Citrus Sinensis ID: 007566

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------60
Protein Sequence
MAAATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGVLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA
Secondary Structure (PSIPRED)
ccccccccHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccHHccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHcccccccccccccEEEEEEcccEEEccEEEEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccHccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccEEcccccccHHccccccEEEcccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHccccccccccccEEEEEEEccEEEccEEEEEEEEEEEcccc
Coil and Loop (DISEMBL)
MAAATTATQIFqnhdsgnennnnneVSRQEIQAAIAKAVELRALHSALMqgnspaannrfnssstspvsrpvsqfsahdypvftpsyedepvtgyhqihsknpsgtwdeyaldggngnestlSDYKKEILsskkglpsglasfeshfcpaddqksvtgsctnhitvlqtspgtevykssrrnslgdfksvsscnrckpavitsesENVVRSIRssnivvpltdshsmvhsqpksrggvlswlfprlkkkhksenspnrteseeVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHakdshqvneklgnfprrgksidgngeslmpvsEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQpyklslsskYSKAVLYHLEAMINQSLyqdfencvfqkngspkildpqqdRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIIttlnwtrpwpEQLLQAFFVAAKCIWLLHLLafsfnpplgilrvednrsfdAHYMEDMLMDrqkshgssrvkIMVMPGFYVQDKVLRCKVLCRYKSAA
Flexible Loop (DISEMBL)
maaattatqifqnhdsgnennNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITvlqtspgtevykssrrnslgdfksvsscnrckpavitsesenvvrsIRSSNIvvpltdshsmvhsqpksrggvlSWLFPRLKkkhksenspnrteseevsqvfkDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAAThakdshqvneklgnfprrgksidgNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPgfyvqdkvlrCKVLCRYKSAA
Low Complexity Region (SEG)
MAAATTATQIFQNHDSGnennnnneVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNssstspvsrpvsQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESEnvvrsirssnivvPLTDSHSMVHSQPKSRGGVLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPyklslsskyskavlyHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA
Disordered region (IsUnstruct)
**********************************************************************************F***************************************************************************SCTNHITVL********************************VI***************IVV******************VLSWLF***********************VFKDLGILSIETL****************************RQKLEYLEAYCEELK*******************************************AMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNG************AQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDM***********RVKIMVMPGFYVQDKVLRCKVLCRY****
Disordered Region (DISOPRED)
******************************IQAAIAKAVELRALHSA*******************************DYPVFTPSYEDEPVTGY***********W***ALDGGNGNE****************************************************************************C*PA********************************************************************************************************************A**EE**********************************************MVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLS*SSKYSKAVLYHLEAMINQSLYQDFENCVFQKNG********QDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYM***************VKIMVMPGFYVQDKVLRCKVLCRYK***
Disordered Region (DISEMBL)
MAAATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAAN***************SQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLT************RGGVLSWLFPRLK******************QVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKA*************VNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA
Disordered Region (DISPRO)
**********************NNEVSRQEIQAAIAKAVELRALHSALMQ***************************HDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSK**LPS***SFESHFC****QKSVTGSCTNHITVL*T*P****Y************SVSSCNRCKPAVIT****NV**SI**SNIVVPLTDS***********GGVLSWLFPRLKKK*KS*NSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFP*R**********LMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGVLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSxxxxxxxxxxxxxxxxxxxxxVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	598
225435528	591	PREDICTED: uncharacterized protein LOC10	0.981	0.993	0.767	0.0
255544784	598	conserved hypothetical protein [Ricinus	0.993	0.993	0.787	0.0
224053384	581	predicted protein [Populus trichocarpa]	0.954	0.982	0.766	0.0
356541874	589	PREDICTED: uncharacterized protein LOC10	0.978	0.993	0.726	0.0
356541177	588	PREDICTED: uncharacterized protein LOC10	0.974	0.991	0.713	0.0
449448762	572	PREDICTED: uncharacterized protein LOC10	0.943	0.986	0.713	0.0
357454383	656	hypothetical protein MTR_2g098420 [Medic	0.944	0.861	0.695	0.0
356557380	477	PREDICTED: uncharacterized protein LOC10	0.785	0.985	0.765	0.0
297811405	559	hypothetical protein ARALYDRAFT_488108 [	0.882	0.944	0.585	1e-176
15239939	562	uncharacterized protein [Arabidopsis tha	0.892	0.950	0.583	1e-174

>gi|225435528|ref|XP_002283014.1| PREDICTED: uncharacterized protein LOC100265521 [Vitis vinifera] gi|297746366|emb|CBI16422.3| unnamed protein product [Vitis vinifera]

 Score =  958 bits (2476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/602 (76%), Positives = 526/602 (87%), Gaps = 15/602 (2%)

Query: 1   MAAATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRF 60
           MAAAT ATQ+FQ H+S    N ++EVSRQEIQAAIAKAVELRALH+AL+QGNSPA     
Sbjct: 1   MAAATPATQVFQGHNS----NGDHEVSRQEIQAAIAKAVELRALHAALIQGNSPA---NL 53

Query: 61  NSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIH---SKNPSGTWDEYALDGGNG 117
              + SPVSRP S FSA DYPVFTPSY DEP+ GYHQ+H    +N S +WD   L GGN 
Sbjct: 54  KYPTASPVSRPPSHFSAQDYPVFTPSYGDEPLPGYHQLHVENDRNLSESWDMEGL-GGND 112

Query: 118 NESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYK 177
           NE+ +SDYKKEI SS+KGLPSGL S E H CP +DQKS+T +C NHITVLQTSPGT+ +K
Sbjct: 113 NETIMSDYKKEI-SSRKGLPSGLVSLEPHVCPTEDQKSLTSACANHITVLQTSPGTDFFK 171

Query: 178 SSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGG 237
           SSRRNSLG+FKS+SSCN+C+PA+I++E+EN V++ + S+ VVPLTDSHS V SQPK+RG 
Sbjct: 172 SSRRNSLGEFKSLSSCNKCRPAIISTEAENTVKNSKGSSFVVPLTDSHSSVQSQPKNRGV 231

Query: 238 VLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEV 297
            LSWLFPRLKKKHK+E+SPNRTESEEVSQ+FKDLGI+SIETLK+ELM+ANESRDAALMEV
Sbjct: 232 SLSWLFPRLKKKHKNESSPNRTESEEVSQIFKDLGIMSIETLKKELMDANESRDAALMEV 291

Query: 298 SEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKS-IDGNG 356
           +EM+SS GEL+QKLEYLE YCEELK+ L+Q A  AKD  Q  EKL + P+RGKS IDGNG
Sbjct: 292 AEMKSSLGELKQKLEYLETYCEELKRVLKQTA-QAKD-LQAPEKLRSLPKRGKSSIDGNG 349

Query: 357 ESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLS 416
           E+ +PVSEE MVEGFLQIVSEARLSVKQFCK L+ QIEE+D+TL DNLN LLQPYKLSL+
Sbjct: 350 ENFIPVSEEVMVEGFLQIVSEARLSVKQFCKILIGQIEESDNTLTDNLNSLLQPYKLSLT 409

Query: 417 SKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNE 476
           SKYSKAVLYHLEA+INQSLYQDFENCVFQKNG+ K+LDP QDRQA+F+SFV+LRNLSWNE
Sbjct: 410 SKYSKAVLYHLEAIINQSLYQDFENCVFQKNGTAKLLDPHQDRQARFSSFVALRNLSWNE 469

Query: 477 VLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFN 536
           VLRKGTK+YSEEFSKFCDQKMSCII+TLNWTRPWPEQLLQ+FFV+AKCIWLLHLLAFSFN
Sbjct: 470 VLRKGTKYYSEEFSKFCDQKMSCIISTLNWTRPWPEQLLQSFFVSAKCIWLLHLLAFSFN 529

Query: 537 PPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKS 596
           PPLGILRVE+NRSFD HYMEDM MDRQ+S G SRVKIMVMPGFYVQD+VLRCKVLCRYKS
Sbjct: 530 PPLGILRVEENRSFDPHYMEDMFMDRQRSQGPSRVKIMVMPGFYVQDRVLRCKVLCRYKS 589

Query: 597 AA 598
            A
Sbjct: 590 VA 591

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544784|ref|XP_002513453.1| conserved hypothetical protein [Ricinus communis] gi|223547361|gb|EEF48856.1| conserved hypothetical protein [Ricinus communis]

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/601 (78%), Positives = 525/601 (87%), Gaps = 7/601 (1%)

Query: 1   MAAATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRF 60
           MAAA TA+  F  +     +NNN+EVSRQEIQAAIAKAVELRALH+ALM GNSPA     
Sbjct: 1   MAAAFTASHQFFQNLENKNDNNNHEVSRQEIQAAIAKAVELRALHAALMHGNSPA---NL 57

Query: 61  NSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQI--HSKNPSGTWDEYALDGGNGN 118
           +  S+SPVSRPVSQFSA DYPVFTPSYEDE + G HQ+   S+  S +WDEY ++ G+  
Sbjct: 58  SYPSSSPVSRPVSQFSAQDYPVFTPSYEDEILPGDHQLLPKSRTLSESWDEYGIEAGSTY 117

Query: 119 ESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTS-PGTEVYK 177
           E+ LSDYKK+ L S KG+PSGLAS E H CPA+DQKSVTGS  N+ITVL TS PGTE Y+
Sbjct: 118 ETVLSDYKKDSLISGKGIPSGLASLEPHICPAEDQKSVTGSSANNITVLHTSSPGTEFYR 177

Query: 178 SSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGG 237
           SSRRNSL DFKS SSCNRCKPA I SESE   ++ ++SNIVVP TDSHS V SQP++RGG
Sbjct: 178 SSRRNSLADFKSASSCNRCKPATIASESEYASKNSKNSNIVVPWTDSHSSVQSQPRNRGG 237

Query: 238 VLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEV 297
           V+SWLFP+LKKKHK+ENSPN+TESEEVSQVFKDLGI+SIETLKREL EANE+RDAALMEV
Sbjct: 238 VMSWLFPKLKKKHKTENSPNQTESEEVSQVFKDLGIISIETLKRELAEANENRDAALMEV 297

Query: 298 SEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGE 357
           +EM+SS G+LRQKLEYLE+YCEELKKALRQA T AK S Q  EKLGNFP+RGKS DGNGE
Sbjct: 298 AEMKSSLGDLRQKLEYLESYCEELKKALRQA-TLAKGSQQAPEKLGNFPKRGKSNDGNGE 356

Query: 358 SLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSS 417
           +LMPVSEE MVEGFLQIVSEARLSVKQFCKTLV QIEETD TLMDNLN+LL+PYKLSL+S
Sbjct: 357 NLMPVSEEVMVEGFLQIVSEARLSVKQFCKTLVGQIEETDGTLMDNLNLLLEPYKLSLNS 416

Query: 418 KYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEV 477
           +YSKAVLYHLEA+INQSLYQDFEN VFQKNGSPK LDPQQDRQA FASFV LRNLSWNEV
Sbjct: 417 RYSKAVLYHLEAIINQSLYQDFENSVFQKNGSPKHLDPQQDRQAHFASFVGLRNLSWNEV 476

Query: 478 LRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNP 537
           LRKGTK+YSEEFSKFCDQKMSCIITT+NWTRPWPE LLQAFFV+AKCIWLLHLLAFSFNP
Sbjct: 477 LRKGTKYYSEEFSKFCDQKMSCIITTMNWTRPWPEALLQAFFVSAKCIWLLHLLAFSFNP 536

Query: 538 PLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSA 597
            LGILR+E+NRSFD HYMEDM MDRQ+SHG SRVKIMVMPGFYVQD+VLRCKV+CRYKS+
Sbjct: 537 SLGILRIEENRSFDPHYMEDMFMDRQRSHGPSRVKIMVMPGFYVQDRVLRCKVICRYKSS 596

Query: 598 A 598
           A
Sbjct: 597 A 597

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053384|ref|XP_002297793.1| predicted protein [Populus trichocarpa] gi|222845051|gb|EEE82598.1| predicted protein [Populus trichocarpa]

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/591 (76%), Positives = 504/591 (85%), Gaps = 20/591 (3%)

Query: 9   QIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNSSSTSPV 68
           Q  QNHD     N N +VSR+E+QA+IAKAV+LRALH+ALMQGNSPA N RF SSS  PV
Sbjct: 8   QSLQNHD-----NTNQDVSRKELQASIAKAVDLRALHAALMQGNSPA-NLRFPSSS--PV 59

Query: 69  SRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSK--NPSGTWDEYALDGGNGNESTLSDYK 126
           SR    FSA DYPVFTPSYEDE + G+HQI +K    S +WDE+ L+GG+G E+ LSDYK
Sbjct: 60  SRSAPYFSAQDYPVFTPSYEDERLPGHHQILTKARTLSESWDEFGLEGGSGYETVLSDYK 119

Query: 127 KEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLGD 186
           KE  SS+KG+PS +    S+ CPA+DQKSVT S  N+ITV Q  P TE YK SR NSL D
Sbjct: 120 KENSSSRKGIPSDI----SNICPAEDQKSVTSSPANNITVYQ--PETESYKFSRMNSLAD 173

Query: 187 FKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGVLSWLFPRL 246
           FKS+SS NRCKPA IT+ESE V R+ + SNIVVPLTDSHS + SQPK+R  V+SWLFP+L
Sbjct: 174 FKSISSFNRCKPATITTESEKVTRNSKHSNIVVPLTDSHSSLQSQPKNRR-VMSWLFPKL 232

Query: 247 KKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGE 306
           +KK K++NS N+TESEEVSQ FKDLGILSIE+LKR+LMEANE RDAAL EV+EM+SS G+
Sbjct: 233 RKKQKNDNSSNQTESEEVSQTFKDLGILSIESLKRKLMEANEHRDAALTEVAEMKSSLGD 292

Query: 307 LRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEA 366
           LR KLEYLE+YCEELKKALRQA T AKDS QV EKLGN P RGKSIDGNGE+LMPVSEE 
Sbjct: 293 LRYKLEYLESYCEELKKALRQA-TQAKDS-QVVEKLGNLPNRGKSIDGNGENLMPVSEEV 350

Query: 367 MVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYH 426
           MVEGFLQIVSEARLSVKQFCKTL  QIEETD TLMD+LN+LLQPYKLSL SKYSKAVLYH
Sbjct: 351 MVEGFLQIVSEARLSVKQFCKTL-GQIEETDSTLMDSLNLLLQPYKLSLKSKYSKAVLYH 409

Query: 427 LEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYS 486
           LEA+INQSLYQDFENCVFQKNGSPK LDP QDRQAQF+SFV+LRNLSWNEVLRKGTK+YS
Sbjct: 410 LEAIINQSLYQDFENCVFQKNGSPKNLDPNQDRQAQFSSFVALRNLSWNEVLRKGTKYYS 469

Query: 487 EEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVED 546
           EEFSKFCDQKMSCIITT+NWT  WPE LLQAFFVAAKCIWLLHLLAFSFNPPLGILRVE+
Sbjct: 470 EEFSKFCDQKMSCIITTINWTATWPEHLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEE 529

Query: 547 NRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSA 597
           NR+FD H+MEDM MDRQ+SH  SRVKIMVMPGFYVQD+VLRCKVLCRYKS 
Sbjct: 530 NRNFDPHFMEDMFMDRQRSHRQSRVKIMVMPGFYVQDRVLRCKVLCRYKSV 580

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541874|ref|XP_003539397.1| PREDICTED: uncharacterized protein LOC100814681 [Glycine max]

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/599 (72%), Positives = 498/599 (83%), Gaps = 14/599 (2%)

Query: 3   AATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNS 62
           AATTAT    + D  + NN N E++RQEIQAAIAKAVELRALH+ALM+GNSPA N RF  
Sbjct: 2   AATTATSAQVSKDYKDSNNGNPEITRQEIQAAIAKAVELRALHAALMRGNSPA-NARF-- 58

Query: 63  SSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQ--IHSKNPSGTWDEYALDGGNGNES 120
            S SP S PVS FSA DYPVFTPSYED+ + GY Q  + S   S +WD   L+GGN  E+
Sbjct: 59  PSPSPASGPVSHFSAQDYPVFTPSYEDDSMVGYTQNSMKSLTVSESWDGSVLEGGNSVEN 118

Query: 121 TLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTE-VYKSS 179
            ++ YK +  SS+KGL +G A+ ESH CP +D KSVTGS  N ITVLQTSP  +  +K  
Sbjct: 119 IVAYYKGKS-SSRKGLYAGFANLESHICPTEDTKSVTGSSANQITVLQTSPANDDFFKCR 177

Query: 180 RRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGVL 239
           RRNS+ DFKS SSCN+C PA +TSE EN  R+ +SSNIVVP+TDSHS + SQPKS+G V+
Sbjct: 178 RRNSMEDFKSASSCNKCNPATLTSEFENA-RNSKSSNIVVPVTDSHSSLQSQPKSKG-VI 235

Query: 240 SWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSE 299
           SWLFPRLKKKHK+ENSPNR ESE+VSQV KDLGI+SIETLK+EL+EANE+RD ALMEVSE
Sbjct: 236 SWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSIETLKKELVEANENRDVALMEVSE 295

Query: 300 MRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESL 359
           MRSS GEL+QKLEYLE+YCEELKKAL+QA    +DS Q  ++L + P+RGKS +GNGE+L
Sbjct: 296 MRSSLGELKQKLEYLESYCEELKKALKQA-MQTRDS-QPCDQLSSLPQRGKSFEGNGENL 353

Query: 360 MPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKY 419
           MPVSEE MVEGFLQIVSE+RLSVKQFCKTL+  IEETDH+L +NLN+LLQPYKLSL+SKY
Sbjct: 354 MPVSEEVMVEGFLQIVSESRLSVKQFCKTLINHIEETDHSLTENLNLLLQPYKLSLNSKY 413

Query: 420 SKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLR 479
           SKAVLYH EA INQ LYQDFENCVFQKNG  K LDPQQDRQAQF+SFV+LRNLSW+EVLR
Sbjct: 414 SKAVLYHFEAFINQFLYQDFENCVFQKNGCSKFLDPQQDRQAQFSSFVALRNLSWSEVLR 473

Query: 480 KGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPL 539
           KGTK+YSEEFSKFCDQKMSCI T+L WTRPWPEQLLQAFFVAAKC+WLLHLLAFSFNPPL
Sbjct: 474 KGTKYYSEEFSKFCDQKMSCINTSLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPL 533

Query: 540 GILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA 598
           GILRVE+N++FD  YMEDM     +S G SRVKIMVMPGFYVQD+VLRCKVLCRYKSAA
Sbjct: 534 GILRVEENKTFDPQYMEDMC---PRSQGPSRVKIMVMPGFYVQDRVLRCKVLCRYKSAA 589

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541177|ref|XP_003539057.1| PREDICTED: uncharacterized protein LOC100779911 [Glycine max]

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/600 (71%), Positives = 497/600 (82%), Gaps = 17/600 (2%)

Query: 3   AATTAT--QIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRF 60
           AATTAT  Q+F+  D  + NN N E++R EIQAAIAKAVELRALH+ALM+GNSPA N RF
Sbjct: 2   AATTATSAQVFK--DYKDSNNGNPEITRHEIQAAIAKAVELRALHAALMRGNSPA-NARF 58

Query: 61  NSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQ--IHSKNPSGTWDEYALDGGNGN 118
              S SP SRPV+ FSA DYPVFTPSYED+P+ GY+Q  + S   S +WD   L+GGN  
Sbjct: 59  --PSPSPASRPVAHFSAQDYPVFTPSYEDDPLVGYNQNSMKSLTVSESWDGSMLEGGNNI 116

Query: 119 ESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKS 178
           ++ ++DYK E  SS+KGL +G A+ ESH CP +D KSVTGS  N ITVLQTSP  + +K 
Sbjct: 117 DNIVADYK-ERSSSRKGLYAGFANLESHICPTEDTKSVTGSSANQITVLQTSPPKDYFKC 175

Query: 179 SRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGV 238
            RRNS+ DFKSVSSCN+C PA +TSE EN  R+ +SSNIVV +TDS S + SQ K++G V
Sbjct: 176 RRRNSMEDFKSVSSCNKCNPATLTSEFENA-RNSKSSNIVVQVTDSRSSLQSQTKNKG-V 233

Query: 239 LSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVS 298
           +SWLFPRLKKKHK+ENSPNR ESE+VSQV KDLGI+SIETLK+EL+EANE+RD ALMEVS
Sbjct: 234 ISWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSIETLKKELVEANENRDMALMEVS 293

Query: 299 EMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGES 358
           EMR+S GEL+QKLEYLE+YC+ELKKAL+QA    +D  Q+ ++L + P+  KS +GNGE+
Sbjct: 294 EMRNSLGELKQKLEYLESYCKELKKALKQA-VQPRD-FQLCDQLSSLPQSRKSFEGNGEN 351

Query: 359 LMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSK 418
           LMPVSEE MVEGFLQIVSE+RLSVKQFCKTL+  IEETDH+L +NLN LLQPYKLSL+SK
Sbjct: 352 LMPVSEEVMVEGFLQIVSESRLSVKQFCKTLINHIEETDHSLTENLNFLLQPYKLSLNSK 411

Query: 419 YSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVL 478
           YSKAVLYH EA INQSLYQDFENCVFQKNG  K L+PQQDRQ QF+SFV+LRNLSWNEVL
Sbjct: 412 YSKAVLYHFEAFINQSLYQDFENCVFQKNGCSKFLNPQQDRQTQFSSFVALRNLSWNEVL 471

Query: 479 RKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPP 538
           RKGTK+YSEEFSKFCDQKM CI T+L WTRPWPEQLLQAFFVAAKC+WLLHLLAFSFNPP
Sbjct: 472 RKGTKYYSEEFSKFCDQKMYCINTSLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPP 531

Query: 539 LGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSAA 598
           LGILRVE+N++FD  YMEDM     +S G  RVKIMVMPGFYVQD+VLRCKVLCRYKSAA
Sbjct: 532 LGILRVEENKTFDPQYMEDMC---PRSQGPRRVKIMVMPGFYVQDRVLRCKVLCRYKSAA 588

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448762|ref|XP_004142134.1| PREDICTED: uncharacterized protein LOC101208797 [Cucumis sativus] gi|449520807|ref|XP_004167424.1| PREDICTED: uncharacterized protein LOC101232056 [Cucumis sativus]

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/603 (71%), Positives = 494/603 (81%), Gaps = 39/603 (6%)

Query: 3   AATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPAANNRFNS 62
           AAT+AT++F  H++G       +VSRQEIQAAIAKAVELRALH+ALMQG+SP+ N RF S
Sbjct: 2   AATSATKMF--HNAG-------DVSRQEIQAAIAKAVELRALHAALMQGSSPS-NLRFPS 51

Query: 63  SSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSK--NPSGTWDEYALDGG----N 116
            S      PVSQFSA DYPVFTPSYEDEP  GYHQ+  +    S +WDEY L GG    N
Sbjct: 52  PS------PVSQFSAQDYPVFTPSYEDEPTNGYHQVPMRIGTFSESWDEYGLGGGGGGGN 105

Query: 117 GNESTLSDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGTEVY 176
            +E+ LSDYKKEI    KGL S   + E H CPA+D K +TG         QTSP  + +
Sbjct: 106 DDETVLSDYKKEI---SKGLVSDFTNLEPHICPAEDHKPLTGFS------FQTSPANDYF 156

Query: 177 KSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRG 236
           KSSRRNSLGD KSVSSCNRC+PA+IT E++N  ++ R SN +VPLTDSH    SQPKSRG
Sbjct: 157 KSSRRNSLGDSKSVSSCNRCRPAIITKETDNTAKNSRLSNTIVPLTDSHLSTQSQPKSRG 216

Query: 237 GVLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALME 296
            V+S LFPRLKKK+K ENSPNRTESE+VSQ+FKDLGI+SIETLK+EL+ ANE+RDAALME
Sbjct: 217 -VISRLFPRLKKKNKYENSPNRTESEDVSQIFKDLGIVSIETLKKELINANETRDAALME 275

Query: 297 VSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDG-N 355
           VSEM++S GELRQKLE LE YCEELK+AL+QA T+A+D         N  +R  S  G N
Sbjct: 276 VSEMKTSLGELRQKLEGLENYCEELKRALKQA-TNARDLQTAT----NLHKRITSTSGMN 330

Query: 356 GESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSL 415
            E+ MPVSEE MVEGFLQIVSEARLSVKQFCKTLV+QIEETD+TLM+NLN++LQPYKLSL
Sbjct: 331 EENRMPVSEEVMVEGFLQIVSEARLSVKQFCKTLVSQIEETDNTLMENLNLILQPYKLSL 390

Query: 416 SSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWN 475
           +SKYS+AVLYHLEA+INQ+LYQDFENCVFQKNGSPK+LDP QDRQAQF+SFV+LRNLSWN
Sbjct: 391 NSKYSRAVLYHLEAIINQALYQDFENCVFQKNGSPKLLDPHQDRQAQFSSFVALRNLSWN 450

Query: 476 EVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSF 535
           EVLRKGTK+YSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVA KCIWLLHLLAFSF
Sbjct: 451 EVLRKGTKYYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAGKCIWLLHLLAFSF 510

Query: 536 NPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYK 595
           +PPL ILRVE+NRSFD+ YM+D+  +RQK +G SRVKIMVMPGFYVQDK+LRCKV+CRYK
Sbjct: 511 DPPLKILRVEENRSFDSSYMDDVFAERQK-NGPSRVKIMVMPGFYVQDKILRCKVVCRYK 569

Query: 596 SAA 598
           S A
Sbjct: 570 SLA 572

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454383|ref|XP_003597472.1| hypothetical protein MTR_2g098420 [Medicago truncatula] gi|355486520|gb|AES67723.1| hypothetical protein MTR_2g098420 [Medicago truncatula]

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/611 (69%), Positives = 486/611 (79%), Gaps = 46/611 (7%)

Query: 3   AATTATQIFQNHDSGNENNNNNEVSRQEIQAAIAKAVELRALHSALMQGNSPA-----AN 57
           AA T+ Q FQ         NNNE++RQEIQ AIAKAVELRALH+AL QGNSP+     A 
Sbjct: 2   AAATSQQPFQQ--------NNNELNRQEIQTAIAKAVELRALHAALTQGNSPSPSPGPAK 53

Query: 58  NRFNSSSTSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQ--IHSKNPSGTWDEYALDGG 115
            RF S S      PVSQFSA DYPVFTPSYEDEP    HQ    S+  S +WDE  ++GG
Sbjct: 54  ARFPSPS------PVSQFSAQDYPVFTPSYEDEP----HQNRTKSRTVSESWDENGVEGG 103

Query: 116 NGNESTLSDYKKEILSSKKGLPSGLASF---ESHFCP----ADDQKSVTGSCTNHITVLQ 168
           N  EST+    K+   S+K L  G ++    ESH CP     DD KSVTGSC N+ITVLQ
Sbjct: 104 NIMESTIVQDYKDKSCSRKVLRFGFSTNLNQESHMCPIDDDDDDTKSVTGSCANNITVLQ 163

Query: 169 TSPG-TEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSM 227
           TSP   E +KS RRNSL D K +SSCNRCKPA+ITSE +N   + RSSNIVVPLTDSH+ 
Sbjct: 164 TSPSPNEYFKSRRRNSLDDVKPLSSCNRCKPALITSEFDNTKNNNRSSNIVVPLTDSHAS 223

Query: 228 VHSQPKSRGGVLSWLFPRLKKKHKSEN---SPNRTESEEVSQVF-KDLGILSIETLKREL 283
             +Q KS+G ++SWLFP+ KKKHK++N   SPNRTESEEVSQ+  KD+GI+SIE LKREL
Sbjct: 224 FQTQHKSKG-MISWLFPKFKKKHKNKNEIFSPNRTESEEVSQILNKDMGIMSIEMLKREL 282

Query: 284 MEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLG 343
           MEA+ESRD+A++EVSEMRSSFGEL+QKLEYLE YCEELKKAL+QA   AK+S   +EKLG
Sbjct: 283 MEAHESRDSAIIEVSEMRSSFGELKQKLEYLEGYCEELKKALKQA-MQAKESPLCDEKLG 341

Query: 344 NFPRRGKSIDGNGESLM-PVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMD 402
             P      DGNGE+LM PV+E+ MVEGFLQIVSE+RLSVKQFCKTL++QIEE D TL++
Sbjct: 342 -IP-----FDGNGENLMMPVNEDVMVEGFLQIVSESRLSVKQFCKTLISQIEENDQTLIE 395

Query: 403 NLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQ 462
           NLN+LLQPYKLSL SKYSKAVLYH EA IN SLYQDFENCVFQKNGS K LDP+QDR+AQ
Sbjct: 396 NLNLLLQPYKLSLDSKYSKAVLYHFEAFINNSLYQDFENCVFQKNGSAKFLDPRQDRRAQ 455

Query: 463 FASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAA 522
           F+SFV+LRNLSWNEVL+KGTK+YSEEFSKFCDQKMSCIITTLNW RPWPE LLQAFFVAA
Sbjct: 456 FSSFVALRNLSWNEVLKKGTKYYSEEFSKFCDQKMSCIITTLNWLRPWPEPLLQAFFVAA 515

Query: 523 KCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQ 582
           KCIWLLHLLAFSF P LGILRVE+NRSFD +YMED+++DRQ+S G SRVKIMVMPGFYVQ
Sbjct: 516 KCIWLLHLLAFSFTPTLGILRVEENRSFDGYYMEDLVIDRQRSQGPSRVKIMVMPGFYVQ 575

Query: 583 DKVLRCKVLCR 593
           DKVLRCKV+CR
Sbjct: 576 DKVLRCKVICR 586

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557380|ref|XP_003546994.1| PREDICTED: uncharacterized protein LOC100813506 [Glycine max]

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/478 (76%), Positives = 415/478 (86%), Gaps = 8/478 (1%)

Query: 123 SDYKKEILSSKKGLPSGLASFESHFCPADDQKSVTGSCTNHITVLQTSPGT---EVYKSS 179
           SDYK E L+S+K LP G  + ++H CPADD KSVTGSC NHIT LQTSP     + +KS 
Sbjct: 4   SDYK-EKLNSRKELPFGFGNLDTHMCPADDSKSVTGSCANHITFLQTSPAAVANDYFKSR 62

Query: 180 RRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPKSRGGVL 239
           RRNSLGD K +SSCNRC PAVITSE E+  R+ +SSNIVVPLTDSH    +QPKS+G V+
Sbjct: 63  RRNSLGDLKPLSSCNRCNPAVITSEYEST-RNNKSSNIVVPLTDSHVSFQTQPKSKG-VI 120

Query: 240 SWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSE 299
           SWLFPR KKKHK+ +SP+RTESEEVSQV KD+GI+S+E LKRELMEANESRD ALMEVSE
Sbjct: 121 SWLFPRFKKKHKNVSSPSRTESEEVSQVLKDMGIVSVEALKRELMEANESRDTALMEVSE 180

Query: 300 MRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESL 359
           MRSS GEL+QKLEYLE+YCEELKKALRQA    + +   +EKL + P+RG   DGNGE+L
Sbjct: 181 MRSSLGELKQKLEYLESYCEELKKALRQAMLTKETT--FSEKLNSPPQRGTPFDGNGENL 238

Query: 360 MPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKY 419
           MPVSE+ MVEGFLQIVSE+RLSVKQFCKTL+ QIEETDH LMDNLN+LLQPY+LSL+SKY
Sbjct: 239 MPVSEDVMVEGFLQIVSESRLSVKQFCKTLICQIEETDHPLMDNLNLLLQPYRLSLNSKY 298

Query: 420 SKAVLYHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLR 479
           SKAVLYH EA INQS YQDFEN VFQKNG  K LDP+QDRQAQF+SFV+LRNLSWNEVLR
Sbjct: 299 SKAVLYHFEAFINQSFYQDFENSVFQKNGCTKFLDPRQDRQAQFSSFVALRNLSWNEVLR 358

Query: 480 KGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPL 539
           KGTK+YSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPL
Sbjct: 359 KGTKYYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPL 418

Query: 540 GILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKSA 597
           GILRVE+NR+FD HYMED++ DRQ+S G SRVKIMV+PGFYVQD++LRC+V+CR+KSA
Sbjct: 419 GILRVEENRNFDPHYMEDLVTDRQRSQGPSRVKIMVVPGFYVQDRILRCRVICRHKSA 476

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811405|ref|XP_002873586.1| hypothetical protein ARALYDRAFT_488108 [Arabidopsis lyrata subsp. lyrata] gi|297319423|gb|EFH49845.1| hypothetical protein ARALYDRAFT_488108 [Arabidopsis lyrata subsp. lyrata]

 Score =  626 bits (1615), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 343/586 (58%), Positives = 423/586 (72%), Gaps = 58/586 (9%)

Query: 29  QEIQAAIAKAVELRALHSALMQ-GNSPAAN----NRFNSSSTSPVSRPVSQFSAHDYPVF 83
           +E + AIA  V+LRAL ++LMQ  +SP++N    N  +SS+ SP SRP    SAHDYPVF
Sbjct: 12  REKEEAIANGVKLRALQASLMQMKSSPSSNYSLRNPSSSSAASPASRPFPNLSAHDYPVF 71

Query: 84  TPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASF 143
           TPSYEDEPV+ +H   +   S TWDE  +   +G ++ LSD  K   S K  +P+     
Sbjct: 72  TPSYEDEPVSAFHH-KNLTLSETWDEDGVGLVDG-DTYLSDSYKTSTSRKTVMPNQ---- 125

Query: 144 ESHFCPADDQKSVTGSCTNHITVLQT---SPGTEVYKSSRRNSLG-DFKSVSSCNRCKPA 199
           +SH               +H+  +     SP    Y + R N+   DF+SVSSCN     
Sbjct: 126 DSH---------------HHVYTMSDALRSPPLHFYTTGRSNNGSVDFRSVSSCND---- 166

Query: 200 VITSESENVVRSIRSSNIVVPLTDSHS-MVHSQPKSRGG-VLSWLFPRLKKKHKSE---N 254
               +     +S+++SN+VVPLTDSHS +V SQP++RGG V+SWLFP+LK+K KS    N
Sbjct: 167 -YNKQRGFDTKSLKNSNLVVPLTDSHSAVVSSQPRNRGGRVMSWLFPKLKRKQKSNSIFN 225

Query: 255 SPNRTE-SEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEY 313
           SP+RTE SEEVS+V KD G+   E LKRELMEAN SRDAAL +V EM+SS GEL +KL+Y
Sbjct: 226 SPSRTEKSEEVSEVMKDSGV---EKLKRELMEANRSRDAALTQVLEMKSSLGELSEKLQY 282

Query: 314 LEAYCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQ 373
           LE+YC+ LKKALR+A       + V          G+S  G   S MPVSEE MVEGFLQ
Sbjct: 283 LESYCDNLKKALREATEVVSQENNV----------GRS-SGKKNSEMPVSEEVMVEGFLQ 331

Query: 374 IVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQ 433
           IVSEARLS+KQF KTLV++I+E D TL+ N+N LLQP+ LS +SKYSK + YHLEA+I+Q
Sbjct: 332 IVSEARLSIKQFLKTLVSEIDEEDSTLIGNINTLLQPHNLSFTSKYSKIIQYHLEAIISQ 391

Query: 434 SLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFC 493
           S+YQDFENCVFQKNG PK+LDP+QDRQA F+SF SLRNLSWNEVL+KGTK+YS+EFS+FC
Sbjct: 392 SVYQDFENCVFQKNGKPKLLDPEQDRQANFSSFASLRNLSWNEVLKKGTKYYSDEFSRFC 451

Query: 494 DQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAH 553
           D+KMS IITTLNWTRPW EQ+LQAFFVAAKC+WLLHLLAFSFNP LGILRVE+NR F++ 
Sbjct: 452 DEKMSLIITTLNWTRPWSEQMLQAFFVAAKCVWLLHLLAFSFNPALGILRVEENREFESS 511

Query: 554 YMEDMLMDRQK---SHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKS 596
           +MEDM  DRQ+   S G +RVK+MVMPGFYVQD+VLRCKVLCRYKS
Sbjct: 512 FMEDMGADRQRSASSRGPARVKVMVMPGFYVQDRVLRCKVLCRYKS 557

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239939|ref|NP_196794.1| uncharacterized protein [Arabidopsis thaliana] gi|7630046|emb|CAB88254.1| putative protein [Arabidopsis thaliana] gi|22655166|gb|AAM98173.1| putative protein [Arabidopsis thaliana] gi|31711982|gb|AAP68347.1| At5g12900 [Arabidopsis thaliana] gi|47847287|dbj|BAD21351.1| IRK-interacting protein [Arabidopsis thaliana] gi|332004444|gb|AED91827.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 340/583 (58%), Positives = 416/583 (71%), Gaps = 49/583 (8%)

Query: 29  QEIQAAIAKAVELRALHSALMQ-GNSPAAN----NRFNSSSTSPVSRPVSQFSAHDYPVF 83
           +E + AIA  V+LRAL ++LMQ  +SP++N    N  +SS+ SP SRP+   SAHDYPVF
Sbjct: 12  REKEEAIANGVKLRALQASLMQMKSSPSSNYSLRNPSSSSAASPASRPLPNLSAHDYPVF 71

Query: 84  TPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSDYKKEILSSKKGLPSGLASF 143
           TPSYEDEPV+ +H   +   S TWDE  +   +G ++ LSD  K   S K  +       
Sbjct: 72  TPSYEDEPVSAFHH-KNLTLSETWDEDGVGLVDG-DTYLSDSYKTSTSRKTVM------- 122

Query: 144 ESHFCPADDQKSVTGSCTNHITVLQTSPGTEVYKSSRRNSLG-DFKSVSSCNRCKPAVIT 202
                P  D      + ++ +     SP    Y + R N    DF+SVSSCN        
Sbjct: 123 ----MPHQDSHHHVYTMSDALR----SPPLHFYTTGRSNCGSVDFRSVSSCND-----YN 169

Query: 203 SESENVVRSIRSSNIVVPLTDSHS-MVHSQPKSRGG-VLSWLFPRLKKKHKSE---NSPN 257
            +     +S++SSN+VVPLTDSHS +V SQP++RGG V+SWLFP+LKKK KS    NSP+
Sbjct: 170 KQKGFDTKSLKSSNLVVPLTDSHSAVVSSQPRNRGGRVMSWLFPKLKKKQKSNSIFNSPS 229

Query: 258 RTE-SEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEA 316
            TE SEEVS+V KD G   +E LKRELMEAN SRDAAL +VSEM+SS GEL +KL+YLE+
Sbjct: 230 ITEKSEEVSEVLKDSGS-GVEKLKRELMEANRSRDAALTQVSEMKSSLGELSEKLQYLES 288

Query: 317 YCEELKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVS 376
           YC+ LKKALR+A       +            G    G   S MPVSEE MVEGFLQIVS
Sbjct: 289 YCDNLKKALREATEVVSQENS-----------GGRSSGKKNSEMPVSEEVMVEGFLQIVS 337

Query: 377 EARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAVLYHLEAMINQSLY 436
           EARLS+KQF KTLV++I+E D TL+ N+N LLQP+ LS +SKYSK + YHLEA+I+QS+Y
Sbjct: 338 EARLSIKQFLKTLVSEIDEEDSTLIGNINTLLQPHNLSFTSKYSKIIQYHLEAIISQSVY 397

Query: 437 QDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQK 496
           QDFENCVFQKNG PK+LDP+QDRQA F+SF SLRNLSWNEVL+KGTK+YS+EFS+FCD+K
Sbjct: 398 QDFENCVFQKNGKPKLLDPEQDRQANFSSFASLRNLSWNEVLKKGTKYYSDEFSRFCDEK 457

Query: 497 MSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYME 556
           MS IITTLNWTRPW EQ+LQAFFVAAKC+WLLHLLAFSFNP LGILRVE+NR F++ +ME
Sbjct: 458 MSLIITTLNWTRPWSEQMLQAFFVAAKCVWLLHLLAFSFNPALGILRVEENREFESSFME 517

Query: 557 DMLMDRQK---SHGSSRVKIMVMPGFYVQDKVLRCKVLCRYKS 596
           DM  DRQ+   S G +RVK+MVMPGFYV D+VLRCKVLCRYKS
Sbjct: 518 DMGADRQRSALSRGPARVKVMVMPGFYVLDRVLRCKVLCRYKS 560

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	598
TAIR|locus:2182310	562	AT5G12900 "AT5G12900" [Arabido	0.685	0.729	0.627	1.4e-133
TAIR|locus:2034745	505	AT1G12330 "AT1G12330" [Arabido	0.565	0.669	0.363	1.4e-48
TAIR|locus:2050891	425	AT2G45260 "AT2G45260" [Arabido	0.489	0.689	0.241	1.3e-09
TAIR|locus:2086365	475	AT3G14870 "AT3G14870" [Arabido	0.543	0.684	0.252	1.6e-08
TAIR|locus:2101891	499	AT3G60680 "AT3G60680" [Arabido	0.461	0.553	0.237	1.3e-05
TAIR|locus:2154583	559	GIL1 "AT5G58960" [Arabidopsis	0.254	0.271	0.297	0.00028

TAIR|locus:2182310 AT5G12900 "AT5G12900" [Arabidopsis thaliana (taxid:3702)]

 Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
 Identities = 274/437 (62%), Positives = 320/437 (73%)

Query:   170 SPGTEVYKSSRRNSLG-DFKSVSSCNRCKPAVITSESEXXXXXXXXXXXXXPLTDSHS-M 227
             SP    Y + R N    DF+SVSSCN         +               PLTDSHS +
Sbjct:   141 SPPLHFYTTGRSNCGSVDFRSVSSCND-----YNKQKGFDTKSLKSSNLVVPLTDSHSAV 195

Query:   228 VHSQPKSRGG-VLSWLFPRLKKKHKSE---NSPNRTE-SEEVSQVFKDLGILSIETLKRE 282
             V SQP++RGG V+SWLFP+LKKK KS    NSP+ TE SEEVS+V KD G   +E LKRE
Sbjct:   196 VSSQPRNRGGRVMSWLFPKLKKKQKSNSIFNSPSITEKSEEVSEVLKDSGS-GVEKLKRE 254

Query:   283 LMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKL 342
             LMEAN SRDAAL +VSEM+SS GEL +KL+YLE+YC+ LKKALR+A           E  
Sbjct:   255 LMEANRSRDAALTQVSEMKSSLGELSEKLQYLESYCDNLKKALREATEVVSQ-----ENS 309

Query:   343 GNFPRRGKSIDGNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMD 402
             G     G+S  G   S MPVSEE MVEGFLQIVSEARLS+KQF KTLV++I+E D TL+ 
Sbjct:   310 G-----GRS-SGKKNSEMPVSEEVMVEGFLQIVSEARLSIKQFLKTLVSEIDEEDSTLIG 363

Query:   403 NLNVLLQPXXXXXXXXXXXXXXXHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQ 462
             N+N LLQP               HLEA+I+QS+YQDFENCVFQKNG PK+LDP+QDRQA 
Sbjct:   364 NINTLLQPHNLSFTSKYSKIIQYHLEAIISQSVYQDFENCVFQKNGKPKLLDPEQDRQAN 423

Query:   463 FASFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAA 522
             F+SF SLRNLSWNEVL+KGTK+YS+EFS+FCD+KMS IITTLNWTRPW EQ+LQAFFVAA
Sbjct:   424 FSSFASLRNLSWNEVLKKGTKYYSDEFSRFCDEKMSLIITTLNWTRPWSEQMLQAFFVAA 483

Query:   523 KCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDRQKS---HGSSRVKIMVMPGF 579
             KC+WLLHLLAFSFNP LGILRVE+NR F++ +MEDM  DRQ+S    G +RVK+MVMPGF
Sbjct:   484 KCVWLLHLLAFSFNPALGILRVEENREFESSFMEDMGADRQRSALSRGPARVKVMVMPGF 543

Query:   580 YVQDKVLRCKVLCRYKS 596
             YV D+VLRCKVLCRYKS
Sbjct:   544 YVLDRVLRCKVLCRYKS 560

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2034745 AT1G12330 "AT1G12330" [Arabidopsis thaliana (taxid:3702)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 130/358 (36%), Positives = 203/358 (56%)

Query:   251 KSENSPNRTESEE--VSQVFKDLGILSIE--TLKRELMEANESRDAALMEVSEM-RSSFG 305
             +S N+P+   S    +  +F+ L   S +  +    L   + S  AA     E  R +  
Sbjct:   120 ESHNNPSFISSPNLIIKSIFQSLTRRSPKPSSATAALPPRSSSSSAADASREEQWRLAVA 179

Query:   306 ELRQKLEYLEAYCEE-LKKALRQAATHAKDSHQVNEKLGNFPRRGKS-ID--GNGESLMP 361
             EL  KL       E+ + +A R  ++ A+   ++N KL  +    KS +D   N +  +P
Sbjct:   180 ELSHKLIQATKKKEDAVIEASRLKSSMAELEKKLN-KLEIYCHNLKSGLDECSNKKQSVP 238

Query:   362 VSEEA----MVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPXXXXXXX 417
             + ++     +++ FL  VSE+R S++   ++L +Q+      + + L++LLQP       
Sbjct:   239 IRKDGFNDRIIQQFLVSVSESRSSIRALSRSLASQLRTVGGKVYERLSLLLQPFDVKINS 298

Query:   418 XXXX--XXXXHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWN 475
                       +LEA+++++ ++DFE   FQKNGS +IL+P    ++ +ASF  L  L+W+
Sbjct:   299 FAKNPKSLIFYLEAILSRAFFEDFEAPGFQKNGSTRILNPIDRCESNYASFNVLMELTWD 358

Query:   476 EVLRKGTKFYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSF 535
             EVL +GTK +SEEFS+FCD+KMS +++ L+W R WPE LLQAFF A+K +WL+HLLA S 
Sbjct:   359 EVLSRGTKHFSEEFSRFCDRKMSDVVSMLSWNRAWPEPLLQAFFGASKSVWLVHLLANSV 418

Query:   536 NPPLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLCR 593
             NP L I RVE +  FD  YME+   +R KS     V+ MV PGFYV   V++CKV+C+
Sbjct:   419 NPGLQIFRVEKDDRFDPIYMEETGGERFKS----LVRAMVQPGFYVYGSVVKCKVVCK 472

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2050891 AT2G45260 "AT2G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 78/323 (24%), Positives = 133/323 (41%)

Query:   288 ESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSHQVNEKLG-NFP 346
             +SR AA  E+ E +S        ++  ++  +     + Q     ++++Q   KL  N  
Sbjct:   104 DSRLAA--EIQEQQSLLKTYEVMVKKFQSEIQNKDSEITQMLQKIEEANQKRLKLEKNLK 161

Query:   347 RRGKSID--GNGESLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNL 404
              RG S +   NG+  M   +    E ++     A  +V  F K L+  ++     L D+ 
Sbjct:   162 LRGMSTNEGSNGDGNMQFPD-LTTELYVSTYEAAAKAVHDFSKPLINMMKAAGWDL-DSA 219

Query:   405 NVLLQPXXXXXXXXXXXXXXXHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFA 464
                ++P                 E+ I Q ++  F+   F  N     +    D    F 
Sbjct:   220 ANSIEPDVVYAKRPHKKYA---FESYICQRMFSGFQQKNFSVNSESAAVMANDDTDTFFR 276

Query:   465 SFVSLRNLSWNEVLRKGTKFYSEEFSKFCDQKMSCIITTL-------NWT-RPW------ 510
              F++L+++   + L  GT   S  F  FC  K   ++          N   R +      
Sbjct:   277 QFLALKDMDPLDAL--GTNPDSN-FGIFCRSKYLLLVHPKMEASFFGNLDQRDYVTGGGH 333

Query:   511 PEQLL-QAFFVAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDMLMDR--QKSHG 567
             P     QAF   AK IW+LH LA+SF+P   I +V+    F   YME ++ +    +   
Sbjct:   334 PRTAFYQAFLKLAKSIWILHRLAYSFDPAAKIFQVKKGSEFSDSYMESVVKNIVVDEKEE 393

Query:   568 SSRVKIMVMPGFYVQDKVLRCKV 590
             + RV +MVMPGF++   V++ +V
Sbjct:   394 NPRVGLMVMPGFWIGGSVIQSRV 416

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2086365 AT3G14870 "AT3G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 93/369 (25%), Positives = 146/369 (39%)

Query:   251 KSENSPNRTESEE--VSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRS---SFG 305
             +S   PN  +  +  V    K L  L    LK++L + N  R   L E+ E+RS   ++ 
Sbjct:   110 QSPYDPNGIQKADNLVVAELKTLSELKQSFLKKQL-DPNPDRTLVLAEIQELRSVLKTYE 168

Query:   306 ELRQKLE-YLEAYCEE---LKKALRQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMP 361
              + +KLE  L+    E   LK+  +++ T  K    + ++L    +    +D N   L  
Sbjct:   169 IMGKKLECQLKLKDSEIIFLKEKFQESMTQNK---LMEKRLNQSGQLCNPLDHNLH-LSA 224

Query:   362 VSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPXXXXXXXXXXX 421
             VS    V      V     S++ F K +V Q++     + D    L+QP           
Sbjct:   225 VSSTHFVTYLHHTVK----SIRGFVKLMVEQMKLAAWDI-DMAAELIQPDVLYYKQDHKC 279

Query:   422 XXXXHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKG 481
                 H    I   + + F+   F    S K    ++D+   F  F  LR++   E L   
Sbjct:   280 FALEHYVCKI---MLEAFQLPYFSNESSKKT--SREDKAMFFERFTELRSMKPREYLASR 334

Query:   482 -----TKFYSEEFSKFCDQKMS-CIITTLNWTRP-----WPE-QLLQAFFVAAKCIWLLH 529
                   KF   ++ +    KM       L+         +PE  L  AF   AK +WLLH
Sbjct:   335 PKSRLAKFCRTKYLQLIHPKMEQAFFGHLHQRNQVTAGEFPETSLCTAFLEMAKRVWLLH 394

Query:   530 LLAFSFNPPLGILRVEDNRSFDAHYM----EDMLMDRQKSHGSSR----VKIMVMPGFYV 581
              LAFSF+P   I +V     F   YM    E+     ++   SS     V   V+PGF +
Sbjct:   395 CLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEPGVAFTVVPGFRI 454

Query:   582 QDKVLRCKV 590
                 ++C+V
Sbjct:   455 GKTTIQCEV 463

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2101891 AT3G60680 "AT3G60680" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 75/316 (23%), Positives = 130/316 (41%)

Query:   300 MRSSFGELRQKLEYLEAYCEELKKALRQAATHAKDSH--QVNEKLGNFPRRGKSIDGNGE 357
             + S   E + KL  LE     L     QA   AKD     +  KLG   +    +     
Sbjct:   191 LESRVQENQSKLRALETVSNRL-----QAEMDAKDLQVWSLRNKLGEIQKSTSKLSKRLS 245

Query:   358 SLMPVSEEAMVEGFLQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPXXXXXXX 417
             S   +     V  F  ++ +A  + ++F K L+  +E+    L D +   + P       
Sbjct:   246 SNSSLDVLLSVRVFESLLYDAFKATQKFTKILIELMEKAGWDL-DLVAKSVHPEVDYAKE 304

Query:   418 XXXXXXXXHLEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSL-RNLSWN- 475
                      L + +   +++ F+   F  N +      + +R +  +S   L +++S N 
Sbjct:   305 RHNRYA---LLSYVCLGMFRGFDGEGFDLNENDY---EESERSSVDSSLRELMQHVSSNP 358

Query:   476 -EVLRKGTKFYSEEFSKFCDQKM---------SCIITTLNWTRP----WPE--QLLQAFF 519
              E+L +        FS+FCD+K          S I + ++        W       ++F 
Sbjct:   359 MELLDRDKDC---AFSRFCDKKYHELIHPNMASSIFSNMDENEAVLSSWRSLSTFYESFV 415

Query:   520 VAAKCIWLLHLLAFSFNPPLGILRVEDNRSFDAHYMEDML---MDRQKSHGSSRVKI--M 574
               A  IW LH LA SF+P + I +VE    F   +ME++L    D++ S   +R K+   
Sbjct:   416 TMASSIWTLHKLALSFDPAVEIFQVESGVEFSIVFMENVLKRKQDKKFSMSPTRAKVGFT 475

Query:   575 VMPGFYVQDKVLRCKV 590
             V+PGF +   V++C+V
Sbjct:   476 VVPGFKIGCTVIQCQV 491

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005777 "peroxisome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

TAIR|locus:2154583 GIL1 "AT5G58960" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 50/168 (29%), Positives = 76/168 (45%)

Query:   427 LEAMINQSLYQDFENCVFQKNGS-PKILDPQQDRQAQFASFVSLRNLSWNEVLR-KGT-- 482
             LE+ I + ++Q F++  F  +GS   +++P Q R+  FA F  ++ +   E+L    T  
Sbjct:   372 LESYICRKIFQGFDHETFYMDGSLSSLINPDQYRRDCFAQFKDMKAMDPMELLGILPTCH 431

Query:   483 --KFYSEEFSKFCDQKMSCIITTLNWTRPW------PE-QLLQAFFVAAKCIWLLHLLAF 533
               KF S+++     QKM   +   +  R        P  Q    F   AK +WLLHLLAF
Sbjct:   432 FGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAGNHPRSQFYGEFLGLAKAVWLLHLLAF 491

Query:   534 SFNPPLGILRVEDNRSFDAHYMEDMLM--DRQKSHGSSRVKIMVMPGF 579
             S +P            F + YME ++   D +   G   V   V PGF
Sbjct:   492 SLDPSPSHFEANRGAEFHSQYMESVVRFSDGRVPAGQV-VGFPVCPGF 538

GO:0003674 "molecular_function" evidence=ND

GO:0009639 "response to red or far red light" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	598
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	0.001

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 24/80 (30%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 245 RLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSF 304
            L+++H+      + + EE+ ++ K L  L+ E L++EL E  ++++    E+S++ +  
Sbjct: 356 ELEERHELYEEA-KAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARI 414

Query: 305 GELRQKLEYLEAYCEELKKA 324
           GEL+++++ L+   EELKKA
Sbjct: 415 GELKKEIKELKKAIEELKKA 434

Length = 880

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	598
PF04859	131	DUF641: Plant protein of unknown function (DUF641)	98.62
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	90.45
PF08826	61	DMPK_coil: DMPK coiled coil domain like; InterPro:	90.32
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	87.5
PF12325	120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	85.71
PRK14151	176	heat shock protein GrpE; Provisional	84.53
PRK14150	193	heat shock protein GrpE; Provisional	83.7
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	83.58
PRK14158	194	heat shock protein GrpE; Provisional	82.88
PRK14140	191	heat shock protein GrpE; Provisional	81.65
PF08700	87	Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te	81.23
PRK14161	178	heat shock protein GrpE; Provisional	81.0
PRK14144	199	heat shock protein GrpE; Provisional	80.35
PF15290	305	Syntaphilin: Golgi-localised syntaxin-1-binding cl	80.22

>PF04859 DUF641: Plant protein of unknown function (DUF641); InterPro: IPR006943 This conserved region is found in a number of plant proteins of unknown function

Probab=98.62  E-value=5.3e-08  Score=90.75  Aligned_cols=73  Identities=22%  Similarity=0.313  Sum_probs=64.4

Q ss_pred             ccccccccccccCCCCCCCCccchhHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHH
Q 007566          238 VLSWLFPRLKKKHKSENSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAY  317 (598)
Q Consensus       238 ~~~~l~~~~~kk~~~~~s~~~ae~eE~q~llkt~~i~sie~L~~kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~  317 (598)
                      -||.+|-+-..+..|..+.+.++++|+|++|++|+|     +.+||+++++.||+   ||.       .|++||+++.+.
T Consensus        59 ~LK~~y~~~~~~~~~~~~~l~a~~~e~qsli~~yE~-----~~~kLe~e~~~Kds---ei~-------~Lr~~L~~~~~~  123 (131)
T PF04859_consen   59 ELKRRYRKKQSDPSPQVARLAAEIQEQQSLIKTYEI-----VVKKLEAELRAKDS---EID-------RLREKLDELNRA  123 (131)
T ss_pred             HHHHHHHcCCCCCCccccccccchHHHHHHHHHHHH-----HHHHHHHHHHHHHH---HHH-------HHHHHHHHHHHH
Confidence            467888877777776678899999999999999999     67899999999999   565       889999999999


Q ss_pred             HHHHHHHH
Q 007566          318 CEELKKAL  325 (598)
Q Consensus       318 ~~~Lkk~L  325 (598)
                      |..|+++|
T Consensus       124 n~~Lekrl  131 (131)
T PF04859_consen  124 NKSLEKRL  131 (131)
T ss_pred             HHHhhccC
Confidence            99999986

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=90.45  E-value=0.37  Score=45.35  Aligned_cols=50  Identities=18%  Similarity=0.270  Sum_probs=33.7

Q ss_pred             CceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEEe
Q 007566          538 PLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRC  588 (598)
Q Consensus       538 ~asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIKc  588 (598)
                      .+..|.+. |..|||.+||-|....+....+..|.=.|.|||++++.||+-
T Consensus       109 Gv~~i~~~-G~~FDp~~heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRp  158 (165)
T PF01025_consen  109 GVEEIEPV-GEPFDPNLHEAVETVPDPDKEPGTIVEVVRPGYRLGGRVLRP  158 (165)
T ss_dssp             TEEEE--T-SSB--TTTEEEEEEECSSSS-CTBEEEECC-EEEETTEEEE-
T ss_pred             CCEecCCC-CCCCCHHHheeheecCcCCCCcCeEEEEEecCEEECCEEeee
Confidence            45666676 999999999998653333344567888999999999999874

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure

Probab=90.32  E-value=1.8  Score=36.23  Aligned_cols=51  Identities=20%  Similarity=0.244  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007566          278 TLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQA  328 (598)
Q Consensus       278 ~L~~kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L~q~  328 (598)
                      +|..-|++++++|..--+|+...|.+--.+..+|++.+.+|.+|...|+..
T Consensus         1 elQsaL~~EirakQ~~~eEL~kvk~~n~~~e~kLqeaE~rn~eL~~ei~~L   51 (61)
T PF08826_consen    1 ELQSALEAEIRAKQAIQEELTKVKSANLAFESKLQEAEKRNRELEQEIERL   51 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            366778999999999888999999999999999999999999998887654

It plays a role in dimerisation []. ; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1WT6_D.

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=87.50  E-value=0.75  Score=45.74  Aligned_cols=50  Identities=18%  Similarity=0.274  Sum_probs=39.0

Q ss_pred             CceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEEe
Q 007566          538 PLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRC  588 (598)
Q Consensus       538 ~asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIKc  588 (598)
                      .+.-|.+ .|..|||.++|-|....+....+..|.-.+-.||++++.||+-
T Consensus       135 Gv~~i~~-~Ge~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRVLRp  184 (193)
T COG0576         135 GVEEIGP-EGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKLNDRVLRP  184 (193)
T ss_pred             CCEEeCC-CCCCCCHHHhhheeeecCCCCCCCeEEEEeecCeeeCCEeccc
Confidence            3556666 7999999999998654333444567888889999999999984

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []

Probab=85.71  E-value=7.1  Score=36.51  Aligned_cols=73  Identities=25%  Similarity=0.337  Sum_probs=53.8

Q ss_pred             CCCCccchhHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHH
Q 007566          254 NSPNRTESEEVSQVFKDLGILSIETLKRELMEANESRDAALMEVSEMRSSFGELR---QKLEYLEAYCEELKKALRQ  327 (598)
Q Consensus       254 ~s~~~ae~eE~q~llkt~~i~sie~L~~kL~~a~~~RDaa~~Ei~~lk~sl~eL~---~KL~~Le~~~~~Lkk~L~q  327 (598)
                      ..|+...++.+++-||..+. =+..++.+|..-...||.+-+||.++....++++   .++..|+....+|+.+..-
T Consensus        11 ~~~~~~~ve~L~s~lr~~E~-E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t   86 (120)
T PF12325_consen   11 GGPSVQLVERLQSQLRRLEG-ELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQT   86 (120)
T ss_pred             CCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56667789999999999987 6678999999999999999899887776665443   3344445555555554443

The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].

>PRK14151 heat shock protein GrpE; Provisional

Probab=84.53  E-value=1.5  Score=43.30  Aligned_cols=54  Identities=17%  Similarity=0.308  Sum_probs=39.3

Q ss_pred             CceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEE-eEEEe
Q 007566          538 PLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLR-CKVLC  592 (598)
Q Consensus       538 ~asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIK-crVYL  592 (598)
                      .+..+.. .|..|||.++|-|.........+..|.=.+-+||++++.||+ ++|-+
T Consensus       119 Gv~~i~~-~G~~FDP~~HEAv~~~~~~~~~~gtI~~v~qkGY~l~dRvLRpA~V~V  173 (176)
T PRK14151        119 QLEAVDP-HGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVV  173 (176)
T ss_pred             CCEEeCC-CCCCCCHHHhhcceeeCCCCCCcCeEEEEeeCCcEECCEEecCcEEEe
Confidence            3455555 699999999999865433333456777788999999999997 45544

>PRK14150 heat shock protein GrpE; Provisional

Probab=83.70  E-value=1.2  Score=44.34  Aligned_cols=53  Identities=15%  Similarity=0.388  Sum_probs=38.3

Q ss_pred             ceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEE-eEEEe
Q 007566          539 LGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLR-CKVLC  592 (598)
Q Consensus       539 asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIK-crVYL  592 (598)
                      +..+.+ .|..|||.++|-|.........+..|--.+-+||+++++||+ ++|-+
T Consensus       138 v~~i~~-~G~~FDP~~HeAv~~~~~~~~~~gtI~~v~q~GY~l~drvLRpA~V~V  191 (193)
T PRK14150        138 VEVVGP-VGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLLRPAMVMV  191 (193)
T ss_pred             CeeeCC-CCCCCCHhHcceeeeeCCCCCCcCEEEEEeeCCeEeCCEEecceEEEe
Confidence            444554 599999999999854333333356777888999999999997 45544

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=83.58  E-value=1.3  Score=41.08  Aligned_cols=50  Identities=20%  Similarity=0.293  Sum_probs=36.8

Q ss_pred             CceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEEe
Q 007566          538 PLGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRC  588 (598)
Q Consensus       538 ~asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIKc  588 (598)
                      .+..+.+. |..|||.++|-|.........+..|.=.+.|||++++.||+-
T Consensus        83 Gv~~i~~~-g~~FDp~~Heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRp  132 (137)
T cd00446          83 GVEKIEPE-GEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRP  132 (137)
T ss_pred             CCEEECCC-CCCCCHHHheeeeeecCCCCCcCEEEEEeecCeEECCEEecc
Confidence            34455553 679999999998553333344567888999999999999873

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PRK14158 heat shock protein GrpE; Provisional

Probab=82.88  E-value=2  Score=43.07  Aligned_cols=54  Identities=19%  Similarity=0.328  Sum_probs=38.4

Q ss_pred             ceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEEe-EEEe
Q 007566          539 LGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRC-KVLC  592 (598)
Q Consensus       539 asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIKc-rVYL  592 (598)
                      +..+....|..|||.+.|-|....+....+..|.-.+-+|+++++.||+- +|-+
T Consensus       138 v~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~V  192 (194)
T PRK14158        138 VTPVEAEKGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLRPAMVSV  192 (194)
T ss_pred             CEEecCCCCCCCChHHhhhheeecCCCCCcCEEEEEeeCCcEeCCEEeecceeEe
Confidence            33344345999999999988653333334567888899999999999973 4443

>PRK14140 heat shock protein GrpE; Provisional

Probab=81.65  E-value=1.7  Score=43.40  Aligned_cols=48  Identities=21%  Similarity=0.351  Sum_probs=35.6

Q ss_pred             cCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEEe-EEEe
Q 007566          545 EDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRC-KVLC  592 (598)
Q Consensus       545 ~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIKc-rVYL  592 (598)
                      ..|..|||.++|.|..-.+....+..|.-.+-+|++++++||+- +|-+
T Consensus       141 ~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~V  189 (191)
T PRK14140        141 AVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIRPSMVKV  189 (191)
T ss_pred             CCCCCCChHHhccceeeCCCCCCcCeEEEEeeCCeEeCCEEecCcEEEe
Confidence            46999999999998543333333567778889999999999973 4433

>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi

Probab=81.23  E-value=9.5  Score=32.14  Aligned_cols=28  Identities=32%  Similarity=0.440  Sum_probs=20.0

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 007566          295 MEVSEMRSSFGELRQKLEYLEAYCEELK  322 (598)
Q Consensus       295 ~Ei~~lk~sl~eL~~KL~~Le~~~~~Lk  322 (598)
                      +||..|+..+..|+..|..+...++.|.
T Consensus        58 ~~I~~m~~~~~~l~~~l~~l~~~~~~l~   85 (87)
T PF08700_consen   58 DEISSMENDLSELRNLLSELQQSIQSLQ   85 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5677777777777777777777776654

Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].

>PRK14161 heat shock protein GrpE; Provisional

Probab=81.00  E-value=2.6  Score=41.68  Aligned_cols=54  Identities=17%  Similarity=0.311  Sum_probs=38.9

Q ss_pred             eeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEE-eEEEee
Q 007566          540 GILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLR-CKVLCR  593 (598)
Q Consensus       540 sIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIK-crVYLs  593 (598)
                      ..+....|..|||.+.|-|....+....+..|.=.+-+|+++++.||+ ++|-++
T Consensus       121 ~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~v~q~GY~l~dRVLRpA~V~Va  175 (178)
T PRK14161        121 EEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDRLLRPATVQVV  175 (178)
T ss_pred             EEecCCCCCCCChHHhhhheeeCCCCCCcCEEEEEeeCCcEeCCEeecCceEEeC
Confidence            334344599999999999865433333456788889999999999997 445443

>PRK14144 heat shock protein GrpE; Provisional

Probab=80.35  E-value=2  Score=43.37  Aligned_cols=54  Identities=20%  Similarity=0.356  Sum_probs=39.4

Q ss_pred             ceeEEecCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEE-eEEEee
Q 007566          539 LGILRVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLR-CKVLCR  593 (598)
Q Consensus       539 asIFrV~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIK-crVYLs  593 (598)
                      +..+.. .|..|||.++|-|.........+..|.-.+-+|++++++||+ ++|-++
T Consensus       143 V~~I~~-~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vs  197 (199)
T PRK14144        143 VEQIDP-LGQTFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARVIVS  197 (199)
T ss_pred             CEEeCC-CCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEECCEEecccEEEec
Confidence            334443 599999999999865333334456788899999999999997 455554

>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp

Probab=80.22  E-value=18  Score=38.64  Aligned_cols=40  Identities=23%  Similarity=0.513  Sum_probs=28.0

Q ss_pred             HHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 007566          281 RELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKAL  325 (598)
Q Consensus       281 ~kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L  325 (598)
                      ++-+..++.||+   ||.+||.-|..+++.-  .|-+|++.+.+|
T Consensus        78 kes~~~l~dRet---EI~eLksQL~RMrEDW--IEEECHRVEAQL  117 (305)
T PF15290_consen   78 KESENRLHDRET---EIDELKSQLARMREDW--IEEECHRVEAQL  117 (305)
T ss_pred             HHHHHHHHhhHH---HHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence            333445668898   6888999999888764  556777766555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	598
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.4 bits (161), Expect = 2e-11
 Identities = 83/542 (15%), Positives = 150/542 (27%), Gaps = 167/542 (30%)

Query: 18  NENNNNNE------VSRQEIQAAIAKAV-ELR-----ALHSALMQGNSPAANNRFNSSS- 64
           +   N+N+      VSR +    + +A+ ELR      +    + G           +  
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VLG--------SGKTWV 166

Query: 65  TSPVSRPVSQFSAHDYPVFTPSYEDEPVTGYHQIHSKNPSGTWDEYALDGGNGNESTLSD 124
              V          D+ +F                       W    L+  N N      
Sbjct: 167 ALDVCLSYKVQCKMDFKIF-----------------------W----LNLKNCNSP---- 195

Query: 125 YKKEILSSKKGLPSGLASFESHFCPADDQ----KSVTGSCTNHITVLQTSPGTEVYKSSR 180
             + +L   + L   L   + ++    D     K    S    +  L  S     Y+   
Sbjct: 196 --ETVLEMLQKL---LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK---PYE--- 244

Query: 181 RNSLGDFKSVSSCN-------RCKPAVITSESENVVRSIRSSNIVVPLTDSHSMVHSQPK 233
            N L    +V +          CK  ++T+  + V   + ++       D HSM  +  +
Sbjct: 245 -NCLLVLLNVQNAKAWNAFNLSCK-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 234 SRGGVLSWL--------------FPRL------------------------KKKHKSENS 255
            +  +L +L               PR                         K     E+S
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 256 PNRTESEEVSQVFKDLGIL------SIETLKRELMEANESRDAALMEVSEMRSSFGELRQ 309
            N  E  E  ++F  L +           L   +       D  ++     + S  E + 
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL-IWFDVIKSDVMVVVNKLHKYSLVEKQP 421

Query: 310 K---LEYLEAYCEELKKALRQAATHAK--DSHQVNEKLGNFPRRGKSIDGN-----GESL 359
           K   +     Y E   K   + A H    D + + +   +       +D       G  L
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 360 MPVSEEAMVEGFLQIVSEAR-LSVK-QFCKTLVAQIEETDHTLMDNLNVLLQPYKLSLSS 417
             +     +  F  +  + R L  K +   T         +TL       L+ YK     
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ-----LKFYK----- 531

Query: 418 KYSKAVLYHLEAMINQSLYQDF-----ENCV------------FQKNGSPKILDPQQDRQ 460
            Y        E ++N     DF     EN +              ++ +  I + +  +Q
Sbjct: 532 PYICDNDPKYERLVNA--ILDFLPKIEENLICSKYTDLLRIALMAEDEA--IFE-EAHKQ 586

Query: 461 AQ 462
            Q
Sbjct: 587 VQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.3 bits (153), Expect = 2e-10
 Identities = 78/486 (16%), Positives = 149/486 (30%), Gaps = 131/486 (26%)

Query: 168 QTSPGTEVYKSSRRNSLGDFKSVSSCNRCKPAVITSESENVVRSIRSS-NIVVPLTDSHS 226
           Q S  T +Y   R     D +  +  N  +      +    +  +R + N+++       
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL-KLRQALLELRPAKNVLI-----DG 157

Query: 227 MVHS---------------QPKSRGGVLSWLFPRLKKKHKSEN------------SPNRT 259
           ++ S               Q K    +  WL   LK  +  E              PN T
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIF-WL--NLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 260 ESEEVSQVFKDLGILSIETLKRELMEANESRDAALM--EVSEMRSSFGELRQKLEYLEAY 317
              + S   K L I SI+   R L+++    +  L+   V           +        
Sbjct: 215 SRSDHSSNIK-LRIHSIQAELRRLLKSKPYENCLLVLLNVQN--------AKAWNAFNLS 265

Query: 318 CEELKKAL---RQAATHAKDSHQVNEKLGNFPRRGKSIDGNGESLMPVSEEAMVEGFLQI 374
           C    K L   R          QV + L        S+D +  +L P  +E      L+ 
Sbjct: 266 C----KILLTTRFK--------QVTDFLSAATTTHISLDHHSMTLTP--DEVK-SLLLKY 310

Query: 375 V--SEARLSVKQFCKT---LVAQIEETDHTLMDNLNVLLQPYKLSLSSKYSKAV---LYH 426
           +      L  ++   T    ++ I E   ++ D L      +K     K +  +   L  
Sbjct: 311 LDCRPQDLP-REVLTTNPRRLSIIAE---SIRDGLA-TWDNWKHVNCDKLTTIIESSLNV 365

Query: 427 LEAMINQSLYQDFENCVFQKNGSPKILDPQQDRQAQFASFVSLRNLSWNEVLRKGTKFYS 486
           LE    + ++      VF  +    I  P             L  + W +V++       
Sbjct: 366 LEPAEYRKMFDRLS--VFPPS--AHI--PTI----------LLSLI-WFDVIKSDVMVVV 408

Query: 487 EEFSKFC----DQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLH--LLAFSFNPPLG 540
            +  K+       K S I  ++         +     V  +  + LH  ++   +N P  
Sbjct: 409 NKLHKYSLVEKQPKESTI--SIP-------SIYLELKVKLENEYALHRSIVD-HYNIPKT 458

Query: 541 ------ILRVEDNRSFD--AHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLRCKVLC 592
                 I    D   +    H+++++             ++ +    ++  + L  K+  
Sbjct: 459 FDSDDLIPPYLDQYFYSHIGHHLKNIEHPE---------RMTLFRMVFLDFRFLEQKI-- 507

Query: 593 RYKSAA 598
           R+ S A
Sbjct: 508 RHDSTA 513

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 4e-05
 Identities = 51/304 (16%), Positives = 90/304 (29%), Gaps = 110/304 (36%)

Query: 359 LMPVSEEAMVEGF-LQIVSEARLSVKQFCKTLVAQIEETDHTLMDNLNVLLQPYKL--SL 415
           ++ V E+A V+ F  + V +   S+    K      EE DH +M   + +    +L  +L
Sbjct: 21  ILSVFEDAFVDNFDCKDVQDMPKSI--LSK------EEIDHIIMSK-DAVSGTLRLFWTL 71

Query: 416 SSKYSKAVLYHLEAMINQSLYQDFENCVFQKNGS---PKILDPQQDRQAQFASFVSLRNL 472
            SK              + + Q F   V + N       I   Q+        ++  R+ 
Sbjct: 72  LSK-------------QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 473 SWNEVLRKGTKFYSEEFSKFC---DQKMSCIITTLNWTRP-------------------- 509
            +N+          + F+K+     Q    +   L   RP                    
Sbjct: 119 LYNDN---------QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169

Query: 510 ----------------W--------PEQL---LQAFFVAAKCIWLLHLLAFSFNPPLGIL 542
                           W        PE +   LQ         W       S N     L
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW-TSRSDHSSNIK---L 225

Query: 543 RVEDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKV------LRCKVLC--RY 594
           R+   ++     +      + K + +    ++V+    VQ+        L CK+L   R+
Sbjct: 226 RIHSIQAELRRLL------KSKPYENC---LLVLLN--VQNAKAWNAFNLSCKILLTTRF 274

Query: 595 KSAA 598
           K   
Sbjct: 275 KQVT 278

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	598
3nmd_A	72	CGMP dependent protein kinase; leucine zipper, coi	91.39
1wt6_A	81	Myotonin-protein kinase; coiled-coil, kinase activ	89.81
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	87.68
3hnw_A	138	Uncharacterized protein; coiled-coil, structural g	81.41

>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}

Probab=91.39  E-value=0.58  Score=39.25  Aligned_cols=46  Identities=17%  Similarity=0.207  Sum_probs=38.5

Q ss_pred             HHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007566          280 KRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQA  328 (598)
Q Consensus       280 ~~kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L~q~  328 (598)
                      .++|+.++++||++   |.+...-|.+|+.+|++.+....+|+..|+..
T Consensus        21 i~eLq~~L~~K~eE---Lr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf   66 (72)
T 3nmd_A           21 LRDLQYALQEKIEE---LRQRDALIDELELELDQKDELIQMLQNELDKY   66 (72)
T ss_dssp             HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            48888888888884   55566668899999999999999999999876

>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}

Probab=89.81  E-value=1.1  Score=38.38  Aligned_cols=51  Identities=24%  Similarity=0.277  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007566          278 TLKRELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQA  328 (598)
Q Consensus       278 ~L~~kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L~q~  328 (598)
                      +|.--|+++++.|+.--+|+.+.|.+.-.+..||++.+.+|.+|...|+.-
T Consensus        14 eLQSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l   64 (81)
T 1wt6_A           14 ELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQL   64 (81)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            577788899999999778999999999999999999999998887766554

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=87.68  E-value=0.56  Score=36.89  Aligned_cols=32  Identities=28%  Similarity=0.406  Sum_probs=28.3

Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007566          296 EVSEMRSSFGELRQKLEYLEAYCEELKKALRQ  327 (598)
Q Consensus       296 Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L~q  327 (598)
                      |+..||..+.+|++|++.|...+.+|+++|.+
T Consensus        20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~   51 (53)
T 2yy0_A           20 EIELLRLELAEMKEKYEAIVEENKKLKAKLAQ   51 (53)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            67788888999999999999999999998864

>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}

Probab=81.41  E-value=4.8  Score=36.98  Aligned_cols=44  Identities=20%  Similarity=0.223  Sum_probs=26.8

Q ss_pred             HHHHHHhhhhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007566          282 ELMEANESRDAALMEVSEMRSSFGELRQKLEYLEAYCEELKKALRQA  328 (598)
Q Consensus       282 kL~~a~~~RDaa~~Ei~~lk~sl~eL~~KL~~Le~~~~~Lkk~L~q~  328 (598)
                      +|+++++..+.   |+..+|+.+..++.|++.++....+|++.+.+.
T Consensus        79 ~L~~~l~~~~k---E~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l  122 (138)
T 3hnw_A           79 SLSLDIENKDK---EIYDLKHELIAAQIKAESSAKEIKELKSEINKY  122 (138)
T ss_dssp             HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444445555   466666666666666666666666666666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	598
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	92.45

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=92.45  E-value=0.041  Score=42.26  Aligned_cols=51  Identities=16%  Similarity=0.243  Sum_probs=38.5

Q ss_pred             cCCCccchhhhhhhccccccCCCCCeEEEEeeCCceeCCeEEE-eEEEeeec
Q 007566          545 EDNRSFDAHYMEDMLMDRQKSHGSSRVKIMVMPGFYVQDKVLR-CKVLCRYK  595 (598)
Q Consensus       545 ~rG~~Fs~vYMEsVv~~~~~~~~~~~VgftV~PGFkVg~tVIK-crVYLs~~  595 (598)
                      ..|..|||.+||.|....+....+..|.-.+-+||+++++||+ ++|-++.+
T Consensus         6 ~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~   57 (59)
T d1dkga1           6 ETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA   57 (59)
T ss_dssp             CCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEEC
T ss_pred             CCCCCCCHHHceEeeEecCCCCCCCEEEEEEeCCcEECCEEeeccEEEEecC
Confidence            4589999999999865444334456777799999999999998 56665543