetase | Back alignment and domain information |
|---|
| >PF07973 tRNA_SAD: Threonyl and Alanyl tRNA synthetase second additional domain; InterPro: IPR012947 The catalytically active form of threonyl/alanyl tRNA synthetase is a dimer | Back alignment and domain information |
|---|
| >KOG0188 consensus Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00415 serS_MJ seryl-tRNA synthetase, Methanococcus jannaschii family | Back alignment and domain information |
|---|
| >cd01667 TGS_ThrRS_N TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA | Back alignment and domain information |
|---|
| >smart00863 tRNA_SAD Threonyl and Alanyl tRNA synthetase second additional domain | Back alignment and domain information |
|---|
| >cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >PF12745 HGTP_anticodon2: Anticodon binding domain of tRNAs; InterPro: IPR024435 This is an anticodon binding domain, found largely on Gcn2 proteins which bind tRNA to down regulate translation in certain stress situations [] | Back alignment and domain information |
|---|
| >cd01616 TGS The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin | Back alignment and domain information |
|---|
| >KOG2105 consensus Predicted metal-dependent hydrolase, contains AlaS domain [General function prediction only] | Back alignment and domain information |
|---|
| >cd01668 TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a ribosome-associated protein that is activated during amino acid starvation and thought to mediate the stringent response | Back alignment and domain information |
|---|
| >TIGR02367 PylS pyrrolysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >PRK07080 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG2509 consensus Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional | Back alignment and domain information |
|---|
| >COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG0317 SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >PRK07440 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >PRK05659 sulfur carrier protein ThiS; Validated | Back alignment and domain information |
|---|
| >COG2104 ThiS Sulfur transfer protein involved in thiamine biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK10872 relA (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00691 spoT_relA (p)ppGpp synthetase, RelA/SpoT family | Back alignment and domain information |
|---|
| >PRK08364 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein | Back alignment and domain information |
|---|
| >PRK06488 sulfur carrier protein ThiS; Validated | Back alignment and domain information |
|---|
| >PRK07696 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK06944 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK08053 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >PRK06083 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >PRK06437 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain | Back alignment and domain information |
|---|
| >PRK05863 sulfur carrier protein ThiS; Provisional | Back alignment and domain information |
|---|
| >TIGR01683 thiS thiamine biosynthesis protein ThiS | Back alignment and domain information |
|---|
| >PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 | Back alignment and domain information |
|---|
| >TIGR00470 sepS O-phosphoseryl-tRNA(Cys) synthetase | Back alignment and domain information |
|---|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
| >PRK09350 poxB regulator PoxA; Provisional | Back alignment and domain information |
|---|
| >PRK01777 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd00754 MoaD Ubiquitin domain of MoaD-like proteins | Back alignment and domain information |
|---|
| >cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 601 | ||||
| 3ugq_A | 460 | Crystal Structure Of The Apo Form Of The Yeast Mito | 2e-71 | ||
| 1evk_A | 401 | Crystal Structure Of A Truncated Form Of Threonyl-T | 2e-68 | ||
| 1qf6_A | 642 | Structure Of E. Coli Threonyl-Trna Synthetase Compl | 3e-68 | ||
| 1nyq_A | 645 | Structure Of Staphylococcus Aureus Threonyl-Trna Sy | 1e-57 | ||
| 3a32_A | 471 | Crystal Structure Of Putative Threonyl-Trna Synthet | 5e-33 | ||
| 3a31_A | 471 | Crystal Structure Of Putative Threonyl-Trna Synthet | 9e-32 | ||
| 1tje_A | 224 | Crystal Structure Of The Editing Domain Of Threonyl | 7e-30 | ||
| 1wwt_A | 88 | Solution Structure Of The Tgs Domain From Human Thr | 7e-16 | ||
| 1qe0_A | 420 | Crystal Structure Of Apo S. Aureus Histidyl-Trna Sy | 7e-05 |
| >pdb|3UGQ|A Chain A, Crystal Structure Of The Apo Form Of The Yeast Mitochondrial Threonyl- Trna Synthetase Determined At 2.1 Angstrom Resolution Length = 460 | Back alignment and structure |
|
| >pdb|1EVK|A Chain A, Crystal Structure Of A Truncated Form Of Threonyl-Trna Synthetase With The Ligand Threonine Length = 401 | Back alignment and structure |
| >pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642 | Back alignment and structure |
| >pdb|1NYQ|A Chain A, Structure Of Staphylococcus Aureus Threonyl-Trna Synthetase Complexed With An Analogue Of Threonyl Adenylate Length = 645 | Back alignment and structure |
| >pdb|3A32|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix Length = 471 | Back alignment and structure |
| >pdb|3A31|A Chain A, Crystal Structure Of Putative Threonyl-Trna Synthetase Thrrs-1 From Aeropyrum Pernix (Selenomethionine Derivative) Length = 471 | Back alignment and structure |
| >pdb|1TJE|A Chain A, Crystal Structure Of The Editing Domain Of Threonyl-Trna Synthetase Length = 224 | Back alignment and structure |
| >pdb|1WWT|A Chain A, Solution Structure Of The Tgs Domain From Human Threonyl- Trna Synthetase Length = 88 | Back alignment and structure |
| >pdb|1QE0|A Chain A, Crystal Structure Of Apo S. Aureus Histidyl-Trna Synthetase Length = 420 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Length = 460 | Back alignment and structure |
|---|
Score = 488 bits (1259), Expect = e-169
Identities = 129/315 (40%), Positives = 192/315 (60%), Gaps = 29/315 (9%)
Query: 315 ELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYR 374
ELPLR +DF LHRNEASGAL+GLTR+R+F QDD HIFC SQ+K E+ L+ ID Y
Sbjct: 147 ELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYN 206
Query: 375 -IFGFT---------YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGA 424
IF F Y + STRP+ ++GDL W AE L E L E GKPW++N GDGA
Sbjct: 207 KIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGA 266
Query: 425 FYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVE 484
FYGPK+DI V+D L++ Q AT+QLDFQLP+RF+L + +D + +RP+MIHRA GS+E
Sbjct: 267 FYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSY-KRPIMIHRATFGSIE 325
Query: 485 RMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRD-----------------HI 527
R A+L++ +G+WPFWL+P QA++ PV+ K+ +
Sbjct: 326 RFMALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPL 385
Query: 528 YRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRD-QGDHSNMSI 586
+ VD+D + + +++ A L Y+++++VG+EE + + ++R RD + +++
Sbjct: 386 NDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTM 445
Query: 587 EDLLKHFKEKLEAFQ 601
+ + F E + ++
Sbjct: 446 SQIWEKFIELEKNYK 460
|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Length = 401 | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Length = 642 | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Length = 645 | Back alignment and structure |
|---|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Length = 471 | Back alignment and structure |
|---|
| >1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* Length = 224 | Back alignment and structure |
|---|
| >1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288 | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Length = 522 | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 | Back alignment and structure |
|---|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A Length = 421 | Back alignment and structure |
|---|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 Length = 420 | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Length = 501 | Back alignment and structure |
|---|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* Length = 423 | Back alignment and structure |
|---|
| >1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Length = 130 | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Length = 459 | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Length = 572 | Back alignment and structure |
|---|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} Length = 467 | Back alignment and structure |
|---|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Length = 477 | Back alignment and structure |
|---|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* Length = 458 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 601 | |||
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 100.0 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 100.0 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 100.0 | |
| 1tke_A | 224 | Threonyl-tRNA synthetase; ligase; 1.46A {Escherich | 100.0 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 100.0 | |
| 3a32_A | 471 | Probable threonyl-tRNA synthetase 1; aeropyrum per | 100.0 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 100.0 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 100.0 | |
| 2zt5_A | 693 | Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP | 100.0 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 100.0 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 100.0 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 100.0 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 100.0 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 100.0 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 100.0 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 100.0 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 100.0 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 100.0 | |
| 3ikl_A | 459 | DNA polymerase subunit gamma-2, mitochondrial; tra | 100.0 | |
| 1g5h_A | 454 | Mitochondrial DNA polymerase accessory subunit; in | 100.0 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 100.0 | |
| 4g85_A | 517 | Histidine-tRNA ligase, cytoplasmic; synthetase; 3. | 100.0 | |
| 4g84_A | 464 | Histidine--tRNA ligase, cytoplasmic; synthetase; 2 | 100.0 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 99.98 | |
| 1v4p_A | 157 | Alanyl-tRNA synthetase; alanine-tRNA ligase, riken | 99.94 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 99.85 | |
| 2ztg_A | 739 | Alanyl-tRNA synthetase; class-II aminoacyl-tRNA sy | 99.83 | |
| 3kew_A | 241 | DHHA1 domain protein; structural genomics, PSI-2, | 99.83 | |
| 2zze_A | 752 | Alanyl-tRNA synthetase; ligase, hydrolase; HET: ML | 99.77 | |
| 2e1b_A | 216 | PH0108, 216AA long hypothetical alanyl-tRNA synthe | 99.77 | |
| 1v95_A | 130 | Nuclear receptor coactivator 5; coactivator indepe | 99.72 | |
| 2dq3_A | 425 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.7 | |
| 1wwt_A | 88 | Threonyl-tRNA synthetase, cytoplasmic; TGS domain, | 99.68 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.64 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 99.61 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 99.57 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 99.52 | |
| 1ses_A | 421 | Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A | 99.5 | |
| 1wle_A | 501 | Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo | 99.46 | |
| 3vbb_A | 522 | Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l | 99.22 | |
| 3lss_A | 484 | Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.19 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 99.19 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 99.18 | |
| 3qne_A | 485 | Seryl-tRNA synthetase, cytoplasmic; amino acid bio | 99.16 | |
| 2kmm_A | 73 | Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohy | 99.1 | |
| 3hvz_A | 78 | Uncharacterized protein; alpha-beta protein, struc | 98.9 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 98.53 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 97.91 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 96.77 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 94.95 | |
| 1tyg_B | 87 | YJBS; alpha beta barrel, protein-protein complex, | 94.87 | |
| 2l32_A | 74 | Small archaeal modifier protein 2; protein BIN; NM | 94.05 | |
| 1f0z_A | 66 | THis protein; ubiquitin fold, transport protein; N | 93.88 | |
| 1ryj_A | 70 | Unknown; beta/alpha protein, structural genomics, | 93.65 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 93.46 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 93.39 | |
| 2cu3_A | 64 | Unknown function protein; thermus thermophilus HB8 | 93.09 | |
| 2k5p_A | 78 | THis protein, thiamine-biosynthesis protein; NESG, | 93.06 | |
| 2kl0_A | 73 | Putative thiamin biosynthesis THis; structural gen | 92.94 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 92.92 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 92.6 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 91.14 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 89.5 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 88.68 | |
| 3l4g_A | 508 | Phenylalanyl-tRNA synthetase alpha chain; aminoacy | 85.98 | |
| 1rws_A | 77 | Hypothetical protein PF1061; residual dipolar coup | 85.32 | |
| 2du3_A | 534 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 83.9 | |
| 2eki_A | 93 | DRG 1, developmentally-regulated GTP-binding prote | 83.49 | |
| 1vjk_A | 98 | Molybdopterin converting factor, subunit 1; struct | 80.42 |
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-105 Score=907.50 Aligned_cols=512 Identities=41% Similarity=0.744 Sum_probs=491.5
Q ss_pred eEEEeCCCcEEEeecCCCCHHHHHHhhhcccccceEEEEEcCEEeeccccccCCCCeEEeeCCChhHHHHHHHHHHHHHH
Q 007503 84 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILG 163 (601)
Q Consensus 84 I~v~l~dg~~~~~~~~~tt~~dia~~i~~~~~~~~v~a~Vng~l~dL~~~l~~d~~le~l~~~~~eG~~vy~hS~~hlL~ 163 (601)
|+||+|||++++++. +|||+|||++|++++++.+++|+|||++|||++||+.||+|++|+|+|++|++++|||++|||+
T Consensus 2 ~~~~~~d~~~~~~~~-~~t~~~~a~~i~~~~~~~~~~~~vng~~~dl~~~l~~d~~~~~~~~~~~~~~~~~~HSa~HlL~ 80 (642)
T 1qf6_A 2 PVITLPDGSQRHYDH-AVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLG 80 (642)
T ss_dssp CEEECTTSCEEECSS-CBCHHHHHHHHCHHHHHHCSEEEETTEEEETTSCBCSCEECCEECTTSHHHHHHHHHHHHHHHH
T ss_pred ceEEcCCCCeEEecC-CCCHHHHHHHhchhhhhheEEEEECCEEeccccccCCCceEEEeecCcHHHHHHHHHHHHHHHH
Confidence 899999999999887 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-CCceEEcCccccCCcEEEEEEcCCCCCCHhHHHHHHHHHHHHh--CCCeEEEEeCHHHHHHhhhc--Chhhh
Q 007503 164 QAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEVTRDQALEMFSD--NNFKV 238 (601)
Q Consensus 164 ~A~~~~f-g~~l~ig~~i~~~~Gfy~d~~~~~~~~t~edl~~Ie~~m~~ii--~~pi~r~~v~~eeA~~~F~~--~~~K~ 238 (601)
+|++++| ++++++||+++ +||||||++ +.++|++|+++||++|+++| |+||++.++|++||+++|+. ++||+
T Consensus 81 ~Al~~~~~~~~~~~G~~i~--~gfy~Df~~-~~~~t~edl~~IE~~m~~iI~~~~~v~~~~~~~~eA~~~~~~~~e~yk~ 157 (642)
T 1qf6_A 81 HAIKQLWPHTKMAIGPVID--NGFYYDVDL-DRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKV 157 (642)
T ss_dssp HHHHHHCTTCEECCCCEET--TEEEEEEEC-SSCCCHHHHHHHHHHHHHHHHHTCBEEEEECCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhCCCcEEEECCccC--CeeEEEEeC-CCCCCHHHHHHHHHHHHHHHHcCCCEEEEEecHHHHHHHhhhhCCcchh
Confidence 9999999 67999999999 999999997 56899999999999999999 99999999999999999997 78999
Q ss_pred hhc-ccCCCCCcEEEEEeCCeeeeccCCCCCCCCCcceEEEeeeccceeccCCCCCCcceeeccccccchhhhh------
Q 007503 239 EII-NDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKRLKH------ 311 (601)
Q Consensus 239 ~li-~~~~~~~~v~vy~~g~~~D~c~Gphvp~Tg~i~~f~l~~~~~g~~l~~~~~~~l~ri~g~~fp~~~~l~~------ 311 (601)
+|+ +.+|.++.|++|+||+|+|+|+||||||||+|+.|+|++.+++||+++.++..+||+||++||+++.|.+
T Consensus 158 ~li~~~~~~~~~v~vy~~g~~~dlC~GpHv~~Tg~I~~fkl~~~~~~yw~g~~~~~~l~r~~g~~~~~~~~l~~~~~~~e 237 (642)
T 1qf6_A 158 SILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLE 237 (642)
T ss_dssp HHHHHHSCTTCCCEEEEETTEEECCSSCCCSBGGGCCSEEEEEEEEEEGGGCTTSCEEEEEEEEECSSHHHHHHHHHHHH
T ss_pred hhhhcccCCCCceEEEEECCEEEecCCCccCCCCcceeEEEeeeccccccCccCCceeEeeeccccCchhHHhhhhhhhh
Confidence 999 8776667899999999999999999999999999999999999999999999999999999999987732
Q ss_pred --------------------------------------------------------------------------------
Q 007503 312 -------------------------------------------------------------------------------- 311 (601)
Q Consensus 312 -------------------------------------------------------------------------------- 311 (601)
T Consensus 238 ea~~rdH~~lg~~l~l~~~~~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~m 317 (642)
T 1qf6_A 238 EAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAM 317 (642)
T ss_dssp HHHTTCHHHHHHHTTCEECCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGC
T ss_pred ccccCCHHHHHHhcCccccccCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCccccccccc
Confidence
Q ss_pred -----------------------------hhccCceeeeeeccccccccCCCCCCceeeeeeeecCeEEEecCchhHHHH
Q 007503 312 -----------------------------AFAELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEV 362 (601)
Q Consensus 312 -----------------------------s~relplr~~~vg~l~R~e~~g~l~gliR~ReF~Q~d~eifg~~~~~d~Ei 362 (601)
+|+++|+|++++|.+||+|.+|...||+|+|||+|+|+|+||+++++++|+
T Consensus 318 y~~d~~~~~~~LrP~~~~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~~~~~~e~ 397 (642)
T 1qf6_A 318 FTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEV 397 (642)
T ss_dssp EEEEETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHH
T ss_pred eeeecCCceEEecCCCCHHHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCHHHHHHHH
Confidence 788999999999999999999888999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHhCcE-EEEEEccCCCccCCChhhHHHHHHHHHHHHHHcCCCccccCCCCcccccchhhhHHHHHhhh
Q 007503 363 RGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRK 441 (601)
Q Consensus 363 ~~~i~~~~~~l~~lG~~-~~l~ls~r~~~~lG~~~~~~~~~~~L~~~L~~~~~~~~~~~g~~af~gpki~~~~~d~l~~~ 441 (601)
..+++++.++|+.|||+ |.+.++++|++++|+.+.|+.++..|+++|+..|++|..++|+++||||++++.+.|++|+.
T Consensus 398 ~~~i~~~~~i~~~lGl~~~~v~l~~~~e~~~g~~e~w~~a~~~l~~~l~~~g~~~~~~~g~~afygpk~d~~~~d~~G~~ 477 (642)
T 1qf6_A 398 NGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRA 477 (642)
T ss_dssp HHHHHHHHHHHGGGTCCCCEEEEECCCSSCCSCHHHHHHHHHHHHHHHHTTTCCCEEETTCSCTTCCEEEEEEECTTCCE
T ss_pred HHHHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHHHHHHHHHHHHHHcCCCcEEcCCCcccccCcccEEEEccCCce
Confidence 99999999999999995 99999999988999999999999999999999999999999999999999999999999999
Q ss_pred hhhcceeeccCCCcccceeEeecCCCCcccceEEeccccccHHHHHHHHHHhcCCCCCCCCCCceEEEEecCCCcHHHHH
Q 007503 442 FQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYAL 521 (601)
Q Consensus 442 ~~~~ti~ld~~l~~~~~L~Y~t~~~g~~~~P~~i~~ai~GGveRli~iL~E~~~g~~p~~lsp~qv~Vip~~~~~~~~A~ 521 (601)
|+|+|+++||++|.+||+.|.+.+ |+..+|+|+|+|++||+||++++|+|+++|.||.|++|.||+|+|++++..++|.
T Consensus 478 ~~~gti~~df~l~~r~~~~y~~~~-g~~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~~~~~~~a~ 556 (642)
T 1qf6_A 478 WQCGTVQLDFSLPSRLSASYVGED-NERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVN 556 (642)
T ss_dssp EEEEEEEEESSHHHHTTCCEECTT-SCEECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHH
T ss_pred EEeeeEEEeccCCccCCCEEEecC-CCCcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeCHHHHHHHH
Confidence 999999999999999999998776 6677899999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCcHHHHHHHHHhcCCcEEEEEcccccccCeEEEEECCCCceecccHHHHHHHHHHHHHhc
Q 007503 522 QVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 600 (601)
Q Consensus 522 ~i~~~Lr~~Gi~v~~d~~~~~l~kki~~A~~~g~~~iivvG~~E~~~~~V~vr~~~~~~q~~v~l~el~~~l~~~~~~~ 600 (601)
+|++.||++|++|++|+++.++++||++|++.|+||+||||++|+++|+|+||+|++++|..++++++++.+++++++|
T Consensus 557 ~v~~~L~~~Gi~v~~D~~~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 557 ELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp HHHHHHHTTTCCEEEECCSSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCEEEEECCCCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988776
|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
| >1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A* | Back alignment and structure |
|---|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A | Back alignment and structure |
|---|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
| >3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* | Back alignment and structure |
|---|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
| >4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
| >1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A | Back alignment and structure |
|---|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
| >2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens} | Back alignment and structure |
|---|
| >2zze_A Alanyl-tRNA synthetase; ligase, hydrolase; HET: MLY; 2.16A {Pyrococcus horikoshii} PDB: 2zzf_A 2zzg_A* | Back alignment and structure |
|---|
| >2e1b_A PH0108, 216AA long hypothetical alanyl-tRNA synthetase; zinc-binding motif, trans-editing enzyme, structural genomics, NPPSFA; 2.70A {Pyrococcus horikoshii} SCOP: b.43.3.6 d.67.1.2 | Back alignment and structure |
|---|
| >1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 | Back alignment and structure |
|---|
| >2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1wwt_A Threonyl-tRNA synthetase, cytoplasmic; TGS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, ligase; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* | Back alignment and structure |
|---|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
| >1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A | Back alignment and structure |
|---|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} | Back alignment and structure |
|---|
| >3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
| >3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* | Back alignment and structure |
|---|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
| >3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A | Back alignment and structure |
|---|
| >2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum} | Back alignment and structure |
|---|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
| >1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2 | Back alignment and structure |
|---|
| >2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii} | Back alignment and structure |
|---|
| >1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2 | Back alignment and structure |
|---|
| >1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2 | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
| >2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E | Back alignment and structure |
|---|
| >2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
| >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A | Back alignment and structure |
|---|
| >2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* | Back alignment and structure |
|---|
| >2eki_A DRG 1, developmentally-regulated GTP-binding protein 1; protein NEDD3, neural precursor cell expressed developmentally DOWN-regulated protein 3; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 601 | ||||
| d1qf6a4 | 291 | d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th | 3e-60 | |
| d1nyra4 | 291 | d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (Th | 2e-44 | |
| d1nyra3 | 179 | d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrR | 3e-43 | |
| d1tkea2 | 162 | d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrR | 1e-34 | |
| d1nyra1 | 113 | c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (Thr | 4e-25 | |
| d1g5ha2 | 290 | d.104.1.1 (A:41-330) The aaRS-like accessory subun | 5e-25 | |
| d1qf6a1 | 110 | c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (Thr | 1e-23 | |
| d1b76a2 | 331 | d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) | 2e-22 | |
| d1g5ha1 | 127 | c.51.1.1 (A:343-469) The aaRS-like accessory subun | 4e-19 | |
| d1qe0a1 | 95 | c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (His | 2e-17 | |
| d1h4vb1 | 96 | c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (His | 6e-17 | |
| d1nj1a1 | 127 | c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS | 7e-17 | |
| d1tkea1 | 62 | d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS | 9e-16 | |
| d1nj8a1 | 126 | c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS | 3e-15 | |
| d1atia1 | 111 | c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS | 5e-15 | |
| d1hc7a1 | 127 | c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS | 1e-14 | |
| d1kmma1 | 99 | c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (His | 1e-14 | |
| d1nyra2 | 59 | d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS | 2e-14 | |
| d1wu7a1 | 97 | c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (His | 2e-14 | |
| d1v4pa_ | 151 | d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeo | 4e-14 | |
| d1hc7a2 | 272 | d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) | 5e-13 | |
| d1nj8a3 | 268 | d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) | 6e-10 | |
| d1nj1a3 | 265 | d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS | 3e-09 | |
| d2e1ba2 | 129 | d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C | 2e-04 |
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Escherichia coli [TaxId: 562]
Score = 200 bits (509), Expect = 3e-60
Identities = 102/237 (43%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 265 PHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPD----KKRLKHAFAELPLRL 320
P + + + G + ++ P + ++ +LPLR+
Sbjct: 55 PFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRM 114
Query: 321 ADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT- 379
A+FG HRNE SG+L GL RVR F QDDAHIFC E QI+DEV G + + Y FGF
Sbjct: 115 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 174
Query: 380 YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALK 439
+KLSTRPEK +G W++AEA L AL E P++ G+GAFYGPKI+ ++ D L
Sbjct: 175 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 234
Query: 440 RKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKG 496
R +QC T+QLDF LP R + Y ED + PVMIHRAILGS+ER IL E + G
Sbjct: 235 RAWQCGTVQLDFSLPSRLSASYVGEDNERK-VPVMIHRAILGSMERFIGILTEEFAG 290
|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Length = 291 | Back information, alignment and structure |
|---|
| >d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 179 | Back information, alignment and structure |
|---|
| >d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Length = 162 | Back information, alignment and structure |
|---|
| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 113 | Back information, alignment and structure |
|---|
| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 290 | Back information, alignment and structure |
|---|
| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 110 | Back information, alignment and structure |
|---|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Length = 331 | Back information, alignment and structure |
|---|
| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 95 | Back information, alignment and structure |
|---|
| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 96 | Back information, alignment and structure |
|---|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 127 | Back information, alignment and structure |
|---|
| >d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]} Length = 62 | Back information, alignment and structure |
|---|
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 126 | Back information, alignment and structure |
|---|
| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 111 | Back information, alignment and structure |
|---|
| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Length = 127 | Back information, alignment and structure |
|---|
| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 | Back information, alignment and structure |
|---|
| >d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]} Length = 59 | Back information, alignment and structure |
|---|
| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 97 | Back information, alignment and structure |
|---|
| >d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 151 | Back information, alignment and structure |
|---|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Length = 272 | Back information, alignment and structure |
|---|
| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Length = 268 | Back information, alignment and structure |
|---|
| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Length = 265 | Back information, alignment and structure |
|---|
| >d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 129 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 601 | |||
| d1tkea2 | 162 | Threonyl-tRNA synthetase (ThrRS), second 'addition | 100.0 | |
| d1nyra3 | 179 | Threonyl-tRNA synthetase (ThrRS), second 'addition | 100.0 | |
| d1qf6a4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Escherichia coli | 100.0 | |
| d1nyra4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a | 99.98 | |
| d1nyra1 | 113 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.92 | |
| d1qf6a1 | 110 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.9 | |
| d1nj1a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me | 99.84 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 99.83 | |
| d1v4pa_ | 151 | Hypothetical protein PH0574 {Archaeon Pyrococcus h | 99.81 | |
| d1nj8a1 | 126 | Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M | 99.81 | |
| d1g5ha1 | 127 | The aaRS-like accessory subunit of mitochondrial p | 99.78 | |
| d1hc7a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Thermus the | 99.77 | |
| d1kmma1 | 99 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.77 | |
| d1wu7a1 | 97 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.75 | |
| d1atia1 | 111 | Glycyl-tRNA synthetase (GlyRS), C-terminal domain | 99.74 | |
| d1qe0a1 | 95 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.74 | |
| d1h4vb1 | 96 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.72 | |
| d1nj8a3 | 268 | Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc | 99.57 | |
| d1g5ha2 | 290 | The aaRS-like accessory subunit of mitochondrial p | 99.57 | |
| d1tkea1 | 62 | Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi | 99.47 | |
| d1nj1a3 | 265 | Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth | 99.43 | |
| d1nyra2 | 59 | Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi | 99.42 | |
| d2e1ba2 | 129 | AlaX-M trans-editing enzyme, C-terminal domain {Py | 99.42 | |
| d1hc7a2 | 272 | Prolyl-tRNA synthetase (ProRS) {Thermus thermophil | 99.37 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 99.33 | |
| d1z7ma1 | 318 | ATP phosphoribosyltransferase regulatory subunit H | 99.29 | |
| d1h4vb2 | 324 | Histidyl-tRNA synthetase (HisRS) {Thermus thermoph | 99.27 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 99.22 | |
| d1wu7a2 | 327 | Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop | 99.18 | |
| d1seta2 | 311 | Seryl-tRNA synthetase (SerRS) {Thermus thermophilu | 99.03 | |
| d1usya_ | 275 | ATP phosphoribosyltransferase regulatory subunit H | 98.93 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 98.82 | |
| d1v95a_ | 130 | Nuclear receptor coactivator 5 (KIAA1637) {Human ( | 97.73 | |
| d1wxqa2 | 76 | GTP-binding protein PH0525 {Pyrococcus horikoshii | 93.96 | |
| d1zud21 | 65 | Thiamin biosynthesis sulfur carrier protein ThiS { | 91.56 | |
| d1tygb_ | 65 | Thiamin biosynthesis sulfur carrier protein ThiS { | 88.0 | |
| d2cu3a1 | 63 | Uncharacterised protein TTHA0675 {Thermus thermoph | 83.9 |
| >d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: RRF/tRNA synthetase additional domain-like superfamily: ThrRS/AlaRS common domain family: Threonyl-tRNA synthetase (ThrRS), second 'additional' domain domain: Threonyl-tRNA synthetase (ThrRS), second 'additional' domain species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-40 Score=312.12 Aligned_cols=155 Identities=35% Similarity=0.693 Sum_probs=145.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHh-CCceEEcCccccCCcEEEEEEcCCCCCCHhHHHHHHHHHHHHh--CCCeEEEEe
Q 007503 146 DSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAA--KQPFERIEV 222 (601)
Q Consensus 146 ~~~eG~~vy~hS~~hlL~~A~~~~f-g~~l~ig~~i~~~~Gfy~d~~~~~~~~t~edl~~Ie~~m~~ii--~~pi~r~~v 222 (601)
.|+||.++||||++|||++|++++| ++++.+||+++ +||||||.. +.+++++|+.+||++|+++| ++||++..+
T Consensus 1 kd~egl~v~rhS~ahlLa~Av~~l~p~~kl~~g~~~~--~GfyyD~~~-~~~~~~edl~~ie~~m~~ii~~~~~~~~~~~ 77 (162)
T d1tkea2 1 KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVID--NGFYYDVDL-DRTLTQEDVEALEKRMHELAEKNYDVIKKKV 77 (162)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCCEET--TEEEEEEEC-SSCCCHHHHHHHHHHHHHHHTTCCBCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEeccccC--CeEEEEeec-cCCCCHHHHHHHHHHHHHHHHhcCCceEEEe
Confidence 4689999999999999999999999 89999999999 999999986 67899999999999999999 999999999
Q ss_pred CHHHHHHhhhcChh--hhhhccc-CCCCCcEEEEEeCCeeeeccCCCCCCCCCcceEEEeeeccceeccCCCCCCcceee
Q 007503 223 TRDQALEMFSDNNF--KVEIIND-LPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVY 299 (601)
Q Consensus 223 ~~eeA~~~F~~~~~--K~~li~~-~~~~~~v~vy~~g~~~D~c~Gphvp~Tg~i~~f~l~~~~~g~~l~~~~~~~l~ri~ 299 (601)
++++|+++|..+++ |..++.. .+.+..+++|+||+|+|+|+||||||||.|++|+|++.+++||+|+++|++|||||
T Consensus 78 s~~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~y~~g~~~dlc~Gphv~sTg~ik~FkL~~vsgaYw~gd~~n~~LqRiy 157 (162)
T d1tkea2 78 SWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIY 157 (162)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHSCTTCCCEEEEETTEEEEESCCCCSBGGGCCCEEEEEEEEEEGGGCTTSCEEEEEE
T ss_pred chHHHHHHHHHhhcchhhheeeccccccccceeeccCceEeecCCCccccCcccceEEEEEechhhcCCCCCCcccEEEE
Confidence 99999999998654 7677755 44567899999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 007503 300 GISY 303 (601)
Q Consensus 300 g~~f 303 (601)
|++|
T Consensus 158 g~af 161 (162)
T d1tkea2 158 GTAW 161 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9998
|
| >d1nyra3 d.67.1.1 (A:63-241) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1v4pa_ d.67.1.2 (A:) Hypothetical protein PH0574 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
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| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
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| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
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| >d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
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| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
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| >d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} | Back information, alignment and structure |
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| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wxqa2 d.15.10.2 (A:320-395) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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| >d1zud21 d.15.3.2 (2:2-66) Thiamin biosynthesis sulfur carrier protein ThiS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d2cu3a1 d.15.3.2 (A:1-63) Uncharacterised protein TTHA0675 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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