Citrus Sinensis ID: 007547

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------60
MSTGSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVPLKPLSAKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
cccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHcccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEEccccccccccccEEEEEccccHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHccccccccccccccccccccEEEEEEEEEEEcccccccEEccccHHHHHcccccccccccEEEEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccc
ccccccccEEEEEccccccccHHHHHHHHHHHEcccHEEHHHHEEEEEccccccccccccccccccccccccHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEcHHHccccHHHHHHHcccccEEEEEEEEEcccEEcHHHHHHHHHHHHcccccccccccEEEEEEEEccccccccHHHHHHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccccccccEEEcccccccHHcccccccccccccccEEEEEEEcccccccccEEEEEEEEccccEEEccccEEEEEccccHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccEEHHHHHHHcEcccccccHHHHHHHHHHEccHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHcccccccHHHHHHHHccEcccEEEEccccccccccEEEEEEEccEEEcccccEEEcHHHHHHHccccccccccccEEEEEEEcccccccccccccEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccEEEHHHHcc
MSTGSGSDLVKFVESALgvslgdsvTDTVILIATTSFAVVIGLLVLVWKksssdrskevkpvvplkplsakdeddeadiaagkTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKvvdlddyamdDEQYEEKLKKETLAFFMVAtygdgeptdnaARFYKWFtegndrgpwlqqLKFGvfglgnrqyehFNKIGIVLDEELCkqggarlvplglgdddqcieDDFTAWRELVWPELDQllrdeddantvstpytaaipeyrvmihgptvtssvdnysnmpngnasfdihhpcrVNVAVRRelhkpdsdrscihlefdvsgtgityetgdhvgvYVENCDETVEEAGKLLGQSLELLFSLhtdnedgtprgssltppfpgpctlRTALARYADILNPPRKAALIALAAHATEPSEAERLkflsspqgkddysqWVVASQRSLLEVMaefpsatppigVFFAAvaphlqpryysisssprfapdrVHVTCALvygptptgrihkgvCSTWmknaiplegngdcswapifirpsnfklpanpsvpiimvgpgtglapfRGFLQERMALKQDgaqlgpallffgcrnRRMVRIFCYLLQL
MSTGSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVwkksssdrskevkpvvplkplsakdeddeadiaAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTpytaaipeyrvMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHkpdsdrscihLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGtprgssltppfpGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLsspqgkddysQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYgptptgrihkgVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPAllffgcrnrRMVRIFCYLLQL
MSTGSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVPLKPLSakdeddeadiaaGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKllgqslellfslHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKaalialaahaTEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
********LVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWK******************************AAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLH******************GPCTLRTALARYADILNPPRKAALIALAA**********************YSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLL**
************************VTDTVILIATTSFAVVIGLLVLVW*************************************VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND*GPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDD********TAAIPEYRVMIH***********************HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
********LVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKK**********PVVPLKPLSAKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDN**********TPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
*STGSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKS**********VVPLKPL*AKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSTGSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVPLKPLSAKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query599 2.2.26 [Sep-21-2011]
P37116690 NADPH--cytochrome P450 re N/A no 0.979 0.850 0.800 0.0
Q9SB48692 NADPH--cytochrome P450 re yes no 0.974 0.843 0.738 0.0
Q05001714 NADPH--cytochrome P450 re N/A no 0.934 0.784 0.692 0.0
Q9SUM3711 NADPH--cytochrome P450 re no no 0.933 0.786 0.679 0.0
Q3SYT8678 NADPH--cytochrome P450 re yes no 0.913 0.806 0.372 1e-105
P37040678 NADPH--cytochrome P450 re yes no 0.904 0.799 0.377 1e-105
P04175678 NADPH--cytochrome P450 re yes no 0.913 0.806 0.374 1e-105
P37039678 NADPH--cytochrome P450 re yes no 0.913 0.806 0.375 1e-105
Q27597679 NADPH--cytochrome P450 re yes no 0.871 0.768 0.405 1e-105
P00388678 NADPH--cytochrome P450 re yes no 0.909 0.803 0.371 1e-104
>sp|P37116|NCPR_VIGRR NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata PE=1 SV=1 Back     alignment and function desciption
 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/591 (80%), Positives = 527/591 (89%), Gaps = 4/591 (0%)

Query: 4   GSGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVV 63
            S SDLV+ VES LGVSLGDSV+D+++LIATTS AVV+GLLV +WKKSS DRSKEVKPVV
Sbjct: 2   ASNSDLVRAVESFLGVSLGDSVSDSLLLIATTSAAVVVGLLVFLWKKSS-DRSKEVKPVV 60

Query: 64  PLKPLSAKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD 123
             + L  ++E+ E D+AAGKTKVT+F+GTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD
Sbjct: 61  VPRDLMMEEEE-EVDVAAGKTKVTIFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD 119

Query: 124 DYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGND-RGPWLQQLKFGV 182
           DYA DD+ YEEKLKKE+L FFM+ATYGDGEP DNAARFYKWFTEG D RG WLQ+L +GV
Sbjct: 120 DYAADDDLYEEKLKKESLVFFMLATYGDGEPIDNAARFYKWFTEGKDERGIWLQKLTYGV 179

Query: 183 FGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQL 242
           FGLGNRQYEHFNKIG V+DEEL +QG  RLV +GLGDDDQ IEDDF+AW+E +W ELDQL
Sbjct: 180 FGLGNRQYEHFNKIGKVVDEELAEQGAKRLVAVGLGDDDQSIEDDFSAWKESLWSELDQL 239

Query: 243 LRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVR 302
           LRDEDDANTVSTPYTAAI EYRV+IH PT  S+ DN+S + NGN  FDIHHPCRVNVAV+
Sbjct: 240 LRDEDDANTVSTPYTAAILEYRVVIHDPTAASTYDNHSTVANGNTEFDIHHPCRVNVAVQ 299

Query: 303 RELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSL 362
           +ELHKP+SDRSCIHLEFD+SGT ITY+TGDHVGVY ENC+ETVEE GKLLGQ+L+L FSL
Sbjct: 300 KELHKPESDRSCIHLEFDISGTSITYDTGDHVGVYAENCNETVEETGKLLGQNLDLFFSL 359

Query: 363 HTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLK 422
           HTD +DGT  G SL PPFPGPC+LRTALARYAD+LNPPRKAAL+ALA HA+EPS+ ERLK
Sbjct: 360 HTDKDDGTSLGGSLLPPFPGPCSLRTALARYADLLNPPRKAALLALATHASEPSD-ERLK 418

Query: 423 FLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF 482
           FLSSPQGKD+YS+WVV SQRSL+EVMAEFPSA PP+GVFFAA+AP LQPRYYSISSSPRF
Sbjct: 419 FLSSPQGKDEYSKWVVGSQRSLVEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRF 478

Query: 483 APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANP 542
           AP RVHVTCALVYGPTPTGRIHKGVCSTWMKNAIP E + DCS APIFIRPSNFKLP + 
Sbjct: 479 APQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPSEKSQDCSSAPIFIRPSNFKLPVDH 538

Query: 543 SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIF 593
           S+PIIMVGPGTGLAPFRGFLQER ALK+DG QLGPALLFFGCRNR+M  I+
Sbjct: 539 SIPIIMVGPGTGLAPFRGFLQERYALKEDGVQLGPALLFFGCRNRQMDFIY 589
This enzyme is required for electron transfer from NADP to cytochrome P450.
Vigna radiata var. radiata (taxid: 3916)
EC: 1EC: .EC: 6EC: .EC: 2EC: .EC: 4
>sp|Q9SB48|NCPR1_ARATH NADPH--cytochrome P450 reductase 1 OS=Arabidopsis thaliana GN=ATR1 PE=1 SV=1 Back     alignment and function description
>sp|Q05001|NCPR_CATRO NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1 Back     alignment and function description
>sp|Q9SUM3|NCPR2_ARATH NADPH--cytochrome P450 reductase 2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1 Back     alignment and function description
>sp|Q3SYT8|NCPR_BOVIN NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3 Back     alignment and function description
>sp|P37040|NCPR_MOUSE NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2 Back     alignment and function description
>sp|P04175|NCPR_PIG NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2 Back     alignment and function description
>sp|P37039|NCPR_CAVPO NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2 Back     alignment and function description
>sp|Q27597|NCPR_DROME NADPH--cytochrome P450 reductase OS=Drosophila melanogaster GN=Cpr PE=2 SV=2 Back     alignment and function description
>sp|P00388|NCPR_RAT NADPH--cytochrome P450 reductase OS=Rattus norvegicus GN=Por PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
224551850693 NADPH:cytochrome P450 reductase [Gossypi 0.983 0.849 0.832 0.0
356508035691 PREDICTED: NADPH--cytochrome P450 reduct 0.981 0.850 0.829 0.0
356515730691 PREDICTED: NADPH--cytochrome P450 reduct 0.979 0.849 0.822 0.0
255545978692 cytochrome P450, putative [Ricinus commu 0.979 0.848 0.811 0.0
194245141692 cytochrome P450 reductase-like protein [ 0.983 0.851 0.789 0.0
357465233692 NADPH cytochrome P450 reductase [Medicag 0.983 0.851 0.824 0.0
400532692 NADPH-ferrihemoprotein reductase [Vicia 0.983 0.851 0.800 0.0
351722725689 NADPH:P450 reductase [Glycine max] gi|27 0.976 0.849 0.790 0.0
224084556692 nadph-cytochrome P450 oxydoreductase [Po 0.986 0.854 0.787 0.0
476936690 NADPH-ferrihemoprotein reductase (EC 1.6 0.979 0.850 0.802 0.0
>gi|224551850|gb|ACN54323.1| NADPH:cytochrome P450 reductase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score = 1015 bits (2624), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/590 (83%), Positives = 536/590 (90%), Gaps = 1/590 (0%)

Query: 5   SGSDLVKFVESALGVSLGDSVTDTVILIATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVP 64
           S SDLV FVES LGVSL  SVTD++I+IATTS AV++GLLV  WKKS S+RS++VKP+V 
Sbjct: 3   SSSDLVGFVESVLGVSLEGSVTDSMIVIATTSLAVILGLLVFFWKKSGSERSRDVKPLVA 62

Query: 65  LKPLSAKDE-DDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD 123
            KP+S KDE DD+A IAAGKTKVT+FYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD
Sbjct: 63  PKPVSLKDEEDDDAVIAAGKTKVTIFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLD 122

Query: 124 DYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVF 183
           DYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGN+R PWLQQL +GVF
Sbjct: 123 DYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNERLPWLQQLTYGVF 182

Query: 184 GLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLL 243
           GLGNRQYEHFNKI  VLDE+L +QG  RL+ +GLGDDDQCIEDDFTAWREL+WPELDQLL
Sbjct: 183 GLGNRQYEHFNKIAKVLDEQLSEQGAKRLIEVGLGDDDQCIEDDFTAWRELLWPELDQLL 242

Query: 244 RDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRR 303
           RDEDD N  STPYTAAIPEYRV++H P V    +NYSN  NGNA++D+HHPCRVNVAV+R
Sbjct: 243 RDEDDENATSTPYTAAIPEYRVVVHDPAVMHVEENYSNKANGNATYDLHHPCRVNVAVQR 302

Query: 304 ELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLH 363
           ELHKP+SDRSCIHLEFD+SGTGITYETGDHVGVY +NC ETVEEA +LLGQ L+LLFS+H
Sbjct: 303 ELHKPESDRSCIHLEFDISGTGITYETGDHVGVYADNCVETVEEAARLLGQPLDLLFSIH 362

Query: 364 TDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKF 423
           TDNEDGT  GSSL PPF  PCTLR ALARYAD+LNPPRKAALIALAAHATEPSEAE+LKF
Sbjct: 363 TDNEDGTSAGSSLPPPFASPCTLRMALARYADLLNPPRKAALIALAAHATEPSEAEKLKF 422

Query: 424 LSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFA 483
           LSSPQGKD+YSQWVVASQRSLLEVMAEFPSA PP+GVFFAAVAP LQPRYYSISSSPRF 
Sbjct: 423 LSSPQGKDEYSQWVVASQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPRFV 482

Query: 484 PDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPS 543
           P RVHVTCALVYGPTPTGRIH+GVCSTWMKNA+PLE + DCSWAPIFIR SNFKLPA+PS
Sbjct: 483 PARVHVTCALVYGPTPTGRIHRGVCSTWMKNAVPLEKSNDCSWAPIFIRQSNFKLPADPS 542

Query: 544 VPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIF 593
           VPIIMVGPGTGLAPFRGFLQER+ LK+DGA+LG +LLFFGCRNRRM  I+
Sbjct: 543 VPIIMVGPGTGLAPFRGFLQERLVLKEDGAELGSSLLFFGCRNRRMDFIY 592

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356508035|ref|XP_003522768.1| PREDICTED: NADPH--cytochrome P450 reductase-like [Glycine max] Back     alignment and taxonomy information
>gi|356515730|ref|XP_003526551.1| PREDICTED: NADPH--cytochrome P450 reductase-like [Glycine max] Back     alignment and taxonomy information
>gi|255545978|ref|XP_002514049.1| cytochrome P450, putative [Ricinus communis] gi|223547135|gb|EEF48632.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|194245141|gb|ACF35281.1| cytochrome P450 reductase-like protein [Nothapodytes foetida] Back     alignment and taxonomy information
>gi|357465233|ref|XP_003602898.1| NADPH cytochrome P450 reductase [Medicago truncatula] gi|355491946|gb|AES73149.1| NADPH cytochrome P450 reductase [Medicago truncatula] Back     alignment and taxonomy information
>gi|400532|emb|CAA81211.1| NADPH-ferrihemoprotein reductase [Vicia sativa] Back     alignment and taxonomy information
>gi|351722725|ref|NP_001236742.1| NADPH:P450 reductase [Glycine max] gi|27261128|gb|AAN85869.1| NADPH:P450 reductase [Glycine max] Back     alignment and taxonomy information
>gi|224084556|ref|XP_002307336.1| nadph-cytochrome P450 oxydoreductase [Populus trichocarpa] gi|13183562|gb|AAK15259.1|AF302496_1 NADPH-cytochrome P450 oxydoreductase isoform 1 [Populus trichocarpa x Populus deltoides] gi|222856785|gb|EEE94332.1| nadph-cytochrome P450 oxydoreductase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|476936|pir||A47298 NADPH-ferrihemoprotein reductase (EC 1.6.2.4) - mung bean Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
TAIR|locus:2121894692 ATR1 "P450 reductase 1" [Arabi 0.973 0.842 0.702 1.9e-225
FB|FBgn0015623679 Cpr "Cytochrome P450 reductase 0.916 0.808 0.377 1e-93
MGI|MGI:97744678 Por "P450 (cytochrome) oxidore 0.904 0.799 0.363 1.5e-92
UNIPROTKB|F1P2T2679 POR "NADPH--cytochrome P450 re 0.858 0.756 0.375 1.3e-91
RGD|68335678 Por "P450 (cytochrome) oxidore 0.909 0.803 0.358 1.7e-91
UNIPROTKB|A5D9D3680 POR "NADPH--cytochrome P450 re 0.913 0.804 0.358 2.7e-91
UNIPROTKB|Q3SYT8678 POR "NADPH--cytochrome P450 re 0.913 0.806 0.358 2.7e-91
UNIPROTKB|P04175678 POR "NADPH--cytochrome P450 re 0.913 0.806 0.356 4.5e-91
UNIPROTKB|F1P7R1703 POR "NADPH--cytochrome P450 re 0.926 0.789 0.352 9.3e-91
ZFIN|ZDB-GENE-030131-5767676 zgc:63480 "zgc:63480" [Danio r 0.883 0.782 0.358 1.2e-90
TAIR|locus:2121894 ATR1 "P450 reductase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2176 (771.0 bits), Expect = 1.9e-225, P = 1.9e-225
 Identities = 413/588 (70%), Positives = 475/588 (80%)

Query:     7 SDLVKFVESALGVSLGDSVTDTVIL-IATTSFAVVIGLLVLVWKKSSSDRSKEVKPVVPL 65
             SDL K ++S +G    DS++D V+L IATTS A+V G +VL+WKK+++DRS E+KP++  
Sbjct:     8 SDLFKQLKSIMGT---DSLSDDVVLVIATTSLALVAGFVVLLWKKTTADRSGELKPLMIP 64

Query:    66 KPLSXXXXXXXXXXXXGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDY 125
             K L             GKT+V++F+GTQTGTAEGFAKAL+EEIKARYEKAAVKV+DLDDY
Sbjct:    65 KSLMAKDEDDDLDLGSGKTRVSIFFGTQTGTAEGFAKALSEEIKARYEKAAVKVIDLDDY 124

Query:   126 AMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGL 185
             A DD+QYEEKLKKETLAFF VATYGDGEPTDNAARFYKWFTE N+R   LQQL +GVF L
Sbjct:   125 AADDDQYEEKLKKETLAFFCVATYGDGEPTDNAARFYKWFTEENERDIKLQQLAYGVFAL 184

Query:   186 GNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRD 245
             GNRQYEHFNKIGIVLDEELCK+G  RL+ +GLGDDDQ IEDDF AW+E +W ELD+LL+D
Sbjct:   185 GNRQYEHFNKIGIVLDEELCKKGAKRLIEVGLGDDDQSIEDDFNAWKESLWSELDKLLKD 244

Query:   246 EDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRREL 305
             EDD  +V+TPYTA IPEYRV+ H P  T+     SN+ NGN + DIHHPCRV+VAV++EL
Sbjct:   245 EDD-KSVATPYTAVIPEYRVVTHDPRFTTQKSMESNVANGNTTIDIHHPCRVDVAVQKEL 303

Query:   306 HKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTD 365
             H  +SDRSCIHLEFD+S TGITYETGDHVGVY EN  E VEEAGK            H D
Sbjct:   304 HTHESDRSCIHLEFDISRTGITYETGDHVGVYAENHVEIVEEAGKLLGHSLDLVFSIHAD 363

Query:   366 NEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFLS 425
              EDG+P  S++ PPFPGPCTL T LARYAD+LNPPRK          TEPSEAE+LK L+
Sbjct:   364 KEDGSPLESAVPPPFPGPCTLGTGLARYADLLNPPRKSALVALAAYATEPSEAEKLKHLT 423

Query:   426 SPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPD 485
             SP GKD+YSQW+VASQRSLLEVMA FPSA PP+GVFFAA+AP LQPRYYSISSSPR AP 
Sbjct:   424 SPDGKDEYSQWIVASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRLAPS 483

Query:   486 RVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVP 545
             RVHVT ALVYGPTPTGRIHKGVCSTWMKNA+P E + +CS APIFIR SNFKLP+NPS P
Sbjct:   484 RVHVTSALVYGPTPTGRIHKGVCSTWMKNAVPAEKSHECSGAPIFIRASNFKLPSNPSTP 543

Query:   546 IIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIF 593
             I+MVGPGTGLAPFRGFLQERMALK+DG +LG +LLFFGCRNR+M  I+
Sbjct:   544 IVMVGPGTGLAPFRGFLQERMALKEDGEELGSSLLFFGCRNRQMDFIY 591
GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IEA;IDA
GO:0005506 "iron ion binding" evidence=IEA
GO:0010181 "FMN binding" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0009698 "phenylpropanoid metabolic process" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP
FB|FBgn0015623 Cpr "Cytochrome P450 reductase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:97744 Por "P450 (cytochrome) oxidoreductase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2T2 POR "NADPH--cytochrome P450 reductase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|68335 Por "P450 (cytochrome) oxidoreductase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A5D9D3 POR "NADPH--cytochrome P450 reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SYT8 POR "NADPH--cytochrome P450 reductase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P04175 POR "NADPH--cytochrome P450 reductase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7R1 POR "NADPH--cytochrome P450 reductase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5767 zgc:63480 "zgc:63480" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P00388NCPR_RAT1, ., 6, ., 2, ., 40.37190.90980.8038yesno
P04175NCPR_PIG1, ., 6, ., 2, ., 40.37410.91310.8067yesno
P16435NCPR_HUMAN1, ., 6, ., 2, ., 40.37410.90650.8020yesno
P37116NCPR_VIGRR1, ., 6, ., 2, ., 40.80030.97990.8507N/Ano
Q3SYT8NCPR_BOVIN1, ., 6, ., 2, ., 40.37240.91310.8067yesno
Q9SB48NCPR1_ARATH1, ., 6, ., 2, ., 40.73850.97490.8439yesno
P37039NCPR_CAVPO1, ., 6, ., 2, ., 40.37580.91310.8067yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.6.2.40.991
3rd Layer1.6.20.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.II.3276.1
annotation not avaliable (692 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.IX.3567.1
sulfite reductase (EC-1.8.7.1) (576 aa)
• •• •• 0.524
fgenesh4_pg.C_scaffold_2810000001
Predicted protein (369 aa)
 ••     0.480
gw1.I.1513.1
sulfite reductase (EC-1.8.7.1) (634 aa)
• •   • 0.469

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
cd06204416 cd06204, CYPOR, NADPH cytochrome p450 reductase (C 1e-151
pfam00667217 pfam00667, FAD_binding_1, FAD binding domain 1e-104
COG0369587 COG0369, CysJ, Sulfite reductase, alpha subunit (f 1e-97
cd06207382 cd06207, CyPoR_like, NADPH cytochrome p450 reducta 6e-80
cd06202406 cd06202, Nitric_oxide_synthase, The ferredoxin-red 1e-74
TIGR01931597 TIGR01931, cysJ, sulfite reductase [NADPH] flavopr 3e-70
cd06206384 cd06206, bifunctional_CYPOR, These bifunctional pr 2e-64
cd06199360 cd06199, SiR, Cytochrome p450- like alpha subunits 2e-60
cd06203398 cd06203, methionine_synthase_red, Human methionine 2e-56
PRK06214530 PRK06214, PRK06214, sulfite reductase; Provisional 2e-48
PRK10953600 PRK10953, cysJ, sulfite reductase subunit alpha; P 2e-44
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 1e-43
pfam00258142 pfam00258, Flavodoxin_1, Flavodoxin 9e-39
cd00322223 cd00322, FNR_like, Ferredoxin reductase (FNR), an 1e-16
cd06208286 cd06208, CYPOR_like_FNR, These ferredoxin reductas 3e-16
COG0716151 COG0716, FldA, Flavodoxins [Energy production and 9e-10
cd06201289 cd06201, SiR_like2, Cytochrome p450- like alpha su 2e-08
PRK08105149 PRK08105, PRK08105, flavodoxin; Provisional 3e-08
cd06200245 cd06200, SiR_like1, Cytochrome p450- like alpha su 3e-08
PLN03115367 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; 2e-07
PLN03116307 PLN03116, PLN03116, ferredoxin--NADP+ reductase; P 3e-07
pfam00175106 pfam00175, NAD_binding_1, Oxidoreductase NAD-bindi 3e-07
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 1e-06
PRK09267169 PRK09267, PRK09267, flavodoxin FldA; Validated 2e-06
TIGR03224411 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reduc 3e-05
TIGR01752167 TIGR01752, flav_long, flavodoxin, long chain 6e-05
PRK09004146 PRK09004, PRK09004, FMN-binding protein MioC; Prov 7e-05
cd06211238 cd06211, phenol_2-monooxygenase_like, Phenol 2-mon 1e-04
TIGR01753140 TIGR01753, flav_short, flavodoxin, short chain 9e-04
cd06216243 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur bi 0.002
cd06209228 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reduc 0.003
>gnl|CDD|99801 cd06204, CYPOR, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information 
 Score =  440 bits (1135), Expect = e-151
 Identities = 153/318 (48%), Positives = 197/318 (61%), Gaps = 25/318 (7%)

Query: 290 DIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAG 349
           D  +P    VAV REL    SDRSC+H+EFD+SG+GI Y+TGDH+ V+  N  E VE   
Sbjct: 1   DAKNPFLAPVAVSRELFTG-SDRSCLHIEFDISGSGIRYQTGDHLAVWPTNPSEEVERLL 59

Query: 350 KLLG-QSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIAL 408
           K+LG    + + SL + +E      +S   PFP P T RTAL  Y DI  P  +  L AL
Sbjct: 60  KVLGLDDRDTVISLKSLDEP-----ASKKVPFPCPTTYRTALRHYLDITAPVSRQVLAAL 114

Query: 409 AAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSA--TPPIGVFFAAVA 466
           A  A +P E ERL  L+S +GKD+Y++W+V   R+LLEV+ +FPSA  TPP   F   + 
Sbjct: 115 AQFAPDPEEKERLLKLAS-EGKDEYAKWIVEPHRNLLEVLQDFPSAKPTPPPFDFLIELL 173

Query: 467 PHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLE------- 519
           P LQPRYYSISSS +  P+R+H+T  +V  PTPTGRI KGV + W+    P         
Sbjct: 174 PRLQPRYYSISSSSKVHPNRIHITAVVVKYPTPTGRIIKGVATNWLLALKPALNGEKPPT 233

Query: 520 --------GNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQD 571
                     G  S  P+F+R SNF+LP  PS P+IM+GPGTG+APFRGF+QER ALK+ 
Sbjct: 234 PYYLSGPRKKGGGSKVPVFVRRSNFRLPTKPSTPVIMIGPGTGVAPFRGFIQERAALKES 293

Query: 572 GAQLGPALLFFGCRNRRM 589
           G ++GP LLFFGCR+   
Sbjct: 294 GKKVGPTLLFFGCRHPDE 311

CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. Length = 416
>gnl|CDD|216051 pfam00667, FAD_binding_1, FAD binding domain Back     alignment and domain information
>gnl|CDD|223446 COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99803 cd06207, CyPoR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99799 cd06202, Nitric_oxide_synthase, The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>gnl|CDD|233643 TIGR01931, cysJ, sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>gnl|CDD|99802 cd06206, bifunctional_CYPOR, These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>gnl|CDD|99796 cd06199, SiR, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99800 cd06203, methionine_synthase_red, Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>gnl|CDD|235745 PRK06214, PRK06214, sulfite reductase; Provisional Back     alignment and domain information
>gnl|CDD|182862 PRK10953, cysJ, sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|215823 pfam00258, Flavodoxin_1, Flavodoxin Back     alignment and domain information
>gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>gnl|CDD|99804 cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>gnl|CDD|223788 COG0716, FldA, Flavodoxins [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99798 cd06201, SiR_like2, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|181230 PRK08105, PRK08105, flavodoxin; Provisional Back     alignment and domain information
>gnl|CDD|99797 cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|215585 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>gnl|CDD|215586 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>gnl|CDD|215769 pfam00175, NAD_binding_1, Oxidoreductase NAD-binding domain Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|236439 PRK09267, PRK09267, flavodoxin FldA; Validated Back     alignment and domain information
>gnl|CDD|132268 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>gnl|CDD|233558 TIGR01752, flav_long, flavodoxin, long chain Back     alignment and domain information
>gnl|CDD|181608 PRK09004, PRK09004, FMN-binding protein MioC; Provisional Back     alignment and domain information
>gnl|CDD|99807 cd06211, phenol_2-monooxygenase_like, Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>gnl|CDD|233559 TIGR01753, flav_short, flavodoxin, short chain Back     alignment and domain information
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99805 cd06209, BenDO_FAD_NAD, Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 599
KOG1159574 consensus NADP-dependent flavoprotein reductase [E 100.0
KOG1158645 consensus NADP/FAD dependent oxidoreductase [Energ 100.0
PRK10953600 cysJ sulfite reductase subunit alpha; Provisional 100.0
TIGR01931597 cysJ sulfite reductase [NADPH] flavoprotein, alpha 100.0
COG0369587 CysJ Sulfite reductase, alpha subunit (flavoprotei 100.0
cd06204416 CYPOR NADPH cytochrome p450 reductase (CYPOR) serv 100.0
cd06207382 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
cd06203398 methionine_synthase_red Human methionine synthase 100.0
cd06202406 Nitric_oxide_synthase The ferredoxin-reductase (FN 100.0
cd06206384 bifunctional_CYPOR These bifunctional proteins fus 100.0
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 100.0
PRK06214530 sulfite reductase; Provisional 100.0
PF00667219 FAD_binding_1: FAD binding domain; InterPro: IPR00 100.0
PRK09004146 FMN-binding protein MioC; Provisional 100.0
PRK08105149 flavodoxin; Provisional 100.0
PRK05723151 flavodoxin; Provisional 100.0
PRK07308146 flavodoxin; Validated 99.94
PF00258143 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This 99.94
PLN03115367 ferredoxin--NADP(+) reductase; Provisional 99.94
PRK06703151 flavodoxin; Provisional 99.92
PRK12359172 flavodoxin FldB; Provisional 99.9
cd06182267 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) 99.89
TIGR03224411 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p 99.89
PRK06756148 flavodoxin; Provisional 99.89
PRK09271160 flavodoxin; Provisional 99.88
PRK11921394 metallo-beta-lactamase/flavodoxin domain-containin 99.88
PLN03116307 ferredoxin--NADP+ reductase; Provisional 99.87
TIGR01753140 flav_short flavodoxin, short chain. Flavodoxins ar 99.87
cd06201289 SiR_like2 Cytochrome p450- like alpha subunits of 99.86
TIGR01752167 flav_long flavodoxin, long chain. Flavodoxins are 99.85
PRK05452479 anaerobic nitric oxide reductase flavorubredoxin; 99.85
cd06208286 CYPOR_like_FNR These ferredoxin reductases are rel 99.85
TIGR01754140 flav_RNR ribonucleotide reductase-associated flavo 99.84
KOG1160601 consensus Fe-S oxidoreductase [Energy production a 99.83
COG0716151 FldA Flavodoxins [Energy production and conversion 99.82
PRK09267169 flavodoxin FldA; Validated 99.81
cd06200245 SiR_like1 Cytochrome p450- like alpha subunits of 99.8
COG0426388 FpaA Uncharacterized flavoproteins [Energy product 99.73
PRK10926248 ferredoxin-NADP reductase; Provisional 99.71
PRK13289399 bifunctional nitric oxide dioxygenase/dihydropteri 99.71
cd00322223 FNR_like Ferredoxin reductase (FNR), an FAD and NA 99.7
PRK05569141 flavodoxin; Provisional 99.7
cd06188283 NADH_quinone_reductase Na+-translocating NADH:quin 99.69
PRK05568142 flavodoxin; Provisional 99.69
cd06189224 flavin_oxioreductase NAD(P)H dependent flavin oxid 99.68
PRK07609339 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat 99.68
PRK05464409 Na(+)-translocating NADH-quinone reductase subunit 99.67
TIGR01941405 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo 99.67
PRK05713312 hypothetical protein; Provisional 99.67
PRK10684 332 HCP oxidoreductase, NADH-dependent; Provisional 99.67
COG1018 266 Hmp Flavodoxin reductases (ferredoxin-NADPH reduct 99.67
cd06211238 phenol_2-monooxygenase_like Phenol 2-monooxygenase 99.67
cd06197220 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin 99.66
PRK08051232 fre FMN reductase; Validated 99.66
PRK08221 263 anaerobic sulfite reductase subunit B; Provisional 99.66
cd06194222 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding 99.66
PRK08345 289 cytochrome-c3 hydrogenase subunit gamma; Provision 99.66
cd06187224 O2ase_reductase_like The oxygenase reductase FAD/N 99.65
cd06190232 T4MO_e_transfer_like Toluene-4-monoxygenase electr 99.65
PRK11872340 antC anthranilate dioxygenase reductase; Provision 99.65
cd06210236 MMO_FAD_NAD_binding Methane monooxygenase (MMO) re 99.65
TIGR02911 261 sulfite_red_B sulfite reductase, subunit B. Member 99.64
PTZ00274 325 cytochrome b5 reductase; Provisional 99.64
cd06209228 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD 99.64
cd06212232 monooxygenase_like The oxygenase reductase FAD/NAD 99.64
cd06191231 FNR_iron_sulfur_binding Iron-sulfur binding Ferred 99.64
cd06184247 flavohem_like_fad_nad_binding FAD_NAD(P)H binding 99.64
TIGR00333125 nrdI ribonucleoside-diphosphate reductase 2, opero 99.63
cd06218246 DHOD_e_trans FAD/NAD binding domain in the electro 99.63
cd06214241 PA_degradation_oxidoreductase_like NAD(P) binding 99.63
cd06215231 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr 99.63
cd06213227 oxygenase_e_transfer_subunit The oxygenase reducta 99.63
cd06216243 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr 99.62
cd06195241 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c 99.62
cd06198216 FNR_like_3 NAD(P) binding domain of ferredoxin red 99.62
cd06221 253 sulfite_reductase_like Anaerobic sulfite reductase 99.61
cd06196218 FNR_like_1 Ferredoxin reductase-like proteins cata 99.61
cd06185211 PDR_like Phthalate dioxygenase reductase (PDR) is 99.6
TIGR02160 352 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, 99.6
cd06220233 DHOD_e_trans_like2 FAD/NAD binding domain in the e 99.6
cd06183234 cyt_b5_reduct_like Cytochrome b5 reductase catalyz 99.59
PRK00054250 dihydroorotate dehydrogenase electron transfer sub 99.59
PTZ00319300 NADH-cytochrome B5 reductase; Provisional 99.57
cd06192243 DHOD_e_trans_like FAD/NAD binding domain (electron 99.57
cd06217235 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr 99.57
COG0543252 UbiB 2-polyprenylphenol hydroxylase and related fl 99.52
PRK02551154 flavoprotein NrdI; Provisional 99.51
PRK06222 281 ferredoxin-NADP(+) reductase subunit alpha; Review 99.51
PRK03600134 nrdI ribonucleotide reductase stimulatory protein; 99.51
cd06219 248 DHOD_e_trans_like1 FAD/NAD binding domain in the e 99.5
PRK05802320 hypothetical protein; Provisional 99.49
PRK06242150 flavodoxin; Provisional 99.46
KOG0534286 consensus NADH-cytochrome b-5 reductase [Coenzyme 99.46
cd06186210 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz 99.44
PLN02252888 nitrate reductase [NADPH] 99.44
COG2871410 NqrF Na+-transporting NADH:ubiquinone oxidoreducta 99.36
cd06193235 siderophore_interacting Siderophore interacting pr 99.33
PRK03767200 NAD(P)H:quinone oxidoreductase; Provisional 99.33
TIGR01755197 flav_wrbA NAD(P)H:quinone oxidoreductase, type IV. 99.33
PTZ003061167 NADH-dependent fumarate reductase; Provisional 99.31
PRK11104177 hemG protoporphyrinogen oxidase; Provisional 99.3
PRK12778 752 putative bifunctional 2-polyprenylphenol hydroxyla 99.28
COG4097438 Predicted ferric reductase [Inorganic ion transpor 99.26
PLN02631 699 ferric-chelate reductase 99.22
PLN02292 702 ferric-chelate reductase 99.13
PRK12779 944 putative bifunctional glutamate synthase subunit b 99.12
PLN02844 722 oxidoreductase/ferric-chelate reductase 99.08
PRK07116160 flavodoxin; Provisional 99.07
PF12724143 Flavodoxin_5: Flavodoxin domain 99.04
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.02
PF07972122 Flavodoxin_NdrI: NrdI Flavodoxin like ; InterPro: 98.96
PF03358152 FMN_red: NADPH-dependent FMN reductase; InterPro: 98.88
PF00175109 NAD_binding_1: Oxidoreductase NAD-binding domain ; 98.86
COG1780141 NrdI Protein involved in ribonucleotide reduction 98.85
PF12641160 Flavodoxin_3: Flavodoxin domain 98.72
COG4635175 HemG Flavodoxin [Energy production and conversion 98.65
PF12682156 Flavodoxin_4: Flavodoxin; PDB: 3EDO_B 3KLB_A. 98.48
PRK10569191 NAD(P)H-dependent FMN reductase; Provisional 98.42
TIGR03567171 FMN_reduc_SsuE FMN reductase, SsuE family. Members 98.3
PRK00170201 azoreductase; Reviewed 98.23
KOG3378385 consensus Globins and related hemoproteins [Energy 98.21
PRK09739199 hypothetical protein; Provisional 98.15
PRK01355199 azoreductase; Reviewed 98.13
TIGR03566174 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Memb 98.11
PRK06934221 flavodoxin; Provisional 98.07
PF02525199 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR0 98.06
PRK13556208 azoreductase; Provisional 97.96
COG0655207 WrbA Multimeric flavodoxin WrbA [General function 97.9
PF0097099 FAD_binding_6: Oxidoreductase FAD-binding domain; 97.7
PRK065671028 putative bifunctional glutamate synthase subunit b 97.55
TIGR02690219 resist_ArsH arsenical resistance protein ArsH. Mem 97.35
PF08030156 NAD_binding_6: Ferric reductase NAD binding domain 97.16
PRK04930184 glutathione-regulated potassium-efflux system anci 97.16
PRK13555208 azoreductase; Provisional 97.13
KOG0039 646 consensus Ferric reductase, NADH/NADPH oxidase and 96.78
KOG3135203 consensus 1,4-benzoquinone reductase-like; Trp rep 96.54
COG0431184 Predicted flavoprotein [General function predictio 95.76
PRK00871176 glutathione-regulated potassium-efflux system anci 95.42
COG2249189 MdaB Putative NADPH-quinone reductase (modulator o 92.96
PRK02261137 methylaspartate mutase subunit S; Provisional 91.63
TIGR01501134 MthylAspMutase methylaspartate mutase, S subunit. 89.91
COG2375265 ViuB Siderophore-interacting protein [Inorganic io 87.39
cd02072128 Glm_B12_BD B12 binding domain of glutamate mutase 85.79
PF08021117 FAD_binding_9: Siderophore-interacting FAD-binding 85.34
TIGR00640132 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal 81.2
KOG0560 638 consensus Sulfite reductase (ferredoxin) [Inorgani 81.12
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-99  Score=790.52  Aligned_cols=480  Identities=31%  Similarity=0.524  Sum_probs=421.3

Q ss_pred             CeEEEEEECCCchHHHHHHHHHHHHHhhhCCCeEEEEeCCCCCCCchHHHhhhccCCeEEEEeecCCCCCCChhHHHHHH
Q 007547           84 TKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYK  163 (599)
Q Consensus        84 ~~v~I~YgSqtGtte~~A~~la~~l~~~~~g~~v~v~dl~d~~~~~~~~~~~l~~~~~vif~~sTyG~G~~p~na~~F~~  163 (599)
                      ++++|+||||||||+++|+.|.+++..+  |..+.|+.||+||.++      |.+.+++||+|||+|+|++|+||..||.
T Consensus         1 ~~i~ILYGSqTGtA~dvAe~l~Re~~r~--~~~~~V~s~Deyd~~~------ll~~~~vvFVcSTTGqGe~P~Nmk~~Wr   72 (574)
T KOG1159|consen    1 MKILILYGSQTGTAQDVAESLGREAHRR--GLQCLVMSMDEYDVEK------LLDERLVVFVCSTTGQGEEPDNMKKFWR   72 (574)
T ss_pred             CceEEEeecCcccHHHHHHHHHHHHHhc--cCCceEeeccccCHhH------hccCceEEEEEecCCCCCCCccHHHHHH
Confidence            5799999999999999999999999988  8889999999999988      9999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCcEEEEEeecCcchhHHHHHHHHHHHHHHHCCCeEEecceeecCCC--CcHHHHHHHHHHHHHHHHH
Q 007547          164 WFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQ--CIEDDFTAWRELVWPELDQ  241 (599)
Q Consensus       164 ~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~i~~~g~~D~~~--~~e~~~~~W~~~l~~~L~~  241 (599)
                      +|...+....+|++++|||||||||+|+.||.++|+++++|.+|||+.++++|+|||++  +.+..|..|..++|..|..
T Consensus        73 fL~rknLps~~L~~~~~AvlGLGDSsY~KfNy~aKKL~~RL~qLGA~~~~~~glgDdQh~~G~eg~~~pW~~~lw~~L~~  152 (574)
T KOG1159|consen   73 FLLRKNLPSTILQHMQFAVLGLGDSSYPKFNYAAKKLHRRLRQLGANSVCPRGLGDDQHEEGIEGVFDPWLKELWSYLKG  152 (574)
T ss_pred             HHhhccchHHHHhhhhheeeecCcccchhhhHHHHHHHHHHHHhCcccccccccccccccccchhhhHHHHHHHHHHHHh
Confidence            99988777789999999999999999999999999999999999999999999999998  7999999999999999998


Q ss_pred             hccCCCCCCCCCCCCcccCCceEEEEcCCcccccCCCCCCCCCCCCCCCCCCCeeEEEEEeeeecCCCCCCceEEEEEEe
Q 007547          242 LLRDEDDANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDV  321 (599)
Q Consensus       242 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hle~di  321 (599)
                      +....... ....|....+..|++-.+... ....+... +..+    ..+-|  ++++.|++||+.+|+++++|++|+|
T Consensus       153 i~~p~~~~-t~l~~~~~~~~k~~~l~~~~~-~~~~d~~~-v~~~----~~~~~--~k~~~N~rlT~~~HfQDVR~~~F~i  223 (574)
T KOG1159|consen  153 IYPPYRPE-TDLIPTVQITTKYSLLELGKA-SDFSDSDI-VLEP----QGQIP--AKLVENRRLTSADHFQDVRLFEFDI  223 (574)
T ss_pred             hcCCCCCc-ccCCCcccccchhhhhhcccc-ccCCcchh-hhcc----ccccc--cchhcceeecCcchhheeeEEEEec
Confidence            76521110 000121223334444332211 11111100 0001    11222  8999999999999999999999999


Q ss_pred             cCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEecCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccCCCcc
Q 007547          322 SGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPR  401 (599)
Q Consensus       322 ~~~~l~Y~~GD~l~V~p~N~~~~V~~~l~~lgl~~d~~~~l~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~y~Dl~~~p~  401 (599)
                      .++...|+|||.+.|+|.|+++.|++|++.+||++++...+.....+..    +...-+|.|+|+++++++|+|+++.|+
T Consensus       224 ~~s~~~~epGDvl~l~P~N~de~V~~Fie~~gl~~~~~~~l~~~s~~~~----~~~~~~~~p~sl~~~lk~~~D~~SvPr  299 (574)
T KOG1159|consen  224 PDSYEEFEPGDVLSLLPSNSDETVQRFIEYLGLDEDQLKPLKISSNDRS----SPLPLLPNPLSLLNLLKYVLDFNSVPR  299 (574)
T ss_pred             CCccccccCCCEEEEecCCchHHHHHHHHHcCCChhhccccccccCccc----ccccccCCchhHHHHHHHhcccccCcc
Confidence            9999999999999999999999999999999999987766665554322    222248999999999999999999999


Q ss_pred             HHHHHHHHhhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCCCceeecCCCCC
Q 007547          402 KAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPR  481 (599)
Q Consensus       402 k~~l~~La~~a~d~~ek~~L~~l~s~~g~~~y~~~~~~~~~sl~dvL~~fps~~~p~~~ll~~l~p~l~pR~YSIsSsp~  481 (599)
                      |+||..|++|++|+.||+||++++|++|.++|++|+.+++||++|||++|+|.++|++++++++ |.|+||+|||||+|.
T Consensus       300 rsFFe~l~~~s~~~~EkEkL~efas~qg~ddl~dY~nRpRRtilEvLeDF~sv~lp~~yl~d~~-P~IrPR~fSIas~~~  378 (574)
T KOG1159|consen  300 RSFFEMLAHFSTDEMEKEKLQEFASAQGIDDLYDYVNRPRRTILEVLEDFRSVKLPIDYLLDLL-PVIRPRAFSIASSPG  378 (574)
T ss_pred             hHHHHHHHHHccChHHHHHHHHhccccchHHHHHHhcchhhhHHHHHHhchhccCCHHHHHHhc-cccccceeeeccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999998


Q ss_pred             CCCCEEEEEEEEEEecCCCCCcccCchhHHHhhcCCCCCCCCceEEEEEeeCCCCcCCCCCCCcEEEEeCCCChHHHHHH
Q 007547          482 FAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGF  561 (599)
Q Consensus       482 ~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~~~~F~Lp~~~~~piImIg~GTGIAPfrsf  561 (599)
                      .+  .++|+|++|+|++.-.++|+|+||+||++|++|      +.+++.+++|++.+|.+.++|+||||||||||||||+
T Consensus       379 ~~--~leL~VAiV~ykT~l~~pRrGlCS~wl~sL~~g------~~i~~~v~~g~l~~p~~~~~PlImVGPGTGvAPfRa~  450 (574)
T KOG1159|consen  379 AH--HLELLVAIVEYKTILKEPRRGLCSNWLASLKPG------DEIPIKVRPGTLYFPSDLNKPLIMVGPGTGVAPFRAL  450 (574)
T ss_pred             CC--ceeEEEEEEEEeeeccccccchhHHHHhhcCCC------CeEEEEEecCccccCCCCCCCeEEEcCCCCcccHHHH
Confidence            64  499999999999999999999999999999999      8999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCEEEEEeccCCCcccchHHhhc
Q 007547          562 LQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQ  598 (599)
Q Consensus       562 lqer~~~~~~g~~~g~~~Lf~G~R~~~~D~ly~~El~  598 (599)
                      +|||+.+     ...+..||||||++++||+|++||+
T Consensus       451 i~er~~q-----~~~~~~lFfGCR~K~~Df~y~~eW~  482 (574)
T KOG1159|consen  451 IQERIYQ-----GDKENVLFFGCRNKDKDFLYEDEWT  482 (574)
T ss_pred             HHHHHhh-----ccCCceEEEecccCCccccccchhh
Confidence            9999973     2355699999999999999999996

>KOG1158 consensus NADP/FAD dependent oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>PRK06214 sulfite reductase; Provisional Back     alignment and domain information
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase Back     alignment and domain information
>PRK09004 FMN-binding protein MioC; Provisional Back     alignment and domain information
>PRK08105 flavodoxin; Provisional Back     alignment and domain information
>PRK05723 flavodoxin; Provisional Back     alignment and domain information
>PRK07308 flavodoxin; Validated Back     alignment and domain information
>PF00258 Flavodoxin_1: Flavodoxin; InterPro: IPR008254 This domain is found in a number of proteins including flavodoxin and nitric-oxide synthase Back     alignment and domain information
>PLN03115 ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>PRK06703 flavodoxin; Provisional Back     alignment and domain information
>PRK12359 flavodoxin FldB; Provisional Back     alignment and domain information
>cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>PRK06756 flavodoxin; Provisional Back     alignment and domain information
>PRK09271 flavodoxin; Provisional Back     alignment and domain information
>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional Back     alignment and domain information
>PLN03116 ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>TIGR01753 flav_short flavodoxin, short chain Back     alignment and domain information
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>TIGR01752 flav_long flavodoxin, long chain Back     alignment and domain information
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional Back     alignment and domain information
>cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative Back     alignment and domain information
>KOG1160 consensus Fe-S oxidoreductase [Energy production and conversion] Back     alignment and domain information
>COG0716 FldA Flavodoxins [Energy production and conversion] Back     alignment and domain information
>PRK09267 flavodoxin FldA; Validated Back     alignment and domain information
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PRK10926 ferredoxin-NADP reductase; Provisional Back     alignment and domain information
>PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>PRK05569 flavodoxin; Provisional Back     alignment and domain information
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>PRK05568 flavodoxin; Provisional Back     alignment and domain information
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>PRK05713 hypothetical protein; Provisional Back     alignment and domain information
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information
>COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>PRK08051 fre FMN reductase; Validated Back     alignment and domain information
>PRK08221 anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>PRK11872 antC anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>TIGR02911 sulfite_red_B sulfite reductase, subunit B Back     alignment and domain information
>PTZ00274 cytochrome b5 reductase; Provisional Back     alignment and domain information
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>TIGR00333 nrdI ribonucleoside-diphosphate reductase 2, operon protein nrdI Back     alignment and domain information
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>PTZ00319 NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK02551 flavoprotein NrdI; Provisional Back     alignment and domain information
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed Back     alignment and domain information
>PRK03600 nrdI ribonucleotide reductase stimulatory protein; Reviewed Back     alignment and domain information
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>PRK05802 hypothetical protein; Provisional Back     alignment and domain information
>PRK06242 flavodoxin; Provisional Back     alignment and domain information
>KOG0534 consensus NADH-cytochrome b-5 reductase [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family Back     alignment and domain information
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional Back     alignment and domain information
>TIGR01755 flav_wrbA NAD(P)H:quinone oxidoreductase, type IV Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PRK11104 hemG protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02631 ferric-chelate reductase Back     alignment and domain information
>PLN02292 ferric-chelate reductase Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PLN02844 oxidoreductase/ferric-chelate reductase Back     alignment and domain information
>PRK07116 flavodoxin; Provisional Back     alignment and domain information
>PF12724 Flavodoxin_5: Flavodoxin domain Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PF07972 Flavodoxin_NdrI: NrdI Flavodoxin like ; InterPro: IPR004465 Ribonucleotide reductases (RNRs) are enzymes that provide the precursors of DNA synthesis Back     alignment and domain information
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1 Back     alignment and domain information
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes Back     alignment and domain information
>COG1780 NrdI Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism] Back     alignment and domain information
>PF12641 Flavodoxin_3: Flavodoxin domain Back     alignment and domain information
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism] Back     alignment and domain information
>PF12682 Flavodoxin_4: Flavodoxin; PDB: 3EDO_B 3KLB_A Back     alignment and domain information
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional Back     alignment and domain information
>TIGR03567 FMN_reduc_SsuE FMN reductase, SsuE family Back     alignment and domain information
>PRK00170 azoreductase; Reviewed Back     alignment and domain information
>KOG3378 consensus Globins and related hemoproteins [Energy production and conversion] Back     alignment and domain information
>PRK09739 hypothetical protein; Provisional Back     alignment and domain information
>PRK01355 azoreductase; Reviewed Back     alignment and domain information
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily Back     alignment and domain information
>PRK06934 flavodoxin; Provisional Back     alignment and domain information
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold Back     alignment and domain information
>PRK13556 azoreductase; Provisional Back     alignment and domain information
>COG0655 WrbA Multimeric flavodoxin WrbA [General function prediction only] Back     alignment and domain information
>PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>TIGR02690 resist_ArsH arsenical resistance protein ArsH Back     alignment and domain information
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins Back     alignment and domain information
>PRK04930 glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional Back     alignment and domain information
>PRK13555 azoreductase; Provisional Back     alignment and domain information
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG3135 consensus 1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein [General function prediction only] Back     alignment and domain information
>COG0431 Predicted flavoprotein [General function prediction only] Back     alignment and domain information
>PRK00871 glutathione-regulated potassium-efflux system ancillary protein KefF; Provisional Back     alignment and domain information
>COG2249 MdaB Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only] Back     alignment and domain information
>PRK02261 methylaspartate mutase subunit S; Provisional Back     alignment and domain information
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit Back     alignment and domain information
>COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm) Back     alignment and domain information
>PF08021 FAD_binding_9: Siderophore-interacting FAD-binding domain; InterPro: IPR013113 Proteins in this entry are siderophore-interacting FAD-binding proteins Back     alignment and domain information
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain Back     alignment and domain information
>KOG0560 consensus Sulfite reductase (ferredoxin) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
1j9z_A622 Cypor-W677g Length = 622 2e-96
1amo_A615 Three-Dimensional Structure Of Nadph-Cytochrome P45 2e-96
1ja0_A620 Cypor-W677x Length = 620 2e-96
1ja1_A622 Cypor-Triple Mutant Length = 622 3e-96
3es9_A618 Nadph-Cytochrome P450 Reductase In An Open Conforma 7e-96
3ojx_A622 Disulfide Crosslinked Cytochrome P450 Reductase Ina 2e-94
3qfr_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 2e-94
3qe2_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 2e-94
3qfc_A618 Crystal Structure Of Human Nadph-Cytochrome P450 (V 1e-93
3fjo_A637 Structure Of Chimeric Yh Cpr Length = 637 8e-81
3qfs_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 6e-61
3qft_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 3e-60
2bpo_A682 Crystal Structure Of The Yeast Cpr Triple Mutant: D 2e-54
1tll_A 688 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 8e-54
2bf4_A682 A Second Fmn-Binding Site In Yeast Nadph-Cytochrome 2e-52
1f20_A435 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 5e-37
2qtz_A 539 Crystal Structure Of The Nadp+-Bound Fad-Containing 8e-34
4dqk_A391 Crystal Structure Of The Fad Binding Domain Of Cyto 9e-34
4dql_A393 Crystal Structure Of The Fad Binding Domain Of Cyto 3e-33
2qtl_A 539 Crystal Structure Of The Fad-Containing Fnr-Like Mo 2e-32
1b1c_A181 Crystal Structure Of The Fmn-Binding Domain Of Huma 3e-28
1ddg_A374 Crystal Structure Of Sir-Fp60 Length = 374 8e-17
1ykg_A167 Solution Structure Of The Flavodoxin-Like Domain Fr 2e-11
1bvy_F191 Complex Of The Heme And Fmn-Binding Domains Of The 2e-11
3hr4_A219 Human Inos Reductase And Calmodulin Complex Length 2e-10
3mhp_A296 Fnr-Recruitment To The Thylakoid Length = 296 2e-07
1qg0_A308 Wild-type Pea Fnr Length = 308 2e-07
4af7_A308 Pea Fnr C266m Mutant Length = 308 2e-07
4af6_A308 Pea Fnr L268v Mutant Length = 308 2e-07
1qfy_A308 Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 2e-07
1qga_A308 Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 2e-07
1gaq_A314 Crystal Structure Of The Complex Between Ferredoxin 3e-07
1sm4_A296 Crystal Structure Analysis Of The Ferredoxin-Nadp+ 8e-07
3vo1_A314 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 4e-06
1fnb_A314 Refined Crystal Structure Of Spinach Ferredoxin Red 5e-06
1bx0_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 5e-06
3vo2_A310 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 5e-06
1frq_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 5e-06
1bx1_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 5e-06
1frn_A314 The Involvement Of Ser96 In The Catalytic Mechanism 2e-05
2xnc_A315 Crystal Structure Of An Engineered Ferredoxin Nadp 2e-05
2hna_A147 Solution Structure Of A Bacterial Apo-Flavodoxin Le 1e-04
2b5o_A402 Ferredoxin-nadp Reductase Length = 402 3e-04
>pdb|1J9Z|A Chain A, Cypor-W677g Length = 622 Back     alignment and structure 
Iteration: 1

 Score =  350 bits (897), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 194/507 (38%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 86  VTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLKKETLAFFM 145
           + VFYG+QTGTAE FA  L+++   RY    +   D ++Y + D     ++ K +L  F 
Sbjct: 24  IIVFYGSQTGTAEEFANRLSKDAH-RYGMRGMSA-DPEEYDLADLSSLPEIDK-SLVVFC 80
Query: 146 VATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELC 205
           +ATYG+G+PTDNA  FY W  E +     L  +KF VFGLGN+ YEHFN +G  +D+ L 
Sbjct: 81  MATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLE 137
Query: 206 KQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRV 265
           + G  R+  LGLGDDD  +E+DF  WRE  WP + +    E      +T   ++I +Y +
Sbjct: 138 QLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE------ATGEESSIRQYEL 191
Query: 266 MIH-----GPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFD 320
           ++H         T  +    +  N    FD  +P    V   R+L++  ++R  +HLE D
Sbjct: 192 VVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELD 250
Query: 321 VSGTGITYETGDHVGVYVENCDETVEEAGKXXXXXXXXXXXXHTDNEDGTPRGSSLTPPF 380
           +S + I YE+GDHV VY  N    V + G+            +  +E+     S+   PF
Sbjct: 251 ISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE-----SNKKHPF 305
Query: 381 PGPCTLRTALARYADILNPPRKXXXXXXXXXXTEPSEAERLKFL--SSPQGKDDYSQWVV 438
           P P T RTAL  Y DI NPPR           +EPSE E L  +  SS +GK+ Y  WVV
Sbjct: 306 PCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVV 365
Query: 439 ASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPT 498
            ++R +L ++ ++PS  PPI      + P LQ RYYSI+SS +  P+ VH+    V    
Sbjct: 366 EARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEA 424
Query: 499 PTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPF 558
            +GR++KGV ++W++   P   NG  +  P+F+R S F+LP   + P+IMVGPGTG+APF
Sbjct: 425 KSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPF 484
Query: 559 RGFLQERMALKQDGAQLGPALLFFGCR 585
            GF+QER  L++ G ++G  LL++GCR
Sbjct: 485 MGFIQERAWLREQGKEVGETLLYYGCR 511
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450 Reductase: Prototype For Fmn-And Fad-Containing Enzymes Length = 615 Back     alignment and structure
>pdb|1JA0|A Chain A, Cypor-W677x Length = 620 Back     alignment and structure
>pdb|1JA1|A Chain A, Cypor-Triple Mutant Length = 622 Back     alignment and structure
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation Length = 618 Back     alignment and structure
>pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive Length = 622 Back     alignment and structure
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase (R457h Mutant) Length = 618 Back     alignment and structure
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase Length = 618 Back     alignment and structure
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e Mutant) Length = 618 Back     alignment and structure
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr Length = 637 Back     alignment and structure
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH Domain) Length = 458 Back     alignment and structure
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH DOMAIN And R457h Mutant) Length = 458 Back     alignment and structure
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g, Y75f, K78a. Length = 682 Back     alignment and structure
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase Reductase Module At 2.3 A Resolution. Length = 688 Back     alignment and structure
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450 Reductase Suggests A Novel Mechanism Of Electron Transfer By Diflavin Reductases. Length = 682 Back     alignment and structure
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase FadNADP+ Domain At 1.9a Resolution Length = 435 Back     alignment and structure
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 Length = 391 Back     alignment and structure
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 In Complex With Nadp+ Length = 393 Back     alignment and structure
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human Cytochrome P450 Reductase At 1.93a Resolution Length = 181 Back     alignment and structure
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60 Length = 374 Back     alignment and structure
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The Escherichia Coli Sulfite Reductase Length = 167 Back     alignment and structure
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 191 Back     alignment and structure
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex Length = 219 Back     alignment and structure
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid Length = 296 Back     alignment and structure
>pdb|1QG0|A Chain A, Wild-type Pea Fnr Length = 308 Back     alignment and structure
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant Length = 308 Back     alignment and structure
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant Length = 308 Back     alignment and structure
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And Ferredoxin-Nadp+ Reductase Length = 314 Back     alignment and structure
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+ Reductase From Paprika Length = 296 Back     alignment and structure
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Ii Length = 314 Back     alignment and structure
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'- Phospho-5'-Amp Bound States Length = 314 Back     alignment and structure
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312l Length = 314 Back     alignment and structure
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Iii Length = 310 Back     alignment and structure
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312a Length = 314 Back     alignment and structure
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312q Length = 314 Back     alignment and structure
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of Ferredoxin-Nadp+ Reductase: Structure-Function Relationship As Studied By Site-Directed Mutagenesis And X- Ray Crystallography Length = 314 Back     alignment and structure
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp Reductase (Fnr) From Pisum Sativum Length = 315 Back     alignment and structure
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin Length = 147 Back     alignment and structure
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase Length = 402 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 0.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 0.0
1tll_A 688 Nitric-oxide synthase, brain; reductase module, FM 0.0
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 1e-156
2qtl_A 539 MSR;, methionine synthase reductase; alpha-beta-al 1e-151
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 1e-132
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 1e-130
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 1e-114
3hr4_A219 Nitric oxide synthase, inducible; inducible nitric 2e-65
1bvy_F191 Protein (cytochrome P450 BM-3); fatty acid monooxy 7e-62
1ykg_A167 SIR-FP, sulfite reductase [NADPH] flavoprotein alp 1e-60
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 2e-55
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 3e-54
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 3e-54
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 1e-53
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 2e-50
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 1e-04
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 3e-50
2hna_A147 Protein MIOC, flavodoxin; alpha-beta sandwich, fla 3e-49
1f4p_A147 Flavodoxin; electron transport, flavoprotein, FMN, 2e-33
2fcr_A173 Flavodoxin; electron transport; HET: FMN; 1.80A {C 5e-27
2wc1_A182 Flavodoxin; electron transport, flavoprotein; HET: 7e-26
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 4e-25
1yob_A179 Flavodoxin 2, flavodoxin II; alpha-beta fold, non- 5e-21
1ag9_A175 Flavodoxin; electron transport, reductive activati 3e-19
1czn_A169 Flavodoxin; FMN binding, redox potential, electron 3e-18
2bmv_A164 Flavodoxin; electron transport, flavoprotein, FMN, 1e-17
1obo_A169 Flavodoxin; electron transfer, flavoprotein, elect 3e-17
2fz5_A137 Flavodoxin; alpha/beta doubly-wound topology, non- 3e-08
1tvc_A250 Methane monooxygenase component C, methane monooxy 5e-07
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 1e-06
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 4e-06
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 2e-05
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 3e-05
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
5nul_A138 Flavodoxin; electron transport, flavoprotein, FMN; 6e-05
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Length = 618 Back     alignment and structure
 Score =  623 bits (1608), Expect = 0.0
 Identities = 196/523 (37%), Positives = 287/523 (54%), Gaps = 16/523 (3%)

Query: 69  SAKDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMD 128
             ++      +      + VFYG+QTGTAE FA  L+++      +      D ++Y + 
Sbjct: 4   MVRESSFVEKMKKTGRNIIVFYGSQTGTAEEFANRLSKDAHRYGMR--GMSADPEEYDLA 61

Query: 129 DEQYEEKLKKETLAFFMVATYGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNR 188
           D     ++    L  F +ATYG+G+PTDNA  FY W  E +     L  +KF VFGLGN+
Sbjct: 62  DLSSLPEID-NALVVFCMATYGEGDPTDNAQDFYDWLQETD---VDLSGVKFAVFGLGNK 117

Query: 189 QYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDFTAWRELVWPELDQLLRDEDD 248
            YEHFN +G  +D+ L + G  R+  LGLGDDD  +E+DF  WRE  W  + +    E  
Sbjct: 118 TYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWLAVCEHFGVEAT 177

Query: 249 ANTVSTPYTAAIPEYRVMIHGPTVTSSVDNYSNMPNGNASFDIHHPCRVNVAVRRELHKP 308
               S      +  +  +         +    +  N    FD  +P    V   R+L++ 
Sbjct: 178 GEESSIR-QYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQG 236

Query: 309 DSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNED 368
            ++R  +HLE D+S + I YE+GDHV VY  N    V + GK+LG  L+++ SL+  +E+
Sbjct: 237 -TERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE 295

Query: 369 GTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSP- 427
              +      PFP P + RTAL  Y DI NPPR   L  LA +A+EPSE E L+ ++S  
Sbjct: 296 SNKK-----HPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSS 350

Query: 428 -QGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDR 486
            +GK+ Y  WVV ++R +L ++ + PS  PPI      + P LQ RYYSI+SS +  P+ 
Sbjct: 351 GEGKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNS 409

Query: 487 VHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPI 546
           VH+   +V   T  GRI+KGV + W++   P+  NG  +  P+F+R S F+LP   + P+
Sbjct: 410 VHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPV 469

Query: 547 IMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRM 589
           IMVGPGTG+APF GF+QER  L+Q G ++G  LL++GCR    
Sbjct: 470 IMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDE 512
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Length = 682 Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Length = 688 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Length = 458 Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Length = 539 Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Length = 435 Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Length = 393 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Length = 374 Back     alignment and structure
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, alternative splicing, calcium, calmodulin-binding, FAD, FMN, heme, iron, metal-binding; HET: FMN; 2.50A {Homo sapiens} Length = 219 Back     alignment and structure
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1 Length = 191 Back     alignment and structure
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2 Length = 167 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Length = 314 Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Length = 316 Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Length = 304 Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Length = 311 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Length = 314 Back     alignment and structure
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A Length = 147 Back     alignment and structure
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ... Length = 147 Back     alignment and structure
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1 Length = 173 Back     alignment and structure
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus} Length = 182 Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Length = 148 Back     alignment and structure
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1 Length = 179 Back     alignment and structure
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A* Length = 175 Back     alignment and structure
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A* Length = 169 Back     alignment and structure
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A* Length = 164 Back     alignment and structure
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A* Length = 169 Back     alignment and structure
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1 Length = 137 Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Length = 250 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Length = 159 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A* Length = 138 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 100.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 100.0
1tll_A 688 Nitric-oxide synthase, brain; reductase module, FM 100.0
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 100.0
2qtl_A 539 MSR;, methionine synthase reductase; alpha-beta-al 100.0
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 100.0
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 100.0
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 100.0
3hr4_A219 Nitric oxide synthase, inducible; inducible nitric 100.0
1bvy_F191 Protein (cytochrome P450 BM-3); fatty acid monooxy 99.95
1ykg_A167 SIR-FP, sulfite reductase [NADPH] flavoprotein alp 99.95
2hna_A147 Protein MIOC, flavodoxin; alpha-beta sandwich, fla 99.94
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 99.93
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 99.91
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 99.91
1f4p_A147 Flavodoxin; electron transport, flavoprotein, FMN, 99.9
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 99.9
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 99.89
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 99.88
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 99.87
2wc1_A182 Flavodoxin; electron transport, flavoprotein; HET: 99.86
1yob_A179 Flavodoxin 2, flavodoxin II; alpha-beta fold, non- 99.86
2fcr_A173 Flavodoxin; electron transport; HET: FMN; 1.80A {C 99.86
2bmv_A164 Flavodoxin; electron transport, flavoprotein, FMN, 99.86
1ag9_A175 Flavodoxin; electron transport, reductive activati 99.85
1obo_A169 Flavodoxin; electron transfer, flavoprotein, elect 99.85
1czn_A169 Flavodoxin; FMN binding, redox potential, electron 99.84
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 99.83
5nul_A138 Flavodoxin; electron transport, flavoprotein, FMN; 99.82
4dik_A410 Flavoprotein; TM0755, electron transport, DI-iron 99.82
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 99.8
3hly_A161 Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein 99.8
2fz5_A137 Flavodoxin; alpha/beta doubly-wound topology, non- 99.74
2xod_A119 NRDI protein, NRDI; flavoprotein, redox protein, r 99.72
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 99.7
1ep3_B 262 Dihydroorotate dehydrogenase B (PYRK subunit); het 99.7
1tvc_A250 Methane monooxygenase component C, methane monooxy 99.7
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 99.69
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 99.68
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 99.68
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 99.68
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 99.67
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 99.67
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 99.66
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 99.65
4g1v_A399 Flavohemoglobin; three domains: globin fold, antip 99.65
2pia_A 321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 99.64
1rlj_A139 NRDI protein; flavoprotein, FMN, thioredoxin, alph 99.64
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 99.64
1ycg_A398 Nitric oxide reductase; DIIRON site, oxidoreductas 99.63
2bgi_A 272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 99.62
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 99.61
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 99.6
1e5d_A402 Rubredoxin\:oxygen oxidoreductase; oxygenreductase 99.6
2ark_A188 Flavodoxin; FMN, structural genomics, PSI, structu 99.52
2q9u_A414 A-type flavoprotein; flavodoxin like, beta lactama 99.51
2ohh_A404 Type A flavoprotein FPRA; beta-lactamase like doma 99.51
2a5l_A200 Trp repressor binding protein WRBA; APC5760, PA094 99.5
3b6i_A198 Flavoprotein WRBA; flavoproteins, NADH:quinone oxi 99.43
1ydg_A211 Trp repressor binding protein WRBA; tetramer, stru 99.4
2zki_A199 199AA long hypothetical Trp repressor binding prot 99.39
3n3a_C153 Protein NRDI; ribonucleotide reductase, four-helix 99.39
3d7n_A193 Flavodoxin, WRBA-like protein; structural genomics 99.31
3klb_A162 Putative flavoprotein; structural genomi center fo 99.3
2vzf_A197 NADH-dependent FMN reductase; oxidoreductase; 2.50 99.29
4ici_A171 Putative flavoprotein; PF12682 family protein, fla 99.29
2gpj_A252 Siderophore-interacting protein; structural genomi 99.28
1t5b_A201 Acyl carrier protein phosphodiesterase; structural 99.16
3edo_A151 Flavoprotein, putative Trp repressor binding prote 99.16
1sqs_A242 Conserved hypothetical protein; structural genomic 99.02
1rtt_A193 Conserved hypothetical protein; protein structure 98.99
1t0i_A191 YLR011WP; FMN binding protein, flavodoxin, azoredu 98.96
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 98.95
3gfs_A174 FMN-dependent NADPH-azoreductase; flavoproteins, q 98.93
2q62_A247 ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobi 98.89
3a1f_A 186 Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi 98.89
2hpv_A208 FMN-dependent NADH-azoreductase; structural genomi 98.83
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 98.82
2fzv_A279 Putative arsenical resistance protein; flavin bind 98.8
3fvw_A192 Putative NAD(P)H-dependent FMN reductase; Q8DWD8_s 98.7
1rli_A184 Trp repressor binding protein; structural genomics 98.7
3r6w_A212 FMN-dependent NADH-azoreductase 1; nitrofurazone, 98.67
3k1y_A191 Oxidoreductase; structural genomics, PSI-2, protei 98.56
3rpe_A218 MDAB, modulator of drug activity B; structural gen 98.53
4hs4_A199 Chromate reductase; triple-layered, A/B/A structur 98.53
3lcm_A196 SMU.1420, putative oxidoreductase; NADPH:quinone o 98.52
1d4a_A273 DT-diaphorase, quinone reductase; flavoprotein, ro 98.45
3tem_A228 Ribosyldihydronicotinamide dehydrogenase [quinone; 98.42
3f2v_A192 General stress protein 14; alpha-beta protein., st 98.42
2amj_A204 Modulator of drug activity B; oxidoreductase, mena 98.4
3p0r_A211 Azoreductase; structural genomics, center for stru 98.38
3s2y_A199 Chromate reductase; uranium reductase, oxidoreduct 97.72
3u7i_A223 FMN-dependent NADH-azoreductase 1; structural geno 98.2
3svl_A193 Protein YIEF; E. coli CHRR enzyme, chromate biorem 98.19
3u7r_A190 NADPH-dependent FMN reductase; alpha/beta twisted 98.07
3ha2_A177 NADPH-quinone reductase; structural genomics, PSI- 98.07
4gi5_A280 Quinone reductase; protein structure initiative, F 97.74
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 97.71
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-99  Score=857.97  Aligned_cols=506  Identities=40%  Similarity=0.730  Sum_probs=440.9

Q ss_pred             cchhhHHHHhcCCCeEEEEEECCCchHHHHHHHHHHHHHhhhCCCeEEEEeCCCCCCCchHHHhhhc--cCCeEEEEeec
Q 007547           71 KDEDDEADIAAGKTKVTVFYGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDEQYEEKLK--KETLAFFMVAT  148 (599)
Q Consensus        71 ~~~~~~~~~~~~~~~v~I~YgSqtGtte~~A~~la~~l~~~~~g~~v~v~dl~d~~~~~~~~~~~l~--~~~~vif~~sT  148 (599)
                      .+|+++++|.+.+++|+|+|||||||||++|++|++++.+.  |+.++++|+++++.++   +..+.  +++++||++||
T Consensus         6 ~~~~~~~~~~~~~~~i~I~YgS~tGnte~~A~~la~~l~~~--g~~~~v~~~~~~~~~~---l~~~~~~~~~~vi~~~sT   80 (618)
T 3qe2_A            6 RESSFVEKMKKTGRNIIVFYGSQTGTAEEFANRLSKDAHRY--GMRGMSADPEEYDLAD---LSSLPEIDNALVVFCMAT   80 (618)
T ss_dssp             -CCCHHHHHHHHTCSEEEEEECSSSHHHHHHHHHHHHGGGG--TCCEEEECGGGSCGGG---GGGGGGSTTCEEEEEEEC
T ss_pred             hHHHHHHHHHhcCCeEEEEEECChhHHHHHHHHHHHHHHhC--CCceEEechHHcCHHH---hhhcccccCcEEEEEcCc
Confidence            34689999998889999999999999999999999999887  8999999999999877   22222  47899999999


Q ss_pred             CCCCCCChhHHHHHHHHhcCCCCCCCCCCcEEEEEeecCcchhHHHHHHHHHHHHHHHCCCeEEecceeecCCCCcHHHH
Q 007547          149 YGDGEPTDNAARFYKWFTEGNDRGPWLQQLKFGVFGLGNRQYEHFNKIGIVLDEELCKQGGARLVPLGLGDDDQCIEDDF  228 (599)
Q Consensus       149 yG~G~~p~na~~F~~~L~~~~~~~~~l~~~~~aVFGlGds~Y~~f~~~~k~ld~~L~~lGa~~i~~~g~~D~~~~~e~~~  228 (599)
                      ||+|++|+||..|+++|.+...+   |+|++||||||||++|+|||.++|.++++|+++||++++++|++|++.+++++|
T Consensus        81 ~G~G~~pd~~~~F~~~L~~~~~~---l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~~~~~~~~~  157 (618)
T 3qe2_A           81 YGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDDGNLEEDF  157 (618)
T ss_dssp             BGGGBCCGGGHHHHHHHHHCCCC---CTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETTSCHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHhhcccc---ccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeecccccccCCCcHHHH
Confidence            99999999999999999874323   999999999999999999999999999999999999999999999988999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCCCCCcccCCceEEEEcCCc----ccccCCCC-CCCCCCCCCCCCCCCeeEEEEEee
Q 007547          229 TAWRELVWPELDQLLRDEDDANTVSTPYTAAIPEYRVMIHGPT----VTSSVDNY-SNMPNGNASFDIHHPCRVNVAVRR  303 (599)
Q Consensus       229 ~~W~~~l~~~L~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~p~~a~V~~~~  303 (599)
                      ++|++.+|++|++.+..+....   .   ...+.+++......    +..++... ....+...+|+..+||.|+|++|+
T Consensus       158 ~~W~~~l~~~l~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~~n~  231 (618)
T 3qe2_A          158 ITWREQFWLAVCEHFGVEATGE---E---SSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNR  231 (618)
T ss_dssp             HHHHHHHHHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCcccc---c---ccccceeEEecccccccccccccccccccccccCCCcccCCcEEEEEEeEE
Confidence            9999999999999875432110   0   12245666554211    11111111 111234567899999999999999


Q ss_pred             eecCCCCCCceEEEEEEecCCCCccCCCCeEEEeccCCHHHHHHHHHHhCCCCccEEEEecCCCCCCCCCCCCCCCCCCc
Q 007547          304 ELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGP  383 (599)
Q Consensus       304 ~L~~~~~~r~~~hle~di~~~~l~Y~~GD~l~V~p~N~~~~V~~~l~~lgl~~d~~~~l~~~~~~~~~~~~~~~~pfp~p  383 (599)
                      +|+. +++|+|+|||||+++++++|+|||||+|||.|+++.|+++|++||+++|++|+++..++..     +.+.|||.|
T Consensus       232 ~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~~-----~~~~~~p~~  305 (618)
T 3qe2_A          232 KLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEES-----NKKHPFPCP  305 (618)
T ss_dssp             ECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTTC-----SCCSSSSSS
T ss_pred             EcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCccc-----cCCCCCCCc
Confidence            9996 5679999999999999999999999999999999999999999999999999998765422     356789999


Q ss_pred             hHHHHHHhhhcccCCCccHHHHHHHHhhCCCHHHHHHHHhcc--CCCChhHHHHHHHhcCCCHHHHHhhCCCCCCChHHH
Q 007547          384 CTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLS--SPQGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVF  461 (599)
Q Consensus       384 ~tl~~~l~~y~Dl~~~p~k~~l~~La~~a~d~~ek~~L~~l~--s~~g~~~y~~~~~~~~~sl~dvL~~fps~~~p~~~l  461 (599)
                      +|++++|++|+||+++|+|+||+.||.||+|+.+|++|+.|+  +++|+++|.+|+.++++|++|||++||++++|+++|
T Consensus       306 ~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fps~~~p~~~l  385 (618)
T 3qe2_A          306 TSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHL  385 (618)
T ss_dssp             EEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHH
T ss_pred             eEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHH
Confidence            999999999999999999999999999999999999999998  778999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCceeecCCCCCCCCCEEEEEEEEEEecCCCCCcccCchhHHHhhcCC-CCCCCCceEEEEEeeCCCCcCCC
Q 007547          462 FAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIP-LEGNGDCSWAPIFIRPSNFKLPA  540 (599)
Q Consensus       462 l~~l~p~l~pR~YSIsSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~-g~~~~~~~~v~i~~~~~~F~Lp~  540 (599)
                      ++.+ |+++||+|||||+|..++++++|+|++++++++.|+.+.|+||+||+++.+ |+ ....+.|+|++|.|.|+||.
T Consensus       386 ~~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd-~~~~~~v~v~~p~g~F~lp~  463 (618)
T 3qe2_A          386 CELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGE-NGGRALVPMFVRKSQFRLPF  463 (618)
T ss_dssp             HHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC------CCEEEEEEECCSCCCCS
T ss_pred             HHhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCC-CCcceEEEEEEecCcccCCC
Confidence            9999 999999999999998888999999999999999999999999999999888 61 00012899999999999999


Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHHHhhcCCCCCCEEEEEeccCCCcccchHHhhc
Q 007547          541 NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMVRIFCYLLQ  598 (599)
Q Consensus       541 ~~~~piImIg~GTGIAPfrsflqer~~~~~~g~~~g~~~Lf~G~R~~~~D~ly~~El~  598 (599)
                      ++.+|+||||+||||||||||||+|.++.++|...++++||||||+++.|++|++||+
T Consensus       464 ~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~  521 (618)
T 3qe2_A          464 KATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELA  521 (618)
T ss_dssp             STTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHH
T ss_pred             CCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHH
Confidence            8899999999999999999999999876655555789999999999966999999996
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Back     alignment and structure
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Back     alignment and structure
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens} Back     alignment and structure
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1 Back     alignment and structure
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2 Back     alignment and structure
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Back     alignment and structure
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ... Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Back     alignment and structure
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Back     alignment and structure
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus} Back     alignment and structure
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1 Back     alignment and structure
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1 Back     alignment and structure
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A* Back     alignment and structure
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A* Back     alignment and structure
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A* Back     alignment and structure
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A* Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A* Back     alignment and structure
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Back     alignment and structure
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301} Back     alignment and structure
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1 Back     alignment and structure
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A* Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Back     alignment and structure
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A* Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Back     alignment and structure
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Back     alignment and structure
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 Back     alignment and structure
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8 Back     alignment and structure
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} Back     alignment and structure
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* Back     alignment and structure
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A* Back     alignment and structure
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A* Back     alignment and structure
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A* Back     alignment and structure
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii} Back     alignment and structure
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C* Back     alignment and structure
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens} Back     alignment and structure
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343} Back     alignment and structure
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A* Back     alignment and structure
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii} Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Back     alignment and structure
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A* Back     alignment and structure
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A* Back     alignment and structure
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A* Back     alignment and structure
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4 Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Back     alignment and structure
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A* Back     alignment and structure
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti} Back     alignment and structure
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Back     alignment and structure
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis} Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4 Back     alignment and structure
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans} Back     alignment and structure
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6 Back     alignment and structure
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A* Back     alignment and structure
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A Back     alignment and structure
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis} Back     alignment and structure
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A* Back     alignment and structure
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A* Back     alignment and structure
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A* Back     alignment and structure
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ... Back     alignment and structure
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola} Back     alignment and structure
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A* Back     alignment and structure
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis} Back     alignment and structure
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii} Back     alignment and structure
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis} Back     alignment and structure
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli} Back     alignment and structure
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans} Back     alignment and structure
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745} Back     alignment and structure
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 599
d1ja1a1279 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reducta 2e-87
d1f20a1270 b.43.4.1 (A:963-1232) Neuronal nitric-oxide syntha 8e-67
d1ddga1221 b.43.4.1 (A:226-446) Sulfite reductase flavoprotei 5e-50
d1tlla2202 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FM 3e-42
d1ja1a2177 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductas 4e-42
d1bvyf_152 c.23.5.1 (F:) FMN-binding domain of the cytochrome 7e-35
d1ykga1146 c.23.5.2 (A:63-208) Sulfite reductase alpha-compon 8e-35
d2fcra_173 c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2e-26
d1yoba1179 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelan 5e-26
d1f4pa_147 c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [ 6e-26
d1ja1a3160 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reducta 9e-23
d1czna_169 c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus 1e-21
d1fuea_163 c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [Tax 7e-21
d1ag9a_175 c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 4e-20
d1oboa_169 c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7 5e-20
d1rlja_135 c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis 2e-19
d1f20a2165 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synth 1e-17
d1vmea1148 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, 4e-15
d1fnda2160 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodo 4e-14
d2fz5a1137 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdeni 1e-13
d1jb9a2154 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodo 7e-13
d2bmwa2162 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodo 2e-12
d1ddga2153 c.25.1.4 (A:447-599) Sulfite reductase flavoprotei 3e-12
d5nula_138 c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii 5e-12
d1e5da1152 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreduct 1e-08
d1jb9a1157 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxi 3e-08
d1ycga1149 c.23.5.1 (A:251-399) Nitric oxide reductase C-term 4e-08
d1tvca2141 c.25.1.2 (A:111-251) Methane monooxygenase compone 1e-06
d2cnda2146 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea 5e-06
d1a8pa2158 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodo 9e-06
d1cqxa3142 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal d 3e-05
d1gvha3143 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal d 5e-05
d1krha2133 c.25.1.2 (A:206-338) Benzoate dioxygenase reductas 6e-05
d1qfja2135 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase 6e-05
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 8e-05
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 9e-05
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 3e-04
d1fdra2148 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodo 0.001
d1umka2147 c.25.1.1 (A:154-300) cytochrome b5 reductase {Huma 0.002
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 279 Back     information, alignment and structure

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  270 bits (692), Expect = 2e-87
 Identities = 102/286 (35%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 258 AAIPEYRVMIHGPTVTSSV-----DNYSNMPNGNASFDIHHPCRVNVAVRRELHKPDSDR 312
           ++I +Y +++H     + V         +  N    FD  +P    V   R+L++  ++R
Sbjct: 1   SSIRQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQG-TER 59

Query: 313 SCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPR 372
             +HLE D+S + I YE+GDHV VY  N    V + G++LG  L+++ SL+  +E+   +
Sbjct: 60  HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESNKK 119

Query: 373 GSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQG--K 430
                 PFP P T RTAL  Y DI NPPR   L  LA +A+EPSE E L  ++S  G  K
Sbjct: 120 -----HPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGK 174

Query: 431 DDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVT 490
           + Y  WVV ++R +L ++ ++PS  PPI      + P LQ RYY+I+SS +  P+ VH+ 
Sbjct: 175 ELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHIC 233

Query: 491 CALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNF 536
              V     +GR++KGV ++W++   P   NG  +  P+F+R S F
Sbjct: 234 AVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQF 279
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 270 Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 221 Back     information, alignment and structure
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 202 Back     information, alignment and structure
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 177 Back     information, alignment and structure
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 152 Back     information, alignment and structure
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]} Length = 146 Back     information, alignment and structure
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]} Length = 173 Back     information, alignment and structure
>d1yoba1 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelandii [TaxId: 354]} Length = 179 Back     information, alignment and structure
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} Length = 147 Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure
>d1czna_ c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus PCC 7942 [TaxId: 1140]} Length = 169 Back     information, alignment and structure
>d1fuea_ c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [TaxId: 210]} Length = 163 Back     information, alignment and structure
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]} Length = 175 Back     information, alignment and structure
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]} Length = 169 Back     information, alignment and structure
>d1rlja_ c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423]} Length = 135 Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 165 Back     information, alignment and structure
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 148 Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 160 Back     information, alignment and structure
>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]} Length = 137 Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 154 Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 162 Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]} Length = 138 Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 152 Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 157 Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 149 Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 141 Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Length = 146 Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Length = 158 Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 142 Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 133 Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 135 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
d1ja1a1279 NADPH-cytochrome p450 reductase {Rat (Rattus norve 100.0
d1f20a1270 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 100.0
d1ddga1221 Sulfite reductase flavoprotein {Escherichia coli [ 100.0
d1ja1a2177 NADPH-cytochrome p450 reductase, N-terminal domain 100.0
d1ykga1146 Sulfite reductase alpha-component CysJ N-terminal 100.0
d1tlla2202 Nitric oxide (NO) synthase FMN domain {Rat (Rattus 100.0
d1bvyf_152 FMN-binding domain of the cytochrome P450bm-3 {Bac 99.97
d1f4pa_147 Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} 99.97
d1czna_169 Flavodoxin {Synechococcus elongatus PCC 7942 [TaxI 99.95
d1yoba1179 Flavodoxin {Azotobacter vinelandii [TaxId: 354]} 99.94
d2fcra_173 Flavodoxin {Chondrus crispus [TaxId: 2769]} 99.94
d1ag9a_175 Flavodoxin {Escherichia coli [TaxId: 562]} 99.93
d1oboa_169 Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 11 99.92
d1fuea_163 Flavodoxin {Helicobacter pylori [TaxId: 210]} 99.88
d1rlja_135 Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423] 99.85
d1jb9a1157 Ferredoxin reductase (flavodoxin reductase) N-term 99.85
d1vmea1148 ROO-like flavoprotein TM0755, C-terminal domain {T 99.85
d2fz5a1137 Flavodoxin {Megasphaera elsdenii [TaxId: 907]} 99.85
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 99.84
d5nula_138 Flavodoxin {Clostridium beijerinckii [TaxId: 1520] 99.83
d1ycga1149 Nitric oxide reductase C-terminal domain {Moorella 99.81
d1ja1a3160 NADPH-cytochrome p450 reductase {Rat (Rattus norve 99.7
d1fnda1136 Ferredoxin reductase (flavodoxin reductase) N-term 99.7
d2bmwa1133 Ferredoxin reductase (flavodoxin reductase) N-term 99.67
d2arka1184 Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} 99.56
d1f20a2165 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 99.45
d1fnda2160 Ferredoxin reductase (flavodoxin reductase) {Spina 99.43
d1ddga2153 Sulfite reductase flavoprotein {Escherichia coli [ 99.37
d1jb9a2154 Ferredoxin reductase (flavodoxin reductase) {Maize 99.37
d2bmwa2162 Ferredoxin reductase (flavodoxin reductase) {Cyano 99.36
d1tvca2141 Methane monooxygenase component C, MmoC {Methyloco 99.28
d1ydga_201 Trp repressor binding protein WrbA {Deinococcus ra 99.21
d2piaa2120 Phthalate dioxygenase reductase {Pseudomonas cepac 99.19
d1krha2133 Benzoate dioxygenase reductase {Acinetobacter sp. 99.16
d1qfja2135 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.13
d1fdra2148 Ferredoxin reductase (flavodoxin reductase) {Esche 99.12
d2a5la1196 Trp repressor binding protein WrbA {Pseudomonas ae 99.11
d1gvha3143 Flavohemoglobin, C-terminal domain {Escherichia co 99.1
d2cnda2146 Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} 99.07
d1umka2147 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.05
d1cqxa3142 Flavohemoglobin, C-terminal domain {Alcaligenes eu 99.02
d1a8pa2158 Ferredoxin reductase (flavodoxin reductase) {Azoto 98.95
d1ep3b2 160 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 98.58
d1sqsa_232 Hypothetical protein SP1951 {(Streptococcus pneumo 98.54
d1t0ia_185 Hypothetical protein Ylr011wp {Baker's yeast (Sacc 98.48
d1nni1_171 Azobenzene reductase {Bacillus subtilis [TaxId: 14 98.42
d2fzva1233 Putative arsenical resistance protein {Shigella fl 98.37
d1rlia_179 Hypothetical protein YwqN {Bacillus subtilis [TaxI 98.32
d1rtta_174 Hypothetical protein PA1204 {Pseudomonas aeruginos 98.19
d2qwxa1230 Quinone reductase type 2 (menadione reductase) {Hu 98.17
d1d4aa_273 NAD(P)H:quinone reductase {Human (Homo sapiens) [T 98.01
d2z98a1200 ACP phosphodiesterase AcpD {Escherichia coli [TaxI 98.0
d1fdra199 Ferredoxin reductase (flavodoxin reductase) N-term 97.79
d1cqxa2111 Flavohemoglobin, central domain {Alcaligenes eutro 97.78
d1ep3b1101 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 97.76
d1qfja197 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 97.72
d2cnda1114 Nitrate reductase core domain {Corn (Zea mays) [Ta 97.69
d1a8pa199 Ferredoxin reductase (flavodoxin reductase) N-term 97.59
d2piaa1103 Phthalate dioxygenase reductase {Pseudomonas cepac 97.41
d1gvha2107 Flavohemoglobin, central domain {Escherichia coli 97.38
d1krha1100 Benzoate dioxygenase reductase {Acinetobacter sp. 97.35
d1umka1124 cytochrome b5 reductase {Human (Homo sapiens) [Tax 97.15
d1tvca1109 Methane monooxygenase component C, MmoC {Methyloco 97.14
d2c42a3157 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 88.17
d1ccwa_137 Glutamate mutase, small subunit {Clostridium cochl 80.42
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-55  Score=450.42  Aligned_cols=269  Identities=38%  Similarity=0.697  Sum_probs=243.2

Q ss_pred             CceEEEEcCC----cccccCCCCC-CCCCCCCCCCCCCCeeEEEEEeeeecCCCCCCceEEEEEEecCCCCccCCCCeEE
Q 007547          261 PEYRVMIHGP----TVTSSVDNYS-NMPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVG  335 (599)
Q Consensus       261 ~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~p~~a~V~~~~~L~~~~~~r~~~hle~di~~~~l~Y~~GD~l~  335 (599)
                      .+|+++.++.    .++.++.... ...+.+.||+.+|||.|+|++|++|+. +++|+|+||+|||++++++|+|||||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~nP~~A~v~~n~~L~~-~s~k~~~Hie~dl~~s~l~Y~~GD~l~   82 (279)
T d1ja1a1           4 RQYELVVHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELDISDSKIRYESGDHVA   82 (279)
T ss_dssp             CSEEEEECSSCCGGGSBSSCSSSTTTTTSCCSSCBTTBCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEE
T ss_pred             cceEEEEcCCCCccceecccchhhhhcccCCCCCCCCCCEEeEEEEEEEeCC-CCCccEEEEEEEcCCCCceecCCCEEE
Confidence            4567765543    3456666543 334577899999999999999999995 667999999999999999999999999


Q ss_pred             EeccCCHHHHHHHHHHhCCCCccEEEEecCCCCCCCCCCCCCCCCCCchHHHHHHhhhcccCCCccHHHHHHHHhhCCCH
Q 007547          336 VYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEP  415 (599)
Q Consensus       336 V~p~N~~~~V~~~l~~lgl~~d~~~~l~~~~~~~~~~~~~~~~pfp~p~tl~~~l~~y~Dl~~~p~k~~l~~La~~a~d~  415 (599)
                      |||+|++++|++++++||+++|++|.++..+++.     ..+.|||.|+|++++|++|+||+++|+|++|+.||.||+|+
T Consensus        83 V~P~N~~~~V~~~l~~lgl~~d~~v~~~~~~~~~-----~~~~p~p~~~tl~~lL~~~~Di~~~p~k~~l~~La~~a~~~  157 (279)
T d1ja1a1          83 VYPANDSALVNQIGEILGADLDVIMSLNNLDEES-----NKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEP  157 (279)
T ss_dssp             ECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTTC-----SCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSH
T ss_pred             EEeCCCHHHHHHHHHHcCCCCceEEEeccCCCcc-----ccccCCCCchhHHHHHHhhccccCCCcHHHHHHHHHHcCCh
Confidence            9999999999999999999999999998876533     35779999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCC--CChhHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCCCceeecCCCCCCCCCEEEEEEEE
Q 007547          416 SEAERLKFLSSP--QGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCAL  493 (599)
Q Consensus       416 ~ek~~L~~l~s~--~g~~~y~~~~~~~~~sl~dvL~~fps~~~p~~~ll~~l~p~l~pR~YSIsSsp~~~~~~i~l~v~~  493 (599)
                      .+|++|+.|++.  ++++.|.+|+.+++++++|+|++||++++|++.|++++ |+|+||+|||||||..+|++++|||++
T Consensus       158 ~~k~~L~~l~~~~~~~~~~y~~~~~~~~~~ildlL~~fps~~~pl~~ll~~l-p~L~PR~YSISSSp~~~p~~v~ltv~v  236 (279)
T d1ja1a1         158 SEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELL-PRLQARYYAIASSSKVHPNSVHICAVA  236 (279)
T ss_dssp             HHHHHHHGGGCSSSHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEEC
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHHhcCCCHHHHHhhCcccCCCHHHHHHhC-ccCCCceeeEecCcccCCCEEEEEEEE
Confidence            999999999765  46788999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             EEecCCCCCcccCchhHHHhhcCCCCCCCCceEEEEEeeCCCC
Q 007547          494 VYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNF  536 (599)
Q Consensus       494 v~~~~~~g~~~~G~~S~~L~~l~~g~~~~~~~~v~i~~~~~~F  536 (599)
                      |+|++++|+.|.|+||+||+++.++++..++..|+|++++|+|
T Consensus       237 V~y~~~~g~~r~GvcS~~L~~l~~~~~~~~~~~vpifir~s~F  279 (279)
T d1ja1a1         237 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQF  279 (279)
T ss_dssp             CEEECTTSSEEECHHHHHHHHCCCCSTTSSCCEEEEEEECCSC
T ss_pred             EEeecCCCCcccccchHHHhhcCCCCCcCCceEEEEEEcCCCC
Confidence            9999999999999999999999998666666789999999988
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ja1a2 c.23.5.2 (A:63-239) NADPH-cytochrome p450 reductase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tlla2 c.23.5.2 (A:750-951) Nitric oxide (NO) synthase FMN domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bvyf_ c.23.5.1 (F:) FMN-binding domain of the cytochrome P450bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} Back     information, alignment and structure
>d1czna_ c.23.5.1 (A:) Flavodoxin {Synechococcus elongatus PCC 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1yoba1 c.23.5.1 (A:1-179) Flavodoxin {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2fcra_ c.23.5.1 (A:) Flavodoxin {Chondrus crispus [TaxId: 2769]} Back     information, alignment and structure
>d1ag9a_ c.23.5.1 (A:) Flavodoxin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]} Back     information, alignment and structure
>d1fuea_ c.23.5.1 (A:) Flavodoxin {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1rlja_ c.23.5.7 (A:) Flavoprotein NrdI {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]} Back     information, alignment and structure
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nni1_ c.23.5.4 (1:) Azobenzene reductase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d4aa_ c.23.5.3 (A:) NAD(P)H:quinone reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2z98a1 c.23.5.3 (A:1-200) ACP phosphodiesterase AcpD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d2c42a3 c.48.1.3 (A:259-415) Pyruvate-ferredoxin oxidoreductase, PFOR, domain II {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} Back     information, alignment and structure