Citrus Sinensis ID: 007633
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU40 | 587 | Monocopper oxidase-like p | no | no | 0.952 | 0.965 | 0.659 | 0.0 | |
| Q9FHN6 | 592 | Monocopper oxidase-like p | no | no | 0.946 | 0.951 | 0.605 | 0.0 | |
| Q8VXX5 | 589 | Monocopper oxidase-like p | no | no | 0.949 | 0.959 | 0.618 | 0.0 | |
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.863 | 0.926 | 0.478 | 1e-141 | |
| P29162 | 554 | L-ascorbate oxidase homol | N/A | no | 0.900 | 0.967 | 0.475 | 1e-139 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.870 | 0.894 | 0.301 | 4e-57 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.833 | 0.898 | 0.301 | 9e-56 | |
| Q40588 | 578 | L-ascorbate oxidase OS=Ni | N/A | no | 0.835 | 0.859 | 0.276 | 5e-51 | |
| P14133 | 587 | L-ascorbate oxidase OS=Cu | N/A | no | 0.835 | 0.846 | 0.283 | 6e-51 | |
| Q0IQU1 | 564 | Laccase-22 OS=Oryza sativ | no | no | 0.796 | 0.840 | 0.289 | 3e-45 |
| >sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/575 (65%), Positives = 453/575 (78%), Gaps = 8/575 (1%)
Query: 12 VSFFFILLWL----LNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVT 67
+ F ILL + ++ CF DPY FY++ +SY+TASPLG QQVI ING+FPGP +NVT
Sbjct: 1 MDLFKILLLVFFVNISFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVT 60
Query: 68 TNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGS 127
TN N+VVNV+N LDE LLL WNG+Q R+ SWQDGVLGTNCPIP WNWTY+FQVKDQIGS
Sbjct: 61 TNENLVVNVRNKLDEGLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGS 120
Query: 128 FFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187
FFYFPSL FQRA+GG+G ++N R +IP+PF+ PDGDIT+ I DWY ++H LRK +++G
Sbjct: 121 FFYFPSLHFQRASGGFGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDG 180
Query: 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN 247
DLG+PDG+LING GPYRY+ +V DGI ++ I V PGKTYRLRV NVGISTSLNFRIQ
Sbjct: 181 KDLGMPDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQG 240
Query: 248 HNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKV 307
HNL+L E+EGSYTVQQNYT++DIHVGQS+SFLVT DQNASSDYYIVAS R VN + W +V
Sbjct: 241 HNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRV 300
Query: 308 TGVAILHYSNSLGPASGPLP-DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQ 366
TGV IL Y+NS G A G LP P + +D FSMNQARSIRWNVSA ARPNPQGSFKYG
Sbjct: 301 TGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGS 360
Query: 367 ITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR 426
I VTDVYV+ N P I GK RTTLNGIS+ PSTP+ LA + + YKLDFP + ++
Sbjct: 361 INVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKLDFPKRPLTG 420
Query: 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWD 486
KV TS+INGTY+GFME++ QNNDT +QSYHM GYAFFVVGMD+G WTENSRGTYNKWD
Sbjct: 421 PAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWD 480
Query: 487 GVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINP-EIDKSAPLL 545
G+ARST QV+PGAW+AIL+ LDN G WNLR ENLD+WYLGQE YV V+NP E +K+
Sbjct: 481 GIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGH 540
Query: 546 PDNAIYCGLLSSLQKDQAQRINFSGAPSVVDASIT 580
PDN +YCG LS LQK Q+++ S + S+ S++
Sbjct: 541 PDNVLYCGALSKLQK--PQKVSSSASKSIGFTSLS 573
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May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/570 (60%), Positives = 445/570 (78%), Gaps = 7/570 (1%)
Query: 25 CFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPL 84
F GDPYV YD+T+SY+TASPLG QQVI +NG+FPGP++N TTN+NV VNV N LDEPL
Sbjct: 21 SFAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDEPL 80
Query: 85 LLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYG 144
LLTW GVQ R+NSWQDGVLGTNCPIP WN+TY FQ+KDQIGS+FY PSL+FQRA+GG+G
Sbjct: 81 LLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFG 140
Query: 145 GIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPY 204
+IINNRD++P+PF PDG+I I DWYT++H LR+ +++G +LG+PDG+LING GP+
Sbjct: 141 ALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLINGKGPF 200
Query: 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264
+Y+++ VPDGI ++ +NV+PGKTYR+RVHNVGISTSLNFRIQNH LLL+ETEG YT Q N
Sbjct: 201 KYNSS-VPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMN 259
Query: 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASG 324
+T+ D+HVGQS+SFLVT DQNA+SDYYIVAS RFVN + W +VTGV ILHYSNS GPASG
Sbjct: 260 FTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASG 319
Query: 325 PLP-DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
PLP + + +MNQ R+I+ N SA ARPNPQGSF YGQI +T Y++ + P I
Sbjct: 320 PLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKI 379
Query: 384 EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYK-LMSRAPKVDTSLINGTYKGF 442
GK R TLNGIS++ PSTP+ LA + G Y LDFP + L + P++ +S+IN TYKGF
Sbjct: 380 NGKLRATLNGISFVNPSTPMRLADDHKVKGDYMLDFPDRPLDEKLPRLSSSIINATYKGF 439
Query: 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502
+++IFQNNDT +QS+H+DGYAF+VV MDFG+W+E+ +YN WD VARST +V+PGAWTA
Sbjct: 440 IQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTA 499
Query: 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPL-LPDNAIYCGLLSSLQKD 561
+L+ LDN G+WN+R ENLD WYLGQE Y+ +INPE + S + P+N +YCG L ++QK+
Sbjct: 500 VLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCGALQAMQKE 559
Query: 562 QAQRINFSGAPSVVDASITVLLAFVIALFS 591
Q S S+ + + ++ + ++ L S
Sbjct: 560 QHHS---SATKSMTNGQLILIFSMMMVLLS 586
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/572 (61%), Positives = 448/572 (78%), Gaps = 7/572 (1%)
Query: 8 CSSCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVT 67
CS SF L F DP+V YD+ +SY+TASPLG QQVI +NGQFPGP+LN T
Sbjct: 5 CSLLASFLLCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNAT 64
Query: 68 TNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGS 127
TN+NVVVNV N LDEPLLLTW G+Q R+NSWQDGVLGTNCPIP WN+TYQFQVKDQIGS
Sbjct: 65 TNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGS 124
Query: 128 FFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187
FFY PSL+FQRA+GG+G I+INNRD+IP+PF PDG++ I DWYT+ HK LR+ +++G
Sbjct: 125 FFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSG 184
Query: 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN 247
+LG+PDG+LING GPY+Y+++ VPDGI Y +VEPGKTYR+RVHNVGISTSLNFRIQN
Sbjct: 185 KELGMPDGVLINGKGPYKYNSS-VPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQN 243
Query: 248 HNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKV 307
H+LLLVETEG YT Q N+T+ D+HVGQS+SFLVT DQ+A+SDYYIVAS RFVN + W +V
Sbjct: 244 HSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRV 303
Query: 308 TGVAILHYSNSLGPASGPLPDPPNAYDTYFS-MNQARSIRWNVSAGAARPNPQGSFKYGQ 366
TGVAILHYSNS GP SGPLP P + +S M+Q ++IR N SA ARPNPQGSF YGQ
Sbjct: 304 TGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQ 363
Query: 367 ITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR 426
I +T+ Y++ + P +I G R TLNGIS++ PSTP+ LA + + GAYKLDFP + +R
Sbjct: 364 INITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPFNR 423
Query: 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWD 486
++D S+IN TYKGF++++FQNNDT +QS+H+DGY+FFVVGMDFG+W+E+ +G+YN WD
Sbjct: 424 PLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWD 483
Query: 487 GVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPL-L 545
++RST +V+PG WTA+L+ LDN G+WN+R ENLD WYLG+E Y+ + NPE D +
Sbjct: 484 AISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDP 543
Query: 546 PDNAIYCGLLSSLQKDQAQRINFSGAPSVVDA 577
PDN +YCG L +LQK+Q + S A S+++
Sbjct: 544 PDNVLYCGALKNLQKEQ----HHSAATSILNG 571
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/541 (47%), Positives = 363/541 (67%), Gaps = 27/541 (4%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTW 88
DPY + W ++Y TASPLG QQVI INGQFPGP +N T+N NV++NV N+LDEP LLTW
Sbjct: 25 DPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTW 84
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIII 148
NG+QHRKN WQDG GT CPI G N+TY FQ KDQIGS+FY+P+ RAAGGYGG+ +
Sbjct: 85 NGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLRV 144
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
N+R +IP+P+A P+ D T+ I DWYTKSH +L+K ++ G +G PDGI+ING
Sbjct: 145 NSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVING-------K 197
Query: 209 AIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268
+ DG L ++PGKTYR+R+ NVG+ TS+NFRIQNH + LVE EGS+ +Q +Y ++
Sbjct: 198 SGKGDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSL 257
Query: 269 DIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPD 328
D+HVGQ F +VT +Q DYY+VAS RF+ + +T +L Y GPAS LP
Sbjct: 258 DVHVGQCFGTIVTANQEP-KDYYMVASSRFLKTV----ITTTGLLRYEGGKGPASSQLPA 312
Query: 329 PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWR 388
P + +S+NQ RS RWN++A AARPNPQGS+ YG+I +T ++N + ++GK R
Sbjct: 313 GPVGWA--WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKLR 369
Query: 389 TTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP--------KVDTSLINGTYK 440
LNG+S+ P TPL LA+ F I F Y ++ P K++ +++N T++
Sbjct: 370 FALNGVSHTEPETPLKLAEYFGISDKV---FKYDTITDDPTPEQIKNIKIEPNVLNITHR 426
Query: 441 GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAW 500
F+E++F+N++ +VQS+H+DGY+FF V ++ G WT R YN D V+R T QV+P W
Sbjct: 427 TFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCW 486
Query: 501 TAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSLQ 559
AIL+ DN G+WN+R+EN + YLGQ++Y +V++PE + +P+ ++ CGL+ +
Sbjct: 487 AAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKNTP 546
Query: 560 K 560
K
Sbjct: 547 K 547
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Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/562 (47%), Positives = 363/562 (64%), Gaps = 26/562 (4%)
Query: 7 LCSSCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNV 66
+ S V+F +LL L G DPY++++W ++Y T +PLG QQ I INGQFPGP +N
Sbjct: 1 MGSGKVTFVALLLCLSVGVIAEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINC 60
Query: 67 TTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126
T+N N+VVNV N+LDEP L TWNGVQHRKNSWQDG GT CPI G N+TY+FQVKDQIG
Sbjct: 61 TSNNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIG 120
Query: 127 SFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN 186
S+ YFP+ RAAGGYG + +++R +IP+PF P + +F+ DWY K HK L+K ++
Sbjct: 121 SYSYFPTTALHRAAGGYGALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKILDG 180
Query: 187 GVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQ 246
G +G PDGI+ING + A P L +E GKTYR R N+G+ +S+N R Q
Sbjct: 181 GRTIGRPDGIIINGKSA-KVGEAKEP------LFTMEAGKTYRYRFCNLGMRSSVNIRFQ 233
Query: 247 NHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNK 306
H + LVE EGS+TVQ Y ++D+HVGQ S LVT DQ DYY+V S RF+ +
Sbjct: 234 GHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEP-KDYYLVVSSRFLKQA---- 288
Query: 307 VTGVAILHYSNSLGPASGPLPDPP--NAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKY 364
++ VAI+ Y+N GPAS LP PP N +SMNQ RS RWN++A AARPNPQGS+ Y
Sbjct: 289 LSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHY 348
Query: 365 GQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424
GQI +T I N ++ + GK R LNGIS+ TPL L + F GA F Y LM
Sbjct: 349 GQINITRTIKIFNSMSQ-VGGKLRYGLNGISHTNGETPLKLVEYF---GATNKAFKYDLM 404
Query: 425 SRAPKVD-------TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTEN 477
+ D T++ N TY+ F+EIIF+N++ T+++YH+DGY+FF V ++ G W+
Sbjct: 405 ADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPE 464
Query: 478 SRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537
R YN DG++R+ QV+P +W AI++ DNAG+WNLR+E + YLG+++Y +V++P
Sbjct: 465 KRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPS 524
Query: 538 ID-KSAPLLPDNAIYCGLLSSL 558
+ +PDN CG++ L
Sbjct: 525 RSLRDEYNIPDNHPLCGIVKGL 546
|
Probable oxidoreductase that may be involved in pollen tube growth. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 175/580 (30%), Positives = 283/580 (48%), Gaps = 62/580 (10%)
Query: 12 VSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWN 71
+ FFF L+ G Y W + Y+ +P ++ V+GINGQFPGP +
Sbjct: 14 ILFFFGLILAFGISSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDT 73
Query: 72 VVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFF 129
VVV + N L E +++ W+G+ R W DG + C I G + Y F V D G+FF
Sbjct: 74 VVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFF 132
Query: 130 YFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKS-HKKLRKDVENGV 188
Y L QR+AG YG +I++ PF DG+I + +SDW+ +S HK+ +
Sbjct: 133 YHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPI 191
Query: 189 D-LGVPDGILINGLGPY------RYDAAIVPDGI-------PYQLINVEPGKTYRLRVHN 234
+G P IL+NG G + +YD+ + P + PY + +V P KTYR+R+ +
Sbjct: 192 RWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSEPCAPY-IFHVMPKKTYRIRIAS 250
Query: 235 VGISTSLNFRIQNHNLLLVETEGSYTVQQNYT-NMDIHVGQSFSFLVTTDQNASSDYYIV 293
+LNF I NH LL+VE +G+Y VQ YT ++DI+ G+S+S L+TTDQN S +Y++
Sbjct: 251 TTALAALNFAIGNHPLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVS 309
Query: 294 ASPRFVNSSEWNKVTGVAILHY---SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVS 350
R N G+ +L+Y S S P S P P+ P A+D + +++++ + ++
Sbjct: 310 VGTR---GRHPNTPPGLTLLNYLPNSVSKLPTSPP-PETP-AWDDF---DRSKNFTYRIT 361
Query: 351 AGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFN 410
A P P ++ + L +I G + +N +S P TP + A +FN
Sbjct: 362 AAMGSPKPP--------VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFN 413
Query: 411 IPGAYKLDFPYKLMSRAPKVD-------TSLINGTYK----GFMEIIFQN------NDTT 453
+ A+ + P ++ +D T + NG Y+ +++I QN N +
Sbjct: 414 LLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSE 473
Query: 454 VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513
+ +H+ G+ F+V+G G +T + N + R+T +FP WTAI DN G+W
Sbjct: 474 IHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVW 533
Query: 514 NLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553
++G + V+ E + +P A+ CG
Sbjct: 534 AFHCHIEPHLHMG----MGVVFAEGVEKVGRIPTKALACG 569
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 275/558 (49%), Gaps = 62/558 (11%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQ 92
Y W + Y+ +P ++ V+GINGQFPGP + +VVV + N L E +++ W+G+
Sbjct: 6 YKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGIL 65
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
R W DG + C I G + Y F V D G+FFY L QR+AG YG +I++
Sbjct: 66 QRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124
Query: 152 DVIPLPFAVPDGDITIFISDWYTKS-HKKLRKDVENGVD-LGVPDGILINGLGPY----- 204
PF DG+I + +SDW+ +S HK+ + +G P IL+NG G +
Sbjct: 125 QGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIA 183
Query: 205 -RYDAAIVPDGI-------PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256
+YD+ + P + PY + +V P KTYR+R+ + +LNF I NH LL+VE +
Sbjct: 184 AKYDSNLEPCKLKGSESCAPY-IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD 242
Query: 257 GSYTVQQNYT-NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
G+Y VQ YT ++DI+ G+S+S L+TTDQN S +Y++ R + N G+ +L+Y
Sbjct: 243 GNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR---ARHPNTPPGLTLLNY 298
Query: 316 ---SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDV 372
S S P S P P A+D + +++++ + ++A P P F +
Sbjct: 299 LPNSVSKLPTSPPPQTP--AWDDF---DRSKNFTYRITAAMGSPKPPVKF--------NR 345
Query: 373 YVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVD- 431
+ L +I G + +N +S P TP + A ++N+ A+ + P ++ +D
Sbjct: 346 RIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT 405
Query: 432 ------TSLINGTYK----GFMEIIFQN------NDTTVQSYHMDGYAFFVVGMDFGVWT 475
T + NG Y+ +++I QN N + +H+ G+ F+V+G G ++
Sbjct: 406 PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS 465
Query: 476 ENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVIN 535
+ N + R+T +FP WTAI DN G+W ++G + V+
Sbjct: 466 AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVVF 521
Query: 536 PEIDKSAPLLPDNAIYCG 553
E + +P A+ CG
Sbjct: 522 AEGVEKVGRIPTKALACG 539
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 264/567 (46%), Gaps = 70/567 (12%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQ 92
+ W + Y+ SP G++ V+GINGQFPGP + V V++ N L E +++ W+G++
Sbjct: 33 FKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIR 92
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
W DG + C I G + Y+F+V D+ G++FY QR+AG YG +I+
Sbjct: 93 QIGTPWADGTAAISQCAINPGETFLYRFKV-DKAGTYFYHGHYGMQRSAGLYGSLIVEVG 151
Query: 152 DVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD--LGVPDGILINGLGPY----- 204
+ PF DG+ + +SDW+ K + D+ + +G P +L+NG G Y
Sbjct: 152 EGEKEPFHY-DGEFNLLLSDWWHKGSHEQEVDLSSNPLRWIGEPQTLLLNGRGQYNCSLA 210
Query: 205 -RYDAAIVPD-----GIPY--QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256
R+ +P G Y Q++ V P K YRLRV + SL+ I H +++VE +
Sbjct: 211 ARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVVVEAD 270
Query: 257 GSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYS 316
G+Y + +MDI+ G+S+S L TDQ+ + +Y+I + V E G+ +L+Y
Sbjct: 271 GNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISIN---VRGREPKTPQGLTLLNY- 326
Query: 317 NSLGPASGPLPD-PPNAYDTYFSMNQARSIRWNVSA--GAARPNPQGSFK---------- 363
L ++ P PP + N ++S + A G+ +P PQ +
Sbjct: 327 --LPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQNKI 384
Query: 364 --YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPY 421
Y + + +V ++L P +L G R +N PP P + D Y
Sbjct: 385 DGYTKWAINNVSLVL--PTQLYLGSIRYGINAFDTKPP------------PDNFPKD--Y 428
Query: 422 KLMSRAPKVDTSLINGTY----KGFMEIIFQNND------TTVQSYHMDGYAFFVVGMDF 471
++ +AP +++ NG Y ++II QN + + + +H+ G+ F+V+G
Sbjct: 429 DVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGE 488
Query: 472 GVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYV 531
G ++E +N + R+T +FP WTA+ DN G+W ++G +
Sbjct: 489 GKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMG----M 544
Query: 532 NVINPEIDKSAPLLPDNAIYCGLLSSL 558
VI E +P A+ CGL +
Sbjct: 545 GVIFAEGVHLVKKIPKEALACGLTGKM 571
|
May be involved in a redox system involving ascorbic acid. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 263/558 (47%), Gaps = 61/558 (10%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQ 92
Y W + Y+ SP + V+GING+FPGP + VVV + N L E +++ W+G+
Sbjct: 41 YKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGIL 100
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
R W DG + C I G +TY+F V D+ G++FY L QR+AG YG +I++
Sbjct: 101 QRGTPWADGTASISQCAINPGETFTYRFVV-DKAGTYFYHGHLGMQRSAGLYGSLIVDPP 159
Query: 152 DVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD--LGVPDGILINGLGPYRYDAA 209
+ PF D +I + +SDW+ +S K + + +G P ILING G ++D +
Sbjct: 160 EGRSEPFHY-DEEINLLLSDWWHQSVHKQEVGLSSKPMRWIGEPQSILINGKG--QFDCS 216
Query: 210 IV---------------PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVE 254
I P+ +++V+P KTYR+R+ + SLNF I NH LL+VE
Sbjct: 217 IAAKYNQGLKQCELSGKEKCAPF-ILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVE 275
Query: 255 TEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILH 314
+G+Y +++DI+ G+S+S L+TTDQN +Y++ V + G+ +L+
Sbjct: 276 ADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIG---VRARLPKTPPGLTLLN 332
Query: 315 YSNSLGPASGPLP-DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVY 373
Y L ++ LP PP + +++++ + + A P P + +
Sbjct: 333 Y---LPNSASKLPISPPPETPHWEDFDRSKNFTFRIFAAMGSPKPPVRY--------NRR 381
Query: 374 VILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP-------YKLMSR 426
+ L I G + +N +S P TP + A + + A+ + P Y + +
Sbjct: 382 LFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNP 441
Query: 427 APKVDTSLINGTYKGFM----EIIFQN------NDTTVQSYHMDGYAFFVVGMDFG-VWT 475
P +T+ NG YK M ++I QN N + + +H+ G+ F+V+G G +
Sbjct: 442 PPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYA 501
Query: 476 ENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVIN 535
N + R+T +FP WTAI DN G+W ++G + V+
Sbjct: 502 PEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVVF 557
Query: 536 PEIDKSAPLLPDNAIYCG 553
E ++P A+ CG
Sbjct: 558 AEGVHMVGMIPPKALACG 575
|
May be involved in a redox system involving ascorbic acid. Cucumis sativus (taxid: 3659) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 236/508 (46%), Gaps = 34/508 (6%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
Y + + + L + ++ +NG+FPGP L NV+V V N + + + W+GV+
Sbjct: 33 YKFNVVMRNMTRLCSTKPILTVNGKFPGPTLYAREGDNVLVKVVNHVAHNVTIHWHGVRQ 92
Query: 94 RKNSWQDG-VLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152
+ W DG T CPI G ++ Y F + Q G+ + +++ RA +G I+I +
Sbjct: 93 IRTGWYDGPAYITQCPIQPGSSFLYNFTITGQRGTLLWHAHINWLRATV-HGAIVILPKL 151
Query: 153 VIPLPFAVPDGDITIFISDWYTK-SHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIV 211
+P PF P + I + +W+ + + + + ++ GV + D ING + A
Sbjct: 152 GVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQLGVGPNISDSHTINGHPGPLSECASS 211
Query: 212 PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271
DG ++VE GKTY LR+ N ++ L F++ H L +VE + YT + I
Sbjct: 212 QDGFK---LSVENGKTYMLRIINAALNDDLFFKVAGHELTVVEVDAVYTKPFKTDTLLIT 268
Query: 272 VGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGP--ASGPLPDP 329
GQ+ + LV +Q A Y + SP + + TG A LHY+N++ AS L P
Sbjct: 269 PGQTTNVLVRANQGAGR-YLLSVSPFMDAPVQVDNKTGTATLHYANTVSSSMASLTLVKP 327
Query: 330 PNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG-KWR 388
P T+ S+ S PQ +TV V +N I G +
Sbjct: 328 PPQNATHIVSKFTDSLHSLNSKEYPANVPQTVDHSLLLTVG---VGVNPCPSCINGTRVV 384
Query: 389 TTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR------APKVDTSLINGT---- 438
T+N ++++ PSTP++ A +NIPG + DFP + + PK + +NGT
Sbjct: 385 GTINNVTFIMPSTPILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPK-NLQTMNGTRVYR 443
Query: 439 --YKGFMEIIFQNNDTTVQS-----YHMDGYAFFVVGMDFGVWT-ENSRGTYNKWDGVAR 490
Y ++++ Q DT + S H+ G+ FFVVG G + S T+N D + R
Sbjct: 444 LPYNASVQVVLQ--DTGIISPESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIER 501
Query: 491 STTQVFPGAWTAILVYLDNAGIWNLRAE 518
+T V G WTAI DN G+W +
Sbjct: 502 NTIGVPTGGWTAIRFRSDNPGVWFMHCH 529
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| 359494755 | 595 | PREDICTED: monocopper oxidase-like prote | 0.961 | 0.961 | 0.837 | 0.0 | |
| 255572658 | 596 | multicopper oxidase, putative [Ricinus c | 0.946 | 0.944 | 0.846 | 0.0 | |
| 224132042 | 554 | predicted protein [Populus trichocarpa] | 0.919 | 0.987 | 0.863 | 0.0 | |
| 449462469 | 595 | PREDICTED: monocopper oxidase-like prote | 0.974 | 0.974 | 0.808 | 0.0 | |
| 356524453 | 595 | PREDICTED: monocopper oxidase-like prote | 0.951 | 0.951 | 0.824 | 0.0 | |
| 334188257 | 621 | protein SKU5 similar 3 [Arabidopsis thal | 0.956 | 0.916 | 0.738 | 0.0 | |
| 357504891 | 630 | Monocopper oxidase-like protein SKU5 [Me | 0.954 | 0.901 | 0.755 | 0.0 | |
| 297795505 | 556 | predicted protein [Arabidopsis lyrata su | 0.919 | 0.983 | 0.764 | 0.0 | |
| 224285319 | 591 | unknown [Picea sitchensis] | 0.956 | 0.962 | 0.723 | 0.0 | |
| 414866853 | 691 | TPA: hypothetical protein ZEAMMB73_67279 | 0.946 | 0.814 | 0.747 | 0.0 |
| >gi|359494755|ref|XP_002269725.2| PREDICTED: monocopper oxidase-like protein SKU5-like [Vitis vinifera] gi|297742831|emb|CBI35585.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/573 (83%), Positives = 522/573 (91%), Gaps = 1/573 (0%)
Query: 23 NGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE 82
N F DP+VFYDW +SY+TASP G KQQVI +NGQFPGPILNVTTNWNVV+N+KNDLDE
Sbjct: 21 NYAFAEDPFVFYDWKVSYITASPFGVKQQVIAVNGQFPGPILNVTTNWNVVINIKNDLDE 80
Query: 83 PLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGG 142
PLLLTWNG+QHRKNSWQDGVLGTNCPIPAGWNWTY+FQVKDQIGSFFYF SL+FQRA+GG
Sbjct: 81 PLLLTWNGIQHRKNSWQDGVLGTNCPIPAGWNWTYEFQVKDQIGSFFYFASLNFQRASGG 140
Query: 143 YGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLG 202
YGGI+INNR+VIP+PF PDGDITIFI DWYTKSHK+LRKDVENG+DLGVPD IL NGLG
Sbjct: 141 YGGIVINNRNVIPVPFGTPDGDITIFIGDWYTKSHKELRKDVENGIDLGVPDAILFNGLG 200
Query: 203 PYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ 262
PYRYD A+VPDGI Y INVEPGKTYRLRVHNVGI+TSLNFRIQNHNLLLVETEGSYTVQ
Sbjct: 201 PYRYDQALVPDGIGYHTINVEPGKTYRLRVHNVGIATSLNFRIQNHNLLLVETEGSYTVQ 260
Query: 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPA 322
QNYTNMDIHVGQS+SFLVT DQNASSDYY+VASPRFVNSS W K TGVAILHYSNS GPA
Sbjct: 261 QNYTNMDIHVGQSYSFLVTMDQNASSDYYMVASPRFVNSSAWAKATGVAILHYSNSQGPA 320
Query: 323 SGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL 382
SGPLPDPPN DT+FSMNQARSIRWNVSAGAARPNPQGSF+YGQITVTDVYV+LNRPAEL
Sbjct: 321 SGPLPDPPNDLDTFFSMNQARSIRWNVSAGAARPNPQGSFRYGQITVTDVYVLLNRPAEL 380
Query: 383 IEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGF 442
I+GK+RTTLNGISYL PSTPL LAQQFNIPG YK+DFP +LM+R PKVDTS+INGTY+GF
Sbjct: 381 IDGKYRTTLNGISYLAPSTPLKLAQQFNIPGIYKIDFPNRLMNRPPKVDTSIINGTYRGF 440
Query: 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502
MEIIFQNNDTTVQSYH+DGYAFFVVGMD+GVWTENSRGTYNKWDGVAR TTQVFPGAWTA
Sbjct: 441 MEIIFQNNDTTVQSYHLDGYAFFVVGMDYGVWTENSRGTYNKWDGVARCTTQVFPGAWTA 500
Query: 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI-DKSAPLLPDNAIYCGLLSSLQKD 561
ILV LDN GIWNLR ENL+TWYLGQEVYVNV+NPEI DK+ LPDNAIYCG+LSSLQKD
Sbjct: 501 ILVSLDNVGIWNLRTENLNTWYLGQEVYVNVVNPEITDKTELPLPDNAIYCGVLSSLQKD 560
Query: 562 QAQRINFSGAPSVVDASITVLLAFVIALFSYLI 594
++QR+ FSGAP + T+L A + AL + I
Sbjct: 561 RSQRVRFSGAPPLTITRRTILFALITALITAFI 593
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572658|ref|XP_002527262.1| multicopper oxidase, putative [Ricinus communis] gi|223533355|gb|EEF35106.1| multicopper oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/566 (84%), Positives = 518/566 (91%), Gaps = 3/566 (0%)
Query: 11 CVSFFF--ILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTT 68
C+SFFF +L ++ G GDPYVF+DWT+SY+T PLG KQQVIGING FPGPILNVTT
Sbjct: 6 CLSFFFFIVLGCVVTGSLAGDPYVFFDWTVSYLTGYPLGVKQQVIGINGIFPGPILNVTT 65
Query: 69 NWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSF 128
NWNVVVNVKN+LDEPLL+TWNG+QHRKNSWQDGV GTNCPIPAGWNWTYQFQVKDQIGSF
Sbjct: 66 NWNVVVNVKNELDEPLLITWNGIQHRKNSWQDGVSGTNCPIPAGWNWTYQFQVKDQIGSF 125
Query: 129 FYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGV 188
FYFPSL+FQRAAGGYGGIIINNRDVIPLPFAVPDGDI +FISDW+T+SHK+LRK VE G
Sbjct: 126 FYFPSLNFQRAAGGYGGIIINNRDVIPLPFAVPDGDIALFISDWFTESHKELRKHVEKGD 185
Query: 189 DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248
DLGVPDGILING GPYRYD A+V +GI YQ+INVEPGKTYRLRVHNVGISTSLNFRIQNH
Sbjct: 186 DLGVPDGILINGFGPYRYDEALVREGITYQIINVEPGKTYRLRVHNVGISTSLNFRIQNH 245
Query: 249 NLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVT 308
NLLLVETEGSYTVQQNY NMDIHVGQS+SFLVT DQNASSDYYIVASPR+ SS WNK
Sbjct: 246 NLLLVETEGSYTVQQNYENMDIHVGQSYSFLVTMDQNASSDYYIVASPRYT-SSAWNKAA 304
Query: 309 GVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQIT 368
GVAILHYSNS GPASGPLPDPPN YDT+FSMNQARSIRWNVSAGAARPNPQGSFKYG+IT
Sbjct: 305 GVAILHYSNSQGPASGPLPDPPNEYDTFFSMNQARSIRWNVSAGAARPNPQGSFKYGEIT 364
Query: 369 VTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428
VTDVYV+LNR AELI+GKWRT LNGISYL PSTPL LAQQ+NI G YKLDFP ++M+R P
Sbjct: 365 VTDVYVLLNRRAELIDGKWRTALNGISYLAPSTPLKLAQQYNISGVYKLDFPNRIMNRPP 424
Query: 429 KVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV 488
KVD SLINGT+KGFMEIIFQNNDTTVQSYH+DGYAFFVVGMDFGVWTENSRGTYNKWDGV
Sbjct: 425 KVDASLINGTFKGFMEIIFQNNDTTVQSYHVDGYAFFVVGMDFGVWTENSRGTYNKWDGV 484
Query: 489 ARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN 548
ARST QVFPGAWTAILV LDNAG+WN+RA+NL++WYLGQEVYV+V+NPEID S LPDN
Sbjct: 485 ARSTIQVFPGAWTAILVSLDNAGMWNIRAQNLNSWYLGQEVYVSVVNPEIDASEIALPDN 544
Query: 549 AIYCGLLSSLQKDQAQRINFSGAPSV 574
AI+CGLLSSLQKDQAQR FS APS+
Sbjct: 545 AIFCGLLSSLQKDQAQRFRFSNAPSI 570
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132042|ref|XP_002321241.1| predicted protein [Populus trichocarpa] gi|222862014|gb|EEE99556.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/551 (86%), Positives = 510/551 (92%), Gaps = 4/551 (0%)
Query: 10 SCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTN 69
SC ++ ++L L+ G F GDPYVF+DWT+SY+TASPLG KQQVIGIN QFPGPILNVTTN
Sbjct: 8 SC-TYVVLVLCLVTGSFAGDPYVFFDWTVSYLTASPLGIKQQVIGINRQFPGPILNVTTN 66
Query: 70 WNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFF 129
WNVVVNVKNDLDEPLL+TWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFF
Sbjct: 67 WNVVVNVKNDLDEPLLITWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFF 126
Query: 130 YFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD 189
YFPSL+FQR+AGGYGG+IINNRDVIPLPFAVPD D+ +FISDWYTKSHKKLRKDVENG D
Sbjct: 127 YFPSLNFQRSAGGYGGVIINNRDVIPLPFAVPDADVVLFISDWYTKSHKKLRKDVENGED 186
Query: 190 LGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN 249
LGVPDGILING GPYRYD A+V GI YQ+INVEPG TYR RVHNVGISTSLNFRIQNHN
Sbjct: 187 LGVPDGILINGFGPYRYDEALVQGGIAYQIINVEPGSTYRFRVHNVGISTSLNFRIQNHN 246
Query: 250 LLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTG 309
LLLVETEGSYTVQQNYTNMDIHVGQS+SFLVT DQ ASSDYYIVASPR+VNSS K +G
Sbjct: 247 LLLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQTASSDYYIVASPRYVNSS---KASG 303
Query: 310 VAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITV 369
VAILHY+NS GPASGPLPDPPN YD++FSMNQARSIRWNVSAGAARPNPQGSFKYGQITV
Sbjct: 304 VAILHYANSQGPASGPLPDPPNEYDSFFSMNQARSIRWNVSAGAARPNPQGSFKYGQITV 363
Query: 370 TDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429
TDVYVI+NRPAELI+GKW TTLNGISYLPPSTPL LAQQ+NIPG YKLDFP M+R PK
Sbjct: 364 TDVYVIVNRPAELIDGKWCTTLNGISYLPPSTPLKLAQQYNIPGVYKLDFPNAQMNRPPK 423
Query: 430 VDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVA 489
VDTSLINGT+KGFMEIIFQNNDT VQSYHMDGYAFFVVGMDFGVWTENSR TYNKWDGVA
Sbjct: 424 VDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWDGVA 483
Query: 490 RSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNA 549
RSTTQVFPGAWTAILV LDNAGIWNLR+ENLD+WYLGQEVY++++NPEIDKS LPDN
Sbjct: 484 RSTTQVFPGAWTAILVSLDNAGIWNLRSENLDSWYLGQEVYLSIMNPEIDKSEAPLPDNT 543
Query: 550 IYCGLLSSLQK 560
IYCG+LSSLQK
Sbjct: 544 IYCGILSSLQK 554
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449462469|ref|XP_004148963.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/580 (80%), Positives = 516/580 (88%)
Query: 16 FILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVN 75
F+ L L DPYVF+DWT+SY++ASPLG KQ+VIGINGQFPGP+LNVTTNWNVVVN
Sbjct: 16 FLFLCLKRYALASDPYVFFDWTVSYISASPLGLKQKVIGINGQFPGPVLNVTTNWNVVVN 75
Query: 76 VKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135
VKNDLDEPLLLTWNG+QHRKNSWQDGV GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL+
Sbjct: 76 VKNDLDEPLLLTWNGIQHRKNSWQDGVSGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLN 135
Query: 136 FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDG 195
FQRAAGGYGGI INNRDVIPLPF+VPDGDITIFISDWYTK HK+LRKDVENG+ LGVPDG
Sbjct: 136 FQRAAGGYGGITINNRDVIPLPFSVPDGDITIFISDWYTKGHKELRKDVENGIHLGVPDG 195
Query: 196 ILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET 255
ILING GP+R+D+A+V DGIP+ INVEPGKTYRLRVHNVGISTSLNFRIQ+HNLLLVET
Sbjct: 196 ILINGEGPFRFDSALVSDGIPFHTINVEPGKTYRLRVHNVGISTSLNFRIQSHNLLLVET 255
Query: 256 EGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
EGSYTVQQ Y NMDIHVGQS+SFLV DQNASSDYYIVAS R +NSS TGVAILHY
Sbjct: 256 EGSYTVQQAYENMDIHVGQSYSFLVMMDQNASSDYYIVASSRLLNSSSLAGTTGVAILHY 315
Query: 316 SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVI 375
SNS GPASGPLPDPPN DT+FSMNQARSIRWNVSAGAARPNPQGSF YGQITVTDVYVI
Sbjct: 316 SNSQGPASGPLPDPPNELDTFFSMNQARSIRWNVSAGAARPNPQGSFNYGQITVTDVYVI 375
Query: 376 LNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLI 435
LNRP+ELI GKWR TLNG+SY PSTPL AQQF+IPG YKLDFP ++M+R PK+DTSLI
Sbjct: 376 LNRPSELINGKWRRTLNGLSYFTPSTPLKHAQQFSIPGVYKLDFPNQMMNRPPKLDTSLI 435
Query: 436 NGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV 495
NGT+KGFMEIIFQN+D VQ+YH+DGYAFFVVGMDFGVWTENSRGTYNKWDGVAR +TQV
Sbjct: 436 NGTFKGFMEIIFQNSDKNVQTYHLDGYAFFVVGMDFGVWTENSRGTYNKWDGVARCSTQV 495
Query: 496 FPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCGLL 555
FPGAWTA+LV LDNAGIWNLR+ENLD+WYLGQE+YV+V+NPEIDKS +PDN IYCGLL
Sbjct: 496 FPGAWTAVLVSLDNAGIWNLRSENLDSWYLGQELYVSVVNPEIDKSEIPMPDNTIYCGLL 555
Query: 556 SSLQKDQAQRINFSGAPSVVDASITVLLAFVIALFSYLIR 595
SSLQKDQ+QR FSGA S DA +++ ++ L + IR
Sbjct: 556 SSLQKDQSQRFKFSGAASSADAFHSIVAVLIMTLMATFIR 595
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524453|ref|XP_003530843.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/570 (82%), Positives = 509/570 (89%), Gaps = 4/570 (0%)
Query: 13 SFFF---ILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTN 69
S+FF +L + L+ F GDPYVFYDWT+SY +ASPLG KQ+VIGINGQFPGP LNVTTN
Sbjct: 7 SWFFTTLLLCFFLHVTFAGDPYVFYDWTVSYTSASPLGVKQKVIGINGQFPGPTLNVTTN 66
Query: 70 WNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFF 129
WNVVVNVKN+LDEPLLLTWNG+QHRKNSWQDGV GTNCPIPAGWNWTY+FQVKDQIGSFF
Sbjct: 67 WNVVVNVKNNLDEPLLLTWNGIQHRKNSWQDGVSGTNCPIPAGWNWTYEFQVKDQIGSFF 126
Query: 130 YFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD 189
YFPSL+FQRAAGGYGGIIINNR VIP+PF +PDGDITIF+SDWYT+SHK+LRKDVE+G+D
Sbjct: 127 YFPSLNFQRAAGGYGGIIINNRPVIPVPFGLPDGDITIFLSDWYTRSHKELRKDVEDGID 186
Query: 190 LGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN 249
LGVPDG+LINGLGPYRYD +VP+GI Y++INVEPGKTYRLRVHNVGIS SLNFRIQNHN
Sbjct: 187 LGVPDGVLINGLGPYRYDENLVPNGISYRIINVEPGKTYRLRVHNVGISASLNFRIQNHN 246
Query: 250 LLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTG 309
LLLVETEGSYTVQQNYTNMDIHVGQS+SFLVT DQNAS+DYYIVASPRFVNSS W TG
Sbjct: 247 LLLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQNASTDYYIVASPRFVNSS-WAGATG 305
Query: 310 VAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITV 369
VAILHYSNS GPASGPLP D FS+NQARSIRWNVSAGAARPNPQGSFKYG ITV
Sbjct: 306 VAILHYSNSQGPASGPLPSLLGEDDPSFSINQARSIRWNVSAGAARPNPQGSFKYGDITV 365
Query: 370 TDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429
TDVYVILNRP ELI GKWRTTLNGISYLPP TPL L QQFNI G YK+DFP +LM+R PK
Sbjct: 366 TDVYVILNRPPELINGKWRTTLNGISYLPPPTPLKLVQQFNILGVYKIDFPNRLMNRPPK 425
Query: 430 VDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVA 489
VDTSLINGTY+GFMEIIFQNNDTTVQSYH+DGYAFFVVGMDFGVWTENSR TYNKWDGVA
Sbjct: 426 VDTSLINGTYRGFMEIIFQNNDTTVQSYHLDGYAFFVVGMDFGVWTENSRSTYNKWDGVA 485
Query: 490 RSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNA 549
R TTQVFPGAWTAILV LDNAGIWNLRAENL++WYLGQEVYV+V+NPE D + LPDNA
Sbjct: 486 RCTTQVFPGAWTAILVSLDNAGIWNLRAENLNSWYLGQEVYVHVVNPEKDNNENTLPDNA 545
Query: 550 IYCGLLSSLQKDQAQRINFSGAPSVVDASI 579
I+CGLLSSLQKDQ+ + FS SI
Sbjct: 546 IFCGLLSSLQKDQSHKFQFSVGSPFCSTSI 575
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188257|ref|NP_199656.2| protein SKU5 similar 3 [Arabidopsis thaliana] gi|332008289|gb|AED95672.1| protein SKU5 similar 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/590 (73%), Positives = 503/590 (85%), Gaps = 21/590 (3%)
Query: 8 CSSCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVT 67
C+S V F + G DPYVF+DWT+SY++ASPLG +QQVIGINGQFPGPILNVT
Sbjct: 10 CTSLVVFLSV-----TGALAADPYVFFDWTVSYLSASPLGTRQQVIGINGQFPGPILNVT 64
Query: 68 TNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGS 127
TNWNVV+NVKN+LDEPLLLTWNG+QHRKNSWQDGVLGTNCPIP+GWNWTY+FQVKDQIGS
Sbjct: 65 TNWNVVMNVKNNLDEPLLLTWNGIQHRKNSWQDGVLGTNCPIPSGWNWTYEFQVKDQIGS 124
Query: 128 FFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187
FFYFPS +FQRA+GGYGGII+NNR +IP+PFA+PDGD+T+FISDWYTKSHKKLRKDVE+
Sbjct: 125 FFYFPSTNFQRASGGYGGIIVNNRAIIPVPFALPDGDVTLFISDWYTKSHKKLRKDVESK 184
Query: 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN 247
L PDGI+ING GP+ +G P+ INVEPG+TYR RVHN GI+TSLNFRIQN
Sbjct: 185 NGLRPPDGIVINGFGPF------ASNGSPFGTINVEPGRTYRFRVHNSGIATSLNFRIQN 238
Query: 248 HNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKV 307
HNLLLVETEGSYT+QQNYTNMDIHVGQSFSFLVT DQ+ S+DYYIVASPRF S K
Sbjct: 239 HNLLLVETEGSYTIQQNYTNMDIHVGQSFSFLVTMDQSGSNDYYIVASPRFATSI---KA 295
Query: 308 TGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQI 367
+GVA+L YSNS GPASGPLPDPP DT+FSMNQARS+R N+S+GAARPNPQGSFKYGQI
Sbjct: 296 SGVAVLRYSNSQGPASGPLPDPPIELDTFFSMNQARSLRLNLSSGAARPNPQGSFKYGQI 355
Query: 368 TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427
TVTDVYVI+NRP E+IEG+ R TLNGISYLPP+TPL LAQQ+NI G YKLDFP + M+R
Sbjct: 356 TVTDVYVIVNRPPEMIEGRLRATLNGISYLPPATPLKLAQQYNISGVYKLDFPKRPMNRH 415
Query: 428 PKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDG 487
P+VDTS+INGT+KGF+EIIFQN+DTTV+SYH+DGYAFFVVGMDFG+WTENSR TYNK D
Sbjct: 416 PRVDTSVINGTFKGFVEIIFQNSDTTVKSYHLDGYAFFVVGMDFGLWTENSRSTYNKGDA 475
Query: 488 VARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE--IDKSAPLL 545
VARSTTQVFPGAWTA+LV LDNAG+WNLR +NL +WYLGQE+Y++V+NPE ID S +
Sbjct: 476 VARSTTQVFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSV 535
Query: 546 PDNAIYCGLLSSLQKDQAQRINFSGAP-SVVDASITVLLAFVIALFSYLI 594
P N+IYCG LS LQKDQAQR+NFSG+ S+ S +LL ALF+ L+
Sbjct: 536 PKNSIYCGRLSPLQKDQAQRVNFSGSQRSIFVTSRGILL----ALFAILV 581
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357504891|ref|XP_003622734.1| Monocopper oxidase-like protein SKU5 [Medicago truncatula] gi|355497749|gb|AES78952.1| Monocopper oxidase-like protein SKU5 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/602 (75%), Positives = 503/602 (83%), Gaps = 34/602 (5%)
Query: 25 CFGGDPYVFYDWTISYVTASPLGDKQQ--------------------------------V 52
F GDP+V++DW++SY TASPLG KQQ V
Sbjct: 22 AFSGDPFVYFDWSVSYTTASPLGVKQQNLLDRVTLRIYNTKYPVPVWAYMQEPVPEALLV 81
Query: 53 IGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAG 112
IGIN QFPGPILNVTTNWNVVVNVKNDLDEPLLL WNGVQHRK++WQDGV GTNCPIPAG
Sbjct: 82 IGINKQFPGPILNVTTNWNVVVNVKNDLDEPLLLHWNGVQHRKDTWQDGVSGTNCPIPAG 141
Query: 113 WNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDW 172
WNWTY+FQVKDQIGSFFYFPSL+FQRA+GGYGGIIINNR VIP+PF +PDGD+TIF+SDW
Sbjct: 142 WNWTYEFQVKDQIGSFFYFPSLNFQRASGGYGGIIINNRAVIPVPFGLPDGDVTIFLSDW 201
Query: 173 YTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRV 232
YTKSHK LRKDVENGVDLG+PDG+LING GPYRYD +VP+GI YQ+INVEPGKTYR+RV
Sbjct: 202 YTKSHKDLRKDVENGVDLGIPDGVLINGFGPYRYDDTLVPNGISYQIINVEPGKTYRIRV 261
Query: 233 HNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYI 292
HNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQS+SFLVT DQNAS+DYYI
Sbjct: 262 HNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQNASTDYYI 321
Query: 293 VASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352
VASPRFVNSS W + TGVAILHY+NS GPASGPLP + + FS+NQARSIRWNVSAG
Sbjct: 322 VASPRFVNSS-WTRATGVAILHYANSQGPASGPLPSLSDQDNPSFSINQARSIRWNVSAG 380
Query: 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIP 412
AARPNPQGSFKYG ITVTDVYVI+NRP ELI GKWRTTLNGISYLPPSTPL LAQ + I
Sbjct: 381 AARPNPQGSFKYGDITVTDVYVIVNRPPELINGKWRTTLNGISYLPPSTPLTLAQHYKIL 440
Query: 413 GAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFG 472
G YKLDFP + M+R KVD SLINGTY+GFMEIIFQNNDTTVQSYH+DGYAFFVVGMDFG
Sbjct: 441 GVYKLDFPNRWMNRPSKVDVSLINGTYRGFMEIIFQNNDTTVQSYHLDGYAFFVVGMDFG 500
Query: 473 VWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVN 532
WTENSR TYNKWDGVAR TTQVFPGAWTAILV LDNAGIWNLRAENL++WYLGQE Y+
Sbjct: 501 AWTENSRSTYNKWDGVARCTTQVFPGAWTAILVSLDNAGIWNLRAENLNSWYLGQESYLQ 560
Query: 533 VINPEIDKSAPLLPDNAIYCGLLSSLQKDQAQRINFS-GAPSVVDASITVLLAFVIALFS 591
V+N E D + LPDNAIYCGLLSSLQ+DQ+ + FS G+P ++ + + + +AL
Sbjct: 561 VVNTENDSNENSLPDNAIYCGLLSSLQRDQSHKYQFSVGSPRSSNSRMILFMLLFLALIE 620
Query: 592 YL 593
L
Sbjct: 621 SL 622
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297795505|ref|XP_002865637.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311472|gb|EFH41896.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/557 (76%), Positives = 483/557 (86%), Gaps = 10/557 (1%)
Query: 6 YLCSSCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILN 65
+ C+S V F + G DPYVF+DWT+SY++ASP G +QQVIGINGQFPGPILN
Sbjct: 8 FWCTSVVLFLSV-----TGTLAADPYVFFDWTVSYLSASPFGTRQQVIGINGQFPGPILN 62
Query: 66 VTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI 125
VTTNWNVV+NVKNDLDEPLLLTWNG+QHRKNSWQDGVLGTNCPIP+GWNWTY+FQVKDQI
Sbjct: 63 VTTNWNVVMNVKNDLDEPLLLTWNGIQHRKNSWQDGVLGTNCPIPSGWNWTYEFQVKDQI 122
Query: 126 GSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185
GSFFYFPS +FQRA+GGYGGIIINNR++IP+PFA+PDGD+T+FISDWYTKSHKKLRKDVE
Sbjct: 123 GSFFYFPSTNFQRASGGYGGIIINNREIIPVPFALPDGDVTLFISDWYTKSHKKLRKDVE 182
Query: 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI 245
+ LG PDGI+ING GP+ Y + + P+ INVEPG+TYR RVHN GI+TSLNFRI
Sbjct: 183 SKKGLGPPDGIVINGFGPFPYTRELASNNFPFGTINVEPGRTYRFRVHNSGIATSLNFRI 242
Query: 246 QNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305
QNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVT DQ+ S+DYYIVASPRF S
Sbjct: 243 QNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTMDQSGSNDYYIVASPRFATSV--- 299
Query: 306 KVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYG 365
K +GVA+LHYSNS GPASGPLPDPP DT+FSMNQARS+R N+SAGAARPNPQGSFKYG
Sbjct: 300 KASGVAVLHYSNSQGPASGPLPDPPIELDTFFSMNQARSLRLNLSAGAARPNPQGSFKYG 359
Query: 366 QITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMS 425
QITVTDVYVI+NR E+IEG+ R TLNGISYLPPSTPL LAQQ+NI G YKLDFP + M+
Sbjct: 360 QITVTDVYVIVNRSPEMIEGRLRATLNGISYLPPSTPLKLAQQYNISGVYKLDFPKRPMN 419
Query: 426 RAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKW 485
R P+VDTS+INGT+KGF+EIIFQN+DTTV+SYH+DGYAFFVVGMDFG+WTENSR TYNK
Sbjct: 420 RHPRVDTSVINGTFKGFVEIIFQNSDTTVKSYHLDGYAFFVVGMDFGLWTENSRSTYNKG 479
Query: 486 DGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI--DKSAP 543
D VARSTTQVFPGAWTAILV LDNAG+WNLR +NL +WYLGQE+Y++V+NPEI D S
Sbjct: 480 DAVARSTTQVFPGAWTAILVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDSDSSEN 539
Query: 544 LLPDNAIYCGLLSSLQK 560
+PDN IYCG LS LQK
Sbjct: 540 SVPDNTIYCGRLSPLQK 556
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224285319|gb|ACN40384.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/572 (72%), Positives = 474/572 (82%), Gaps = 3/572 (0%)
Query: 25 CFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPL 84
+ GDP+VFYDW +SY+ A+PLG KQQVI INGQFPGP++N+TTNWN VNV N+LDEPL
Sbjct: 20 AYCGDPFVFYDWNVSYIEAAPLGVKQQVIAINGQFPGPLVNLTTNWNAAVNVMNNLDEPL 79
Query: 85 LLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYG 144
L+TWNG+Q+R+NSWQDGV GTNCPIP GWNWTY FQ KDQIGSFFYFPSL FQRAAGG+G
Sbjct: 80 LITWNGLQNRRNSWQDGVSGTNCPIPVGWNWTYNFQAKDQIGSFFYFPSLHFQRAAGGFG 139
Query: 145 GIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPY 204
G+I+NNR VIP+PF PDGD+TIFI DWYT+SHK LR ++ G DLG+PDG+L NG GPY
Sbjct: 140 GVIVNNRAVIPVPFGTPDGDLTIFIGDWYTRSHKDLRAALDAGKDLGMPDGVLFNGKGPY 199
Query: 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264
RY+ + VP GI Y+ NV+PGKTYR+RVHNVGISTSLNFRIQNHN+LLVETEGSY QQN
Sbjct: 200 RYNNS-VPSGIEYETFNVQPGKTYRIRVHNVGISTSLNFRIQNHNILLVETEGSYASQQN 258
Query: 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASG 324
YTN+DIHVGQS+SFLVT DQNASSDYY+VAS RFVN++ W+ VTGVAILHYSNS G A G
Sbjct: 259 YTNLDIHVGQSYSFLVTMDQNASSDYYMVASARFVNTTIWSNVTGVAILHYSNSKGKAKG 318
Query: 325 PLPD-PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
PLPD P + YD YFSMNQARSIRWNVSAGAARPNPQGSFKYGQI VT V+V+ N+P ELI
Sbjct: 319 PLPDGPDDYYDKYFSMNQARSIRWNVSAGAARPNPQGSFKYGQINVTQVFVLKNKPPELI 378
Query: 384 EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443
GK R TLNGISY P+TPL LA ++N+ G +KLDFP M+R PK+DTS+INGTY+GFM
Sbjct: 379 NGKRRCTLNGISYQAPATPLKLADRYNLTGVFKLDFPNAPMNRPPKLDTSIINGTYRGFM 438
Query: 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503
EII QNNDTTVQSYHMDGYAFFVVGMD+G WTENSRGTYNKWDGVARST QVFP AWTAI
Sbjct: 439 EIILQNNDTTVQSYHMDGYAFFVVGMDYGDWTENSRGTYNKWDGVARSTAQVFPNAWTAI 498
Query: 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPL-LPDNAIYCGLLSSLQKDQ 562
LV LDN G+WNLRAENLD WYLGQE YV V+NPEI+ L LP NA+YCG LS +QK Q
Sbjct: 499 LVSLDNVGMWNLRAENLDAWYLGQETYVRVVNPEINNKTELPLPSNALYCGALSRMQKPQ 558
Query: 563 AQRINFSGAPSVVDASITVLLAFVIALFSYLI 594
+ N + S ++A I LL + + L
Sbjct: 559 SHSNNEKASGSSINAGIVTLLGGFLIFWGILF 590
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414866853|tpg|DAA45410.1| TPA: hypothetical protein ZEAMMB73_672798 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/566 (74%), Positives = 484/566 (85%), Gaps = 3/566 (0%)
Query: 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLL 86
GDPY +YDW +SY++A PLG KQ+VIGINGQFPGP LNVTTNWNVVVNV+N LDEPLLL
Sbjct: 124 AGDPYSYYDWEVSYISAQPLGVKQKVIGINGQFPGPPLNVTTNWNVVVNVRNALDEPLLL 183
Query: 87 TWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGI 146
TWNGVQ RK +WQDGVLGTNC IPAGWNWTY FQVKDQ+GSFFYFPS RAAGGYG I
Sbjct: 184 TWNGVQQRKTAWQDGVLGTNCAIPAGWNWTYTFQVKDQVGSFFYFPSTPLHRAAGGYGAI 243
Query: 147 IINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
INNRDVIP+PFA PDGDIT+FI DWY + H++LR ++ G LG PDG+LINGLGPY+Y
Sbjct: 244 TINNRDVIPIPFAFPDGDITLFIGDWYNRGHRELRSALDGGTLLGAPDGVLINGLGPYQY 303
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
+ ++VP GI Y+ INVEPGKTYR RVHNVG+STSLNFRIQNHNLLLVETEGSYT QQNYT
Sbjct: 304 NESVVPPGIVYERINVEPGKTYRFRVHNVGVSTSLNFRIQNHNLLLVETEGSYTSQQNYT 363
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
N+DIHVGQS+SFLVT DQNAS+DYY+VAS RFV+++ +K+TGVAILHYSNS GPASGPL
Sbjct: 364 NLDIHVGQSYSFLVTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPL 423
Query: 327 PDPPN-AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
PDPPN YDT FS+NQARSIRWNV+A ARPNPQGSF YG ITVTDV+++ +R ELI+G
Sbjct: 424 PDPPNDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVFLLQSRAPELIDG 483
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445
K R+TLN ISY+ PSTPL+LAQ FN+PG +KLDFP M+R PKVDTS+INGTYKGFMEI
Sbjct: 484 KLRSTLNEISYIAPSTPLVLAQIFNVPGVFKLDFPNHPMNRLPKVDTSIINGTYKGFMEI 543
Query: 446 IFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILV 505
IFQNN T VQSYH+DGYAFFVVGMD+G+WTENSRGTYNKWDGVARST QVFPGAWTAILV
Sbjct: 544 IFQNNATNVQSYHLDGYAFFVVGMDYGLWTENSRGTYNKWDGVARSTIQVFPGAWTAILV 603
Query: 506 YLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCGLLSSLQKDQAQR 565
+LDNAGIWNLR +NLDTWYLGQEVY+NV+NPE S+ LPDNAI+CG LSSLQK+Q+ R
Sbjct: 604 FLDNAGIWNLRVQNLDTWYLGQEVYINVVNPE--DSSTTLPDNAIFCGALSSLQKEQSHR 661
Query: 566 INFSGAPSVVDASITVLLAFVIALFS 591
+S A V T+ L ++A F+
Sbjct: 662 FQYSKAAPVPQWGETISLLVLLACFA 687
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| TAIR|locus:2135535 | 587 | SKU5 [Arabidopsis thaliana (ta | 0.959 | 0.972 | 0.633 | 1.3e-201 | |
| TAIR|locus:2122689 | 589 | SKS1 "SKU5 similar 1" [Arabido | 0.966 | 0.976 | 0.584 | 2.7e-194 | |
| TAIR|locus:2153107 | 592 | SKS2 "SKU5 similar 2" [Arabido | 0.971 | 0.976 | 0.568 | 2.5e-191 | |
| TAIR|locus:2092845 | 554 | sks11 "SKU5 similar 11" [Arabi | 0.868 | 0.933 | 0.460 | 1.5e-129 | |
| TAIR|locus:2193894 | 555 | sks12 "SKU5 similar 12" [Arabi | 0.868 | 0.931 | 0.455 | 4e-129 | |
| TAIR|locus:2092865 | 551 | sks13 "SKU5 similar 13" [Arabi | 0.865 | 0.934 | 0.458 | 7.8e-126 | |
| TAIR|locus:2193899 | 549 | sks14 "SKU5 similar 14" [Arabi | 0.865 | 0.938 | 0.454 | 2.6e-125 | |
| TAIR|locus:2121823 | 549 | sks9 "SKU5 similar 9" [Arabido | 0.855 | 0.927 | 0.472 | 3.1e-122 | |
| TAIR|locus:2005594 | 545 | sks18 "SKU5 similar 18" [Arabi | 0.863 | 0.943 | 0.458 | 1.4e-117 | |
| TAIR|locus:2132927 | 547 | sks10 "SKU5 similar 10" [Arabi | 0.850 | 0.925 | 0.454 | 6.4e-115 |
| TAIR|locus:2135535 SKU5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1951 (691.8 bits), Expect = 1.3e-201, P = 1.3e-201
Identities = 366/578 (63%), Positives = 439/578 (75%)
Query: 17 ILLWLLN--GCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXX 74
+L++ +N CF DPY FY++ +SY+TASPLG QQVI ING+FPGP +
Sbjct: 8 LLVFFVNISFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVV 67
Query: 75 XXXXDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134
LDE LLL WNG+Q R+ SWQDGVLGTNCPIP WNWTY+FQVKDQIGSFFYFPSL
Sbjct: 68 NVRNKLDEGLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSL 127
Query: 135 DFQRAAXXXXXXXXNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPD 194
FQRA+ N R +IP+PF+ PDGDIT+ I DWY ++H LRK +++G DLG+PD
Sbjct: 128 HFQRASGGFGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPD 187
Query: 195 GILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVE 254
G+LING GPYRY+ +V DGI ++ I V PGKTYRLRV NVGISTSLNFRIQ HNL+L E
Sbjct: 188 GVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAE 247
Query: 255 TEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILH 314
+EGSYTVQQNYT++DIHVGQS+SFLVT DQNASSDYYIVAS R VN + W +VTGV IL
Sbjct: 248 SEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILK 307
Query: 315 YSNSLGPASGPLPD-PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVY 373
Y+NS G A G LP P + +D FSMNQARSIRWNVSA ARPNPQGSFKYG I VTDVY
Sbjct: 308 YTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVY 367
Query: 374 VILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTS 433
V+ N P I GK RTTLNGIS+ PSTP+ LA + + YKLDFP + ++ KV TS
Sbjct: 368 VLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATS 427
Query: 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTT 493
+INGTY+GFME++ QNNDT +QSYHM GYAFFVVGMD+G WTENSRGTYNKWDG+ARST
Sbjct: 428 IINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTI 487
Query: 494 QVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINP-EIDKSAPLLPDNAIYC 552
QV+PGAW+AIL+ LDN G WNLR ENLD+WYLGQE YV V+NP E +K+ PDN +YC
Sbjct: 488 QVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYC 547
Query: 553 GLLSSLQKDQAQRINFSGAPSVVDASIT-VLLAFVIAL 589
G LS LQK Q +++ S + S+ S++ V++A V+ +
Sbjct: 548 GALSKLQKPQ--KVSSSASKSIGFTSLSMVVMALVMMM 583
|
|
| TAIR|locus:2122689 SKS1 "SKU5 similar 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 340/582 (58%), Positives = 435/582 (74%)
Query: 8 CSSCVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXX 67
CS SF L F DP+V YD+ +SY+TASPLG QQVI +NGQFPGP+L
Sbjct: 5 CSLLASFLLCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNAT 64
Query: 68 XXXXXXXXXXXDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGS 127
LDEPLLLTW G+Q R+NSWQDGVLGTNCPIP WN+TYQFQVKDQIGS
Sbjct: 65 TNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGS 124
Query: 128 FFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187
FFY PSL+FQRA+ NNRD+IP+PF PDG++ I DWYT+ HK LR+ +++G
Sbjct: 125 FFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSG 184
Query: 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN 247
+LG+PDG+LING GPY+Y+++ VPDGI Y +VEPGKTYR+RVHNVGISTSLNFRIQN
Sbjct: 185 KELGMPDGVLINGKGPYKYNSS-VPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQN 243
Query: 248 HNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKV 307
H+LLLVETEG YT Q N+T+ D+HVGQS+SFLVT DQ+A+SDYYIVAS RFVN + W +V
Sbjct: 244 HSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRV 303
Query: 308 TGVAILHYSNSLGPASGPLPDPPNAYDTYFS-MNQARSIRWNVSAGAARPNPQGSFKYGQ 366
TGVAILHYSNS GP SGPLP P + +S M+Q ++IR N SA ARPNPQGSF YGQ
Sbjct: 304 TGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQ 363
Query: 367 ITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR 426
I +T+ Y++ + P +I G R TLNGIS++ PSTP+ LA + + GAYKLDFP + +R
Sbjct: 364 INITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPFNR 423
Query: 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWD 486
++D S+IN TYKGF++++FQNNDT +QS+H+DGY+FFVVGMDFG+W+E+ +G+YN WD
Sbjct: 424 PLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWD 483
Query: 487 GVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPL-L 545
++RST +V+PG WTA+L+ LDN G+WN+R ENLD WYLG+E Y+ + NPE D +
Sbjct: 484 AISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDP 543
Query: 546 PDNAIYCGLLSSLQKDQAQRINFSGAPSVVDASITVLLAFVI 587
PDN +YCG L +LQK+Q + S A S+++ + ++L V+
Sbjct: 544 PDNVLYCGALKNLQKEQ----HHSAATSILNGHLKLMLLMVL 581
|
|
| TAIR|locus:2153107 SKS2 "SKU5 similar 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1854 (657.7 bits), Expect = 2.5e-191, P = 2.5e-191
Identities = 335/589 (56%), Positives = 436/589 (74%)
Query: 10 SCVSFFFILLW---LLNG-CFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILX 65
+ FFF ++ L+ G F GDPYV YD+T+SY+TASPLG QQVI +NG+FPGP++
Sbjct: 2 AATDFFFAFVFSFALIFGFSFAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVIN 61
Query: 66 XXXXXXXXXXXXXDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI 125
LDEPLLLTW GVQ R+NSWQDGVLGTNCPIP WN+TY FQ+KDQI
Sbjct: 62 ATTNYNVHVNVLNHLDEPLLLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQI 121
Query: 126 GSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185
GS+FY PSL+FQRA+ NNRD++P+PF PDG+I I DWYT++H LR+ ++
Sbjct: 122 GSYFYSPSLNFQRASGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILD 181
Query: 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI 245
+G +LG+PDG+LING GP++Y+++ VPDGI ++ +NV+PGKTYR+RVHNVGISTSLNFRI
Sbjct: 182 SGKELGMPDGVLINGKGPFKYNSS-VPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRI 240
Query: 246 QNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305
QNH LLL+ETEG YT Q N+T+ D+HVGQS+SFLVT DQNA+SDYYIVAS RFVN + W
Sbjct: 241 QNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQ 300
Query: 306 KVTGVAILHYSNSLGPASGPLP-DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKY 364
+VTGV ILHYSNS GPASGPLP + + +MNQ R+I+ N SA ARPNPQGSF Y
Sbjct: 301 RVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHY 360
Query: 365 GQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYK-L 423
GQI +T Y++ + P I GK R TLNGIS++ PSTP+ LA + G Y LDFP + L
Sbjct: 361 GQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYMLDFPDRPL 420
Query: 424 MSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYN 483
+ P++ +S+IN TYKGF+++IFQNNDT +QS+H+DGYAF+VV MDFG+W+E+ +YN
Sbjct: 421 DEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYN 480
Query: 484 KWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAP 543
WD VARST +V+PGAWTA+L+ LDN G+WN+R ENLD WYLGQE Y+ +INPE + S
Sbjct: 481 NWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTE 540
Query: 544 L-LPDNAIYCGLLSSLQKDQAQRINFSGAPSVVDASITVLLAFVIALFS 591
+ P+N +YCG L ++QK+Q S S+ + + ++ + ++ L S
Sbjct: 541 MDPPENVMYCGALQAMQKEQHHS---SATKSMTNGQLILIFSMMMVLLS 586
|
|
| TAIR|locus:2092845 sks11 "SKU5 similar 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 248/538 (46%), Positives = 346/538 (64%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLTW 88
DPY + W ++Y T SPLG QQVI INGQFPGP + +LDEP LLTW
Sbjct: 25 DPYFHHVWNVTYGTVSPLGVPQQVILINGQFPGPNVNSTSNNNVIINVFNNLDEPFLLTW 84
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXX 148
NG+QHRKN WQDG GT CPI G N+TY FQ KDQIGS+FY+PS R+A
Sbjct: 85 NGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPSTAMHRSAGGFGGLRV 144
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
N+R +IP+P+A P+ D T+ I DWYTKSH +L+K +++G LG PDGILING + D
Sbjct: 145 NSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDSGRTLGRPDGILINGKSG-KGDG 203
Query: 209 AIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268
+ P L ++PGKTYR+R+ NVG+ TSLNFRIQNH L LVE EGS+ +Q +Y ++
Sbjct: 204 SDAP------LFTLKPGKTYRVRICNVGLKTSLNFRIQNHKLKLVEMEGSHVLQNDYDSL 257
Query: 269 DIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPD 328
D+HVGQ + ++T +Q A DYY+VAS RF+ S +T +L Y GPAS LP
Sbjct: 258 DVHVGQCYGTILTANQEAK-DYYMVASSRFLKSV----ITTTGLLRYEGGKGPASSQLPP 312
Query: 329 PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWR 388
P + +S+NQ RS RWN++A AARPNPQGS+ YG+I +T ++N + ++GK R
Sbjct: 313 GPVGWA--WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKLR 369
Query: 389 TTLNGISYLPPSTPLMLAQQFNIPG-AYKLDF----PYKLMSRAPKVDTSLINGTYKGFM 443
LNG+S+ P TPL LA+ F + +K D P ++ K+ +++N T++ F+
Sbjct: 370 YALNGVSHTDPETPLKLAEYFGVADKVFKYDSITDNPTPEQIKSIKIVPNVLNITHRTFI 429
Query: 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503
E++F+N++ +VQS+H+DGY+FF V ++ G WT R YN D V+R T QV+P W AI
Sbjct: 430 EVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAI 489
Query: 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSLQK 560
L+ DN G+WN+R+EN + YLGQ++Y +V++PE + +P+ ++ CGL+ K
Sbjct: 490 LLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGTPK 547
|
|
| TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 245/538 (45%), Positives = 343/538 (63%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLTW 88
DPY + W ++Y TASPLG QQVI INGQFPGP + +LDEP L+TW
Sbjct: 26 DPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIVNVFNNLDEPFLITW 85
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXX 148
G+QHRKN WQDG GT CPIP G N+TY FQ KDQIGS+FY+P+ RAA
Sbjct: 86 AGIQHRKNCWQDGTAGTMCPIPPGQNFTYHFQPKDQIGSYFYYPTTAMHRAAGGFGGLRV 145
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
N+R +IP+P+A P+ D TI I+DWYTKSH +L+K +++G +G PDGILING
Sbjct: 146 NSRLLIPVPYADPEDDYTILINDWYTKSHTQLKKFLDSGRTIGRPDGILINGKSGKT--- 202
Query: 209 AIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268
DG L ++PGKTYR+R+ NVG+ SLNFRIQNH + LVE EGS+ +Q +Y ++
Sbjct: 203 ----DGSDKPLFTLKPGKTYRVRICNVGLKASLNFRIQNHKMKLVEMEGSHVLQNDYDSL 258
Query: 269 DIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPD 328
D+HVGQ F +VT DQ DYY++AS RF+ +T +L Y GPAS LP
Sbjct: 259 DVHVGQCFGVIVTADQEPK-DYYMIASTRFLKKP----LTTTGLLRYEGGKGPASSQLPA 313
Query: 329 PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWR 388
P + +S+NQ RS RWN++A AARPNPQGS+ YG+I +T ++N + ++GK R
Sbjct: 314 APVGWA--WSLNQYRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKLR 370
Query: 389 TTLNGISYLPPSTPLMLAQQFNIPG-AYKLDF----PYKLMSRAPKVDTSLINGTYKGFM 443
L+G+S+ P TPL LA+ F + +K D P + K++ +++N T++ F+
Sbjct: 371 YALSGVSHTDPETPLKLAEYFGVADKVFKYDTISDNPNPDQIKNIKIEPNVLNITHRTFI 430
Query: 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503
E++F+N++ +VQS+H+DGY+FF V ++ G WT R YN D V+R T QV+P W AI
Sbjct: 431 EVVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAI 490
Query: 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSLQK 560
L+ DN G+WN+R+EN + YLGQ++Y +V++PE + +P+ ++ CGL+ K
Sbjct: 491 LLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGKPK 548
|
|
| TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 246/537 (45%), Positives = 346/537 (64%)
Query: 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT 87
GDPY +Y W ++Y TA+PLG QQVI INGQFPGP L +LDEP LLT
Sbjct: 23 GDPYFYYTWNVTYGTAAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLLT 82
Query: 88 WNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXX 147
W+G+QHRKNSWQDGV GT+CPIPAG N+TY FQ KDQIGS+FY+PS R A
Sbjct: 83 WSGLQHRKNSWQDGVTGTSCPIPAGTNFTYHFQPKDQIGSYFYYPSTALHRFAGGFGGLR 142
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
N+R +IP+P+A P+ D TI I+DWY KSH L+ +++G LG PDG+LING
Sbjct: 143 VNSRLLIPVPYADPEDDRTILINDWYAKSHTALKNFLDSGRTLGSPDGVLINGKS----- 197
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ + P L ++PGKTY+ R+ NVG ++LNFRIQ H + LVE EGS+ +Q +Y +
Sbjct: 198 GKLGGNNAP--LFTMKPGKTYKYRICNVGFKSTLNFRIQGHKMKLVEMEGSHVLQNDYDS 255
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+D+HVGQ F+ LVT DQ A + YY+VAS RF+ +V+ V ++ Y S AS +P
Sbjct: 256 LDVHVGQCFAVLVTADQVAKN-YYMVASTRFLKK----EVSTVGVMSYEGSNVQASSDIP 310
Query: 328 DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKW 387
P + +S+NQ RS RWN++A AARPNPQGS+ YG+I +T + N L+ GK
Sbjct: 311 KAPVGWA--WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLANTK-NLVNGKV 367
Query: 388 RTTLNGISYLPPSTPLMLAQQFNIPGA---YKL--DFPYKLMSRAPKVDTSLINGTYKGF 442
R NG+S++ TPL LA+ F + Y + D P ++ V+ +++N T++ F
Sbjct: 368 RFGFNGVSHVDTETPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLT-VEPNVLNITFRTF 426
Query: 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502
+E++F+N++ ++QS+H+DGY+FF V + G WT R YN D V+R T QV+P +W+A
Sbjct: 427 VEVVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSA 486
Query: 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSL 558
IL+ DNAG+WN+R+EN + YLGQ++YV+V++PE + +P N CG++ L
Sbjct: 487 ILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGL 543
|
|
| TAIR|locus:2193899 sks14 "SKU5 similar 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 244/537 (45%), Positives = 348/537 (64%)
Query: 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT 87
GDPY F+ W ++Y TASPLG Q+VI INGQFPGP L LDEP LLT
Sbjct: 22 GDPYFFHTWNVTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVINVFNHLDEPFLLT 81
Query: 88 WNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXX 147
W+G+QHRKN WQDGV GT+CPIPAG N+TY FQ KDQIGS+FY+P+ R A
Sbjct: 82 WSGIQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLHRFAGGFGGLR 141
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
N+R +IP+P+A P+ D T+ + DWYT H L+ +++G LG+P+G+LING
Sbjct: 142 VNSRLLIPVPYADPEDDYTVLLGDWYTAGHTALKNFLDSGRTLGLPNGVLINGKS----- 196
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ P L ++PGKTY+ R+ NVG ++LNFRIQNH + LVE EGS+ +Q +Y +
Sbjct: 197 GKVGGKNEP--LFTMKPGKTYKYRLCNVGFKSTLNFRIQNHKMKLVEMEGSHVIQNDYDS 254
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+D+HVGQ FS LVT +Q A+ DYY+VAS RF+ +++ V ++ Y S AS LP
Sbjct: 255 LDVHVGQCFSVLVTANQ-AAKDYYMVASTRFLKK----ELSTVGVIRYEGSNVQASTELP 309
Query: 328 DPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKW 387
P + +S+NQ RS RWN+++ AARPNPQGS+ YG+I +T ++N + +++GK
Sbjct: 310 KAPVGWA--WSLNQFRSFRWNLTSNAARPNPQGSYHYGKINITRSIKLVNSKS-VVDGKV 366
Query: 388 RTTLNGISYLPPSTPLMLAQQFNIPGA---YKL--DFPYKLMSRAPKVDTSLINGTYKGF 442
R NG+S++ TPL LA+ F + Y + D P ++ A V +++N T++ F
Sbjct: 367 RFGFNGVSHVDTETPLKLAEYFQMSEKVFKYNVIKDEPAAKIT-ALTVQPNVLNITFRTF 425
Query: 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502
+EIIF+N++ T+QS+H+DGY+FF V + G WT R YN D V+R T QV+P +W+A
Sbjct: 426 VEIIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSA 485
Query: 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSL 558
IL+ DNAG+WN+R+ENL+ YLG+++YV+V++PE + +P N CG++ L
Sbjct: 486 ILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGL 542
|
|
| TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 254/538 (47%), Positives = 332/538 (61%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLTW 88
DPY F+DW ++Y SPLG Q+ I INGQ+PGP + DLDEP LL+W
Sbjct: 27 DPYRFFDWRVTYGNISPLGIPQRGILINGQYPGPDIYSVTNDNLIINVHNDLDEPFLLSW 86
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXX 148
NGVQ RKNS+QDGV GT CPIP G N+TY QVKDQIGSFFYFPSL +AA
Sbjct: 87 NGVQLRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFYFPSLAVHKAAGGFGGFRI 146
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
+R IP+PF P GD T I DW+ HK L+ ++ G L +P G+LING
Sbjct: 147 LSRPRIPVPFPEPAGDFTFLIGDWFKHDHKVLKAILDRGHKLPLPQGVLING-------- 198
Query: 209 AIVPDGIPYQL-INVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
G+ Y I V GKTYR R+ NVG+ +LNFRIQ H + LVE EG++TVQ YT+
Sbjct: 199 ----QGVSYMSSITVHKGKTYRFRISNVGLQHTLNFRIQGHQMKLVEVEGTHTVQSMYTS 254
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGP-- 325
+DIHVGQS+S LVT DQ DY IV S +FV K+ + +HYSNS S
Sbjct: 255 LDIHVGQSYSVLVTMDQ-PDQDYDIVVSTKFVAK----KLLVSSTIHYSNSRHSHSSSAN 309
Query: 326 ---LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL 382
+ P + D +S+ QARSIR N++A RPNPQGS+ YG+I ++ +IL A L
Sbjct: 310 SVHVQQPADELD--WSIKQARSIRTNLTASGPRPNPQGSYHYGRIKISRT-LILESSAAL 366
Query: 383 IEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKL-DFPYK-LMSRAPKVDTSLINGTYK 440
++ K R +NG+S++P TPL LA F I G +K+ P K R +++TS++ ++
Sbjct: 367 VKRKQRYAINGVSFVPGDTPLKLADYFKIKGVFKMGSIPDKPRRGRGMRMETSVMGAHHR 426
Query: 441 GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAW 500
F+EIIFQN + VQSYH+DGY+F+VVG D G W++ SR YN D ++RSTTQV+P +W
Sbjct: 427 DFLEIIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRSTTQVYPESW 486
Query: 501 TAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSS 557
TA+ V LDN G+WNLR+E YLGQ+ Y+ V +P + LLP NA+ CG S+
Sbjct: 487 TAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLCGRASN 544
|
|
| TAIR|locus:2005594 sks18 "SKU5 similar 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 254/554 (45%), Positives = 332/554 (59%)
Query: 17 ILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXX 76
I L +L + P Y W +SY LG +QVI IN FPGPIL
Sbjct: 12 ISLVILELSYAFAPISSYQWVVSYSQRFILGGNKQVIVINDMFPGPILNATANDIIVVNI 71
Query: 77 XXDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF 136
+L EP L+TWNG+Q RKNSWQDGV GTNCPI G NWTY+FQVKDQIGS+FYFP+L
Sbjct: 72 FNNLPEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPTLLL 131
Query: 137 QRAAXXXXXXXXNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGI 196
Q+AA +++P+PF PD + I I DW+ H +R ++ G L PDGI
Sbjct: 132 QKAAGGYGAIRIYPPELVPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPNPDGI 191
Query: 197 LINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256
L NG GP A EPGKTYRLR+ NVG+ T LNFRIQ+H++LLVETE
Sbjct: 192 LFNGRGPEETFFAF------------EPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETE 239
Query: 257 GSYTVQQNYTNMDIHVGQSFSFLVT--TDQ-NASSDYYIVASPRFVNSSEWNKVTGVAIL 313
G+Y ++ Y+++DIHVGQS+S LVT TD YYI A+ RF +S + G+A++
Sbjct: 240 GTYVQKRVYSSLDIHVGQSYSILVTAKTDPVGIYRSYYIFATARFTDSY----LGGIALI 295
Query: 314 HYSNS-LGPAS-GPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTD 371
Y S L P GPL P D S+ QA SIR +++ GAAR NPQGS+ YG+I VT
Sbjct: 296 RYPGSPLDPVGQGPLA--PALQDFGSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTR 353
Query: 372 VYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFN-----IPGAYKLDFPYKLMSR 426
+IL+ L GK R T+NG+S++ P TPL L F IPG FP ++
Sbjct: 354 T-IILHNDVMLSSGKLRYTINGVSFVYPETPLKLVDHFQLNDTIIPGM----FPVYPSNK 408
Query: 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWD 486
P + TS+++ YK F+ I+FQN ++SYH+DGY FFVVG FG W+E+ + YN D
Sbjct: 409 TPTLGTSVVDIHYKDFIHIVFQNPLFGLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVD 468
Query: 487 GVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINP-EIDKSA-PL 544
V+RST QV+P +WTAIL+ +DN G+WN+R++ + WYLGQE+Y+ V E D S P+
Sbjct: 469 AVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPV 528
Query: 545 -----LPDNAIYCG 553
+P N I CG
Sbjct: 529 RDENPIPGNVIRCG 542
|
|
| TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 242/532 (45%), Positives = 330/532 (62%)
Query: 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLTWNGV 91
+FY+W ++Y + ++ I INGQFPGP + DLD+P LL+WNGV
Sbjct: 28 LFYNWRVTYGKIALDTLPRRGILINGQFPGPEIRSLTNDNLVINVQNDLDDPFLLSWNGV 87
Query: 92 QHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNR 151
RKNS+QDGV GTNCPIP G N+TY FQVKDQ+GS+FYFPSL Q+AA +
Sbjct: 88 HMRKNSYQDGVYGTNCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSL 147
Query: 152 DVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGV-PDGILINGLGPYRYDAAI 210
IP+PF P D T ++DWY ++H L+K ++ G L + PDG++ING G +
Sbjct: 148 PRIPVPFPEPAEDFTFLVNDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQG-----VST 202
Query: 211 VPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDI 270
V Y I V+ GKTYR RV NVG+ TSLN I H L L+E EG++TVQ YT++DI
Sbjct: 203 V-----YS-ITVDKGKTYRFRVSNVGLQTSLNLEILGHQLKLIEVEGTHTVQTMYTSLDI 256
Query: 271 HVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPA--SGPLPD 328
HVGQ++SFLVT DQ +Y IV S RF+N+ +V A LHYSNS G + PD
Sbjct: 257 HVGQTYSFLVTMDQ-PPQNYSIVVSTRFINA----EVVIRATLHYSNSKGHKIITARRPD 311
Query: 329 PPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWR 388
P D +S+ QA+SIR N++A R NPQGS+ YG++ ++ +IL A L++ K R
Sbjct: 312 PD---DVEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRT-LILESSAALVKRKQR 367
Query: 389 TTLNGISYLPPSTPLMLAQQFNIPGAYKLD-FPYK-LMSRAPKVDTSLINGTYKGFMEII 446
+NG+S++P TPL LA F I +K+ P K ++DT+++ + F+EII
Sbjct: 368 YAINGVSFVPSDTPLKLADHFKIKDVFKVGTIPDKPRRGGGIRLDTAVMGAHHNAFLEII 427
Query: 447 FQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506
FQN + VQSYH+DGY F+VVG++ G+W+ SR YN D ++RSTTQV+P +WTA+ V
Sbjct: 428 FQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPKSWTAVYVA 487
Query: 507 LDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSS 557
LDN G+WNLR++ YLGQ+ Y+ V +P K LP NA+ CG S+
Sbjct: 488 LDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNALLCGRASN 539
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 595 | |||
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 0.0 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 0.0 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 0.0 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 0.0 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 0.0 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 1e-179 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 3e-75 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 3e-62 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 3e-58 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 8e-56 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 4e-47 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 4e-42 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 5e-30 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 2e-25 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 1e-17 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 6e-15 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 1e-05 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 886 bits (2291), Expect = 0.0
Identities = 409/571 (71%), Positives = 477/571 (83%), Gaps = 7/571 (1%)
Query: 28 GDPYVFYDWTISYVTASPLGD--KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
GDPY +YDW +SYV+A+PLG KQ+ IGINGQFPGP LNVTTNWN+VVNV+N LDEPLL
Sbjct: 24 GDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLL 83
Query: 86 LTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGG 145
LTW+GVQ RK++WQDGV GTNC IPAGWNWTYQFQVKDQ+GSFFY PS RAAGGYG
Sbjct: 84 LTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGA 143
Query: 146 IIINNRDVIPLPFAVPD-GDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPY 204
I INNRDVIP+PF PD GDIT+FI+DWY + H+ LR+ ++ G LG PDG+LIN GPY
Sbjct: 144 ITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDLLGAPDGVLINAFGPY 203
Query: 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264
+Y+ ++VP GI Y+ INV+PGKTYR RVHNVG++TSLNFRIQ HNLLLVE EGSYT QQN
Sbjct: 204 QYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQN 263
Query: 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASG 324
YTN+DIHVGQS+SFL+T DQNAS+DYY+VAS RFV+++ +K+TGVAILHYSNS GPASG
Sbjct: 264 YTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASG 323
Query: 325 PLPDPPN-AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
PLPD P+ YDT FS+NQARSIRWNV+A ARPNPQGSF YG ITVTDVY++ + ELI
Sbjct: 324 PLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELI 383
Query: 384 EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443
+GK R TLN ISY+ PSTPLMLAQ FN+PG +KLDFP M+R PK+DTS+INGTYKGFM
Sbjct: 384 DGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLDFPNHPMNRLPKLDTSIINGTYKGFM 443
Query: 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503
EIIFQNN T VQSYH+DGYAFFVVGMD+G+WT+NSRGTYNKWDGVARST QVFPGAWTAI
Sbjct: 444 EIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAI 503
Query: 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE--IDKSAPLLPDNAIYCGLLSSLQKD 561
LV+LDNAGIWNLR ENLD WYLGQEVY+NV+NPE +K+ +PDNAI+CG LSSLQK+
Sbjct: 504 LVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCGALSSLQKE 563
Query: 562 QAQRINFSGAPSVVDA-SITVLLAFVIALFS 591
Q+ R +S A + TV L F +A F+
Sbjct: 564 QSHRFQYSEASPITPLWGKTVKLLFFLACFA 594
|
Length = 596 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 627 bits (1620), Expect = 0.0
Identities = 270/542 (49%), Positives = 371/542 (68%), Gaps = 26/542 (4%)
Query: 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLL 86
DPY F+ W ++Y TASPLG QQVI INGQFPGP +N T+N N+V+NV N+LDEP LL
Sbjct: 23 AEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLL 82
Query: 87 TWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGI 146
TW+G+Q RKNSWQDGV GTNCPIP G N+TY FQ KDQIGS+FY+PS RAAGG+GG+
Sbjct: 83 TWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGL 142
Query: 147 IINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
+N+R +IP+P+A P+ D T+ I DWYTKSH L+K +++G LG PDG+LING +
Sbjct: 143 RVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSG-KG 201
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
D P L ++PGKTYR R+ NVG+ +SLNFRIQ H + LVE EGS+ +Q +Y
Sbjct: 202 DGKDEP------LFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYD 255
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
++D+HVGQ FS LVT +Q A DYY+VAS RF+ +T I+ Y GPAS L
Sbjct: 256 SLDVHVGQCFSVLVTANQ-APKDYYMVASTRFLKKV----LTTTGIIRYEGGKGPASPEL 310
Query: 327 PDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK 386
P+ P + +S+NQ RS RWN++A AARPNPQGS+ YG+I +T ++N + ++GK
Sbjct: 311 PEAPVGW--AWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSAS-KVDGK 367
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP-------KVDTSLINGTY 439
R LNG+S++ P TPL LA+ F + A K+ F Y + P K+ +++N T+
Sbjct: 368 LRYALNGVSHVDPETPLKLAEYFGV--ADKV-FKYDTIKDNPPAKITKIKIQPNVLNITF 424
Query: 440 KGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGA 499
+ F+EIIF+N++ ++QS+H+DGY+FF V ++ G WT R YN D V+R T QV+P +
Sbjct: 425 RTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKS 484
Query: 500 WTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSL 558
W AIL+ DNAG+WN+R+EN + YLGQ++Y +V++PE + +P+NA+ CG + L
Sbjct: 485 WAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKGL 544
Query: 559 QK 560
K
Sbjct: 545 PK 546
|
Length = 552 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 566 bits (1460), Expect = 0.0
Identities = 264/554 (47%), Positives = 350/554 (63%), Gaps = 28/554 (5%)
Query: 14 FFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVV 73
F I L +L + P V Y W +SY LG +QVI IN FPGP+LN T N +
Sbjct: 9 FVLISLVILELSYAFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVIN 68
Query: 74 VNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPS 133
VN+ N+L EP L+TWNG+Q RKNSWQDGV GTNCPI G NWTY+FQVKDQIGS+FYFPS
Sbjct: 69 VNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPS 128
Query: 134 LDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVP 193
L Q+AAGGYG I I N +++P+PF PD + I I DW+ H +R ++NG L P
Sbjct: 129 LLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGHSLPNP 188
Query: 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253
DGIL NG GP EPGKTYRLR+ NVG+ T LNFRIQ+H++LLV
Sbjct: 189 DGILFNGRGPEE------------TFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLV 236
Query: 254 ETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASS---DYYIVASPRFVNSSEWNKVTGV 310
ETEG+Y ++ Y+++DIHVGQS+S LVT + YYIVA+ RF ++ + GV
Sbjct: 237 ETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDA----YLGGV 292
Query: 311 AILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVT 370
A++ Y NS GPLP P +D + S+ QA SIR +++ GAAR NPQGS+ YG+I VT
Sbjct: 293 ALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVT 352
Query: 371 DVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLD-FPYKLMSRAPK 429
+IL+ L GK R T+NG+S++ P TPL L F + FP ++ P
Sbjct: 353 RT-IILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPT 411
Query: 430 VDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVA 489
+ TS+++ YK F I+FQN +++SYH+DGY FFVVG FG W+E+ + YN D V+
Sbjct: 412 LGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVS 471
Query: 490 RSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNV--INPEIDKSAPL--- 544
RST QV+P +WTAIL+ +DN G+WN+R++ + WYLGQE+Y+ V E + P+
Sbjct: 472 RSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDE 531
Query: 545 --LPDNAIYCGLLS 556
+P N I CG +S
Sbjct: 532 NPIPGNVIRCGKVS 545
|
Length = 545 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 562 bits (1450), Expect = 0.0
Identities = 275/534 (51%), Positives = 354/534 (66%), Gaps = 33/534 (6%)
Query: 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLL 86
G DPY +Y WT++Y T SPLG QQVI INGQFPGP L+V TN N+++N+ N LD+P LL
Sbjct: 25 GEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLL 84
Query: 87 TWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGI 146
TWNG++ RKNSWQDGVLGTNCPIP N+TY+FQ KDQIG+F YFPS F +AAGG+G I
Sbjct: 85 TWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAI 144
Query: 147 IINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
+ R IP+PF +PDGD T+ + DWY SHK L++ +++G L PDG+LING
Sbjct: 145 NVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGKVLPFPDGVLINGQ----- 199
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
+ + GKTY R+ NVG+STSLNFRIQ H + LVE EGS+T+Q Y
Sbjct: 200 ---------TQSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYD 250
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
++D+HVGQS + LVT +Q + DYYIVAS RF +T A+LHYSNS PASGPL
Sbjct: 251 SLDVHVGQSVAVLVTLNQ-SPKDYYIVASTRFTRQ----ILTATAVLHYSNSRTPASGPL 305
Query: 327 PDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK 386
P P + + ++SM QAR+ RWN++A AARPNPQGSF YG+IT T V+ N A LI GK
Sbjct: 306 PALP-SGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANS-APLINGK 363
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK-VDTSLINGTYKGFMEI 445
R +NG+SY+ TPL LA F IPG + ++ L S P V TS++ + F+E+
Sbjct: 364 QRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEV 423
Query: 446 IFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILV 505
+FQNN+ T+QS+H+DGY F+VVG G WT R YN D + R T QV+P +WT ILV
Sbjct: 424 VFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILV 483
Query: 506 YLDNAGIWNLRAENLDTWYLGQEVYVNVINP------EIDKSAPLLPDNAIYCG 553
LDN G+WN+R+ + YLGQ+ Y+ V N E D +PDNA+ CG
Sbjct: 484 SLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYD-----IPDNALLCG 532
|
Length = 539 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 523 bits (1347), Expect = 0.0
Identities = 262/542 (48%), Positives = 353/542 (65%), Gaps = 23/542 (4%)
Query: 18 LLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVK 77
LL+L++ DPY F++W ++Y SPLG QQ I ING+FPGP + TN N+++NV
Sbjct: 15 LLFLISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVF 74
Query: 78 NDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ 137
N LDEP L++W+G+++ +NS+QDGV GT CPIP G N+TY QVKDQIGSF+YFPSL F
Sbjct: 75 NHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFH 134
Query: 138 RAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGIL 197
+AAGG+G I I++R +IP+PF P D T+ I DWY +HK LR ++NG L +PDGIL
Sbjct: 135 KAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGIL 194
Query: 198 INGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEG 257
ING G +N+EPGKTYRLR+ NVG+ SLNFRIQNH + LVE EG
Sbjct: 195 INGRG-------------SGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEG 241
Query: 258 SYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSN 317
++T+Q ++++D+HVGQS+S L+T DQ A DYYIV S RF + + +LHYSN
Sbjct: 242 THTIQTPFSSLDVHVGQSYSVLITADQPA-KDYYIVVSSRFTSKI----LITTGVLHYSN 296
Query: 318 SLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILN 377
S GP SGP+PD P +S +QAR+I+ N++A RPNPQGS+ YG+I +T + N
Sbjct: 297 SAGPVSGPIPDGPIQLS--WSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLAN 354
Query: 378 RPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKL-DFPYKLMSRAPKVDTSLIN 436
IEGK R +N S+ P TPL LA F I G Y P + + A TS++
Sbjct: 355 SAGN-IEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQ 413
Query: 437 GTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVF 496
YK F+EI+F+N + VQ++H+DGY+F+VVGM+ G W+ SR YN D V+R T QV+
Sbjct: 414 TDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVY 473
Query: 497 PGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLL 555
P +WTAI V LDN G+WNLR+E + YLGQ+ Y+ V + L+P NA+ CG
Sbjct: 474 PRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRA 533
Query: 556 SS 557
+
Sbjct: 534 TG 535
|
Length = 543 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 517 bits (1333), Expect = e-179
Identities = 260/541 (48%), Positives = 345/541 (63%), Gaps = 37/541 (6%)
Query: 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT 87
D FY+W ++Y S L ++ I INGQFPGP + TN N+V+NV NDLDEP LL+
Sbjct: 14 DDTL-FYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLS 72
Query: 88 WNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
WNGV RKNS+QDGV GT CPIP G N+TY FQVKDQ+GS+FYFPSL Q+AAGGYG +
Sbjct: 73 WNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLR 132
Query: 148 INNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDL-GVPDGILINGLG-PYR 205
I + IP+PF P GD T I DWY ++H L+K ++ G L +PDG++ING G Y
Sbjct: 133 IYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGVSYV 192
Query: 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNY 265
Y I V+ GKTYR R+ NVG+ TSLNF I H L L+E EG++TVQ Y
Sbjct: 193 YS------------ITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMY 240
Query: 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLG----P 321
T++DIHVGQ++S LVT DQ +Y IV S RF+ + KV + LHYSNS G
Sbjct: 241 TSLDIHVGQTYSVLVTMDQ-PPQNYSIVVSTRFIAA----KVLVSSTLHYSNSKGHKIIH 295
Query: 322 ASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAE 381
A P PD D +S+ QA+SIR N++A R NPQGS+ YG++ ++ +IL A
Sbjct: 296 ARQPDPD-----DLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRT-LILESSAA 349
Query: 382 LIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKL----DFPYKLMSRAPKVDTSLING 437
L++ K R +NG+S++P TPL LA F I G +K+ D P + ++DTS++
Sbjct: 350 LVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRR--GGGMRLDTSVMGA 407
Query: 438 TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP 497
+ F+EIIFQN + VQSYH+DGY F+VVG++ G+W+ SR YN D ++RSTTQV+P
Sbjct: 408 HHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYP 467
Query: 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLS 556
+WTA+ V LDN G+WNLR++ YLGQ+ Y+ V +P K LP NA+ CG S
Sbjct: 468 ESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRAS 527
Query: 557 S 557
+
Sbjct: 528 N 528
|
Length = 536 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 3e-75
Identities = 168/565 (29%), Positives = 261/565 (46%), Gaps = 72/565 (12%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQ 92
Y W + Y SP ++ VIGINGQFPGP + +VV + N L E +++ W+G++
Sbjct: 4 YKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIR 63
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
W DG G T C I G + Y F V D+ G++FY QR+AG YG +I++
Sbjct: 64 QIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVP 122
Query: 152 DVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDL--------GVPDGILINGLGP 203
D PF DG+ + +SDW+ KS E V L G P +LING G
Sbjct: 123 DGEKEPFHY-DGEFNLLLSDWWHKSIH------EQEVGLSSKPMRWIGEPQSLLINGRGQ 175
Query: 204 YRYDAAIVPDGIPY-------------QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNL 250
+ A Q+++VEPGKTYRLR+ + +LNF I+ H L
Sbjct: 176 FNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKL 235
Query: 251 LLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGV 310
+VE +G+Y ++DI+ G+++S L+TTDQ+ S +Y+I V + N G+
Sbjct: 236 TVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVG---VRGRKPNTPPGL 292
Query: 311 AILHY---SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQI 367
+L+Y S S P + P P P D S + +I +A + P+ S +
Sbjct: 293 TVLNYYPNSPSRLPPTPP-PVTPAWDDFDRSKAFSLAI---KAAMGSPKPPETSDR---- 344
Query: 368 TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP------- 420
V+LN I G + +N +S P TP + + ++N+ A+ P
Sbjct: 345 ----RIVLLN-TQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRD 399
Query: 421 YKLMSRAPKVDTSLINGTYK----GFMEIIFQN------NDTTVQSYHMDGYAFFVVGMD 470
Y + P +T+ NG Y+ +++I QN N++ +H+ G+ F+V+G
Sbjct: 400 YDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYG 459
Query: 471 FGVWTEN-SRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEV 529
G + +YN + R+T +FP WTA+ DN G+W ++G V
Sbjct: 460 EGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGV 519
Query: 530 YVNVINPEIDKSAPLLPDNAIYCGL 554
V ++K LP A+ CGL
Sbjct: 520 ---VFAEGVEKVGK-LPKEALGCGL 540
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 215 bits (548), Expect = 3e-62
Identities = 169/564 (29%), Positives = 267/564 (47%), Gaps = 72/564 (12%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQ 92
Y W + Y SP K+ VI ING+ PGP + V+V +KN L E + + W+G++
Sbjct: 27 YKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIR 86
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
W DG G T CPI G +TY+F V D+ G++ Y QR AG YG I ++
Sbjct: 87 QIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLP 145
Query: 152 DVIPLPFAVPDGDITIFISDWYTKS--HKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
PF+ D D +I ++DWY KS + L +G P +LI G G RY+ +
Sbjct: 146 RGKSEPFSY-DYDRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKG--RYNCS 202
Query: 210 IV--------------PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET 255
+V P+ PY L V PGKTYRLR+ ++ ++L+F+I+ HN+ +VE
Sbjct: 203 LVSSPYLKAGVCNATNPECSPYVL-TVVPGKTYRLRISSLTALSALSFQIEGHNMTVVEA 261
Query: 256 EGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
+G Y N+ I+ G+++S LV DQ+ S +Y++ S V S G+AI +Y
Sbjct: 262 DGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTS---VVSRNNTTPPGLAIFNY 318
Query: 316 -------SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQIT 368
S P SGPL + D +NQ+ +I+ G P P S +
Sbjct: 319 YPNHPRRSPPTVPPSGPLWN-----DVEPRLNQSLAIK--ARHGYIHPPPLTSDR----- 366
Query: 369 VTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP-------- 420
V V+LN E + G R ++N +S+ P TP ++A + N+ GA+ P
Sbjct: 367 ---VIVLLNTQNE-VNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFAN 422
Query: 421 YKLMSRAPKVDTSLINGTYK----GFMEIIFQN------NDTTVQSYHMDGYAFFVVGMD 470
Y + ++ + + + Y+ ++II QN N++ +H+ G+ F+V+G
Sbjct: 423 YDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYG 482
Query: 471 FGVWTE-NSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEV 529
G + + YN D + ++T V P WTA+ DN G+W +++G V
Sbjct: 483 EGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGV 542
Query: 530 YVNVINPEIDKSAPLLPDNAIYCG 553
V I++ LP + + CG
Sbjct: 543 ---VFEEGIERVGK-LPSSIMGCG 562
|
Length = 566 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 204 bits (520), Expect = 3e-58
Identities = 157/558 (28%), Positives = 264/558 (47%), Gaps = 57/558 (10%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQ 92
Y W + Y P + V+ +NGQFPGP ++ +VV++ N L E L++ W+G++
Sbjct: 26 YTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIR 85
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151
+ + W DG G T C I G +TY+F V ++ G+ FY QR+AG YG +I++
Sbjct: 86 QKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDVA 144
Query: 152 DVIPLPFAVPDGDITIFISDWYTKS--HKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
P DG+ + +SDW+ +S ++L + +G ILING G + A
Sbjct: 145 KG-PKERLRYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLA 203
Query: 210 IV--------------PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET 255
D Q + VEP KTYR+R+ + SLN +Q H L++VE
Sbjct: 204 AQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEA 263
Query: 256 EGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
+G+Y ++DI+ G+S+S L+TTDQ+ S +YYI V + N + IL+Y
Sbjct: 264 DGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVG---VRGRKPNTTQALTILNY 320
Query: 316 SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVI 375
+ PAS PP + ++++ + + P+P ++ ++
Sbjct: 321 VTA--PASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSPPKKYR-------KRLIL 371
Query: 376 LNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP-------YKLMSRAP 428
LN LI+G + +N +S + P+TP + + ++N+ + P Y +M+ P
Sbjct: 372 LN-TQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPP 430
Query: 429 KVDTSLINGTYKG----FMEIIFQNND------TTVQSYHMDGYAFFVVGMDFGVWTEN- 477
+T+ NG Y +++I QN + + + +H+ G+ F+V+G G +
Sbjct: 431 FPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGI 490
Query: 478 SRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQE-VYVNVINP 536
TYN + R+T ++P WTAI DN G+W ++G V+ +N
Sbjct: 491 DEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLN- 549
Query: 537 EIDKSAPLLPDNAIYCGL 554
I K +PD A+ CGL
Sbjct: 550 RIGK----IPDEALGCGL 563
|
Length = 574 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 8e-56
Identities = 138/503 (27%), Positives = 230/503 (45%), Gaps = 32/503 (6%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
Y + + + L + ++ +NG+FPGP L V+VNV N++ + + W+GV+
Sbjct: 6 YTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQ 65
Query: 94 RKNSWQDG-VLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152
+N W DG T CPI G ++ Y F + Q G+ ++ + + RA YG I+I +
Sbjct: 66 LRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATV-YGAIVILPKP 124
Query: 153 VIPLPFAVPDGDITIFISDWYTKSHKK-LRKDVENGVDLGVPDGILINGLGPYRYDAAIV 211
+P PF PD ++ I + +W+ + + + + G V D ING Y+ +
Sbjct: 125 GVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCS-S 183
Query: 212 PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271
D + VEPGKTY LR+ N ++ L F I NH L +VE + +YT + I
Sbjct: 184 KDTF---KLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
Query: 272 VGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPN 331
GQ+ + L+T DQ+ Y++ A P ++ T AIL Y + A LP P
Sbjct: 241 PGQTTNVLLTADQSPGR-YFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPA 299
Query: 332 AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNR-PAELIEG----K 386
DT + N + +R S +A+ + + + L+ P +G +
Sbjct: 300 YNDTAAATNFSNKLR---SLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTR 356
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYK------------LMSRAPKVDTSL 434
+ ++N IS++ P+T L+ A F I G + DFP + T +
Sbjct: 357 FAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKV 416
Query: 435 INGTYKGFMEIIFQN-NDTTVQSY--HMDGYAFFVVGMDFGVW-TENSRGTYNKWDGVAR 490
+ + +E++ Q+ + +++ H+ GY FFVVG FG + + +N D R
Sbjct: 417 VRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPER 476
Query: 491 STTQVFPGAWTAILVYLDNAGIW 513
+T V G W AI DN G+W
Sbjct: 477 NTVGVPTGGWAAIRFVADNPGVW 499
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 4e-47
Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 37 TISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN 96
T++Y T +PLG +QVIG+NGQFPGP + V VVVNV N+LDEP + W+G++
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTTIHWHGLRQPGT 60
Query: 97 SWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR-AAGGYGGIIINNRD 152
W DGV G T CPIP G ++TY+F VK Q G+++Y + + AAG YG III +
Sbjct: 61 PWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 4e-42
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 163 GDITIFISDWYTKSHKKLRKDVE-----NGVDLGVPDGILINGLGPYRYDAAIVPDGIPY 217
D I +SDWY K K L K++ VPD +LING G
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKD-----------GASL 49
Query: 218 QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFS 277
+ V PGKTYRLR+ NV + SLNF I+ H + +VE +G Y ++DI GQ +S
Sbjct: 50 ATLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYS 109
Query: 278 FLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
LVT +Q+ +Y+IVASP ++ T AIL YS +
Sbjct: 110 VLVTANQD-PGNYWIVASPNIPA---FDNGTAAAILRYSGA 146
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 5e-30
Identities = 43/139 (30%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 401 TPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMD 460
TP L I G P T +I +EI+ QNN +H+
Sbjct: 2 TPPKLPTLLQITGGNDRANWSPDNG-PPLGTTEVITLPNGDRVEIVLQNNTMGPHPFHLH 60
Query: 461 GYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENL 520
G++F V+G G WT + TYN D V R T QV PG W AI DN G W L
Sbjct: 61 GHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCHIL 118
Query: 521 DTWYLGQEVYVNVINPEID 539
W+L Q + +
Sbjct: 119 --WHLDQGMMGQFVVDPGS 135
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-25
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 55 INGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGV-LGTNCPIPAG 112
+NG PGP + + + V ND+ D + + W+G+ R + DG L + PIP G
Sbjct: 32 VNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPIPPG 91
Query: 113 WNWTYQFQVK-DQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISD 171
+ Y+ + + GS+FY + FQ A +G +I+ D P P+ D + + +SD
Sbjct: 92 HFFDYEIKPEPGDAGSYFYHSHVGFQ-AVTAFGPLIV--EDCEPPPYKY-DDERILLVSD 147
Query: 172 WYTKSHKKLRKDVENGVD------LGVPDGILINGLG-PYRYDAAIVPDG-IPYQLINVE 223
+++ + + ++E G+ G + +L+NG + A I P G +I+VE
Sbjct: 148 FFSATDE----EIEQGLLSTPFTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVE 203
Query: 224 PGKTYRLRVHNVGISTSLNFRIQNHNLL-LVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282
PGKTYRLR + ++ I++H L ++E +GSYT ++ + GQ +S L
Sbjct: 204 PGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVLFKA 263
Query: 283 DQNAS------SDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPP 330
Y+I +F G A+L Y + +P+ P
Sbjct: 264 KTEDELCGGDKRQYFI----QFETRDRPKVYRGYAVLRYRSDKASKLPSVPETP 313
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 1e-17
Identities = 54/246 (21%), Positives = 88/246 (35%), Gaps = 23/246 (9%)
Query: 54 GINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAG 112
G NG PGP + V V +++ N L + W+G+ DGV T P G
Sbjct: 56 GYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGL--PVPGEMDGVPPLTQIPPGPG 113
Query: 113 WNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDW 172
TY F D G+++Y P Q G G +II D P V D + + DW
Sbjct: 114 ETPTYTFTQ-DVPGTYWYHPHTHGQVYDGLAGALIIE--DENSEPLGVDDEPVILQ-DDW 169
Query: 173 YTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRV 232
+ G +G + D +V +G V PG RLR+
Sbjct: 170 LD--------------EDGTDLYQEGPAMGGFPGDTLLV-NGAILPFKAV-PGGVVRLRL 213
Query: 233 HNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYI 292
N G + + + + L ++ +G + + + G+ + LV + +
Sbjct: 214 LNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMNDGGAVTLTA 273
Query: 293 VASPRF 298
+
Sbjct: 274 LGEDMP 279
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 6e-15
Identities = 75/296 (25%), Positives = 115/296 (38%), Gaps = 44/296 (14%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
+D TI + G + I +NG PGP+L V + V N L E + W+G+
Sbjct: 48 FDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILL 107
Query: 94 RKNSWQDGVLGTNCP-IPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152
DGV G + I G +TY+F V+ Q G+++Y FQ AG YG +II+
Sbjct: 108 PFQ--MDGVPGVSFAGIAPGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIID--P 162
Query: 153 VIPLPFAVPDGDITIFISDW---------------------YTKSHKKLRKDV-ENGVDL 190
P P D + + +SDW Y ++ +DV +G+
Sbjct: 163 AEPDPVRA-DREHVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQ 221
Query: 191 GVPDGILINGLGPYRYDAAIVPDGIPYQLIN-----------VEPGKTYRLRVHNVGIST 239
+ D + + D A V L+N PG+ RLR N T
Sbjct: 222 TLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMT 281
Query: 240 SLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVT-TDQNASSDYYIVA 294
+ RI L +V +G Y + I ++F +V T +A + I A
Sbjct: 282 YFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPTGDDA---FTIFA 334
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 75/299 (25%), Positives = 113/299 (37%), Gaps = 58/299 (19%)
Query: 54 GINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGW 113
G NG GP + + V V++ N L E L W+G++ DG G I G
Sbjct: 69 GYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPGE--VDG--GPQGIIAPGG 124
Query: 114 NWTYQFQVKDQIGSFFYF-PSLD----FQRAAGGYGGIIINNRDVIPLPFAVPDG--DIT 166
T F V DQ + +F P Q A G G ++I + + + L G DI
Sbjct: 125 KRTVTFTV-DQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIP 183
Query: 167 IFISDWYTKSHKKLRKDVENGVDLGV--------PDGILINGLGPYRYDAAIVPDGIPYQ 218
+ + D K+ D + L V D +L NG Y P G
Sbjct: 184 VILQD------KRFSADGQIDYQLDVMTAAVGWFGDTLLTNGA---IYPQHAAPRGW--- 231
Query: 219 LINVEPGKTYRLRVHNVGISTSLNFRIQ-NHNLLLVETEG---SYTVQQNYTNMDIHVGQ 274
RLR+ N + SLN L ++ ++G + V+ + + I +G+
Sbjct: 232 ---------LRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVK--VSELPILMGE 280
Query: 275 SFSFLVTTDQNASSDYYIVASPRFVNSS-----EWNKVTGVAILHYSNSLGPASGPLPD 328
F LV T + D +V P V+ ++K + +L L ASG LPD
Sbjct: 281 RFEVLVDTSDGKAFD--LVTLP--VSQMGMALAPFDKP--LPVLRIQPLLISASGTLPD 333
|
Length = 523 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.95 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.79 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.64 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.56 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.45 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.1 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.0 | |
| PLN02835 | 539 | oxidoreductase | 98.98 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 98.97 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.92 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 98.89 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.89 | |
| PLN02792 | 536 | oxidoreductase | 98.88 | |
| PLN02991 | 543 | oxidoreductase | 98.88 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.79 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.71 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 98.66 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.65 | |
| PLN02604 | 566 | oxidoreductase | 98.64 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.58 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.54 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.52 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.36 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.29 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.25 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 98.1 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.01 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 97.91 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.88 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.86 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.78 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 97.55 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.48 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.34 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.32 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.26 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 97.18 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.86 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.27 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 95.67 | |
| PRK02710 | 119 | plastocyanin; Provisional | 95.6 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 94.76 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 94.03 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 94.03 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 93.84 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 93.56 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.43 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 93.35 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 92.8 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 92.33 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 92.11 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 91.19 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 89.77 | |
| TIGR03079 | 399 | CH4_NH3mon_ox_B methane monooxygenase/ammonia mono | 87.25 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 84.98 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 84.15 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 83.44 | |
| COG4263 | 637 | NosZ Nitrous oxide reductase [Energy production an | 81.33 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 81.09 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 80.36 |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-118 Score=970.36 Aligned_cols=542 Identities=74% Similarity=1.291 Sum_probs=458.1
Q ss_pred cccCCCeEEEEEEEEEEEecCCC--eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASPLG--DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~~G--~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
+.|++++++|+|++++..++||| ..+++++|||++|||+|++++||+|+|+|+|+|+++++|||||++|+.++|+||+
T Consensus 21 ~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~~t~w~DGv 100 (596)
T PLN00044 21 AGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGV 100 (596)
T ss_pred cccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCccCCCCccccCC
Confidence 56778899999999999999999 5568999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCC-CceeEeeeccccccHHHHH
Q 007633 103 LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPD-GDITIFISDWYTKSHKKLR 181 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~l~ 181 (595)
++|||||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.||..++ +|++|+|+||++.+...+.
T Consensus 101 ~~TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~ 180 (596)
T PLN00044 101 GGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALR 180 (596)
T ss_pred CCCcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHHHH
Confidence 889999999999999999988999999999999999999999999999877666775544 7999999999999877776
Q ss_pred HHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee
Q 007633 182 KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV 261 (595)
Q Consensus 182 ~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~ 261 (595)
..+..|...+.+|.++|||++.+.++|+........+.++|++||+|||||||++..+.+.|+|+||+|+|||+||.+++
T Consensus 181 ~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~DG~~v~ 260 (596)
T PLN00044 181 RALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTS 260 (596)
T ss_pred HHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeCCcccC
Confidence 66666665667899999999986665553333445578999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCC-CCCcccccc
Q 007633 262 QQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPN-AYDTYFSMN 340 (595)
Q Consensus 262 p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~-~~~~~~~~~ 340 (595)
|..++++.|++||||||+|+++|+++++|||++..++..........+.|||+|.++....+.++|..+. .++..++.+
T Consensus 261 P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~~~P~~p~~~~d~~~~~~ 340 (596)
T PLN00044 261 QQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSIN 340 (596)
T ss_pred ceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCCCCCCCCcccCCchhhhh
Confidence 9999999999999999999999876548999997653222113456788999998765322223444332 334444555
Q ss_pred cccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCC
Q 007633 341 QARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP 420 (595)
Q Consensus 341 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~ 420 (595)
+.+.++++.......+.|+++.++...++.+.+.+........+|+.+|+|||++|..|++|++++.+++..++|+.+++
T Consensus 341 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~~~~gv~~~~fp 420 (596)
T PLN00044 341 QARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLDFP 420 (596)
T ss_pred hhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCCcchhhhhccCCCcccCCCC
Confidence 55666666665556677777666655555555443321111223678999999999999999998888888899988888
Q ss_pred CCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcE
Q 007633 421 YKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAW 500 (595)
Q Consensus 421 ~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~ 500 (595)
+.|.+......+.++.+++|++|||+|+|.....||||||||+|+||++|.|.|++.+++.||++||++|||+.|+++||
T Consensus 421 ~~pp~~~~~~~t~v~~~~~n~~VeiV~qn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nPp~RdTv~vp~~gW 500 (596)
T PLN00044 421 NHPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAW 500 (596)
T ss_pred CCCCccccccCceEEEcCCCCEEEEEEeCCCCCCCCeeEcCccEEEEeecCCCCCCCcccccccCCCCccceEEeCCCCe
Confidence 77765555667889999999999999999877789999999999999999999998877889999999999999999999
Q ss_pred EEEEEEecCcceeEEeeccccceeccceEEEEEecCCCC--CCCCCCCCccccccCccCCCccccccc
Q 007633 501 TAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID--KSAPLLPDNAIYCGLLSSLQKDQAQRI 566 (595)
Q Consensus 501 ~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~--~~~~~~p~~~~~c~~~~~~~~~~~~~~ 566 (595)
++|||++||||+|+||||++.|++.||++++.|.++.+. .++.++|++.+.||..+++++++.+++
T Consensus 501 ~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~~~Cg~~~~~~~~~~~~~ 568 (596)
T PLN00044 501 TAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCGALSSLQKEQSHRF 568 (596)
T ss_pred EEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCcccCcccccccCCCCCCCcc
Confidence 999999999999999999999999999999999987753 678889999999999999888777653
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-115 Score=940.22 Aligned_cols=525 Identities=50% Similarity=0.905 Sum_probs=448.6
Q ss_pred HHHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCc
Q 007633 12 VSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGV 91 (595)
Q Consensus 12 ~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~ 91 (595)
.++++.|++|++++.|++++++|+|++++..++|||+.+++++|||++|||+|++++||+|+|+|+|+|+++++|||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi 88 (543)
T PLN02991 9 TAMILGLLFLISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGI 88 (543)
T ss_pred HHHHHHHHHHHhhhhccCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCc
Confidence 45788888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeec
Q 007633 92 QHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISD 171 (595)
Q Consensus 92 ~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d 171 (595)
+|.+++||||+++|||||+||++|+|+|++++|+||||||||.+.|+++|++|+|||++++..+.|+..+|+|++++|+|
T Consensus 89 ~q~~~~~~DGv~~tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~D 168 (543)
T PLN02991 89 RNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGD 168 (543)
T ss_pred ccCCCccccCCCCCCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecc
Confidence 99999999999999999999999999999977999999999999999999999999999876667776778999999999
Q ss_pred cccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCcee
Q 007633 172 WYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLL 251 (595)
Q Consensus 172 ~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~ 251 (595)
|+++....+...+..+...+++|.+||||++. .+.++|++||+|||||||+|..+.+.|+|+||+|+
T Consensus 169 W~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-------------~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~t 235 (543)
T PLN02991 169 WYKTNHKDLRAQLDNGGKLPLPDGILINGRGS-------------GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMK 235 (543)
T ss_pred eecCCHHHHHHHhhcCCCCCCCCEEEEccCCC-------------CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEE
Confidence 99997766655555666667899999999985 26799999999999999999999999999999999
Q ss_pred EEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 007633 252 LVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPN 331 (595)
Q Consensus 252 via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~ 331 (595)
|||+||.+++|..++++.|++||||||+|+++++++ +|||++...+... .....|||+|.++..+.+.+.|..+.
T Consensus 236 VIa~DG~~~~p~~~~~l~i~~GQRydvlv~a~~~~~-~y~i~~~~~~~~~----~~~~~AIl~Y~g~~~~~~~~~p~~p~ 310 (543)
T PLN02991 236 LVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAK-DYYIVVSSRFTSK----ILITTGVLHYSNSAGPVSGPIPDGPI 310 (543)
T ss_pred EEEeCCccccceeeeEEEEcCCcEEEEEEECCCCCC-cEEEEEeeccCCC----CcceEEEEEeCCCCCCCCCCCCCCCc
Confidence 999999999999999999999999999999999888 9999998754432 25678999998765322223444332
Q ss_pred CCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCC
Q 007633 332 AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI 411 (595)
Q Consensus 332 ~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~ 411 (595)
+..++.++....+.++.+....+.|..++.+...++++++.+..... ..+++.+|+|||++|..|++|++.+.+++.
T Consensus 311 --~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~ 387 (543)
T PLN02991 311 --QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAG-NIEGKQRYAVNSASFYPADTPLKLADYFKI 387 (543)
T ss_pred --cccccccchhhhhhcccCCCCCCCCCccccccccccceeEEEeeccc-ccCceEEEEECCCccCCCCCChhhhhhhcc
Confidence 22334433333445555545555666555544455666665543221 234678999999999999999998888877
Q ss_pred CCccccC-CCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcc
Q 007633 412 PGAYKLD-FPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVAR 490 (595)
Q Consensus 412 ~~~~~~~-~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~r 490 (595)
+|+|+.+ +++.+.++......+++.++++++|||+|+|.+...||||||||+||||++|.|.|++.+.+.||+.||++|
T Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP~rR 467 (543)
T PLN02991 388 AGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSR 467 (543)
T ss_pred cCccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcceEEEEeCCCCCCcccccccCCCCCCcc
Confidence 8888764 555555555555678889999999999999998889999999999999999999999876678999999999
Q ss_pred cEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccccCccC
Q 007633 491 STTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSS 557 (595)
Q Consensus 491 DTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c~~~~~ 557 (595)
||+.|+++||++|||++||||+|+|||||..|+..||+++++|.+++.. .++.++|++.+.||..++
T Consensus 468 DTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg~~~~ 535 (543)
T PLN02991 468 CTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATG 535 (543)
T ss_pred cEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccccCCC
Confidence 9999999999999999999999999999999999999999999987776 678889999999986655
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-113 Score=933.20 Aligned_cols=536 Identities=50% Similarity=0.896 Sum_probs=439.6
Q ss_pred HHHHHHHHHh---hccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeC
Q 007633 13 SFFFILLWLL---NGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWN 89 (595)
Q Consensus 13 ~~~~~~~~~~---~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~H 89 (595)
+++.|+|+++ ..+.|++++++|+|++++.+.+|||+.+++++|||++|||+|++++||+|+|+|+|+|+++++||||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~~~ttiHWH 85 (552)
T PLN02354 6 LLAVLLCLAAAVALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWS 85 (552)
T ss_pred HHHHHHHHHHHHHHhhhccccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCCCCcccccc
Confidence 4455555443 3345567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEee
Q 007633 90 GVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFI 169 (595)
Q Consensus 90 G~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l 169 (595)
|++|++++|+||+++|||||+||++|+|+|++.+|+||||||||.+.|+++||+|+|||++++..+.||+.+|+|+++++
T Consensus 86 Gi~q~~~~~~DGv~~TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l~l 165 (552)
T PLN02354 86 GIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLI 165 (552)
T ss_pred cccCCCCcccCCCcCCcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCceEEEEe
Confidence 99999999999999999999999999999999779999999999999999999999999998766677777789999999
Q ss_pred eccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCc
Q 007633 170 SDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN 249 (595)
Q Consensus 170 ~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~ 249 (595)
+|||++....+...+..+...+.+|.+||||++.+.| ....+.++|++||+|||||||+|....+.|+|+||+
T Consensus 166 ~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~-------~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~ 238 (552)
T PLN02354 166 GDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSGKGD-------GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHK 238 (552)
T ss_pred eeeccCCHHHHHHHHhcCCCCCCCCeEEEeCCcCCCC-------CCCceEEEECCCCEEEEEEEecCCCceEEEEECCce
Confidence 9999998777766666666567789999999975432 123578999999999999999999999999999999
Q ss_pred eeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCC
Q 007633 250 LLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDP 329 (595)
Q Consensus 250 ~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~ 329 (595)
|+|||+||.+++|..++++.|++||||||+|++++++| +|||++...+... .....|||+|.++..+.+.+.|..
T Consensus 239 ~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g-~Y~i~a~~~~~~~----~~~~~ail~Y~g~~~~~~~~~p~~ 313 (552)
T PLN02354 239 MKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPK-DYYMVASTRFLKK----VLTTTGIIRYEGGKGPASPELPEA 313 (552)
T ss_pred EEEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCC-cEEEEEeccccCC----CccEEEEEEECCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999998888 9999998654322 267789999987654332223332
Q ss_pred CCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhc
Q 007633 330 PNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQF 409 (595)
Q Consensus 330 p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~ 409 (595)
+. +..++.+++..++.++.+....|.+.....+...++++++.+..+.. ..++..+|+|||++|..|++|++.+.++
T Consensus 314 ~~--~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iNn~s~~~p~~P~L~~~~~ 390 (552)
T PLN02354 314 PV--GWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSAS-KVDGKLRYALNGVSHVDPETPLKLAEYF 390 (552)
T ss_pred Cc--ccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccc-cCCceEEEEECCccCCCCCCChHHhhhh
Confidence 21 22223334444444444444444454443333445666666654221 2346788999999999999999887765
Q ss_pred CC-CCccccC-CCCCCC--CCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCC
Q 007633 410 NI-PGAYKLD-FPYKLM--SRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKW 485 (595)
Q Consensus 410 ~~-~~~~~~~-~~~~p~--~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~ 485 (595)
+. .|.|+.+ +++.|. ......+.+++.+++|++|||+|+|.+...||||||||+||||++|.|.|++.....||+.
T Consensus 391 ~~~~g~~~~~~~~~~pp~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~nl~ 470 (552)
T PLN02354 391 GVADKVFKYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLL 470 (552)
T ss_pred cccCCccccCccccCCccccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccEEEEeecCCCCCccccccCCcC
Confidence 44 3666643 233222 1223456688899999999999999988899999999999999999999998766789999
Q ss_pred CCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccccCccCCCcccc
Q 007633 486 DGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSLQKDQA 563 (595)
Q Consensus 486 ~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c~~~~~~~~~~~ 563 (595)
||++|||+.|+++||++|||++||||+|+|||||+.|+++||++++.|.+++.. +++.++|++.+.|+..+++++++.
T Consensus 471 nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~ 549 (552)
T PLN02354 471 DAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKGLPKPPP 549 (552)
T ss_pred CCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCccccccccccCCCCCCC
Confidence 999999999999999999999999999999999999999999999999976655 566778999999998888766554
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-113 Score=927.03 Aligned_cols=515 Identities=49% Similarity=0.856 Sum_probs=438.1
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCC
Q 007633 26 FGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGT 105 (595)
Q Consensus 26 ~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~t 105 (595)
...+++++|+|++++...++||+.+++++|||++|||+|++++||+|+|+|+|+|+++++|||||++|++++|+||++++
T Consensus 11 ~~~~~~~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~t 90 (536)
T PLN02792 11 VKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGT 90 (536)
T ss_pred hhcCCeEEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCCC
Confidence 34455679999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHh
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~ 185 (595)
||||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.|++.+|+|++++++||++.+...+.+.++
T Consensus 91 qcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~~~~ 170 (536)
T PLN02792 91 TCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILD 170 (536)
T ss_pred cCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHHHhh
Confidence 99999999999999998799999999999999999999999999876656677677899999999999988777666666
Q ss_pred CCCCCC-CCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeee
Q 007633 186 NGVDLG-VPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264 (595)
Q Consensus 186 ~g~~~~-~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~ 264 (595)
.+...+ .+|.+||||++..++ +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|..
T Consensus 171 ~g~~~~~~~d~~liNG~~~~~~-----------~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~ 239 (536)
T PLN02792 171 GGRKLPLMPDGVMINGQGVSYV-----------YSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSM 239 (536)
T ss_pred ccCcCCCCCCEEEEeccCCCCc-----------ceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcc
Confidence 655434 789999999987443 78999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 265 ~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
++++.|++||||||+|++++++| +|||++...+.+. ...+.|||+|.++..... ..|..|...+..++.+....
T Consensus 240 ~~~l~i~~GqRydVlV~a~~~~g-~Y~i~a~~~~~~~----~~~~~ail~Y~g~~~~~~-~~p~~p~~~~~~~~~~~~~~ 313 (536)
T PLN02792 240 YTSLDIHVGQTYSVLVTMDQPPQ-NYSIVVSTRFIAA----KVLVSSTLHYSNSKGHKI-IHARQPDPDDLEWSIKQAQS 313 (536)
T ss_pred eeEEEEccCceEEEEEEcCCCCc-eEEEEEEeccCCC----CCceEEEEEECCCCCCCC-CCCCCCCcCCccccccchhh
Confidence 99999999999999999998877 9999998765432 257789999987643211 12222222244455544445
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCcccc-CCCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKL-DFPYKL 423 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~-~~~~~p 423 (595)
++.++.+..+.+.|++++++....+++++.+..... ..+++.+|+|||++|..|++|++.+.++++.|+|+. ++++.|
T Consensus 314 ~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iN~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~p 392 (536)
T PLN02792 314 IRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAA-LVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKP 392 (536)
T ss_pred hhhccCCCCCCCCCCcccccceeccceeEEeccccc-ccCceeEEEECCcccCCCCCchhhhhhhccCCCcCcccCccCC
Confidence 555665555566777777666666667766554222 234578899999999999999999888777788865 355544
Q ss_pred CC-CCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEE
Q 007633 424 MS-RAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502 (595)
Q Consensus 424 ~~-~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~ 502 (595)
.. +....+++++.+++|++|||+|+|.+...||||||||+||||++|.|.|++...+.||+.||++||||.|+++||++
T Consensus 393 ~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~a 472 (536)
T PLN02792 393 RRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTA 472 (536)
T ss_pred cccCCCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCceEEEeecCCCCCcccccccCcCCCCccceEEECCCCEEE
Confidence 42 22334678899999999999999988889999999999999999999999877778999999999999999999999
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccccCccCC
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSL 558 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c~~~~~~ 558 (595)
|||++||||+|+||||++.|+..||+++|.|.+++.. .++.++|++.+.||..+++
T Consensus 473 IRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~Cg~~~~~ 529 (536)
T PLN02792 473 VYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNK 529 (536)
T ss_pred EEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCccccccCC
Confidence 9999999999999999999999999999999987766 6788899999999977664
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-112 Score=924.91 Aligned_cols=514 Identities=52% Similarity=0.914 Sum_probs=431.7
Q ss_pred hccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 23 NGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 23 ~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
+...+.+++++|+|++++...++||+++++|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|++++||||+
T Consensus 21 ~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~~~~~~DGv 100 (539)
T PLN02835 21 SLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGV 100 (539)
T ss_pred hhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcccCCCCCCCCC
Confidence 33455668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHH
Q 007633 103 LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
++|||||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.|+..+|+|++++++||+++....+..
T Consensus 101 ~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~ 180 (539)
T PLN02835 101 LGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQ 180 (539)
T ss_pred ccCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeeccccCCHHHHHH
Confidence 99999999999999999987799999999999999999999999999766556677778999999999999998777666
Q ss_pred HHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee
Q 007633 183 DVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ 262 (595)
Q Consensus 183 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p 262 (595)
.+..|...+.+|.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 181 ~~~~g~~~~~~d~~liNG~~~--------------~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p 246 (539)
T PLN02835 181 RLDSGKVLPFPDGVLINGQTQ--------------STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQ 246 (539)
T ss_pred HhhcCCCCCCCceEEEccccC--------------ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccCCC
Confidence 666666677899999999987 789999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccc
Q 007633 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQA 342 (595)
Q Consensus 263 ~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~ 342 (595)
..++++.|++||||||+|++++++| +|||++...+... .....|||+|.++..+.+.++|..+. .+..++...+
T Consensus 247 ~~~~~l~i~~GqRydvlv~~~~~~g-~y~i~a~~~~~~~----~~~~~ail~Y~~~~~~~~~~~p~~p~-~~~~~~~~~~ 320 (539)
T PLN02835 247 NIYDSLDVHVGQSVAVLVTLNQSPK-DYYIVASTRFTRQ----ILTATAVLHYSNSRTPASGPLPALPS-GELHWSMRQA 320 (539)
T ss_pred ceeeEEEECcCceEEEEEEcCCCCC-cEEEEEEccccCC----CcceEEEEEECCCCCCCCCCCCCCCc-cccccccchh
Confidence 9999999999999999999998887 9999986543322 25678999998765433334444331 1111233333
Q ss_pred cccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccC-CCC
Q 007633 343 RSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLD-FPY 421 (595)
Q Consensus 343 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~-~~~ 421 (595)
....+.+.+....+.+..++.+....+++++.+..... ..+|..+|++||++|..|+.|++++.+++.++.|+.. +..
T Consensus 321 ~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~ 399 (539)
T PLN02835 321 RTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAP-LINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQS 399 (539)
T ss_pred hccccccCccccCCCCCccccccccCCCceEEEecccc-ccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCcccc
Confidence 44444455555555555444444445566665543221 3456789999999999999999888777667788743 222
Q ss_pred CCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEE
Q 007633 422 KLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWT 501 (595)
Q Consensus 422 ~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~ 501 (595)
.+.+...+.+++++.+++|++|||+|+|.+...||||||||+||||++|.|.|++.....||+.||++|||+.|+++||+
T Consensus 400 ~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~ 479 (539)
T PLN02835 400 LPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWT 479 (539)
T ss_pred CCCCCccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEE
Confidence 33333356678899999999999999999888999999999999999999999876666789999999999999999999
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccccCccC
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSS 557 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c~~~~~ 557 (595)
+|||++||||+|+|||||++|+..||+++++|.++.+. .++.++|++.+.||..++
T Consensus 480 ~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 480 TILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred EEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence 99999999999999999999999999999999987665 668888999999996655
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-112 Score=913.39 Aligned_cols=529 Identities=45% Similarity=0.738 Sum_probs=475.4
Q ss_pred HhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCC
Q 007633 21 LLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQD 100 (595)
Q Consensus 21 ~~~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~D 100 (595)
+..+..|+++++.|+|++++..+.++|++++++++||+||||+|+|++||+|+|+|.|+++++++|||||++|+.++|+|
T Consensus 18 ~~~~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~D 97 (563)
T KOG1263|consen 18 LVFFSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQD 97 (563)
T ss_pred HHHHhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccCCcccc
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccc-cHHH
Q 007633 101 GVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTK-SHKK 179 (595)
Q Consensus 101 Gv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~-~~~~ 179 (595)
|+.+|||||+||++|+|+|++++|.||||||+|++.|+++|++|+|||++++..+.|++.+|+|++|+++|||++ ++..
T Consensus 98 G~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~~ 177 (563)
T KOG1263|consen 98 GVYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHKN 177 (563)
T ss_pred CCccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHHH
Confidence 944599999999999999999989999999999999999999999999999988889989999999999999996 8888
Q ss_pred HHHHHhCCCCCCC-CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCc
Q 007633 180 LRKDVENGVDLGV-PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGS 258 (595)
Q Consensus 180 l~~~~~~g~~~~~-~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~ 258 (595)
+...++.++..+. +|.++|||+..+..+| .++++|++||+|||||+|+|....+.|+|+||+|+|||+||.
T Consensus 178 l~~~~~~~~~~p~~~D~~~iNg~~g~~~~~--------~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~ 249 (563)
T KOG1263|consen 178 LKNFLDRTGALPNPSDGVLINGRSGFLYNC--------TPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGA 249 (563)
T ss_pred HHHhhccCCCCCCCCCceEECCCCCcccCc--------eeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEEEecce
Confidence 8888777665554 8999999999655444 489999999999999999999999999999999999999999
Q ss_pred ceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCC---CCCCCCCc
Q 007633 259 YTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP---DPPNAYDT 335 (595)
Q Consensus 259 ~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp---~~p~~~~~ 335 (595)
+++|..++++.|+|||||||+|+++|.++ +|+|+++.++.+...+...+..++++|.++..+.+...| ..+..++.
T Consensus 250 y~~p~~~~~l~i~~GQ~~~vLvtadq~~~-~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~~~~~~ 328 (563)
T KOG1263|consen 250 YTKPFTTDSLDIHPGQTYSVLLTADQSPG-DYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASEKLPIYPFLPPGNDT 328 (563)
T ss_pred EEeeeeeceEEEcCCcEEEEEEeCCCCCC-cEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcccCcccccCCcccCc
Confidence 99999999999999999999999999999 999999998775432235889999999986555544322 23333466
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCC-CCc
Q 007633 336 YFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI-PGA 414 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~-~~~ 414 (595)
.++.++.+.++++++...++|+|+++++++...+.+.+.+.++.. ..+++.+++||+++|+.|++|.+++.++.. ++.
T Consensus 329 ~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~~~ 407 (563)
T KOG1263|consen 329 AWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDN-KNNGKLRASINNISFVTPKTPSLLAAYFKNIPGY 407 (563)
T ss_pred hhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCC-CCCcEEEEEEcceEEECCCCchhhhhhhccCCcc
Confidence 788999999999999999999999999999999999999887653 567899999999999999999999988765 566
Q ss_pred cccCCCCCCCC--C--CCccceeEEecCCCcEEEEEEEcCCC---ccceeeecCceEEEEEEeCCccCC--CCCCCCCCC
Q 007633 415 YKLDFPYKLMS--R--APKVDTSLINGTYKGFMEIIFQNNDT---TVQSYHMDGYAFFVVGMDFGVWTE--NSRGTYNKW 485 (595)
Q Consensus 415 ~~~~~~~~p~~--~--~~~~~~~v~~~~~g~~ve~vi~N~~~---~~HP~HlHG~~F~Vl~~g~G~~~~--~~~~~~n~~ 485 (595)
++.++++.|.. + .++.+++++.+++++.|||+|+|.+. +.||||||||+|||||+|.|+|++ +.+..||++
T Consensus 408 ~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~~~~~d~~~~yNl~ 487 (563)
T KOG1263|consen 408 FTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNWDPAKDPRKKYNLV 487 (563)
T ss_pred ccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEecccccCcCcChhhhcccC
Confidence 77678887732 2 23789999999999999999999875 458889999999999999999999 555789999
Q ss_pred CCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccccCccCCC
Q 007633 486 DGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYCGLLSSLQ 559 (595)
Q Consensus 486 ~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c~~~~~~~ 559 (595)
||+.||||.||||||++|||.|||||+|+||||+++|++.||+++|+|.+++.. +++.++|++.+.||..++.+
T Consensus 488 dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~cg~~~~~~ 562 (563)
T KOG1263|consen 488 DPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKCGRASGIP 562 (563)
T ss_pred CCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccccccCCcC
Confidence 999999999999999999999999999999999999999999999999998877 88999999999999987653
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-111 Score=914.17 Aligned_cols=511 Identities=50% Similarity=0.907 Sum_probs=421.4
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNC 107 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~ 107 (595)
.+++++|+|++++.+++|||+.+++++|||++|||+|++++||+|+|+|+|+|+++++|||||++|..++||||+++|||
T Consensus 23 ~a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~gtQc 102 (545)
T PLN02168 23 FAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNC 102 (545)
T ss_pred cccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCCCcC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhCC
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g 187 (595)
||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.|+..+++|+.|+++||++.+...+...+..+
T Consensus 103 pI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g 182 (545)
T PLN02168 103 PILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNG 182 (545)
T ss_pred CCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhhhcC
Confidence 99999999999999778999999999999999999999999998776667767799999999999998766555545555
Q ss_pred CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeE
Q 007633 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267 (595)
Q Consensus 188 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 267 (595)
...+.+|.+||||++.. .+.++|++||+|||||||++..+.+.|+|+||+|+||++||.+++|..+++
T Consensus 183 ~~~~~~d~~liNG~~~~------------~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~ 250 (545)
T PLN02168 183 HSLPNPDGILFNGRGPE------------ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSS 250 (545)
T ss_pred CCCCCCCEEEEeccCCC------------cceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeE
Confidence 44567899999999852 278999999999999999999999999999999999999999999999999
Q ss_pred EEEeccceEEEEEEeCCCC-C--cceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 268 MDIHVGQSFSFLVTTDQNA-S--SDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 268 l~i~pGqR~dvlv~~~~~~-g--~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
+.|++||||||+|++++++ | ++|||++...+... ...+.|||+|.++....+.|+|..+...+..++.++...
T Consensus 251 l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~----~~~~~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~ 326 (545)
T PLN02168 251 LDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDA----YLGGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALS 326 (545)
T ss_pred EEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCC----CcceEEEEEECCCCCCCCCCCCCCCcccccccccchhhh
Confidence 9999999999999998655 3 38999998754432 267789999987643222344443322222223233333
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccC-CCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLD-FPYKL 423 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~-~~~~p 423 (595)
++.++.+....+.|.++++++..++++++.+..+. ...+|..+|+|||++|..|++|++.+.+++..+.+... +++.|
T Consensus 327 ~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p 405 (545)
T PLN02168 327 IRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDV-MLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYP 405 (545)
T ss_pred hhhcCCCCCCCCCCcccccccccccceeEEecccc-cccCceEEEEECCCccCCCCCchhhhhhcccccccccCCCccCC
Confidence 33445544455566655555555566666654321 12356789999999999999999887766554444332 34444
Q ss_pred CCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEE
Q 007633 424 MSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503 (595)
Q Consensus 424 ~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~i 503 (595)
.+.....+++++.+++|++|||+|+|.....||||||||+||||++|.|.|++.....||+.||++|||+.|+++||++|
T Consensus 406 ~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vI 485 (545)
T PLN02168 406 SNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAI 485 (545)
T ss_pred CcCccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCceEEEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEE
Confidence 33223345788899999999999999988899999999999999999999998776789999999999999999999999
Q ss_pred EEEecCcceeEEeeccccceeccceEEEEEec-----CCCC--CCCCCCCCccccccCc
Q 007633 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVIN-----PEID--KSAPLLPDNAIYCGLL 555 (595)
Q Consensus 504 rf~adNPG~W~~HCHil~H~~~GM~~~~~V~~-----~~~~--~~~~~~p~~~~~c~~~ 555 (595)
||++||||+|+|||||..|||.||+++++|.+ |+.. .++.++|++.+.||+.
T Consensus 486 RF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~P~~~~~cg~~ 544 (545)
T PLN02168 486 LIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGKV 544 (545)
T ss_pred EEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccCCChhhcccccC
Confidence 99999999999999999999999999999953 3333 4466789999999843
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=841.49 Aligned_cols=509 Identities=28% Similarity=0.488 Sum_probs=391.9
Q ss_pred CeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCc
Q 007633 30 PYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCP 108 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~ 108 (595)
.+|+|+|+|+++++++||+++++|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++|+||+++ ||||
T Consensus 2 ~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~p 81 (539)
T TIGR03389 2 EVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQCP 81 (539)
T ss_pred ceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccCC
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHH-HHHHhCC
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKL-RKDVENG 187 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l-~~~~~~g 187 (595)
|+||++|+|+|++++|+||||||||...|+ +||+|+|||++++..+.|+...|+|++|+|+||+++....+ ......+
T Consensus 82 I~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (539)
T TIGR03389 82 IQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160 (539)
T ss_pred cCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence 999999999999977999999999998766 59999999999876666666779999999999999866554 3334445
Q ss_pred CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeE
Q 007633 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267 (595)
Q Consensus 188 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 267 (595)
....++|.++|||+.....+|+ ....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++
T Consensus 161 ~~~~~~d~~liNG~~~~~~~~~----~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~ 236 (539)
T TIGR03389 161 GAPNVSDAYTINGHPGPLYNCS----SKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKT 236 (539)
T ss_pred CCCCccceEEECCCcCCCCCCC----CCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCe
Confidence 5556789999999975322222 123478999999999999999999999999999999999999999999999999
Q ss_pred EEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccc
Q 007633 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRW 347 (595)
Q Consensus 268 l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~ 347 (595)
+.|++||||||+|++++.+| +||||+.....+..........|||+|.++.....+..+..+...+...+......+..
T Consensus 237 l~i~~GqRydVlv~a~~~~g-~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~ 315 (539)
T TIGR03389 237 IVIGPGQTTNVLLTADQSPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRS 315 (539)
T ss_pred EEecCCCEEEEEEECCCCCc-eEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhccc
Confidence 99999999999999998888 99999976533221123356889999987543111111111110010000000000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEeccccc---------cc-CCeEEEEecCeecCCCCCcHhhhhhcCCCCcccc
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAE---------LI-EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKL 417 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~---------~~-~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~ 417 (595)
...+..+...| ..+++++.+...... .. ....+|.|||++|..|..|++.+.+.+..+.+..
T Consensus 316 ~~~~~~~~~~p--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~ 387 (539)
T TIGR03389 316 LNSAQYPANVP--------VTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTT 387 (539)
T ss_pred ccccCCCCCCC--------CCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCcccc
Confidence 00000011111 122333332221100 11 2247899999999988999886665544554443
Q ss_pred CCCCCCC-----CC-------CCccceeEEecCCCcEEEEEEEcCC---CccceeeecCceEEEEEEeCCccCCCC-CCC
Q 007633 418 DFPYKLM-----SR-------APKVDTSLINGTYKGFMEIIFQNND---TTVQSYHMDGYAFFVVGMDFGVWTENS-RGT 481 (595)
Q Consensus 418 ~~~~~p~-----~~-------~~~~~~~v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~ 481 (595)
++++.+. ++ ....+.+++.+++|++|||+|+|.+ ...||||||||+||||++|.|.|+... ...
T Consensus 388 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~ 467 (539)
T TIGR03389 388 DFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAK 467 (539)
T ss_pred CCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccc
Confidence 3222211 00 1223667899999999999999975 347999999999999999999998643 236
Q ss_pred CCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCC-CCCCCCCCccccc
Q 007633 482 YNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEID-KSAPLLPDNAIYC 552 (595)
Q Consensus 482 ~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~-~~~~~~p~~~~~c 552 (595)
+|+.||++|||+.|+++||++|||++||||.|+|||||++|+..||++.|.+...+.. .++.++|++++.|
T Consensus 468 ~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 468 FNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred cccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 8999999999999999999999999999999999999999999999999988765443 5688899999998
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=840.19 Aligned_cols=526 Identities=28% Similarity=0.501 Sum_probs=396.1
Q ss_pred hHHHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeC
Q 007633 11 CVSFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWN 89 (595)
Q Consensus 11 ~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~H 89 (595)
++|.+.-...++...+ .+++++|+|++++..++|||+++++++|||++|||+|++++||+|+|+|+|+|+ ++++||||
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwH 82 (574)
T PLN02191 4 IVWWIVTVVAVLTHTA-SAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWH 82 (574)
T ss_pred eehhHHHHHHHHHHhh-ccceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECC
Confidence 3444444333332222 346899999999999999999999999999999999999999999999999998 78999999
Q ss_pred CccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEe
Q 007633 90 GVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIF 168 (595)
Q Consensus 90 G~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 168 (595)
|++|++++|+||+++ |||||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||+++.....++ .+|+|++|+
T Consensus 83 Gl~~~~~~~~DGv~gvtq~pI~PG~s~~Y~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~ 160 (574)
T PLN02191 83 GIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERL-RYDGEFNLL 160 (574)
T ss_pred CCCCCCCccccCCCccccCCcCCCCeEEEEEEC-CCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCC-CCCeeEEEe
Confidence 999999999999998 99999999999999999 589999999999999999999999999765433333 459999999
Q ss_pred eeccccccHHHHHHHHhC--CCCCCCCCeEEEcCCCCCCCCCCCC--------------CCCCCceeEEEecCcEEEEEE
Q 007633 169 ISDWYTKSHKKLRKDVEN--GVDLGVPDGILINGLGPYRYDAAIV--------------PDGIPYQLINVEPGKTYRLRV 232 (595)
Q Consensus 169 l~d~~~~~~~~l~~~~~~--g~~~~~~d~~liNG~~~~~~~~~~~--------------~~~~~~~~l~v~~G~~~rlRl 232 (595)
++||++.........+.. .....++|.+||||++.+.|..+.. ...+....++|++||+|||||
T Consensus 161 l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRi 240 (574)
T PLN02191 161 LSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRL 240 (574)
T ss_pred eeccccCChHHHHHhhccCCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEE
Confidence 999999854332222211 1223568999999999988853210 112334479999999999999
Q ss_pred EEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEE
Q 007633 233 HNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAI 312 (595)
Q Consensus 233 iNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ai 312 (595)
||+|..+.+.|+|+||+|+|||+||.+++|+.++++.|++||||||+|+++++++++||||+....... ......||
T Consensus 241 INa~~~~~~~~~idgH~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~---~~~~~~ai 317 (574)
T PLN02191 241 ASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKP---NTTQALTI 317 (574)
T ss_pred EecCCceeEEEEECCCeEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCC---CCCCceEE
Confidence 999999999999999999999999999999999999999999999999999877558999997653221 12345699
Q ss_pred EEecCCCCCC--CCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEE
Q 007633 313 LHYSNSLGPA--SGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTT 390 (595)
Q Consensus 313 l~y~~~~~~~--~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~ 390 (595)
|+|.+..... +.+.|..+.+.+.... .....++......+.+. ....++++.+.... ..++..+|.
T Consensus 318 l~Y~~~~~~~~p~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~p------~~~~~~~~~~~~~~--~~~~~~~~~ 385 (574)
T PLN02191 318 LNYVTAPASKLPSSPPPVTPRWDDFERS----KNFSKKIFSAMGSPSPP------KKYRKRLILLNTQN--LIDGYTKWA 385 (574)
T ss_pred EEECCCCCCCCCCCCCCCCCcccccchh----hcccccccccccCCCCC------CcccceEEEecccc--eeCCeEEEE
Confidence 9997654321 1111111111111100 11111111100011111 01123444443211 234567899
Q ss_pred ecCeecCCCCCcHhhhhhcCCCCccccCCCCCC--CC---------CCCccceeEEecCCCcEEEEEEEcCC------Cc
Q 007633 391 LNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKL--MS---------RAPKVDTSLINGTYKGFMEIIFQNND------TT 453 (595)
Q Consensus 391 iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p--~~---------~~~~~~~~v~~~~~g~~ve~vi~N~~------~~ 453 (595)
+||++|..|.+|++.+.+.+.++.|..+.+... .+ ...+.+.+++.+++|++|||+|+|.+ ..
T Consensus 386 ~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~ 465 (574)
T PLN02191 386 INNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSE 465 (574)
T ss_pred ECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECCCcccCCCCC
Confidence 999999989999888766555555543222111 00 01234667889999999999999985 56
Q ss_pred cceeeecCceEEEEEEeCCccCCCC-CCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEE
Q 007633 454 VQSYHMDGYAFFVVGMDFGVWTENS-RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVN 532 (595)
Q Consensus 454 ~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~ 532 (595)
.||||||||+||||++|.|.|++.. ...||+.||++|||+.|+++||++|||++||||+|+|||||++|+..||++.|.
T Consensus 466 ~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~ 545 (574)
T PLN02191 466 IHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA 545 (574)
T ss_pred CCCEEeCCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEe
Confidence 7999999999999999999998632 246899999999999999999999999999999999999999999999999884
Q ss_pred EecCCCCCCCCCCCCccccccCccCC
Q 007633 533 VINPEIDKSAPLLPDNAIYCGLLSSL 558 (595)
Q Consensus 533 V~~~~~~~~~~~~p~~~~~c~~~~~~ 558 (595)
..++. ..++|++.+.|+.++..
T Consensus 546 -e~~~~---~~~~p~~~~~C~~~~~~ 567 (574)
T PLN02191 546 -EGLNR---IGKIPDEALGCGLTKQF 567 (574)
T ss_pred -cChhh---ccCCCcchhhhhccccc
Confidence 33332 34478889999977554
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-99 Score=832.10 Aligned_cols=524 Identities=30% Similarity=0.503 Sum_probs=403.9
Q ss_pred HHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECC-CCCceeeeCCc
Q 007633 13 SFFFILLWLLNGCFGGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGV 91 (595)
Q Consensus 13 ~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~ 91 (595)
++++.++.+++.+.+++.+++|+|+++++.++|||+.+++|+|||++|||+|++++||+|+|+|+|++ +++++|||||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~ 85 (566)
T PLN02604 6 ALFFLLFSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGI 85 (566)
T ss_pred hHHHHHHHHHHhhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCCC
Confidence 44555555567777788899999999999999999999999999999999999999999999999998 58999999999
Q ss_pred cCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeee
Q 007633 92 QHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFIS 170 (595)
Q Consensus 92 ~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~ 170 (595)
++.+++|+||+++ +||+|+||++++|+|++ +++||||||||.+.|+.+||+|+|||++++..+.|+ .+|+|.+++|+
T Consensus 86 ~~~~~~~~DG~~~~tq~~i~pg~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~d~~l~l~ 163 (566)
T PLN02604 86 RQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPF-SYDYDRSIILT 163 (566)
T ss_pred CCCCCccccCCCccccCccCCCCeEEEEEEc-CCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCcc-ccCcceEEEee
Confidence 9999999999998 99999999999999999 699999999999999999999999999987655565 45889999999
Q ss_pred ccccccHHHHHHHHhCC--CCCCCCCeEEEcCCCCCCCCCCC-----------CCCCCCceeEEEecCcEEEEEEEEeCC
Q 007633 171 DWYTKSHKKLRKDVENG--VDLGVPDGILINGLGPYRYDAAI-----------VPDGIPYQLINVEPGKTYRLRVHNVGI 237 (595)
Q Consensus 171 d~~~~~~~~l~~~~~~g--~~~~~~d~~liNG~~~~~~~~~~-----------~~~~~~~~~l~v~~G~~~rlRliNag~ 237 (595)
||+++...++....... ....++|..+|||++.++|.... ....+..+.++|++|++|||||||+|.
T Consensus 164 Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~ 243 (566)
T PLN02604 164 DWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTA 243 (566)
T ss_pred ccccCCHHHHHHhhccCCCccCCCCCceEEcCCCCCCCccccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccc
Confidence 99998765443322211 12246899999999998885321 011234568999999999999999999
Q ss_pred CceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecC
Q 007633 238 STSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSN 317 (595)
Q Consensus 238 ~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~ 317 (595)
.+.+.|+|+||+|+|||+||.+++|.+++.+.|++||||||+|+++++++++||||+....... ....+.|||+|.+
T Consensus 244 ~~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~---~~~~~~aIL~Y~~ 320 (566)
T PLN02604 244 LSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNN---TTPPGLAIFNYYP 320 (566)
T ss_pred cceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCC---CCcceeEEEEECC
Confidence 9999999999999999999999999999999999999999999999877658999986543221 2266789999986
Q ss_pred CCCCCCCC-C-CCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCee
Q 007633 318 SLGPASGP-L-PDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGIS 395 (595)
Q Consensus 318 ~~~~~~~~-l-p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s 395 (595)
.......+ . +..+.+.+.....++...++.... . .. . .....++++.+..+.. ..++..+|+||+++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~-------~~~~~d~~~~~~~~~~-~~~~~~~w~in~~~ 389 (566)
T PLN02604 321 NHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHG-Y-IH-P-------PPLTSDRVIVLLNTQN-EVNGYRRWSVNNVS 389 (566)
T ss_pred CCCCCCCCCCCCCCCcccccchhhcchhccccccc-C-cC-C-------CCCCCCeEEEEecccc-ccCCeEEEEECccc
Confidence 43211111 0 111111011111111111111000 0 00 0 1123455555533221 23456799999999
Q ss_pred cCCCCCcHhhhhhcCCCCccccCCC-CC-----------CCCCCCccceeEEecCCCcEEEEEEEcCC------Ccccee
Q 007633 396 YLPPSTPLMLAQQFNIPGAYKLDFP-YK-----------LMSRAPKVDTSLINGTYKGFMEIIFQNND------TTVQSY 457 (595)
Q Consensus 396 f~~~~~P~~~~~~~~~~~~~~~~~~-~~-----------p~~~~~~~~~~v~~~~~g~~ve~vi~N~~------~~~HP~ 457 (595)
|..++.|++.+.+...++.|+.+.+ +. ..+.....+.+++.++.|++||++|+|.. ...|||
T Consensus 390 ~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~ 469 (566)
T PLN02604 390 FNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPW 469 (566)
T ss_pred CCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCCCCCCCCE
Confidence 9988899887765545566653211 10 01112334567889999999999999975 356999
Q ss_pred eecCceEEEEEEeCCccCCCC-CCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecC
Q 007633 458 HMDGYAFFVVGMDFGVWTENS-RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 458 HlHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
|||||+||||++|.|.|++.. ...||+.||++|||+.|+++||++|||++||||.|+|||||++|+..||++.|... +
T Consensus 470 HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~-~ 548 (566)
T PLN02604 470 HLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEG-I 548 (566)
T ss_pred EecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEEEEeeC-h
Confidence 999999999999999998653 34699999999999999999999999999999999999999999999999988643 3
Q ss_pred CCCCCCCCCCCccccccCcc
Q 007633 537 EIDKSAPLLPDNAIYCGLLS 556 (595)
Q Consensus 537 ~~~~~~~~~p~~~~~c~~~~ 556 (595)
+ ...++|.+.+.|+..+
T Consensus 549 ~---~~~~~p~~~~~C~~~~ 565 (566)
T PLN02604 549 E---RVGKLPSSIMGCGESK 565 (566)
T ss_pred h---hccCCCCCcCccccCC
Confidence 2 3557788999998553
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-98 Score=817.90 Aligned_cols=502 Identities=30% Similarity=0.540 Sum_probs=387.1
Q ss_pred eEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CCCc
Q 007633 31 YVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TNCP 108 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq~~ 108 (595)
+|+|+|+++++.++|||+.+.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++||||+++ +||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 478999999999999999999999999999999999999999999999995 89999999999999999999998 9999
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhC--
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN-- 186 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~-- 186 (595)
|+||++|+|+|++ +|+||||||||.+.|+++||+|+|||+++...+.|+ .+|+|++|+|+||+++...+.......
T Consensus 81 I~PG~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 158 (541)
T TIGR03388 81 INPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKP 158 (541)
T ss_pred cCCCCEEEEEEEc-CCCEEEEEEecchHHhhccceEEEEEecCCCCCCCc-cccceEEEEeecccCCCHHHHHhhcccCC
Confidence 9999999999999 689999999999999999999999999986544555 458999999999999866443222221
Q ss_pred CCCCCCCCeEEEcCCCCCCCCCCCC-------------CCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE
Q 007633 187 GVDLGVPDGILINGLGPYRYDAAIV-------------PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253 (595)
Q Consensus 187 g~~~~~~d~~liNG~~~~~~~~~~~-------------~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi 253 (595)
.....++|.++|||++.++|..... ...+....++|++|++|||||||++..+.+.|+|+||+|+||
T Consensus 159 ~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VI 238 (541)
T TIGR03388 159 MRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVV 238 (541)
T ss_pred CcCCCCCcceEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEE
Confidence 1122568999999999888753311 112334569999999999999999999999999999999999
Q ss_pred eecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCC--CCCCCCCC
Q 007633 254 ETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPAS--GPLPDPPN 331 (595)
Q Consensus 254 a~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~--~~lp~~p~ 331 (595)
|+||.+++|..++++.|++||||||+|++++.++++||||+...... .......|||+|.++..... .+.|..+.
T Consensus 239 a~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~---~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~ 315 (541)
T TIGR03388 239 EADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRK---PNTPPGLTVLNYYPNSPSRLPPTPPPVTPA 315 (541)
T ss_pred EeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCC---CCCccEEEEEEECCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987655899999764331 12356789999987543211 11111221
Q ss_pred CCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCC
Q 007633 332 AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI 411 (595)
Q Consensus 332 ~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~ 411 (595)
+.+..... .....+......+.|. ...++++.+..... ..++..+|++||++|..|..|++.+.+++.
T Consensus 316 ~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~ 383 (541)
T TIGR03388 316 WDDFDRSK----AFSLAIKAAMGSPKPP-------ETSDRRIVLLNTQN-KINGYTKWAINNVSLTLPHTPYLGSLKYNL 383 (541)
T ss_pred ccccchhh----ccchhhhccccCCCCC-------CCCCcEEEEeccCc-ccCceEEEEECcccCCCCCccHHHHHhhcC
Confidence 11111000 0000000000011111 12345544433211 234567899999999888899887766544
Q ss_pred CCccccCCC-----------CCCCCCCCccceeEEecCCCcEEEEEEEcCC------CccceeeecCceEEEEEEeCCcc
Q 007633 412 PGAYKLDFP-----------YKLMSRAPKVDTSLINGTYKGFMEIIFQNND------TTVQSYHMDGYAFFVVGMDFGVW 474 (595)
Q Consensus 412 ~~~~~~~~~-----------~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~------~~~HP~HlHG~~F~Vl~~g~G~~ 474 (595)
.+.|....+ ..+.+...+.++.++.++.|++||++|+|.. ...||||||||+||||++|.|.|
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~ 463 (541)
T TIGR03388 384 LNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKF 463 (541)
T ss_pred CccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCC
Confidence 444432111 0111123345678899999999999999974 45799999999999999999999
Q ss_pred CCC-CCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCcccccc
Q 007633 475 TEN-SRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553 (595)
Q Consensus 475 ~~~-~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~~~~c~ 553 (595)
++. ....+|+.||++|||+.|+++||++|||++||||.|+|||||++|+..||++.|... ++ ...++|++.+.||
T Consensus 464 ~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-~~---~~~~~P~~~~~C~ 539 (541)
T TIGR03388 464 RPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VE---KVGKLPKEALGCG 539 (541)
T ss_pred CcccCcccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEecc-cc---ccCCCCccccCCC
Confidence 754 234699999999999999999999999999999999999999999999999988643 33 3445789999997
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-95 Score=798.55 Aligned_cols=490 Identities=21% Similarity=0.379 Sum_probs=372.6
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CCCcc
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TNCPI 109 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq~~I 109 (595)
-.|+|+++++.+++||+.+++++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|+.++|+||+++ |||||
T Consensus 9 ~~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI 88 (538)
T TIGR03390 9 PDHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPI 88 (538)
T ss_pred ccEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCC
Confidence 46999999999999999999999999999999999999999999999997 89999999999999999999999 99999
Q ss_pred CCCCeEEEEEEEC-CceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhCC-
Q 007633 110 PAGWNWTYQFQVK-DQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG- 187 (595)
Q Consensus 110 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g- 187 (595)
+||++|+|+|+++ +|+||||||||.+.|+. ||+|+|||++++.. ++ .+|+|++|+|+||+++...++...+..+
T Consensus 89 ~PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~~--~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 164 (538)
T TIGR03390 89 PPGHFFDYEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEPP--PY-KYDDERILLVSDFFSATDEEIEQGLLSTP 164 (538)
T ss_pred CCCCcEEEEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCcc--CC-CccCcEEEEEeCCCCCCHHHHHhhhhccC
Confidence 9999999999985 58999999999999987 59999999987543 33 3489999999999999776654433222
Q ss_pred -CCCCCCCeEEEcCCCCCCCCCCCC--CCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCc-eeEEeecCcceeee
Q 007633 188 -VDLGVPDGILINGLGPYRYDAAIV--PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN-LLLVETEGSYTVQQ 263 (595)
Q Consensus 188 -~~~~~~d~~liNG~~~~~~~~~~~--~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~-~~via~DG~~~~p~ 263 (595)
....++|.++|||++.+.|..... ...|..+.++|++||+|||||||+|..+.+.|+|+||+ |+|||+||.+++|.
T Consensus 165 ~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~ 244 (538)
T TIGR03390 165 FTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPA 244 (538)
T ss_pred CccCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCce
Confidence 123567999999998665422211 12345689999999999999999999999999999999 99999999999999
Q ss_pred eeeEEEEeccceEEEEEEeCCC-------CCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcc
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQN-------ASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTY 336 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~-------~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~ 336 (595)
.++++.|++||||||+|+++++ ++ +||||+.....++ ...+.|||+|.++.....+..|..+.. ...
T Consensus 245 ~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~-~Y~ir~~~~~~~~----~~~~~aiL~Y~~~~~~~~~~~p~~~~~-~~~ 318 (538)
T TIGR03390 245 KIDHLQLGGGQRYSVLFKAKTEDELCGGDKR-QYFIQFETRDRPK----VYRGYAVLRYRSDKASKLPSVPETPPL-PLP 318 (538)
T ss_pred EeCeEEEccCCEEEEEEECCCccccccCCCC-cEEEEEeecCCCC----cceEEEEEEeCCCCCCCCCCCCCCCCC-Ccc
Confidence 9999999999999999999975 35 9999997654322 256789999976532211111211100 000
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccc-cCCeEEEEecCeecCC--CCCcHhhhhhcCCCC
Q 007633 337 FSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL-IEGKWRTTLNGISYLP--PSTPLMLAQQFNIPG 413 (595)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~-~~g~~~~~iNg~sf~~--~~~P~~~~~~~~~~~ 413 (595)
.....+.+ .++.+......+. +. ....+++++.+....... .++..+|++||++|.. +++|++...+.+.
T Consensus 319 ~~~~~~~~--~~l~pl~~~~~~~--~~-~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~-- 391 (538)
T TIGR03390 319 NSTYDWLE--YELEPLSEENNQD--FP-TLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENG-- 391 (538)
T ss_pred Ccchhhhh--eeeEecCccccCC--CC-CCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCC--
Confidence 00000000 0111111000000 00 012456777766543211 2467899999999985 7889886654221
Q ss_pred cccc-CCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC--------CccceeeecCceEEEEEEeCCccCCCC-CCCCC
Q 007633 414 AYKL-DFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND--------TTVQSYHMDGYAFFVVGMDFGVWTENS-RGTYN 483 (595)
Q Consensus 414 ~~~~-~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~--------~~~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~~n 483 (595)
.... .+...+.......+++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|++.. ...+|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~n 471 (538)
T TIGR03390 392 LPATPNYTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLE 471 (538)
T ss_pred CCcCCCcccccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccChhhhc
Confidence 0000 0000000001223566788999999999999974 467999999999999999999998643 23588
Q ss_pred CCCCCcccEEEeC----------CCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 484 KWDGVARSTTQVF----------PGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 484 ~~~p~~rDTv~v~----------p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+.||++|||+.|+ +++|++|||++||||+|+|||||.+|+.+||+++|.|.+.++
T Consensus 472 l~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~ 536 (538)
T TIGR03390 472 NYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAED 536 (538)
T ss_pred cCCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCChHH
Confidence 9999999999996 899999999999999999999999999999999999877653
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-77 Score=655.25 Aligned_cols=429 Identities=22% Similarity=0.303 Sum_probs=321.4
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccC
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIP 110 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~ 110 (595)
+.|+|++++.+++++|+.+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+|+ +||+|+
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I~ 123 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLP--FQMDGVPGVSFAGIA 123 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCC--ccccCCCcccccccC
Confidence 789999999999999999999999999999999999999999999999999999999999874 67999998 999999
Q ss_pred CCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHh-----
Q 007633 111 AGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVE----- 185 (595)
Q Consensus 111 PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~----- 185 (595)
||++|+|+|++ .++||||||||.+.|+++||+|+|||++++..+. .+|+|++|+|+||++.+...+...+.
T Consensus 124 PG~s~~Y~f~~-~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~p~---~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~ 199 (587)
T TIGR01480 124 PGETFTYRFPV-RQSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPV---RADREHVVLLSDWTDLDPAALFRKLKVMAGH 199 (587)
T ss_pred CCCeEEEEEEC-CCCeeEEEecCchhHhhccceEEEEECCCccccC---CCCceEEEEeeecccCCHHHHHHhhhccccc
Confidence 99999999999 5899999999999999999999999998755333 34899999999999875444321111
Q ss_pred -----------------CCCC------------------C----CCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCc
Q 007633 186 -----------------NGVD------------------L----GVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGK 226 (595)
Q Consensus 186 -----------------~g~~------------------~----~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~ 226 (595)
.|.. . +....+||||+.. ...+++.+++|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~-----------~~~~~~~v~~G~ 268 (587)
T TIGR01480 200 DNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTP-----------AGNWTGLFRPGE 268 (587)
T ss_pred ccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccC-----------CCCceEEECCCC
Confidence 0100 0 0112478999875 223679999999
Q ss_pred EEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCC
Q 007633 227 TYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNK 306 (595)
Q Consensus 227 ~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~ 306 (595)
+|||||||+|+.+.+.|+|+||+|+||++||.+++|..++++.|++||||||+|+.+ ..| .|+|++......
T Consensus 269 rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~-~~g-~~~i~a~~~~~~------ 340 (587)
T TIGR01480 269 KVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPT-GDD-AFTIFAQDSDRT------ 340 (587)
T ss_pred EEEEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecC-CCc-eEEEEEEecCCC------
Confidence 999999999999999999999999999999999999999999999999999999987 346 899999765321
Q ss_pred cceEEEEEecCCCCCCCCCCCCCCCCCCcccccc-----ccc---------ccc---------------cccccCC----
Q 007633 307 VTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMN-----QAR---------SIR---------------WNVSAGA---- 353 (595)
Q Consensus 307 ~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~-----~~~---------~~~---------------~~l~~~~---- 353 (595)
....++|++........++++..+...-.+.... ... ... .+.....
T Consensus 341 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (587)
T TIGR01480 341 GYARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPA 420 (587)
T ss_pred ceEEEEEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcc
Confidence 4567788876542111111211110000000000 000 000 0000000
Q ss_pred ----------CCCCCCCC---C----------------------CcCccceeEEEEEecccccccCCeEEEEecCeecCC
Q 007633 354 ----------ARPNPQGS---F----------------------KYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLP 398 (595)
Q Consensus 354 ----------~~p~p~~~---~----------------------~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~ 398 (595)
..+.|... . .+.....+|++.+..+ ....+..|+|||..|.+
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~---g~m~~~~wtiNG~~~~~ 497 (587)
T TIGR01480 421 SEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLT---GNMERFAWSFDGEAFGL 497 (587)
T ss_pred cccCCccccccccCcccccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEc---CCCceeEEEECCccCCC
Confidence 00000000 0 0001234555555432 12235679999987631
Q ss_pred CCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCC
Q 007633 399 PSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENS 478 (595)
Q Consensus 399 ~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~ 478 (595)
. ..+.++.|+.|+|.|.|...+.||||+||+.|+++..+ |.+
T Consensus 498 -~--------------------------------~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~-G~~---- 539 (587)
T TIGR01480 498 -K--------------------------------TPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQ-GEF---- 539 (587)
T ss_pred -C--------------------------------CceEecCCCEEEEEEECCCCCCcceeEcCceeeeecCC-Ccc----
Confidence 1 12358899999999999999999999999999988653 321
Q ss_pred CCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 479 RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 479 ~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+.++||+.|+|++.+.++|.+||||.|+||||++.|++.|||..++|.
T Consensus 540 --------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 540 --------QVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred --------cccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 356899999999999999999999999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-74 Score=627.66 Aligned_cols=442 Identities=18% Similarity=0.194 Sum_probs=302.6
Q ss_pred eEEEEEEEEEEEecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCcc
Q 007633 31 YVFYDWTISYVTASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPI 109 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I 109 (595)
...|+|++++...+++|.. .++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +.+||+| ||+|
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~--~~~DG~p--q~~I 120 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVP--GEVDGGP--QGII 120 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCC--CccCCCC--CCCC
Confidence 3469999999999998544 579999999999999999999999999999999999999999986 4599987 8999
Q ss_pred CCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHHH
Q 007633 110 PAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRKD 183 (595)
Q Consensus 110 ~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~~ 183 (595)
+||++|+|+|++++++||||||||. +.|+++||+|+|||+++++.+.+++ ...+|++++|+||+++.+..+...
T Consensus 121 ~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~ 200 (523)
T PRK10965 121 APGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQ 200 (523)
T ss_pred CCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceecc
Confidence 9999999999996568999999995 7999999999999999865433332 245699999999999765544322
Q ss_pred HhCC--CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcce
Q 007633 184 VENG--VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSYT 260 (595)
Q Consensus 184 ~~~g--~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~~ 260 (595)
.+.. .....+|.++|||+.. |.+.++ +++|||||||+|..+.+.|++ +||+|+|||+||+++
T Consensus 201 ~~~~~~~~g~~gd~~lVNG~~~--------------p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l 265 (523)
T PRK10965 201 LDVMTAAVGWFGDTLLTNGAIY--------------PQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLL 265 (523)
T ss_pred ccccccccCccCCeEEECCccc--------------ceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcc
Confidence 2211 1224678999999987 777775 579999999999999999998 899999999999987
Q ss_pred -eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCC-CCCCCcceEEEEEecCCCCCCCCCCCCCCCCC-Cccc
Q 007633 261 -VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNS-SEWNKVTGVAILHYSNSLGPASGPLPDPPNAY-DTYF 337 (595)
Q Consensus 261 -~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~-~~~~ 337 (595)
+|..++++.|+|||||||+|++++ .+ .|++.+....... ..........++++.........++|...... ....
T Consensus 266 ~~P~~v~~l~lapGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~ 343 (523)
T PRK10965 266 AEPVKVSELPILMGERFEVLVDTSD-GK-AFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPS 343 (523)
T ss_pred cCccEeCeEEECccceEEEEEEcCC-Cc-eEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCc
Confidence 799999999999999999999984 45 8999875432110 00000113455555433211111222211000 0000
Q ss_pred -ccccccccccccccCCCC-----C-CCCCCCCcCccce---eEEE------EEecc---cccccCCeEEEEecCeecCC
Q 007633 338 -SMNQARSIRWNVSAGAAR-----P-NPQGSFKYGQITV---TDVY------VILNR---PAELIEGKWRTTLNGISYLP 398 (595)
Q Consensus 338 -~~~~~~~~~~~l~~~~~~-----p-~p~~~~~~~~~~~---~~~~------~l~~~---~~~~~~g~~~~~iNg~sf~~ 398 (595)
.....+.+...+...... . ...+.-..+.... ...+ .+... .....+....|+|||++|..
T Consensus 344 ~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~ 423 (523)
T PRK10965 344 LEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDM 423 (523)
T ss_pred ccccceeEEEEeeccccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccCCCeECCC
Confidence 000001110000000000 0 0000000000000 0000 00000 00000000125777777642
Q ss_pred CCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCC
Q 007633 399 PSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTEN 477 (595)
Q Consensus 399 ~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~ 477 (595)
. . ..+.++.|++++|.|.|.+. ..|||||||++||||+++...-
T Consensus 424 ~-~-------------------------------~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~--- 468 (523)
T PRK10965 424 N-K-------------------------------PMFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP--- 468 (523)
T ss_pred C-C-------------------------------cceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEecCCCC---
Confidence 1 1 12357899999999999875 6799999999999999964321
Q ss_pred CCCCCCCCCCCcccEEEeCCCcEEEEEEEec----CcceeEEeeccccceeccceEEEEEe
Q 007633 478 SRGTYNKWDGVARSTTQVFPGAWTAILVYLD----NAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 478 ~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad----NPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
...++.|||||.|++ +.+.|++++| ++|.||||||||+|||.|||..|+|.
T Consensus 469 -----~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~~~V~ 523 (523)
T PRK10965 469 -----AAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLGFTVS 523 (523)
T ss_pred -----CccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCccceeEeC
Confidence 122467999999988 6666666654 67799999999999999999999984
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=606.68 Aligned_cols=404 Identities=16% Similarity=0.181 Sum_probs=296.0
Q ss_pred EEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCC
Q 007633 33 FYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPA 111 (595)
Q Consensus 33 ~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~P 111 (595)
.++|+++....+++ |..+++|+|||++|||+|++++||+|+|+|+|+|++++++||||+++... .+||++ ++|+|
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~~---~~I~P 122 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGPA---RMMSP 122 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCcc---ccCCC
Confidence 37999999999888 56789999999999999999999999999999999999999999998754 577764 88999
Q ss_pred CCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHHHHh
Q 007633 112 GWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRKDVE 185 (595)
Q Consensus 112 G~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~~~~ 185 (595)
|++|+|+|++.+++||||||||. ..|+++||+|+|||+++.+.+.+++ ...+|++|+|+||+.+........ .
T Consensus 123 G~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~-~ 201 (471)
T PRK10883 123 NADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYN-E 201 (471)
T ss_pred CCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccc-c
Confidence 99999999997679999999995 4699999999999999765444433 234599999999998754432111 1
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcce-eee
Q 007633 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSYT-VQQ 263 (595)
Q Consensus 186 ~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~~-~p~ 263 (595)
.......+|.++|||+.. |.++|++| +|||||||+|..+.+.|+| +||+|+||++||.++ +|.
T Consensus 202 ~~~~g~~gd~~lvNG~~~--------------p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~ 266 (471)
T PRK10883 202 PGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPV 266 (471)
T ss_pred cccCCccCCeeEECCccC--------------CeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCc
Confidence 122235679999999987 78999875 8999999999999999999 899999999997766 799
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC----CCCC---cceEEEEEecCCCCCCCCCCCCCCCCCCcc
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS----EWNK---VTGVAILHYSNSLGPASGPLPDPPNAYDTY 336 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~----~~~~---~~~~ail~y~~~~~~~~~~lp~~p~~~~~~ 336 (595)
.++++.|+|||||||+|++++ .+ .+.+++........ .... .....+++....... ++.+.
T Consensus 267 ~~~~l~l~pGeR~dvlVd~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------- 334 (471)
T PRK10883 267 SVKQLSLAPGERREILVDMSN-GD-EVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLL--PLVTD-------- 334 (471)
T ss_pred EeCeEEECCCCeEEEEEECCC-Cc-eEEEECCCccccccccccccCCccccccceeEEEEccccc--cCCCC--------
Confidence 999999999999999999974 34 67776532110000 0000 001122333211100 00000
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccc
Q 007633 337 FSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYK 416 (595)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~ 416 (595)
.++..+.... +.+. ....++++.+. + ..|.|||++|.+...
T Consensus 335 -------~~p~~l~~~~--~~~~------~~~~~~~~~l~--------~-~~~~INg~~~~~~~~--------------- 375 (471)
T PRK10883 335 -------NLPMRLLPDE--IMEG------SPIRSREISLG--------D-DLPGINGALWDMNRI--------------- 375 (471)
T ss_pred -------cCChhhcCCC--CCCC------CCcceEEEEec--------C-CcCccCCcccCCCcc---------------
Confidence 0000000000 0000 01112344332 1 147899998843111
Q ss_pred cCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeC
Q 007633 417 LDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVF 496 (595)
Q Consensus 417 ~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~ 496 (595)
.+.++.|++++|.|.|. +.|||||||+.|||++++.... ...+..|||||.|+
T Consensus 376 -----------------~~~~~~g~~e~W~~~n~--~~HP~HlHg~~FqVl~~~G~~~--------~~~~~gwkDTV~v~ 428 (471)
T PRK10883 376 -----------------DVTAQQGTWERWTVRAD--MPQAFHIEGVMFLIRNVNGAMP--------FPEDRGWKDTVWVD 428 (471)
T ss_pred -----------------eeecCCCCEEEEEEECC--CCcCEeECCccEEEEEecCCCC--------CccccCcCcEEEcC
Confidence 12468999999999886 5799999999999999964311 11234789999996
Q ss_pred CCcEEEEEEEecCcc----eeEEeeccccceeccceEEEEEecC
Q 007633 497 PGAWTAILVYLDNAG----IWNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 497 p~g~~~irf~adNPG----~W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
+.+.|++++|++| .||||||||+|||.|||..|+|..|
T Consensus 429 --~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~~ 470 (471)
T PRK10883 429 --GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNPA 470 (471)
T ss_pred --CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEecC
Confidence 3599999999987 8999999999999999999999764
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-58 Score=494.11 Aligned_cols=401 Identities=20% Similarity=0.242 Sum_probs=290.5
Q ss_pred ecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEE
Q 007633 43 ASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 43 ~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~ 121 (595)
...++....+|+|||++|||+|++++||+|+|+++|+|.+++++||||+..+ +.+||++. +|+++.||++++|.|+.
T Consensus 45 ~~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p--~~~dG~~~~~~~~~~~~~~~~y~f~~ 122 (451)
T COG2132 45 AFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGETPTYTFTQ 122 (451)
T ss_pred eeecCCCceeEEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccC--ccccCCCcccccCCCCCCcEEEeecC
Confidence 3445677889999999999999999999999999999988899999998665 78999988 99999999999999999
Q ss_pred CCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCC
Q 007633 122 KDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGL 201 (595)
Q Consensus 122 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~ 201 (595)
+++||||||+|.+.|+++||+|++||++....+. ..|.+..++..+|+.......... .........+..+|||+
T Consensus 123 -~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~---~~d~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~vnG~ 197 (451)
T COG2132 123 -DVPGTYWYHPHTHGQVYDGLAGALIIEDENSEPL---GVDDEPVILQDDWLDEDGTDLYQE-GPAMGGFPGDTLLVNGA 197 (451)
T ss_pred -CCCcceEeccCCCchhhcccceeEEEeCCCCCCC---CCCceEEEEEeeeecCCCCccccC-CccccCCCCCeEEECCC
Confidence 4788999999999999999999999999866444 447788888888887644332221 11112344689999996
Q ss_pred CCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEE
Q 007633 202 GPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVT 281 (595)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~ 281 (595)
.. +.+.++. ++|||||+|++..+.+.+++.+++|+||++||.+++|..+|.+.++|||||||+++
T Consensus 198 ~~--------------p~~~~~~-g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 198 IL--------------PFKAVPG-GVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred cc--------------ceeecCC-CeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 65 5555555 56999999999888899999999999999999999998999999999999999999
Q ss_pred eCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCC----CCCCCCcccccccccccccccccCCCCCC
Q 007633 282 TDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPD----PPNAYDTYFSMNQARSIRWNVSAGAARPN 357 (595)
Q Consensus 282 ~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~----~p~~~~~~~~~~~~~~~~~~l~~~~~~p~ 357 (595)
+++ .+ .|.+.+...... ....+..... .....+.+... .+. .+. ... .....+.... ..
T Consensus 263 ~~~-~~-~~~l~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~d~---~~~--~~~~~~~~~~--~~ 325 (451)
T COG2132 263 MND-GG-AVTLTALGEDMP------DTLKGFRAPN-PILTPSYPVLNGRVGAPT-GDM---ADH--APVGLLVTIL--VE 325 (451)
T ss_pred cCC-CC-eEEEEeccccCC------ceeeeeeccc-cccccccccccccccCCC-cch---hhc--cccccchhhc--CC
Confidence 995 44 777777551111 1111121111 10000000000 000 000 000 0000000000 00
Q ss_pred CCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEec
Q 007633 358 PQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLING 437 (595)
Q Consensus 358 p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~ 437 (595)
+. ...+..+.+. ...+...|.+|+..|.+. ...+.+
T Consensus 326 ~~-------~~~~~~~~l~-----~~~~~~~~~~n~~~~~~~--------------------------------~~~~~~ 361 (451)
T COG2132 326 PG-------PNRDTDFHLI-----GGIGGYVWAINGKAFDDN--------------------------------RVTLIA 361 (451)
T ss_pred Cc-------ccccccchhh-----cccccccccccCccCCCC--------------------------------cCceee
Confidence 00 0001111111 111234577777766321 122467
Q ss_pred CCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEee
Q 007633 438 TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRA 517 (595)
Q Consensus 438 ~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HC 517 (595)
+.|++++|+|.|.+.+.||||+||+.|+|++.+. ......+.||||+.+.+++.++++|.+|+||.|+|||
T Consensus 362 ~~G~~~~~~i~n~~~~~HP~HlHg~~F~v~~~~~---------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HC 432 (451)
T COG2132 362 KAGTRERWVLTNDTPMPHPFHLHGHFFQVLSGDA---------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHC 432 (451)
T ss_pred cCCCEEEEEEECCCCCccCeEEcCceEEEEecCC---------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEec
Confidence 8999999999999999999999999999999971 1233457899999999999999999999999999999
Q ss_pred ccccceeccceEEEEEec
Q 007633 518 ENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 518 Hil~H~~~GM~~~~~V~~ 535 (595)
|+++|++.|||..+.|..
T Consensus 433 H~l~H~~~Gm~~~~~v~~ 450 (451)
T COG2132 433 HILEHEDNGMMGQFGVVP 450 (451)
T ss_pred cchhHhhcCCeeEEEecC
Confidence 999999999999998753
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-48 Score=399.01 Aligned_cols=265 Identities=19% Similarity=0.168 Sum_probs=219.2
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCC
Q 007633 26 FGGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 26 ~a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 102 (595)
++...+++|+|++++.+.+. +|..+.+|+|||++|||+|++++||+|+|+|+|+++ .++++||||. .++||+
T Consensus 22 ~~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~-----~~~dg~ 96 (311)
T TIGR02376 22 RSGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAA-----TGALGG 96 (311)
T ss_pred cCCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCC-----CccCCC
Confidence 45667899999999999884 699999999999999999999999999999999986 5899999997 258998
Q ss_pred CC-CCCccCCCCeEEEEEEECCceeeeEEccC----cchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccH
Q 007633 103 LG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPS----LDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSH 177 (595)
Q Consensus 103 ~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~ 177 (595)
+. +| |+||++++|+|++ +++|||||||| +..|+.+||+|+|||++++..+ ..|+|++++++||+++..
T Consensus 97 ~~~~~--I~PG~t~ty~F~~-~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~----~~d~e~~l~l~d~~~~~~ 169 (311)
T TIGR02376 97 AALTQ--VNPGETATLRFKA-TRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLP----EYDKEYYIGESDLYTPKD 169 (311)
T ss_pred Cccee--ECCCCeEEEEEEc-CCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCc----CcceeEEEeeeeEecccc
Confidence 76 65 9999999999999 58999999999 4689999999999999975422 458999999999998754
Q ss_pred HHHHHHHh-C-C-CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEe
Q 007633 178 KKLRKDVE-N-G-VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVE 254 (595)
Q Consensus 178 ~~l~~~~~-~-g-~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via 254 (595)
........ . + .....++.++|||+...++ +.+++++|+++||||+|++..+.+.|+++||.+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-----------~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~ 238 (311)
T TIGR02376 170 EGEGGAYEDDVAAMRTLTPTHVVFNGAVGALT-----------GDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVW 238 (311)
T ss_pred ccccccccchHHHHhcCCCCEEEECCccCCCC-----------CCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEE
Confidence 32110000 0 0 0124678999999965221 5679999999999999999988999999999999999
Q ss_pred ecCcceeeee--eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 255 TEGSYTVQQN--YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 255 ~DG~~~~p~~--~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
.||.++.+.. ++++.|+||||+||+|++++ +| .|+++++...... +....++|+|++..
T Consensus 239 ~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~-pG-~y~~~~~~~~~~~----~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 239 VTGKFANPPNRDVETWFIPGGSAAAALYTFEQ-PG-VYAYVDHNLIEAF----EKGAAAQVKVEGAW 299 (311)
T ss_pred ECCcccCCCCCCcceEEECCCceEEEEEEeCC-Ce-EEEEECcHHHHHH----hCCCEEEEEECCCC
Confidence 9999998644 89999999999999999995 78 9999987653321 13477999997643
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=268.17 Aligned_cols=116 Identities=38% Similarity=0.767 Sum_probs=109.0
Q ss_pred EEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeE
Q 007633 37 TISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 37 ~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|++.++.++|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++...+|+||+++ +||+|.||+++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~ 80 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESF 80 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecce
Confidence 47899999998889999999999999999999999999999999999999999999998899999998 99999999999
Q ss_pred EEEEEECCceeeeEEccCcchhhhcCceeeEEEeccC
Q 007633 116 TYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 152 (595)
+|+|++++++||||||||...|..+||+|+|||++++
T Consensus 81 ~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~~ 117 (117)
T PF07732_consen 81 TYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPPE 117 (117)
T ss_dssp EEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-TT
T ss_pred eeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCCC
Confidence 9999997669999999999888889999999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=228.32 Aligned_cols=109 Identities=28% Similarity=0.388 Sum_probs=100.1
Q ss_pred CCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 427 ~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
..+.+..++.++.|++++|+|+|.+...|||||||++|+|++++.+.++......+++.+|.+|||+.|+++++++|||+
T Consensus 28 ~~~~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~ 107 (138)
T PF07731_consen 28 PFFGNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFR 107 (138)
T ss_dssp TSSSTTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEE
T ss_pred ccCCCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEE
Confidence 45567889999999999999999999999999999999999999888766666678999999999999999999999999
Q ss_pred ecCcceeEEeeccccceeccceEEEEEec
Q 007633 507 LDNAGIWNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 507 adNPG~W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
+||||.|+||||+++|++.|||+.+.|.+
T Consensus 108 ~~~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 108 ADNPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp ETSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred eecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 99999999999999999999999999864
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=225.11 Aligned_cols=153 Identities=33% Similarity=0.528 Sum_probs=124.6
Q ss_pred CceeEeeeccccccHHHHHH-HHhCC----CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCC
Q 007633 163 GDITIFISDWYTKSHKKLRK-DVENG----VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGI 237 (595)
Q Consensus 163 ~e~~l~l~d~~~~~~~~l~~-~~~~g----~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~ 237 (595)
.|++|+++|||++....+.. .+..+ ...+++|+++|||++.++|.+... .....+.++|++|++|||||||+|+
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~-~~~~~~~~~v~~g~~~rlRliNa~~ 79 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSADY-TGGEPPVIKVKPGERYRLRLINAGA 79 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTGS-TTSTSGEEEEETTTEEEEEEEEESS
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccccc-cccccceEEEcCCcEEEEEEEeccC
Confidence 47899999999987765543 22222 226789999999999998875532 3345699999999999999999999
Q ss_pred CceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecC
Q 007633 238 STSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSN 317 (595)
Q Consensus 238 ~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~ 317 (595)
.+.+.|+|+||+|+|||+||.+++|..++++.|++||||||+|++++++| +|||++................|+|+|.+
T Consensus 80 ~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g-~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~ 158 (159)
T PF00394_consen 80 STSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPG-NYWIRASYQHDSINDPQNGNALAILRYDG 158 (159)
T ss_dssp S-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSS-EEEEEEEESSSSSHSHGGGTTEEEEEETT
T ss_pred CeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCC-eEEEEEecccCCCccCCCcEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999998677 99999973322222234578899999975
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-19 Score=160.05 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=82.7
Q ss_pred CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC---CCceeeeCCccCCCCCCCCCCCC-CCCccCCC---C-e--
Q 007633 45 PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD---EPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAG---W-N-- 114 (595)
Q Consensus 45 ~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~---~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG---~-~-- 114 (595)
..+....-+.++| .++|+|++++||+|+|+|+|.++ ..+.||+||...+..+.+||++. +||+|.|+ + .
T Consensus 36 ~~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~ 114 (148)
T TIGR03095 36 MPGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGY 114 (148)
T ss_pred CCCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccce
Confidence 3456667788888 57999999999999999999964 34667777776555556999997 99998884 1 1
Q ss_pred EEEEEEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 115 WTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 115 ~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
.++.|+++ ++||||||||...|+.+||+|+|||+
T Consensus 115 ~~~tf~f~-~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 115 TDFTYHFS-TAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred eEEEEECC-CCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 34556653 89999999999999999999999995
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.64 E-value=8e-16 Score=169.48 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=86.3
Q ss_pred eeEEEEEEcCCCCCC--eEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC---CCCCccCCCCeEEEEEEEC
Q 007633 48 DKQQVIGINGQFPGP--ILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL---GTNCPIPAGWNWTYQFQVK 122 (595)
Q Consensus 48 ~~~~~~~~Ng~~PgP--~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~ 122 (595)
..+.+|+|||+.+++ .|++++||+|+|++.|.+..++.|||||+.... ...||.. ..+..|+||++++|+|.+
T Consensus 483 m~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v-~~~~G~~~~~~dTv~V~Pg~t~~~~f~a- 560 (587)
T TIGR01480 483 MERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSEL-EDGQGEFQVRKHTVDVPPGGKRSFRVTA- 560 (587)
T ss_pred CceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCceeee-ecCCCcccccCCceeeCCCCEEEEEEEC-
Confidence 357789999999874 799999999999999999999999999997642 2235642 234889999999999999
Q ss_pred CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 123 DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 123 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
+++|+||||||...|...||++.+.|.
T Consensus 561 d~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 561 DALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 689999999999999999999999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.2e-13 Score=137.19 Aligned_cols=244 Identities=14% Similarity=0.051 Sum_probs=153.2
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEe
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~ 271 (595)
-+.+++||+.. .|.|++++|++++++|.|.... ..+.+++|++. +.||... ...|.
T Consensus 47 ~~~~~~nG~~p-------------GP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~ 103 (311)
T TIGR02376 47 YQAMTFDGSVP-------------GPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVN 103 (311)
T ss_pred EEEEEECCccc-------------CceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeEC
Confidence 35789999864 3899999999999999998642 47889998874 4576431 22389
Q ss_pred ccceEEEEEEeCCCCCcceEEEEeecc--cCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 272 VGQSFSFLVTTDQNASSDYYIVASPRF--VNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 272 pGqR~dvlv~~~~~~g~~y~i~a~~~~--~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|||++.+.++++ .+| .||.+++... ..+ ......+.|...... +.|.. +.+..+- .. .|.+
T Consensus 104 PG~t~ty~F~~~-~~G-ty~YH~H~~~~~~~q---~~~Gl~G~liV~~~~-----~~~~~----d~e~~l~-l~--d~~~ 166 (311)
T TIGR02376 104 PGETATLRFKAT-RPG-AFVYHCAPPGMVPWH---VVSGMNGAIMVLPRE-----GLPEY----DKEYYIG-ES--DLYT 166 (311)
T ss_pred CCCeEEEEEEcC-CCE-EEEEEcCCCCchhHH---hhcCcceEEEeeccC-----CCcCc----ceeEEEe-ee--eEec
Confidence 999999999987 578 9999998532 111 012233444444221 11110 1111100 00 1111
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCc
Q 007633 350 SAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429 (595)
Q Consensus 350 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~ 429 (595)
...... .+. ...+ ..... ... ...+++||+.... .|
T Consensus 167 ~~~~~~---~~~-----~~~~----~~~~~--~~~-~~~~~iNG~~~~~--~~--------------------------- 202 (311)
T TIGR02376 167 PKDEGE---GGA-----YEDD----VAAMR--TLT-PTHVVFNGAVGAL--TG--------------------------- 202 (311)
T ss_pred cccccc---ccc-----ccch----HHHHh--cCC-CCEEEECCccCCC--CC---------------------------
Confidence 100000 000 0000 00000 001 1246778875310 00
Q ss_pred cceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC-cccEEEeCCCcEEEEEEEe
Q 007633 430 VDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV-ARSTTQVFPGAWTAILVYL 507 (595)
Q Consensus 430 ~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~v~p~g~~~irf~a 507 (595)
.+.++.|+++.|.|.|.+. ..+.||++|++|.++..+++...+ +. ..|++.|.||....|.+++
T Consensus 203 ----~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~----------~~~~~~~~~i~PG~R~dv~v~~ 268 (311)
T TIGR02376 203 ----DNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANP----------PNRDVETWFIPGGSAAAALYTF 268 (311)
T ss_pred ----CcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCcccCC----------CCCCcceEEECCCceEEEEEEe
Confidence 1246789999999999876 569999999999999995432221 12 2689999999999999999
Q ss_pred cCcceeEEeeccccce-eccceEEEEEe
Q 007633 508 DNAGIWNLRAENLDTW-YLGQEVYVNVI 534 (595)
Q Consensus 508 dNPG~W~~HCHil~H~-~~GM~~~~~V~ 534 (595)
+.||.|.+|||...+. ..|+++.++|.
T Consensus 269 ~~pG~y~~~~~~~~~~~~~g~~~~i~~~ 296 (311)
T TIGR02376 269 EQPGVYAYVDHNLIEAFEKGAAAQVKVE 296 (311)
T ss_pred CCCeEEEEECcHHHHHHhCCCEEEEEEC
Confidence 9999999999988776 67999888874
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.2e-13 Score=116.06 Aligned_cols=100 Identities=23% Similarity=0.133 Sum_probs=80.1
Q ss_pred HhhccccCCCeEEEEEEEE--EEEe---cCCCeeEEEE-EEcCCCCCCeEEeecCCEEEEEEEECCCCCc--eeeeCCcc
Q 007633 21 LLNGCFGGDPYVFYDWTIS--YVTA---SPLGDKQQVI-GINGQFPGPILNVTTNWNVVVNVKNDLDEPL--LLTWNGVQ 92 (595)
Q Consensus 21 ~~~~~~a~~~~~~~~l~~~--~~~~---~~~G~~~~~~-~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~--~iH~HG~~ 92 (595)
++....|.++.++|++++. +.++ ...|+....| ++|+++..+.|+|++||+|++++.|..+.++ .+++||+
T Consensus 14 ~~~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi- 92 (135)
T TIGR03096 14 LLLMGTAQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKSPISEGFSIDAYGI- 92 (135)
T ss_pred HhhccchhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCCCCccceEECCCCc-
Confidence 3444455555789999999 6666 3568888777 9999999999999999999999999876544 4555443
Q ss_pred CCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 93 HRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 93 ~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
+..|+||++.+|+|++ +++|+|||||...
T Consensus 93 -------------s~~I~pGet~TitF~a-dKpG~Y~y~C~~H 121 (135)
T TIGR03096 93 -------------SEVIKAGETKTISFKA-DKAGAFTIWCQLH 121 (135)
T ss_pred -------------ceEECCCCeEEEEEEC-CCCEEEEEeCCCC
Confidence 2468999999999999 7999999999754
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.8e-09 Score=113.94 Aligned_cols=250 Identities=14% Similarity=0.086 Sum_probs=148.9
Q ss_pred EEEEEEEEEEecCCCe--------------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCCC
Q 007633 33 FYDWTISYVTASPLGD--------------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRKN 96 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~--------------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~ 96 (595)
++.|.++......+|. ....+++||+. .|.+.++ |.++++|+.|... ....+.+ .|... .-
T Consensus 181 d~~lvlqD~~~~~~g~~~~~~~~~~~~~g~~gd~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~-~v 257 (523)
T PRK10965 181 DIPVILQDKRFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPL-YV 257 (523)
T ss_pred eeeEEEEeeeeCCCCceeccccccccccCccCCeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceE-EE
Confidence 5556666555444432 23468999995 7898885 6699999999975 4556665 44321 12
Q ss_pred CCCCCCCC------CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC------ceeeEEEeccC---CCCCC----
Q 007633 97 SWQDGVLG------TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG------GYGGIIINNRD---VIPLP---- 157 (595)
Q Consensus 97 ~~~DGv~~------tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G------l~G~liV~~~~---~~~~~---- 157 (595)
-..||.+. ....|.|||+++..++++ +.|.++...-...+...+ -+-.+.|.... ....|
T Consensus 258 Ia~DG~~l~~P~~v~~l~lapGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~ 336 (523)
T PRK10965 258 IASDGGLLAEPVKVSELPILMGERFEVLVDTS-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLA 336 (523)
T ss_pred EEeCCCcccCccEeCeEEECccceEEEEEEcC-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhc
Confidence 46788542 335689999999999985 567776655321111100 11123333111 00111
Q ss_pred -CC-CC------CCceeEeeeccccc----------cHHHHHH--------H--------HhCC----CC-CCCCCeEEE
Q 007633 158 -FA-VP------DGDITIFISDWYTK----------SHKKLRK--------D--------VENG----VD-LGVPDGILI 198 (595)
Q Consensus 158 -~~-~~------d~e~~l~l~d~~~~----------~~~~l~~--------~--------~~~g----~~-~~~~d~~li 198 (595)
.+ .. .+.+.+.+..+... ....... . ++.+ .. ......++|
T Consensus 337 ~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 416 (523)
T PRK10965 337 SLPALPSLEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKI 416 (523)
T ss_pred cCCCCCcccccceeEEEEeeccccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 00 00 11223333221100 0000000 0 0000 00 000112489
Q ss_pred cCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee---eeeeEEEEeccce
Q 007633 199 NGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ---QNYTNMDIHVGQS 275 (595)
Q Consensus 199 NG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p---~~~d~l~i~pGqR 275 (595)
||+.+. ...+.++++.|++.+|+|+|.+....|.|||||+.|+|++.||....+ ...|++.+.+ ++
T Consensus 417 NG~~~~----------~~~~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~-~~ 485 (523)
T PRK10965 417 NGKAFD----------MNKPMFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVRVEG-GR 485 (523)
T ss_pred CCeECC----------CCCcceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEecCCCCCccccccccEEEECC-cE
Confidence 999872 123668899999999999999875589999999999999999987653 4679999976 88
Q ss_pred EEEEEEeCCC---CCcceEEEEeecc
Q 007633 276 FSFLVTTDQN---ASSDYYIVASPRF 298 (595)
Q Consensus 276 ~dvlv~~~~~---~g~~y~i~a~~~~ 298 (595)
..+++++++. +| .|.++++...
T Consensus 486 ~~i~~~f~~~~~~~g-~~~~HCHiL~ 510 (523)
T PRK10965 486 SEVLVKFDHDAPKEH-AYMAHCHLLE 510 (523)
T ss_pred EEEEEEecCCCCCCC-CEEEEeCchh
Confidence 9999999843 45 8889988743
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.8e-08 Score=110.28 Aligned_cols=234 Identities=16% Similarity=0.100 Sum_probs=141.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE-eecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV-ETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|.|++++|+++++++.|--.. ...+|.||-...-- ..||.. .+..-.|.|
T Consensus 23 ~~~~~NG~~P-------------GP~i~~~~GD~v~v~v~N~l~~-~tsiHwHGl~q~~~~~~DGv~----~vTq~pI~P 84 (539)
T TIGR03389 23 SILTVNGKFP-------------GPTLYAREGDTVIVNVTNNVQY-NVTIHWHGVRQLRNGWADGPA----YITQCPIQP 84 (539)
T ss_pred EEEEECCccc-------------CCEEEEEcCCEEEEEEEeCCCC-CeeEecCCCCCCCCCCCCCCc----ccccCCcCC
Confidence 4789999875 4999999999999999998764 44555555432211 258864 234446899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCc-----cccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT-----YFSMNQARSIRW 347 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~-----~~~~~~~~~~~~ 347 (595)
|+++...+++.+.+| .||.+++..... ....|-|...... +.+.|......+. +|.......+
T Consensus 85 G~s~~Y~f~~~~~~G-T~WYHsH~~~~~------~Gl~G~lIV~~~~---~~~~~~~~~d~e~~l~l~Dw~~~~~~~~-- 152 (539)
T TIGR03389 85 GQSYVYNFTITGQRG-TLWWHAHISWLR------ATVYGAIVILPKP---GVPYPFPKPDREVPIILGEWWNADVEAV-- 152 (539)
T ss_pred CCeEEEEEEecCCCe-eEEEecCchhhh------ccceEEEEEcCCC---CCCCCCCCCCceEEEEecccccCCHHHH--
Confidence 999999999865678 999999874221 1123333232211 1111110000000 1111000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
+. ... .... ...-...+.|||+..... .+ . +
T Consensus 153 -~~----~~~------------------~~~~--~~~~~d~~liNG~~~~~~---------------~~--~---~---- 183 (539)
T TIGR03389 153 -IN----QAN------------------QTGG--APNVSDAYTINGHPGPLY---------------NC--S---S---- 183 (539)
T ss_pred -HH----HHH------------------hcCC--CCCccceEEECCCcCCCC---------------CC--C---C----
Confidence 00 000 0000 000012366777642100 00 0 0
Q ss_pred CccceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
....+++++.|+++.+.|.|.+. ..+.|||+||.|.|++.+.. + ..|...|++.|.+|+...|.++
T Consensus 184 --~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~-~----------~~P~~~~~l~i~~GqRydVlv~ 250 (539)
T TIGR03389 184 --KDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDAT-Y----------TKPFKTKTIVIGPGQTTNVLLT 250 (539)
T ss_pred --CCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCc-c----------cCceEeCeEEecCCCEEEEEEE
Confidence 01246788999999999999975 44899999999999999642 2 2466789999999999999999
Q ss_pred ecC-cceeEEeecc
Q 007633 507 LDN-AGIWNLRAEN 519 (595)
Q Consensus 507 adN-PG~W~~HCHi 519 (595)
+++ +|.|.++-+.
T Consensus 251 a~~~~g~y~i~~~~ 264 (539)
T TIGR03389 251 ADQSPGRYFMAARP 264 (539)
T ss_pred CCCCCceEEEEEec
Confidence 986 7999888664
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-08 Score=108.92 Aligned_cols=219 Identities=17% Similarity=0.159 Sum_probs=133.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|--.. ...+|.||-.+.- -..||.+. ..-.|.|
T Consensus 49 ~~~~~NG~~P-------------GP~I~~~~GD~v~v~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~~-----tQ~pI~P 109 (539)
T PLN02835 49 QVILINGQFP-------------GPRLDVVTNDNIILNLINKLDQ-PFLLTWNGIKQRKNSWQDGVLG-----TNCPIPP 109 (539)
T ss_pred EEEEECCcCC-------------CCCEEEECCCEEEEEEEeCCCC-CCcEEeCCcccCCCCCCCCCcc-----CcCCCCC
Confidence 4789999875 4999999999999999998764 4455665554432 24699642 2357999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCc-------cccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT-------YFSMNQARSI 345 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~-------~~~~~~~~~~ 345 (595)
|+++...+++.+.+| .||.+++...... ..+.+.-|+ ..... .+.|-.. ++. +|.......+
T Consensus 110 G~sf~Y~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G~lIV-~~~~~----~~~p~~~--~d~e~~l~l~Dw~~~~~~~~ 178 (539)
T PLN02835 110 NSNYTYKFQTKDQIG-TFTYFPSTLFHKA---AGGFGAINV-YERPR----IPIPFPL--PDGDFTLLVGDWYKTSHKTL 178 (539)
T ss_pred CCcEEEEEEECCCCE-eEEEEeCccchhc---CcccceeEE-eCCCC----CCcCCCC--CCceEEEEeeccccCCHHHH
Confidence 999999998764578 9999997532110 112222233 22111 1111000 011 1110000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCC
Q 007633 346 RWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMS 425 (595)
Q Consensus 346 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~ 425 (595)
...+..... . .. .....|||+..
T Consensus 179 ~~~~~~g~~------------------------~--~~--~d~~liNG~~~----------------------------- 201 (539)
T PLN02835 179 QQRLDSGKV------------------------L--PF--PDGVLINGQTQ----------------------------- 201 (539)
T ss_pred HHHhhcCCC------------------------C--CC--CceEEEccccC-----------------------------
Confidence 000000000 0 00 01234454321
Q ss_pred CCCccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEE
Q 007633 426 RAPKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAIL 504 (595)
Q Consensus 426 ~~~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~ir 504 (595)
..+.++.|+++.|.|.|.+.. ..-||+.||+|.|++.+.... .|...|++.+.+|+...+.
T Consensus 202 -------~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v-----------~p~~~~~l~i~~GqRydvl 263 (539)
T PLN02835 202 -------STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHT-----------IQNIYDSLDVHVGQSVAVL 263 (539)
T ss_pred -------ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccC-----------CCceeeEEEECcCceEEEE
Confidence 135688999999999999865 599999999999999965321 2455799999999999999
Q ss_pred EEecC-cceeEEee
Q 007633 505 VYLDN-AGIWNLRA 517 (595)
Q Consensus 505 f~adN-PG~W~~HC 517 (595)
++++. +|.|-++-
T Consensus 264 v~~~~~~g~y~i~a 277 (539)
T PLN02835 264 VTLNQSPKDYYIVA 277 (539)
T ss_pred EEcCCCCCcEEEEE
Confidence 99975 68776663
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-08 Score=107.90 Aligned_cols=221 Identities=13% Similarity=0.072 Sum_probs=132.9
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCCCCCCCCCC----C--CCCccCCCCeEEEEEEE
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRKNSWQDGVL----G--TNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 121 (595)
..++++||+. .|.|.|+.| ++++|+.|... ....+++ +|... .--..||.. . .+..|.|||+++.-.++
T Consensus 209 gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~-~vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd~ 285 (471)
T PRK10883 209 GDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPL-HVIAGDQGFLPAPVSVKQLSLAPGERREILVDM 285 (471)
T ss_pred CCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeE-EEEEeCCCcccCCcEeCeEEECCCCeEEEEEEC
Confidence 4568999994 799999875 89999999976 5567887 55422 124578543 2 34568999999999998
Q ss_pred CCceeeeEEccCcchhhhcCcee------------eEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHH-HHhCCC
Q 007633 122 KDQIGSFFYFPSLDFQRAAGGYG------------GIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRK-DVENGV 188 (595)
Q Consensus 122 ~~~~Gt~wYH~H~~~q~~~Gl~G------------~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~-~~~~g~ 188 (595)
. +.+.+.+++-.......++.+ .+-++.....+ +. ....+..+............. .+.-+
T Consensus 286 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~p~~l~~~~~~~~~~~~~~~~~l~- 359 (471)
T PRK10883 286 S-NGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP-LV---TDNLPMRLLPDEIMEGSPIRSREISLG- 359 (471)
T ss_pred C-CCceEEEECCCccccccccccccCCccccccceeEEEEcccccc-CC---CCcCChhhcCCCCCCCCCcceEEEEec-
Confidence 4 566777776321111111111 11111111000 00 000000000000000000000 00000
Q ss_pred CCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee---eee
Q 007633 189 DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ---QNY 265 (595)
Q Consensus 189 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p---~~~ 265 (595)
.+.+.|||+.+.. ....++++.|++.+|+|.|. ..|.||||||.|+|++.||....| ...
T Consensus 360 ----~~~~~INg~~~~~----------~~~~~~~~~g~~e~W~~~n~---~~HP~HlHg~~FqVl~~~G~~~~~~~~gwk 422 (471)
T PRK10883 360 ----DDLPGINGALWDM----------NRIDVTAQQGTWERWTVRAD---MPQAFHIEGVMFLIRNVNGAMPFPEDRGWK 422 (471)
T ss_pred ----CCcCccCCcccCC----------CcceeecCCCCEEEEEEECC---CCcCEeECCccEEEEEecCCCCCccccCcC
Confidence 1234699998721 12347899999999999885 379999999999999999986543 346
Q ss_pred eEEEEeccceEEEEEEeCCCCCc--ceEEEEeecc
Q 007633 266 TNMDIHVGQSFSFLVTTDQNASS--DYYIVASPRF 298 (595)
Q Consensus 266 d~l~i~pGqR~dvlv~~~~~~g~--~y~i~a~~~~ 298 (595)
|++.+. +++.+++++++..++ .|.++++...
T Consensus 423 DTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLe 455 (471)
T PRK10883 423 DTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLE 455 (471)
T ss_pred cEEEcC--CeEEEEEEecCCCCCCCcEEeeccccc
Confidence 999993 579999999965542 5888887653
|
|
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-09 Score=98.18 Aligned_cols=90 Identities=16% Similarity=0.248 Sum_probs=74.3
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC-------------CC--CCCccCCCCeEEEEEEECCce
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV-------------LG--TNCPIPAGWNWTYQFQVKDQI 125 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-------------~~--tq~~I~PG~~~~Y~f~~~~~~ 125 (595)
.+.+.++.|+.|++.+.|....++.+|+||....-....++. ++ ....|+||+..+.+|++ +.+
T Consensus 33 ~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~-~~~ 111 (138)
T PF07731_consen 33 TPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA-DNP 111 (138)
T ss_dssp TSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE-TST
T ss_pred cceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe-ecc
Confidence 579999999999999999999999999999987421111111 12 33568999999999999 699
Q ss_pred eeeEEccCcchhhhcCceeeEEEecc
Q 007633 126 GSFFYFPSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 126 Gt~wYH~H~~~q~~~Gl~G~liV~~~ 151 (595)
|.|.||||...|...||.+.+.|.+.
T Consensus 112 G~w~~HCHi~~H~~~GM~~~~~v~~~ 137 (138)
T PF07731_consen 112 GPWLFHCHILEHEDNGMMAVFVVGPQ 137 (138)
T ss_dssp EEEEEEESSHHHHHTT-EEEEEECHH
T ss_pred eEEEEEEchHHHHhCCCeEEEEEcCC
Confidence 99999999999999999999999874
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.9e-08 Score=105.78 Aligned_cols=230 Identities=17% Similarity=0.118 Sum_probs=138.0
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|.... ...+|.||-...- -..||.+. ..-.|.|
T Consensus 47 ~~~~iNGq~P-------------GP~I~~~~GD~v~V~v~N~l~~-~ttiHWHGi~q~~~~~~DGv~~-----TQcpI~P 107 (552)
T PLN02354 47 QVILINGQFP-------------GPNINSTSNNNIVINVFNNLDE-PFLLTWSGIQQRKNSWQDGVPG-----TNCPIPP 107 (552)
T ss_pred EEEEECCCCc-------------CCcEEEeCCCEEEEEEEECCCC-CcccccccccCCCCcccCCCcC-----CcCCCCC
Confidence 4789999875 4999999999999999998753 4445555543332 24799652 3458999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCc-----cccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT-----YFSMNQARSIRW 347 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~-----~~~~~~~~~~~~ 347 (595)
|+.+...+++++.+| .||.+++...... ..+.+ +++-.. .. ..+.|-.....+. +|.......+..
T Consensus 108 G~sf~Y~F~~~~q~G-T~WYHsH~~~Q~~---~Gl~G-~lII~~-~~---~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~ 178 (552)
T PLN02354 108 GTNFTYHFQPKDQIG-SYFYYPSTGMHRA---AGGFG-GLRVNS-RL---LIPVPYADPEDDYTVLIGDWYTKSHTALKK 178 (552)
T ss_pred CCcEEEEEEeCCCCc-ceEEecCccceec---CCccc-eEEEcC-Cc---CCCCCCCCcCceEEEEeeeeccCCHHHHHH
Confidence 999999999864578 9999987632111 01222 233222 11 0011110000000 111100000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
.+... . .........|||+.... +
T Consensus 179 ~~~~g------------------------~----~~~~~d~~liNG~~~~~----------------~------------ 202 (552)
T PLN02354 179 FLDSG------------------------R----TLGRPDGVLINGKSGKG----------------D------------ 202 (552)
T ss_pred HHhcC------------------------C----CCCCCCeEEEeCCcCCC----------------C------------
Confidence 00000 0 00001134566653210 0
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
......++++.|+++.|.|.|.+.. ..-||+.||.|.|++.+.... .|...|++.|.+|....+.++
T Consensus 203 -~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v-----------~p~~~~~l~i~~GqRydVlv~ 270 (552)
T PLN02354 203 -GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHV-----------LQNDYDSLDVHVGQCFSVLVT 270 (552)
T ss_pred -CCCceEEEECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCccc-----------CCcceeEEEEccCceEEEEEE
Confidence 0013457889999999999998764 589999999999999964322 244579999999999999999
Q ss_pred ecC-cceeEEeecc
Q 007633 507 LDN-AGIWNLRAEN 519 (595)
Q Consensus 507 adN-PG~W~~HCHi 519 (595)
++. +|.|-++-..
T Consensus 271 a~~~~g~Y~i~a~~ 284 (552)
T PLN02354 271 ANQAPKDYYMVAST 284 (552)
T ss_pred CCCCCCcEEEEEec
Confidence 975 7988777653
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=104.21 Aligned_cols=220 Identities=14% Similarity=0.162 Sum_probs=129.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE-eecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV-ETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|--.+ ...+|.||..+.-- .+||.+- .+-.|.|
T Consensus 46 ~~~~vNG~~P-------------GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~g-----tQcpI~P 106 (545)
T PLN02168 46 QVIVINDMFP-------------GPLLNATANDVINVNIFNNLTE-PFLMTWNGLQLRKNSWQDGVRG-----TNCPILP 106 (545)
T ss_pred EEEEECCcCC-------------CCcEEEECCCEEEEEEEeCCCC-CccEeeCCccCCCCCCcCCCCC-----CcCCCCC
Confidence 4689999875 4999999999999999998764 45556666443222 2599652 3357999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
|+++...+++++.+| .||.+++....-. ....|-|....... ...+.+.... +....+. +|.....
T Consensus 107 G~sftY~F~~~~q~G-T~WYHsH~~~Q~~-----~GL~G~lII~~~~~-~~~p~~~~d~--e~~l~l~-----Dw~~~~~ 172 (545)
T PLN02168 107 GTNWTYRFQVKDQIG-SYFYFPSLLLQKA-----AGGYGAIRIYNPEL-VPVPFPKPDE--EYDILIG-----DWFYADH 172 (545)
T ss_pred CCcEEEEEEeCCCCc-eEEEecChhhhhh-----CcceeEEEEcCCcc-cCcCcCcccc--eeeEEEE-----ecCCCCH
Confidence 999999999865588 9999998642111 11223222322110 1111111110 0000000 0100000
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. ..... +.... .........|||+.- ..
T Consensus 173 ------~--------~~~~~--~~~g~--~~~~~d~~liNG~~~----------------------------------~~ 200 (545)
T PLN02168 173 ------T--------VMRAS--LDNGH--SLPNPDGILFNGRGP----------------------------------EE 200 (545)
T ss_pred ------H--------HHHhh--hhcCC--CCCCCCEEEEeccCC----------------------------------Cc
Confidence 0 00000 00000 000001234555421 01
Q ss_pred eEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 433 SLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
..++++.|+++.+.|.|.+.. .+.|++.||+|+|++.+... ..|...|++.|.+|+..-+.+++++
T Consensus 201 ~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~-----------v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 201 TFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTY-----------VQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred ceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeE-----------CCCceeeEEEEcCCceEEEEEEcCC
Confidence 246788999999999998754 59999999999999986432 2355579999999999999999974
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=104.34 Aligned_cols=225 Identities=16% Similarity=0.193 Sum_probs=135.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEe---ecCcceeeeeeeEEEE
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVE---TEGSYTVQQNYTNMDI 270 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via---~DG~~~~p~~~d~l~i 270 (595)
..++|||+.. .|+|++++|+++++++.|-..+ . ..||-|-+.+.. +||... .+-.|
T Consensus 36 ~~~~vNGq~P-------------GP~I~~~~GD~v~V~v~N~L~~-~--ttiHWHGl~q~~~~~~DGv~~-----tqcPI 94 (536)
T PLN02792 36 RGILINGQFP-------------GPEIRSLTNDNLVINVHNDLDE-P--FLLSWNGVHMRKNSYQDGVYG-----TTCPI 94 (536)
T ss_pred EEEEECCCCC-------------CCcEEEECCCEEEEEEEeCCCC-C--cCEeCCCcccCCCCccCCCCC-----CcCcc
Confidence 4789999975 4999999999999999998653 3 355555555544 799642 23589
Q ss_pred eccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCC---ccccccccccccc
Q 007633 271 HVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYD---TYFSMNQARSIRW 347 (595)
Q Consensus 271 ~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~---~~~~~~~~~~~~~ 347 (595)
.||+.+...+++++.+| .||.+++...... ..+.+ +++-+..... ..+.+....... .+|.......+..
T Consensus 95 ~PG~sftY~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G-~liI~~~~~~--~~p~~~~d~e~~i~l~Dw~~~~~~~~~~ 167 (536)
T PLN02792 95 PPGKNYTYDFQVKDQVG-SYFYFPSLAVQKA---AGGYG-SLRIYSLPRI--PVPFPEPAGDFTFLIGDWYRRNHTTLKK 167 (536)
T ss_pred CCCCcEEEEEEeCCCcc-ceEEecCcchhhh---ccccc-ceEEeCCccc--CcCCCcccceeEEEecccccCCHHHHHH
Confidence 99999999999865578 9999998642111 01222 2333331110 111111000000 0111100000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
.+... .. .........|||+...
T Consensus 168 ~~~~g------------------------~~---~~~~~d~~liNG~~~~------------------------------ 190 (536)
T PLN02792 168 ILDGG------------------------RK---LPLMPDGVMINGQGVS------------------------------ 190 (536)
T ss_pred Hhhcc------------------------Cc---CCCCCCEEEEeccCCC------------------------------
Confidence 00000 00 0000012445554210
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
....+.++.|+++.+.|.|.+.. ..-|++.||+|.|++.+.... .|...|++.|.+|....+.++
T Consensus 191 ---~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v-----------~p~~~~~l~i~~GqRydVlV~ 256 (536)
T PLN02792 191 ---YVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHT-----------VQSMYTSLDIHVGQTYSVLVT 256 (536)
T ss_pred ---CcceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccC-----------CCcceeEEEEccCceEEEEEE
Confidence 01346788999999999998765 589999999999999965322 245579999999999999999
Q ss_pred ecC-cceeEEee
Q 007633 507 LDN-AGIWNLRA 517 (595)
Q Consensus 507 adN-PG~W~~HC 517 (595)
++. +|.|-+.-
T Consensus 257 a~~~~g~Y~i~a 268 (536)
T PLN02792 257 MDQPPQNYSIVV 268 (536)
T ss_pred cCCCCceEEEEE
Confidence 976 57766653
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-07 Score=104.39 Aligned_cols=221 Identities=18% Similarity=0.167 Sum_probs=133.3
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCcee-EEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLL-LVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~-via~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|.-.. ...+|.||-... --.+||.+. ..-.|.|
T Consensus 48 ~~~~vNG~~P-------------GP~I~~~~GD~v~V~V~N~L~~-~ttiHWHGi~q~~~~~~DGv~~-----tQcpI~P 108 (543)
T PLN02991 48 QGILINGKFP-------------GPDIISVTNDNLIINVFNHLDE-PFLISWSGIRNWRNSYQDGVYG-----TTCPIPP 108 (543)
T ss_pred EEEEEcCCCC-------------CCcEEEECCCEEEEEecCCCCC-CccEEECCcccCCCccccCCCC-----CCCccCC
Confidence 4789999875 4999999999999999998653 444555554432 134799642 2457999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCc-----cccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT-----YFSMNQARSIRW 347 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~-----~~~~~~~~~~~~ 347 (595)
|+++...+++++.+| .||.+++...... ..+.+ +++-..... .+.|......+. +|.......+..
T Consensus 109 G~sftY~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G-~lIV~~~~~----~~~p~~~~d~d~~i~l~DW~~~~~~~~~~ 179 (543)
T PLN02991 109 GKNYTYALQVKDQIG-SFYYFPSLGFHKA---AGGFG-AIRISSRPL----IPVPFPAPADDYTVLIGDWYKTNHKDLRA 179 (543)
T ss_pred CCcEEEEEEeCCCCc-ceEEecCcchhhh---CCCee-eEEEeCCcc----cCcccccccceeEEEecceecCCHHHHHH
Confidence 999999999865578 9999998643211 11222 233332111 111110000000 111100000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
.+... . .........|||+..
T Consensus 180 ~~~~~------------------------~----~~~~~d~~liNG~~~------------------------------- 200 (543)
T PLN02991 180 QLDNG------------------------G----KLPLPDGILINGRGS------------------------------- 200 (543)
T ss_pred HhhcC------------------------C----CCCCCCEEEEccCCC-------------------------------
Confidence 00000 0 000001234455421
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
...++++.|+++.+.|.|.+.. .+-|+|.||.|+|++.+.. + ..|...|++.|.+|...-+.++
T Consensus 201 ----~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~-~----------~~p~~~~~l~i~~GQRydvlv~ 265 (543)
T PLN02991 201 ----GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGT-H----------TIQTPFSSLDVHVGQSYSVLIT 265 (543)
T ss_pred ----CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCc-c----------ccceeeeEEEEcCCcEEEEEEE
Confidence 1246788999999999998765 4899999999999999643 2 2356679999999999999999
Q ss_pred ecCc-ceeEEe
Q 007633 507 LDNA-GIWNLR 516 (595)
Q Consensus 507 adNP-G~W~~H 516 (595)
+|++ |.|-+.
T Consensus 266 a~~~~~~y~i~ 276 (543)
T PLN02991 266 ADQPAKDYYIV 276 (543)
T ss_pred CCCCCCcEEEE
Confidence 9874 644433
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.4e-07 Score=101.39 Aligned_cols=233 Identities=15% Similarity=0.163 Sum_probs=136.4
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE-eecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV-ETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|-... ...+|.||..+..- ..||... ..-.|.|
T Consensus 49 ~vi~vNGq~P-------------GPtI~~~~GD~v~V~V~N~L~~-~ttIHWHGl~q~~t~w~DGv~~-----TQcPI~P 109 (596)
T PLN00044 49 EAIGINGQFP-------------GPALNVTTNWNLVVNVRNALDE-PLLLTWHGVQQRKSAWQDGVGG-----TNCAIPA 109 (596)
T ss_pred EEEEEcCcCC-------------CCcEEEECCCEEEEEEEeCCCC-CccEEECCccCCCCccccCCCC-----CcCCcCC
Confidence 4789999875 4999999999999999998764 55666666554432 4799642 4468999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCC-----ccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYD-----TYFSMNQARSIRW 347 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~-----~~~~~~~~~~~~~ 347 (595)
|+++...+++++.+| .||.+++...... ..+.+ +++-+..... ..|.+. +...+ .+|.......+..
T Consensus 110 G~sftY~F~~~dq~G-T~WYHsH~~~Q~~---~Gl~G-alII~~~~~~--~~P~~~-~~~~e~~i~l~DW~~~~~~~~~~ 181 (596)
T PLN00044 110 GWNWTYQFQVKDQVG-SFFYAPSTALHRA---AGGYG-AITINNRDVI--PIPFGF-PDGGDITLFIADWYARDHRALRR 181 (596)
T ss_pred CCcEEEEEEeCCCCc-eeEeeccchhhhh---CcCee-EEEEcCcccc--cccccC-CcccceEEEecccccCCHHHHHH
Confidence 999999999965678 9999997643111 01222 3333321111 111111 00000 0121111000000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 348 NVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
.+..+...+ .. ....|||+.-...+ ... ..++
T Consensus 182 ~l~~g~~~~-------------------------~~---d~~lING~g~~~~n------------~~~-------~~~~- 213 (596)
T PLN00044 182 ALDAGDLLG-------------------------AP---DGVLINAFGPYQYN------------DSL-------VPPG- 213 (596)
T ss_pred HHhcCCCCC-------------------------CC---CceEEcccCccccC------------Ccc-------ccCC-
Confidence 000000000 00 01224443210000 000 0000
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
....+++++.|+++.|.|.|.+.. .--|+|.||+|.|++.+ |.+ ..|..-|.+.|.+|...-+.++
T Consensus 214 --~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~D-G~~----------v~P~~vd~i~I~~GQRydVLV~ 280 (596)
T PLN00044 214 --ITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAE-GSY----------TSQQNYTNLDIHVGQSYSFLLT 280 (596)
T ss_pred --CccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeC-Ccc----------cCceeeeeEEEcCCceEEEEEE
Confidence 012367899999999999998754 47899999999999996 332 2466789999999999999999
Q ss_pred ecCc-c--eeE
Q 007633 507 LDNA-G--IWN 514 (595)
Q Consensus 507 adNP-G--~W~ 514 (595)
+|.+ | .|+
T Consensus 281 a~q~~~~~Y~i 291 (596)
T PLN00044 281 MDQNASTDYYV 291 (596)
T ss_pred CCCCCCCceEE
Confidence 9875 5 466
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-06 Score=97.09 Aligned_cols=241 Identities=15% Similarity=0.119 Sum_probs=142.1
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|+|++++|+++++++.|.-......+|.||-.+.- -..||.+. +..-.|.|
T Consensus 28 ~~~~~NG~~P-------------GP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~----vTQcpI~P 90 (538)
T TIGR03390 28 YSVVVNGTSP-------------GPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPL----ASQWPIPP 90 (538)
T ss_pred EEEEECCcCC-------------CCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcc----cccCCCCC
Confidence 4799999875 499999999999999999754334556666654432 24799764 23346889
Q ss_pred cceEEEEEEeC-CCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCC--Cccccccccccccccc
Q 007633 273 GQSFSFLVTTD-QNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAY--DTYFSMNQARSIRWNV 349 (595)
Q Consensus 273 GqR~dvlv~~~-~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~--~~~~~~~~~~~~~~~l 349 (595)
|+.+...++++ +.+| .||.+++... +. ....|.|...... ..+..-..+.. -.+|.......+...+
T Consensus 91 G~sf~Y~f~~~~~q~G-T~WYHsH~~~--Q~----~~l~G~lIV~~~~---~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~ 160 (538)
T TIGR03390 91 GHFFDYEIKPEPGDAG-SYFYHSHVGF--QA----VTAFGPLIVEDCE---PPPYKYDDERILLVSDFFSATDEEIEQGL 160 (538)
T ss_pred CCcEEEEEEecCCCCe-eeEEecCCch--hh----hcceeEEEEccCC---ccCCCccCcEEEEEeCCCCCCHHHHHhhh
Confidence 99999999875 3578 9999998642 21 1133433333221 10110000000 0011111100000000
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCc
Q 007633 350 SAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429 (595)
Q Consensus 350 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~ 429 (595)
.. .+ .. .........|||+......... ..+ ...|
T Consensus 161 ~~---~~--------------------~~---~~~~~d~~liNG~~~~~~~~~~-------~~~------------~~~~ 195 (538)
T TIGR03390 161 LS---TP--------------------FT---WSGETEAVLLNGKSGNKSFYAQ-------INP------------SGSC 195 (538)
T ss_pred hc---cC--------------------Cc---cCCCCceEEECCcccccccccc-------ccC------------CCCC
Confidence 00 00 00 0001123567776421100000 000 0001
Q ss_pred cceeEEecCCCcEEEEEEEcCCCc-cceeeecCce-EEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe
Q 007633 430 VDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYA-FFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL 507 (595)
Q Consensus 430 ~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~-F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a 507 (595)
....+.++.|+++.+.|.|.+.. ..-|+++||. |+|++.+.. +..|...|++.|.+|+..-|.+++
T Consensus 196 -~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRydVlv~~ 263 (538)
T TIGR03390 196 -MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRYSVLFKA 263 (538)
T ss_pred -cceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEEEEEEEC
Confidence 13468899999999999999865 4899999999 999999653 234677899999999999999999
Q ss_pred cCc--------ceeEEeec
Q 007633 508 DNA--------GIWNLRAE 518 (595)
Q Consensus 508 dNP--------G~W~~HCH 518 (595)
+++ |.|.++--
T Consensus 264 ~~~~~~~~~~~~~Y~ir~~ 282 (538)
T TIGR03390 264 KTEDELCGGDKRQYFIQFE 282 (538)
T ss_pred CCccccccCCCCcEEEEEe
Confidence 864 77766644
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.2e-07 Score=98.30 Aligned_cols=231 Identities=13% Similarity=0.010 Sum_probs=142.4
Q ss_pred CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCCC----C-CCCccCCCCeEEEEEE
Q 007633 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGVL----G-TNCPIPAGWNWTYQFQ 120 (595)
Q Consensus 47 G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~-tq~~I~PG~~~~Y~f~ 120 (595)
|.......+||+. -|.+ +.++..+++|+.|.- .....+++.|.... .-..||.+ . .+..+.|||+++..-.
T Consensus 186 ~~~g~~~~vnG~~-~p~~-~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~-Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 186 GFPGDTLLVNGAI-LPFK-AVPGGVVRLRLLNAGNARTYHLALGGGPLT-VIAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred CCCCCeEEECCCc-ccee-ecCCCeEEEEEEecCCceEEEEEecCceEE-EEEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 3445566777743 3444 455555999999997 56666666655443 23467765 2 4467999999999998
Q ss_pred ECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeecc-ccccHHHHHHHH-hCC----C-----C
Q 007633 121 VKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDW-YTKSHKKLRKDV-ENG----V-----D 189 (595)
Q Consensus 121 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~-~~~~~~~l~~~~-~~g----~-----~ 189 (595)
.+ ..|++=+.|.. .+..+-+.+..-...... .++...+.+......|- ...........+ +.+ . .
T Consensus 263 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 338 (451)
T COG2132 263 MN-DGGAVTLTALG-EDMPDTLKGFRAPNPILT--PSYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLIG 338 (451)
T ss_pred cC-CCCeEEEEecc-ccCCceeeeeeccccccc--cccccccccccCCCcchhhccccccchhhcCCCcccccccchhhc
Confidence 85 47888888876 222222222222221110 11111111111111110 000000000000 010 0 0
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce---eeeeee
Q 007633 190 LGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT---VQQNYT 266 (595)
Q Consensus 190 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~---~p~~~d 266 (595)
......+.+||+.+.. ....+.++.|+++||++.|-+. ..|.||+||+.|+|++.| ... .+...|
T Consensus 339 ~~~~~~~~~n~~~~~~----------~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~-~~~~~~~~~~kD 406 (451)
T COG2132 339 GIGGYVWAINGKAFDD----------NRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD-APAPGAAPGWKD 406 (451)
T ss_pred ccccccccccCccCCC----------CcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC-CCcccccCccce
Confidence 0112458889988731 2477899999999999999998 699999999999999999 222 246789
Q ss_pred EEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 267 ~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++.+.+|+++.+.++++ .+| .|.++++...
T Consensus 407 Tv~v~~~~~~~v~~~a~-~~g-~~~~HCH~l~ 436 (451)
T COG2132 407 TVLVAPGERLLVRFDAD-YPG-PWMFHCHILE 436 (451)
T ss_pred EEEeCCCeEEEEEEeCC-CCC-ceEEeccchh
Confidence 99999999999999988 567 9999998754
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.9e-06 Score=95.67 Aligned_cols=254 Identities=13% Similarity=0.108 Sum_probs=140.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE-eecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV-ETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|........+|.||+...-- ..||..- +..-.|.|
T Consensus 21 ~~~~~Ng~~p-------------GP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~----vtq~~I~P 83 (541)
T TIGR03388 21 LVIGINGQFP-------------GPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAG----VTQCAINP 83 (541)
T ss_pred eEEEECCcCC-------------CCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCc----cccCCcCC
Confidence 4789999875 4999999999999999998654567788888753221 2588542 24457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCC--Ccccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAY--DTYFSMNQARSIRWNVS 350 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~--~~~~~~~~~~~~~~~l~ 350 (595)
|+++...+++++ +| .||.+++...... ....+-|....... ...+..-..+.. -.+|...........+.
T Consensus 84 G~s~~y~f~~~~-~G-t~wyH~H~~~q~~-----~Gl~G~liV~~~~~-~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~ 155 (541)
T TIGR03388 84 GETFIYNFVVDR-PG-TYFYHGHYGMQRS-----AGLYGSLIVDVPDG-EKEPFHYDGEFNLLLSDWWHKSIHEQEVGLS 155 (541)
T ss_pred CCEEEEEEEcCC-CE-EEEEEecchHHhh-----ccceEEEEEecCCC-CCCCccccceEEEEeecccCCCHHHHHhhcc
Confidence 999999999874 77 9999998632111 12233333332211 011111000000 00111110000000000
Q ss_pred cCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCC-CCCcHhhhhhcCCCCccccCCCCCCCCCCCc
Q 007633 351 AGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLP-PSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429 (595)
Q Consensus 351 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~-~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~ 429 (595)
. .+. . .........+||+.... ...... ... ..+.+ ..++...
T Consensus 156 ----~-~~~----------------~-----~~~~~d~~liNG~g~~~~~~~~~~-~~~--~~~~~-------~~~~~~~ 199 (541)
T TIGR03388 156 ----S-KPM----------------R-----WIGEPQSLLINGRGQFNCSLAAKF-SST--NLPQC-------NLKGNEQ 199 (541)
T ss_pred ----c-CCC----------------c-----CCCCCcceEECCCCCCCCcccccc-Ccc--ccchh-------hccCCCC
Confidence 0 000 0 00001123456543110 000000 000 00000 0000000
Q ss_pred cceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec
Q 007633 430 VDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD 508 (595)
Q Consensus 430 ~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad 508 (595)
....+++++.|+++.|.|.|.+. ..+.|+++||+|+|++.+.+. ..|..-|.+.|.+|+..-+.++++
T Consensus 200 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VIa~DG~~-----------v~P~~v~~l~i~~GqR~dvlv~~~ 268 (541)
T TIGR03388 200 CAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEADGNY-----------VEPFTVKDIDIYSGETYSVLLTTD 268 (541)
T ss_pred CCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEEEeCCEe-----------cccceeCeEEecCCCEEEEEEeCC
Confidence 11235789999999999999874 569999999999999997542 235667999999999999999997
Q ss_pred C-cc-eeEEeecc
Q 007633 509 N-AG-IWNLRAEN 519 (595)
Q Consensus 509 N-PG-~W~~HCHi 519 (595)
. || .|-++--.
T Consensus 269 ~~~~~~y~ira~~ 281 (541)
T TIGR03388 269 QDPSRNYWISVGV 281 (541)
T ss_pred CCCCCcEEEEEec
Confidence 5 44 56666443
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.5e-06 Score=96.99 Aligned_cols=250 Identities=15% Similarity=0.148 Sum_probs=142.4
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.++++.|++++++|.|......+.+|.||+...- ...||.. .++...|.|
T Consensus 44 ~~~~~Ng~~p-------------gP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~p 106 (566)
T PLN02604 44 LVITINGRSP-------------GPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTE----GVTQCPILP 106 (566)
T ss_pred eEEEECCccC-------------CCcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCccccCCC----ccccCccCC
Confidence 4689999885 389999999999999999875457788998885422 1258843 134568899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCC--CCcccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNA--YDTYFSMNQARSIRWNVS 350 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~--~~~~~~~~~~~~~~~~l~ 350 (595)
||++...++++ .+| .||.+++...... ....+-|.+..... ...+.+...+. .-.+|...........+.
T Consensus 107 g~s~~y~f~~~-~~G-t~wyH~H~~~q~~-----~Gl~G~liV~~~~~-~~~p~~~d~d~~l~l~Dw~~~~~~~~~~~~~ 178 (566)
T PLN02604 107 GETFTYEFVVD-RPG-TYLYHAHYGMQRE-----AGLYGSIRVSLPRG-KSEPFSYDYDRSIILTDWYHKSTYEQALGLS 178 (566)
T ss_pred CCeEEEEEEcC-CCE-EEEEeeCcHHHHh-----CCCeEEEEEEecCC-CCCccccCcceEEEeeccccCCHHHHHHhhc
Confidence 99999999997 578 9999998642111 12333333432211 01111110000 000121111100000000
Q ss_pred cCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCC-C--CCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 351 AGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLP-P--STPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 351 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~-~--~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
..|.. .........+||+.... . ..|.. ..+. + .+..
T Consensus 179 -----~~~~~---------------------~~~~~d~~liNG~G~~~~~~~~~~~~------~~~~-~-------~~~~ 218 (566)
T PLN02604 179 -----SIPFD---------------------WVGEPQSLLIQGKGRYNCSLVSSPYL------KAGV-C-------NATN 218 (566)
T ss_pred -----cCCCc---------------------cCCCCCceEEcCCCCCCCccccCccc------cccc-c-------ccCC
Confidence 00000 00000122344432110 0 00000 0000 0 0000
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
.......++++.|+++.|.|.|.+.. ..-|++.||+|+|++.++.. ..|..-|.+.|.+|+..-+.++
T Consensus 219 ~~~~~~~~~v~~g~~~RlRlINa~~~~~~~~sidgH~~~VIa~DG~~-----------v~P~~v~~l~l~~GqRydvlV~ 287 (566)
T PLN02604 219 PECSPYVLTVVPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHY-----------VEPFVVKNLFIYSGETYSVLVK 287 (566)
T ss_pred CCCCceEEEecCCCEEEEEEEeccccceEEEEECCCEEEEEEeCCEe-----------cccceeeeEEEccCCeEEEEEE
Confidence 00122367889999999999998764 58999999999999996532 2366789999999999999999
Q ss_pred ecC-cc-eeEEeecc
Q 007633 507 LDN-AG-IWNLRAEN 519 (595)
Q Consensus 507 adN-PG-~W~~HCHi 519 (595)
++. || .|-++...
T Consensus 288 ~~~~~~~~y~ira~~ 302 (566)
T PLN02604 288 ADQDPSRNYWVTTSV 302 (566)
T ss_pred CCCCCCCCEEEEEec
Confidence 975 45 56667554
|
|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-06 Score=77.15 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=56.1
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+| +++|....++++.+.|.. +...+...+.||++++|.|.. +|+|-|+|- .|...
T Consensus 46 P~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~--------~~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~--~H~~~ 110 (119)
T PRK02710 46 PSTLTIKAGDTV--KWVNNKLAPHNAVFDGAK--------ELSHKDLAFAPGESWEETFSE---AGTYTYYCE--PHRGA 110 (119)
T ss_pred CCEEEEcCCCEE--EEEECCCCCceEEecCCc--------cccccccccCCCCEEEEEecC---CEEEEEEcC--CCccC
Confidence 378999999985 567887778888765431 111122357899999988864 899999997 66778
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 111 gM~G~I~V~ 119 (119)
T PRK02710 111 GMVGKITVE 119 (119)
T ss_pred CcEEEEEEC
Confidence 999999984
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.54 E-value=9e-08 Score=83.94 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=67.7
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-cc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN-AG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN-PG 511 (595)
+++.++.|+.|++.+.|.....+.+|+||...- ...|....+ ... .-.|.||+....+|.++. +|
T Consensus 26 PtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~-----~~~~~DG~~--~~~-------~~~i~pG~~~~Y~~~~~~~~G 91 (117)
T PF07732_consen 26 PTIRVREGDTVRITVTNNLDEPTSIHWHGLHQP-----PSPWMDGVP--GVT-------QCPIAPGESFTYEFTANQQAG 91 (117)
T ss_dssp EEEEEETTEEEEEEEEEESSSGBSEEEETSBST-----TGGGGSGGT--TTS-------GSSBSTTEEEEEEEEESSCSE
T ss_pred CEEEEEcCCeeEEEEEeccccccccccceeeee-----eeeecCCcc--ccc-------ceeEEeecceeeeEeeecccc
Confidence 467899999999999999888999999997641 100110000 000 014788999999999988 99
Q ss_pred eeEEeeccccceeccceEEEEEecC
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
.|.||||...+..+||...+.|.++
T Consensus 92 t~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 92 TYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred ceeEeeCCCchhcCcCEEEEEEcCC
Confidence 9999999988767999999988765
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.2e-06 Score=93.29 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=137.8
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+.. .|.|++++|+++++++.|--......+|.||....- -..||.+- +..-.|.|
T Consensus 43 ~v~~vNg~~p-------------GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~g----vtq~pI~P 105 (574)
T PLN02191 43 AVMTVNGQFP-------------GPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAG----VTQCAINP 105 (574)
T ss_pred eEEEECCcCC-------------CCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCc----cccCCcCC
Confidence 5789999875 499999999999999999765445666777765432 13588642 23356999
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCc-------cccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT-------YFSMNQARSI 345 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~-------~~~~~~~~~~ 345 (595)
|+++...+++++ +| .||.+++...... ....|-|.......+. .+. .++. +|........
T Consensus 106 G~s~~Y~f~~~~-~G-T~wYHsH~~~q~~-----~Gl~G~liV~~~~~~~-~~~-----~~d~e~~l~l~Dw~~~~~~~~ 172 (574)
T PLN02191 106 GETFTYKFTVEK-PG-THFYHGHYGMQRS-----AGLYGSLIVDVAKGPK-ERL-----RYDGEFNLLLSDWWHESIPSQ 172 (574)
T ss_pred CCeEEEEEECCC-Ce-EEEEeeCcHHHHh-----CCCEEEEEEccCCCCC-CCC-----CCCeeEEEeeeccccCChHHH
Confidence 999999999974 78 9999998642111 1122333332211111 011 1111 1211000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCC
Q 007633 346 RWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMS 425 (595)
Q Consensus 346 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~ 425 (595)
...+.. .+.. .........+||+.-..-........ ...+..+. ...+
T Consensus 173 ~~~~~~---~~~~-----------------------~~~~~d~~liNG~g~~~~~~~~~~~~--~~~~~~~~----~~~n 220 (574)
T PLN02191 173 ELGLSS---KPMR-----------------------WIGEAQSILINGRGQFNCSLAAQFSN--GTELPMCT----FKEG 220 (574)
T ss_pred HHhhcc---CCCC-----------------------cCCCCCceEECCCCCCCCcccccccC--Ccccccce----eccC
Confidence 000000 0000 00001123445432110000000000 00000000 0001
Q ss_pred CCCccceeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEE
Q 007633 426 RAPKVDTSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAIL 504 (595)
Q Consensus 426 ~~~~~~~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~ir 504 (595)
+ .....+++++.|+++.+.|.|.+.. .+-|++.||+|.|++.+... ..|...|.+.|.+|+..-+.
T Consensus 221 ~--~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~-----------v~P~~v~~l~i~~GqRydVl 287 (574)
T PLN02191 221 D--QCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGNY-----------ITPFTTDDIDIYSGESYSVL 287 (574)
T ss_pred C--CCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCeEEEEEcCCee-----------ccceEeeeEEEcCCCeEEEE
Confidence 1 0012368899999999999998754 58999999999999996432 24667899999999999999
Q ss_pred EEecC-cc-eeEEee
Q 007633 505 VYLDN-AG-IWNLRA 517 (595)
Q Consensus 505 f~adN-PG-~W~~HC 517 (595)
++++. +| .|-++-
T Consensus 288 V~a~~~~~~~y~ira 302 (574)
T PLN02191 288 LTTDQDPSQNYYISV 302 (574)
T ss_pred EECCCCCCCCEEEEE
Confidence 99976 44 444443
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-06 Score=75.08 Aligned_cols=70 Identities=16% Similarity=0.220 Sum_probs=47.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
.+|++++|+.|+|+++|.....+.+...++... ..|.||++.++.|.. +++|+|=|||..+. .
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~~------------~~l~~g~~~~~~f~~-~~~G~y~~~C~~~~---~- 97 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDLGIS------------KVLPPGETATVTFTP-LKPGEYEFYCTMHP---N- 97 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGGTEE------------EEE-TT-EEEEEEEE--S-EEEEEB-SSS----T-
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCCceE------------EEECCCCEEEEEEcC-CCCEEEEEEcCCCC---c-
Confidence 599999999999999999888877776665321 468999999999987 68999999999655 2
Q ss_pred ceeeEEE
Q 007633 142 GYGGIII 148 (595)
Q Consensus 142 l~G~liV 148 (595)
|.|.|+|
T Consensus 98 m~G~liV 104 (104)
T PF13473_consen 98 MKGTLIV 104 (104)
T ss_dssp TB-----
T ss_pred ceecccC
Confidence 7787775
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.4e-06 Score=71.75 Aligned_cols=83 Identities=14% Similarity=0.190 Sum_probs=57.3
Q ss_pred CCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCC-CCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchh
Q 007633 60 PGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS-WQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ 137 (595)
Q Consensus 60 PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~-~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 137 (595)
--..|++++||+| +++|.-..++++.++........ ...+... +...+.||+++++.|.. +|+|.|||. .|
T Consensus 15 ~P~~i~v~~G~~V--~~~N~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~--~H 87 (99)
T TIGR02656 15 EPAKISIAAGDTV--EWVNNKGGPHNVVFDEDAVPAGVKELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE--PH 87 (99)
T ss_pred eCCEEEECCCCEE--EEEECCCCCceEEECCCCCccchhhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC--Cc
Confidence 3468999999986 56687667777776543211000 0001111 22457899999998864 999999998 78
Q ss_pred hhcCceeeEEEe
Q 007633 138 RAAGGYGGIIIN 149 (595)
Q Consensus 138 ~~~Gl~G~liV~ 149 (595)
..+||.|.|+|+
T Consensus 88 ~~aGM~G~I~V~ 99 (99)
T TIGR02656 88 RGAGMVGKITVE 99 (99)
T ss_pred cccCCEEEEEEC
Confidence 888999999984
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.4e-05 Score=81.41 Aligned_cols=229 Identities=19% Similarity=0.239 Sum_probs=135.7
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCc-eeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN-LLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~-~~via~DG~~~~p~~~d~l~i~p 272 (595)
..++|||+-. .|.|.++.|+++.++++|-.. ..+.+|.||-. ..--..||.++ +.=.|.|
T Consensus 48 ~vi~iNG~fP-------------GP~I~~~~gD~ivV~v~N~~~-~~~sihWhGv~q~kn~w~DG~~~-----TqCPI~P 108 (563)
T KOG1263|consen 48 QVITINGQFP-------------GPTINAEEGDTIVVNVVNRLD-EPFSIHWHGVRQRKNPWQDGVYI-----TQCPIQP 108 (563)
T ss_pred eeEeecCCCC-------------CCeEEEEeCCEEEEEEEeCCC-CceEEEeccccccCCccccCCcc-----ccCCcCC
Confidence 4689999985 499999999999999999844 34445555532 22335599553 4457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCC---cccccc-cccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYD---TYFSMN-QARSIRWN 348 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~---~~~~~~-~~~~~~~~ 348 (595)
||.|-..+++++..| +||-+++..+... ....|-|....... .+-|.+.....+. .+|-.+ ..+.++..
T Consensus 109 g~~~tY~F~v~~q~G-T~~yh~h~~~~Ra-----~G~~G~liI~~~~~-~p~pf~~pd~E~~ill~dW~~~~~~~~l~~~ 181 (563)
T KOG1263|consen 109 GENFTYRFTVKDQIG-TLWYHSHVSWQRA-----TGVFGALIINPRPG-LPVPFPKPDKEFTILLGDWYKNLNHKNLKNF 181 (563)
T ss_pred CCeEEEEEEeCCcce-eEEEeeccccccc-----cCceeEEEEcCCcc-CCCCCCCCCceeEEEeEeeccccCHHHHHHh
Confidence 999999999997778 9999998764322 11333333321110 0011221100000 011110 00111100
Q ss_pred cccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCC
Q 007633 349 VSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428 (595)
Q Consensus 349 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~ 428 (595)
+......|.+ . ....+||.+ +..
T Consensus 182 ~~~~~~~p~~------------------------~---D~~~iNg~~------------------------------g~~ 204 (563)
T KOG1263|consen 182 LDRTGALPNP------------------------S---DGVLINGRS------------------------------GFL 204 (563)
T ss_pred hccCCCCCCC------------------------C---CceEECCCC------------------------------Ccc
Confidence 0000000000 0 012334332 122
Q ss_pred ccceeEEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE
Q 007633 429 KVDTSLINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 429 ~~~~~v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
+.|...+++..|+.+.|.|.|.+- ..+ |.+-||...||..+ |.+. .|.--|++.|.+|....+..+
T Consensus 205 ~~~~~~l~v~pGktY~lRiiN~g~~~~l~-F~I~~H~ltvVe~D-g~y~----------~p~~~~~l~i~~GQ~~~vLvt 272 (563)
T KOG1263|consen 205 YNCTPTLTVEPGKTYRLRIINAGLNTSLN-FSIANHQLTVVEVD-GAYT----------KPFTTDSLDIHPGQTYSVLLT 272 (563)
T ss_pred cCceeEEEEcCCCEEEEEEEccccccceE-EEECCeEEEEEEec-ceEE----------eeeeeceEEEcCCcEEEEEEe
Confidence 334677889999999999999863 334 99999999999985 3332 245579999999999999999
Q ss_pred ecC-cce-eEEee
Q 007633 507 LDN-AGI-WNLRA 517 (595)
Q Consensus 507 adN-PG~-W~~HC 517 (595)
+|. |+. |+-=|
T Consensus 273 adq~~~~Y~i~~~ 285 (563)
T KOG1263|consen 273 ADQSPGDYYIAAS 285 (563)
T ss_pred CCCCCCcEEEEEE
Confidence 986 453 44433
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.6e-06 Score=69.63 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=54.2
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC------C-CCCccCCCCeEEEEEEECCceeeeEEccC
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL------G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPS 133 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~------~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 133 (595)
-+.|.+++||+| ++.|....++++.+=-- .+..|.. . ....+.||+++++.|+ ++|+|.|+|.
T Consensus 16 P~~i~V~~G~tV--~~~n~~~~~Hnv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G~y~y~C~ 85 (99)
T PF00127_consen 16 PSEITVKAGDTV--TFVNNDSMPHNVVFVAD-----GMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPGTYEYYCT 85 (99)
T ss_dssp SSEEEEETTEEE--EEEEESSSSBEEEEETT-----SSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSEEEEEEET
T ss_pred CCEEEECCCCEE--EEEECCCCCceEEEecc-----cccccccccccCccccceecCCCCEEEEEeC---CCeEEEEEcC
Confidence 479999999985 56676556666654221 1111110 0 1134789999999997 6999999999
Q ss_pred cchhhhcCceeeEEEe
Q 007633 134 LDFQRAAGGYGGIIIN 149 (595)
Q Consensus 134 ~~~q~~~Gl~G~liV~ 149 (595)
- |..+||.|.|+|+
T Consensus 86 -P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 86 -P-HYEAGMVGTIIVE 99 (99)
T ss_dssp -T-TGGTTSEEEEEEE
T ss_pred -C-CcccCCEEEEEEC
Confidence 4 8889999999995
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.5e-05 Score=85.61 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=68.2
Q ss_pred ecCCCeeE--EEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEE
Q 007633 43 ASPLGDKQ--QVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQ 120 (595)
Q Consensus 43 ~~~~G~~~--~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~ 120 (595)
+..+|... .+.+..-.|=-+.|+|++||+|.++++|.-...=.+ ||...... |+ +.-+.||++.+..|+
T Consensus 534 v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi--HGF~Ip~~----nI---~~dv~PG~t~svtF~ 604 (635)
T PRK02888 534 VIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT--HGFAIPNY----GV---NMEVAPQATASVTFT 604 (635)
T ss_pred eEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc--cceeeccc----Cc---cEEEcCCceEEEEEE
Confidence 45566544 455666677667899999999999999952211111 44433110 11 245789999999999
Q ss_pred ECCceeeeEEccCc---chhhhcCceeeEEEecc
Q 007633 121 VKDQIGSFFYFPSL---DFQRAAGGYGGIIINNR 151 (595)
Q Consensus 121 ~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~ 151 (595)
+ +++|+|||||.. ..|. +|.|.|+|+++
T Consensus 605 a-dkPGvy~~~CtefCGa~H~--~M~G~~iVep~ 635 (635)
T PRK02888 605 A-DKPGVYWYYCTWFCHALHM--EMRGRMLVEPK 635 (635)
T ss_pred c-CCCEEEEEECCcccccCcc--cceEEEEEEeC
Confidence 9 799999999985 2443 89999999874
|
|
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.8e-05 Score=70.71 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=76.1
Q ss_pred eeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-
Q 007633 432 TSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN- 509 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN- 509 (595)
..++.++.|+++.|.|.|.+.. .+.||++||+|+|++.++... .|...|++.|.+|+...+.++++.
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~v-----------~p~~~~~l~l~~G~R~dvlv~~~~~ 127 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAADGVPV-----------EPYKVDTLVLAPGQRYDVLVTADQP 127 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEEE-----------EEEEESBEEE-TTEEEEEEEEECSC
T ss_pred cceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeeccccc-----------cccccceEEeeCCeEEEEEEEeCCC
Confidence 3567899999999999998764 699999999999999964322 266789999999999999999987
Q ss_pred cceeEEee----ccccceeccceEEEEEe
Q 007633 510 AGIWNLRA----ENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 510 PG~W~~HC----Hil~H~~~GM~~~~~V~ 534 (595)
+|.|.++| +...+...|+.+.+.+.
T Consensus 128 ~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y 156 (159)
T PF00394_consen 128 PGNYWIRASYQHDSINDPQNGNALAILRY 156 (159)
T ss_dssp SSEEEEEEEESSSSSHSHGGGTTEEEEEE
T ss_pred CCeEEEEEecccCCCccCCCcEEEEEEEE
Confidence 99999999 55667788888876654
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00023 Score=65.20 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=72.0
Q ss_pred EEEEEcCCCCC-CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCC-------CCCCCCC----CCC------CccCCC
Q 007633 51 QVIGINGQFPG-PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN-------SWQDGVL----GTN------CPIPAG 112 (595)
Q Consensus 51 ~~~~~Ng~~Pg-P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~-------~~~DGv~----~tq------~~I~PG 112 (595)
+.+-|||+..| |+|.+..|-+|.|+|+|.-..+|++-. -+..+ ...||.. |.+ .-|.+|
T Consensus 73 ~~fNfnGts~G~mtIyiPaGw~V~V~f~N~e~~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~G 149 (195)
T TIGR03094 73 YPFNFNGTSYGAMTIYLPAGWNVYVTFTNYESLPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSG 149 (195)
T ss_pred ccccccCccCCceEEEEeCCCEEEEEEEcCCCCCccEEE---ecCCCCCCCccccccCceeEeecccccCcccccccccc
Confidence 34677888776 799999999999999999777765543 12222 3457753 322 225577
Q ss_pred CeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccC
Q 007633 113 WNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 113 ~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 152 (595)
++..=.|.. -++|+|||-|-...|..+||+|-+||.+.-
T Consensus 150 qs~sg~~~~-~~~G~YwlvCgipGHAesGMw~~lIVSs~v 188 (195)
T TIGR03094 150 HSRSGWWND-TSAGKYWLVCGITGHAESGMWAVVIVSSNV 188 (195)
T ss_pred ceeEEEecc-CCCeeEEEEcccCChhhcCcEEEEEEecCc
Confidence 775544554 589999999999999999999999998754
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.86 E-value=9.8e-05 Score=60.56 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=51.3
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|. +.|....+++++.+........+ ....+.||+++++.| +++|+|-|||-...
T Consensus 10 P~~i~v~~GdtVt--~~N~d~~~Hnv~~~~g~~~~~~~------~~~~~~~g~~~~~tf---~~~G~y~y~C~~Hp---- 74 (83)
T TIGR02657 10 TPELHVKVGDTVT--WINREAMPHNVHFVAGVLGEAAL------KGPMMKKEQAYSLTF---TEAGTYDYHCTPHP---- 74 (83)
T ss_pred CCEEEECCCCEEE--EEECCCCCccEEecCCCCccccc------cccccCCCCEEEEEC---CCCEEEEEEcCCCC----
Confidence 4789999999974 67887778888765431100001 112357788888776 46999999997543
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
+|.|.++|+
T Consensus 75 ~M~G~v~V~ 83 (83)
T TIGR02657 75 FMRGKVVVE 83 (83)
T ss_pred CCeEEEEEC
Confidence 599999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00032 Score=65.71 Aligned_cols=101 Identities=21% Similarity=0.301 Sum_probs=74.1
Q ss_pred EEEEEcCCCCC-CeEEeecCCEEEEEEEECCCCCcee--eeCCccC--CCCCCCCCCC----C------CCCccCCCCeE
Q 007633 51 QVIGINGQFPG-PILNVTTNWNVVVNVKNDLDEPLLL--TWNGVQH--RKNSWQDGVL----G------TNCPIPAGWNW 115 (595)
Q Consensus 51 ~~~~~Ng~~Pg-P~I~v~~Gd~v~v~v~N~l~~~~~i--H~HG~~~--~~~~~~DGv~----~------tq~~I~PG~~~ 115 (595)
..+-|||..-| ++|.+..|.+|.|+|+|.-..+|++ ---+..+ ......||.. | +...|.+|++.
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~ 153 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSA 153 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCcee
Confidence 36778887654 7999999999999999986555442 2222221 1234566632 2 12358899999
Q ss_pred EEEEEECCceeeeEEccCcchhhhcCceeeEEEeccC
Q 007633 116 TYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 152 (595)
.-.|.. -++|.|||=|-...|..+||++-|+|.+.-
T Consensus 154 ~~~~~~-l~aG~YwlvC~ipGHA~sGMw~~LiVs~~v 189 (196)
T PF06525_consen 154 SGVYND-LPAGYYWLVCGIPGHAESGMWGVLIVSSNV 189 (196)
T ss_pred eEEEcc-CCCceEEEEccCCChhhcCCEEEEEEecCc
Confidence 877765 369999999999999999999999999754
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00041 Score=63.32 Aligned_cols=88 Identities=16% Similarity=0.055 Sum_probs=56.8
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEE--EEEEeCCccCCCCCCCCCCCCCCcccEEEeCC---C--cEEEEE
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFF--VVGMDFGVWTENSRGTYNKWDGVARSTTQVFP---G--AWTAIL 504 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~--Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p---~--g~~~ir 504 (595)
+.+.++.|+.|.+++.|.+. ..|.|-||.+.-. ......|. +.....-.+++ + ++..+.
T Consensus 52 P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~-------------~~~~~~~i~p~~~~g~~~~~~~t 118 (148)
T TIGR03095 52 PTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGL-------------GFVAGTGFLPPPKSGKFGYTDFT 118 (148)
T ss_pred CEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCC-------------CccccCcccCCCCCCccceeEEE
Confidence 35678999999999999865 4566655532210 00000000 11111112222 2 246888
Q ss_pred EEecCcceeEEeeccccceeccceEEEEE
Q 007633 505 VYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 505 f~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
|+++.+|.+.||||+..|...||-..+.|
T Consensus 119 f~f~~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 119 YHFSTAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred EECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence 99999999999999999999999998876
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00057 Score=59.55 Aligned_cols=76 Identities=9% Similarity=0.011 Sum_probs=50.3
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeee-CCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTW-NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA 139 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~-HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 139 (595)
...|.|++||+|+....|. ++++.+ .+. ..+|... ..-.+|+++++.| +++|+|=|+|- .|..
T Consensus 14 P~~v~V~~GdTV~f~n~d~---~Hnv~~~~~~------~p~g~~~--~~s~~g~~~~~tF---~~~G~Y~Y~C~--pH~~ 77 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK---GHNVETIKGM------IPEGAEA--FKSKINEEYTVTV---TEEGVYGVKCT--PHYG 77 (116)
T ss_pred CCEEEECCCCEEEEEECCC---CeeEEEccCC------CcCCccc--ccCCCCCEEEEEe---CCCEEEEEEcC--CCcc
Confidence 4689999999977666654 455543 221 1122211 1113466665555 47999999998 6778
Q ss_pred cCceeeEEEeccC
Q 007633 140 AGGYGGIIINNRD 152 (595)
Q Consensus 140 ~Gl~G~liV~~~~ 152 (595)
.||.|.|+|.+++
T Consensus 78 ~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 78 MGMVALIQVGDPP 90 (116)
T ss_pred CCCEEEEEECCCC
Confidence 8999999998853
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00071 Score=60.01 Aligned_cols=61 Identities=13% Similarity=0.230 Sum_probs=51.2
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|+|.+.|.++..|.+-++++.+ ...++||....++|.++-||.
T Consensus 61 ~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---------------------------s~~I~pGet~TitF~adKpG~ 113 (135)
T TIGR03096 61 EALVVKKGTPVKVTVENKSPISEGFSIDAYGI---------------------------SEVIKAGETKTISFKADKAGA 113 (135)
T ss_pred CEEEECCCCEEEEEEEeCCCCccceEECCCCc---------------------------ceEECCCCeEEEEEECCCCEE
Confidence 35689999999999999988888777766532 136789999999999999999
Q ss_pred eEEeeccc
Q 007633 513 WNLRAENL 520 (595)
Q Consensus 513 W~~HCHil 520 (595)
|.|||-..
T Consensus 114 Y~y~C~~H 121 (135)
T TIGR03096 114 FTIWCQLH 121 (135)
T ss_pred EEEeCCCC
Confidence 99999983
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00093 Score=56.74 Aligned_cols=83 Identities=17% Similarity=0.097 Sum_probs=58.0
Q ss_pred eeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 432 TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
...+.++.|+.|.|+ |.+...|.+.++...+.. +... .......+++.+.||....+.|.. ||
T Consensus 16 P~~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~~pG~t~~~tF~~--~G 78 (99)
T TIGR02656 16 PAKISIAAGDTVEWV--NNKGGPHNVVFDEDAVPA-----GVKE--------LAKSLSHKDLLNSPGESYEVTFST--PG 78 (99)
T ss_pred CCEEEECCCCEEEEE--ECCCCCceEEECCCCCcc-----chhh--------hcccccccccccCCCCEEEEEeCC--CE
Confidence 346788999999886 666677888776543211 1000 001123466788899988776664 99
Q ss_pred eeEEeeccccceeccceEEEEE
Q 007633 512 IWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.|||- .|..+||...+.|
T Consensus 79 ~y~y~C~--~H~~aGM~G~I~V 98 (99)
T TIGR02656 79 TYTFYCE--PHRGAGMVGKITV 98 (99)
T ss_pred EEEEEcC--CccccCCEEEEEE
Confidence 9999998 5999999999887
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0011 Score=58.26 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=52.5
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
-.|+|++||+ |++.|.-...++++.-+.- .+ +|.- ...-.+|+++++.|. ++|+|-|+|-. |+.+|
T Consensus 54 A~v~v~pGDT--Vtw~~~d~~~Hnv~~~~~~---~~--~g~~--~~~~~~~~s~~~Tfe---~~G~Y~Y~C~P--H~~~g 119 (128)
T COG3794 54 AEVTVKPGDT--VTWVNTDSVGHNVTAVGGM---DP--EGSG--TLKAGINESFTHTFE---TPGEYTYYCTP--HPGMG 119 (128)
T ss_pred cEEEECCCCE--EEEEECCCCCceEEEeCCC---Cc--cccc--ccccCCCcceEEEec---ccceEEEEecc--CCCCC
Confidence 3899999999 6788987778888765552 11 2221 123344466666664 59999999964 56679
Q ss_pred ceeeEEEec
Q 007633 142 GYGGIIINN 150 (595)
Q Consensus 142 l~G~liV~~ 150 (595)
|.|.|+|.+
T Consensus 120 M~G~IvV~~ 128 (128)
T COG3794 120 MKGKIVVGE 128 (128)
T ss_pred cEEEEEeCC
Confidence 999999974
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0023 Score=55.62 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=50.5
Q ss_pred CCeEEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhh
Q 007633 61 GPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA 139 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 139 (595)
-+.|.|++||+|. ++|+. ..++++..-+ ...+.-+ .....||++|+|.|. ++|+|=|+|- .|..
T Consensus 41 P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~f~s~----~~~~~~G~t~s~Tf~---~~G~Y~Y~C~--pH~~ 105 (115)
T TIGR03102 41 PPAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGDLDES----ERVSEEGTTYEHTFE---EPGIYLYVCV--PHEA 105 (115)
T ss_pred CCEEEECCCCEEE--EEECCCCCCEEEEECC----CCCcccc----ccccCCCCEEEEEec---CCcEEEEEcc--CCCC
Confidence 4689999999965 77554 4666665311 0011101 123578999999993 6999999997 4566
Q ss_pred cCceeeEEEe
Q 007633 140 AGGYGGIIIN 149 (595)
Q Consensus 140 ~Gl~G~liV~ 149 (595)
.||.|.|+|+
T Consensus 106 ~gM~G~I~V~ 115 (115)
T TIGR03102 106 LGMKGAVVVE 115 (115)
T ss_pred CCCEEEEEEC
Confidence 7999999984
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.004 Score=53.31 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=44.7
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.+.+.+.|.+...|-|.+.+..+ ...+.||+...+.|.++.||.
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~---------------------------~~~l~~g~~~~~~f~~~~~G~ 87 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDLGI---------------------------SKVLPPGETATVTFTPLKPGE 87 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGGTE---------------------------EEEE-TT-EEEEEEEE-S-EE
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCCce---------------------------EEEECCCCEEEEEEcCCCCEE
Confidence 46788999999999999988877777766222 247889999999999999999
Q ss_pred eEEeecccccee
Q 007633 513 WNLRAENLDTWY 524 (595)
Q Consensus 513 W~~HCHil~H~~ 524 (595)
|-|+|-+ |.+
T Consensus 88 y~~~C~~--~~~ 97 (104)
T PF13473_consen 88 YEFYCTM--HPN 97 (104)
T ss_dssp EEEB-SS--S-T
T ss_pred EEEEcCC--CCc
Confidence 9999997 554
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.017 Score=63.92 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=59.1
Q ss_pred eEEecCCCcEEEEEEEcCC---CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 433 SLINGTYKGFMEIIFQNND---TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
..+.++.|+.|.+++.|.+ +..|.|-+-++... ..+.||....+.|++|.
T Consensus 555 ~~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI~---------------------------~dv~PG~t~svtF~adk 607 (635)
T PRK02888 555 REFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGVN---------------------------MEVAPQATASVTFTADK 607 (635)
T ss_pred ceEEecCCCEEEEEEEeCCcccccccceeecccCcc---------------------------EEEcCCceEEEEEEcCC
Confidence 4577899999999999974 45688877544321 25678999999999999
Q ss_pred cceeEEeeccccce-eccceEEEEEec
Q 007633 510 AGIWNLRAENLDTW-YLGQEVYVNVIN 535 (595)
Q Consensus 510 PG~W~~HCHil~H~-~~GM~~~~~V~~ 535 (595)
||+|.+||...-|. |.+|...+.|.+
T Consensus 608 PGvy~~~CtefCGa~H~~M~G~~iVep 634 (635)
T PRK02888 608 PGVYWYYCTWFCHALHMEMRGRMLVEP 634 (635)
T ss_pred CEEEEEECCcccccCcccceEEEEEEe
Confidence 99999999974333 568888888753
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.094 Score=44.38 Aligned_cols=82 Identities=11% Similarity=0.055 Sum_probs=54.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCC-CCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENS-RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
..+.++.|+.|.|+.. +...|.+++=- +.+.... ...... .-.+..+.+|....+.|. .||
T Consensus 17 ~~i~V~~G~tV~~~n~--~~~~Hnv~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~G~~~~~tF~--~~G 78 (99)
T PF00127_consen 17 SEITVKAGDTVTFVNN--DSMPHNVVFVA----------DGMPAGADSDYVPP----GDSSPLLAPGETYSVTFT--KPG 78 (99)
T ss_dssp SEEEEETTEEEEEEEE--SSSSBEEEEET----------TSSHTTGGHCHHST----TCEEEEBSTTEEEEEEEE--SSE
T ss_pred CEEEECCCCEEEEEEC--CCCCceEEEec----------ccccccccccccCc----cccceecCCCCEEEEEeC--CCe
Confidence 4678899999988766 45557665532 1111000 000111 115667778888777766 999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|+|- - |..+||-..+.|.
T Consensus 79 ~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 79 TYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp EEEEEET-T-TGGTTSEEEEEEE
T ss_pred EEEEEcC-C-CcccCCEEEEEEC
Confidence 9999999 4 9999999988873
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.056 Score=47.49 Aligned_cols=71 Identities=15% Similarity=0.084 Sum_probs=49.8
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.++++.|+.|+|+ |.+...|.+.+.+..+ +. .+| ..+.||....+.|.. ||.+
T Consensus 48 ~i~v~~Gd~V~~~--N~~~~~H~v~~~~~~~---------~~-------------~~~-~~~~pg~t~~~tF~~--~G~y 100 (119)
T PRK02710 48 TLTIKAGDTVKWV--NNKLAPHNAVFDGAKE---------LS-------------HKD-LAFAPGESWEETFSE--AGTY 100 (119)
T ss_pred EEEEcCCCEEEEE--ECCCCCceEEecCCcc---------cc-------------ccc-cccCCCCEEEEEecC--CEEE
Confidence 4678899998875 6667778876543211 00 011 245677776666654 9999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|- .|..+||-..+.|
T Consensus 101 ~y~C~--~H~~~gM~G~I~V 118 (119)
T PRK02710 101 TYYCE--PHRGAGMVGKITV 118 (119)
T ss_pred EEEcC--CCccCCcEEEEEE
Confidence 99998 4888999998887
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.13 Score=44.83 Aligned_cols=77 Identities=8% Similarity=0.137 Sum_probs=49.1
Q ss_pred eeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 432 TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
...+.++.|++|.|+..+.+ |... .+.... +... +.+.-.++.. +.++++.||
T Consensus 14 P~~v~V~~GdTV~f~n~d~~---Hnv~---------~~~~~~--p~g~-----------~~~~s~~g~~--~~~tF~~~G 66 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDKG---HNVE---------TIKGMI--PEGA-----------EAFKSKINEE--YTVTVTEEG 66 (116)
T ss_pred CCEEEECCCCEEEEEECCCC---eeEE---------EccCCC--cCCc-----------ccccCCCCCE--EEEEeCCCE
Confidence 34678999999999988752 4321 111000 0000 0011123444 455567899
Q ss_pred eeEEeeccccceeccceEEEEEecCC
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
.+-|+|-. |..+||-..+.|.++.
T Consensus 67 ~Y~Y~C~p--H~~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 67 VYGVKCTP--HYGMGMVALIQVGDPP 90 (116)
T ss_pred EEEEEcCC--CccCCCEEEEEECCCC
Confidence 99999996 9999999999998764
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.32 Score=42.73 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=51.6
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc-hhhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD-FQRA 139 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 139 (595)
.+.|.+..|+.|++++++. +.-+++...++.. +.-+-||+.....|++ +++|+|++.|..= ..-.
T Consensus 45 ~~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~------------k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~gH 110 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE-DVIHSFWIPELGI------------KMDAIPGRTNSVTFTP-DKPGTYYGQCAEYCGAGH 110 (120)
T ss_dssp SSEEEEETTSEEEEEEEES-SS-EEEEETTCTE------------EEEEBTTCEEEEEEEE-SSSEEEEEEE-SSSSTTG
T ss_pred cceecccccceEeEEEEcC-CccccccccccCc------------ccccccccceeeeeee-ccCCcEEEcCccccCcCc
Confidence 4789999999999999995 5555555444422 2446799999999999 6899999999831 1112
Q ss_pred cCceeeEEE
Q 007633 140 AGGYGGIII 148 (595)
Q Consensus 140 ~Gl~G~liV 148 (595)
.-|.|-++|
T Consensus 111 ~~M~~~v~V 119 (120)
T PF00116_consen 111 SFMPGKVIV 119 (120)
T ss_dssp GG-EEEEEE
T ss_pred CCCeEEEEE
Confidence 246777665
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.79 Score=43.35 Aligned_cols=105 Identities=22% Similarity=0.175 Sum_probs=68.7
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC-----ceeEEeecCccee-----ee
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH-----NLLLVETEGSYTV-----QQ 263 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh-----~~~via~DG~~~~-----p~ 263 (595)
+.+-+||... ....+-|.+|-++.++++|.+.. .|+|-+--. ....++.||..+. +.
T Consensus 74 ~~~nfnGts~------------G~m~i~VPAGw~V~i~f~N~~~l-~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~ 140 (196)
T PF06525_consen 74 NPFNFNGTSN------------GQMTIYVPAGWNVQITFTNQESL-PHNLVIVQNDTPTPNNPPISSDGKILLYVGASPG 140 (196)
T ss_pred CceeeecccC------------CcEEEEEcCCCEEEEEEEcCCCC-CeeEEEEeCCCCCCCccccCCCCceeeeccCCCC
Confidence 4677888775 34889999999999999998764 666666321 2235677776552 12
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
....--|.+||+++..+... ++| .||+.+.-..... ....+.|....+
T Consensus 141 ~~~~~GI~~G~s~~~~~~~l-~aG-~YwlvC~ipGHA~-----sGMw~~LiVs~~ 188 (196)
T PF06525_consen 141 NYTSNGISSGQSASGVYNDL-PAG-YYWLVCGIPGHAE-----SGMWGVLIVSSN 188 (196)
T ss_pred ccccCCccCCceeeEEEccC-CCc-eEEEEccCCChhh-----cCCEEEEEEecC
Confidence 22334567999998777533 578 9999886544332 234455555443
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.28 Score=39.98 Aligned_cols=72 Identities=10% Similarity=-0.003 Sum_probs=45.2
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.+..|+.|.| .|.+...|..+.+...+ +..+ ++. -.+.++... ++.++.||.
T Consensus 11 ~~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~~-------------~~~-~~~~~g~~~--~~tf~~~G~ 65 (83)
T TIGR02657 11 PELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEAA-------------LKG-PMMKKEQAY--SLTFTEAGT 65 (83)
T ss_pred CEEEECCCCEEEE--EECCCCCccEEecCCCC-------cccc-------------ccc-cccCCCCEE--EEECCCCEE
Confidence 3567889999987 57767778888653221 0000 011 123344444 456688999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||=+ |- .|...+.|
T Consensus 66 y~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 66 YDYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred EEEEcCC--CC--CCeEEEEE
Confidence 9999998 43 47777766
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.71 Score=40.55 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=55.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|.+.+.+. +..|.|.+-+.... +.+.||....+.|.++.||.
T Consensus 46 ~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~k---------------------------~d~~PG~~~~~~~~~~~~G~ 97 (120)
T PF00116_consen 46 NELVLPAGQPVRFHLTSE-DVIHSFWIPELGIK---------------------------MDAIPGRTNSVTFTPDKPGT 97 (120)
T ss_dssp SEEEEETTSEEEEEEEES-SS-EEEEETTCTEE---------------------------EEEBTTCEEEEEEEESSSEE
T ss_pred ceecccccceEeEEEEcC-CccccccccccCcc---------------------------cccccccceeeeeeeccCCc
Confidence 457889999999999996 56788888655442 25678999999999999999
Q ss_pred eEEeeccccc-eeccceEEEEEe
Q 007633 513 WNLRAENLDT-WYLGQEVYVNVI 534 (595)
Q Consensus 513 W~~HCHil~H-~~~GM~~~~~V~ 534 (595)
+-..|...=. -|.-|...++|+
T Consensus 98 y~~~C~e~CG~gH~~M~~~v~VV 120 (120)
T PF00116_consen 98 YYGQCAEYCGAGHSFMPGKVIVV 120 (120)
T ss_dssp EEEEE-SSSSTTGGG-EEEEEEE
T ss_pred EEEcCccccCcCcCCCeEEEEEC
Confidence 9999997543 356666677764
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.28 Score=44.36 Aligned_cols=93 Identities=13% Similarity=0.122 Sum_probs=66.3
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+++..++.|.....|=|=+- ++.... +.|.-... ..-..--...++.|.||....+.+.+.++|.+-
T Consensus 65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~--~~~~~~~~--~~Dme~d~~~~v~L~PG~s~elvv~ft~~g~ye 137 (158)
T COG4454 65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNL--EHVTHMIL--ADDMEHDDPNTVTLAPGKSGELVVVFTGAGKYE 137 (158)
T ss_pred ccccCCcEEeeeecCcccceEEEecc---Cccccc--hhHHHhhh--CCccccCCcceeEeCCCCcEEEEEEecCCccEE
Confidence 46788999999999998887876665 211111 11110000 000001235689999999999999999999999
Q ss_pred EeeccccceeccceEEEEEe
Q 007633 515 LRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 515 ~HCHil~H~~~GM~~~~~V~ 534 (595)
|-|-|-.|-+.||-..++|-
T Consensus 138 ~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 138 FACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred EEecCCCcccCCcEEEEEeC
Confidence 99999999999999988874
|
|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.38 Score=42.05 Aligned_cols=87 Identities=20% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCeEEeecC-CEEEEEEEECCCCCceeeeC----------------Cc----cCCCCCCCC-CCCCCCCccCCCCeEEEE
Q 007633 61 GPILNVTTN-WNVVVNVKNDLDEPLLLTWN----------------GV----QHRKNSWQD-GVLGTNCPIPAGWNWTYQ 118 (595)
Q Consensus 61 gP~I~v~~G-d~v~v~v~N~l~~~~~iH~H----------------G~----~~~~~~~~D-Gv~~tq~~I~PG~~~~Y~ 118 (595)
=..|.|..+ ..|.|+|+|....+...--| |+ ....-+..| -|.....-|.|||+.+..
T Consensus 15 ~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~svt 94 (125)
T TIGR02695 15 TKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSVT 94 (125)
T ss_pred ccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEEE
Confidence 358899984 78999999985433222222 11 110011111 111122448999999999
Q ss_pred EEECC-ceee-eEEccCcchhhhcCceeeEEE
Q 007633 119 FQVKD-QIGS-FFYFPSLDFQRAAGGYGGIII 148 (595)
Q Consensus 119 f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV 148 (595)
|+++. ++|+ |-|.|....|.+ .|.|.|.+
T Consensus 95 F~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~l 125 (125)
T TIGR02695 95 FDVSKLSAGEDYTFFCSFPGHWA-MMRGTVKL 125 (125)
T ss_pred EECCCCCCCCcceEEEcCCCcHH-hceEEEeC
Confidence 99963 5886 999999988886 69998753
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=92.80 E-value=1.2 Score=46.82 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=54.8
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC--CCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL--GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~--~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
.+--..+.|+.|+ +.+.|+|....++.+-.- +|+. +....|.||.+.++.++. .+|+|-|+|-
T Consensus 40 ~c~p~~~tVpAG~-~~f~V~N~~~~~~Efe~~----------~~~~vv~e~EnIaPG~s~~l~~~L--~pGtY~~~C~-- 104 (375)
T PRK10378 40 QCEPMTLTVNAGK-TQFIIQNHSQKALEWEIL----------KGVMVVEERENIAPGFSQKMTANL--QPGEYDMTCG-- 104 (375)
T ss_pred ccccCceeeCCCC-EEEEEEeCCCCcceEEee----------ccccccccccccCCCCceEEEEec--CCceEEeecC--
Confidence 4444689999996 899999997766443111 2221 122479999999988777 4999999993
Q ss_pred hhhhcCceeeEEEeccC
Q 007633 136 FQRAAGGYGGIIINNRD 152 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~~~ 152 (595)
.+ ..+.|.|+|....
T Consensus 105 ~~--~~~~g~l~Vtg~~ 119 (375)
T PRK10378 105 LL--TNPKGKLIVKGEA 119 (375)
T ss_pred cC--CCCCceEEEeCCC
Confidence 33 3458999998643
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=92.33 E-value=1.2 Score=38.83 Aligned_cols=73 Identities=14% Similarity=-0.032 Sum_probs=46.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+-+. +...|.... .+.+.|+.. .....+|....+.| +.||.
T Consensus 42 ~~ltV~~GdTVtw~~~~-d~~~HnV~s---------~~~~~f~s~--------------~~~~~~G~t~s~Tf--~~~G~ 95 (115)
T TIGR03102 42 PAIRVDPGTTVVWEWTG-EGGGHNVVS---------DGDGDLDES--------------ERVSEEGTTYEHTF--EEPGI 95 (115)
T ss_pred CEEEECCCCEEEEEECC-CCCCEEEEE---------CCCCCcccc--------------ccccCCCCEEEEEe--cCCcE
Confidence 35688999999986543 234565432 222233211 01224455555544 78999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
+.|+|-. |..+||-..+.|
T Consensus 96 Y~Y~C~p--H~~~gM~G~I~V 114 (115)
T TIGR03102 96 YLYVCVP--HEALGMKGAVVV 114 (115)
T ss_pred EEEEccC--CCCCCCEEEEEE
Confidence 9999997 999999998887
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.46 Score=42.99 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=66.7
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCCC--cee---------eeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDEP--LLL---------TWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~~--~~i---------H~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
.|++-.+.++.|.+++..++|.-.-- .++ --|... .+.+++-......+.||++-+..|.. .++|
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~~~~~~~~~~~~---~~Dme~d~~~~v~L~PG~s~elvv~f-t~~g 134 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPDKNLEHVTHMIL---ADDMEHDDPNTVTLAPGKSGELVVVF-TGAG 134 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCccccchhHHHhhh---CCccccCCcceeEeCCCCcEEEEEEe-cCCc
Confidence 46788999999999999999975311 111 112222 23444433334669999999999999 4899
Q ss_pred eeEEccCcchhhhcCceeeEEEec
Q 007633 127 SFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 127 t~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.|=.-|-...|+.+||.|-|.|.+
T Consensus 135 ~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 135 KYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred cEEEEecCCCcccCCcEEEEEeCC
Confidence 999999999999999999999864
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=91.19 E-value=1.9 Score=41.53 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=55.5
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRA 139 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~ 139 (595)
...|.+..|+.|++++++. +. + ||..... . | -+.-+-||..-+..|++ +++|+|...|.. -....
T Consensus 116 ~~~l~vp~g~~v~~~~ts~-DV---~--Hsf~ip~---~-~---~k~da~PG~~~~~~~~~-~~~G~y~~~c~e~cG~~h 181 (201)
T TIGR02866 116 VNELVVPAGTPVRLQVTSK-DV---I--HSFWVPE---L-G---GKIDAIPGQYNALWFNA-DEPGVYYGYCAELCGAGH 181 (201)
T ss_pred cCEEEEEcCCEEEEEEEeC-ch---h--hcccccc---c-C---ceEEecCCcEEEEEEEe-CCCEEEEEEehhhCCcCc
Confidence 3589999999999999985 22 2 4543321 1 1 13456789999999998 689999999984 12222
Q ss_pred cCceeeEEEeccC
Q 007633 140 AGGYGGIIINNRD 152 (595)
Q Consensus 140 ~Gl~G~liV~~~~ 152 (595)
+.|.+-++|.+++
T Consensus 182 ~~M~~~v~v~~~~ 194 (201)
T TIGR02866 182 SLMLFKVVVVERE 194 (201)
T ss_pred cCCeEEEEEECHH
Confidence 5699999998754
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=89.77 E-value=1.2 Score=42.86 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=57.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|++.+.+.+ ..|.|.+-+... -...-||....+.|.++.||.
T Consensus 117 ~~l~vp~g~~v~~~~ts~D-V~Hsf~ip~~~~---------------------------k~da~PG~~~~~~~~~~~~G~ 168 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD-VIHSFWVPELGG---------------------------KIDAIPGQYNALWFNADEPGV 168 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc-hhhcccccccCc---------------------------eEEecCCcEEEEEEEeCCCEE
Confidence 4567899999999999864 346665522211 134568899999999999999
Q ss_pred eEEeeccccc-eeccceEEEEEecCC
Q 007633 513 WNLRAENLDT-WYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H-~~~GM~~~~~V~~~~ 537 (595)
+...|-..-. .|..|...++|++++
T Consensus 169 y~~~c~e~cG~~h~~M~~~v~v~~~~ 194 (201)
T TIGR02866 169 YYGYCAELCGAGHSLMLFKVVVVERE 194 (201)
T ss_pred EEEEehhhCCcCccCCeEEEEEECHH
Confidence 9999997432 368888889988765
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR03079 CH4_NH3mon_ox_B methane monooxygenase/ammonia monooxygenase, subunit B | Back alignment and domain information |
|---|
Probab=87.25 E-value=4.8 Score=41.57 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=49.9
Q ss_pred EEEEEEEEEEecCCC-----eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCce--------eeeCC---ccCCCC
Q 007633 33 FYDWTISYVTASPLG-----DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL--------LTWNG---VQHRKN 96 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G-----~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~--------iH~HG---~~~~~~ 96 (595)
..-|.+....+.|.- +..++.--|=.+||-.+++ .+.++|+.+++.. ++|=. +..-.+
T Consensus 248 tIPLQag~~~i~pLp~~~~~V~~kv~~a~Y~VPGR~l~~------~~~VTN~g~~~vrlgEF~TA~vRFlN~~~v~~~~~ 321 (399)
T TIGR03079 248 TVPIQAGLSKVASLPVAPNPVSINVTKANYDVPGRALRV------TMEITNNGDQVISIGEFTTAGIRFMNANGVRVLDP 321 (399)
T ss_pred eeeccccceecccCCCCCCceEEEEeccEEecCCcEEEE------EEEEEcCCCCceEEEeEeecceEeeCcccccccCC
Confidence 334444444454432 2333444445688888864 5788888876542 33322 222222
Q ss_pred CCCC-----CCCC-CCCccCCCCeEEEEEEECC
Q 007633 97 SWQD-----GVLG-TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 97 ~~~D-----Gv~~-tq~~I~PG~~~~Y~f~~~~ 123 (595)
.+.| |... .+.||.|||+.+.+..+.|
T Consensus 322 ~yP~~lla~GL~v~d~~pI~PGETr~v~v~aqd 354 (399)
T TIGR03079 322 DYPRELLAEGLEVDDQSAIAPGETVEVKMEAKD 354 (399)
T ss_pred CChHHHhhccceeCCCCCcCCCcceEEEEEEeh
Confidence 3333 6666 5689999999999998854
|
Both ammonia oxidizers such as Nitrosomonas europaea and methanotrophs (obligate methane oxidizers) such as Methylococcus capsulatus each can grow only on their own characteristic substrate. However, both groups have the ability to oxidize both substrates, and so the relevant enzymes must be named here according to their ability to oxidze both. The protein family represented here reflects subunit B of both the particulate methane monooxygenase of methylotrophs and the ammonia monooxygenase of nitrifying bacteria. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.98 E-value=3.2 Score=41.26 Aligned_cols=78 Identities=10% Similarity=0.033 Sum_probs=58.1
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|++.+... +..|.|.+-+-.+ -+...||-...+.+.++.||+
T Consensus 137 n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~~---------------------------k~d~iPG~~~~~~~~~~~~G~ 188 (247)
T COG1622 137 NELVLPVGRPVRFKLTSA-DVIHSFWIPQLGG---------------------------KIDAIPGMTTELWLTANKPGT 188 (247)
T ss_pred ceEEEeCCCeEEEEEEec-hhceeEEecCCCc---------------------------eeeecCCceEEEEEecCCCeE
Confidence 456788999999999887 4457665543333 235567888899999999999
Q ss_pred eEEeeccccce-eccceEEEEEecCCC
Q 007633 513 WNLRAENLDTW-YLGQEVYVNVINPEI 538 (595)
Q Consensus 513 W~~HCHil~H~-~~GM~~~~~V~~~~~ 538 (595)
+..+|+..--. |..|-..+.|+++++
T Consensus 189 Y~g~Cae~CG~gH~~M~~~v~vvs~~~ 215 (247)
T COG1622 189 YRGICAEYCGPGHSFMRFKVIVVSQED 215 (247)
T ss_pred EEEEcHhhcCCCcccceEEEEEEcHHH
Confidence 99999986654 556666788887764
|
|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=84.15 E-value=6.4 Score=34.55 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=54.2
Q ss_pred CceeEEEecC-cEEEEEEEEeCCCc----eeeEEEe-CCceeEEe-------ecCcceee----eeeeEEEEeccceEEE
Q 007633 216 PYQLINVEPG-KTYRLRVHNVGIST----SLNFRIQ-NHNLLLVE-------TEGSYTVQ----QNYTNMDIHVGQSFSF 278 (595)
Q Consensus 216 ~~~~l~v~~G-~~~rlRliNag~~~----~~~~~i~-gh~~~via-------~DG~~~~p----~~~d~l~i~pGqR~dv 278 (595)
+...|+|.++ +.+.+.|-|.|... .|++-|- .-.+.-|+ .|-.|+++ +...+=.|++||+.+|
T Consensus 14 d~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~sv 93 (125)
T TIGR02695 14 NTKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSV 93 (125)
T ss_pred cccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEE
Confidence 4578999985 88999999998643 3444331 11222222 34566643 2456788999999999
Q ss_pred EEEeCC-CCCcceEEEEee
Q 007633 279 LVTTDQ-NASSDYYIVASP 296 (595)
Q Consensus 279 lv~~~~-~~g~~y~i~a~~ 296 (595)
.++++. .+|.+|...++-
T Consensus 94 tF~~~~l~~g~~Y~f~CSF 112 (125)
T TIGR02695 94 TFDVSKLSAGEDYTFFCSF 112 (125)
T ss_pred EEECCCCCCCCcceEEEcC
Confidence 999864 355479887754
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.44 E-value=6.2 Score=39.26 Aligned_cols=78 Identities=8% Similarity=-0.089 Sum_probs=59.8
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhhc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRAA 140 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 140 (595)
..|.+..|..|+++++-. |.-+++...++.. +.-.-||...+..+++ +++|+|.-+|+. ......
T Consensus 137 n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~~------------k~d~iPG~~~~~~~~~-~~~G~Y~g~Cae~CG~gH~ 202 (247)
T COG1622 137 NELVLPVGRPVRFKLTSA-DVIHSFWIPQLGG------------KIDAIPGMTTELWLTA-NKPGTYRGICAEYCGPGHS 202 (247)
T ss_pred ceEEEeCCCeEEEEEEec-hhceeEEecCCCc------------eeeecCCceEEEEEec-CCCeEEEEEcHhhcCCCcc
Confidence 899999999999999877 5555554444421 3446789999999998 789999999993 345556
Q ss_pred CceeeEEEeccCC
Q 007633 141 GGYGGIIINNRDV 153 (595)
Q Consensus 141 Gl~G~liV~~~~~ 153 (595)
.|.|.++|.++++
T Consensus 203 ~M~~~v~vvs~~~ 215 (247)
T COG1622 203 FMRFKVIVVSQED 215 (247)
T ss_pred cceEEEEEEcHHH
Confidence 7999999998753
|
|
| >COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.33 E-value=2.1 Score=45.33 Aligned_cols=77 Identities=19% Similarity=0.154 Sum_probs=50.5
Q ss_pred eEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc-hhhhcC
Q 007633 63 ILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD-FQRAAG 141 (595)
Q Consensus 63 ~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~~G 141 (595)
+..|++||.|.+.++|--.....+| |.-.. +-|+ ...+.|-++-.|.|.+ +.+|.+||.|.-. .-..+-
T Consensus 559 ef~Vkq~DEVt~l~tnld~Ved~th--gfv~p----~~~v---~~~v~pq~tasvtf~a-~kpgv~w~ycs~fchalh~e 628 (637)
T COG4263 559 EFKVKQGDEVTVLTTNLDEVEDLTH--GFVIP----NYGV---NMEVKPQRTASVTFYA-DKPGVAWYYCSWFCHALHME 628 (637)
T ss_pred EEEEecCcEEEEEecccceeccccc--eeeec----cCce---EEEEccCCceEEEEEc-cCCeeeehhhhhHHHHHHHh
Confidence 6778888888888888654444443 32111 1122 2457888999999999 6899999998643 222234
Q ss_pred ceeeEEEe
Q 007633 142 GYGGIIIN 149 (595)
Q Consensus 142 l~G~liV~ 149 (595)
|.|-++|+
T Consensus 629 m~~rmlve 636 (637)
T COG4263 629 MAGRMLVE 636 (637)
T ss_pred hccceeec
Confidence 67777776
|
|
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.09 E-value=9.5 Score=33.82 Aligned_cols=74 Identities=8% Similarity=-0.094 Sum_probs=44.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+- .+...|..+.=+-. .+ ..-+++..-++.... ..++-||.
T Consensus 54 A~v~v~pGDTVtw~~--~d~~~Hnv~~~~~~---------~~-------------~g~~~~~~~~~~s~~--~Tfe~~G~ 107 (128)
T COG3794 54 AEVTVKPGDTVTWVN--TDSVGHNVTAVGGM---------DP-------------EGSGTLKAGINESFT--HTFETPGE 107 (128)
T ss_pred cEEEECCCCEEEEEE--CCCCCceEEEeCCC---------Cc-------------ccccccccCCCcceE--EEecccce
Confidence 356788999999864 44446665442221 11 011111222233343 44445999
Q ss_pred eEEeeccccceeccceEEEEEe
Q 007633 513 WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+.|.|-. |.-+||-..+.|.
T Consensus 108 Y~Y~C~P--H~~~gM~G~IvV~ 127 (128)
T COG3794 108 YTYYCTP--HPGMGMKGKIVVG 127 (128)
T ss_pred EEEEecc--CCCCCcEEEEEeC
Confidence 9999999 8999999988775
|
|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=80.36 E-value=15 Score=29.89 Aligned_cols=65 Identities=18% Similarity=0.324 Sum_probs=35.4
Q ss_pred EEEEEEEeCCCceeeEEEe-CCce--eEEeecCcceee--------eeeeEEEEeccceEEEEEEeCCC---CCcceEEE
Q 007633 228 YRLRVHNVGISTSLNFRIQ-NHNL--LLVETEGSYTVQ--------QNYTNMDIHVGQSFSFLVTTDQN---ASSDYYIV 293 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~-gh~~--~via~DG~~~~p--------~~~d~l~i~pGqR~dvlv~~~~~---~g~~y~i~ 293 (595)
..|++.|.+.. .+.|.+. |+.+ .|...+|..+-. +......|.|||...+-.+.+.. +| .|.+.
T Consensus 4 ~~l~v~N~s~~-~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G-~Y~~~ 81 (82)
T PF12690_consen 4 FTLTVTNNSDE-PVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPG-EYTLE 81 (82)
T ss_dssp EEEEEEE-SSS--EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SE-EEEEE
T ss_pred EEEEEEeCCCC-eEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCc-eEEEe
Confidence 46777777764 5555653 4433 344446655521 33568899999999999988865 45 88886
Q ss_pred E
Q 007633 294 A 294 (595)
Q Consensus 294 a 294 (595)
|
T Consensus 82 a 82 (82)
T PF12690_consen 82 A 82 (82)
T ss_dssp E
T ss_pred C
Confidence 4
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 595 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 3e-50 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 1e-22 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 1e-22 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 6e-22 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 5e-21 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 9e-21 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 9e-21 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 2e-20 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 3e-20 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 7e-20 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 9e-20 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 2e-19 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 4e-18 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 2e-17 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 2e-17 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 4e-17 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 5e-14 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 5e-14 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 4e-12 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 2e-11 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 1e-09 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 5e-08 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 6e-08 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 9e-08 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 3e-06 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 6e-04 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 543 bits (1401), Expect = 0.0
Identities = 149/564 (26%), Positives = 254/564 (45%), Gaps = 52/564 (9%)
Query: 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNG 90
Y W + Y+ +P ++ V+GINGQFPGP + +VVV + N L E +++ W+G
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 91 VQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149
+ R W DG + C I G + Y F V D G+FFY L QR+AG YG +I++
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 150 NRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG--VDLGVPDGILINGLGPYRYD 207
PF DG+I + +SDW+ +S K + + +G P IL+NG G +
Sbjct: 123 PPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 208 AAIVPD------------GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET 255
A D + +V P KTYR+R+ + +LNF I NH LL+VE
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 256 EGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
+G+Y +++DI+ G+S+S L+TTDQN S +Y++ R + N G+ +L+Y
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH---PNTPPGLTLLNY 298
Query: 316 SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVI 375
+ S PP + +++++ + ++A P P F + +
Sbjct: 299 LPN--SVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKF--------NRRIF 348
Query: 376 LNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMS---------- 425
L +I G + +N +S P TP + A ++N+ A+ + P ++
Sbjct: 349 LLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPT 408
Query: 426 -RAPKVDTSLINGTYKGFMEIIFQN------NDTTVQSYHMDGYAFFVVGMDFGVWTENS 478
++ + +++I QN N + +H+ G+ F+V+G G ++
Sbjct: 409 NEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE 468
Query: 479 RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538
+ N + R+T +FP WTAI DN G+W ++G V ++
Sbjct: 469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKV 528
Query: 539 DKSAPLLPDNAIYCGLLSSLQKDQ 562
+P A+ CG + +
Sbjct: 529 ----GRIPTKALACGGTAKSLINN 548
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 3e-94
Identities = 121/494 (24%), Positives = 184/494 (37%), Gaps = 62/494 (12%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT-----W 88
T++ SP G + I +NG GP++ N N +NV NDLD P +L W
Sbjct: 7 DTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHW 65
Query: 89 NGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+G+ R +W DG G CPI G + Y+F G+F+Y Q G G ++
Sbjct: 66 HGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMV 125
Query: 148 I-NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
I ++ D + D + I ++DWY ++ PD LING G Y
Sbjct: 126 IYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVG 178
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
A ++NVE GK YR+R+ ++ + F I H L ++E +G T
Sbjct: 179 GPAA-----ELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASP---RFVNSSEWNKVTGVAILHYSNSLGPAS 323
+ I GQ +SF++ +Q + Y+I A P R + + AIL Y+ G A+
Sbjct: 234 RLQIFTGQRYSFVLDANQPVDN-YWIRAQPNKGRNGLAGTFANGVNSAILRYA---GAAN 289
Query: 324 GPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
N + ++ + G P DV + L
Sbjct: 290 ADPTTSANPNPAQLNEADLHALIDPAAPGIPTPGA-----------ADVNLRFQ----LG 334
Query: 384 EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443
R T+NG +Y PS P +L A S+ +
Sbjct: 335 FSGGRFTINGTAYESPSVPTLLQIMSGAQSAN-----------DLLPAGSVYELPRNQVV 383
Query: 444 EIIFQNNDTTVQ-SYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP-GAWT 501
E++ +H+ G+AF VV TYN + V R + G
Sbjct: 384 ELVVPAGVLGGPHPFHLHGHAFSVVRS-------AGSSTYNFVNPVKRDVVSLGVTGDEV 436
Query: 502 AILVYLDNAGIWNL 515
I DN G W
Sbjct: 437 TIRFVTDNPGPWFF 450
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 5e-87
Identities = 106/492 (21%), Positives = 183/492 (37%), Gaps = 47/492 (9%)
Query: 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNG 90
Y ++ T +P G + + NG PGP + N++++V N+L + W+G
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 91 VQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149
++ + DGV G T CPI G TY+FQV Q G+ +Y Q G +G +IIN
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIIN 186
Query: 150 NRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
P + IF+ DW +S ++ G + L+NG + A+
Sbjct: 187 G----PATADYDEDVGVIFLQDWAHESVFEIWDTARLGAP-PALENTLMNGTNTFDCSAS 241
Query: 210 IVPDGI---PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
P+ + + G YRLR+ NVGI + F I NH L ++ + V
Sbjct: 242 TDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTD 301
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS--LGPASG 324
+ I +GQ + +V + A + Y+I + S+ IL Y +S P S
Sbjct: 302 TLLIGIGQRYDVIVEANAAADN-YWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSV 360
Query: 325 PLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIE 384
D + P + G ++ D V
Sbjct: 361 GTTPRGTCEDEPVA----------------SLVPHLALDVGGYSLVDEQVSSA-----FT 399
Query: 385 GKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFME 444
+ T+N S L + + FN + ++ + + + ++
Sbjct: 400 NYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVV--------- 450
Query: 445 IIFQNNDTTVQS--YHMDGYAFFVVGMDFGVWT-ENSRGTYNKWDGVARSTTQVFPGAWT 501
+ ++ H+ G+ FF+V + V+ + S +N + R + +
Sbjct: 451 YVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYL 510
Query: 502 AILVYLDNAGIW 513
AI LDN G W
Sbjct: 511 AIAFKLDNPGSW 522
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 276 bits (707), Expect = 3e-86
Identities = 109/489 (22%), Positives = 180/489 (36%), Gaps = 55/489 (11%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT-----W 88
D I P G + + G FPGP++ N + N L E +L W
Sbjct: 7 TDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHW 66
Query: 89 NGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+G + +W DG T CPI G +++Y F V G+++Y L Q G G +
Sbjct: 67 HGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFV 126
Query: 148 INN-RDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
+ + D + V D I ++DWY K++ D LI+GLG
Sbjct: 127 VYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAI-----TADSTLIDGLGRTHV 181
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
+ A +P +I VE GK YR+R+ ++ + +F I H++ ++ET+G + +
Sbjct: 182 NVA----AVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
+ I Q +SF++ +Q + Y+I A+P ++ AIL Y + + P+
Sbjct: 238 EIQIFAAQRYSFVLNANQPVGN-YWIRANPNSGGEG-FDGGINSAILRYDGA--TTADPV 293
Query: 327 PDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK 386
+ + G QG D + L+ L
Sbjct: 294 TVASTVHTKCLIETDLHPL---SRNGVPGNPHQGGA--------DCNLNLS----LGFAC 338
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEII 446
+NG+S+ PP+ P++L A L S+I+ +EI
Sbjct: 339 GNFVINGVSFTPPTVPVLLQICSGANTAADLL-----------PSGSVISLPSNSTIEIA 387
Query: 447 FQNNDTTVQ-SYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGA-WTAIL 504
+H+ G+ F V T N D + R + I
Sbjct: 388 LPAGAAGGPHPFHLHGHDFAVSESASNS-------TSNYDDPIWRDVVSIGGVGDNVTIR 440
Query: 505 VYLDNAGIW 513
DN G W
Sbjct: 441 FCTDNPGPW 449
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 273 bits (699), Expect = 1e-84
Identities = 101/509 (19%), Positives = 170/509 (33%), Gaps = 56/509 (11%)
Query: 14 FFFILLWLLNGCFGGDPYVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNV 72
++L L + D I P G + + G P++ +
Sbjct: 8 KSLVVLSLTSLSLAATVA--LDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRF 65
Query: 73 VVNVKNDLDEPLLLT-----WNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIG 126
+NV + L + + W+G + DG CPI ++ Y F V Q G
Sbjct: 66 QINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAG 125
Query: 127 SFFYFPSLDFQRAAGGYGGIIINN-RDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185
+++Y L Q G G ++ + D + V D I I+DWY L +
Sbjct: 126 TYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPN 185
Query: 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI 245
PD LINGLG + P +++V+ GK YR R+ + + F I
Sbjct: 186 KAP--PAPDTTLINGLGRNSAN----PSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSI 239
Query: 246 QNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305
H + ++E +G ++ I GQ +S +V +Q + Y+I A+P +
Sbjct: 240 DGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGN-YWIRANPSNGRNGFTG 298
Query: 306 KVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYG 365
+ AI Y A+ P T + + P G
Sbjct: 299 GINS-AIFRYQG----AAVAEPTTSQNSGTALNEANLIPL-------INPGAPGNPVPGG 346
Query: 366 QITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMS 425
++ + N T+NG ++PP+ P++L + L
Sbjct: 347 ADINLNLRIGRNA------TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLL------- 393
Query: 426 RAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKW 485
++I+ +EI +H+ G+ F VV YN
Sbjct: 394 ----PGGAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVRTP-------GSSVYNYV 440
Query: 486 DGVARSTTQVFP-GAWTAILVYLDNAGIW 513
+ V R + G DN G W
Sbjct: 441 NPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 270 bits (693), Expect = 4e-84
Identities = 114/493 (23%), Positives = 183/493 (37%), Gaps = 62/493 (12%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT-----W 88
D TI+ SP G +Q + +NG PGP++ +NV ++L +L W
Sbjct: 6 ADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHW 65
Query: 89 NGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+G +W DG CPI G ++ Y FQV DQ G+F+Y L Q G G +
Sbjct: 66 HGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 148 INN-RDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
+ + D + V + D I ++DWY + K G D LING G
Sbjct: 126 VYDPNDPHASRYDVDNDDTVITLADWYHTAAK------LGPRFPGGADATLINGKGRAPS 179
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
D+ +I V GK YR R+ ++ + + F I HNL ++E + +
Sbjct: 180 DSVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
++ I Q +SF++ +Q + Y+I A+P F N + AIL Y + PA P
Sbjct: 235 SIQIFAAQRYSFVLDANQAVDN-YWIRANPNFGNVGFDGGIN-SAILRYDGA--PAVEPT 290
Query: 327 PDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK 386
+ + ++ + V G + V +N
Sbjct: 291 TNQTTSVKPLNEVDLHPLVSTPV--------------PGAPSSGGVDKAINMAFNFNGSN 336
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEII 446
+ +NG S++PP+ P++L A S+ +EI
Sbjct: 337 F--FINGASFVPPTVPVLLQILSGAQTAQ-----------DLLPSGSVYVLPSNASIEIS 383
Query: 447 FQNNDTTVQS---YHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVF---PGAW 500
F + +H+ G+ F VV YN + + R G
Sbjct: 384 FPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDN 436
Query: 501 TAILVYLDNAGIW 513
I +N G W
Sbjct: 437 VTIRFDTNNPGPW 449
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 259 bits (663), Expect = 2e-79
Identities = 103/502 (20%), Positives = 183/502 (36%), Gaps = 65/502 (12%)
Query: 32 VFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWN 89
++WT + + G + VI NGQFP P + V V + + N + + + ++
Sbjct: 3 HTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFH 62
Query: 90 GVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIII 148
G+ + DGV T CPI G Y F V +G+++Y D Q G G II
Sbjct: 63 GLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFII 122
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG----VDLGVPDGILINGLGPY 204
+ P + D ++++ +S+WY L K + +P +++N
Sbjct: 123 KDDSF-PYDY---DEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL 178
Query: 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264
V+P TY LR+ NVG S F I++H + +VE +G T +
Sbjct: 179 T--------------WEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNV 224
Query: 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR---FVNSSEWNKVTGVAILHYSNSLGP 321
+ I V Q ++ LV T + ++ I+ ++ + + Y+
Sbjct: 225 TDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYN---KT 281
Query: 322 ASGPLPDPPNAYDTYFSMNQARSI-RWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA 380
A+ P + ++ D + + + + ITV V+++
Sbjct: 282 AALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDH----------VITVD---VVMDN-- 326
Query: 381 ELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYK 440
L G N I+Y P P ++ + A + +T
Sbjct: 327 -LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEI--------YGSNTHTFILEKD 377
Query: 441 GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDG---------VARS 491
+EI+ N DT +H+ G+AF + D ++ + R
Sbjct: 378 EIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRD 437
Query: 492 TTQVFPGAWTAILVYLDNAGIW 513
T V P + I DN G+W
Sbjct: 438 TLYVRPQSNFVIRFKADNPGVW 459
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 242 bits (619), Expect = 1e-72
Identities = 99/501 (19%), Positives = 165/501 (32%), Gaps = 55/501 (10%)
Query: 31 YVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTW 88
YVF + T P G K++V+ ING GP + V V V N+L + W
Sbjct: 36 YVF-NLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHW 94
Query: 89 NGVQHRKNSWQDGVLG-TNCPI-PAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGI 146
+G+ + + DG G T CPI P G TY+++ Q G+ +Y Q G G I
Sbjct: 95 HGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTI 153
Query: 147 IINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
IN P I+D+Y ++ L +N D +LING
Sbjct: 154 QING----PASLPYDIDLGVFPITDYYYRAADDLVHFTQNNAPP-FSDNVLINGTAVNPN 208
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYT 266
Y + + PGK +RLR+ N + NH + ++ +
Sbjct: 209 TGEG-----QYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVD 263
Query: 267 NMDIHVGQSFSFLVTTDQNASSDYYIVASPR-FVNSSEWNKVTGVAILHYSNSLGPASGP 325
++ + VGQ + ++ + + Y+ + AI HY+ + P P
Sbjct: 264 SLFLAVGQRYDVVIDASRAPDN-YWFNVTFGGQAACGGSLNPHPAAIFHYAGA--PGGLP 320
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
+ D +V R P SF V + L
Sbjct: 321 TDEGTPPVDHQCLDT------LDVRPVVPRSVPVNSFVKRPDNTLPVALDLTG-----TP 369
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445
+ +NG ++ +Y + ++ + +
Sbjct: 370 LFVWKVNGSDINVDWGKPIIDYILTGNTSYP-----------VSDNIVQVDAVDQWTYWL 418
Query: 446 IFQNNDTTVQS---YHMDGYAFFVVGMDFGVWTENSRG----------TYNKWDGVARST 492
I + + H+ G+ F V+G V + + N + R T
Sbjct: 419 IENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDT 478
Query: 493 TQVFPGAWTAILVYLDNAGIW 513
T + G W + DN G W
Sbjct: 479 TMLPAGGWLLLAFRTDNPGAW 499
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 2e-53
Identities = 68/313 (21%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 34 YDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQ 92
+D TI VT G +V G NGQ PGP+++V +V+VNV N+ P + W+GV
Sbjct: 6 FDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVH 65
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA---GGYGGIII 148
+ DGV G T PI AG ++TY+F+ D+IG+ +Y ++ G +G +I+
Sbjct: 66 QKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIV 124
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
+ + +P+ V D+ + +S W K E G + V D +N
Sbjct: 125 DPKQPLPIEKRV-TKDVIMMMSTWE---SAVADKYGEGGTPMNVADYFSVNAKSFPLTQP 180
Query: 209 AIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268
+ V+ G ++R G H++L+ +G Y +
Sbjct: 181 -----------LRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYADT 228
Query: 269 -DIHVGQSFSFLVTTDQNASSDYYIVAS-PRFVNSSEWNKVTGVAILHYSNSLGPASGPL 326
+ G+ + ++ D + V + + + ++ Y
Sbjct: 229 VLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVW 286
Query: 327 PDPPNAYDTYFSM 339
D + ++S
Sbjct: 287 KDKDYDPNFFYSE 299
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 8e-53
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 23/257 (8%)
Query: 34 YDWTISYVTASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQ 92
+D +I +G NGQ P P+++V +V VNV N P + W+G+
Sbjct: 5 FDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGML 64
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGG---YGGIII 148
R DGV T I G +TY+F+ + G+ +Y ++ +G +I+
Sbjct: 65 QRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIV 123
Query: 149 NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDA 208
++ +P+ V D + +SDW K E G+ V D IN
Sbjct: 124 EPKNPLPIEKTV-TKDYILMLSDWV---SSWANKPGEGGIPGDVFDYYTINAKSFPETQP 179
Query: 209 AIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268
I V+ G RLR+ G H + +G + +
Sbjct: 180 -----------IRVKKGDVIRLRLIGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDT 227
Query: 269 -DIHVGQSFSFLVTTDQ 284
I G+ + ++ D
Sbjct: 228 VLIGPGERYDVILNMDN 244
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 8e-43
Identities = 75/492 (15%), Positives = 142/492 (28%), Gaps = 94/492 (19%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTW 88
+ + + + G + ++ G FPGP L V V + ++N L EP L W
Sbjct: 14 GGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHW 73
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI-GSFFY----FPSLDFQRAAGGY 143
+G+ D IP G +WTY+F V ++ G+F+Y + Q AG
Sbjct: 74 HGLPIS--PKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLL 128
Query: 144 GGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGP 203
G +++ + +P + + + D + + + ++ D +L+NG
Sbjct: 129 GALVVESSL-DAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALR 187
Query: 204 YRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ- 262
V T RLR+ N + +Q+H L L+ +G + +
Sbjct: 188 PTL---------------VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEP 232
Query: 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPA 322
+ + + G+ LV + + + A P + + G+A P
Sbjct: 233 LEVSELLLAPGERAEVLVRLRKEGR--FLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPE 290
Query: 323 SGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL 382
+ P + R
Sbjct: 291 TLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTR---------------------RLVLTE 329
Query: 383 IEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGF 442
R +NG + + Q
Sbjct: 330 DMMAARFFINGQVF-DHRRVDLKGQA--------------------------------QT 356
Query: 443 MEII-FQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWT 501
+E+ +N +H+ + F V+ S G + + G
Sbjct: 357 VEVWEVENQGDMDHPFHLHVHPFQVL----------SVGGRPFPYRAWKDVVNLKAGEVA 406
Query: 502 AILVYLDNAGIW 513
+LV L G
Sbjct: 407 RLLVPLREKGRT 418
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 3e-31
Identities = 79/496 (15%), Positives = 147/496 (29%), Gaps = 91/496 (18%)
Query: 27 GGDPYVFYDWTISYVTASPLGDKQ-QVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
I + K+ NG P P + V + + VKN L E
Sbjct: 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATT 105
Query: 86 LTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQV-KDQIGSFFY----FPSLDFQRAA 140
+ W+GV QDG + PI AG Y+F++ +D G+++Y + Q
Sbjct: 106 IHWHGVPVP--PDQDGS--PHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFM 161
Query: 141 GGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGV-PDGILIN 199
G G +I + + + ISD + ++ + N G + +LIN
Sbjct: 162 GLAGAFVI--KA--KKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLIN 217
Query: 200 GLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSY 259
G P ++ R+R++N + LN RIQ +LV T+G
Sbjct: 218 GQFK------------PK----IKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGL 261
Query: 260 TVQ-QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+ + + L+ ++ + + + S + K + + +
Sbjct: 262 IEKTIYKEELFLSPASRVEVLIDAPKDGN---FKLESAYYDRDKMMVKEEPNTLFLANIN 318
Query: 319 LGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNR 378
L + LP + + + I + S +I + +++I
Sbjct: 319 LKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLI--- 375
Query: 379 PAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGT 438
N SY L
Sbjct: 376 -------------NRKSYDLKRIDLSSKL------------------------------- 391
Query: 439 YKGFMEII-FQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP 497
G +E N +H+ G F ++ ++ + R T V P
Sbjct: 392 --GVVEDWIVINKSHMDHPFHIHGTQFELIS------SKLNGKVQKAEFRALRDTINVRP 443
Query: 498 GAWTAILVYLDNAGIW 513
+ + D G+
Sbjct: 444 NEELRLRMKQDFKGLR 459
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-29
Identities = 49/264 (18%), Positives = 85/264 (32%), Gaps = 37/264 (14%)
Query: 27 GGDPYVFYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
G +D G + NG+ PGP L + ++ N P
Sbjct: 30 DGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHT 89
Query: 86 LTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFY---FPSLDFQRAAG 141
+ ++GV + DG G I G ++TY+F G+ Y L A G
Sbjct: 90 IHFHGVH---RATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKG 145
Query: 142 GYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGL 201
YGG I+ ++ P A D ++ + ++ + T + +NGL
Sbjct: 146 LYGGFIVEPKE--GRPPA--DDEMVMVMNGYNTDGG-------------DDNEFYSVNGL 188
Query: 202 GPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLN-FRIQNHNLLLVETEGSYT 260
+ D + V+ + R+ + NV +N F I + T T
Sbjct: 189 PFHFMDFPVK----------VKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLT 238
Query: 261 VQQNYTNMDIHVGQSFSFLVTTDQ 284
+ + GQ +
Sbjct: 239 PSEYTDTISQVQGQRGILELRFPY 262
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 117 bits (293), Expect = 7e-28
Identities = 65/504 (12%), Positives = 131/504 (25%), Gaps = 101/504 (20%)
Query: 28 GDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
G +Y+ I T P ++G +G PGP V VV N+ + P
Sbjct: 33 GQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNS 92
Query: 86 LTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFY----FPSLDFQRAAG 141
+ +G R + DG G Y + + + +Y G
Sbjct: 93 VHLHGSFSR--AAFDGW--AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRG 148
Query: 142 GYGGIIIN--NRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILIN 199
G ++ D + LP + DI + ++ +L +G L +
Sbjct: 149 QAGLYMLTDPAEDALNLPSGYGEFDIPMILTSK----------QYTANGNLVTTNGELNS 198
Query: 200 GLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLL-------L 252
G I +G P+ NV + YR R + +S S + + + +
Sbjct: 199 FWGDV-----IHVNGQPWPFKNV-EPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKV 252
Query: 253 VETEGSYTVQ-QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVA 311
+ ++ + + + I + + + + A + +
Sbjct: 253 IASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIG-------GIGT 305
Query: 312 ILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTD 371
Y N+ + D DT R + + +
Sbjct: 306 DTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPT----- 360
Query: 372 VYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVD 431
T+NG+++ L+ V
Sbjct: 361 -----------------WTINGVAFADVQNRLLA---------------------NVPVG 382
Query: 432 TSLINGTYKGFMEIIFQNNDTTV-QSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVAR 490
T N H+ F V+ G N+ T ++ +
Sbjct: 383 TVER---------WELINAGNGWTHPIHIHLVDFKVISRTSG----NNARTVMPYESGLK 429
Query: 491 STTQVFPGAWTAILVYL-DNAGIW 513
+ + + G++
Sbjct: 430 DVVWLGRRETVVVEAHYAPFPGVY 453
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-25
Identities = 77/494 (15%), Positives = 148/494 (29%), Gaps = 59/494 (11%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
TI ++ G G NG GP + + V V++ N L E L W+G++
Sbjct: 20 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 79
Query: 94 RKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIII- 148
DG IP G + V + ++ P Q A G G ++I
Sbjct: 80 PGEV--DGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 135
Query: 149 -NNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ + LP D+ + + D + + +D + G
Sbjct: 136 DDEILKLMLPKQWGIDDVPVIVQDK--------KFSADGQIDYQLDVMTAAVGWFGDTLL 187
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN-HNLLLVETEGSYTVQ-QNY 265
+G Y G RLR+ N + SLNF + L ++ ++G +
Sbjct: 188 T----NGAIYPQHAAPRGW-LRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKV 242
Query: 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGP 325
+ + + +G+ F LV + N D + + + ++ ASG
Sbjct: 243 SELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPH-PVMRIQPIAISASGA 301
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
LPD ++ S+ + +S + + + + G
Sbjct: 302 LPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMG 361
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445
++++ I G K + G E
Sbjct: 362 HG-----NMNHMNHGGKFDFHHANKINGQ---------AFDMNKPMFAAAKGQ----YER 403
Query: 446 IFQNNDTTVQSY--HMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAI 503
+ + + H+ G F ++ + + G W + T +V G + +
Sbjct: 404 WVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAG----W----KDTVKV-EGNVSEV 454
Query: 504 LV----YLDNAGIW 513
LV +
Sbjct: 455 LVKFNHDAPKEHAY 468
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 9e-25
Identities = 74/493 (15%), Positives = 141/493 (28%), Gaps = 100/493 (20%)
Query: 37 TISYVTASPLGDKQQVIGINGQ-FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRK 95
+ + + G + P + + V + +KN L EP ++ W+G
Sbjct: 12 PVPPLIKEATYIEATASGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN- 70
Query: 96 NSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFY----FPSLDFQRAAGGYGGIIINNR 151
D + I G ++ Y F V ++ G++ Y Q G G +I+ +
Sbjct: 71 -WHNDAH--PSFAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDS 127
Query: 152 DVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIV 211
L F D+ + ISD V P ++ LG +A +V
Sbjct: 128 G-SDLGFKYGVNDLPLVISDRRF--------IGGAPVYNPTPMEMIAGFLG----NAVLV 174
Query: 212 PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHN-----LLLVETEGSYTVQ-QNY 265
G+ + + G YRLR+ N + I N + L+ + + +
Sbjct: 175 N-GVKDAVFKLSGGS-YRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEV 232
Query: 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGP 325
+ + + +V + Y + +P
Sbjct: 233 RALFLAPAERAEVVVELGEGV---YLLKNTPFD------------------------PMH 265
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
L + ++ + V G P + L
Sbjct: 266 LEMGHGMQEALPEGSEYTIATFLVE-GKGEAVPVEALSDPPPEPPKPTRTRRFALSLSGM 324
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445
+W T+NG+ + S PL V+ +E+
Sbjct: 325 QW--TINGMFW-NASNPLFE---------------------HVSVEG----------VEL 350
Query: 446 IFQNNDTTV--QSYHMDGYAFFVV-----GMDFGVWTENSRGTYNKWDGVARSTTQVFPG 498
ND H+ G+ +++ ++RG D + T ++PG
Sbjct: 351 WEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRL-PTDLGLKDTVLIWPG 409
Query: 499 AWTAILVYLDNAG 511
I+V D
Sbjct: 410 ETVKIVVNFDAKK 422
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 4e-24
Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 29/276 (10%)
Query: 34 YDWTISYVTASPLGDKQ-QVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQ 92
T+ S + V GING++ GP + V +V + N L E + +T G+Q
Sbjct: 21 LFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQ 80
Query: 93 HRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFY----FPSLDFQRAAGGYGGIII 148
G + +W ++ + +Y Q G G ++
Sbjct: 81 VP--GPLMGG--PARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLV 136
Query: 149 NNRD--VIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRY 206
+ +P+P D + I D + + V D +L+N
Sbjct: 137 EDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGF-VGDTLLVN------- 188
Query: 207 DAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN-HNLLLVETEGSYTVQ-QN 264
G+ + V G RLR+ N S ++ + L ++ + + +
Sbjct: 189 -------GVQSPYVEVSRGW-VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVS 240
Query: 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN 300
+ + G+ LV + V+
Sbjct: 241 VKQLSLAPGERREILVDMSNGDEVSITCGEAASIVD 276
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 90.9 bits (225), Expect = 2e-19
Identities = 77/533 (14%), Positives = 138/533 (25%), Gaps = 113/533 (21%)
Query: 28 GDPYVFYDWTISYVTASPLGD--KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
+Y+ T+ T D ++ G NG FPGP + V N NV V N+L
Sbjct: 22 SKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHF 81
Query: 86 LTWNGVQHRKNSW--------------------QDGV------LGTNCPIPAGWNWTYQF 119
L + H +S DG P Y +
Sbjct: 82 LPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHY 141
Query: 120 QVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTK 175
+ + +Y AG G II++ L + D+ + I+D
Sbjct: 142 PNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTIN 201
Query: 176 SHKKLR-KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHN 234
L +P+ ++ I+ +G + + VEP K YR RV N
Sbjct: 202 EDGSLFYPSAPENPSPSLPNPSIVPAFCGET----ILVNGKVWPYLEVEPRK-YRFRVIN 256
Query: 235 VGISTSLNFRIQN-HNLLLVETEGSYTVQ-QNYTNMDIHVGQSFSFLVTTDQNASSDYYI 292
+ + N + N + + + ++G + + + + + ++ +
Sbjct: 257 ASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIIL 316
Query: 293 VASPRFVNSSEWNKVTGVAILHYSNSLG-PASGPLPDPPNAYDTYFSMNQARSIRWNVSA 351
S + + L P +Y + + ++IR A
Sbjct: 317 ANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSV-QHERIQNIRTLKLA 375
Query: 352 GAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI 411
G + LN + P
Sbjct: 376 GTQDEYGRPVL---------------------------LLNNKRWHDP------------ 396
Query: 412 PGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDF 471
++ PKV T+ N H+ +F V+
Sbjct: 397 ------------VTETPKVGTT---------EIWSIINPTRGTHPIHLHLVSFRVLDRRP 435
Query: 472 GVWTENSRGTYNKWDGVARS----------TTQVFPGAWTAILVYL-DNAGIW 513
+ G A T Q G I +G +
Sbjct: 436 FDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY 488
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 1e-18
Identities = 41/248 (16%), Positives = 75/248 (30%), Gaps = 32/248 (12%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT--WNGVQHRKNSWQDGVLG 104
G + PG + V + N+ N + + V G
Sbjct: 45 GVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGG 97
Query: 105 -TNCPIPAGWNWTYQFQVKDQIGSFFY---FPSLDFQRAAGGYGGIIINNRDVIPLPFAV 160
+ G T+ F+ G + Y + A G YG I++ ++ A
Sbjct: 98 AESSFTAPGHTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE----GLAP 152
Query: 161 PDGDITIFISDWYTKSHKKLRKDVENGVDLGV---PDGILING-LGPYRYDAAIVPDGIP 216
D + + D+YTK + + D ++ NG +G + ++
Sbjct: 153 VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLT----- 207
Query: 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSF 276
+ G+T RL + N G + +F + V EG N I G +
Sbjct: 208 -----AKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA 262
Query: 277 SFLVTTDQ 284
+
Sbjct: 263 IVEFKVEV 270
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 9e-17
Identities = 50/245 (20%), Positives = 85/245 (34%), Gaps = 26/245 (10%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106
G + + +G PG ++ V V V N+ + V + Q G
Sbjct: 55 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSST---VPHNVDFHAATGQGGGAAAT 111
Query: 107 CPIPAGWNWTYQFQVKDQIGSFFY---FPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDG 163
G T+ F+ Q G + Y + A G YG I++ ++ D
Sbjct: 112 -FTAPGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE----GLPKVDK 165
Query: 164 DITIFISDWYTKSHKKLRKDVENGVDL---GVPDGILING-LGPYRYDAAIVPDGIPYQL 219
+ I D+YTK K + +D P+ ++ NG +G D A+
Sbjct: 166 EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALK-------- 217
Query: 220 INVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFL 279
+ G+T R+ V N G + +F + V EG + +N + + G S
Sbjct: 218 --AKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVE 275
Query: 280 VTTDQ 284
D
Sbjct: 276 FKVDI 280
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 78.1 bits (192), Expect = 3e-16
Identities = 31/232 (13%), Positives = 62/232 (26%), Gaps = 40/232 (17%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
+ + PGP++ V + + N +D L +G+ +
Sbjct: 8 RHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDY 67
Query: 94 RKNSWQDGVLGTNCPIPAGWNWTYQFQVK------------DQIGSFFYFPSLDFQR--- 138
+S DG + G TY ++ G + Y +
Sbjct: 68 EISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGT 125
Query: 139 ---AAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDG 195
G YG +I+ + + PD TI +D + K +
Sbjct: 126 GGIRNGLYGPVIVRRKGDVL-----PDATHTIVFNDMTINNRKPHTGPDFEATVGDRVEI 180
Query: 196 ILI-------------NGLGPYRYDAAIVPDGIPYQL--INVEPGKTYRLRV 232
++I + R PD + P ++ ++
Sbjct: 181 VMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQI 232
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 7e-16
Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 32/249 (12%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT--WNGVQHRKNSWQDGVLG 104
NG+ PGP L V V +++KN D ++ + ++G G
Sbjct: 180 NTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234
Query: 105 TNCPIPAGWNWTYQFQVKDQIGSFFY---FPSLDFQRAAGGYGGIIINNRDVIPLPFAVP 161
G F+ G + Y PS+ G YG +++ +P
Sbjct: 235 FT-QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLPQ----V 288
Query: 162 DGDITIFISDWYTKSHKKLRKDVENGVDL---GVPDGILING-LGPYRYDAAIVPDGIPY 217
D + + + YT + E + P+ L NG +G +
Sbjct: 289 DREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLTRSHPLY------ 342
Query: 218 QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV--QQNYTNMDIHVGQS 275
G+T R+ G + + +F + V + GS + + G +
Sbjct: 343 ----ASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGA 398
Query: 276 FSFLVTTDQ 284
D+
Sbjct: 399 TIVDFKIDR 407
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 80.4 bits (197), Expect = 7e-16
Identities = 35/247 (14%), Positives = 72/247 (29%), Gaps = 36/247 (14%)
Query: 55 INGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWN 114
+ GP L+ V + KN P + +GVQ + T P G
Sbjct: 803 EHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--------TVTPTLPGET 854
Query: 115 WTYQFQVKDQI---------GSFFYFPSLDF--QRAAGGYGGIIINNRDVIPLPFAVPDG 163
TY +++ ++ + Y+ ++D +G G +I+ R + +
Sbjct: 855 LTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKL 914
Query: 164 DITIFISD------WYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPY 217
+ + WY + K D V+ + I N + + +
Sbjct: 915 EFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAIN---GRMFGNLQG 971
Query: 218 QLINVEPGKTYRLRVHNVGISTSLN-FRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSF 276
+ + G + +G L+ H+ + DI G
Sbjct: 972 --LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSS-----DVFDIFPGTYQ 1024
Query: 277 SFLVTTD 283
+ +
Sbjct: 1025 TLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 79.6 bits (195), Expect = 1e-15
Identities = 31/254 (12%), Positives = 70/254 (27%), Gaps = 35/254 (13%)
Query: 55 INGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG---------T 105
+ F GPI+ T V V++KN P +G+ + K +G +
Sbjct: 88 VWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEH--EGAIYPDNTTDFQRA 145
Query: 106 NCPIPAGWNWTYQFQVKDQ---------IGSFFYFP--SLDFQRAAGGYGGIIINNRD-V 153
+ + G +TY ++ + Y A+G G +II +D +
Sbjct: 146 DDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSL 205
Query: 154 IPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAI--- 210
D + + S L +++ ++
Sbjct: 206 DKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGY 265
Query: 211 VPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDI 270
+ +++ + + +G + H L Y + +++
Sbjct: 266 TFGSLSG--LSMCAEDRVKWYLFGMG-NEVDVHAAFFHGQALTNKN--YRIDT----INL 316
Query: 271 HVGQSFSFLVTTDQ 284
F +
Sbjct: 317 FPATLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 57.3 bits (137), Expect = 1e-08
Identities = 35/281 (12%), Positives = 82/281 (29%), Gaps = 37/281 (13%)
Query: 30 PYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWN 89
V+ ++T + T ++ + GP++ + V N PL +
Sbjct: 422 KLVYREYTDASFTNRK---ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPI 478
Query: 90 GVQHRKNS-----------WQDGVLGTNCPIPAGWNWTYQFQVKDQIG---------SFF 129
GV+ KN+ V + + +TY++ V ++G +
Sbjct: 479 GVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKM 538
Query: 130 YFPSLDFQR--AAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187
Y+ ++D + G G + I + + D D ++ ++ L +
Sbjct: 539 YYSAVDPTKDIFTGLIGPMKICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIR 598
Query: 188 VDLGVPDGILINGLGPYRYDAAIVPDGIPYQL---INVEPGKTYRLRVHNVGIST-SLNF 243
+ PD + + +G Y + + G + + + G
Sbjct: 599 MFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGI 658
Query: 244 RIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ 284
+ L ++ S + + D
Sbjct: 659 YFSGNTYLWRGERRD--------TANLFPQTSLTLHMWPDT 691
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 1e-15
Identities = 34/233 (14%), Positives = 66/233 (28%), Gaps = 42/233 (18%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH 93
+ + PGP++ V + + N +D L +G+ +
Sbjct: 49 RHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDY 108
Query: 94 RKNSWQDGVLGTNCPIPAGWNWTYQFQVKD------------QIGSFFYFPSLDFQR--- 138
+S DG + G TY ++ G + Y +
Sbjct: 109 EISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGT 166
Query: 139 ---AAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDG 195
G YG +I+ + + PD TI +D +++K + +G
Sbjct: 167 GGIRNGLYGPVIVRRKGDVL-----PDATHTIVFNDMTI-NNRKPHTGPDFEATVGDRVE 220
Query: 196 ILINGLGPY--------------RYDAAIVPDGIPY--QLINVEPGKTYRLRV 232
I++ G Y R PD P ++ ++
Sbjct: 221 IVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQI 273
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 3e-12
Identities = 32/274 (11%), Positives = 69/274 (25%), Gaps = 57/274 (20%)
Query: 31 YVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNG 90
Y Y+ GP L + V+ KN +PL + G
Sbjct: 38 YREYEAYFQKEKPQSRTS---------GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQG 88
Query: 91 VQHRKNS----WQDGVLG---TNCPIPAGWNWTYQFQVKDQIGS---------FFYFPSL 134
+++ K S + D L + + G +TY++ + + G Y+ +
Sbjct: 89 IKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYV 148
Query: 135 D--FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGV 192
+ +G G ++I + + DG +F + ++ + V
Sbjct: 149 NLVEDFNSGLIGPLLICKKGTLT-----EDGTQKMF--------------EKQHVLMFAV 189
Query: 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLL 251
D I V + + +
Sbjct: 190 FDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQ--- 246
Query: 252 LVETEGSYTVQQNYTNM-DIHVGQSFSFLVTTDQ 284
+ + + S + +T
Sbjct: 247 ------VLEQNHHKISAITLVSATSTTANMTVSP 274
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 61.2 bits (147), Expect = 6e-10
Identities = 35/250 (14%), Positives = 72/250 (28%), Gaps = 42/250 (16%)
Query: 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS----WQDGVLGTN---CPIPA 111
GP + VV+ +KN P+ L GV + K S + D +
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFP 131
Query: 112 GWNWTYQFQVKDQIG---------SFFYFP--SLDFQRAAGGYGGIIINNRDVIPLPFAV 160
G + TY +QV + G ++ Y L +G G +++ +
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 161 PDGDITIFIS------DWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDG 214
+ + W++++ L +D + P +NG
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNR---------- 241
Query: 215 IPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQ 274
+ K+ V +G + ++ + LV ++ +I
Sbjct: 242 -SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASL-------EISPIT 293
Query: 275 SFSFLVTTDQ 284
+
Sbjct: 294 FLTAQTLLMD 303
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 60.8 bits (146), Expect = 8e-10
Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 27/248 (10%)
Query: 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS----WQDGVLG-TNCPIP 110
GP+L +++ KN P + +G+ + GV + PI
Sbjct: 446 ESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPIL 505
Query: 111 AGWNWTYQFQVKDQIG---------SFFYFPSLD--FQRAAGGYGGIIINNRDVIPLPFA 159
G + Y++ V + G + +Y ++ A+G G ++I ++ +
Sbjct: 506 PGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGN 565
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPY-- 217
D I ++ L P G+ + + +G +
Sbjct: 566 QIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDS 625
Query: 218 QLINVEPGKTYRLRVHNVGIST-SLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSF 276
++V + + ++G T L+ + T+ +
Sbjct: 626 LQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVYED-TL-------TLFPFSGE 677
Query: 277 SFLVTTDQ 284
+ ++ +
Sbjct: 678 TVFMSMEN 685
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 2e-09
Identities = 89/631 (14%), Positives = 179/631 (28%), Gaps = 225/631 (35%)
Query: 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQ---DGVLGTNCPIPAGWNW 115
P IL+ + ++ K+ + L L W + ++ Q + VL N +
Sbjct: 41 MPKSILS-KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN----YKFLM 95
Query: 116 T-YQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISD--W 172
+ + + + PS+ + Y I RD + D +F
Sbjct: 96 SPIKTEQRQ--------PSMMTRM----Y----IEQRDRL-------YNDNQVFAKYNVS 132
Query: 173 YTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT----- 227
+ + KLR+ + L +LI+G+ G GKT
Sbjct: 133 RLQPYLKLRQALLE---LRPAKNVLIDGVL-----------GS---------GKTWVALD 169
Query: 228 ----YRL------RVH--NVGISTSLNFRIQNHNLLLVETEGSYT--------------- 260
Y++ ++ N+ S ++ LL + + ++T
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 261 ---------VQQNYTNM--------DIHVGQSFSF----LVTTDQNASSDYYIVASPRFV 299
+ Y N + +F+ L+TT +D+ A+ +
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 300 NSSEWNKV----TGVAILHYSNSLGPASGPLP-------------------DPPNAYDTY 336
+ + ++L L LP D +D +
Sbjct: 290 SLDHHSMTLTPDEVKSLL--LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 337 FSMN---QARSIRWNVSAGAARPN-PQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLN 392
+N I S P + F + ++ P L+ W
Sbjct: 348 KHVNCDKLTTIIE--SSLNVLEPAEYRKMFDRLSVFPPSAHI----PTILLSLIW----- 396
Query: 393 GISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDT 452
+ S +++ + Y L+ + PK T I Y +E+ + +
Sbjct: 397 --FDVIKSDVMVVVNKL---------HKYSLVEKQPKESTISIPSIY---LELKVKLENE 442
Query: 453 T------VQSY--------------HMDGYAFFVVG--MDFGVWTENSRGTYNKWDGVAR 490
V Y ++D Y + +G + E+ +
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK---NIEHPE----RMT---- 491
Query: 491 STTQVFPGAWTAILVYLD---------NAGI-WNLRAENLDTWYLGQ----EVYVNVINP 536
+F +V+LD + WN L+T L Q + Y+ +P
Sbjct: 492 ----LFR------MVFLDFRFLEQKIRHDSTAWNASGSILNT--LQQLKFYKPYICDNDP 539
Query: 537 EIDKSAPLLPDNAIYCG--LLSSLQKDQAQR 565
+ ++ + D L+ S D +
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRI 570
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 4e-08
Identities = 30/207 (14%), Positives = 64/207 (30%), Gaps = 38/207 (18%)
Query: 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS-------WQDGVLGTNCP 108
+ GP++ + + V KN P L +G+ + K+S +
Sbjct: 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNA 122
Query: 109 IPAGWNWTYQFQVKDQIGS---------FFYFPSLD--FQRAAGGYGGIIINNRDVIPLP 157
I +TY + + G + Y+ +++ +G G ++I + +
Sbjct: 123 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE 182
Query: 158 FAVPDGD---ITIF-----ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
+P + +F WY + + ING Y+
Sbjct: 183 TNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAING---MIYN-- 237
Query: 210 IVPDGIPYQLINVEPGKTYRLRVHNVG 236
+ + + RL + N+G
Sbjct: 238 -------LPGLRMYEQEWVRLHLLNLG 257
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 42/261 (16%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQ-HRKNSWQDGVLGT 105
G + + NG PGP++ V N V + + N L + + H + + G
Sbjct: 56 GTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTL---LHNIDFH---AATGALGGG 109
Query: 106 N-CPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIPLPFAV 160
+ G T +F+ + G F Y + + + +G G I++ RD +
Sbjct: 110 ALTQVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQ 168
Query: 161 P---DGDITIFISDWYTK-----------SHKKLRKDVENGVDLGVPDGILINGL-GPYR 205
P D + D+Y + + +D + P I+ NG G
Sbjct: 169 PLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT 228
Query: 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV--QQ 263
D A+ G+ R+ V + + + + V G +
Sbjct: 229 GDHALT----------AAVGE--RVLVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDL 276
Query: 264 NYTNMDIHVGQSFSFLVTTDQ 284
+ I G + + T Q
Sbjct: 277 DQETWLIPGGTAGAAFYTFRQ 297
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 50/261 (19%), Positives = 82/261 (31%), Gaps = 42/261 (16%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQ-HRKNSWQDGVLGT 105
G Q + NG PGP L V V + + N + + V H + G
Sbjct: 50 GTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAM---PHNVDFH---GATGALGGA 103
Query: 106 NCP-IPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIPLPFAV 160
+ G T +F+ + G+F Y + + + +G G +++ RD + P
Sbjct: 104 KLTNVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162
Query: 161 P---DGDITIFISDWYTKSHKKLR-----------KDVENGVDLGVPDGILINGL-GPYR 205
P D TI D Y + D + P I+ NG G
Sbjct: 163 PLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT 222
Query: 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV--QQ 263
A+ + G+T L T + + V G + Q+
Sbjct: 223 GANALT----------AKVGETVLLIHSQANRDTR--PHLIGGHGDWVWETGKFANPPQR 270
Query: 264 NYTNMDIHVGQSFSFLVTTDQ 284
+ I G + + L T Q
Sbjct: 271 DLETWFIRGGSAGAALYTFKQ 291
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 4e-06
Identities = 24/187 (12%), Positives = 60/187 (32%), Gaps = 30/187 (16%)
Query: 39 SYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSW 98
S+ G+ + +G+ GP + N++V +N P + + + ++
Sbjct: 180 SFTQPLYRGELNEHLGL----LGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR 235
Query: 99 QDGVLGTNCPIPAGWNWTYQFQVKDQIG---------SFFYFPSLDFQR--AAGGYGGII 147
Q N + TY ++V+ + ++ Y +D ++ +G G ++
Sbjct: 236 QGAEPRKN-FVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLL 294
Query: 148 INNRDVIPLPFAVPDGDITIFI--------SDWYTKSHKKLRKDVENGVDLGVPDGIL-- 197
+ + + + + WY + + + + P
Sbjct: 295 VCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENY 354
Query: 198 ----ING 200
ING
Sbjct: 355 RFHAING 361
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.95 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.94 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.94 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.94 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.93 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.93 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.92 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.86 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.84 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.82 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.81 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.81 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.76 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.72 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.71 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.63 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.6 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.55 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.47 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.47 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.45 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.4 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.38 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.34 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.32 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.28 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.26 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.25 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.24 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.22 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.21 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.17 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.14 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.12 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.1 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.1 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.01 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.0 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.94 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.91 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.88 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.8 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.78 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.73 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 98.73 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.7 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.7 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.68 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.66 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.61 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.6 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.6 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.6 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.56 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.52 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.48 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.47 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.43 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.4 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.39 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.37 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.33 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.3 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.27 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.25 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.24 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.22 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.13 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.06 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.02 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.99 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.97 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.91 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.9 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.9 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 97.89 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.77 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.71 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.57 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 97.14 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 96.96 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 96.91 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 96.85 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 96.83 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 96.8 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 96.67 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 96.59 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.51 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.26 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 95.66 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.43 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 95.28 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 94.45 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 94.22 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.21 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 93.94 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 91.3 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 91.27 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 90.76 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 88.55 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-101 Score=850.52 Aligned_cols=506 Identities=29% Similarity=0.540 Sum_probs=403.4
Q ss_pred CeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|+|++..+++||.++++|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 4799999999999999999999999999999999999999999999999998 99999999999999999999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhCC
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g 187 (595)
+|+||++|+|+|++ +++||||||||.+.|+++||+|+|||++++....|+ ..|+|++|+|+||+++....+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 799999999999999999999999999987655555 3468999999999998776554333322
Q ss_pred --CCCCCCCeEEEcCCCCCCCCCCC-----------C-CCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE
Q 007633 188 --VDLGVPDGILINGLGPYRYDAAI-----------V-PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253 (595)
Q Consensus 188 --~~~~~~d~~liNG~~~~~~~~~~-----------~-~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi 253 (595)
...+.++.++|||+..++|+... . ...+..+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 12246799999999988774321 0 112234589999999999999999999999999999999999
Q ss_pred eecCcceeeeeeeEEEEeccceEEEEEEeC-CCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCC--CCCCCCCCC
Q 007633 254 ETEGSYTVQQNYTNMDIHVGQSFSFLVTTD-QNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGP--ASGPLPDPP 330 (595)
Q Consensus 254 a~DG~~~~p~~~d~l~i~pGqR~dvlv~~~-~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~lp~~p 330 (595)
++||.+++|..++++.|+|||||||+|+++ +.+| +|||++....... ......|+|+|.++... +..+.|..+
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~~p 315 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTP 315 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCCCC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999994 4567 9999998764211 23567899999876521 111223222
Q ss_pred CCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcC
Q 007633 331 NAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFN 410 (595)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~ 410 (595)
...+....... .++ .+....+.+.| ..+++++.+..+.. ..++..+|+|||++|..+..|++.+.+.+
T Consensus 316 ~~~~~~~~~~~--~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~ 383 (552)
T 1aoz_A 316 AWDDFDRSKNF--TYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKYN 383 (552)
T ss_dssp CTTCHHHHHHH--HTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHTT
T ss_pred ccccccccccc--ccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhhc
Confidence 11111100000 000 01100011111 24567777765321 23456789999999998899999887777
Q ss_pred CCCccccCCCCCCC-----------CCCCccceeEEecCCCcEEEEEEEcCCC------ccceeeecCceEEEEEEeCCc
Q 007633 411 IPGAYKLDFPYKLM-----------SRAPKVDTSLINGTYKGFMEIIFQNNDT------TVQSYHMDGYAFFVVGMDFGV 473 (595)
Q Consensus 411 ~~~~~~~~~~~~p~-----------~~~~~~~~~v~~~~~g~~ve~vi~N~~~------~~HP~HlHG~~F~Vl~~g~G~ 473 (595)
+++.|+.+++..+. +...+.++.++.++.|++|+|+|+|.+. ..||||||||+||||+++.|.
T Consensus 384 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~ 463 (552)
T 1aoz_A 384 LLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGK 463 (552)
T ss_dssp CTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESS
T ss_pred CccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCc
Confidence 77777654443211 1234566788999999999999999873 459999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCcccccc
Q 007633 474 WTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553 (595)
Q Consensus 474 ~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~~~~c~ 553 (595)
|++.....||+.+|+|||||.|++++|++|||++||||.|+|||||++|++.|||+.|.+... +..++|++.+.|+
T Consensus 464 ~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~----~~~~~P~~~~~C~ 539 (552)
T 1aoz_A 464 FSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE----KVGRIPTKALACG 539 (552)
T ss_dssp CCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG----GCCCCCHHHHSSH
T ss_pred cCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch----hhccCCcchhhhh
Confidence 987555679999999999999999999999999999999999999999999999999976533 3556899999999
Q ss_pred CccC
Q 007633 554 LLSS 557 (595)
Q Consensus 554 ~~~~ 557 (595)
.++.
T Consensus 540 ~~~~ 543 (552)
T 1aoz_A 540 GTAK 543 (552)
T ss_dssp HHHH
T ss_pred ccCc
Confidence 8764
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-99 Score=829.19 Aligned_cols=489 Identities=22% Similarity=0.301 Sum_probs=385.8
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-C
Q 007633 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
.+.+++|+|++++.++++||+.+++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ |
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 456899999999999999999999999999999999999999999999999998 89999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCce-eEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDI-TIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 5999999999999999999999999998764 234 8887 9999999999877765544
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCC---CCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAI---VPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV 261 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~---~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~ 261 (595)
..+ ..+.+|.++|||++.++|+... .......+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++
T Consensus 218 ~~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~ 296 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296 (580)
T ss_dssp TTS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEE
T ss_pred hcc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCC
Confidence 432 3567899999999998885321 112334689999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccc
Q 007633 262 QQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQ 341 (595)
Q Consensus 262 p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~ 341 (595)
|..++++.|+|||||||+|++++++| +|||++.....+..........|||+|.++... .|..+.....+...+.
T Consensus 297 P~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~~~~~~ 371 (580)
T 3sqr_A 297 PYTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRGTCEDE 371 (580)
T ss_dssp EEEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCCCSCCS
T ss_pred ceEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccchhhcc
Confidence 99999999999999999999998888 999999876433211233578999999765321 1211110000001110
Q ss_pred ccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecC-CCCCcHhhhhhcCCCCccccCCC
Q 007633 342 ARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYL-PPSTPLMLAQQFNIPGAYKLDFP 420 (595)
Q Consensus 342 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~-~~~~P~~~~~~~~~~~~~~~~~~ 420 (595)
...++.+..+.+.|. ..+.++.+.. ..++..+|+|||++|. +++.|.++..+. |. .++
T Consensus 372 ---~~~~L~P~~~~~~~~--------~~~~~~~l~~----~~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~- 430 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG--------YSLVDEQVSS----AFTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF- 430 (580)
T ss_dssp ---CGGGCCBSSCCBCCS--------EEEEEEEEEE----EESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC-
T ss_pred ---cccccccCCCCCCCC--------ccceEEEEEe----ccCCceeEEECCEecccCCCCCchhhhhc---CC--ccC-
Confidence 001233322222221 2233333332 2345789999999997 578898765432 11 011
Q ss_pred CCCCCCCCccceeEEecC----CCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCC-CCCCCCCCCCcccEE
Q 007633 421 YKLMSRAPKVDTSLINGT----YKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENS-RGTYNKWDGVARSTT 493 (595)
Q Consensus 421 ~~p~~~~~~~~~~v~~~~----~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv 493 (595)
|. ..+++.++ .|++|||+|+|.+ ...||||||||+||||++|.|.|++.. ...||+.||++|||+
T Consensus 431 --~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 431 --PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp --CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred --CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 11 23444554 6999999999987 788999999999999999999998754 367999999999999
Q ss_pred EeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCccCC
Q 007633 494 QVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLSSL 558 (595)
Q Consensus 494 ~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~~~ 558 (595)
.|+|+||++|||++||||+|+|||||++|++.||++.|.+ .++..++..++|++ ...|..++..
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i~~~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSIAVKMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGCCCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHHhhccCCcHHHHHhhHHHhhh
Confidence 9999999999999999999999999999999999998776 44444333335655 5689887654
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-96 Score=805.89 Aligned_cols=480 Identities=22% Similarity=0.298 Sum_probs=375.5
Q ss_pred CeEEEEEEEEEEEecCCC-eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 30 PYVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G-~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.+++|+|++++..++||| .++++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 378999999999999999 7999999999999999999999999999999999 99999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhC
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN 186 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~ 186 (595)
|||+||++|+|+|++++++||||||||.+.|+++||+|+|||++++. |+ .+|+|++|+|+||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976999999999999999999999999999753 33 458999999999999988776543221
Q ss_pred ----CCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee
Q 007633 187 ----GVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ 262 (595)
Q Consensus 187 ----g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p 262 (595)
....+.+|.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 22346789999999986 899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccC---CCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 007633 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN---SSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM 339 (595)
Q Consensus 263 ~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~ 339 (595)
..++++.|+|||||||+|++++.++++|||++...... ..........++|+|.++... |..+........+
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~ 297 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFL 297 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSC
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccccccccc
Confidence 99999999999999999999875544999999765321 111223567899999865421 1111000000001
Q ss_pred ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCC
Q 007633 340 NQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 340 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~ 419 (595)
+.. .+.+....+.+ ..+++++.+..+.....++..+|+|||++|..+..|+++..+. .+.+..
T Consensus 298 ~~~-----~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~~-- 360 (534)
T 1zpu_A 298 DDF-----YLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQAN-- 360 (534)
T ss_dssp CGG-----GCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGTT--
T ss_pred ccc-----cceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCcccC--
Confidence 110 11111111111 1345677665432212355678999999999889998765431 122210
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCC----------ccCCCCCCCCCCCCCCc
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFG----------VWTENSRGTYNKWDGVA 489 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G----------~~~~~~~~~~n~~~p~~ 489 (595)
.+. ....+++++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|+|
T Consensus 361 --~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~ 435 (534)
T 1zpu_A 361 --NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMR 435 (534)
T ss_dssp --CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEE
T ss_pred --CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCe
Confidence 010 1112356788999999999999998899999999999999999875 5554433233 468999
Q ss_pred ccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCC--CCCCCccc-cccCc
Q 007633 490 RSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSA--PLLPDNAI-YCGLL 555 (595)
Q Consensus 490 rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~--~~~p~~~~-~c~~~ 555 (595)
||||.|+|++|++|||++||||.|+|||||++|++.|||..|.+. ++..+++ .++|++.. .|..+
T Consensus 436 RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~~~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 436 RDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFGIQDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp ESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHHHHCGGGSCCHHHHHHHHHT
T ss_pred eeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-ccccccccccCCChhHhhhhhcc
Confidence 999999999999999999999999999999999999999998764 3333333 56676654 55443
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-95 Score=792.79 Aligned_cols=478 Identities=23% Similarity=0.358 Sum_probs=368.2
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC-----CceeeeCCccCCCCCCCCCCCC-C
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-----PLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
..|+|++++..++|||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++++. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999889999999999999999999999999987542 22343345678999999999865432
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~ 264 (595)
.+.....+|.++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12233478999999998766632 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 265 ~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
++++.|+|||||||+|++++++| +|||++.....+.. .......|+|+|.++.... |....+. .... .+.
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~-~~~~-~~~---- 305 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTVAST-VHTK-CLI---- 305 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCS-SCSS-BCC----
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCCCCC-CCcc-ccc----
Confidence 99999999999999999998778 99999987543221 1123457999998654211 1111000 0000 000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~ 424 (595)
..++.+....+.|.. .. ...+++++.+... .++ .+|+|||++|..++.|++++.+ .+.+.. .+
T Consensus 306 -~~~L~p~~~~~~p~~-~~--~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~---~g~~~~--~~--- 368 (495)
T 3t6v_A 306 -ETDLHPLSRNGVPGN-PH--QGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQIC---SGANTA--AD--- 368 (495)
T ss_dssp -GGGCCBSSCCCCSSC-SS--TTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHH---TTCCSS--TT---
T ss_pred -cccccccccccCCCc-cC--CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhh---cCCcCc--cc---
Confidence 111222211111110 00 1124556555432 222 2799999999988999877653 222221 00
Q ss_pred CCCCccceeEEecCCCcEEEEEEE-cCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC-CcEEE
Q 007633 425 SRAPKVDTSLINGTYKGFMEIIFQ-NNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP-GAWTA 502 (595)
Q Consensus 425 ~~~~~~~~~v~~~~~g~~ve~vi~-N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p-~g~~~ 502 (595)
.....+++.++.|++|||+|+ |.....||||||||+|+||+++. ...+|+.+|++|||+.|++ |+|++
T Consensus 369 ---~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~P~~rDtv~v~~~g~~~~ 438 (495)
T 3t6v_A 369 ---LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESAS-------NSTSNYDDPIWRDVVSIGGVGDNVT 438 (495)
T ss_dssp ---SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCSTTCEEE
T ss_pred ---ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCC-------CCCcccCCCCCccEEEcCCCCcEEE
Confidence 111345788999999999999 66678899999999999998742 2358999999999999997 89999
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCcc
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLS 556 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~ 556 (595)
|||++||||.|+|||||++|++.||++.| +..++..++..++|++ ...|..++
T Consensus 439 irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 439 IRFCTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp EEEECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred EEEEcCCCeeEEEEecchhHhhcCCeEEE-EEChhHhccccCCCHHHHHHhhHhh
Confidence 99999999999999999999999999877 4555544333445654 56887653
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-95 Score=791.10 Aligned_cols=479 Identities=25% Similarity=0.378 Sum_probs=371.4
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC-----CceeeeCCccCCCCCCCCCCCC-C
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-----PLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
..|+|++++..++|||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999889999999999999999999999999987541 2234333567899999999975432
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~ 264 (595)
.+.....+|.++|||++.++|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDS-----VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCT-----TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCC-----CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 22233478999999999876632 234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 265 ~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
++++.|+|||||||+|++++++| +|||++.....+.. .......|+|+|.++...... .+..+. .. .+.
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~p~-~~~~~~---~~-~~~---- 301 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPT-TNQTTS---VK-PLN---- 301 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSCCC-CCCCCC---SS-BCC----
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCCCC-CCCCCC---Cc-ccc----
Confidence 99999999999999999998778 99999987543221 122345799999875421110 010010 00 000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~ 424 (595)
..++.+....+.|.. . ....+++++.+... .++ .+|+|||++|..++.|++++.+ .+.+.. .+
T Consensus 302 -~~~L~p~~~~~~p~~-~--~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~---~g~~~~--~~--- 364 (499)
T 3pxl_A 302 -EVDLHPLVSTPVPGA-P--SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQIL---SGAQTA--QD--- 364 (499)
T ss_dssp -GGGCCBSSCCCCSSC-S--STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHH---TTCCST--TT---
T ss_pred -cccccccccccCCCc-c--cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhh---cCCccc--cc---
Confidence 012222211111110 0 01134566655432 222 2799999999988999887653 222221 00
Q ss_pred CCCCccceeEEecCCCcEEEEEEE---cCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC---C
Q 007633 425 SRAPKVDTSLINGTYKGFMEIIFQ---NNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP---G 498 (595)
Q Consensus 425 ~~~~~~~~~v~~~~~g~~ve~vi~---N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p---~ 498 (595)
.....+++.++.|++|||+|+ |.....||||||||+|+||+.+. ...||+.+|++|||+.|++ +
T Consensus 365 ---~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~pg 434 (499)
T 3pxl_A 365 ---LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAAG 434 (499)
T ss_dssp ---SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGGT
T ss_pred ---cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCCC
Confidence 111345788999999999999 55667899999999999998642 2358999999999999997 9
Q ss_pred cEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCccCCCc
Q 007633 499 AWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLSSLQK 560 (595)
Q Consensus 499 g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~~~~~ 560 (595)
+|++|||++||||.|+|||||++|++.||++.| +..++..++..++|++ ...|..++..+.
T Consensus 435 ~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~~~~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 435 DNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVKAVNPVPQAWSDLCPTYDALDP 496 (499)
T ss_dssp CEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHHHHSCCCHHHHTHHHHHHTSCG
T ss_pred cEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHhccccCCCHHHHHhhhHhhccCc
Confidence 999999999999999999999999999999877 5666655333345654 679988877643
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-95 Score=798.24 Aligned_cols=485 Identities=21% Similarity=0.289 Sum_probs=373.1
Q ss_pred CCCeEEEEEEEEEEEecCCCe-eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVTASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDG 101 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~-~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DG 101 (595)
++...+|+|++++.++++||+ .+++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++++++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 345678999999999999999 999999999999999999999999999999999 99999999999999999999
Q ss_pred CCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHH
Q 007633 102 VLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKK 179 (595)
Q Consensus 102 v~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~ 179 (595)
+++ |||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+++||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 998 99999999999999997789999999999999999999999999987531 2234333479999999999987665
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcc
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSY 259 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~ 259 (595)
+.. ..+...+.+|.++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 532 122334668999999999876631 12345899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 007633 260 TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM 339 (595)
Q Consensus 260 ~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~ 339 (595)
++|..++++.|+|||||||+|++++.+| +|||++........ .......++|+|.+.....+ .+......+ +
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~p--~~~~~~~~~----~ 325 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAEP--TTSQNSGTA----L 325 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCCC--CCCCCCSCB----C
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCCC--CCCCCcccc----c
Confidence 9999999999999999999999998777 99999987643221 11123469999987543211 110000001 1
Q ss_pred ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCe-EEEEecCeecCCCCCcHhhhhhcCCCCccccC
Q 007633 340 NQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK-WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLD 418 (595)
Q Consensus 340 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~ 418 (595)
+. .++.+....+.|.... ....++++.+.. ..++. .+|+|||++|..+..|++++.+. +.++.
T Consensus 326 ~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~----~~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~- 389 (521)
T 1v10_A 326 NE-----ANLIPLINPGAPGNPV---PGGADINLNLRI----GRNATTADFTINGAPFIPPTVPVLLQILS---GVTNP- 389 (521)
T ss_dssp CG-----GGCCBSSCCCCSSCSS---TTCSSEEEECCE----ECCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG-
T ss_pred ch-----hhcccCCcccCCCccc---CCcceEEEEEEE----ecCCceeEEEECCCcccCCCCchhhhhhc---CCccc-
Confidence 10 1122221122221100 012345554432 12332 47999999999888888765432 22210
Q ss_pred CCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEe-CC
Q 007633 419 FPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FP 497 (595)
Q Consensus 419 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-~p 497 (595)
. ....+.+++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| +|
T Consensus 390 -~------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 390 -N------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp -G------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBS
T ss_pred -c------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCC
Confidence 0 01124567889999999999999 6789999999999999997653 378899999999999 89
Q ss_pred CcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCC-ccccccCccCCC
Q 007633 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPD-NAIYCGLLSSLQ 559 (595)
Q Consensus 498 ~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~-~~~~c~~~~~~~ 559 (595)
++|++|||++||||.|+|||||++|++.|||..|.|...+ .++..++|+ +...|..++...
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~-~~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN-IPIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG-HHHHSCCCHHHHTHHHHHTTCC
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc-hhhccCCChHHhhhchhhhccC
Confidence 9999999999999999999999999999999999875433 333445564 578999987763
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-93 Score=776.82 Aligned_cols=478 Identities=26% Similarity=0.402 Sum_probs=370.6
Q ss_pred EEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 33 FYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.|+|++++.++++||.++++|+|||++ ||+|++++||+|+|+|+|+|+ ++++|||||+++++++|+||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999998999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHHh
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~ 185 (595)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|...++|++|+++||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997789999999999999999999999999987532 2334333479999999999987654321
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeee
Q 007633 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNY 265 (595)
Q Consensus 186 ~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~ 265 (595)
.+.+|.++|||++.+.|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..+
T Consensus 162 ----~~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGP-----AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTCC-----CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCCC-----CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 1468999999999877632 2345899999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC---CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccc
Q 007633 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS---EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQA 342 (595)
Q Consensus 266 d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~ 342 (595)
+++.|+|||||||+|++++++| +|||++........ ........++|+|.++....+. .+..+... .++.
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~----~l~~- 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPA----QLNE- 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCC----BCCG-
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccC----CCcc-
Confidence 9999999999999999998777 89999976532211 0111234699999875421110 00011100 1111
Q ss_pred cccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCC
Q 007633 343 RSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYK 422 (595)
Q Consensus 343 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~ 422 (595)
.++.+....+.|.... ....++++.+.. ..++. +|+|||++|..+..|++++.+ .+.++.
T Consensus 306 ----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~----~~~~~-~~~iNg~~~~~~~~P~l~~~~---~g~~~~----- 365 (503)
T 1hfu_A 306 ----ADLHALIDPAAPGIPT---PGAADVNLRFQL----GFSGG-RFTINGTAYESPSVPTLLQIM---SGAQSA----- 365 (503)
T ss_dssp ----GGCBBSSSCSCSSCSS---TTCSSEEEECCE----EEETT-EEEETTBCCCCCSSCHHHHHH---TTCCSG-----
T ss_pred ----ccccccCccCCCCccc---CCcceEEEEEEe----eccCc-eEEECCCccCCCCCcchhhhh---cCCccc-----
Confidence 1122221112221100 012334444332 11233 799999999988888876653 222210
Q ss_pred CCCCCCccceeEEecCCCcEEEEEEEc-CCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEe-CCCcE
Q 007633 423 LMSRAPKVDTSLINGTYKGFMEIIFQN-NDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FPGAW 500 (595)
Q Consensus 423 p~~~~~~~~~~v~~~~~g~~ve~vi~N-~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-~p~g~ 500 (595)
. ....+..++.++.|++|||+++| ...+.||||||||+||||+++.+. .+|+.+|.|||||.| +|++|
T Consensus 366 -~--~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~ 435 (503)
T 1hfu_A 366 -N--DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDE 435 (503)
T ss_dssp -G--GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCE
T ss_pred -c--cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCce
Confidence 0 11224578889999999999995 446789999999999999997653 378889999999999 99999
Q ss_pred EEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCC-CccccccCccCCCcc
Q 007633 501 TAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLP-DNAIYCGLLSSLQKD 561 (595)
Q Consensus 501 ~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p-~~~~~c~~~~~~~~~ 561 (595)
++|||++||||.|+|||||++|++.|||..|.|...+ .++..++| ++...|+.++..+..
T Consensus 436 v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~-~~~~~~~p~~~~~~C~~~~~~~~~ 496 (503)
T 1hfu_A 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN-TVDANNPPVEWAQLCEIYDDLPPE 496 (503)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH-HHHHCCCCHHHHHHHHHHHTCCHH
T ss_pred EEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh-hhhccCCChHHhhhccchhhcCCc
Confidence 9999999999999999999999999999999875433 22344566 457899999877443
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-92 Score=778.25 Aligned_cols=488 Identities=21% Similarity=0.301 Sum_probs=375.8
Q ss_pred cCCCeEEEEEEEEEEE--ecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVT--ASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~--~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv 102 (595)
+.+.+++|+|++++.+ +.+||+. +++|+|||++|||+|+|++||+|+|+|+|+| +++++|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3456899999999999 8999999 9999999999999999999999999999999 6899999999999989999999
Q ss_pred CC-CCCccCC-CCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCce-eEeeeccccccHHH
Q 007633 103 LG-TNCPIPA-GWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDI-TIFISDWYTKSHKK 179 (595)
Q Consensus 103 ~~-tq~~I~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~ 179 (595)
++ |||||+| |++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHH
Confidence 98 9999999 9999999999 5899999999999999999999999998764 233 7887 99999999998776
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcc
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSY 259 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~ 259 (595)
+..... ....+.++.++|||+..++|.. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~~~~~-----~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 256 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVNPNTG-----EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVP 256 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBCTTTC-----CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEE
T ss_pred Hhhhhh-cCCCCccceeEECCccccCcCC-----CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcc
Confidence 643332 2234668999999999866532 2346899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEee--cccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCC--CCCc
Q 007633 260 TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASP--RFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPN--AYDT 335 (595)
Q Consensus 260 ~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~--~~~~ 335 (595)
++|..++++.|+|||||||+|++++.+| +|||++.. ...+. ........++|+|.++... +|..+. ..+.
T Consensus 257 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~ 330 (559)
T 2q9o_A 257 VNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPTDEGTPPVDH 330 (559)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCCCCCCCCCCC
T ss_pred cCceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCCCCCCcCCCc
Confidence 9999999999999999999999998777 99999986 32111 1123456899999865421 121110 0010
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCC-CCCcHhhhhhcCCCCc
Q 007633 336 YFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLP-PSTPLMLAQQFNIPGA 414 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~-~~~P~~~~~~~~~~~~ 414 (595)
. ..+. ..+.+..+.+.|...+. ...++++.+.... ..++...|+|||++|.. +..|++...+.+. ..
T Consensus 331 ~-~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-~~ 398 (559)
T 2q9o_A 331 Q-CLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILTGN-TS 398 (559)
T ss_dssp T-TCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC-CC
T ss_pred c-cccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhcCC-cc
Confidence 0 1111 11222111112221110 1112334433211 12345789999999964 5678765433211 01
Q ss_pred cccCCCCCCCCCCCccceeEEecCC-CcEEEEEEEcCC----CccceeeecCceEEEEEEeC---------CccCCC-CC
Q 007633 415 YKLDFPYKLMSRAPKVDTSLINGTY-KGFMEIIFQNND----TTVQSYHMDGYAFFVVGMDF---------GVWTEN-SR 479 (595)
Q Consensus 415 ~~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vi~N~~----~~~HP~HlHG~~F~Vl~~g~---------G~~~~~-~~ 479 (595)
| + .+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++. +.
T Consensus 399 ~-------~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~ 465 (559)
T 2q9o_A 399 Y-------P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDL 465 (559)
T ss_dssp C-------C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHG
T ss_pred C-------C------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccc
Confidence 1 1 1345666654 688999999976 67899999999999999988 777653 13
Q ss_pred CCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCC--CC-ccccccCcc
Q 007633 480 GTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLL--PD-NAIYCGLLS 556 (595)
Q Consensus 480 ~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~--p~-~~~~c~~~~ 556 (595)
..+|+.+|+|||||.|++++|++|||++||||.|||||||++|++.|||+.|.|... ..++..++ |+ ....|+.++
T Consensus 466 ~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 466 ARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-DLRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-HHGGGCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-hhhhccccCCchhhhhhccccc
Confidence 458999999999999999999999999999999999999999999999998877533 23333444 54 567999886
Q ss_pred CC
Q 007633 557 SL 558 (595)
Q Consensus 557 ~~ 558 (595)
..
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-84 Score=698.66 Aligned_cols=403 Identities=20% Similarity=0.280 Sum_probs=326.1
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
..+++++|+|++++..++++|.++++|+|||++|||+|+|++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45568999999999999999999999999999999999999999999999999999999999999875 5999987
Q ss_pred CccCCCCeEEEEEEEC-CceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH---
Q 007633 107 CPIPAGWNWTYQFQVK-DQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK--- 178 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~--- 178 (595)
++|+||++|+|+|+++ +++||||||||. +.|+++||+|+|||+++.+.. +....++|++++++||+++...
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999986 589999999996 589999999999999875321 1113488999999999987531
Q ss_pred --HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeec
Q 007633 179 --KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256 (595)
Q Consensus 179 --~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~D 256 (595)
... .. .| ..++.++|||+.. |.++|++| +|||||+|+|..+.+.|+|+||+|+||++|
T Consensus 166 ~~~~~-~~-~g---~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~D 225 (439)
T 2xu9_A 166 HTPMD-WM-NG---KEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAAD 225 (439)
T ss_dssp CCHHH-HH-HC---CCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEET
T ss_pred CCccc-cc-cC---CCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecC
Confidence 010 00 11 3468999999987 88999999 999999999999999999999999999999
Q ss_pred Ccce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC--------------CCCCcceEEEEEecCCCCC
Q 007633 257 GSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS--------------EWNKVTGVAILHYSNSLGP 321 (595)
Q Consensus 257 G~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~--------------~~~~~~~~ail~y~~~~~~ 321 (595)
|.++ +|..++++.|+|||||||+|++++ +| +|+|++........ ........++++|.+...
T Consensus 226 G~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 302 (439)
T 2xu9_A 226 GGFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK- 302 (439)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-
T ss_pred CCCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-
Confidence 9998 799999999999999999999997 77 89999865322110 001235678889976431
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCC
Q 007633 322 ASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPST 401 (595)
Q Consensus 322 ~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~ 401 (595)
..++|... ..... + +.+ ..+|++.+.... .+ ..|+|||++|.++..
T Consensus 303 -~~~~p~~l---------~~~~~----l------~~~---------~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~ 348 (439)
T 2xu9_A 303 -PLPLPKAL---------SPFPT----L------PAP---------VVTRRLVLTEDM----MA-ARFFINGQVFDHRRV 348 (439)
T ss_dssp -CCCCCSCC---------CCCCC----C------CCC---------SEEEEEEEEEEG----GG-TEEEETTBCCCTTCC
T ss_pred -cccCcccC---------CCccc----C------CCC---------CcceEEEEEeec----cC-ceEeECCEECCCCCC
Confidence 11222211 00000 0 111 124677765421 11 379999999854211
Q ss_pred cHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCC
Q 007633 402 PLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGT 481 (595)
Q Consensus 402 P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~ 481 (595)
+ +.++.|++++|+|+|.+.+.||||||||+||||+++.+.+
T Consensus 349 ~--------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~------- 389 (439)
T 2xu9_A 349 D--------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF------- 389 (439)
T ss_dssp C--------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC-------
T ss_pred c--------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC-------
Confidence 1 3578899999999999889999999999999999976543
Q ss_pred CCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 482 YNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 482 ~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||..++|.
T Consensus 390 ---~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ---PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999873
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-84 Score=696.89 Aligned_cols=407 Identities=16% Similarity=0.162 Sum_probs=322.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 30 PYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
.+++|+|++++.++++ +|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++..+ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999998 799999999999999999999999999999999999999999999998754 99998 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ..++|++|+++||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996569999999997 7899999999999999765333222 25889999999999975543221
Q ss_pred HHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcce-
Q 007633 183 DVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSYT- 260 (595)
Q Consensus 183 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~~- 260 (595)
...+.....+|.++|||+.. |.++|++| +|||||+|+|..+.+.|+| |||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11222345689999999997 88999999 9999999999999999999 899999999999998
Q ss_pred eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC-------CCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 007633 261 VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS-------EWNKVTGVAILHYSNSLGPASGPLPDPPNAY 333 (595)
Q Consensus 261 ~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~ 333 (595)
+|..++++.|+|||||||+|++++ ++ +|||++........ ........++++|........ +....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~-- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM-- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc--
Confidence 799999999999999999999995 56 99999866432110 011133457888875431110 0000010
Q ss_pred CcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCC
Q 007633 334 DTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPG 413 (595)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~ 413 (595)
.+.+....+. ....++++.|. + .|+|||++|..+..
T Consensus 312 --------------~L~~~~~~~~--------~~~~~~~~~l~--------~--~~~iNg~~f~~~~~------------ 347 (451)
T 2uxt_A 312 --------------RLLPTEIMAG--------SPIRSRDISLG--------D--DPGINGQLWDVNRI------------ 347 (451)
T ss_dssp --------------CSSSSCCCCC--------CCSEEEEEEEC--------S--SSSBTTBCCCTTCC------------
T ss_pred --------------ccCCCCCCCC--------CCcceEEEEEe--------e--EEEECCEeCCCCCC------------
Confidence 0111100000 12345666553 1 59999999854211
Q ss_pred ccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEE
Q 007633 414 AYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTT 493 (595)
Q Consensus 414 ~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv 493 (595)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.|||||
T Consensus 348 --------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDTv 397 (451)
T 2uxt_A 348 --------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDTV 397 (451)
T ss_dssp --------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSEE
T ss_pred --------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccEE
Confidence 13568899999999997 68999999999999999632 2566789999999
Q ss_pred EeCCCcEEEEEEEecCcce----eEEeeccccceeccceEEEEEecCC
Q 007633 494 QVFPGAWTAILVYLDNAGI----WNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 494 ~v~p~g~~~irf~adNPG~----W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
.| +++++|+|++||||. |||||||++|++.|||..|+|...+
T Consensus 398 ~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 398 WV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99 999999999999988 9999999999999999999998665
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-82 Score=693.30 Aligned_cols=421 Identities=15% Similarity=0.162 Sum_probs=326.1
Q ss_pred eEEEEEEEEEEE--ecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 31 YVFYDWTISYVT--ASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 31 ~~~~~l~~~~~~--~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
+++|+|++++.. +.+||..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. .++||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CCC
Confidence 578999999654 6788989999999999999999999999999999999999999999999886 4799986 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCCCCCCC--CCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIPLPFAV--PDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++.+++||||||||.. .|+++||+|+|||++++....+++. .+.|++|+|+||+++...++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999965689999999974 5889999999999998765444432 3678999999999875443211
Q ss_pred HHhCCC-CCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeC-------CceeEEe
Q 007633 183 DVENGV-DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN-------HNLLLVE 254 (595)
Q Consensus 183 ~~~~g~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~g-------h~~~via 254 (595)
..+. ....+|.++|||+.. +.++|++ ++|||||||+|..+.+.|+|++ |+|+||+
T Consensus 192 --~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 192 --TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp --CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred --cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 1121 234579999999997 7899998 5999999999999999999987 9999999
Q ss_pred ecCcc-eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc-CCC-CCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 007633 255 TEGSY-TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV-NSS-EWNKVTGVAILHYSNSLGPASGPLPDPPN 331 (595)
Q Consensus 255 ~DG~~-~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~lp~~p~ 331 (595)
+||.+ .+|..++++.|+|||||||+|++++.+|++|+|++..... +.. ........++++|.....+.. +. +
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~---~~-~- 329 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ---PD-T- 329 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC---SC-C-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC---CC-C-
Confidence 99985 5799999999999999999999998777579999854211 100 001123458899975432100 00 0
Q ss_pred CCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCC
Q 007633 332 AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI 411 (595)
Q Consensus 332 ~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~ 411 (595)
.. .+..+.+. +.|.+. ...++++.+... ...|+|||++|.++..|.+
T Consensus 330 ------~~-----~P~~L~~~-~~p~~~-------~~~~~~~~~~~~-------~~~w~iNG~~f~~~~~p~l------- 376 (534)
T 3abg_A 330 ------SV-----VPANLRDV-PFPSPT-------TNTPRQFRFGRT-------GPTWTINGVAFADVQNRLL------- 376 (534)
T ss_dssp ------CC-----CCCCCCCC-SCCCCC-------CCCCEEEECSCC-------CSTTCCCCBTTBCTTSCCC-------
T ss_pred ------CC-----CccccccC-CCCCCc-------cccceEEEEecc-------CceeEECCcccCCCCCcce-------
Confidence 00 00011110 011111 134566665421 1369999999965433321
Q ss_pred CCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcc
Q 007633 412 PGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVAR 490 (595)
Q Consensus 412 ~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~r 490 (595)
+.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .||
T Consensus 377 -----------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~r 429 (534)
T 3abg_A 377 -----------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLK 429 (534)
T ss_dssp -----------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCB
T ss_pred -----------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCc
Confidence 246789999999999875 589999999999999997664421 1245556 899
Q ss_pred cEEEeCCCcEEEEEEE-ecCcceeEEeeccccceeccceEEEEEecCC
Q 007633 491 STTQVFPGAWTAILVY-LDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 491 DTv~v~p~g~~~irf~-adNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
|||.|+|++|++|||+ +||||.|+|||||++|++.|||..|+|...+
T Consensus 430 DTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 430 DVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999999999999998 8999999999999999999999999998776
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-81 Score=683.80 Aligned_cols=428 Identities=17% Similarity=0.193 Sum_probs=323.3
Q ss_pred CeEEEEEEEEEEEecC--CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC----------------------Cce
Q 007633 30 PYVFYDWTISYVTASP--LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE----------------------PLL 85 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~----------------------~~~ 85 (595)
...+|+|++++.+... ++..+++|+|||++|||+|+|++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 4566999999988654 4578999999999999999999999999999999986 899
Q ss_pred eeeCCccCCCCCCCCCCCC---CCCccCCCCeE---EEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCC
Q 007633 86 LTWNGVQHRKNSWQDGVLG---TNCPIPAGWNW---TYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIP 155 (595)
Q Consensus 86 iH~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 155 (595)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 68999984 89999999555 99999866799999999974 58999999999999987644
Q ss_pred CCCCCCCCceeEeeeccccccHHHHHHHHh-----------CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEec
Q 007633 156 LPFAVPDGDITIFISDWYTKSHKKLRKDVE-----------NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEP 224 (595)
Q Consensus 156 ~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~-----------~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~ 224 (595)
.+++..++|++|+|+||+++...++..... .......+|.++|||+.+ +.++|++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP 247 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecC
Confidence 444456889999999999875533211110 001234679999999998 7899988
Q ss_pred CcEEEEEEEEeCCCceeeEEEeCC-ceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC
Q 007633 225 GKTYRLRVHNVGISTSLNFRIQNH-NLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS 302 (595)
Q Consensus 225 G~~~rlRliNag~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~ 302 (595)
+ +|||||||+|..+.+.|+|+|| +|+||++||.++ +|..++++.|+|||||||+|++++.+|..+.++.... +..
T Consensus 248 ~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~--~~~ 324 (513)
T 2wsd_A 248 R-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAG--CGG 324 (513)
T ss_dssp S-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCC--SSS
T ss_pred C-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccc--ccc
Confidence 5 8999999999999999999999 999999999998 7999999999999999999999987773344433221 101
Q ss_pred CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccc
Q 007633 303 EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL 382 (595)
Q Consensus 303 ~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~ 382 (595)
........++++|..+...........|. .+.. .. ..+. .....+|++.|.... .
T Consensus 325 ~~~~~~~~~il~~~~~~~~~~~~~~~~p~------~l~~---~~-------~~~~-------~~~~~~~~~~l~~~~--~ 379 (513)
T 2wsd_A 325 DVNPETDANIMQFRVTKPLAQKDESRKPK------YLAS---YP-------SVQH-------ERIQNIRTLKLAGTQ--D 379 (513)
T ss_dssp SCCTTTTTEEEEEECCSCCSSCCCCCCCS------BCSC---CG-------GGCC-------CCEEEEEEEEEEEEE--C
T ss_pred cCCCCCCcceEEEEeccCcccCccCCCCc------cccC---CC-------Cccc-------CCCcceEEEEEEeec--C
Confidence 11112345789997543111000000110 0100 00 0000 012345666665422 2
Q ss_pred cCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCc
Q 007633 383 IEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGY 462 (595)
Q Consensus 383 ~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~ 462 (595)
..+...|+|||++|..+ . .+.++.|++++|+|+|.+.+.||||||||
T Consensus 380 ~~g~~~~~iNg~~~~~~---~------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~ 426 (513)
T 2wsd_A 380 EYGRPVLLLNNKRWHDP---V------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLV 426 (513)
T ss_dssp TTSCEEEEETTBCTTSC---C------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSC
T ss_pred CCCCceEeECCccCCCc---c------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCc
Confidence 23556799999988431 0 12457899999999999888999999999
Q ss_pred eEEEEEEeCC---ccCCCCCCCCCCC---------CCCcccEEEeCCCcEEEEEEEe-cCcceeEEeeccccceeccceE
Q 007633 463 AFFVVGMDFG---VWTENSRGTYNKW---------DGVARSTTQVFPGAWTAILVYL-DNAGIWNLRAENLDTWYLGQEV 529 (595)
Q Consensus 463 ~F~Vl~~g~G---~~~~~~~~~~n~~---------~p~~rDTv~v~p~g~~~irf~a-dNPG~W~~HCHil~H~~~GM~~ 529 (595)
+||||+++.+ .|++.. .+++. ++.|||||.|+|++++.|+|++ ||||.|+|||||++|++.|||.
T Consensus 427 ~F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~ 504 (513)
T 2wsd_A 427 SFRVLDRRPFDIARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMR 504 (513)
T ss_dssp CEEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEE
T ss_pred eEEEEEecCcccccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCce
Confidence 9999999752 333221 12332 3469999999999999999999 8999999999999999999999
Q ss_pred EEEEecC
Q 007633 530 YVNVINP 536 (595)
Q Consensus 530 ~~~V~~~ 536 (595)
.++|..+
T Consensus 505 ~~~V~~~ 511 (513)
T 2wsd_A 505 PMDITDP 511 (513)
T ss_dssp EEEEBCC
T ss_pred eEEEeCC
Confidence 9999754
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-80 Score=665.81 Aligned_cols=415 Identities=18% Similarity=0.189 Sum_probs=317.0
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
..+.+++++|+|++++.++++ +|..+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++ ++++||++
T Consensus 44 ~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p 121 (481)
T 3zx1_A 44 ESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP 121 (481)
T ss_dssp CCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT
T ss_pred cccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc
Confidence 345678899999999999987 699999999999999999999999999999999999999999999987 47899997
Q ss_pred CCCCccCCCCeEEEEEEECCc-eeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH
Q 007633 104 GTNCPIPAGWNWTYQFQVKDQ-IGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK 178 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~ 178 (595)
||+|+||++|+|+|+++++ +||||||||. +.|+++||+|+|||+++++...++ ++++ ++++||+++...
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999999643 8999999995 689999999999999987643333 4455 999999987543
Q ss_pred HHHH-HHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecC
Q 007633 179 KLRK-DVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEG 257 (595)
Q Consensus 179 ~l~~-~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG 257 (595)
++.. ..........+|.++|||+.. |.++|++|+ ||||||+|..+.+.|+|+||+|+||++||
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DG 259 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDG 259 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETT
T ss_pred ccccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCC
Confidence 3210 000000123578999999987 899999998 99999999999999999999999999998
Q ss_pred cce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCC-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCc
Q 007633 258 SYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNSLGPASGPLPDPPNAYDT 335 (595)
Q Consensus 258 ~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~ 335 (595)
.++ +|..++++.|+|||||||+|++++ ++ .|.+++......... ........+++..... .+.++|...
T Consensus 260 g~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~~l----- 330 (481)
T 3zx1_A 260 GLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPKNL----- 330 (481)
T ss_dssp EEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCSCS-----
T ss_pred CccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCccc-----
Confidence 766 799999999999999999999984 55 799887543221000 0112233344443222 111222210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEeccccc--cc--CCe--------EEEEecCeecCCCCCcH
Q 007633 336 YFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAE--LI--EGK--------WRTTLNGISYLPPSTPL 403 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~--~~--~g~--------~~~~iNg~sf~~~~~P~ 403 (595)
.+....+. ...+|++.|...... .. .+. ..|+|||+.|.+. .
T Consensus 331 --------------~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~-- 384 (481)
T 3zx1_A 331 --------------KIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-R-- 384 (481)
T ss_dssp --------------CCCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-C--
T ss_pred --------------cCCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-C--
Confidence 00000111 124566666432100 00 001 1399999887421 1
Q ss_pred hhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEe-CCccCCCCCCCC
Q 007633 404 MLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMD-FGVWTENSRGTY 482 (595)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g-~G~~~~~~~~~~ 482 (595)
..+.++.|++|+|+|.|.+.+.|||||||+.|+|+++. .|.- .
T Consensus 385 -----------------------------~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~-------~ 428 (481)
T 3zx1_A 385 -----------------------------IDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKV-------Q 428 (481)
T ss_dssp -----------------------------CCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEE-------E
T ss_pred -----------------------------ceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCC-------C
Confidence 12467899999999999989999999999999999983 2321 1
Q ss_pred CCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 483 NKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 483 n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
...++.|||||.|+|+++++|+|++||||.|+||||+++|++.|||..++|.
T Consensus 429 ~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1235789999999999999999999999999999999999999999999996
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-80 Score=664.33 Aligned_cols=385 Identities=17% Similarity=0.253 Sum_probs=301.8
Q ss_pred EEEcCC-CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEc
Q 007633 53 IGINGQ-FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYF 131 (595)
Q Consensus 53 ~~~Ng~-~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH 131 (595)
|+|||+ +|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 67999997 9999999999999997689999999
Q ss_pred cC----cchhhhcCceeeEEEeccCCCCCCCCCCC-CceeEeeeccccccHHHHHHH--HhCCCCCCCCCeEEEcCCCCC
Q 007633 132 PS----LDFQRAAGGYGGIIINNRDVIPLPFAVPD-GDITIFISDWYTKSHKKLRKD--VENGVDLGVPDGILINGLGPY 204 (595)
Q Consensus 132 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~l~~~--~~~g~~~~~~d~~liNG~~~~ 204 (595)
|| ++.|+++||+|+|||++++.. .+++ +| +|++|+++||+++. .++... ...+.....+|.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999998764 2222 25 89999999999976 432110 00011124679999999997
Q ss_pred CCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE--eC---CceeEEeecCccee-eeeeeEEEEeccceEEE
Q 007633 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI--QN---HNLLLVETEGSYTV-QQNYTNMDIHVGQSFSF 278 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~l~i~pGqR~dv 278 (595)
+.++|++| +|||||||+|..+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEeCCCCCcceEEEEeecccCCC----------CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 007633 279 LVTTDQNASSDYYIVASPRFVNSS----------EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWN 348 (595)
Q Consensus 279 lv~~~~~~g~~y~i~a~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ 348 (595)
+|++++ + .|||++.......+ ........++++|.+.....+ |. .+.. ++
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~------~L~~---lp-- 305 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE------ALSD---PP-- 305 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC------CCSC---CC--
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc------ccCC---CC--
Confidence 999983 4 89999876432111 011234567788865432111 11 0100 00
Q ss_pred cccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCC
Q 007633 349 VSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428 (595)
Q Consensus 349 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~ 428 (595)
..+. ....++++.|... ...|+|||++|..+ .|.
T Consensus 306 -----~~~~--------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------- 339 (448)
T 3aw5_A 306 -----PEPP--------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------- 339 (448)
T ss_dssp -----CCCC--------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT-------------------------
T ss_pred -----CCCC--------CCCceEEEEEeCC-------CceeeECCCcCCCC-CCc-------------------------
Confidence 0011 1235677777541 12599999998532 111
Q ss_pred ccceeEEe-cCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCC-CCCCCCC----CCCCCcccEEEeCCCcEE
Q 007633 429 KVDTSLIN-GTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTE-NSRGTYN----KWDGVARSTTQVFPGAWT 501 (595)
Q Consensus 429 ~~~~~v~~-~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~-~~~~~~n----~~~p~~rDTv~v~p~g~~ 501 (595)
+. ++.|++++|+|+|.+ .+.||||||||+||||+++ |.+.. .+...++ ..++.|||||.|+|++++
T Consensus 340 ------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~ 412 (448)
T 3aw5_A 340 ------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETV 412 (448)
T ss_dssp ------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEE
T ss_pred ------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEE
Confidence 13 578999999999998 7899999999999999995 54431 1122233 234579999999999999
Q ss_pred EEE--EE---ecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AIL--VY---LDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~ir--f~---adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+|+ |+ +||| |+|||||++|++.|||..|+|.
T Consensus 413 ~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 413 KIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 665 88 8999 9999999999999999999873
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-78 Score=682.65 Aligned_cols=461 Identities=15% Similarity=0.087 Sum_probs=311.3
Q ss_pred CCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCC-----------------------
Q 007633 29 DPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEP----------------------- 83 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~----------------------- 83 (595)
...+.|++++++.+.+ +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3457788888887765 456778999999999999999999999999999999765
Q ss_pred ------------------ceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc----chhhhcC
Q 007633 84 ------------------LLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAG 141 (595)
Q Consensus 84 ------------------~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~G 141 (595)
++|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999774 6899986 99999999999999996668999999995 6899999
Q ss_pred ceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHH--H------------hCC---CCCCCCCeEEEcCCCCC
Q 007633 142 GYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKD--V------------ENG---VDLGVPDGILINGLGPY 204 (595)
Q Consensus 142 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~--~------------~~g---~~~~~~d~~liNG~~~~ 204 (595)
|+|+|||+++++...+.+.+++|++|+|+||+++...++... + ..+ .....++.++|||+..
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 999999999876555556779999999999998754322110 0 000 1123468899999987
Q ss_pred CCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC-------ceeEEeecCccee-eeee------eEEEE
Q 007633 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH-------NLLLVETEGSYTV-QQNY------TNMDI 270 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~------d~l~i 270 (595)
+.+.+++ ++|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.+ ++|.|
T Consensus 265 -------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i 330 (612)
T 3gyr_A 265 -------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEe
Confidence 8888876 58999999999999999999998 4999999999984 6554 48999
Q ss_pred eccceEEEEEEeCCCCCcceEEEEeecccCCCC---CCCcceEEEEEecCCCCC--CCCCCCCCCCCCCccccccccccc
Q 007633 271 HVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE---WNKVTGVAILHYSNSLGP--ASGPLPDPPNAYDTYFSMNQARSI 345 (595)
Q Consensus 271 ~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~---~~~~~~~ail~y~~~~~~--~~~~lp~~p~~~~~~~~~~~~~~~ 345 (595)
+|||||||+|++++.++..|+++.......... ........+++|...... ....+|...........
T Consensus 331 ~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------- 403 (612)
T 3gyr_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMS------- 403 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCC-------
T ss_pred ccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccc-------
Confidence 999999999999987773444444322111110 112334456666543321 11112221100000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecccc-cccCCeEEEEecCeecC-CCCCcHhhhhh-cCCCC-ccccCCCC
Q 007633 346 RWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA-ELIEGKWRTTLNGISYL-PPSTPLMLAQQ-FNIPG-AYKLDFPY 421 (595)
Q Consensus 346 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~~~iNg~sf~-~~~~P~~~~~~-~~~~~-~~~~~~~~ 421 (595)
...+ ...+...+..... ........|.++..... ....+...... ....+ .+.
T Consensus 404 ---------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 460 (612)
T 3gyr_A 404 ---------HDIP---------HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKT----- 460 (612)
T ss_dssp ---------TTSC---------CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEE-----
T ss_pred ---------cccc---------cccccccccccccccccccccccccccccccccccccccceeeeccCCCcccc-----
Confidence 0000 0001111110000 00000111111111100 00000000000 00000 000
Q ss_pred CCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCC----------------CCCCCCC
Q 007633 422 KLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENS----------------RGTYNKW 485 (595)
Q Consensus 422 ~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~----------------~~~~n~~ 485 (595)
...++..+.+...+.++.|++|+|+|+|.+.+.||||||||+||||+++.+.+.... ....+..
T Consensus 461 ~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (612)
T 3gyr_A 461 YRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPN 540 (612)
T ss_dssp EEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTT
T ss_pred ccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccc
Confidence 000111122233457789999999999999999999999999999998754433211 1234567
Q ss_pred CCCcccEEEeCCCcEEEEEEE-ecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 486 DGVARSTTQVFPGAWTAILVY-LDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 486 ~p~~rDTv~v~p~g~~~irf~-adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
++.|||||.|++++|++|||+ +||||.|+|||||++|||+|||..|+|++|+.
T Consensus 541 ~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 541 ELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 789999999999999999998 79999999999999999999999999998864
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-78 Score=649.54 Aligned_cols=417 Identities=19% Similarity=0.243 Sum_probs=309.0
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
+..+.|+|++++.+++++|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 345789999999999999999999999999999999999999999999999999999999999886 5799997 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ...+|++++|+||+++.+.++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 6899999999999999765333332 23569999999999975433211
Q ss_pred HHh--CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcc
Q 007633 183 DVE--NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSY 259 (595)
Q Consensus 183 ~~~--~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~ 259 (595)
..+ .......+|.++|||+.+ |.+.+ +|++|||||||+|..+.+.|+| +||+|+||++||.+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000124579999999987 66766 6689999999999999999999 69999999999998
Q ss_pred e-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCccc
Q 007633 260 T-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEW-NKVTGVAILHYSNSLGPASGPLPDPPNAYDTYF 337 (595)
Q Consensus 260 ~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~ 337 (595)
+ +|..++++.|+|||||||+|++++ .+ .|++++.......... .......+++......+.+..+|....
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~------ 307 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS------ 307 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC------
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc------
Confidence 7 799999999999999999999995 45 8999875432111000 001122333332211111112222110
Q ss_pred ccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccc------------------ccc----------CCe---
Q 007633 338 SMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA------------------ELI----------EGK--- 386 (595)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~------------------~~~----------~g~--- 386 (595)
.....+.. ....+|++.+..... ... +|.
T Consensus 308 -------------~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 308 -------------SLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp -------------CCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred -------------cCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 00000000 011234554422100 000 010
Q ss_pred ----------EEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC-Cccc
Q 007633 387 ----------WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND-TTVQ 455 (595)
Q Consensus 387 ----------~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~-~~~H 455 (595)
..|+|||++|... .| .+.++.|++++|.|.|.+ .+.|
T Consensus 368 ~~~g~~~~~~~~~~ING~~~~~~-~~-------------------------------~~~~~~G~~e~w~l~N~~~~~~H 415 (488)
T 3od3_A 368 MNHGGKFDFHHANKINGQAFDMN-KP-------------------------------MFAAAKGQYERWVISGVGDMMLH 415 (488)
T ss_dssp SCCCGGGCGGGCEEETTBCCCTT-CC-------------------------------SEECCBSSCEEEEEECTTCCCCE
T ss_pred ccccccccccceeeECCeeCCCC-CC-------------------------------ceEcCCCCEEEEEEEeCCCCCCc
Confidence 1389999988421 11 136789999999999987 5689
Q ss_pred eeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec----CcceeEEeeccccceeccceEEE
Q 007633 456 SYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD----NAGIWNLRAENLDTWYLGQEVYV 531 (595)
Q Consensus 456 P~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad----NPG~W~~HCHil~H~~~GM~~~~ 531 (595)
||||||++|+|++++..... ..++.|||||.|+ |+++.|+|++| |||.||||||+++|+|.|||..|
T Consensus 416 p~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f 486 (488)
T 3od3_A 416 PFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGF 486 (488)
T ss_dssp EEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEE
T ss_pred cEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEE
Confidence 99999999999998643222 1245799999999 99999999985 57899999999999999999999
Q ss_pred EE
Q 007633 532 NV 533 (595)
Q Consensus 532 ~V 533 (595)
+|
T Consensus 487 ~V 488 (488)
T 3od3_A 487 TV 488 (488)
T ss_dssp EC
T ss_pred EC
Confidence 86
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-58 Score=537.75 Aligned_cols=392 Identities=14% Similarity=0.137 Sum_probs=284.4
Q ss_pred hccccCCCeEEEEEEEEEEEe--cCC--------------------------CeeEEEE-------EEcCC--------C
Q 007633 23 NGCFGGDPYVFYDWTISYVTA--SPL--------------------------GDKQQVI-------GINGQ--------F 59 (595)
Q Consensus 23 ~~~~a~~~~~~~~l~~~~~~~--~~~--------------------------G~~~~~~-------~~Ng~--------~ 59 (595)
++..+.+.+|+|.+.|.+..+ +|. |..++++ .||+. +
T Consensus 13 ~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 92 (1065)
T 2j5w_A 13 CSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGF 92 (1065)
T ss_dssp -------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTT
T ss_pred hccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCC
Confidence 335556779999999999865 333 2334454 57877 9
Q ss_pred CCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCCCCCCC---CCCccCCCCeEEEEEEECCc--------
Q 007633 60 PGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQDGVLG---TNCPIPAGWNWTYQFQVKDQ-------- 124 (595)
Q Consensus 60 PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~~-------- 124 (595)
|||+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ |||+|+||++|+|+|+++++
T Consensus 93 PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~ 172 (1065)
T 2j5w_A 93 LGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDG 172 (1065)
T ss_dssp SCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSC
T ss_pred cCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCC
Confidence 99999999999999999999999999999999987 5588888884 79999999999999999754
Q ss_pred -eeeeEEccCcch--hhhcCceeeEEEeccCCCCCCCC-CCCCceeEeee------ccccccHHHHHHHH-hCCCC----
Q 007633 125 -IGSFFYFPSLDF--QRAAGGYGGIIINNRDVIPLPFA-VPDGDITIFIS------DWYTKSHKKLRKDV-ENGVD---- 189 (595)
Q Consensus 125 -~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~------d~~~~~~~~l~~~~-~~g~~---- 189 (595)
+||||||||.+. |+++||+|+|||++++....|.+ ..|+|++|+++ ||++... +.... +.+..
T Consensus 173 ~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~ 250 (1065)
T 2j5w_A 173 NCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDN 250 (1065)
T ss_dssp SEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTC
T ss_pred CceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccc
Confidence 599999999875 56899999999999876444432 45889999999 6666432 11111 11100
Q ss_pred C---CCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeee
Q 007633 190 L---GVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNY 265 (595)
Q Consensus 190 ~---~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~ 265 (595)
. ..++.++|||+.+ +..+.++|++|++|||||+|+|.. ..+.|||+||+|+ ++|..+
T Consensus 251 ~~~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~ 311 (1065)
T 2j5w_A 251 EDFQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRI 311 (1065)
T ss_dssp HHHHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEE
T ss_pred ccccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeee
Confidence 0 0235799999985 234789999999999999999986 6999999999999 356789
Q ss_pred eEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccc
Q 007633 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSI 345 (595)
Q Consensus 266 d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~ 345 (595)
|++.|+|||||||+|++++ +| +|+|+++...... ....+.++|.+...+.+.+.|..+. ...+ +.+++++
T Consensus 312 dtv~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~~--~~~~-~i~A~e~ 381 (1065)
T 2j5w_A 312 DTINLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGKH--VRHY-YIAAEEI 381 (1065)
T ss_dssp SEEEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTSE--EEEE-EEEEEEE
T ss_pred cEEEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCccccccccccc--eeEE-EEeceec
Confidence 9999999999999999996 77 9999998764322 3467888888765444444433311 1122 5678999
Q ss_pred ccccccCCC------CCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCC
Q 007633 346 RWNVSAGAA------RPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 346 ~~~l~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~ 419 (595)
+|++.+... ++++++++ .+++ |.... ..++++.+..++ ++|. +++|+...
T Consensus 382 ~wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~-~~ig~~y~k~v~-~~y~--------------d~~f~~~~ 437 (1065)
T 2j5w_A 382 IWNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGT-TRIGGSYKKLVY-REYT--------------DASFTNRK 437 (1065)
T ss_dssp EEESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBT-TBCCSEEEEEEE-EEES--------------STTCCSBC
T ss_pred ccccCCCCcccccccccCCCccc-------chhh-hccCC-cccCceEeeeee-eccc--------------CCceEEcC
Confidence 999987754 44555542 1122 22222 246666666666 5653 23455433
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEE
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGM 469 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~ 469 (595)
++.|..+....-.+++.++.|++++++|+|.....|+||+||+.|++++.
T Consensus 438 ~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~ 487 (1065)
T 2j5w_A 438 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNE 487 (1065)
T ss_dssp CCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGC
T ss_pred cCCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCC
Confidence 33232222233457899999999999999999999999999999998765
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-53 Score=436.76 Aligned_cols=270 Identities=22% Similarity=0.307 Sum_probs=226.6
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++++||+++ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999987 48889999999999999999999999999999999999999999999988889999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcchhh---hcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR---AAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++++|+|++ +++||||||||.+.+. .+||+|+|||++++..+.+. ..|+|++++++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 5999999999987553 48999999999876432211 458999999999998633211 1
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-eee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT-VQQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~-~p~ 263 (595)
..+.....++.++|||+.++. ...++|++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112223457899999999732 2569999999999999999975 799999999999999999998 689
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCC-CCCcceEEEEEecCC
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNS 318 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~ 318 (595)
.+|++.|.||||++|+++++ .+| .|.++++........ .......++|+|.+.
T Consensus 224 ~~dtv~l~pger~~v~~~a~-~pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMD-NPG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EESEEEECTTCEEEEEEECC-SCS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred cccEEEECCCCEEEEEEECC-CCe-eEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 99999999999999999999 578 999999875432210 011345689999864
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=498.47 Aligned_cols=241 Identities=13% Similarity=0.159 Sum_probs=183.9
Q ss_pred EEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCCCCCC---C
Q 007633 33 FYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQDGVL---G 104 (595)
Q Consensus 33 ~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~---~ 104 (595)
.-.+.+++...... |..+..|+ ++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+++||++ .
T Consensus 48 ~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 48 KKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREK 124 (742)
T ss_dssp ECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSS
T ss_pred EEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccc
Confidence 33555555555554 66666664 8999999999999999999999999999999999874 455566655 3
Q ss_pred CCCccCCCCeEEEEEEECC---------ceeeeEEccCcch--hhhcCceeeEEEeccCCCCCCCCCCCCceeEeeec--
Q 007633 105 TNCPIPAGWNWTYQFQVKD---------QIGSFFYFPSLDF--QRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISD-- 171 (595)
Q Consensus 105 tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d-- 171 (595)
|||+|+||++|+|+|++++ ++||||||||.+. |+++||+|+|||++++....+.....+|+++++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 7999999999999999953 4699999999875 89999999999999865432222224888888764
Q ss_pred ----cccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEe
Q 007633 172 ----WYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQ 246 (595)
Q Consensus 172 ----~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~ 246 (595)
|+++........+........++.++|||+.+ +..+.++|++|++|||||+|+|... .|.|||+
T Consensus 205 e~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlh 273 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLE 273 (742)
T ss_dssp CSSSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCT
T ss_pred CCccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEEC
Confidence 55542211000011111112356789999986 2347899999999999999999875 7999999
Q ss_pred CCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 247 NHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 247 gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
||.|+|++. .+|++.|.|||+++|++++++ +| .|.++++..
T Consensus 274 Gh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~ 314 (742)
T 2r7e_A 274 GHTFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHIS 314 (742)
T ss_dssp TCCCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSS
T ss_pred CCEEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCCh
Confidence 999999853 368889999999999999984 78 899988764
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-52 Score=432.45 Aligned_cols=271 Identities=24% Similarity=0.418 Sum_probs=226.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++|+||+++ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999999885 9999999999999999999999999999999999999999999999999899999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcch--hhh-cCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDF--QRA-AGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+ ...|+|++++++||+...... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc---cC
Confidence 99999999999999 58999999999865 788 999999999987543222 134789999999998742111 00
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee-ee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV-QQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~-p~ 263 (595)
..+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~-----------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFP-----------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTT-----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCC-----------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 11122235789999999863 23569999999999999999964 9999999999999999999996 88
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCC-CCCCCcceEEEEEecCCC
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNS-SEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~-~~~~~~~~~ail~y~~~~ 319 (595)
.+|++.|.||||++|++++++ +| .|.++++...... +........++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999985 68 8999998654311 001123457999998653
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=408.92 Aligned_cols=262 Identities=21% Similarity=0.245 Sum_probs=222.5
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 4567899999999999988 799999999999999999999999999999999997 58999999995 368877
Q ss_pred CCCCccCCCCeEEEEEEECCceeeeEEccCc---chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH--
Q 007633 104 GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL---DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK-- 178 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~-- 178 (595)
. +..|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++.. +.+|+|++++++||+++...
T Consensus 109 ~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 109 A-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp T-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred c-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCcccc
Confidence 5 2359999999999999 689999999996 68999999999999987532 24589999999999987421
Q ss_pred ------HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE
Q 007633 179 ------KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL 252 (595)
Q Consensus 179 ------~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v 252 (595)
.+.... ...++.++|||+.++++ ..+.+++++|++|||||+|+|....+.|||+||+|+|
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~v 248 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK 248 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEE
Confidence 011111 13468999999998542 1267999999999999999999889999999999999
Q ss_pred EeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 253 VETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 253 ia~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
|+.||.+++|..++++.|+||||+||+|++++ +| .|+|+++...... .....++++|.+..
T Consensus 249 i~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 249 VYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 99999999999999999999999999999995 68 9999998764321 13468999998654
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=423.64 Aligned_cols=401 Identities=17% Similarity=0.088 Sum_probs=264.8
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
+.+.+++++++++++....+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 444556666666654444444 456899999 999999999999999999998889999999732 157
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCC--C---CCCCCceeEeeeccccccH--HH
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLP--F---AVPDGDITIFISDWYTKSH--KK 179 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~--~---~~~d~e~~l~l~d~~~~~~--~~ 179 (595)
|+|+||++++|.|++. ++||||||||...|+.+||+|.|+|+++...... + .....+++..+ |+..... ..
T Consensus 90 ~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 9999999999999994 7999999999999999999999999987642210 0 00011111111 1111000 00
Q ss_pred HHH-HHhCCC-CCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCC-CceeeEEEeCCceeEEeec
Q 007633 180 LRK-DVENGV-DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGI-STSLNFRIQNHNLLLVETE 256 (595)
Q Consensus 180 l~~-~~~~g~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~-~~~~~~~i~gh~~~via~D 256 (595)
+.. ...... .....+.++|||+.. .|.+++++|++|||||+|.+. ...+.+++||. ++.|
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEeccCCceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 000 000000 112246789999863 288999999999999999986 34566777663 3679
Q ss_pred CcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcc
Q 007633 257 GSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTY 336 (595)
Q Consensus 257 G~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~ 336 (595)
|.+ +++.|.|||||++++++++ +| .||++++...... .......+.+.|.... ++|. ++.+
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~--~~~~Gl~g~l~v~~~~-----~~P~----~d~~ 291 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPT--HITNGMYGLLLVEPEG-----GLPQ----VDRE 291 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHH--HHHTTCEEEEEEECTT-----CSCC----CSEE
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHH--HHhCCCEEEEEEeCCC-----CCCC----CCee
Confidence 874 2346999999999999985 57 9999997531100 0012345667775432 1232 1111
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccc
Q 007633 337 FSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYK 416 (595)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~ 416 (595)
..+.. -.|..... .... +.... .+... .......|.+||+.+...
T Consensus 292 ~~~~~---~~~~~~~~---~~~~-----g~~~~----~~~~~---~~~~~~~~~iNG~~~~~~----------------- 336 (447)
T 2dv6_A 292 FYVMQ---GEIYTVKS---FGTS-----GEQEM----DYEKL---INEKPEYFLFNGSVGSLT----------------- 336 (447)
T ss_dssp EEEEE---EEECBSSC---TTCC-----EECCB----BHHHH---HTTCCSEEEETTSTTCCC-----------------
T ss_pred EEEEe---cccccCCc---cccc-----ccccC----ChHHh---hccCCCEEEECCcccCCC-----------------
Confidence 11100 01110000 0000 00000 00000 001124688999876310
Q ss_pred cCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC-cccEEE
Q 007633 417 LDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV-ARSTTQ 494 (595)
Q Consensus 417 ~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~ 494 (595)
...++.++.|++++|+|.|.+ ...||||||||+|+||+.+.+. +..|. +|||+.
T Consensus 337 --------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~----------~~~p~~~~dtv~ 392 (447)
T 2dv6_A 337 --------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV----------VSPPLIGVQTVS 392 (447)
T ss_dssp --------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS----------SSCCEEEESEEE
T ss_pred --------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc----------cCCCcccccEEE
Confidence 012457889999999999987 4679999999999999996432 12344 699999
Q ss_pred eCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 495 VFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 495 v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
|+|++++.|+|++||||.|+||||+++|++.||++.++|..++.
T Consensus 393 l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 393 VPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 99999999999999999999999999999999999999976543
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=389.32 Aligned_cols=235 Identities=19% Similarity=0.226 Sum_probs=206.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++.++++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++ ..++||+|+ +||
T Consensus 33 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~ 109 (288)
T 3gdc_A 33 TLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAG 109 (288)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTC
T ss_pred cEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccce
Confidence 46899999999988764 9999999999999999999999999999999999999999999997 368999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcc---hhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLD---FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.. ...|+|++|+++||+.++
T Consensus 110 ~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~-------- 176 (288)
T 3gdc_A 110 SIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG-------- 176 (288)
T ss_dssp SBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS--------
T ss_pred eECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC--------
Confidence 99999999999999 6999999999986 7999999999999997653 234799999999999861
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEeCCceeEEeecCcceeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQNHNLLLVETEGSYTVQQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~~~p~ 263 (595)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|+|... .|.|||+||.|+|++.++....|.
T Consensus 177 --g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~ 241 (288)
T 3gdc_A 177 --G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSE 241 (288)
T ss_dssp --T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSE
T ss_pred --C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCc
Confidence 1 246899999998721 125799999999999999999654 799999999999998544433578
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
..|++.|.||||++|+++++ .+| .|.++++..
T Consensus 242 ~~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 242 YTDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp EESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred eeeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 89999999999999999998 678 999999764
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=460.52 Aligned_cols=416 Identities=14% Similarity=0.113 Sum_probs=268.6
Q ss_pred eeEEEEEEcCCCCC--CeEEeecCCEEEEEEEECCCCCceeeeCCccCCC-CCCCCCCCC-CCCccCCCCeEEEEEEECC
Q 007633 48 DKQQVIGINGQFPG--PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRK-NSWQDGVLG-TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 48 ~~~~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~ 123 (595)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||++|.+ +.++||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56799999999999 889999999999999976 4569999999998 999999997 7 999999999999999 5
Q ss_pred ceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEee----eccccccHHHHHHHH-h-CCCCCCCCCeEE
Q 007633 124 QIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFI----SDWYTKSHKKLRKDV-E-NGVDLGVPDGIL 197 (595)
Q Consensus 124 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~l~~~~-~-~g~~~~~~d~~l 197 (595)
++||||||||.+.|+.+||+|.++|++......+...++.|.+++| +||++.....+...+ . .+. .|...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554444346678899999 899998655432211 1 122 166677
Q ss_pred EcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE----------EeecCcceeeeeeeE
Q 007633 198 INGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL----------VETEGSYTVQQNYTN 267 (595)
Q Consensus 198 iNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v----------ia~DG~~~~p~~~d~ 267 (595)
+|+... - + |++|++ ..-+.+.+|+|++ +++|| .+
T Consensus 768 ~n~~~~--------------~-i----G~tY~k---------~~y~~~~d~tft~~~~r~~~~~~v~~pG--------P~ 811 (1065)
T 2j5w_A 768 LDKGEF--------------Y-I----GSKYKK---------VVYRQYTDSTFRVPVERKAEEEHLGILG--------PQ 811 (1065)
T ss_dssp TCCTTT--------------C-C----CSEEEE---------EEEEEESSTTCCSBCCCCGGGGGGTTSC--------CC
T ss_pred ecCCCc--------------c-c----cceEee---------eEEEEEcCCcceecccCCccccccCCCC--------CE
Confidence 787653 1 2 899988 3446889999998 56666 47
Q ss_pred EEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc----cccc
Q 007633 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM----NQAR 343 (595)
Q Consensus 268 l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~----~~~~ 343 (595)
|.+.+|||+.|.++-+ .+. .|.|+.+...................|........+|.++.+. +..+-+ ...+
T Consensus 812 I~v~~Gd~v~v~l~N~-~~~-~~sih~HGl~~~~~~~~~i~PG~~~ty~~~~~~~~gp~~~~~~--~gt~wYhsh~~~~~ 887 (1065)
T 2j5w_A 812 LHADVGDKVKIIFKNM-ATR-PYSIHAHGVQTESSTVTPTLPGETLTYVWKIPERSGAGTEDSA--CIPWAYYSTVDQVK 887 (1065)
T ss_dssp EEEETTEEEEEEEEEC-SSS-CBCCEESSCBCSCSCCCCBCTTCEEEEEEECCGGGSCCTTSCS--EEEEEEECCTTHHH
T ss_pred EEEecCCEEEEEEEeC-CCC-CceEeeccccccCCCCceeCCCCeEEEEEEecCccCCccccCC--ceEEEEecCCChHH
Confidence 9999999999999754 444 8999887632111100011111122333221111122222221 111100 0000
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEe--cCeecCC-C-CCcHhhhhhcCCCCccccCC
Q 007633 344 SIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTL--NGISYLP-P-STPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~i--Ng~sf~~-~-~~P~~~~~~~~~~~~~~~~~ 419 (595)
.+..-+... ....+.+.........+.++.+.... .+....|++ |+.+|.. | ..+++...+.. ...
T Consensus 888 q~~~GL~G~-liV~~~~~l~~~~~~~d~D~~l~~~~---~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~-~~~----- 957 (1065)
T 2j5w_A 888 DLYSGLIGP-LIVCRRPYLKVFNPRRKLEFALLFLV---FDENESWYLDDNIKTYSDHPEKVNKDDEEFIE-SNK----- 957 (1065)
T ss_dssp HHHTTCEEE-EEEECCC-----CCCCEEEEEEEEEE---EEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHH-HTE-----
T ss_pred hhhccccce-eEecCcccccccCCCcceEEEEEEEe---ecCCcceeeccCcccccCCccccCcchhhhhc-cCc-----
Confidence 100000000 00000000000001123334332210 111112332 3334431 1 11211100000 000
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP 497 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p 497 (595)
....|+..+.....+.++.|++|+|+|.|.+ ...||||||||.|+|++++ |.+|||+.|+|
T Consensus 958 -~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~p 1020 (1065)
T 2j5w_A 958 -MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFP 1020 (1065)
T ss_dssp -EEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECT
T ss_pred -eEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECC
Confidence 0112333333455678999999999999985 4689999999999998653 67899999999
Q ss_pred CcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 498 ~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+++++|+|++||||.|+||||+++|++.|||..++|.+.+.
T Consensus 1021 g~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp TCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred CCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 99999999999999999999999999999999999987653
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=399.00 Aligned_cols=263 Identities=18% Similarity=0.206 Sum_probs=221.8
Q ss_pred ccCCCeEEEEEEEEEEEec-CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCC
Q 007633 26 FGGDPYVFYDWTISYVTAS-PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 26 ~a~~~~~~~~l~~~~~~~~-~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 102 (595)
.+.+.+++|+|++++.+++ +||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+++ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 4566789999999999998 4899999999999999999999999999999999986 499999999964 6887
Q ss_pred CCCCCccCCCCeEEEEEEECCceeeeEEccC---cchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH-
Q 007633 103 LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPS---LDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK- 178 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~- 178 (595)
+.+ .+|+||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. +.+|+|++++++||++....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999999 68999999997 468999999999999987542 24589999999999987431
Q ss_pred -------HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCcee
Q 007633 179 -------KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLL 251 (595)
Q Consensus 179 -------~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~ 251 (595)
.+.. . ....++.++|||+.+.. ...+.+++++|++|||||+|+|....+.|||+||.|+
T Consensus 172 ~~~~~~~~~~~-~----~~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~ 237 (442)
T 2zoo_A 172 EAGLQPFDMAK-A----IDEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFD 237 (442)
T ss_dssp CCEEECBCHHH-H----HTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred ccccccCChhH-h----ccCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEE
Confidence 0110 0 12467999999998621 0126899999999999999999988999999999999
Q ss_pred EEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 252 LVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 252 via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
||+.||.+++|..++++.|.||||+||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 238 vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 238 TVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred EEecCCccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 999999999999999999999999999999995 67 9999997654311 14568999998654
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=369.68 Aligned_cols=240 Identities=17% Similarity=0.206 Sum_probs=201.4
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
+.+.+|+|+|+|++.. .+.....++.+||++|||+||+++||+|+|+|+|+|+++++|||||+++. .++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCcCCc
Confidence 4567899999999853 34444567889999999999999999999999999999999999999886 4799999899
Q ss_pred CccCCCCeEEEEEEECC------------ceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCceeEe
Q 007633 107 CPIPAGWNWTYQFQVKD------------QIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIF 168 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 168 (595)
|+|+||++|+|+|++++ ++||||||||.. .|+++||+|+|||++++.. .+|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999963 379999999973 6999999999999998752 238999999
Q ss_pred eeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 169 ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 169 l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
++|| +|||+.+. ..+.++++.|+++||||+|.+.. .+.||+|||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8765 89999862 35889999999999999999984 899999999
Q ss_pred ceeEEeecCccee----eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 249 NLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 249 ~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
.|++++ ||.... +..+|++.|.|||++++++++++ ++| .|+++++...... ....+.+.+...
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~H~~-----~GM~g~~~V~~~ 266 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 266 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCchHhh-----CCCeEEEEEeCC
Confidence 999875 665432 45789999999999999999985 688 9999998653221 334566666543
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=373.48 Aligned_cols=269 Identities=19% Similarity=0.152 Sum_probs=209.9
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
+.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 345567899999999999987 5999999999999999999999999999999999 578999999987654555555
Q ss_pred C-CCCccCCCCeEEEEEEECCceeeeEEccCcc-----hhhhcCceeeEEEeccCCCC----CCCCCCCCceeEeeeccc
Q 007633 104 G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD-----FQRAAGGYGGIIINNRDVIP----LPFAVPDGDITIFISDWY 173 (595)
Q Consensus 104 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 173 (595)
. + .|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++++++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 5899999999986 69999999999999875432 122 45899999999999
Q ss_pred ccc--HHHH----------HHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCcee
Q 007633 174 TKS--HKKL----------RKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSL 241 (595)
Q Consensus 174 ~~~--~~~l----------~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~ 241 (595)
+.. ...+ ...++.. ....++.++|||+...+ ...+.++|++||+||||+.|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHHh-hccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 831 1110 0000100 12457999999998521 013679999999988776665443222
Q ss_pred eEEEeCCceeEEeecCcceee-e-eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccC-CCCCCCcceEEEEEecCC
Q 007633 242 NFRIQNHNLLLVETEGSYTVQ-Q-NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN-SSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 242 ~~~i~gh~~~via~DG~~~~p-~-~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~-~~~~~~~~~~ail~y~~~ 318 (595)
..+++|.++|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|+++++..... . ....++++|.+.
T Consensus 249 -h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~~-----~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 249 -HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAVH-----KGATAHVLVEGE 319 (333)
T ss_dssp -EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TCCEEEEEEESC
T ss_pred -EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHhh-----CCCEEEEEEcCC
Confidence 237899999999 9999974 3 489999999999999999995 68 999999875432 2 456789999864
Q ss_pred C
Q 007633 319 L 319 (595)
Q Consensus 319 ~ 319 (595)
.
T Consensus 320 ~ 320 (333)
T 1mzy_A 320 W 320 (333)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=377.59 Aligned_cols=268 Identities=21% Similarity=0.190 Sum_probs=207.4
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG 104 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 104 (595)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 355689999999998865 6699999999999999999999999999999999974 45666666665566777665
Q ss_pred -CCCccCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCC---CCCCCceeEeeecccccc
Q 007633 105 -TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPF---AVPDGDITIFISDWYTKS 176 (595)
Q Consensus 105 -tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~---~~~d~e~~l~l~d~~~~~ 176 (595)
++ |+||++++|+|++ +++||||||||. +.|+.+||+|+|||++++..+.+. ..+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 54 9999999999999 589999999996 379999999999999876432111 145889999999999842
Q ss_pred HH--HH----------HHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEE
Q 007633 177 HK--KL----------RKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFR 244 (595)
Q Consensus 177 ~~--~l----------~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~ 244 (595)
+. .+ ...++. .....++.++|||+..++| ..+.++|++|++||| +|++..+.+.|+
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~~~ 249 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTRPH 249 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBCEE
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccceE
Confidence 11 11 000000 0124678999999997543 137899999997765 677766666655
Q ss_pred -EeCCceeEEeecCcceeee--eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 245 -IQNHNLLLVETEGSYTVQQ--NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 245 -i~gh~~~via~DG~~~~p~--~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
|+||.++|++ ||.+++|. .++++.|.+||||||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 250 ~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 250 LIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp ETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 5999999998 99999764 468999999999999999996 78 9999998753210 13567899998654
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=371.83 Aligned_cols=243 Identities=17% Similarity=0.190 Sum_probs=201.3
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 24 GCFGGDPYVFYDWTISYVTASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 24 ~~~a~~~~~~~~l~~~~~~~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
.+.+.+.++.++|.+. .-++|.. ..++..||++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+||+
T Consensus 6 ~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCS
T ss_pred cCCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCC
Confidence 3455667899999875 3456644 455678999999999999999999999999999999999999875 679999
Q ss_pred CCCCCccCCCCeEEEEEEEC------------CceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCc
Q 007633 103 LGTNCPIPAGWNWTYQFQVK------------DQIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGD 164 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e 164 (595)
+.+||+|+||++|+|+|++. +++||||||||.. .|+++||+|+|||+++.. ..+|+|
T Consensus 81 ~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-----~~~d~e 155 (313)
T 3tas_A 81 KQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-----VLPDRT 155 (313)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----BCCSEE
T ss_pred ccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc-----cccccc
Confidence 99999999999999999863 3689999999964 458899999999999865 245899
Q ss_pred eeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEE
Q 007633 165 ITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFR 244 (595)
Q Consensus 165 ~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~ 244 (595)
++|+++|| ++||+... ..+.++++.|++|||||+|+|. ..+.||
T Consensus 156 ~~l~~~d~------------------------t~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~-~~hpfH 199 (313)
T 3tas_A 156 HTIVFNDM------------------------TINNRPAH-----------TGPDFEATVGDRVEFVMITHGE-YYHTFH 199 (313)
T ss_dssp EEEEEETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESS-CCEEEE
T ss_pred ceeeccch------------------------hcccCCcc-----------cccccccccCCEEEEEEecccc-cceeee
Confidence 99999998 46777652 3478999999999999999996 489999
Q ss_pred EeCCceeEEeecCccee---eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 245 IQNHNLLLVETEGSYTV---QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 245 i~gh~~~via~DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
|+||.|++++.||.... |..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+...
T Consensus 200 lHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 272 (313)
T 3tas_A 200 LHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 272 (313)
T ss_dssp ETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEECC
Confidence 99999999999987663 67899999999999999998764 478 8999998753322 335567777643
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=368.13 Aligned_cols=242 Identities=16% Similarity=0.175 Sum_probs=197.9
Q ss_pred cccCCCeEEEEEEEEEEEecCCC-eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~~G-~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
.++.+.++.|+|.+++.. +| ....++.+||++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 23 ~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 23 VRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred cccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 356778999999998765 33 22344556999999999999999999999999999999999999774 6799998
Q ss_pred CCCCccCCCCeEEEEEEEC------------CceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCce
Q 007633 104 GTNCPIPAGWNWTYQFQVK------------DQIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGDI 165 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~ 165 (595)
.+||+|+||++|+|+|+++ .++||||||||.. .|+++||+|+|||+++.. ..+|+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~-----~~~d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD-----LLPKRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----CCCSEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc-----cCccccc
Confidence 8999999999999999985 2689999999963 478999999999998764 2458999
Q ss_pred eEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE
Q 007633 166 TIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI 245 (595)
Q Consensus 166 ~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i 245 (595)
++++++|+ +||+... +.+.++++.||++||||+|++.. .+.|||
T Consensus 173 ~l~~~~~~------------------------~Ng~~~~-----------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHl 216 (299)
T 3t9w_A 173 TVVFNDMM------------------------INNRAHH-----------DAPTFEANLGERVEWIAIGHGSN-FHTFHL 216 (299)
T ss_dssp EEEEETTE------------------------ETTCCTT-----------CCCEEEEETTCEEEEEEEEESSC-CCEEEE
T ss_pred eeeeeeee------------------------ecCcccc-----------ccccceecCCCEEEEEEEecccc-ceeeeE
Confidence 99998773 7888763 35889999999999999999975 789999
Q ss_pred eCCceeEEeecCccee---eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 246 QNHNLLLVETEGSYTV---QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 246 ~gh~~~via~DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
+||.|+++..|+.... +..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+...
T Consensus 217 HGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 217 HGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp TTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 9999999998887664 34689999999999999997653 478 8999998754322 234566666543
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=372.43 Aligned_cols=268 Identities=17% Similarity=0.174 Sum_probs=205.9
Q ss_pred cccCCCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
..+.+.+++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 32 AKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp CSSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGG
T ss_pred ccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCC
Confidence 35566789999999999877 559999999999999999999999999999999998 6799999988654444444
Q ss_pred CC-CCCccCCCCeEEEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCC----CCCCCCCCceeEeeeccc
Q 007633 103 LG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIP----LPFAVPDGDITIFISDWY 173 (595)
Q Consensus 103 ~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 173 (595)
.. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++++++||+
T Consensus 109 ~~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 184 (340)
T 2bw4_A 109 GALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFY 184 (340)
T ss_dssp GGGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEEC
T ss_pred ccce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeee
Confidence 43 5 49999999999999 5899999999975 79999999999999875321 122 45899999999999
Q ss_pred cc--cHHH----------HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCcee
Q 007633 174 TK--SHKK----------LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSL 241 (595)
Q Consensus 174 ~~--~~~~----------l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~ 241 (595)
+. .... .....+. .....++.++|||+.+.+ ...+.++|++|++|||++.|+ .+.+
T Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~--~~~~ 252 (340)
T 2bw4_A 185 VPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQA--NRDT 252 (340)
T ss_dssp CCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEES--SSCB
T ss_pred eccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCC--CCcc
Confidence 83 1111 1000110 012457899999999621 114889999999887665554 4444
Q ss_pred eE-EEeCCceeEEeecCcceee-e-eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc-cCCCCCCCcceEEEEEecC
Q 007633 242 NF-RIQNHNLLLVETEGSYTVQ-Q-NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF-VNSSEWNKVTGVAILHYSN 317 (595)
Q Consensus 242 ~~-~i~gh~~~via~DG~~~~p-~-~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~-~~~~~~~~~~~~ail~y~~ 317 (595)
.| ++++|.|+|++ ||.++.+ . .++++.|.||||+||+|++++ +| +|+++++... ... ....++++|.+
T Consensus 253 ~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~~-----~Gm~~~~~V~~ 324 (340)
T 2bw4_A 253 RPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAFE-----LGAAGHFKVTG 324 (340)
T ss_dssp CEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TSCEEEEEEES
T ss_pred ceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHHh-----CCCEEEEEECC
Confidence 43 48899999997 9998864 3 589999999999999999996 68 9999998753 211 34568899986
Q ss_pred CC
Q 007633 318 SL 319 (595)
Q Consensus 318 ~~ 319 (595)
..
T Consensus 325 ~~ 326 (340)
T 2bw4_A 325 EW 326 (340)
T ss_dssp CC
T ss_pred CC
Confidence 44
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=346.14 Aligned_cols=238 Identities=17% Similarity=0.223 Sum_probs=196.0
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEE-EEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVTASPLGDKQQ-VIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~~~~-~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
.+.+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 45679999999975 3554221 1234899999999999999999999999999999999999876 6899999889
Q ss_pred CccCCCCeEEEEEEECC------------ceeeeEEccCc------chhhhcCceeeEEEeccCCCCCCCCCCCCceeEe
Q 007633 107 CPIPAGWNWTYQFQVKD------------QIGSFFYFPSL------DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIF 168 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 168 (595)
|+|+||++++|+|++.. ++|+||||||. ..|+.+||+|+|||++++.. .+|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 47999999999999987652 248999999
Q ss_pred eeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 169 ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 169 l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
++|| +|||+.++ ..+.+++++||+|||||+|.+. ..|.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCc-cccccEecCc
Confidence 9876 79999852 2478999999999999999997 5999999999
Q ss_pred ceeEEeecCccee----eeeeeEEEEeccceEEEEEEeC--CCCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 249 NLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTD--QNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 249 ~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~--~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
.|+|++ ||.+.. +...|++.|.|||+++++++++ +.+| .|+++++...... ....+.+.+...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999974 675543 3567999999999999999984 3678 9999998653221 345677777643
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=374.69 Aligned_cols=263 Identities=13% Similarity=0.142 Sum_probs=191.5
Q ss_pred CCCeEEEEEEEEEEEe--cCCC------------eeEEE--EEE----------------cCCCCCCeEEeecCCEEEEE
Q 007633 28 GDPYVFYDWTISYVTA--SPLG------------DKQQV--IGI----------------NGQFPGPILNVTTNWNVVVN 75 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~G------------~~~~~--~~~----------------Ng~~PgP~I~v~~Gd~v~v~ 75 (595)
.+.+|+|-+-|.+..+ +|.| ..+++ ..| |+++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3567889888888765 4322 22333 223 44799999999999999999
Q ss_pred EEECCCCCceeeeCCccCCCCCCCCCCCC-C--------CCccCCCCeEEEEEEECCc-----ee----eeEEccCcc--
Q 007633 76 VKNDLDEPLLLTWNGVQHRKNSWQDGVLG-T--------NCPIPAGWNWTYQFQVKDQ-----IG----SFFYFPSLD-- 135 (595)
Q Consensus 76 v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 135 (595)
|+|.|+++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++ +| |||||||..
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 68999996 6 8999999999999999754 57 999999984
Q ss_pred hhhhcCceeeEEEeccCCCCC--CCCCCCCceeEeee------ccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCC
Q 007633 136 FQRAAGGYGGIIINNRDVIPL--PFAVPDGDITIFIS------DWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~------d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~ 207 (595)
.|+.+||+|+|||++++.... ..+..++|++|+++ ||+++.................++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~---- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY---- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS----
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec----
Confidence 799999999999999865321 11234689999999 788764322110000111123468999999985
Q ss_pred CCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCC
Q 007633 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNA 286 (595)
Q Consensus 208 ~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~ 286 (595)
+.+.++|++|++|||||+|++... .|.||+|||.|+|++.|| ..+|++.|.||||+||+|++++ +
T Consensus 237 --------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-p 302 (647)
T 1sdd_B 237 --------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-P 302 (647)
T ss_dssp --------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-S
T ss_pred --------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-c
Confidence 137899999999999999999864 899999999999999986 3679999999999999999995 6
Q ss_pred CcceEEEEeecccCCCCCCCcceEEEEEec
Q 007633 287 SSDYYIVASPRFVNSSEWNKVTGVAILHYS 316 (595)
Q Consensus 287 g~~y~i~a~~~~~~~~~~~~~~~~ail~y~ 316 (595)
| .|.++++...... ....+++.+.
T Consensus 303 G-~w~~hch~~~h~~-----~Gm~~~~~V~ 326 (647)
T 1sdd_B 303 G-WWLLDTEVGEIQR-----AGMQTPFLIV 326 (647)
T ss_dssp E-EEEEECCCHHHHT-----TTCEEEEEEE
T ss_pred e-EeecccCcccccc-----cccccceeee
Confidence 7 8999988753322 2334555554
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=347.12 Aligned_cols=258 Identities=18% Similarity=0.175 Sum_probs=212.6
Q ss_pred CCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCCCC-
Q 007633 29 DPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGVLG- 104 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~- 104 (595)
+.++.|+|++.+....+ +|....+|+|||++|||+|++++||+++|++.|.++ ..++|||||+. .+||++.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 35678889888777766 588899999999999999999999999999999986 57999999985 3799875
Q ss_pred CCCccCCCCeEEEEEEECCceeeeEEccCcc---hhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH---
Q 007633 105 TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD---FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK--- 178 (595)
Q Consensus 105 tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~--- 178 (595)
+ .|.||++++|.|++ +++|+||||||.. .|+.+||+|+|+|+++... +..|+|++++++||++....
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCccccc
Confidence 4 39999999999999 5899999999964 7899999999999986532 24588999999999875210
Q ss_pred -----HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE
Q 007633 179 -----KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253 (595)
Q Consensus 179 -----~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi 253 (595)
.+.... + ..++.++|||+.+.++ ..+.+++++|++|||||+|++....|.|||+||.|+||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv 374 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHV 374 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEE
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEE
Confidence 011111 1 2468999999997432 12579999999999999999988899999999999999
Q ss_pred eecCcceeee--eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 254 ETEGSYTVQQ--NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 254 a~DG~~~~p~--~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
+.||.+++|. .+|++.|.||||++|+|++++ +| .|+|+++...... ....++++|.+..
T Consensus 375 ~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 375 YSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp CGGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred EcCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 9999998754 589999999999999999995 78 9999998765422 3457899997653
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=349.40 Aligned_cols=214 Identities=13% Similarity=0.163 Sum_probs=160.0
Q ss_pred EEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccC----CCCCCCCCCCC---CCCccCCCCeEEEEEEECC
Q 007633 51 QVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH----RKNSWQDGVLG---TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 51 ~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~----~~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~ 123 (595)
..+++| ++|||+|+|++||+|+|+|+|.++++++|||||++. .+.+++||+++ .||+|+||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345678 689999999999999999999999999999999984 34444444442 2799999999999999964
Q ss_pred c---------eeeeEEccCcch--hhhcCceeeEEEeccCCC---CCCCCCCCCceeEeeeccccccHHHHHHHHhCCCC
Q 007633 124 Q---------IGSFFYFPSLDF--QRAAGGYGGIIINNRDVI---PLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD 189 (595)
Q Consensus 124 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~ 189 (595)
+ +||||||||.+. |+.+||+|+|||+++... +.+. ..|+|++++++||..... ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~~-- 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------WN-- 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------SS--
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------cc--
Confidence 4 379999999775 889999999999987532 1121 458899999999853211 00
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEE
Q 007633 190 LGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268 (595)
Q Consensus 190 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l 268 (595)
...++.++|||+.+. ..|.+++++|++|||||+|+|.. ..+.||+|||.|.+ ||. .+|++
T Consensus 198 ~~~~~~~~ING~~~~-----------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv 258 (306)
T 1sdd_A 198 QTSSLMYTVNGYVNG-----------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAI 258 (306)
T ss_dssp CCCCEEECSSSCCSS-----------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCC
T ss_pred cCCCcceeeCCEecC-----------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceE
Confidence 123678999999862 24789999999999999999986 57789999999985 873 48999
Q ss_pred EEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 269 DIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 269 ~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
.|.||||++|+++++ .+| .|+++++..
T Consensus 259 ~l~pger~~v~~~~~-~pG-~~~~hch~~ 285 (306)
T 1sdd_A 259 TLVSATSTTANMTVS-PEG-RWTIASLIP 285 (306)
T ss_dssp CEETTCCBC---------C-CCCCBCCST
T ss_pred EECCCcEEEEEEEcC-CCe-EEEEEeCCh
Confidence 999999999999998 478 899988764
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=379.91 Aligned_cols=249 Identities=12% Similarity=0.140 Sum_probs=197.2
Q ss_pred CCCeEEEEEEEEEEEe--cCCCe---------------eEEE--EEE-cC---------------CCCCCeEEeecCCEE
Q 007633 28 GDPYVFYDWTISYVTA--SPLGD---------------KQQV--IGI-NG---------------QFPGPILNVTTNWNV 72 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~G~---------------~~~~--~~~-Ng---------------~~PgP~I~v~~Gd~v 72 (595)
.+.+|+|.+.|++... +|+|. .+++ +.| |+ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4568999999999874 67653 2333 223 33 579999999999999
Q ss_pred EEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECC---------ceeeeEEccCcch--hhhcC
Q 007633 73 VVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKD---------QIGSFFYFPSLDF--QRAAG 141 (595)
Q Consensus 73 ~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 141 (595)
+|+|+|.|+++++|||||+++..+.. ||++++||+|+||++|+|+|++++ ++||||||||.+. |+++|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999987654 799999999999999999999975 8999999999875 89999
Q ss_pred ceeeEEEeccCCCCC--CCCCCCCceeEeeec------cccccHHHHHHHHhCCC-----C---CCCCCeEEEcCCCCCC
Q 007633 142 GYGGIIINNRDVIPL--PFAVPDGDITIFISD------WYTKSHKKLRKDVENGV-----D---LGVPDGILINGLGPYR 205 (595)
Q Consensus 142 l~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~l~~~~~~g~-----~---~~~~d~~liNG~~~~~ 205 (595)
|+|+|||++++.... .....++|++|++++ ||++... ........ + ....+.++|||+.+
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999865321 112457899888753 5554221 11110000 0 01235689999986
Q ss_pred CCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC
Q 007633 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ 284 (595)
Q Consensus 206 ~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~ 284 (595)
+..+.++|++|++|||||+|+|.. ..|.||||||.|+|++.||. .+|++.|.||||++|++++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 234789999999999999999975 47999999999999999974 689999999999999999984
Q ss_pred CCCcceEEEEeec
Q 007633 285 NASSDYYIVASPR 297 (595)
Q Consensus 285 ~~g~~y~i~a~~~ 297 (595)
+| .|.++++..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 67 899988764
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-37 Score=346.24 Aligned_cols=216 Identities=15% Similarity=0.175 Sum_probs=169.7
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCC-----CCC-CCCccCCCCeEEEEEEECCcee-----
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDG-----VLG-TNCPIPAGWNWTYQFQVKDQIG----- 126 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~~Y~f~~~~~~G----- 126 (595)
.+|||+||+++||+|+|+|+|.++++++|||||+++. ++|+|| ++. +||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 577765 455 7999999999999999976554
Q ss_pred ----eeEEccCcc--hhhhcCceeeEEEeccCCCC-CC-CCCCCCceeEeeec------cccccHHHHHHHHhCCCCC--
Q 007633 127 ----SFFYFPSLD--FQRAAGGYGGIIINNRDVIP-LP-FAVPDGDITIFISD------WYTKSHKKLRKDVENGVDL-- 190 (595)
Q Consensus 127 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~l~d------~~~~~~~~l~~~~~~g~~~-- 190 (595)
|||||||.. .|+++||+|+|||+++.... .. ....|+|++|++++ ||+.. .+..+.......
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999976 47899999999999875321 11 12558999999965 55431 222221100000
Q ss_pred C------CCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeee
Q 007633 191 G------VPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQ 263 (595)
Q Consensus 191 ~------~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~ 263 (595)
. ....++|||+.+. ..+ +++++|++|||||+|+|.. ..|.|||+||.|+|+ +.
T Consensus 605 ~~~~~~~~~~~~~ING~~~~-----------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~ 664 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFD-----------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MV 664 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSS-----------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SS
T ss_pred ccccccccCceeeecCcCCC-----------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cc
Confidence 0 0124789999861 223 8999999999999998875 468999999999987 46
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.+|++.|.||||++|+++++ .+| .|.++++...
T Consensus 665 ~~Dtv~l~Pg~~~~v~~~ad-~pG-~w~~hcH~~~ 697 (742)
T 2r7e_A 665 YEDTLTLFPFSGETVFMSME-NPG-LWILGCHNSD 697 (742)
T ss_dssp SBCSSCCCCCSSEECCEECC-CCC-CSCCEECCCS
T ss_pred ceeEEEECCCcEEEEEEEcC-CCe-EEEEEeCCch
Confidence 78999999999999999998 568 9999998754
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=244.79 Aligned_cols=231 Identities=15% Similarity=0.117 Sum_probs=163.2
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
...+++||+.. .|.|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999874 3899999999999999999875 7889999975 457899764 24457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||++++.++++ .+| .||.+++....... ......+.|.+..... .+. . +
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~--~~~Gl~G~liV~~~~~-----~~~--~--d------------------ 162 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPH--IAKGLYGGFIVEPKEG-----RPP--A--D------------------ 162 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHH--HHTTCEEEEEEECSSC-----CCC--C--S------------------
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHH--HhCcCeEEEEEeCCcc-----CCC--C--c------------------
Confidence 99999999996 678 99999987421000 0012233333332110 010 0 1
Q ss_pred CCCCCCCCCCCcCccceeEEEEEeccc-cc-ccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCcc
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRP-AE-LIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKV 430 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~-~~-~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 430 (595)
+++.+.... .. .......|+|||+.|.. .
T Consensus 163 ------------------~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~-----~-------------------------- 193 (288)
T 3gdc_A 163 ------------------DEMVMVMNGYNTDGGDDNEFYSVNGLPFHF-----M-------------------------- 193 (288)
T ss_dssp ------------------EEEEEEEEEECCSSTTCCSEEEETTSTTHH-----H--------------------------
T ss_pred ------------------ceEEEEEeeEecCCCCCcceEEECcccccc-----c--------------------------
Confidence 111111100 00 00012368899987621 0
Q ss_pred ceeEEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec
Q 007633 431 DTSLINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD 508 (595)
Q Consensus 431 ~~~v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad 508 (595)
...+.++.|+.|+|.+.|.+. ..|||||||+.|+|++.+. .+..+.++||+.|+||++..|+|+++
T Consensus 194 -~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~-----------~~~~~~~~Dtv~v~pg~~~~v~~~~~ 261 (288)
T 3gdc_A 194 -DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGT-----------MLTPSEYTDTISQVQGQRGILELRFP 261 (288)
T ss_dssp -HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTC-----------CSSCSEEESEEEEETTCEEEEEECCC
T ss_pred -CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCC-----------ccCCCceeeEEEeCCCceEEEEEECC
Confidence 012467899999999999875 3599999999999986432 12345789999999999999999999
Q ss_pred CcceeEEeeccccceeccceEEEEEec
Q 007633 509 NAGIWNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 509 NPG~W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
+||.|+||||+++|++.|||..++|.+
T Consensus 262 ~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 262 YPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 999999999999999999999999863
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-27 Score=244.06 Aligned_cols=215 Identities=15% Similarity=0.144 Sum_probs=153.5
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCC-----------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQN----------- 285 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~----------- 285 (595)
.|+|++++|+++|+||+|.... .+.+|.||..+. .+.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4999999999999999999975 566888888777 68899874 34568999999999998754
Q ss_pred -CCcceEEEEeecccCC---CCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCC
Q 007633 286 -ASSDYYIVASPRFVNS---SEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGS 361 (595)
Q Consensus 286 -~g~~y~i~a~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~ 361 (595)
+| .||.+.+...... .....+.+.-|++.....
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~------------------------------------------ 185 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------------------------------------------ 185 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------------------------------------------
T ss_pred Cce-EEEEecCccccccchhhhhcCCeEEEEEecCCCC------------------------------------------
Confidence 23 5656654321100 000112222233221100
Q ss_pred CCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCc
Q 007633 362 FKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKG 441 (595)
Q Consensus 362 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~ 441 (595)
..++++.+... .|+|||+.|.. ...+.++.|+
T Consensus 186 ------~pd~e~~l~~~---------d~~iNG~~~~~---------------------------------~~~l~v~~Ge 217 (343)
T 3cg8_A 186 ------LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATVGD 217 (343)
T ss_dssp ------CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTC
T ss_pred ------CCCceEEEEcc---------cceecccCCCC---------------------------------CccEEeCCCC
Confidence 01133433321 27889876511 1235789999
Q ss_pred EEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe---cCcceeEEeec
Q 007633 442 FMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL---DNAGIWNLRAE 518 (595)
Q Consensus 442 ~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a---dNPG~W~~HCH 518 (595)
+|+|+|.|.+...||||||||.|+|+. .|.+.. ....+.++||+.|+|+++..++|++ ||||.|+||||
T Consensus 218 ~vri~l~N~g~~~HpfHlHGh~f~v~~--~G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCH 289 (343)
T 3cg8_A 218 RVEIVMITHGEYYHTFHMHGHRWADNR--TGILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCH 289 (343)
T ss_dssp EEEEEEEEESSCCEEEEETTCCEESSS--SSSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEEC
T ss_pred EEEEEEEcCCccccccEecCcEEEEec--cCcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCC
Confidence 999999999889999999999999864 343321 1123568999999999999999995 89999999999
Q ss_pred cccceeccceEEEEEecCC
Q 007633 519 NLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 519 il~H~~~GM~~~~~V~~~~ 537 (595)
+++|++.|||..++|.+++
T Consensus 290 i~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 290 VQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp SHHHHHTTCEEEEEEECTT
T ss_pred CHHHHhccCcEEEEEecCC
Confidence 9999999999999998764
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=240.93 Aligned_cols=247 Identities=17% Similarity=0.144 Sum_probs=163.3
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEee---cCcceeeeeeeEEE
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET---EGSYTVQQNYTNMD 269 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~l~ 269 (595)
.+.+++||+.. .|+|++++|+++|+||+|.... .. +||.|.+.+.+. ||.+. ++...
T Consensus 23 ~~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~ 82 (339)
T 2zwn_A 23 YKVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQP 82 (339)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCC
T ss_pred EEEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCc
Confidence 35789999863 3999999999999999999864 34 555555666664 99753 34567
Q ss_pred EeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 270 IHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 270 i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|.|||||++.++++ .+| .||++++.....+.....+.+.-++ .... + .+++... +.+..+. .. .|..
T Consensus 83 I~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G~liV--~p~~-~--~~~~~~~---d~e~~l~-l~--d~~~ 149 (339)
T 2zwn_A 83 IEAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWGPLIV--DPKQ-P--LPIEKRV---TKDVIMM-MS--TWES 149 (339)
T ss_dssp BCTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEEEEEE--ECSS-C--CTTGGGC---SEEEEEE-EE--EECG
T ss_pred cCCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceEeEEe--cCCC-c--ccccccC---CceEEEE-ee--heec
Confidence 99999999999998 577 9999987643111100112222222 2111 1 1111110 1111000 00 0111
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCc
Q 007633 350 SAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429 (595)
Q Consensus 350 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~ 429 (595)
... ..+...+ . .......|.|||+.+..
T Consensus 150 ~~~-~~~~~~g----------------~----~~~~~~~~~ING~~~~~------------------------------- 177 (339)
T 2zwn_A 150 AVA-DKYGEGG----------------T----PMNVADYFSVNAKSFPL------------------------------- 177 (339)
T ss_dssp GGT-TCTTCCC----------------S----TTSCCCEEEETTBCTTS-------------------------------
T ss_pred ccc-cccCCCC----------------C----CccccceEEEccccCCC-------------------------------
Confidence 000 0000000 0 00112358889876521
Q ss_pred cceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 430 VDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 430 ~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
...+.++.|++++|.|.|.+...||||||||+|+|++.+.+. +.+|.++||+.|+||+++.|+|++||
T Consensus 178 --~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~ 245 (339)
T 2zwn_A 178 --TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADN 245 (339)
T ss_dssp --SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCS
T ss_pred --cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCC
Confidence 123567889999999999988899999999999999995432 22367899999999999999999999
Q ss_pred cceeEEeeccccc------eeccceEEEEEecC
Q 007633 510 AGIWNLRAENLDT------WYLGQEVYVNVINP 536 (595)
Q Consensus 510 PG~W~~HCHil~H------~~~GM~~~~~V~~~ 536 (595)
||.|+||||+++| ...||++.+++...
T Consensus 246 pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 246 PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999 78999999988643
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=236.09 Aligned_cols=249 Identities=15% Similarity=0.118 Sum_probs=166.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|+.|.... .+.+|.||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5789999874 4999999999999999998764 7788999876553 36799753 23457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||+++..++++ .+| .||.+++.....+... ....+.|.+.... +.+++.. ++.+..+- .. .|.....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~--~Gl~G~lIV~~~~---~~~~~~~---~d~e~~l~-l~--dw~~~~~ 151 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTM--RGMWGPLIVEPKN---PLPIEKT---VTKDYILM-LS--DWVSSWA 151 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHH--SCCEEEEEEECSS---CCHHHHT---CCEEEEEE-EE--EECGGGT
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhcc--CCCEEEEEEcCCC---ccccccc---ccceeEEE-EE--eeccccc
Confidence 99999999997 578 9999988642110000 1122333333211 1011100 01111100 00 1111000
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. .....+ . ..+....|+|||+.|.. .
T Consensus 152 ~-~~~~~~-----------------~---~~~~~d~~~ING~~~~~---------------------------------~ 177 (318)
T 3g5w_A 152 N-KPGEGG-----------------I---PGDVFDYYTINAKSFPE---------------------------------T 177 (318)
T ss_dssp T-CTTCCC-----------------C---TTCCCCEEEETTBCBTS---------------------------------S
T ss_pred c-ccccCC-----------------C---CCCcCcEEEEcCcCCCC---------------------------------C
Confidence 0 000000 0 00012358899987621 1
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|++++|.|.|.+...||||||||.|+|++.+.+. +.+|.++||+.|.||+++.|+|++||||.
T Consensus 178 ~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~ 247 (318)
T 3g5w_A 178 QPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGL 247 (318)
T ss_dssp CCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSE
T ss_pred ccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCee
Confidence 12468899999999999988899999999999999985432 22467899999999999999999999999
Q ss_pred eEEeecccccee------ccceEEEEEecCC
Q 007633 513 WNLRAENLDTWY------LGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H~~------~GM~~~~~V~~~~ 537 (595)
|+||||+++|++ .|||..++|...+
T Consensus 248 w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 248 WMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999998 5888888886543
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=226.65 Aligned_cols=218 Identities=13% Similarity=0.097 Sum_probs=156.6
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCC-----------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQN----------- 285 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~----------- 285 (595)
.|+|++++|+++++++.|... ....+|.||..+.. ..||.. +..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 499999999999999999865 47788999887654 679976 234568999999999999753
Q ss_pred -CCcceEEEEeecccCC-CCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCC
Q 007633 286 -ASSDYYIVASPRFVNS-SEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 286 -~g~~y~i~a~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~ 363 (595)
+| .||.+++...... .........+.|....... .
T Consensus 108 ~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-----~------------------------------------- 144 (276)
T 3kw8_A 108 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-----V------------------------------------- 144 (276)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----C-------------------------------------
T ss_pred CCE-EEEEecCccccccchhhhhCccEEEEEEecCCC-----c-------------------------------------
Confidence 35 7778876532110 0000011222222221100 0
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
..++++.+..+ .|+|||+.|.+ ...+.++.|+.|
T Consensus 145 ----~~drE~~l~l~---------~~~iNG~~~~~---------------------------------~p~i~v~~G~~v 178 (276)
T 3kw8_A 145 ----LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATVGDRV 178 (276)
T ss_dssp ----CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTCEE
T ss_pred ----ccccceEEEec---------ccccceecccC---------------------------------CCCEEEecCCEE
Confidence 00244444321 27899987631 123578899999
Q ss_pred EEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec---CcceeEEeeccc
Q 007633 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD---NAGIWNLRAENL 520 (595)
Q Consensus 444 e~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad---NPG~W~~HCHil 520 (595)
+|+|.|.+...|||||||+.|++++ .|.++.. ...+.++||+.|+|+++..++|+++ |||.|+||||++
T Consensus 179 ri~l~N~~~~~Hp~HlHG~~f~v~~--~G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~ 250 (276)
T 3kw8_A 179 EIVMITHGEYYHTFHMHGHRWADNR--TGILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 250 (276)
T ss_dssp EEEEEEESSCCEEEEETTCCEESSS--SSSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEecCCCcceeEEEccceeEEec--cCccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCc
Confidence 9999999888999999999999875 3433321 1124689999999999999999997 899999999999
Q ss_pred cceeccceEEEEEecCCC
Q 007633 521 DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 521 ~H~~~GM~~~~~V~~~~~ 538 (595)
+|++.|||..++|.+++.
T Consensus 251 ~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 251 SHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp HHHHTTCEEEEEEECTTS
T ss_pred hHhhCCCeEEEEEeCCCC
Confidence 999999999999998764
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=227.97 Aligned_cols=218 Identities=11% Similarity=0.064 Sum_probs=150.3
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC------------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ------------ 284 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~------------ 284 (595)
.|+|++++|++++++|.|.... ...+|.||..+. -+.||.++. .-.|.|||++...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 5999999999999999998764 677888887655 367997542 224789999998888763
Q ss_pred CCCcceEEEEeecccCCCC-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCC
Q 007633 285 NASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 285 ~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~ 363 (595)
.+| .||.+.+........ .......+.|......
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~-------------------------------------------- 164 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG-------------------------------------------- 164 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTT--------------------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEeccc--------------------------------------------
Confidence 245 677776543211100 0000112222221100
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
....++++.+.+. .|.+|+..+.. ...+.++.|+.|
T Consensus 165 --~~~~d~e~~l~~~---------~~~~Ng~~~~~---------------------------------~p~l~v~~Ge~V 200 (299)
T 3t9w_A 165 --DLLPKRQFTVVFN---------DMMINNRAHHD---------------------------------APTFEANLGERV 200 (299)
T ss_dssp --CCCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCEEEEETTCEE
T ss_pred --ccCccccceeeee---------eeeecCccccc---------------------------------cccceecCCCEE
Confidence 0012355555431 37788876521 123567899999
Q ss_pred EEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEE---EEEEEecCcceeEEeeccc
Q 007633 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWT---AILVYLDNAGIWNLRAENL 520 (595)
Q Consensus 444 e~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~---~irf~adNPG~W~~HCHil 520 (595)
+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.|+... +++|++||||.|+||||++
T Consensus 201 r~~liN~~~~~HpfHlHGh~F~v~~~g~~~--------~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 201 EWIAIGHGSNFHTFHLHGHRWLDNRTGMRT--------SEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp EEEEEEESSCCCEEEETTCCEESSSSSSCC--------STTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEEeccccceeeeEecceEEEEeccccc--------CCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 999999999999999999999988775432 22234568999999998654 4556678999999999999
Q ss_pred cceeccceEEEEEecCCC
Q 007633 521 DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 521 ~H~~~GM~~~~~V~~~~~ 538 (595)
+|++.|||..|+|.+++.
T Consensus 273 ~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 273 NHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp HHHHTTCEEEEEEECTTS
T ss_pred HHHhcCCeEEEEEECCCC
Confidence 999999999999987753
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=222.59 Aligned_cols=220 Identities=12% Similarity=0.077 Sum_probs=151.6
Q ss_pred CceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC-----------
Q 007633 216 PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ----------- 284 (595)
Q Consensus 216 ~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~----------- 284 (595)
+.|+|++++|++++++|.|.... ...+|.||..+.- +.||.... .-.|.|||++...+++.+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 35999999999999999998764 6778888876542 56887542 224889999998887753
Q ss_pred -CCCcceEEEEeecccCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCC
Q 007633 285 -NASSDYYIVASPRFVNSSEW-NKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSF 362 (595)
Q Consensus 285 -~~g~~y~i~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~ 362 (595)
.+| .||.+++......... ......+.|......
T Consensus 113 ~~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~------------------------------------------- 148 (313)
T 3tas_A 113 GSAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG------------------------------------------- 148 (313)
T ss_dssp CSCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTT-------------------------------------------
T ss_pred CCce-EEEEeecCcccccchhhhhccccCceEeeccc-------------------------------------------
Confidence 234 6676665432111000 000112222221100
Q ss_pred CcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcE
Q 007633 363 KYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGF 442 (595)
Q Consensus 363 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ 442 (595)
....++++.+.++ .|++|+..+.. ...+.++.|+.
T Consensus 149 ---~~~~d~e~~l~~~---------d~t~Ng~~~~~---------------------------------~~~l~v~~Ge~ 183 (313)
T 3tas_A 149 ---DVLPDRTHTIVFN---------DMTINNRPAHT---------------------------------GPDFEATVGDR 183 (313)
T ss_dssp ---CBCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTCE
T ss_pred ---cccccccceeecc---------chhcccCCccc---------------------------------ccccccccCCE
Confidence 0012345555431 27888765421 11246788999
Q ss_pred EEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe---cCcceeEEeecc
Q 007633 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL---DNAGIWNLRAEN 519 (595)
Q Consensus 443 ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a---dNPG~W~~HCHi 519 (595)
|+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.|++...+++.+ +|||.|+||||+
T Consensus 184 vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi 255 (313)
T 3tas_A 184 VEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHV 255 (313)
T ss_dssp EEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred EEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCC
Confidence 9999999999999999999999998765321 12234778999999999888777654 699999999999
Q ss_pred ccceeccceEEEEEecCCCC
Q 007633 520 LDTWYLGQEVYVNVINPEID 539 (595)
Q Consensus 520 l~H~~~GM~~~~~V~~~~~~ 539 (595)
++|+++|||..|+|..++..
T Consensus 256 ~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 256 QSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp HHHHHTTCEEEEEEECTTCC
T ss_pred hHHHHCCCeEEEEEECCCCC
Confidence 99999999999999988754
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-23 Score=209.75 Aligned_cols=228 Identities=11% Similarity=0.098 Sum_probs=132.6
Q ss_pred eeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee----eeeeeEEEEeccceEEEEEEeCCCCC------
Q 007633 218 QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTDQNAS------ 287 (595)
Q Consensus 218 ~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~~~~g------ 287 (595)
|+|++++|+++++||.|... ..+.+|.||..+.. +.||.+.. +...+...|.||||++..+++++.+|
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 99999999999999999765 47778888777432 67987652 12233567999999999999976532
Q ss_pred --cceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcC
Q 007633 288 --SDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYG 365 (595)
Q Consensus 288 --~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~ 365 (595)
+.||.+++.....+. ...+.+ ++|.+...... ..+.+.. ++.+..+- ... ++. ..
T Consensus 138 ~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~~-~~~~~~~---~d~e~~l~-~~d--~d~---------~~----- 194 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTLT-EDGTQKM---FEKQHVLM-FAV--FDE---------SK----- 194 (306)
T ss_dssp SEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCBC-TTSSBSS---SCCCCCCB-CCE--EET---------TS-----
T ss_pred CceEEEEeccCCchhhh-ccCceE-EEEEccCCCCC-ccCCcCc---ccceEEEE-EEe--ccc---------cc-----
Confidence 399999985321110 011333 34444321100 0011110 01110000 000 000 00
Q ss_pred ccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEE
Q 007633 366 QITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445 (595)
Q Consensus 366 ~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~ 445 (595)
+. .......|.|||+.+.. . ..+.++.|++++|
T Consensus 195 ------------~~--~~~~~~~~~ING~~~~~--~-------------------------------p~l~v~~G~~vrl 227 (306)
T 1sdd_A 195 ------------SW--NQTSSLMYTVNGYVNGT--M-------------------------------PDITVCAHDHISW 227 (306)
T ss_dssp ------------SS--SCCCCEEECSSSCCSSC--C-------------------------------CCCCCCCC-----
T ss_pred ------------cc--ccCCCcceeeCCEecCC--C-------------------------------cceEEcCCCEEEE
Confidence 00 00112357788876521 0 1235778999999
Q ss_pred EEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccce
Q 007633 446 IFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTW 523 (595)
Q Consensus 446 vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~ 523 (595)
.|.|.+.. .|+||+|||.|++ .| .++||+.|.||+.+.|+|.+++||.|+||||+++|+
T Consensus 228 rliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~ 288 (306)
T 1sdd_A 228 HLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHF 288 (306)
T ss_dssp -BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTTG
T ss_pred EEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHH
Confidence 99999764 6999999999986 22 358999999999999999999999999999999999
Q ss_pred eccceEEEEEecC
Q 007633 524 YLGQEVYVNVINP 536 (595)
Q Consensus 524 ~~GM~~~~~V~~~ 536 (595)
+.|||..++|.+.
T Consensus 289 ~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 289 QAGMQAYIDIKNC 301 (306)
T ss_dssp GGTCBCCC-----
T ss_pred hcCCeEEEEEecC
Confidence 9999999998743
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=8e-21 Score=214.03 Aligned_cols=247 Identities=11% Similarity=0.162 Sum_probs=146.6
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee---e-eeeeEEEEeccceEEEEEEeCCCCC----c
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV---Q-QNYTNMDIHVGQSFSFLVTTDQNAS----S 288 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~l~i~pGqR~dvlv~~~~~~g----~ 288 (595)
.|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++..| +
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 4999999999999999999864 667777776654 578997642 1 2234567999999999999987532 4
Q ss_pred ----ceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc-cccccccCCCCCCCCCCCC
Q 007633 289 ----DYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS-IRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 289 ----~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~-~~~~l~~~~~~p~p~~~~~ 363 (595)
.||.+++.....+. ...+.+ ++|.............|... .+....+..... -.|.+.. +..
T Consensus 146 ~~c~T~wYHsH~~~~~q~-~~GL~G-~lIV~~~~~~~~~~~~~~~~--~e~~l~l~~~d~~~~w~~~~-----~~~---- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDI-HSGLIG-PLLICRKGTLDKETNMPVDM--REFVLLFMVFDEKKSWYYDK-----KPT---- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHH-TTTCEE-EEEEECTTSSCTTSCCCSSC--CEEEEEEEEEEGGGSSCCC-------------
T ss_pred CCceEEEEccCCCCcccc-cccCcc-CEEEeeCCCcccccCCCCcc--eeEEEEEEeecCcccccccc-----Ccc----
Confidence 79999987421110 011333 33333321111111111110 011001100000 0111100 000
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
..+.... .. .......+.|||+.+. . +.+.++.|+++
T Consensus 213 -------~~~~~~~-~~-~~~~~~~~~iNG~~~~---~-------------------------------p~l~v~~G~~v 249 (647)
T 1sdd_B 213 -------RSWRRAS-SE-VKNSHEFHAINGMIYN---L-------------------------------PGLRMYEQEWV 249 (647)
T ss_dssp --------------------CCCEEEEETTBSSC---C-------------------------------CCCEEETTCEE
T ss_pred -------cccccCC-cc-hhhcCceeccCCEecC---C-------------------------------CCeEEcCCCEE
Confidence 0000000 00 0011245788887651 0 12467889999
Q ss_pred EEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeecccc
Q 007633 444 EIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLD 521 (595)
Q Consensus 444 e~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~ 521 (595)
+|.|.|.+. ..|+||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||+.+
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~ 313 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE 313 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccc
Confidence 999999875 379999999999998542 45799999999999999999999999999999999
Q ss_pred ceeccceEEEEEecCC
Q 007633 522 TWYLGQEVYVNVINPE 537 (595)
Q Consensus 522 H~~~GM~~~~~V~~~~ 537 (595)
|+++|||..|.|.+++
T Consensus 314 h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 314 IQRAGMQTPFLIVDRE 329 (647)
T ss_dssp HHTTTCEEEEEEECTT
T ss_pred ccccccccceeeeccc
Confidence 9999999999997543
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=188.07 Aligned_cols=248 Identities=18% Similarity=0.112 Sum_probs=161.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5789999864 3899999999999999999763 47788888863 5788642 124899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||++++.+++++ +| .||.+++...........+.+ +++.+. .. ++|. ++.+..+-. -+|.....
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p~----~d~e~~l~~---~d~~~~~~ 179 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLPK----VDKEFYIVQ---GDFYTKGK 179 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCCC----CSEEEEEEE---EEECBSSC
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCCC----CceEEEEEe---eeeeccCc
Confidence 999999999985 67 999998753110000001222 333332 11 2222 121111100 01111100
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. ... +....+ +.... ... ...+.+||+.+... ..
T Consensus 180 ~---~~~-----g~~~~~----~~~~~--~~~-~~~~~iNG~~~~~~-------------------------------~~ 213 (327)
T 1kbv_A 180 K---GAQ-----GLQPFD----MDKAV--AEQ-PEYVVFNGHVGALT-------------------------------GD 213 (327)
T ss_dssp T---TCC-----EEECBC----HHHHH--HTC-CSEEEETTSTTTTS-------------------------------GG
T ss_pred c---ccc-----cccccC----hhHhc--cCC-CceEEEcCcccCCC-------------------------------Cc
Confidence 0 000 000000 00000 011 13577888765210 01
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
..+.++.|++++|.|.|.+. ..|+||+|||.|+|++.+.+.. +|.++|++.|.||+...|.|++++||
T Consensus 214 ~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCE
T ss_pred eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCe
Confidence 24578899999999999864 6799999999999999975521 25689999999999999999999999
Q ss_pred eeEEeeccccce-eccceEEEEEecCC
Q 007633 512 IWNLRAENLDTW-YLGQEVYVNVINPE 537 (595)
Q Consensus 512 ~W~~HCHil~H~-~~GM~~~~~V~~~~ 537 (595)
.|.+|||+.+|. ..||++.++|....
T Consensus 283 ~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 283 NYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999995 78999999997554
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=185.23 Aligned_cols=260 Identities=15% Similarity=0.170 Sum_probs=156.3
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEe
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~ 271 (595)
.+.+++||+.. .|+|++++|+++|+|+.|.... ..|.++++++.. +.||..+ + .|.
T Consensus 59 ~~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~ 115 (340)
T 2bw4_A 59 IHAMTFNGSVP-------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVN 115 (340)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBC
T ss_pred EEEEEECCCCC-------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeC
Confidence 35789999853 3899999999999999998742 456677777542 2344332 1 399
Q ss_pred ccceEEEEEEeCCCCCcceEEEEeeccc--CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 272 VGQSFSFLVTTDQNASSDYYIVASPRFV--NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 272 pGqR~dvlv~~~~~~g~~y~i~a~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|||++++.+++++ +| .||.+++.... .+. ...+.+ +++.+.....+...+.|. .++.+..+. .-.|.+
T Consensus 116 PG~~~~y~~~~~~-~G-t~wyH~h~~~~~~~~~-~~Gl~G-~~iV~~~~~~~~~~~~p~---~~d~e~~l~---l~D~~~ 185 (340)
T 2bw4_A 116 PGEETTLRFKATK-PG-VFVYHCAPEGMVPWHV-TSGMNG-AIMVLPRDGLKDEKGQPL---TYDKIYYVG---EQDFYV 185 (340)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEE-EEEEECTBCEECTTSCEE---CCSEEEEEE---EEEECC
T ss_pred CCCEEEEEEECCC-Ce-EEEEEcCCCCchhhHH-hCcCEE-EEEEccCcCcccccCCCc---CcceeEEEe---eeeeee
Confidence 9999999999985 78 99999986421 000 011323 233332111000000111 112111110 001111
Q ss_pred ccCCCCCCCCCCCC-cCcc--ceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCC
Q 007633 350 SAGAARPNPQGSFK-YGQI--TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR 426 (595)
Q Consensus 350 ~~~~~~p~p~~~~~-~~~~--~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~ 426 (595)
. ..+.+.+. +... ..... +.... .. ....|.|||+.+...
T Consensus 186 ~-----~~~~g~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~~iNG~~~~~~--------------------------- 228 (340)
T 2bw4_A 186 P-----KDEAGNYKKYETPGEAYEDA--VKAMR--TL-TPTHIVFNGAVGALT--------------------------- 228 (340)
T ss_dssp C-----BCTTSCBCCCCSHHHHHHHH--HHHHH--TT-CCSEEEETTSTTTTS---------------------------
T ss_pred c-----cccCCcccccccccccccch--hhHhh--cC-CCCEEEECCccCCcc---------------------------
Confidence 0 00011000 0000 00000 00000 00 113578888765210
Q ss_pred CCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC--cccEEEeCCCcEEEEE
Q 007633 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV--ARSTTQVFPGAWTAIL 504 (595)
Q Consensus 427 ~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~v~p~g~~~ir 504 (595)
....+.++.|+.++|++.|.+...|++|+|||.|+|+. .|.+. +++ +.||+.|.||+.+.|.
T Consensus 229 ----~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 229 ----GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp ----GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEE
T ss_pred ----CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEE
Confidence 01235788899999988888777899999999999985 33221 122 4699999999999999
Q ss_pred EEecCcceeEEeeccc-cceeccceEEEEEecCCC
Q 007633 505 VYLDNAGIWNLRAENL-DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 505 f~adNPG~W~~HCHil-~H~~~GM~~~~~V~~~~~ 538 (595)
|.+++||.|+||||++ +|++.|||..++|..++.
T Consensus 293 v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 293 YTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9999999999999999 699999999999986543
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-21 Score=220.48 Aligned_cols=245 Identities=11% Similarity=0.134 Sum_probs=150.3
Q ss_pred CceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC---------CC
Q 007633 216 PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ---------NA 286 (595)
Q Consensus 216 ~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~---------~~ 286 (595)
..|.|+++.|++++++|.|... ..+.+|.||..+....-||..- ....|.||++++..+++++ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 4599999999999999999976 4677788877665444358642 2246899999999998875 45
Q ss_pred CcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccc----cccccCC--CCCCCCC
Q 007633 287 SSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIR----WNVSAGA--ARPNPQG 360 (595)
Q Consensus 287 g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~----~~l~~~~--~~p~p~~ 360 (595)
| .||.+.+.....+. ...+.+ ++|.............+. .+.++.+-. ..+. |.+.... ..+.|..
T Consensus 271 G-t~wYHsh~~~~~q~-~~GL~G-~liV~~~~~~~~~~~~~~----~d~E~vl~~-~~~de~~swy~~~~~~~~~~~p~~ 342 (770)
T 2r7e_B 271 K-AWAYSSDVDLEKDV-HSGLIG-PLLVCHTNTLNPAHGRQV----TVQEFALFF-TIFDETKSWYFTENMERNCRAPCN 342 (770)
T ss_dssp E-EEEECCCSSSSHHH-HTSCCE-EEEEECSTTSCSSSCCCC----SSEEEECCC-CEECCSSSSCTTGGGSSCSCCSSC
T ss_pred e-eEEeeccCCcHHHH-hCCcee-eEEECCCcccccccCCCc----cceEEEEEE-eecCccccchhccchhhcccCccc
Confidence 6 89998876532110 011222 233222111000000000 011110000 0000 0000000 0000100
Q ss_pred CCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCC
Q 007633 361 SFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
... ..+. .......|+|||..+. ....+.++.|
T Consensus 343 ------~~~-------~d~~-~~~~~~~~~ING~~~~---------------------------------~~~~l~v~~G 375 (770)
T 2r7e_B 343 ------IQM-------EDPT-FKENYRFHAINGYIMD---------------------------------TLPGLVMAQD 375 (770)
T ss_dssp ------CCS-------SSSS-STTTSCEECTTSCTTT---------------------------------TCCCCCCCSS
T ss_pred ------ccc-------CCcc-ccccCCccccCCccCC---------------------------------CCCCeEEeCC
Confidence 000 0000 0111224666665431 1223467899
Q ss_pred cEEEEEEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeec
Q 007633 441 GFMEIIFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAE 518 (595)
Q Consensus 441 ~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCH 518 (595)
+.++|.|.|.+.. .||||||||.|+|++.+ +.++||+.|+|++++.|+|++||||.|+||||
T Consensus 376 e~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH 439 (770)
T 2r7e_B 376 QRIRWYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECL 439 (770)
T ss_dssp SCEEEECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCC
T ss_pred CEEEEEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEec
Confidence 9999999998753 79999999999998763 12799999999999999999999999999999
Q ss_pred cccceeccceEEEEEecCC
Q 007633 519 NLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 519 il~H~~~GM~~~~~V~~~~ 537 (595)
+++|++.|||..|.|...+
T Consensus 440 ~~~H~~~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 440 IGEHLHAGMSTLFLVYSNK 458 (770)
T ss_dssp SHHHHTTBCCCCCCBCCSS
T ss_pred ccccccccccccccccccc
Confidence 9999999999999986433
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=173.27 Aligned_cols=262 Identities=14% Similarity=0.104 Sum_probs=149.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|.|++++|+++++|+.|.+.. ..|.++++++. ..||.. +. + .|.|
T Consensus 53 ~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~P 109 (333)
T 1mzy_A 53 QAMTFDGSIP-------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINP 109 (333)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCT
T ss_pred EEEEECCccC-------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCC
Confidence 5789999864 3999999999999999999642 23445555432 123221 11 1 3899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecc--c-CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRF--V-NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~--~-~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|+++++.+++++ +| .||.+++... . .+. ...+.+.-|++ .... ...+.+ .+..++.+..+- .. .|..
T Consensus 110 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~~-~~Gl~G~~iV~--~~~~-~~~~~~-~p~~~d~e~~l~-l~--D~~~ 179 (333)
T 1mzy_A 110 GEKVVLRFKATR-AG-AFVYHCAPGGPMIPWHV-VSGMAGCIMVL--PRDG-LKDHEG-KPVRYDTVYYIG-ES--DHYI 179 (333)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSTTHHHHHH-HTTCEEEEEEE--CTTC-CBCTTS-CBCCCSEEEEEE-EE--EECC
T ss_pred CCEEEEEEECCC-CE-EEEEeecCCcccchhhh-hCCCEEEEEEc--cCcC-cccccc-CCCccchheeee-ee--eecc
Confidence 999999999974 78 9999998642 0 000 01133333333 2111 000010 011112111110 00 1111
Q ss_pred ccCCCCCCCCCCCC-cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCC
Q 007633 350 SAGAARPNPQGSFK-YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428 (595)
Q Consensus 350 ~~~~~~p~p~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~ 428 (595)
.. ...+.+. +.... . .+.-..... .......|.|||+.+..+
T Consensus 180 ~~-----~~~g~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~ING~~~~~~----------------------------- 222 (333)
T 1mzy_A 180 PK-----DEDGTYMRFSDPS-E-GYEDMVAVM-DTLIPSHIVFNGAVGALT----------------------------- 222 (333)
T ss_dssp CB-----CTTSCBCCCSSHH-H-HHHHHHHHH-TTTCCSEEEETTSTTTTS-----------------------------
T ss_pred Cc-----ccccccccccccc-c-cccchhHHh-hccCCcEEEECCcccccC-----------------------------
Confidence 00 0000000 00000 0 000000000 000123578888764210
Q ss_pred ccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC-cccEEEeCCCcEEEEEEEe
Q 007633 429 KVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV-ARSTTQVFPGAWTAILVYL 507 (595)
Q Consensus 429 ~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~v~p~g~~~irf~a 507 (595)
+...+.++.|+.++|+..|.+...|++++|+|.|.|++ .|.+.+ .|. ++||+.|.||+.+.+.|.+
T Consensus 223 --~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~~---------~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 223 --GEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE--TGKFHN---------APERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp --GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTTS---------CCEEEESBCCBCTTEEEEEEEEC
T ss_pred --CCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe--CCcccC---------CCccCcceEEECCCceEEEEEEc
Confidence 01235678899999888776555556667888898886 343221 122 4899999999999999999
Q ss_pred cCcceeEEeeccccce-eccceEEEEEecCCC
Q 007633 508 DNAGIWNLRAENLDTW-YLGQEVYVNVINPEI 538 (595)
Q Consensus 508 dNPG~W~~HCHil~H~-~~GM~~~~~V~~~~~ 538 (595)
++||.|+||||+++|+ +.|||..++|..+..
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999997 999999999986543
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.1e-17 Score=174.43 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=161.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|.|++++|+++++||.|.... ..+.+|+||+. ..||... +..|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5789999873 3899999999999999998643 57889999975 3688642 235899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
|+++++.++++ .+| .||++++....... ......+.+.+.... ++|. ++.+..+- .. .|.....
T Consensus 106 g~~~~y~f~~~-~~G-t~~yH~H~~~~~~~--~~~Gl~G~~iv~~~~-----~~~~----~d~e~~l~-l~--d~~~~~~ 169 (442)
T 2zoo_A 106 GHTSTFNFKAL-NPG-LYIYHCATAPVGMH--IANGMYGLILVEPKE-----GLAP----VDREYYLV-QG--DFYTKGE 169 (442)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHH--HHTTCEEEEEEECTT-----CCCC----CSEEEEEE-EE--EECBSSC
T ss_pred CCEEEEEEEcC-CCe-EEEEecCCCChHHH--HhCccEEEEEEeCCC-----CCCC----CCceEEEE-ee--eeeccCc
Confidence 99999999987 478 99999964210000 001223444443221 1221 12111110 00 1111100
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. +... ...+.+... .......+.|||+.+... ..
T Consensus 170 ~-----------~~~~-~~~~~~~~~---~~~~~~~~liNG~~~~~~-------------------------------~~ 203 (442)
T 2zoo_A 170 F-----------GEAG-LQPFDMAKA---IDEDADYVVFNGSVGSTT-------------------------------DE 203 (442)
T ss_dssp T-----------TCCE-EECBCHHHH---HTTCCSEEEETTSTTTTS-------------------------------GG
T ss_pred c-----------cccc-cccCChhHh---ccCCCCEEEECCCcCCCC-------------------------------CC
Confidence 0 0000 000000000 000113567888754210 01
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
..+.++.|+++.|.|.|.+. ..|+||+||+.|.|++.+.+.. .|.+.|++.|.||+...+.|.+++||
T Consensus 204 ~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G 272 (442)
T 2zoo_A 204 NSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPG 272 (442)
T ss_dssp GCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCE
T ss_pred CceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCC
Confidence 23567889999999999764 6799999999999999865421 25678999999999999999999999
Q ss_pred eeEEeeccccc-eeccceEEEEEecCCC
Q 007633 512 IWNLRAENLDT-WYLGQEVYVNVINPEI 538 (595)
Q Consensus 512 ~W~~HCHil~H-~~~GM~~~~~V~~~~~ 538 (595)
.|.+|||...| .+.||+..++|...+.
T Consensus 273 ~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 273 TFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred eEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999 5899999999976553
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=163.98 Aligned_cols=259 Identities=15% Similarity=0.198 Sum_probs=153.3
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|+.|.... ..|.++++|+.. +.||..+ + .|.|
T Consensus 54 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~p 110 (336)
T 1oe1_A 54 QAMTFNGSMP-------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNP 110 (336)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred EEEEECCccC-------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCC
Confidence 5789999853 3899999999999999998753 477789988753 2233332 1 3899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeeccc--CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFV--NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVS 350 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~ 350 (595)
||++++.+++++ +| .||.+++.... .+. ...+.+.-|++-.... ..+.+. +..++.+..+- .. .|.+.
T Consensus 111 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~-~~Gl~G~liV~~~~~~---~~~~~~-~~~~D~e~~l~-~~--D~~~~ 180 (336)
T 1oe1_A 111 GEQATLRFKADR-SG-TFVYHCAPEGMVPWHV-VSGMSGTLMVLPRDGL---KDPQGK-PLHYDRAYTIG-EF--DLYIP 180 (336)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEEEEEECTTCC---BCTTSC-BCCCSEEEEEE-EE--EECCC
T ss_pred CCEEEEEEECCC-Ce-EEEEecCCCCchhHHH-hCCCeEEEEEecCcCC---cccccC-cccCCceeEee-ee--eeeec
Confidence 999999999985 78 99999986421 000 0113333333322110 001111 11112111100 00 01000
Q ss_pred cCCCCCCCCCCC-CcCcc-ce-eEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 351 AGAARPNPQGSF-KYGQI-TV-TDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 351 ~~~~~p~p~~~~-~~~~~-~~-~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
. ...+.+ .+... .. ... +.... ... ...+.|||+.+...
T Consensus 181 ~-----~~~g~~~~~~~~~~~~~~~--~~~~~--~~~-~~~~liNG~~~~~~---------------------------- 222 (336)
T 1oe1_A 181 K-----GPDGKYKDYATLAESYGDT--VQVMR--TLT-PSHIVFNGKVGALT---------------------------- 222 (336)
T ss_dssp B-----CTTSSBCCCSSTGGGHHHH--HHHHH--TTC-CSEEEETTSTTTTS----------------------------
T ss_pred c-----ccCCceeecccccccccch--hhHhh--cCC-CCEEEECCeeccCC----------------------------
Confidence 0 000000 00000 00 000 00000 001 12466676654110
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC--cccEEEeCCCcEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV--ARSTTQVFPGAWTAILV 505 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~v~p~g~~~irf 505 (595)
+...+.++.|+.+.|+..+.+...+++++|||.|.|+. +|.+. +|. +.||+.|++|+...+.+
T Consensus 223 ---~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 223 ---GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp ---GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ---CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEEE
Confidence 12346788899999877766666677778999999985 44321 122 46999999999999999
Q ss_pred EecCcceeEEeeccccce-eccceEEEEEecCCC
Q 007633 506 YLDNAGIWNLRAENLDTW-YLGQEVYVNVINPEI 538 (595)
Q Consensus 506 ~adNPG~W~~HCHil~H~-~~GM~~~~~V~~~~~ 538 (595)
.+++||.|+||||.+.|. +.||+..++|...+.
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999999999999886 999999999986543
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6.3e-17 Score=138.48 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=72.8
Q ss_pred CCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCC--CCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 57 GQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN--SWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 57 g~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
-+|++|+|++++||+|+ +.|..+.++++||||..+... ..+||.+.+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 46789999999999975 679998999999999865321 0123332345789999999999998668999999999
Q ss_pred chhhhcCceeeEEEec
Q 007633 135 DFQRAAGGYGGIIINN 150 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~~ 150 (595)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 677889999999974
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4e-14 Score=152.35 Aligned_cols=238 Identities=13% Similarity=0.054 Sum_probs=153.2
Q ss_pred eEEEEEEEEEEEecCCCe-----------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCCCC
Q 007633 31 YVFYDWTISYVTASPLGD-----------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRKNS 97 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~G~-----------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~ 97 (595)
.+++.|.++......+|. .-..++|||+. .|+|+|++| ++++|+.|... ..+.+|+ ||.... --
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~-vi 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLH-VI 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEE-EE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEE-EE
Confidence 456778887766554442 34679999994 799999999 99999999975 5678999 886543 24
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCce-----------eeEE-EeccCCCCCCCC
Q 007633 98 WQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGY-----------GGII-INNRDVIPLPFA 159 (595)
Q Consensus 98 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~~~~ 159 (595)
..||.+ . .+..|.|||+++..++++ +.|+||++++........+. .+++ ........ +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 579963 2 557899999999999995 68999999986543221111 1221 11111000 00
Q ss_pred CCCCceeEeeeccccccHH-HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC
Q 007633 160 VPDGDITIFISDWYTKSHK-KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS 238 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~~-~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~ 238 (595)
..+++..+..+..-... .....+.-. ..++|||+.+.. ..+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~----------~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV----------NRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT----------TCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC----------CCCcEEcCCCCEEEEEEECC---
Confidence 00000001110000000 000000000 036799998721 23568999999999999997
Q ss_pred ceeeEEEeCCceeEEeecCcce---eeeeeeEEEEeccceEEEEEEeCCCCC---cceEEEEeecc
Q 007633 239 TSLNFRIQNHNLLLVETEGSYT---VQQNYTNMDIHVGQSFSFLVTTDQNAS---SDYYIVASPRF 298 (595)
Q Consensus 239 ~~~~~~i~gh~~~via~DG~~~---~p~~~d~l~i~pGqR~dvlv~~~~~~g---~~y~i~a~~~~ 298 (595)
..|.||||||.|+|++.||... +|...|++.| |+++.|.+++++ +| ..|.++++...
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSHH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCchh
Confidence 4899999999999999999865 3678999999 999999999985 44 14999998754
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=147.95 Aligned_cols=231 Identities=12% Similarity=0.067 Sum_probs=160.5
Q ss_pred eEEEEEEEEEEEecCC------------CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCC
Q 007633 31 YVFYDWTISYVTASPL------------GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNS 97 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~------------G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 97 (595)
.+++.|.++......+ |..-..+++||+. .|.|+|++| ++++|+.|... ..+.+|++|..... -
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 4567777665443321 3334678999996 699999999 99999999975 46789999976532 4
Q ss_pred CCCCCCC------CCCccCCCCeEEEEEEECCceeeeEEccCcchh--hh-cCc--------------eeeEEEeccCC-
Q 007633 98 WQDGVLG------TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ--RA-AGG--------------YGGIIINNRDV- 153 (595)
Q Consensus 98 ~~DGv~~------tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~~~~~- 153 (595)
..||.+. ....|.|||+++..++++ ++|.||++|+.... .. .|| ....+++-...
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 5788752 346699999999999995 69999999974211 10 122 11222222111
Q ss_pred CCCCCCC---CC---------CceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEE
Q 007633 154 IPLPFAV---PD---------GDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLIN 221 (595)
Q Consensus 154 ~~~~~~~---~d---------~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~ 221 (595)
.+.+.+. +. +++.+-+. . ....+.|||+.+.. ..+.+.
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~~-----------------~---~g~~~~iNg~~~~~----------~~~~~~ 351 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTED-----------------M---MAARFFINGQVFDH----------RRVDLK 351 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEEE-----------------G---GGTEEEETTBCCCT----------TCCCEE
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEee-----------------c---cCceEeECCEECCC----------CCCcee
Confidence 1111100 00 01111100 0 01368999998721 224589
Q ss_pred EecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 222 VEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 222 v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++.|++++|+|.|.+. ..|.||+|||.|+|++.+|... +|...|++.+.||+++.+.++++ .+| .|.++++...
T Consensus 352 ~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG-~w~~HCHil~ 426 (439)
T 2xu9_A 352 GQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKG-RTVFHCHIVE 426 (439)
T ss_dssp ECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred cCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCC-CEEEECCcch
Confidence 9999999999999876 4899999999999999999765 48889999999999999999977 678 8999998753
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-12 Score=142.47 Aligned_cols=240 Identities=14% Similarity=0.125 Sum_probs=154.1
Q ss_pred EEEEEcCCCC---------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 51 QVIGINGQFP---------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 51 ~~~~~Ng~~P---------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
..++|||+.. -|+|+|++|+++++|+.|... ..+.+|++|.... --..||.+. ....|.|||++
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~p~~~~~l~l~pgqR~ 270 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMT-VIEVDGVSHQPLTVDSLTIFAGQRY 270 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE-EEEETTEEEEEEEESBEEECTTCEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEE-EEecCCccccceeeeeEEEcccceE
Confidence 5789999843 189999999999999999976 5678999987553 245789752 34569999999
Q ss_pred EEEEEECCceeeeEEccCcch---hhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccH--H---------HHH
Q 007633 116 TYQFQVKDQIGSFFYFPSLDF---QRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSH--K---------KLR 181 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~--~---------~l~ 181 (595)
+..+++++.+|.||.+++... ....|+..+++.........|..... +. ..+.+...... . ...
T Consensus 271 dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 271 SVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcce
Confidence 999999655799999998541 12234434555443221111110000 00 00000000000 0 000
Q ss_pred H--HHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 182 K--DVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 182 ~--~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
. .+..+.. .....+.|||+.+..-... ........+.++++.|++++++++| ...|.||+|||
T Consensus 349 ~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 349 INLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp EEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred EEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 0000000 1112578999986321000 0000012467899999999999999 35899999999
Q ss_pred ceeEEeecCcc----eeeeeeeEEEE-eccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 249 NLLLVETEGSY----TVQQNYTNMDI-HVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 249 ~~~via~DG~~----~~p~~~d~l~i-~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
.|+|++.+|.. .+|...|++.+ .+|+++.|.++++ ++| .|.++++....
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG-~W~~HCHi~~H 478 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPG-PWFLHCHIDWH 478 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCE-EEEEEESCHHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCe-eEEEeeChHHH
Confidence 99999998865 35888999999 7999999999988 578 89999987543
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-12 Score=140.51 Aligned_cols=261 Identities=13% Similarity=0.086 Sum_probs=163.9
Q ss_pred EEEEEEEEEEecCCCe-----eEEEEEEcCCCC--------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCC
Q 007633 33 FYDWTISYVTASPLGD-----KQQVIGINGQFP--------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSW 98 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~-----~~~~~~~Ng~~P--------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~ 98 (595)
++.|.++......++. .-..++|||+.. .|+|+|++|+++++|+.|... ..+.+|++|....- -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4566666554444332 235689999853 289999999999999999975 56789998875532 46
Q ss_pred CCCCC---C--CCCccCCCCeEEEEEEECCceeeeEEccCcch--h-----hhcCceeeEEEeccCCCCCCCCCCCCcee
Q 007633 99 QDGVL---G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF--Q-----RAAGGYGGIIINNRDVIPLPFAVPDGDIT 166 (595)
Q Consensus 99 ~DGv~---~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~d~e~~ 166 (595)
.||.+ . ....|.|||+++..+++++.+|.||.+++... + ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 79975 2 34568999999999999655799999997531 1 2234434444443221111110000000
Q ss_pred EeeeccccccH--HHHH---------HHHhCCCCCCCCCeEEEcCCCCCCCCCC-----CCC------CCCCceeEEEec
Q 007633 167 IFISDWYTKSH--KKLR---------KDVENGVDLGVPDGILINGLGPYRYDAA-----IVP------DGIPYQLINVEP 224 (595)
Q Consensus 167 l~l~d~~~~~~--~~l~---------~~~~~g~~~~~~d~~liNG~~~~~~~~~-----~~~------~~~~~~~l~v~~ 224 (595)
..+.++..... .... ..+..... .....+.|||+.+..-... ..+ .......++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00011000000 0000 00000000 0012688999986321000 000 001246789999
Q ss_pred CcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce----eeeeeeEEEE-eccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 225 GKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT----VQQNYTNMDI-HVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 225 G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~l~i-~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
|++++++++|......|.||+|||.|+|++.+|... +|...|++.| .+|+++.|.++++ ++| .|.++++...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG-~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPG-PWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCe-eeeEecCchh
Confidence 999999999655456899999999999999998652 5888999999 7999999999988 578 8999998754
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=124.86 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=74.1
Q ss_pred CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC------CC--CCCccCCCC--eEE
Q 007633 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV------LG--TNCPIPAGW--NWT 116 (595)
Q Consensus 47 G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv------~~--tq~~I~PG~--~~~ 116 (595)
|.....+.++|. |+|+|+|++||+|+++++|..+ ...|.+.+.+.++.+.+.. ++ ...+|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444445566766 6799999999999999999733 4467777765544443211 11 012789999 999
Q ss_pred EEEEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 117 YQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 117 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99997 79999999999999999999999984
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-12 Score=112.09 Aligned_cols=104 Identities=21% Similarity=0.117 Sum_probs=78.9
Q ss_pred EEEEEEEEEEe-----cCCCeeEEE-EEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 33 FYDWTISYVTA-----SPLGDKQQV-IGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 33 ~~~l~~~~~~~-----~~~G~~~~~-~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
.|++.+.+... ..+|+.... ..+|++|++|.|++++||+|+++++|.... +||+.... .|+ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~ 70 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---Q 70 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---E
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---e
Confidence 45555555433 345677666 489999999999999999999999999765 45543321 122 3
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
..+.||++++|.|++ +++|+||||||...+... |.|.|+|.+
T Consensus 71 ~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 71 EVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 679999999999998 689999999997654433 999999974
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.7e-11 Score=132.28 Aligned_cols=237 Identities=16% Similarity=0.094 Sum_probs=158.9
Q ss_pred EEEEEEEEEEEecCCCe-------------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCC
Q 007633 32 VFYDWTISYVTASPLGD-------------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNS 97 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~-------------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 97 (595)
..| |.++......+|. .-..+++||+. .|+|.|++|+ ++|+.|... ..+.+|++|.... --
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~-vI 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFI-LV 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEE-EE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceE-EE
Confidence 445 7777666555553 23578999995 6899999999 999999874 6788999998743 35
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCce--------eeEEEeccC-CCCCC-----
Q 007633 98 WQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGY--------GGIIINNRD-VIPLP----- 157 (595)
Q Consensus 98 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~~-~~~~~----- 157 (595)
..||.. . ....|.|||+++..++++ +.|+|-.-++.... .|+. -.+.+.... ..+.|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 678742 2 446799999999999995 67887776653211 1111 111222111 11111
Q ss_pred ---CCCCCCceeEeeeccccc-------cHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 158 ---FAVPDGDITIFISDWYTK-------SHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 158 ---~~~~d~e~~l~l~d~~~~-------~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
.+..+.+..+.++....+ ........+ ...++|||+.+. .+.+.++++.|++
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iNG~~~~----------~~~~~~~~~~G~~ 394 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL--------ASMFLINRKSYD----------LKRIDLSSKLGVV 394 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH--------HTTEEETTBCCC----------TTCCCEEEETTCC
T ss_pred CCCCCCCCcEEEEEEeccchhcccccccccccccccc--------cceeEECCEeCC----------CCCceEEeCCCCE
Confidence 111222333333321100 000000000 124899999872 1346799999999
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEee--cCccee---eeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVET--EGSYTV---QQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
++|+|.|.+. ..|.||||||.|+|++. ||.... +...|++.+.|||++.|.++++ .+| .|.++++..
T Consensus 395 v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 395 EDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 9999999665 58999999999999999 997764 4678999999999999999997 678 899999764
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.2e-11 Score=129.15 Aligned_cols=244 Identities=12% Similarity=0.110 Sum_probs=152.7
Q ss_pred EEEEEEcCCC---------CCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCe
Q 007633 50 QQVIGINGQF---------PGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWN 114 (595)
Q Consensus 50 ~~~~~~Ng~~---------PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 114 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|.... --..||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~-via~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMT-IIETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE-EEEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEE-EEEeCCcccCCEEeeeEEEcCceE
Confidence 4679999973 3479999999999999999764 5678899887643 246789752 3356999999
Q ss_pred EEEEEEECCceeeeEEccCcc--h-hhhcCceeeEEEeccCCCCCCCCCCCC-ceeEeeeccccccHHH-----------
Q 007633 115 WTYQFQVKDQIGSFFYFPSLD--F-QRAAGGYGGIIINNRDVIPLPFAVPDG-DITIFISDWYTKSHKK----------- 179 (595)
Q Consensus 115 ~~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~l~d~~~~~~~~----------- 179 (595)
++..+++++.+|.||.++... . ....|..-+++.........|...... ... .+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCC
Confidence 999999965569999998642 1 122233334444432221111100000 000 001110000000
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
....+..... .....+.|||+.+..-... ..........+.++.|++++|.|.|......|.||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 0012588999886321000 000001235789999999999998433445899999999
Q ss_pred ceeEEeecCcce----eeeeeeEEEEec-cceEEEEEEeCCCCCcceEEEEeecc
Q 007633 249 NLLLVETEGSYT----VQQNYTNMDIHV-GQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 249 ~~~via~DG~~~----~p~~~d~l~i~p-GqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ ++| .|.++++...
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG-~W~~HCHi~~ 457 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPG-PWFLHCHIDW 457 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESCHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCe-eEEEEecchh
Confidence 999999988644 588899999997 99999999988 678 8889998754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.5e-12 Score=139.10 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=74.8
Q ss_pred CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCce
Q 007633 46 LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI 125 (595)
Q Consensus 46 ~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 125 (595)
+++...+|++|++||+|+|++++||+|+++++|..+..-. +||+.... .|+ ++.|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4678899999999999999999999999999998653111 24443321 122 2679999999999999 699
Q ss_pred eeeEEccCc---chhhhcCceeeEEEeccC
Q 007633 126 GSFFYFPSL---DFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 126 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 152 (595)
|+||||||. ..|. ||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 999999993 2443 999999999853
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.2e-10 Score=125.55 Aligned_cols=244 Identities=11% Similarity=0.109 Sum_probs=149.5
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEECC
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~ 123 (595)
...++|||+. .|+|+|++|+++++|+.|... ....+|.+|..+. --..||.+. ....|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMT-VVEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeE-EEeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3578999995 699999999999999999975 5677888887543 245788752 3466999999999999963
Q ss_pred c-eeeeEEccCcchhhhc------CceeeEEEeccCCCCCCCCCCCCceeEeeeccccccH--HHH----HH--HHh--C
Q 007633 124 Q-IGSFFYFPSLDFQRAA------GGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSH--KKL----RK--DVE--N 186 (595)
Q Consensus 124 ~-~Gt~wYH~H~~~q~~~------Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~--~~l----~~--~~~--~ 186 (595)
+ .|.||..........+ ...+..+++=....+.|-+....++.-.+.|...... ..+ .. .+. .
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 5789998765422110 1122223321111111100000000000000000000 000 00 000 0
Q ss_pred CCCCCCCCeEEEcCCCCCCCCCC------------CCCC--CCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE
Q 007633 187 GVDLGVPDGILINGLGPYRYDAA------------IVPD--GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL 252 (595)
Q Consensus 187 g~~~~~~d~~liNG~~~~~~~~~------------~~~~--~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v 252 (595)
.........++|||+.+..-... ..+. ......+.++.|++++|.|.|.+. ..|.||+|||.|+|
T Consensus 325 ~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~V 403 (534)
T 1zpu_A 325 DNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQT 403 (534)
T ss_dssp EECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEEE
T ss_pred eccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceEE
Confidence 00001123578999876321000 0000 001356899999999999999875 48999999999999
Q ss_pred EeecCc-----------c---------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 253 VETEGS-----------Y---------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 253 ia~DG~-----------~---------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++.++. + ..|...|++.+.+|+.+.|.++++ ++| .|.++++...
T Consensus 404 l~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG-~W~~HCHi~~ 467 (534)
T 1zpu_A 404 IQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPG-VWFFHCHIEW 467 (534)
T ss_dssp EEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCE-EEEEEECCHH
T ss_pred EeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCe-eEEEEeCchh
Confidence 998753 1 246788999999999999999988 678 8999998754
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-10 Score=125.50 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=156.3
Q ss_pred EEEEEEEEEEEecCCCe--------------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCC
Q 007633 32 VFYDWTISYVTASPLGD--------------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRK 95 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~--------------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~ 95 (595)
.++.|.++......+|. .-..+++||+. .|.+.+ +|+++++|+.|... ..+.+++ +|....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~- 227 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLY- 227 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEE-
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEE-
Confidence 36677777665544442 23578999995 588876 67899999999865 5677887 675432
Q ss_pred CCCCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhh------cCceeeEEEecc---CCCCCCC--
Q 007633 96 NSWQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA------AGGYGGIIINNR---DVIPLPF-- 158 (595)
Q Consensus 96 ~~~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 158 (595)
--..||.+ . ....|.|||+++..++++ +.++|+.-+....... ..-.-.+.|.+. +....|.
T Consensus 228 vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 228 VIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 24679853 2 456799999999999995 5777777554221110 000012223321 1111111
Q ss_pred ---C---C----CCCceeEeeec-cccccHHHHHHHH----hCCCC---------CC------------CCCeEEEcCCC
Q 007633 159 ---A---V----PDGDITIFISD-WYTKSHKKLRKDV----ENGVD---------LG------------VPDGILINGLG 202 (595)
Q Consensus 159 ---~---~----~d~e~~l~l~d-~~~~~~~~l~~~~----~~g~~---------~~------------~~d~~liNG~~ 202 (595)
+ . ..+++.+.+.. +.......+.+.. ..+.. .+ ....++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 0 0 11233343321 0000000000000 00000 00 01247999999
Q ss_pred CCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee---eeeeEEEEeccceEEEE
Q 007633 203 PYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ---QNYTNMDIHVGQSFSFL 279 (595)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p---~~~d~l~i~pGqR~dvl 279 (595)
+.. +.+.++++.|+++||+|+|.+....|.||||||.|+|++.||....+ ...|++.|. |+++.|+
T Consensus 387 ~~~----------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 387 FDM----------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp CCT----------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred CCC----------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 721 23668999999999999999865689999999999999999987653 468999999 9999999
Q ss_pred EEeCCC---CCcceEEEEeec
Q 007633 280 VTTDQN---ASSDYYIVASPR 297 (595)
Q Consensus 280 v~~~~~---~g~~y~i~a~~~ 297 (595)
+++++. +| .|.++++..
T Consensus 456 ~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 456 VKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp ECBCSCCCGGG-CEEEEESSH
T ss_pred EEeccCCCCCC-CEEEeCCch
Confidence 999753 35 799999764
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-10 Score=128.26 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=139.8
Q ss_pred eEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEEC-CceeeeEEccCcc
Q 007633 63 ILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVK-DQIGSFFYFPSLD 135 (595)
Q Consensus 63 ~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~~ 135 (595)
+|+|++|+++++|+.|... ..+.+|++|.... --..||.+. ....|.|||+++..++++ +.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLL-VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEE-EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEE-EEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999975 4577899887543 245799652 446799999999999994 3489999999854
Q ss_pred hhhhcCce--eeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhC----CC--CC----------------C
Q 007633 136 FQRAAGGY--GGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN----GV--DL----------------G 191 (595)
Q Consensus 136 ~q~~~Gl~--G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~----g~--~~----------------~ 191 (595)
.-...... +.|..........|... .... ..|. +........+.. .. .. .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Cccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 21011122 22222222110111000 0000 0010 000000000000 00 00 0
Q ss_pred CCCeEEEcCCCCCCCCCC----------------CC------------CC-----CCCceeEEEecCcEEEEEEEEeCC-
Q 007633 192 VPDGILINGLGPYRYDAA----------------IV------------PD-----GIPYQLINVEPGKTYRLRVHNVGI- 237 (595)
Q Consensus 192 ~~d~~liNG~~~~~~~~~----------------~~------------~~-----~~~~~~l~v~~G~~~rlRliNag~- 237 (595)
....+.|||+.+..-... .. +. ......+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 012467888754211000 00 00 001245889999999999999875
Q ss_pred ----CceeeEEEeCCceeEEee-cCcc----------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 238 ----STSLNFRIQNHNLLLVET-EGSY----------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 238 ----~~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
...|.||+|||.|+|++. +|.+ .+|...|++.+.+|+.+.|.++++ ++| .|.++++....
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG-~W~~HCHi~~H 512 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPG-VWAFHCHIEPH 512 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCE-EEEEEESSHHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCe-EEEEEeeehhH
Confidence 347999999999999998 4653 357789999999999999999988 578 89999987543
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-10 Score=123.33 Aligned_cols=244 Identities=11% Similarity=0.079 Sum_probs=150.9
Q ss_pred EEEEEEcCCC--------CCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 50 QQVIGINGQF--------PGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 50 ~~~~~~Ng~~--------PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|.... --..||.+. ....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLT-IIEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEE-EEEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 3479999999999999999865 5678999997653 246788752 33569999999
Q ss_pred EEEEEECCceeeeEEccCcc--hh-hhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHH-----------HH
Q 007633 116 TYQFQVKDQIGSFFYFPSLD--FQ-RAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKK-----------LR 181 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~-----------l~ 181 (595)
+..+++++.+|.||-.+... .+ ...|..-+++.........|......+. ..+.+........ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999987632 11 1122222344343221111110000000 0001110000000 00
Q ss_pred HHHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeC--CCceeeEEEeCC
Q 007633 182 KDVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVG--ISTSLNFRIQNH 248 (595)
Q Consensus 182 ~~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag--~~~~~~~~i~gh 248 (595)
..+..... .....+.|||+.+..-... ..........+.++.|++++|.|.|.+ ....|.||+|||
T Consensus 324 ~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00000000 0112578999886321000 000011235789999999999999532 234799999999
Q ss_pred ceeEEeecCcce----eeeeeeEEEEec---cceEEEEEEeCCCCCcceEEEEeecc
Q 007633 249 NLLLVETEGSYT----VQQNYTNMDIHV---GQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 249 ~~~via~DG~~~----~p~~~d~l~i~p---GqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +|| .+.++++...
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG-~W~~HCHi~~ 457 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPG-PWFLHCHIDF 457 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCc-eEEEEeCChh
Confidence 999999887543 588899999986 99999999988 678 8889998754
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.7e-10 Score=123.75 Aligned_cols=229 Identities=12% Similarity=0.023 Sum_probs=150.4
Q ss_pred EEEEEEEEEEEecC-------------CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee--CC---cc
Q 007633 32 VFYDWTISYVTASP-------------LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW--NG---VQ 92 (595)
Q Consensus 32 ~~~~l~~~~~~~~~-------------~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~--HG---~~ 92 (595)
+++.|.++...... .|..-..+++||+. .|+|+|++| ++++|+.|... ..+.+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654433 12233578999995 699999999 99999999975 5678999 77 43
Q ss_pred CCCCCCCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc---C----------ceee--EEEecc
Q 007633 93 HRKNSWQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA---G----------GYGG--IIINNR 151 (595)
Q Consensus 93 ~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~---G----------l~G~--liV~~~ 151 (595)
.. --..||.+ . ....|.|||+++..++++ .|.||..++....... + .... |.+...
T Consensus 216 ~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MR-LIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EE-EEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 22 24678874 2 345689999999999995 4789988774211000 0 1111 222222
Q ss_pred CCCCCCC--C-------CCCCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEE-
Q 007633 152 DVIPLPF--A-------VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLIN- 221 (595)
Q Consensus 152 ~~~~~~~--~-------~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~- 221 (595)
...+.|. . ....+..+.+.. + ...+.|||+.+.. ..+.++
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~---------------~-----~~~~~iNg~~~~~----------~~p~~~~ 342 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL---------------S-----GMQWTINGMFWNA----------SNPLFEH 342 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE---------------E-----TTEEEETTBCCCT----------TCTTCCC
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC---------------C-----CceeeECCCcCCC----------CCCceec
Confidence 1110010 0 000111111110 0 1258999998731 124567
Q ss_pred EecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce------------ee---eeeeEEEEeccceEEEEEEeC---
Q 007633 222 VEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT------------VQ---QNYTNMDIHVGQSFSFLVTTD--- 283 (595)
Q Consensus 222 v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~------------~p---~~~d~l~i~pGqR~dvlv~~~--- 283 (595)
++.|++++|+|.|.+....|.||+|||.|+|++.+|... .| ...|++.+.||+++.+.+++.
T Consensus 343 ~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ 422 (448)
T 3aw5_A 343 VSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKK 422 (448)
T ss_dssp EEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccC
Confidence 899999999999988445899999999999999999764 23 578999999999999997775
Q ss_pred CCCCcceEEEEeec
Q 007633 284 QNASSDYYIVASPR 297 (595)
Q Consensus 284 ~~~g~~y~i~a~~~ 297 (595)
.. . .|.++++..
T Consensus 423 ad-n-pw~~HCHil 434 (448)
T 3aw5_A 423 RG-Q-LFPFHCHNL 434 (448)
T ss_dssp TT-C-EEEEEESSH
T ss_pred CC-C-cEEEEcCCh
Confidence 21 2 377888764
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=9.9e-10 Score=121.15 Aligned_cols=247 Identities=9% Similarity=0.040 Sum_probs=149.5
Q ss_pred EEEEEEcCCCC--------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 50 QQVIGINGQFP--------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 50 ~~~~~~Ng~~P--------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
...++|||+.. -|+|+|++|+++++|+.|... ..+.+|++|..+. --..||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT-VIAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceE-EEecCCcccCceEeCeEEEccEEEE
Confidence 35789999973 379999999999999999975 4678999987543 245788762 44669999999
Q ss_pred EEEEEECCceeeeEEccCc--chhh--hcCce-eeEEEeccCCCCCCCCC----CC----CceeE-eeeccccccH---H
Q 007633 116 TYQFQVKDQIGSFFYFPSL--DFQR--AAGGY-GGIIINNRDVIPLPFAV----PD----GDITI-FISDWYTKSH---K 178 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~--~~q~--~~Gl~-G~liV~~~~~~~~~~~~----~d----~e~~l-~l~d~~~~~~---~ 178 (595)
+..+++++..|.||..... .... ..... .+++.........|... .+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557899988765 2110 01111 22332221111111100 00 00000 0000000000 0
Q ss_pred HHHHHH--hCCCCCCCCCeEEEcCCCCCCCCCCC------CCC---CCCceeEEEecCcEEEEEEEEeCC----CceeeE
Q 007633 179 KLRKDV--ENGVDLGVPDGILINGLGPYRYDAAI------VPD---GIPYQLINVEPGKTYRLRVHNVGI----STSLNF 243 (595)
Q Consensus 179 ~l~~~~--~~g~~~~~~d~~liNG~~~~~~~~~~------~~~---~~~~~~l~v~~G~~~rlRliNag~----~~~~~~ 243 (595)
.....+ ...........+.|||+.+......+ .+. ......+.+..++++++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 00000111246899999863210000 000 011245888888888887887754 568999
Q ss_pred EEeCCceeEEeecC---------c-c-----------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 244 RIQNHNLLLVETEG---------S-Y-----------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 244 ~i~gh~~~via~DG---------~-~-----------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
|+|||.|+|++.++ . + ..|...|++.+.+|+++.|.++++ ++| .|.++++....
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG-~W~~HCHil~H 508 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPG-AWLFHCHIAWH 508 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCE-EEEEEECCHHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCe-eEEEEecchhH
Confidence 99999999999986 2 1 146788999999999999999988 578 89999987543
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.17 E-value=6.4e-11 Score=100.94 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=62.9
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|..+.|++++||+|++ .|..+.++++|+++. +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 5566678999999999654 699888999999863 256654 456799999999888 479999999986
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 33 999999984
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=99.30 Aligned_cols=83 Identities=14% Similarity=0.185 Sum_probs=64.2
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC-----CCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV-----LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-----~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
-+.|++++||+|++ .|....++.+|.|+.... ..+|. ..+...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 37999999999755 588777899998886432 12332 0123468999999999987568999999999
Q ss_pred hhhhcCceeeEEEec
Q 007633 136 FQRAAGGYGGIIINN 150 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~ 150 (595)
.|...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 778889999999963
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-09 Score=120.22 Aligned_cols=250 Identities=14% Similarity=0.034 Sum_probs=148.7
Q ss_pred EEEEEEEEEEecCCCe-----------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCc------cCC
Q 007633 33 FYDWTISYVTASPLGD-----------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGV------QHR 94 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~-----------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~------~~~ 94 (595)
++.|.++......+|. .-..+++||+ +.|.|.|+.| ++++|+.|... ....++++|. +..
T Consensus 173 d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~ 250 (534)
T 3abg_A 173 DIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPF 250 (534)
T ss_dssp SCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCE
T ss_pred eEEEEEeeeeecCCCceeccCCCCccccCceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccE
Confidence 4556666654444332 2357899999 5799999985 99999999975 5568888761 111
Q ss_pred CCCCCCCC----CC--CCCccCCCCeEEEEEEECCcee-eeEEccCcchhhhc-------CceeeEEEeccCCCCCCCCC
Q 007633 95 KNSWQDGV----LG--TNCPIPAGWNWTYQFQVKDQIG-SFFYFPSLDFQRAA-------GGYGGIIINNRDVIPLPFAV 160 (595)
Q Consensus 95 ~~~~~DGv----~~--tq~~I~PG~~~~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~ 160 (595)
.--..||. |. ....|.|||+++..+++++.+| +||........... ...+.+-.........+.
T Consensus 251 ~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~-- 328 (534)
T 3abg_A 251 KVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD-- 328 (534)
T ss_dssp EEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC--
T ss_pred EEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC--
Confidence 22457885 22 4567999999999999864477 58776532100000 011222222111100000
Q ss_pred CCCceeEeeeccc-cccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc
Q 007633 161 PDGDITIFISDWY-TKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST 239 (595)
Q Consensus 161 ~d~e~~l~l~d~~-~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~ 239 (595)
....+..+.... ..........+.-+. ....++|||+.+..- .....++++.|++++|.|.|.+...
T Consensus 329 -~~~~P~~L~~~~~p~~~~~~~~~~~~~~---~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~ 396 (534)
T 3abg_A 329 -TSVVPANLRDVPFPSPTTNTPRQFRFGR---TGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGW 396 (534)
T ss_dssp -CCCCCCCCCCCSCCCCCCCCCEEEECSC---CCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSC
T ss_pred -CCCCccccccCCCCCCccccceEEEEec---cCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCC
Confidence 000000000000 000000000000000 112468999987210 0112467999999999999988656
Q ss_pred eeeEEEeCCceeEEee-cCc---ceee---eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 240 SLNFRIQNHNLLLVET-EGS---YTVQ---QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 240 ~~~~~i~gh~~~via~-DG~---~~~p---~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
.|.||||||.|+|++. +|. ...+ ...|++.+.||+++.|.+.+.+.+| .|.++++....
T Consensus 397 ~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCHil~H 462 (534)
T 3abg_A 397 THPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCHNLIH 462 (534)
T ss_dssp CCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEESCHHH
T ss_pred CcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecChHHH
Confidence 8999999999999998 663 1112 4589999999999999998444788 99999987543
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.10 E-value=6.5e-10 Score=121.47 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=139.5
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCc-cCCCCCCCCCCC----C--CCCccCCCCeEEEEEEE
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGV-QHRKNSWQDGVL----G--TNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~-~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 121 (595)
-..++|||+. .|.|.|+.| ++++|+.|... ..+.+|++|. .+ .--..||.+ . ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~-~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDF-IQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCE-EEEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeE-EEEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999995 699999885 99999999976 4578998876 33 224679943 2 33669999999999999
Q ss_pred CCceeeeEE-ccCcc--hhhhcCceeeE-EEeccC--CC----CCCCCCCC----------CceeEeeeccccccHHHHH
Q 007633 122 KDQIGSFFY-FPSLD--FQRAAGGYGGI-IINNRD--VI----PLPFAVPD----------GDITIFISDWYTKSHKKLR 181 (595)
Q Consensus 122 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~l-iV~~~~--~~----~~~~~~~d----------~e~~l~l~d~~~~~~~~l~ 181 (595)
++.+|.++. .+-.. .....+...++ ...... .. ..|..... .+..+.+..
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~---------- 376 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG---------- 376 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE----------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe----------
Confidence 644676332 11110 00000111222 222111 00 01100000 001111110
Q ss_pred HHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCc---
Q 007633 182 KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGS--- 258 (595)
Q Consensus 182 ~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~--- 258 (595)
.........++|||+.+. +...+.++.|++++|+|.|.+.. .|.||||||.|+|++.++.
T Consensus 377 -----~~~~~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 377 -----TQDEYGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp -----EECTTSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred -----ecCCCCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000001125689999862 22457899999999999998764 8999999999999998751
Q ss_pred ------------c-e-----eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 259 ------------Y-T-----VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 259 ------------~-~-----~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
. . ++...|++.|.||+++.|.+++++.+| .|.++++...
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 0 0 234789999999999999999976788 9999998754
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.01 E-value=5.3e-10 Score=100.30 Aligned_cols=94 Identities=11% Similarity=0.015 Sum_probs=71.0
Q ss_pred EEecCCCcEEEEEEEcCCCc-cceeeecCceEEEE------EEeCCccCCCCCCCCCC--CCCCcccEEEeCCCcEEEEE
Q 007633 434 LINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVV------GMDFGVWTENSRGTYNK--WDGVARSTTQVFPGAWTAIL 504 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl------~~g~G~~~~~~~~~~n~--~~p~~rDTv~v~p~g~~~ir 504 (595)
.+.++.|+.|.|+|.|.+.. .|.||+|+..+.+. ++..|..+ .+.. ....++|+..|.|+....+.
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~-----~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAA-----NYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGG-----TTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccc-----cccCcccccccccccccCCCCEEEEE
Confidence 46789999999999999888 89999998653110 00001000 0111 12346789999999999999
Q ss_pred EEecCcceeEEeeccccceeccceEEEEE
Q 007633 505 VYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 505 f~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
|.+++||.|.||||+..|+. ||+..+.|
T Consensus 111 f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 111 FTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999 99999887
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6.9e-10 Score=94.32 Aligned_cols=85 Identities=14% Similarity=0.004 Sum_probs=65.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-cCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL-DNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a-dNPG 511 (595)
..+.++.|+.|.| .|.+...|++|+||..|... .|... +....++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~~----------~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKELA----------DKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHHH----------HHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccccc----------ccccccccccCCCCeEEEEEecCCCCe
Confidence 4578899999876 48877889999999876320 01000 0112577899999999999998 7999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|||| .|..+||...+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 58999999999885
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.9e-09 Score=95.48 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=67.6
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCC-CceeeeCCccC-----------------CCCCCCCCC-CCCCCccCCCCeEEEE
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDE-PLLLTWNGVQH-----------------RKNSWQDGV-LGTNCPIPAGWNWTYQ 118 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~-~~~iH~HG~~~-----------------~~~~~~DGv-~~tq~~I~PG~~~~Y~ 118 (595)
+|--+.|+|++||+|+++++|.-.. ++.++.|+... ...+..+.. ......|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4445799999999999999999777 88888887421 000000000 0112348999999999
Q ss_pred EEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 119 FQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 119 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
|++ +++|+|+||||...|.. ||.|.|+|.
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 58999999999988888 999999984
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-07 Score=104.20 Aligned_cols=241 Identities=10% Similarity=0.034 Sum_probs=146.2
Q ss_pred EEEEEcCCCC----------------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCc
Q 007633 51 QVIGINGQFP----------------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCP 108 (595)
Q Consensus 51 ~~~~~Ng~~P----------------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~ 108 (595)
..++|||+-. -++|+|++|+++++|+.|... ....+|.+|..+.- -..||.+. ....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 4688999742 379999999999999999975 45689999876532 45789762 3456
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcch-----hhhcCceeeEEEeccCCCCCCCCCCCCcee-Eeeec--cccccHH--
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLDF-----QRAAGGYGGIIINNRDVIPLPFAVPDGDIT-IFISD--WYTKSHK-- 178 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~-l~l~d--~~~~~~~-- 178 (595)
|.|||+++..+++++..|.||-...... +.. +..-+++..+......|-... .+.. ..+.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 9999999999999756899999987532 111 112233333322111111100 0000 00000 0000000
Q ss_pred HHH------HHHhCCCCCCCCCeEEEcCCCCCCCCCCC------CCCC---CCceeEEEe----cCcEEEEEEEEeCC-C
Q 007633 179 KLR------KDVENGVDLGVPDGILINGLGPYRYDAAI------VPDG---IPYQLINVE----PGKTYRLRVHNVGI-S 238 (595)
Q Consensus 179 ~l~------~~~~~g~~~~~~d~~liNG~~~~~~~~~~------~~~~---~~~~~l~v~----~G~~~rlRliNag~-~ 238 (595)
... ..+..+ ......+.|||..+..-...+ .+.. .....+.+. .|+++.|.|-|.+. .
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 000 000000 001124678998753110100 0100 011234443 59999999999872 2
Q ss_pred ceeeEEEeCCceeEEeec-Cc-----------ceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 239 TSLNFRIQNHNLLLVETE-GS-----------YTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 239 ~~~~~~i~gh~~~via~D-G~-----------~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
..|+||+|||.|+|++.+ |. +..|...|++.+.+|+...+.++++ +|| .+.++++...
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG-~W~~HCHi~~ 530 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPG-SWLLHCHIAW 530 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCE-EEEEEECSHH
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCe-eeEEEECcHH
Confidence 489999999999999983 32 2357889999999999999999998 678 8889998754
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-08 Score=91.11 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=67.7
Q ss_pred CCCCCeEEeecCCEEEEEEEE--CCCCCceeeeCCcc------------C----CCCCCCCCCC--CCCCccCCCCeEEE
Q 007633 58 QFPGPILNVTTNWNVVVNVKN--DLDEPLLLTWNGVQ------------H----RKNSWQDGVL--GTNCPIPAGWNWTY 117 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N--~l~~~~~iH~HG~~------------~----~~~~~~DGv~--~tq~~I~PG~~~~Y 117 (595)
+|--+.|+|++||+|+++++| ..+..+.++.+... . ..-+..|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344479999999999999999 66778887776310 0 0000001111 11245899999999
Q ss_pred EEEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 118 QFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 118 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.|++ +.+|+|||||+...|...||.|.|+|.|
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 5899999999998888899999999974
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=85.67 Aligned_cols=79 Identities=13% Similarity=0.195 Sum_probs=64.8
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
|..|--..|++++||+|++.++|....++.+...+... ...+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECc--
Confidence 55554468999999999999999987777777665532 1357899999999998 68999999997
Q ss_pred hhhhcCceeeEEEe
Q 007633 136 FQRAAGGYGGIIIN 149 (595)
Q Consensus 136 ~q~~~Gl~G~liV~ 149 (595)
.|...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46678999999995
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=5.5e-09 Score=87.53 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=59.2
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-----CCCCccCCCCeEEEEEEECCceeeeEEccCcch
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-----GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF 136 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 136 (595)
+.|++++||+|+ ++|..+.++++|+|+.... +|.. .....+.||+++++.|. ++|+|+|||+ .
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~ 85 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--P 85 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--G
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--C
Confidence 689999999875 5898778999999986321 2211 01245899999999873 6999999999 6
Q ss_pred hhhcCceeeEEEe
Q 007633 137 QRAAGGYGGIIIN 149 (595)
Q Consensus 137 q~~~Gl~G~liV~ 149 (595)
|...||.|.|+|.
T Consensus 86 H~~~gM~G~i~V~ 98 (98)
T 2plt_A 86 HQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGTCEEEEEEC
T ss_pred ccccCCeEEEEEC
Confidence 7778999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.73 E-value=5.5e-09 Score=87.57 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=58.4
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|++ .|....++.+|.++....+. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 36899999998765 58766789999887532100 0000001124589999999988 47999999999 67778
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.3e-07 Score=105.60 Aligned_cols=92 Identities=5% Similarity=-0.084 Sum_probs=74.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-------------
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT------------- 260 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~------------- 260 (595)
..+.+||+.+. +...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~-----------~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTFN-----------DGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECSTT-----------SCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccCC-----------CCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 45778888762 34678999999999999998875 899999999999998765321
Q ss_pred --------------eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 261 --------------VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 261 --------------~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++...|++.+.+|+.+.|.+++.+++| .|.++++...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999766788 8999998754
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.70 E-value=3.5e-08 Score=87.42 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=57.0
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|=-+.|++++||+|++ .|..+.++++++.... +|... ....+.||++++|.| +++|+|+|||..
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455457999999999865 5887777777765421 22222 234589999999888 479999999976
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 33 999999984
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2.9e-08 Score=81.77 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=56.8
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|++ .|..+.+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .|...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 46899999999765 5876778899888731 010 0124589999998887 57999999999 56667
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.68 E-value=2.5e-08 Score=84.75 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=62.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-cCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL-DNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a-dNPG 511 (595)
..+.++.|+.|.|+ |.+...|++|+|+..+.. ..|... .....|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~~~----------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSADLA----------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHHHH----------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---cccccc----------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 45688999999886 777778999998764410 001000 0011356678899999898887 7999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|||| .|..+||...+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 69999999999885
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.66 E-value=5.8e-08 Score=81.88 Aligned_cols=79 Identities=6% Similarity=0.024 Sum_probs=56.9
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCC--------CCCCCCCCCccCCCCeEEEEEEECCceeeeEEcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSW--------QDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFP 132 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~ 132 (595)
-+.|++++||+|+ +.|....+++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 3789999999976 5688667788777631 0000 011111224589999999988 5799999999
Q ss_pred CcchhhhcCceeeEEEe
Q 007633 133 SLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 133 H~~~q~~~Gl~G~liV~ 149 (595)
+ .|..+||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77888999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.61 E-value=9.6e-08 Score=83.21 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=54.3
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
..|+|++||+|++.++|. ++++..+.- .+.+|.. ...+.||++++|.| +++|+|||||. .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 699999999988777762 344433321 1223431 23457999998888 57999999999 677789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.7e-07 Score=78.51 Aligned_cols=76 Identities=16% Similarity=0.249 Sum_probs=58.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-------CCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-------GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+.|++++||+| +++|....++++|.++... .+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 58999999985 5588877788888887432 22321 11235799999998873 7999999999
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.|...||.|.|+|.
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67778999999984
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1e-07 Score=79.61 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=56.8
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC---CCCCccCCCCeEEEEEEECCceeeeEEccCcchhh
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL---GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR 138 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 138 (595)
+.|++++||+| ++.|....++.++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999996 5568766678877776532 12211 1124589999999988 57999999999 677
Q ss_pred hcCceeeEEEe
Q 007633 139 AAGGYGGIIIN 149 (595)
Q Consensus 139 ~~Gl~G~liV~ 149 (595)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=78.38 Aligned_cols=76 Identities=17% Similarity=0.277 Sum_probs=57.2
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-------CCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-------GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+.|++++||+|+ ++|....+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEE---CCCceEEEEcC-
Confidence 689999999865 588877788888776422 12221 1123579999999887 37999999999
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.|..+||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-07 Score=83.55 Aligned_cols=76 Identities=12% Similarity=0.098 Sum_probs=53.7
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|.+.++|. ++++..+.- .+.||. ....+.||++++|.| +.+|+|||||. .|...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 799999999977666553 444333211 112332 123457999988888 57999999998 467789
Q ss_pred ceeeEEEeccC
Q 007633 142 GYGGIIINNRD 152 (595)
Q Consensus 142 l~G~liV~~~~ 152 (595)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=2.2e-07 Score=80.84 Aligned_cols=75 Identities=9% Similarity=-0.001 Sum_probs=54.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|+. .|.. .++++..+.. .+.+|. ....+.||++++|.| +.+|+|+|||. .|...|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~-----~~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVRE-----VWPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTT-----TSCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCC-----cCCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcCC
Confidence 6999999999754 4553 5665555422 112332 123467999999888 47999999996 677789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.48 E-value=3.5e-07 Score=81.85 Aligned_cols=99 Identities=8% Similarity=0.010 Sum_probs=69.8
Q ss_pred EEecCCCcEEEEEEEc--CCCccceeeecCc--eEEEEEEeCCccCCCCCCCCC---CCCCCcccEEEeCCCcEEEEEEE
Q 007633 434 LINGTYKGFMEIIFQN--NDTTVQSYHMDGY--AFFVVGMDFGVWTENSRGTYN---KWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N--~~~~~HP~HlHG~--~F~Vl~~g~G~~~~~~~~~~n---~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
.++++.|+.|.|++.| .+...|.||++.. +|.-+. ..|.+...+ ..|- -....+++|..|.||....+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAV-NTAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHH-HHHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhh-hhhhhhccc-ccccCccccccccccceeeCCCceeEEEEE
Confidence 4678999999999999 6678899999842 221000 000000000 0000 01134578889999999999999
Q ss_pred ecCcceeEEeeccccceeccceEEEEEe
Q 007633 507 LDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 507 adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
++.||.|.|||++..|...||...+.|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999998885
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.47 E-value=5.1e-07 Score=75.39 Aligned_cols=79 Identities=13% Similarity=0.010 Sum_probs=58.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+..+- |.-. .....|+..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p------g~~~----------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP------ADTA----------AKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC------HHHH----------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC------cccc----------ccccccccccCCCCEEEEEc--CCCeE
Confidence 45788999999886 77677899999874321 0000 00114678899998887766 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 79 y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 4888999999887
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=5.6e-07 Score=75.11 Aligned_cols=80 Identities=18% Similarity=0.120 Sum_probs=59.6
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.+|+|+..+ +. ..+. ...++|+..+.||....++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~-----------p~---~~~~-~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI-----------PS---GVNA-DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS-----------CT---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC-----------CC---cccc-ccccccceecCCCCEEEEEe--CCCeE
Confidence 4578899999987 67777789999987532 00 0000 01236788999999887755 68999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 4888999998887
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.40 E-value=9.1e-07 Score=72.63 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=56.5
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+.. +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 45688999999875 766678999998720 0114667888998777765 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 72 y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCccCCCEEEEEE
Confidence 999999 5888899998887
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-06 Score=75.16 Aligned_cols=73 Identities=12% Similarity=0.184 Sum_probs=57.6
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|.+.|.+...|.|++.... -+..+.||....+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~---------------------------~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFG---------------------------VQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCCC---------------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence 467899999999999998766666554321 14578999999999999999999
Q ss_pred EEeeccccceeccceEEEEEe
Q 007633 514 NLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~ 534 (595)
.||||+..|... |...+.|.
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEE
T ss_pred EEECCCCCchHH-CEEEEEEe
Confidence 999999655333 88888875
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.37 E-value=4.7e-07 Score=75.67 Aligned_cols=77 Identities=13% Similarity=0.089 Sum_probs=55.7
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
-+.|++++||+|++ .|....++++....-. +.+|... ....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 46999999999655 5876677777765421 1223210 113578999999888 479999999985
Q ss_pred hhhhcCceeeEEEe
Q 007633 136 FQRAAGGYGGIIIN 149 (595)
Q Consensus 136 ~q~~~Gl~G~liV~ 149 (595)
|..+||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6667999999984
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.5e-06 Score=75.70 Aligned_cols=76 Identities=12% Similarity=0.018 Sum_probs=51.5
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|+|++||+|+. .|.-. ++++..+ .....||.. .....||++++|.| +.+|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccC
Confidence 36999999999754 55532 4444332 111223321 12346899888887 47999999997 47778
Q ss_pred CceeeEEEecc
Q 007633 141 GGYGGIIINNR 151 (595)
Q Consensus 141 Gl~G~liV~~~ 151 (595)
||.|.|+|.+.
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.30 E-value=2e-06 Score=72.07 Aligned_cols=71 Identities=18% Similarity=0.190 Sum_probs=59.8
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|++.|.+...|.|.+.+..+. ..+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~---------------------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGID---------------------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTEE---------------------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCcc---------------------------eeecCCcceeEEEecccCceE
Confidence 56889999999999999888888877654431 356788899999999999999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|.. |...||...+.|
T Consensus 82 ~y~C~~--H~~~gM~G~i~V 99 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIV 99 (100)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEECcc--ccCCCCEEEEEE
Confidence 999986 888999988877
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.6e-06 Score=75.48 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=51.6
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|+ +.|.-. ++++..+ .....||.. ...+.||++++|.| +.+|+|+|+|. .|...|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECS--TTTTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CccccC
Confidence 699999999965 555532 4443332 111223321 13457999988887 47999999997 477789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=8.5e-07 Score=73.86 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=56.6
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++++..+. .+. .....++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~~------------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ESA------------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SCH------------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----ccc------------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998876 77667899998865440 000 00113556778888777765 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||+ .|..+||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 5999999998887
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2.3e-06 Score=75.12 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=61.8
Q ss_pred CCCCCeEEeecC-CEEEEEEEECCCCC-----ce--eeeCCccC-------CCC------CCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNVTTN-WNVVVNVKNDLDEP-----LL--LTWNGVQH-------RKN------SWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v~~G-d~v~v~v~N~l~~~-----~~--iH~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.|++| |+|.|+|+|....+ +. |--+|..+ ... +..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 99999999986543 33 22222110 000 00111111 12358999999
Q ss_pred EEEEEEC--CceeeeEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
++.|+++ .++|+|||+|....|+. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999999877877 8999999963
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.22 E-value=3.3e-06 Score=70.51 Aligned_cols=82 Identities=13% Similarity=0.033 Sum_probs=58.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.+|+++..|- .| ++. ... ...+|++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 4578899999877 677777899999975431 01 000 000 0124566788898877765 69999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 4888999998887
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.9e-06 Score=76.67 Aligned_cols=97 Identities=13% Similarity=0.050 Sum_probs=63.8
Q ss_pred EEEcC--CCCCCeEEe-ecCCEEEEEEEECCCCC-----cee--eeCCccC-------C-C----CCCCCCCCC-CCCcc
Q 007633 53 IGING--QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLL--TWNGVQH-------R-K----NSWQDGVLG-TNCPI 109 (595)
Q Consensus 53 ~~~Ng--~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~i--H~HG~~~-------~-~----~~~~DGv~~-tq~~I 109 (595)
+..++ +|=-..|.| +.||+|+|+|+|....+ +.+ --+|... . + -+..|.-.. ....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 44454 453358999 99999999999997653 332 2222100 0 0 000111001 12358
Q ss_pred CCCCeEEEEEEEC-CceeeeEEccCcchhhhcCceeeEEEec
Q 007633 110 PAGWNWTYQFQVK-DQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 110 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.||+++++.|+++ -++|+|||+|....|.. ||.|.|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999984 16999999999877877 8999999963
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.3e-05 Score=66.30 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=53.8
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|=-+.|+|++||+|++ .|....+++++..... .|... ....+.||+++++.| +++|+|+|+|..
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3344346999999999765 5876656655544321 11111 123578999999888 479999999976
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 33 999999984
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.02 E-value=5e-06 Score=69.81 Aligned_cols=85 Identities=12% Similarity=-0.072 Sum_probs=56.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.++++.-... .+.+...+ .......+++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----hcccccccceecCCCCEEEEEe--CCCeE
Confidence 45788999999876 77777899998721100 00000000 0001123566788888877766 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 83 y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCcccCCeEEEEE
Confidence 999999 5999999998887
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.99 E-value=2.5e-05 Score=83.62 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=65.8
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECC---CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDL---DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
..+...+-.|--+.|+|++||+|++.++|.. +..+++...+.. + ...+.||++.++.|++ +++|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG---------I---K~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG---------V---SMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------E---EEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCC---------c---eeeeCCCCeEEEEEEc-CCCE
Confidence 4455566677778999999999999999973 344444433321 1 1357899999999999 6899
Q ss_pred eeEEccCcc-hhhhcCceeeEEEecc
Q 007633 127 SFFYFPSLD-FQRAAGGYGGIIINNR 151 (595)
Q Consensus 127 t~wYH~H~~-~q~~~Gl~G~liV~~~ 151 (595)
+|||||+.- .....+|.|.|+|+|+
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 999999842 2222479999999873
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.97 E-value=2.6e-05 Score=68.32 Aligned_cols=92 Identities=16% Similarity=0.074 Sum_probs=59.7
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceee--eCCccC-------CCC------CCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLT--WNGVQH-------RKN------SWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH--~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.| ++||+|.|+++|....+ +.+- -+|..+ ... +..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 99999999999997553 3322 222100 000 00111101 12358999999
Q ss_pred EEEEEEC-Cceee-eEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVK-DQIGS-FFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
+..|+++ -.+|+ |||+|....|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999984 04655 999999887877 8999999963
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.91 E-value=3.5e-05 Score=67.37 Aligned_cols=91 Identities=14% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceeee--CCccC-------CCCCCCCCCC------C-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLTW--NGVQH-------RKNSWQDGVL------G-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~------~-tq~~I~PG~~~ 115 (595)
+|=-..|.| ++||+|+|+++|....+ +.+-. .|..+ .....+|=++ . ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443358999 99999999999996553 43322 22110 0000111111 1 11248999999
Q ss_pred EEEEEECC-ceee-eEEccCcchhhhcCceeeEEEe
Q 007633 116 TYQFQVKD-QIGS-FFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 116 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
++.|.++. .+|+ |||+|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999840 4776 999999888887 899999984
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.8e-05 Score=67.12 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=60.4
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceeeeC--C---------cc----CCCCCCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLTWN--G---------VQ----HRKNSWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH~H--G---------~~----~~~~~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.| +.|++|+|+++|....+ +.+-+- + +. ...-+..|.--. ....|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 443458999 99999999999997553 433221 1 00 000000111101 12347999999
Q ss_pred EEEEEECC-ceee-eEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVKD-QIGS-FFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
++.|.++. ++|+ |+|+|....|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 5885 999999888877 9999999963
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.90 E-value=2.4e-05 Score=67.96 Aligned_cols=73 Identities=12% Similarity=-0.003 Sum_probs=49.3
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|.+ .|... .++++... ....+|. ....+.||++++|.| +++|+|+|+|.. |..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~--H~~-- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HPF-- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETT--EEE--
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCC--Ccc--
Confidence 6999999998655 56533 44444332 1112232 123457999998888 479999999986 332
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=97.89 E-value=3.1e-05 Score=64.48 Aligned_cols=82 Identities=13% Similarity=0.023 Sum_probs=57.2
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.++++...+- .| .+ ..+. ...++.+.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4678899998877 677777899999875320 00 00 0000 0123445678888777755 69999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 4888999998887
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.77 E-value=6.5e-05 Score=82.07 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred eEEecCCCcEEEEEEEcCCC---ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 433 SLINGTYKGFMEIIFQNNDT---TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~---~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
+.+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||....+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45788999999999999743 3799998876432 36788999999999999
Q ss_pred cceeEEeecccc-ceeccceEEEEEecCC
Q 007633 510 AGIWNLRAENLD-TWYLGQEVYVNVINPE 537 (595)
Q Consensus 510 PG~W~~HCHil~-H~~~GM~~~~~V~~~~ 537 (595)
||.|.||||..- ..|.||...+.|.+++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999321 1235999999988653
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.71 E-value=6.3e-05 Score=63.44 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=49.4
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+|+|... .|. ..++ .-.+.||....+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~~~~--------~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------AALK--------GPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCEE--------CCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------cccc--------ccccCCCCEEEEEe--CCCEEE
Confidence 5678899999885 777778999988521 111 0011 11366777665554 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 43 89888876
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00022 Score=64.50 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=59.1
Q ss_pred eEEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEE-------EeCCCc--EEE
Q 007633 433 SLINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTT-------QVFPGA--WTA 502 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv-------~v~p~g--~~~ 502 (595)
+.+.++.|+.|.+.+.|.+ ...|-+-++.. +. .+.. . |...+.+ .|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhc-----c----ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 45566655421 10 0100 0 0011211 567888 889
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEE
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
+.|.+ .||.+.||||+--|..+||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999989999999998876
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0013 Score=56.56 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=56.1
Q ss_pred CCCCCeEEeec-CCEEEEEEEECCCCC-----ce--ee---------eCCccCC-CCCC---CCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNVTT-NWNVVVNVKNDLDEP-----LL--LT---------WNGVQHR-KNSW---QDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v~~-Gd~v~v~v~N~l~~~-----~~--iH---------~HG~~~~-~~~~---~DGv~~-tq~~I~PG~~~ 115 (595)
+|--..|.|+. |++|+|+|+|....+ +. |- --|+..- ...+ .|.--. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 44456999986 999999999997543 32 21 1122110 0011 121111 12338999999
Q ss_pred EEEEEEC--CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 116 TYQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 116 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
+..|+++ .++|+|.|.|. .|. ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999985 26999999999 666 999999983
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0025 Score=52.69 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=54.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+.++... + +. .++. .....+...+.||....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~-p~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------V-PA---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------S-CT---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------C-cc---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 46788999999886 666667877665411 1 00 0000 00113446788888777765 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|+|-+ |..+||...+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999997 888899988877
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0045 Score=54.44 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=54.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc---chhh
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL---DFQR 138 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~ 138 (595)
..|.++.|++|++.++|. +..+++..-.+ |. +.-+.||+.-++.|++ +++|+|+|+|.. ..|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~---------~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------NI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEEEEETTS---------SC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-CccceEEecCC---------Cc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 44444332222 11 1346899988999998 689999999964 234
Q ss_pred hcCceeeEEEec
Q 007633 139 AAGGYGGIIINN 150 (595)
Q Consensus 139 ~~Gl~G~liV~~ 150 (595)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999999864
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0009 Score=58.28 Aligned_cols=75 Identities=11% Similarity=0.008 Sum_probs=49.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|++.|. .|.+..+.. .+ |..... +.+.||.... ++++.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~~~-----------f~s~pGet~s--~TF~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGAET-----------WKGKINEEIT--VTLSKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTCCC-----------CBCCTTCCCE--EECCSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCccc-----------eecCCCCEEE--EEeCCCeE
Confidence 357889999999987763 455554321 01 111001 1224666544 44589999
Q ss_pred eEEeeccccceeccceEEEEEecC
Q 007633 513 WNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
|.|||-. |..+||-..+.|.++
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEeCC--CCcCCcEEEEEECcC
Confidence 9999995 899999999999865
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0012 Score=57.22 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=50.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+..+ ..|.+..+.. .+. .. .+.+.+.+|....+. ++.||.
T Consensus 22 ~~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p-~g-----------~~~~~~~pg~t~s~T--F~~~G~ 74 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD---KSHNAESVRE----------VWP-EG-----------VAPVKGGFSKEVVFN--AEKEGL 74 (124)
T ss_dssp SEEEECTTCEEEEECSS---SSCCCEECTT----------TSC-TT-----------SCCCBCCTTCCEEEE--CCSSEE
T ss_pred CEEEECCCCEEEEEECC---CCccEEEeCC----------cCC-CC-----------ccccccCCCCEEEEE--eCCCeE
Confidence 35788999999988554 4676665421 111 10 111233466655554 489999
Q ss_pred eEEeeccccceeccceEEEEEecCC
Q 007633 513 WNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
|.|||-. |..+||-..+.|.+|.
T Consensus 75 y~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 75 YVLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEEcCC--CCcCCCEEEEEECCCC
Confidence 9999974 9999999999998764
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0026 Score=53.45 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=48.1
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++.... .|. ..+ ++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~------~~~--------~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------DAF--------RGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc------ccc--------cccccCCCCEEEEEe--CCCEEE
Confidence 5678999999887 777767877665421 000 001 112456777666655 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 54 99888876
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0034 Score=55.02 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=48.9
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++.... .|. ..+ ++-.+.||....+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~------~~~--------~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------DAF--------RGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc------ccc--------cccccCCCCEEEEEc--CCCEEE
Confidence 5678999999886 777777888775321 000 001 122456777766665 799999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||-+ |. ||...+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999988 54 99988877
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.003 Score=54.58 Aligned_cols=74 Identities=7% Similarity=0.113 Sum_probs=50.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|++.|. .|.+..+.. .+ +... +.+.+.|+....+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~ 73 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGL 73 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 357889999999998873 355554321 11 1110 011234676555555 89999
Q ss_pred eEEeeccccceeccceEEEEEec
Q 007633 513 WNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
|.|+|-. |..+||-..+.|.+
T Consensus 74 y~y~C~~--H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 74 YGVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECGG--GTTTTCEEEEEESS
T ss_pred EEEEeCC--CCcCCcEEEEEECC
Confidence 9999995 99999999999986
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.51 E-value=0.014 Score=53.03 Aligned_cols=81 Identities=12% Similarity=0.123 Sum_probs=59.0
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL- 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~- 134 (595)
+-+|--..|.++.|++|++.++|. +..+++..-++.. +.-+.||+..++.|++ +++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSSC------------EEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCCe------------EEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 333333589999999999999997 5555544333211 2346799999999998 689999999983
Q ss_pred chhhhcCceeeEEEec
Q 007633 135 DFQRAAGGYGGIIINN 150 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~~ 150 (595)
-.....+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 3344458999999973
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=62.37 Aligned_cols=76 Identities=9% Similarity=-0.004 Sum_probs=61.0
Q ss_pred eeEEecCCCcEEEEEEEcCC---CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec
Q 007633 432 TSLINGTYKGFMEIIFQNND---TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD 508 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad 508 (595)
...+.++.|+.|.|++.|.+ +..|.|.+.+.... +.+.||....+.|.++
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcC
Confidence 34678899999999999974 56788877664431 2678899999999999
Q ss_pred CcceeEEeeccccce-eccceEEEEEe
Q 007633 509 NAGIWNLRAENLDTW-YLGQEVYVNVI 534 (595)
Q Consensus 509 NPG~W~~HCHil~H~-~~GM~~~~~V~ 534 (595)
.||+|.+||...-|. |.+|...+.|.
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEe
Confidence 999999999975554 67888888775
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.036 Score=47.79 Aligned_cols=74 Identities=7% Similarity=0.077 Sum_probs=47.4
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+..+. .|.+.++- +.. +.....+ .+.||... .+.++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~~-----------~~~pG~t~--~~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEKF-----------KSKINENY--VLTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCCC-----------BCCTTCCE--EEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccce-----------ecCCCCEE--EEEeCCCEEE
Confidence 56789999998876653 35555431 110 1110011 12466644 4455899999
Q ss_pred EEeeccccceeccceEEEEEecC
Q 007633 514 NLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
.|+|-. |..+||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999985 888899999999763
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.054 Score=47.43 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=51.7
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+.|.|++.|.+ ..|.|-+=. ++ --+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf~ip~--------------------~~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGFHVEG--------------------TN-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETT--------------------SS-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceEEecC--------------------CC-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 46889999999999974 455543211 11 114567888888999999999999
Q ss_pred Eeecccc-ceeccceEEEEEe
Q 007633 515 LRAENLD-TWYLGQEVYVNVI 534 (595)
Q Consensus 515 ~HCHil~-H~~~GM~~~~~V~ 534 (595)
++|...- .-|.+|-..++|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997522 2346888888876
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.017 Score=49.84 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=46.9
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+..+. .|.+.++. +.+ +.... .+.+.||.... +.++.||.|
T Consensus 22 ~i~V~~GdtV~f~n~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDK---GHNVETIK----------GMA-PDGAD-----------YVKTTVGQEAV--VKFDKEGVY 74 (123)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECT----------TSS-CTTCC-----------CCBCCTTSCEE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CcEEEEec----------ccC-CCCcc-----------ceecCCCCEEE--EEeCCCeEE
Confidence 56788999988865542 45554431 111 11000 11234666544 445899999
Q ss_pred EEeeccccceeccceEEEEEecC
Q 007633 514 NLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
.|+|-. |..+||...+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 75 GFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECST--TTTTTCEEEEEESSC
T ss_pred EEEeCC--ccccCCEEEEEEcCC
Confidence 999985 888899999999753
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=94.45 E-value=0.081 Score=48.01 Aligned_cols=91 Identities=11% Similarity=0.002 Sum_probs=59.6
Q ss_pred EEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC-------CCCCC-CCCC-CCcccEEEeCCC
Q 007633 434 LING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN-------SRGTY-NKWD-GVARSTTQVFPG 498 (595)
Q Consensus 434 v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~-------~~~~~-n~~~-p~~rDTv~v~p~ 498 (595)
.+++ +.|+.|.|+|.|.+... |-|-|- ..+ .++.. ....| ...+ .....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~-------~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVIA-------KAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEE-------EGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEec-------cCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4678 89999999999997652 554332 111 10000 00001 0011 122345568899
Q ss_pred cEEEEEEEec--CcceeEEeeccccceeccceEEEEEe
Q 007633 499 AWTAILVYLD--NAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 499 g~~~irf~ad--NPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
....|.|.++ .||.|-|+|-+--|+. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999887877 898888875
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=94.22 E-value=0.08 Score=45.46 Aligned_cols=72 Identities=8% Similarity=0.067 Sum_probs=45.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+.. +. .|.++++. +.+. .....+ .+.+|....+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p-~~~~~~-----------~~~~g~t~~~tF--~~~G~ 73 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIP-DGAEAF-----------KSKINENYKVTF--TAPGV 73 (122)
T ss_dssp SEEEECTTEEEEEEES--SS-SCCCEECT----------TCSC-TTCCCC-----------BCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEEC--CC-CcEEEEcc----------cccC-CCccee-----------ecCCCCEEEEEe--CCCEE
Confidence 3567889999988744 33 56666653 1111 100011 224666555544 89999
Q ss_pred eEEeeccccceeccceEEEEEec
Q 007633 513 WNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
|.|+|-+ |.. |...+.|.+
T Consensus 74 y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 74 YGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEEETT--EEE--EEEEEEESS
T ss_pred EEEEeCC--Ccc--CEEEEEEeC
Confidence 9999988 555 888888875
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=94.21 E-value=0.17 Score=45.90 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=55.8
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+.|++.+.|. +..|.|.+=.... -+.+.||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi---------------------------k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTNI---------------------------NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSSC---------------------------EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCCe---------------------------EEEecCCceeEEEEEeCCCEEEE
Confidence 4678999999999997 5667775532211 13567888888999999999999
Q ss_pred Eeecc-ccceeccceEEEEEe
Q 007633 515 LRAEN-LDTWYLGQEVYVNVI 534 (595)
Q Consensus 515 ~HCHi-l~H~~~GM~~~~~V~ 534 (595)
+.|.. --+-|.+|...+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 445678999988886
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=93.94 E-value=0.19 Score=43.59 Aligned_cols=92 Identities=8% Similarity=0.013 Sum_probs=60.6
Q ss_pred eEEecCCC-cEEEEEEEcCCCc-----cceeeecCceEEEEEEeCCccCC--------CCCCCCCC-CC-CCcccEEEeC
Q 007633 433 SLINGTYK-GFMEIIFQNNDTT-----VQSYHMDGYAFFVVGMDFGVWTE--------NSRGTYNK-WD-GVARSTTQVF 496 (595)
Q Consensus 433 ~v~~~~~g-~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~G~~~~--------~~~~~~n~-~~-p~~rDTv~v~ 496 (595)
..++++.| +.|.+++.|.+.. .|-|-+ ...+ .... .....|-. .+ .....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~--~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSA--DVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGG--GHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCc--chhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 45788999 9999999999764 365543 2211 0000 00000100 01 1223455688
Q ss_pred CCcEEEEEEEec---CcceeEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD---NAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad---NPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||....+.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 8999999999877877 888888875
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=91.30 E-value=0.81 Score=39.49 Aligned_cols=92 Identities=11% Similarity=-0.011 Sum_probs=59.2
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC--------CCCCCCC-CCC-CcccEEEeC
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN--------SRGTYNK-WDG-VARSTTQVF 496 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~--------~~~~~n~-~~p-~~rDTv~v~ 496 (595)
.-+++ +.|+.|.+++.|.+... |-|-|- ..+ ..... ....|-. .++ ....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLT-------KDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEE-------EGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEc-------Ccc--chhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 35678 78999999999998653 655432 111 00000 0000100 111 122445678
Q ss_pred CCcEEEEEEEec--Ccce-eEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD--NAGI-WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||+...+.|.++ .||. +-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7876 999999877877 898888875
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=91.27 E-value=0.71 Score=39.80 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=59.6
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC--------CCCCC-CCCCC-CcccEEEeC
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN--------SRGTY-NKWDG-VARSTTQVF 496 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~--------~~~~~-n~~~p-~~rDTv~v~ 496 (595)
.-+++ +.|+.|.+++.|.+... |-|-|- .. +..... ....| .-.++ ...++..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~--------~~-~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVS--------KK-SDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEE--------ET-THHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEc--------cc-cchhhHHHhhhhccccccccccccchhhccceeeC
Confidence 34678 78999999999998653 665432 11 100000 00001 00111 123455689
Q ss_pred CCcEEEEEEEec--Ccce-eEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD--NAGI-WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||+...+.|.+. .||. +-|.|-+--|+. ||-..+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999887877 898888875
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=90.76 E-value=0.84 Score=39.35 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=58.8
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCce-EEEEEEeCCccCCCCCCCC-CCCCC-CcccEEEeCCCcEEEE
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYA-FFVVGMDFGVWTENSRGTY-NKWDG-VARSTTQVFPGAWTAI 503 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~-F~Vl~~g~G~~~~~~~~~~-n~~~p-~~rDTv~v~p~g~~~i 503 (595)
.-+++ +.|+.|.+++.|.+... |-|-+-... +.-++. .+ ........| .-.++ ....|-.|.||+...+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~-~~-m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIAT-DG-LSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHH-HH-TTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHH-HH-hhccccccccccccchhheeeeeeCCCCEEEE
Confidence 45688 79999999999997653 665442110 000000 00 000000001 00111 1233446899999999
Q ss_pred EEEec--Ccce-eEEeeccccceeccceEEEEE
Q 007633 504 LVYLD--NAGI-WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 504 rf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.+. .||. +-|.|-+--|+. ||-..+.|
T Consensus 96 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 96 TFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99998 7887 999999887877 88887776
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=88.55 E-value=1.1 Score=38.37 Aligned_cols=93 Identities=8% Similarity=0.018 Sum_probs=58.0
Q ss_pred eEEecCC-CcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCC-------CC-CCCC-CC-CCCCcccEEEeCCCcEE
Q 007633 433 SLINGTY-KGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTE-------NS-RGTY-NK-WDGVARSTTQVFPGAWT 501 (595)
Q Consensus 433 ~v~~~~~-g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~-------~~-~~~~-n~-~~p~~rDTv~v~p~g~~ 501 (595)
.-+.++. |+.|.++|.|.+... --.=||.| ||+.. +.... .. ...| +- +..+...|..|.||...
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~-~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTA-ADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEH-HHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceE-EEccc-chHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 4567875 999999999998652 00012333 44431 11100 00 0112 11 22345567789999999
Q ss_pred EEEEEec---CcceeEEeeccccceeccceEEEEE
Q 007633 502 AILVYLD---NAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 502 ~irf~ad---NPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.|.+. .||.|-|-|- -|+ ||-..+.|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999997 8999999999 688 89888876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 595 | ||||
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 7e-38 | |
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 2e-32 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 2e-30 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 5e-30 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 9e-30 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 3e-29 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 2e-28 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 2e-27 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 1e-26 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 7e-26 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 2e-22 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 4e-19 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 1e-16 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 3e-16 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 2e-13 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 8e-13 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 9e-13 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 9e-13 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 2e-12 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 6e-12 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 1e-11 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 4e-11 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 9e-11 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 4e-10 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 8e-10 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 8e-10 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 9e-10 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 2e-09 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 6e-05 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 0.001 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 0.001 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 0.004 |
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 136 bits (344), Expect = 7e-38
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 157 PFAVPDGDITIFISDWYTKSHKKLRKDVENG--VDLGVPDGILINGLGPYRYDAAIVPD- 213
PF DG+I + +SDW+ +S K + + +G P IL+NG G + A D
Sbjct: 1 PFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDS 59
Query: 214 -----------GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ 262
+ +V P KTYR+R+ + +LNF I NH LL+VE +G+Y
Sbjct: 60 NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 119
Query: 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPA 322
+++DI+ G+S+S L+TTDQN S +Y++ R + N G+ +L+Y +
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP---NTPPGLTLLNYLPN--SV 174
Query: 323 SGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARP 356
S PP + +++++ + ++A P
Sbjct: 175 SKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP 208
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 122 bits (306), Expect = 2e-32
Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 22/207 (10%)
Query: 368 TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKL---- 423
+LN +I G + +N +S P TP + A ++N+ A+ + P ++
Sbjct: 4 KFNRRIFLLN-TQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPED 62
Query: 424 -------MSRAPKVDTSLINGTYKGFMEIIFQ------NNDTTVQSYHMDGYAFFVVGMD 470
+ ++ + +++I Q N + +H+ G+ F+V+G
Sbjct: 63 YDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYG 122
Query: 471 FGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVY 530
G ++ + N + R+T +FP WTAI DN G+W ++G V
Sbjct: 123 DGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVV 182
Query: 531 VNVINPEIDKSAPLLPDNAIYCGLLSS 557
++ +P A+ CG +
Sbjct: 183 FAEGVEKV----GRIPTKALACGGTAK 205
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 113 bits (284), Expect = 2e-30
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL-----LTW 88
++ SP G + I +NG FP P++ +NV + L + + W
Sbjct: 6 ASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHW 65
Query: 89 NGVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+G +W DG N CPI +G ++ Y F V DQ G+F+Y L Q G G +
Sbjct: 66 HGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 148 I 148
+
Sbjct: 126 V 126
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 114 bits (285), Expect = 5e-30
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQL 219
D + I ++DWY ++ PD LING G Y +
Sbjct: 8 EDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGG-----PAAELSI 55
Query: 220 INVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFL 279
+NVE GK YR+R+ ++ + F I H L ++E +G T + I GQ +SF+
Sbjct: 56 VNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFV 115
Query: 280 VTTDQNASSDYYIVASPRF---VNSSEWNKVTGVAILHYSNSLG--PASGPLPDPPN 331
+ +Q +Y+I A P + + AIL Y+ + P + P+P
Sbjct: 116 LDANQPV-DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQ 171
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 112 bits (282), Expect = 9e-30
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQL 219
V D I I+DWY L + PD LINGLG + P +
Sbjct: 3 VDDASTVITIADWYHSLSTVLFPN--PNKAPPAPDTTLINGLGRNSAN----PSAGQLAV 56
Query: 220 INVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFL 279
++V+ GK YR R+ + + F I H + ++E +G ++ I GQ +S +
Sbjct: 57 VSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVV 116
Query: 280 VTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
V +Q A +Y+I A+P + + AI Y +
Sbjct: 117 VEANQ-AVGNYWIRANPSNGRNG-FTGGINSAIFRYQGA 153
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 110 bits (276), Expect = 3e-29
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLT-----W 88
T++ SP G + I +NG GP++ N N +NV NDLD P +L W
Sbjct: 7 DTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHW 65
Query: 89 NGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+G+ R +W DG G CPI G + Y+F G+F+Y Q G G ++
Sbjct: 66 HGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMV 125
Query: 148 INNRD 152
I + +
Sbjct: 126 IYDDN 130
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 109 bits (273), Expect = 2e-28
Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 11/176 (6%)
Query: 162 DGDIT-IFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLI 220
D D+ I+D+Y ++ L +N D +LING Y +
Sbjct: 2 DIDLGVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGEG-----QYANV 55
Query: 221 NVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLV 280
+ PGK +RLR+ N + NH + ++ + ++ + VGQ + ++
Sbjct: 56 TLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI 115
Query: 281 TTDQNASSDYYIVASPRFV-NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDT 335
+ +Y+ + AI HY+ + P P + D
Sbjct: 116 DASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGA--PGGLPTDEGTPPVDH 168
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 105 bits (263), Expect = 2e-27
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
Query: 32 VFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKN-----DLDEPLL 85
V D I P G + + G P++ + +NV + ++
Sbjct: 3 VALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATS 62
Query: 86 LTWNGVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYG 144
+ W+G + DG N CPI ++ Y F V Q G+++Y L Q G G
Sbjct: 63 IHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRG 122
Query: 145 GIIINNRD 152
++ + +
Sbjct: 123 AFVVYDPN 130
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 102 bits (256), Expect = 1e-26
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 33 FYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKN-DLDEPLLLTWNGV 91
Y W + Y+ +P ++ V+GINGQFPGP + +VVV + N E +++ W+G+
Sbjct: 5 HYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGI 64
Query: 92 QHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150
R W DG + C I G + Y F V D G+FFY L QR+AG YG +I++
Sbjct: 65 LQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDP 123
Query: 151 RD 152
Sbjct: 124 PQ 125
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 102 bits (254), Expect = 7e-26
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQL 219
V + I ++DWY + + + D LINGLG +
Sbjct: 9 VDNESTVITLTDWYHTAARLGPRF------PLGADATLINGLGRSASTP-----TAALAV 57
Query: 220 INVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFL 279
INV+ GK YR R+ ++ + F I HNL ++E +G + ++ I Q +SF+
Sbjct: 58 INVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFV 117
Query: 280 VTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPP 330
+ +Q +Y+I A+P F AIL Y + P + P
Sbjct: 118 LNANQTV-GNYWIRANPNFGTVGFAGG-INSAILRYQGA--PVAEPTTTQT 164
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 92.1 bits (228), Expect = 2e-22
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 34 YDWTISYVT--ASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-PLLLTWN 89
Y + ++ V P G K++V+ ING GP + V V V N+L + W+
Sbjct: 36 YVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWH 95
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIII 148
G+ + + DG G CPIP Q G+ +Y Q G G I I
Sbjct: 96 GIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQI 155
Query: 149 NNRDVIP 155
N +P
Sbjct: 156 NGPASLP 162
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 81.7 bits (201), Expect = 4e-19
Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTW 88
D TI ++ G G NG GP + + V V++ N L E L W
Sbjct: 13 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW 72
Query: 89 NGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYG 144
+G DG IP G + V + ++ P Q A G G
Sbjct: 73 HG--LEVPGEVDGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAG 128
Query: 145 GIIINNRDVIPL 156
++I + +++ L
Sbjct: 129 LVVIEDDEILKL 140
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 75.5 bits (185), Expect = 1e-16
Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 11/132 (8%)
Query: 32 VFYDWTISY--VTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWN 89
V + TI + G Q + NG PGP L V V + + N +
Sbjct: 33 VEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN---AMPH 89
Query: 90 GVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYF----PSLDFQRAAGGYGG 145
V+ + G + G T +F+ D+ G+F Y + + +G G
Sbjct: 90 NVEFHGATGALGG-AKLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGT 147
Query: 146 IIINNRDVIPLP 157
+++ RD + P
Sbjct: 148 LMVLPRDGLKDP 159
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 74.0 bits (181), Expect = 3e-16
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106
G + + +G PG ++ V V V N+ + V + Q G
Sbjct: 43 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSS---TVPHNVDFHAATGQGGG-AAA 98
Query: 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLD---FQRAAGGYGGIIINNRDVIP 155
G T+ F+ Q G + Y ++ A G YG I++ ++ +P
Sbjct: 99 TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP 149
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (163), Expect = 2e-13
Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 18/112 (16%)
Query: 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQD-------GVLGTNCPIPA 111
F GPI+ T V V++KN P +G+ + K + +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 132
Query: 112 GWNWTYQFQVKDQI---------GSFFYFPSLDFQR--AAGGYGGIIINNRD 152
G +TY ++ + Y +D + A+G G +II +D
Sbjct: 133 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKD 184
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 65.7 bits (159), Expect = 8e-13
Identities = 25/177 (14%), Positives = 48/177 (27%), Gaps = 20/177 (11%)
Query: 385 GKWRTTLNGISY-LPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443
+ +NG + P++ Y L V ++ +
Sbjct: 26 PLFVWKVNGSDINVDWGKPIID---------YILTGNTSYPVSDNIVQVDAVDQWTYWLI 76
Query: 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRG----------TYNKWDGVARSTT 493
E + + H+ G+ F V+G V + + N + R TT
Sbjct: 77 ENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTT 136
Query: 494 QVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAI 550
+ G W + DN G W G V ++ + ++
Sbjct: 137 MLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDF 193
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 64.3 bits (156), Expect = 9e-13
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 20/169 (11%)
Query: 164 DITIFISDWYTKSHKKLR--KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLIN 221
D+ + + D + ++ DV D +L NG ++ A
Sbjct: 10 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAA------------- 56
Query: 222 VEPGKTYRLRVHNVGISTSLNFR-IQNHNLLLVETEGSYTVQ-QNYTNMDIHVGQSFSFL 279
P RLR+ N + SLNF N L ++ ++G + + + + +G+ F L
Sbjct: 57 --PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVL 114
Query: 280 VTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPD 328
V + N D + + + ++ ASG LPD
Sbjct: 115 VEVNDNKPFDLVTLPVSQMGMAIAPFDKPH-PVMRIQPIAISASGALPD 162
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.7 bits (157), Expect = 9e-13
Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 18/112 (16%)
Query: 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN-------SWQDGVLGTNCPIPA 111
GP L + V+ KN +PL + G+++ K + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 112 GWNWTYQFQVKDQI---------GSFFYFPSLDFQR--AAGGYGGIIINNRD 152
G +TY++ + + + Y+ ++ +G G ++I +
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 63.2 bits (153), Expect = 2e-12
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 32 VFYDWTISY--VTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWN 89
V + TI + G + + NG PGP++ V N V + + N +
Sbjct: 32 VEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNT---LLH 88
Query: 90 GVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFY----FPSLDFQRAAGGYGG 145
+ + G G + G T +F+ + G F Y + + +G G
Sbjct: 89 NIDFHAATGALGG-GALTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGA 146
Query: 146 IIINNRD 152
I++ RD
Sbjct: 147 IMVLPRD 153
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 62.9 bits (152), Expect = 6e-12
Identities = 31/168 (18%), Positives = 46/168 (27%), Gaps = 18/168 (10%)
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEII 446
R T+NG +Y PS P +L A L + + ++
Sbjct: 35 GRFTINGTAYESPSVPTLLQIMSGAQSANDL----------LPAGSVYELPRNQVVELVV 84
Query: 447 FQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FPGAWTAILV 505
+H+ G+AF VV TYN + V R + G I
Sbjct: 85 PAGVLGGPHPFHLHGHAFSVVRSAGS-------STYNFVNPVKRDVVSLGVTGDEVTIRF 137
Query: 506 YLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553
DN G W G + + + A C
Sbjct: 138 VTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCE 185
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 61.4 bits (148), Expect = 1e-11
Identities = 29/157 (18%), Positives = 43/157 (27%), Gaps = 32/157 (20%)
Query: 28 GDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL 85
+Y+ T+ T ++ G NG FPGP + V N NV V N+L
Sbjct: 21 SKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHF 80
Query: 86 LTWNGVQH--------------------RKNSWQDGVL------GTNCPIPAGWNWTYQF 119
L + H DG P Y +
Sbjct: 81 LPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHY 140
Query: 120 QVKDQIGSFFY----FPSLDFQRAAGGYGGIIINNRD 152
+ + +Y AG G II++
Sbjct: 141 PNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 177
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (146), Expect = 4e-11
Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 22/119 (18%)
Query: 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS-----------WQDGVLG 104
+ GP++ + V N PL + GV+ KN+ V
Sbjct: 80 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPP 139
Query: 105 TNCPIPAGWNWTYQFQVKDQIGS---------FFYFPSLDFQR--AAGGYGGIIINNRD 152
+ + +TY++ V ++G Y+ ++D + G G + I +
Sbjct: 140 SASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 198
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 58.2 bits (140), Expect = 9e-11
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 11/127 (8%)
Query: 32 VFYDWTISYVTASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNG 90
++ I D Q + +G PGP++ V V + + N + +
Sbjct: 31 NEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPENT---MPHN 87
Query: 91 VQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPS-----LDFQRAAGGYGG 145
+ + G G I G +F+ + G+F Y + + + +G G
Sbjct: 88 IDFHAATGALGG-GGLTLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGC 145
Query: 146 IIINNRD 152
I++ RD
Sbjct: 146 IMVLPRD 152
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 57.2 bits (137), Expect = 4e-10
Identities = 35/190 (18%), Positives = 54/190 (28%), Gaps = 21/190 (11%)
Query: 365 GQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424
G + LN T+NG ++PP+ P++L + L
Sbjct: 15 GNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPG---- 70
Query: 425 SRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNK 484
++I+ +EI +H+ G+ F VV YN
Sbjct: 71 -------GAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTP-------GSSVYNY 114
Query: 485 WDGVARSTTQVFP-GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAP 543
+ V R + G DN G W L G V P I +
Sbjct: 115 VNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANA 174
Query: 544 LLPDNAIYCG 553
+ P C
Sbjct: 175 ISPAWDDLCP 184
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 56.8 bits (136), Expect = 8e-10
Identities = 30/170 (17%), Positives = 47/170 (27%), Gaps = 18/170 (10%)
Query: 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEII 446
+N S+ PP+ P++L A L + L +
Sbjct: 35 TNFFINNASFTPPTVPVLLQILSGAQTAQDLLPAGSV--------YPLPAHSTIEITLPA 86
Query: 447 FQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVF---PGAWTAI 503
+H+ G+AF VV TYN D + R G I
Sbjct: 87 TALAPGAPHPFHLHGHAFAVVRSAGS-------TTYNYNDPIFRDVVSTGTPAAGDNVTI 139
Query: 504 LVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553
DN G W L G + ++ + P+ + C
Sbjct: 140 RFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWSDLCP 189
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 55.6 bits (133), Expect = 8e-10
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 7/103 (6%)
Query: 52 VIGINGQFPGPILNVTTNWNVVVNVKNDLD---EPLLLTWNG--VQHRKNSWQDG-VLGT 105
++ + P L + V V N +T G G
Sbjct: 51 SFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGF 109
Query: 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIII 148
+ G F G+++Y + A G +G I++
Sbjct: 110 SPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 9e-10
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 19/101 (18%)
Query: 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQ 118
GP L+ V + KN P + +GVQ ++ P G TY
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTV--------TPTLPGETLTYV 134
Query: 119 FQVKDQIGS---------FFYFPSLDFQR--AAGGYGGIII 148
+++ ++ G+ + Y+ ++D + +G G +I+
Sbjct: 135 WKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIV 175
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 54.7 bits (131), Expect = 2e-09
Identities = 19/172 (11%), Positives = 50/172 (29%), Gaps = 9/172 (5%)
Query: 161 PDGDITIFISDWYTKSHKKLR-KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQL 219
+ D+ + I+D L +P+ ++ I+ +G +
Sbjct: 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA----FCGETILVNGKVWPY 60
Query: 220 INVEPGKTYRLRVHNVGISTSLNFRIQN-HNLLLVETEGSYTVQ-QNYTNMDIHVGQSFS 277
+ V + YR RV N + + N + N + + + ++G + + + + +
Sbjct: 61 LEV-EPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYD 119
Query: 278 FLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL-GPASGPLPD 328
++ + S + + L P
Sbjct: 120 IIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPK 171
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (96), Expect = 6e-05
Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 51 QVIGINGQFPG--PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108
++ +NG G P L + +VV + + +E + + +
Sbjct: 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERR--DTAN 103
Query: 109 IPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150
+ + T D G+F G +N
Sbjct: 104 LFPQTSLTLHMW-PDTEGTFNVECLTTDHYTGGMKQKYTVNQ 144
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 37.7 bits (87), Expect = 0.001
Identities = 9/82 (10%), Positives = 16/82 (19%), Gaps = 11/82 (13%)
Query: 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWT----------ENSRGTYNKWDGVARST 492
N H+ +F V+ + + T
Sbjct: 51 EIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDT 110
Query: 493 TQVFPGAWTAILVYL-DNAGIW 513
Q G I +G +
Sbjct: 111 IQAHAGEVLRIAATFGPYSGRY 132
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.5 bits (86), Expect = 0.001
Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 6/121 (4%)
Query: 33 FYDWTISYVTASPLGDKQQ---VIGINGQ-FPGPILNVTTNWNVVVNVKNDLDEPLLLTW 88
+YD + + + ING + P L + V +++ N +
Sbjct: 19 YYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVV 78
Query: 89 NGVQHR-KNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGII 147
+ + P+ G T + + + G + + + AG +
Sbjct: 79 HFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMK-ASKPGWWLLDTEVGEIQRAGMQTPFL 137
Query: 148 I 148
I
Sbjct: 138 I 138
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.004
Identities = 10/103 (9%), Positives = 25/103 (24%), Gaps = 7/103 (6%)
Query: 51 QVIGINGQFPG--PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN-C 107
++ +NG G P L++ V + +E + + + +
Sbjct: 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV---DVHAAFFHGQALTNKNYRIDTI 103
Query: 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150
+ + G + AG +
Sbjct: 104 NLFPATLFDAYMV-AQNPGEWMLSCQNLNHLKAGLQAFFQVQE 145
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.97 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.97 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.96 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.96 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.92 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.91 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.86 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.84 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.83 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.82 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.8 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.77 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.69 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.68 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.61 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.6 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.59 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.55 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.5 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.4 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.34 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.2 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.18 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.15 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.05 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.04 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.02 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.01 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.95 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.93 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.93 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.92 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.85 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.82 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.79 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.75 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.73 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.7 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.66 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.64 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.63 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.63 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.61 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.55 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.51 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.47 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.4 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.39 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.34 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.32 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.32 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.32 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 98.28 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.25 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.25 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.24 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.12 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.12 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 98.12 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 98.11 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.06 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 98.01 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 98.01 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 98.0 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.94 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.94 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.91 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.86 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.83 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.82 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.8 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.74 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.21 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.19 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.08 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.06 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.05 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 96.83 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 96.65 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 96.61 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 96.57 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 96.54 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.5 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.49 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 95.87 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 95.49 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 95.4 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 95.23 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.16 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 94.95 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 94.81 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 94.69 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 94.44 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 94.11 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 93.92 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 93.79 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 93.68 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 93.38 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 92.81 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 92.71 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 92.44 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 92.36 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 90.77 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 90.67 | |
| d3dtub1 | 152 | Cytochrome c oxidase {Rhodobacter sphaeroides [Tax | 82.36 | |
| d1ws8a_ | 104 | Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663 | 81.26 |
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=4.9e-40 Score=291.18 Aligned_cols=124 Identities=22% Similarity=0.386 Sum_probs=117.5
Q ss_pred CeEEEEEEEEEEEecCCCe-eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCCCC
Q 007633 30 PYVFYDWTISYVTASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G~-~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
++++|+|++++..++|||. .+++|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++..++++||++
T Consensus 1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~ 80 (136)
T d1v10a1 1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 80 (136)
T ss_dssp CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence 3689999999999999996 678999999999999999999999999999976 7899999999999999999999
Q ss_pred C-CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 104 G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 104 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
+ +||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++
T Consensus 81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 8 9999999999999999987899999999999999999999999998754
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=8.1e-40 Score=312.81 Aligned_cols=185 Identities=22% Similarity=0.397 Sum_probs=156.8
Q ss_pred ceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCC-----------CCCCCCCccceeEEe
Q 007633 368 TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPY-----------KLMSRAPKVDTSLIN 436 (595)
Q Consensus 368 ~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~-----------~p~~~~~~~~~~v~~ 436 (595)
..+|++.|..+.. ..+|..+|+|||++|..|++|++.+.+++..+.|+.+.+. .+.+...+.+++++.
T Consensus 4 ~~~~ti~l~~~~~-~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~ 82 (214)
T d1aoza3 4 KFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQ 82 (214)
T ss_dssp SCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEE
T ss_pred CCCeEEEEecCcc-ccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEE
Confidence 4568888866543 5788999999999999999999998887776666543221 112345678899999
Q ss_pred cCCCcEEEEEEEcCC------CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCc
Q 007633 437 GTYKGFMEIIFQNND------TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNA 510 (595)
Q Consensus 437 ~~~g~~ve~vi~N~~------~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNP 510 (595)
+++|++|||+|+|.+ ...||||||||+||||+++.|.|++.....+|+.+|.+|||+.|++++|++|||++|||
T Consensus 83 ~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnp 162 (214)
T d1aoza3 83 FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP 162 (214)
T ss_dssp ECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC
T ss_pred ecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCC
Confidence 999999999999964 34699999999999999999999988888899999999999999999999999999999
Q ss_pred ceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCccccccCccC
Q 007633 511 GIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCGLLSS 557 (595)
Q Consensus 511 G~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~~~~c~~~~~ 557 (595)
|.|+||||+++|++.|||+++.|... +..++|++++.||.+..
T Consensus 163 G~w~~HCH~~~H~~~GM~~~~~v~~~----~~~~~P~~~~~cg~~~~ 205 (214)
T d1aoza3 163 GVWAFHCHIEPHLHMGMGVVFAEGVE----KVGRIPTKALACGGTAK 205 (214)
T ss_dssp EEEEEEESSHHHHHTTCEEEEEECGG----GCCCCCHHHHSSHHHHH
T ss_pred eeEEEEECcHHHHhCcCcEEEEEccc----cccCCCccccccccchh
Confidence 99999999999999999999987533 35678999999997643
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=2.5e-38 Score=279.70 Aligned_cols=124 Identities=36% Similarity=0.772 Sum_probs=118.9
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
+.+|+|+|++++....|||..+++|+|||++|||+|+|++||+|+|+|+|+|+ +++++||||+++...+++||+++ +|
T Consensus 1 ~~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~ 80 (129)
T d1aoza1 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (129)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CcEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCcccccccccc
Confidence 35899999999999999999999999999999999999999999999999986 79999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
|+|+||++++|+|++ +++||||||||+..|+++||+|+|||+++++
T Consensus 81 ~~I~PG~s~~y~f~a-~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTT
T ss_pred ceECCCCEEEEEEEC-CCCCceEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 999999999999999 6899999999999999999999999999875
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=2.6e-38 Score=278.52 Aligned_cols=119 Identities=32% Similarity=0.609 Sum_probs=113.7
Q ss_pred EEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC-----CceeeeCCccCCCCCCCCCCCC-CC
Q 007633 33 FYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-----PLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.+||++++++++|||+.+.+++||| +|||+|++++||+|+|+|+|++++ +++|||||++++.++++||+++ +|
T Consensus 6 ~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~~ 84 (131)
T d1hfua1 6 VDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (131)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred cEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCccccc
Confidence 5899999999999999999999999 799999999999999999999974 5899999999999999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccC
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 152 (595)
|||.||++|+|+|++++++||||||||++.|+++||+|+|||++++
T Consensus 85 ~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred ceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 9999999999999987899999999999999999999999999975
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=6.6e-38 Score=276.05 Aligned_cols=119 Identities=28% Similarity=0.545 Sum_probs=114.6
Q ss_pred EEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 33 FYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.|+|++++++++|||..+.+|+|||++|||+|++++||+|+|+|+|+++ +++++||||+++..++++||+++ +|
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 6899999999999999999999999999999999999999999999976 67899999999999999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEecc
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 151 (595)
|+|.||++++|+|++++++||||||||++.|+++||+|+|||+++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence 999999999999999888999999999999999999999999985
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=3.2e-34 Score=262.74 Aligned_cols=125 Identities=30% Similarity=0.484 Sum_probs=114.0
Q ss_pred CCCeEEEEEEEEEEE--ecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVT--ASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~--~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
.+.+++|+|++++.. ++|||.. +.+|+|||++|||+|++++||+|+|+|+|+++ +.++|||||+++..++++||++
T Consensus 30 tg~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~ 109 (162)
T d2q9oa1 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGAN 109 (162)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCc
Confidence 346899999999765 6889865 57999999999999999999999999999985 8899999999999999999999
Q ss_pred C-CCCcc-CCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 104 G-TNCPI-PAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 104 ~-tq~~I-~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
+ +||+| +||++++|+|.+ +++||||||||++.|+++||+|+|||++++.
T Consensus 110 ~~~~~~i~~pg~~~~y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred ccccceecCCCCEEEeeecC-CCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 8 99997 559999999999 6899999999999999999999999998764
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-34 Score=257.25 Aligned_cols=123 Identities=24% Similarity=0.341 Sum_probs=112.4
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
+.+..+.|+|++++.+..++|....+|+|||++|||+|++++||+|+|+++|+|+++++|||||+++. +.+||++ +
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~--~ 86 (140)
T d1kv7a1 11 TTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--Q 86 (140)
T ss_dssp CCCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--T
T ss_pred cCCCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecC--CccCCCc--c
Confidence 34556789999999999999999999999999999999999999999999999999999999999874 6799986 7
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCC
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~ 153 (595)
++|.||++++|+|++++++||||||||. +.|+++||+|+|||+++++
T Consensus 87 ~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 87 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred ceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 8999999999999997668999999995 4799999999999998753
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=8.4e-33 Score=261.87 Aligned_cols=158 Identities=22% Similarity=0.226 Sum_probs=123.9
Q ss_pred EEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEE
Q 007633 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFF 465 (595)
Q Consensus 387 ~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~ 465 (595)
.+|+|||++|..+..|.+.....+..... ....+..++.++.+++++|++.|... ..||||||||+|+
T Consensus 35 ~~wtINg~s~~~~~~p~l~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~ 103 (200)
T d1hfua3 35 GRFTINGTAYESPSVPTLLQIMSGAQSAN-----------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 103 (200)
T ss_dssp TEEEETTBCCCCCSSCHHHHHHTTCCSGG-----------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEE
T ss_pred cEEEECCEeccCCCCChhhhhhcCCcCcc-----------cccccCceEEecCCcceEEEEeeccccccCceeecCCcEE
Confidence 37999999999888888766543221111 12234578899999999999988764 6799999999999
Q ss_pred EEEEeCCccCCCCCCCCCCCCCCcccEEEeC-CCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCC
Q 007633 466 VVGMDFGVWTENSRGTYNKWDGVARSTTQVF-PGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPL 544 (595)
Q Consensus 466 Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~-p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~ 544 (595)
||+++.+. .+++.+|++|||+.|+ +|+|++|||++||||.|+|||||++|++.|||+.|.+..++..+ ...
T Consensus 104 vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~-~~~ 175 (200)
T d1hfua3 104 VVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVD-ANN 175 (200)
T ss_dssp EEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHH-HCC
T ss_pred EEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCCCcEEEEEcCCCccc-ccC
Confidence 99997653 3678899999999997 56799999999999999999999999999999998766544322 344
Q ss_pred CCCc-cccccCccCCCcccc
Q 007633 545 LPDN-AIYCGLLSSLQKDQA 563 (595)
Q Consensus 545 ~p~~-~~~c~~~~~~~~~~~ 563 (595)
+|++ ...|+.++..++...
T Consensus 176 ~p~~~~~~C~~~~~~~~~~~ 195 (200)
T d1hfua3 176 PPVEWAQLCEIYDDLPPEAT 195 (200)
T ss_dssp CCHHHHHHHHHHHTCCHHHH
T ss_pred CChhhhcccccccccCCCCc
Confidence 5555 568999988765544
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=7.7e-31 Score=243.18 Aligned_cols=151 Identities=20% Similarity=0.322 Sum_probs=127.9
Q ss_pred CCce-eEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCce
Q 007633 162 DGDI-TIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTS 240 (595)
Q Consensus 162 d~e~-~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~ 240 (595)
|.|. +|+|+||||+...++......+ ..+.+|++|||||+.+.|... +....++|++|++|||||||+|..+.
T Consensus 2 D~D~~vi~lsDW~h~~~~~~~~~~~~~-~~p~~d~~LINGkg~~~~~~~-----~~~~~~~v~~g~~~rlR~iN~~~~~~ 75 (181)
T d2q9oa2 2 DIDLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVNPNTGE-----GQYANVTLTPGKRHRLRILNTSTENH 75 (181)
T ss_dssp SEEEEEEEEEEECSSCHHHHHHHHTTS-CCCCBSEEEETTBCBCTTTCC-----BCCCEEEECTTCEEEEEEEECCSSCC
T ss_pred CccCeeEEEEecCCCCHHHHHhhcccC-CCCCcceEEECCcCCCCCCCC-----CcceEEEECCCCEEEEEEecccCCcc
Confidence 6666 8999999999887776655444 346789999999998877543 34578999999999999999999999
Q ss_pred eeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC-CCCCcceEEEEEecCCC
Q 007633 241 LNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS-EWNKVTGVAILHYSNSL 319 (595)
Q Consensus 241 ~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~-~~~~~~~~ail~y~~~~ 319 (595)
+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|++++++| +||||+.....+.. ...+.+..|||+|.++.
T Consensus 76 ~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~-~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 76 FQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp EEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred EEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCc-cEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 99999999999999999999999999999999999999999998888 99999987543322 22456788999998754
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=6.7e-31 Score=240.90 Aligned_cols=151 Identities=26% Similarity=0.455 Sum_probs=125.4
Q ss_pred CCCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCce
Q 007633 161 PDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTS 240 (595)
Q Consensus 161 ~d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~ 240 (595)
.|.|++|+|+||+|+....+.. +.+...+.||+++|||++.+.|+++ ....+.++|++|++|||||||+|..+.
T Consensus 4 Dd~e~vi~lsDW~h~~~~~l~~--~~~~~~~~pd~~liNGkg~~~~~~~----~~~~~~~~v~~g~~~rlRlina~~~~~ 77 (168)
T d1v10a2 4 DDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPS----AGQLAVVSVQSGKRYRFRIVSTSCFPN 77 (168)
T ss_dssp CSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGG----GSCCCEEEECTTCEEEEEEEECCSSCC
T ss_pred CCCccEEEEEECCCCCHHHHHh--ccCCCCCCCceeeecCCCCcCCCCc----CCCceEEEECCCCEEEEEEEecccCce
Confidence 3578999999999987766533 2345567899999999999888654 235688999999999999999999999
Q ss_pred eeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 241 LNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 241 ~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|+++++++ +||||+.+...+.. .......|||+|.++.
T Consensus 78 ~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~-~y~ira~~~~~~~~-~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 78 YAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAA 154 (168)
T ss_dssp EEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCC
T ss_pred EEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCC-cEEEEEEeccCCCc-CCCCceEEEEEECCCC
Confidence 99999999999999999999999999999999999999999998888 99999987654432 2335678999998754
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=8.3e-32 Score=254.16 Aligned_cols=165 Identities=19% Similarity=0.194 Sum_probs=121.1
Q ss_pred eeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEE
Q 007633 369 VTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQ 448 (595)
Q Consensus 369 ~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~ 448 (595)
+++++.+... ...+..+|+|||++|.++..|++...+........ ......++.+..++++++++.
T Consensus 22 ~d~~~~~~~~---~~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~ 87 (190)
T d1v10a3 22 ADINLNLRIG---RNATTADFTINGAPFIPPTVPVLLQILSGVTNPND-----------LLPGGAVISLPANQVIEISIP 87 (190)
T ss_dssp SSEEEECCEE---CCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGG-----------SSSTTTEEEECTTCEEEEEEE
T ss_pred CCEEEEEEEE---ecCCEeEEEECCEecCCCCCchHHHhhcCCccccc-----------ccccceeEEccCccEEEEEec
Confidence 4556655542 12335679999999998899987665432211111 112345677888999999888
Q ss_pred cCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCc-EEEEEEEecCcceeEEeeccccceeccc
Q 007633 449 NNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGA-WTAILVYLDNAGIWNLRAENLDTWYLGQ 527 (595)
Q Consensus 449 N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g-~~~irf~adNPG~W~~HCHil~H~~~GM 527 (595)
|. +.||||||||+|+||+++.+. .+++.+|+||||+.|+++| |++|||++||||.|+|||||++|++.||
T Consensus 88 ~~--~~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM 158 (190)
T d1v10a3 88 GG--GNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGL 158 (190)
T ss_dssp CC--BSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTC
T ss_pred cC--ccccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhhCCC
Confidence 84 579999999999999986543 3678899999999999876 7889999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCCccccccCcc
Q 007633 528 EVYVNVINPEIDKSAPLLPDNAIYCGLLS 556 (595)
Q Consensus 528 ~~~~~V~~~~~~~~~~~~p~~~~~c~~~~ 556 (595)
|+.|.+..++-.+.....|+....|..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 187 (190)
T d1v10a3 159 AVVFAEDIPNIPIANAISPAWDDLCPKYN 187 (190)
T ss_dssp EEEEEESGGGHHHHSCCCHHHHTHHHHHT
T ss_pred cEEEEECCCCCCccCCCCHHHHhhhhhcc
Confidence 99998654432221222334456787664
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=3.9e-31 Score=240.91 Aligned_cols=119 Identities=24% Similarity=0.341 Sum_probs=102.1
Q ss_pred CCeEEEEEEEEEEEecCC--CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC--CceeeeCCccCCCCCCCCCCCC
Q 007633 29 DPYVFYDWTISYVTASPL--GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE--PLLLTWNGVQHRKNSWQDGVLG 104 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~--G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~--~~~iH~HG~~~~~~~~~DGv~~ 104 (595)
..+++|+|++++..+.++ |....+|+|||++|||+|+|++||+|+|+|+|.+++ +++|||||. ++++.+
T Consensus 30 ~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~-------~~~~~g 102 (159)
T d1oe2a1 30 PKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHGA-------TGALGG 102 (159)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTS-------CSGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCccccccceeeccc-------cCCCCC
Confidence 346899999999988775 889999999999999999999999999999999863 345555554 455555
Q ss_pred -CCCccCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCC
Q 007633 105 -TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIP 155 (595)
Q Consensus 105 -tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~ 155 (595)
++++|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+
T Consensus 103 ~~~~~I~PG~t~ty~f~a-~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~~ 157 (159)
T d1oe2a1 103 AKLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLK 157 (159)
T ss_dssp GGGCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCB
T ss_pred cccccCCCCCeEEEEEEc-CCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCCC
Confidence 77899999999999999 689999999994 579999999999999987643
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.97 E-value=3.4e-30 Score=247.42 Aligned_cols=190 Identities=31% Similarity=0.556 Sum_probs=149.4
Q ss_pred CCCCceeEeeeccccccHHHHHHHHhCC--CCCCCCCeEEEcCCCCCCCCCCC------------CCCCCCceeEEEecC
Q 007633 160 VPDGDITIFISDWYTKSHKKLRKDVENG--VDLGVPDGILINGLGPYRYDAAI------------VPDGIPYQLINVEPG 225 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~~~l~~~~~~g--~~~~~~d~~liNG~~~~~~~~~~------------~~~~~~~~~l~v~~G 225 (595)
.+|+|++|+|+||||....++...+..+ ...+.+|.++|||++.++|..+. .......+.++|++|
T Consensus 3 ~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 82 (209)
T d1aoza2 3 HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPK 82 (209)
T ss_dssp CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTT
T ss_pred CCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEEcCC
Confidence 3599999999999999877766555443 33567899999999999887541 112345688999999
Q ss_pred cEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCC
Q 007633 226 KTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305 (595)
Q Consensus 226 ~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~ 305 (595)
++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|+++++++++||+++....... .
T Consensus 83 ~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~---~ 159 (209)
T d1aoza2 83 KTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP---N 159 (209)
T ss_dssp CEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCC---C
T ss_pred CEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999887768999998765432 2
Q ss_pred CcceEEEEEecCCCCCCC--CCCCCCCCCCCcccccccccccccccccCCCCC
Q 007633 306 KVTGVAILHYSNSLGPAS--GPLPDPPNAYDTYFSMNQARSIRWNVSAGAARP 356 (595)
Q Consensus 306 ~~~~~ail~y~~~~~~~~--~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p 356 (595)
.....++++|.+...... .+.|..|.+ ..+++++.+++++++.+.+|
T Consensus 160 ~~~~~ail~y~~~~~~~~~~~~~p~~p~~----~D~~~a~~f~~~~~~~~~~p 208 (209)
T d1aoza2 160 TPPGLTLLNYLPNSVSKLPTSPPPQTPAW----DDFDRSKNFTYRITAAMGSP 208 (209)
T ss_dssp SCCEEEEEEETTSCTTSCCSSCCCCCCCT----TCHHHHHHHHTTCCBCTTCC
T ss_pred ccceeEEEEeCCCCcCCCCCCCCCCCCCc----cchHHHHhhhhhhhccCCCC
Confidence 367889999987653221 122233321 14566778888888776654
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.97 E-value=1.2e-31 Score=254.00 Aligned_cols=153 Identities=22% Similarity=0.232 Sum_probs=120.0
Q ss_pred EEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC---CccceeeecCce
Q 007633 387 WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND---TTVQSYHMDGYA 463 (595)
Q Consensus 387 ~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~ 463 (595)
.+|+|||++|.++..|.+++........+ ..+.+..++.++.+++++++++|.. ...||||||||+
T Consensus 35 ~~~~iNg~sf~~p~~p~l~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~ 103 (199)
T d1gyca3 35 TNFFINNASFTPPTVPVLLQILSGAQTAQ-----------DLLPAGSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHA 103 (199)
T ss_dssp SCEEETTBCCCCCSSCHHHHHHTTCCSTT-----------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCC
T ss_pred ceEEECCEecCCCCcchHHHHhcCCCCcc-----------cccccCceEEeccCceeEEEeecccccCCCceeeeecCCc
Confidence 47999999999999898776543222111 2233567788999999999999864 456999999999
Q ss_pred EEEEEEeCCccCCCCCCCCCCCCCCcccEEEe---CCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCC
Q 007633 464 FFVVGMDFGVWTENSRGTYNKWDGVARSTTQV---FPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDK 540 (595)
Q Consensus 464 F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v---~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~ 540 (595)
|+||+++.+. .+++.+|.+|||+.+ ++++|++|||++||||.|+||||+++|++.|||+.+. ..++...
T Consensus 104 F~vv~~~~~~-------~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~-~~~~~~~ 175 (199)
T d1gyca3 104 FAVVRSAGST-------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFA-EDVADVK 175 (199)
T ss_dssp EEEEECTTCC-------CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEE-ETHHHHH
T ss_pred EEEEeecCCC-------ccCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchhhHhccCcEEEE-EcCCccc
Confidence 9999997654 367788999999888 7899999999999999999999999999999999774 3333333
Q ss_pred CCCCCCCccc-cccCccCC
Q 007633 541 SAPLLPDNAI-YCGLLSSL 558 (595)
Q Consensus 541 ~~~~~p~~~~-~c~~~~~~ 558 (595)
...++|+... .|+.+...
T Consensus 176 ~~~~~p~~~~~~C~~~~~~ 194 (199)
T d1gyca3 176 AANPVPKAWSDLCPIYDGL 194 (199)
T ss_dssp HHCCCCHHHHHHHHHHHTC
T ss_pred ccCCCCHHHHhhhhhhccc
Confidence 3456676655 79988553
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=1.7e-30 Score=239.41 Aligned_cols=150 Identities=29% Similarity=0.543 Sum_probs=125.6
Q ss_pred CCCCCCCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeC
Q 007633 157 PFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVG 236 (595)
Q Consensus 157 ~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag 236 (595)
.|+.+|+|++|+|+||+|+....+ ...+.+|..+|||++.+.|... ...+.++|++|++|||||||+|
T Consensus 5 ~YD~dD~e~vl~l~DW~h~~~~~~-------~~~~~pd~~liNG~g~~~~~~~-----~~~~~~~v~~g~~~rlR~iN~~ 72 (172)
T d1hfua2 5 LYDEDDENTIITLADWYHIPAPSI-------QGAAQPDATLINGKGRYVGGPA-----AELSIVNVEQGKKYRMRLISLS 72 (172)
T ss_dssp GCSBCSTTSEEEEEEECSSCGGGC-------C---CCSEEEETTBCCBTTCCC-----CCCCEEEECTTCEEEEEEEECC
T ss_pred cCCCCCCeEEEEEEECCCCChHHh-------hccCCCCcEEECccCccCCCCC-----CCceEEEECCCCEEEEEEeeec
Confidence 355567899999999999866543 2345689999999998776432 4568999999999999999999
Q ss_pred CCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC---CCCCcceEEEE
Q 007633 237 ISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS---EWNKVTGVAIL 313 (595)
Q Consensus 237 ~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~---~~~~~~~~ail 313 (595)
+.+.+.|+|+||+|+|||+||.+++|+++++|.|++||||||+|+++++++ +|||++.....+.. ...+.+..|+|
T Consensus 73 ~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~-~Y~ira~~~~~~~~~~~~~~~~~~~aiL 151 (172)
T d1hfua2 73 CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAIL 151 (172)
T ss_dssp SSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEE
T ss_pred CCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCC-cEEEEEEeccCcccccCcCCCceEEEEE
Confidence 999999999999999999999999999999999999999999999998888 99999987654321 22346788999
Q ss_pred EecCCC
Q 007633 314 HYSNSL 319 (595)
Q Consensus 314 ~y~~~~ 319 (595)
+|+++.
T Consensus 152 ~Y~g~~ 157 (172)
T d1hfua2 152 RYAGAA 157 (172)
T ss_dssp EETTSC
T ss_pred EECCCC
Confidence 998764
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=8.6e-31 Score=238.33 Aligned_cols=119 Identities=21% Similarity=0.300 Sum_probs=103.7
Q ss_pred CCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-C
Q 007633 29 DPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
...++|+|++++.++. ++|...++|+|||++|||+|+|++||+|+|+|+|. ..++||||+++.+. +|+.++ .
T Consensus 29 ~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~~~~ 103 (157)
T d2bw4a1 29 PRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALGGGA 103 (157)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcCCcc
Confidence 3568999999988775 56999999999999999999999999999999996 56789999988754 445444 5
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccC----cchhhhcCceeeEEEeccCC
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPS----LDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~ 153 (595)
.++|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.
T Consensus 104 ~~~i~PGet~ty~f~a-~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e~ 154 (157)
T d2bw4a1 104 LTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDG 154 (157)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBC
T ss_pred eeeECcCCEEeEEEEC-CCCccceEEECCCCchHHHHhCCCEEEEEEeCCCC
Confidence 6789999999999999 68999999999 45799999999999998764
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.96 E-value=1.1e-30 Score=250.51 Aligned_cols=159 Identities=17% Similarity=0.169 Sum_probs=116.2
Q ss_pred CeEEEEecCeecC-CCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCC-CcEEEEEEEcC----CCccceee
Q 007633 385 GKWRTTLNGISYL-PPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTY-KGFMEIIFQNN----DTTVQSYH 458 (595)
Q Consensus 385 g~~~~~iNg~sf~-~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vi~N~----~~~~HP~H 458 (595)
...+|+|||++|. +++.|.+.....+.. .+ ....+++.+.. +.+..+++++. ....||||
T Consensus 26 ~~~~w~iNg~s~~~d~~~P~L~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~H 91 (216)
T d2q9oa3 26 PLFVWKVNGSDINVDWGKPIIDYILTGNT-SY-------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMH 91 (216)
T ss_dssp SSCEEEETTBCCCCCTTSCHHHHHHHTCC-CC-------------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEE
T ss_pred cEEEEEECCEecccCCCCCChhhhhcCCc-cc-------------ccccceeeccccccceeEEEEeccCCcccccccee
Confidence 3468999999985 678888765432111 11 11223334443 45555655553 34579999
Q ss_pred ecCceEEEEEEeCCccCCCC----------CCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccce
Q 007633 459 MDGYAFFVVGMDFGVWTENS----------RGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQE 528 (595)
Q Consensus 459 lHG~~F~Vl~~g~G~~~~~~----------~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~ 528 (595)
||||+||||+++.|.+.... ...+|+.+|++|||+.|+|+||++|||++||||.|+|||||++|++.|||
T Consensus 92 lHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~ 171 (216)
T d2q9oa3 92 LHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLS 171 (216)
T ss_dssp ESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCE
T ss_pred ecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEccCCcccccCCe
Confidence 99999999999988776542 13578999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCC--CCCCC-ccccccCccCC
Q 007633 529 VYVNVINPEIDKSA--PLLPD-NAIYCGLLSSL 558 (595)
Q Consensus 529 ~~~~V~~~~~~~~~--~~~p~-~~~~c~~~~~~ 558 (595)
+.| |..|++.... ..+|+ ....|++++..
T Consensus 172 ~~~-~~~p~~~~~~~~~~~~~~~~~~C~~w~~~ 203 (216)
T d2q9oa3 172 VDF-LERPADLRQRISQEDEDDFNRVCDEWRAY 203 (216)
T ss_dssp EEE-EECHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEE-EEcchhhhhcccCCCchhhhccChhhccc
Confidence 988 5666544222 23343 45799988664
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=3.7e-30 Score=233.69 Aligned_cols=132 Identities=11% Similarity=-0.052 Sum_probs=103.6
Q ss_pred eeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEE
Q 007633 369 VTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQ 448 (595)
Q Consensus 369 ~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~ 448 (595)
..|++.|.... ...|+..|+|||++|.+| .. .+++.|++++|.|.
T Consensus 12 ~~r~~~l~~~~--~~~g~~~~~ing~~~~~~---~~------------------------------~~~~~G~~e~W~i~ 56 (154)
T d1gska3 12 NIRTLKLAGTQ--DEYGRPVLLLNNKRWHDP---VT------------------------------ETPKVGTTEIWSII 56 (154)
T ss_dssp EEEEEEEEEEE--CTTSCEEEEETTBCTTSC---CC------------------------------BCCBTTCEEEEEEE
T ss_pred eEEEEEEcccc--cccCCceEEECCcCcCCC---cc------------------------------cccCCCCEEEEEEE
Confidence 34666665432 344566799999988532 10 13578999999999
Q ss_pred cCCCccceeeecCceEEEEEEeCCccCCC----------CCCCCCCCCCCcccEEEeCCCcEEEEEEE-ecCcceeEEee
Q 007633 449 NNDTTVQSYHMDGYAFFVVGMDFGVWTEN----------SRGTYNKWDGVARSTTQVFPGAWTAILVY-LDNAGIWNLRA 517 (595)
Q Consensus 449 N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~----------~~~~~n~~~p~~rDTv~v~p~g~~~irf~-adNPG~W~~HC 517 (595)
|.+.+.|||||||++||||+++.+.+... ........++.||||+.++|+++++|||+ +||||.|+|||
T Consensus 57 N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HC 136 (154)
T d1gska3 57 NPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC 136 (154)
T ss_dssp ECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred eCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEec
Confidence 99999999999999999999976543211 01123345678999999999999999998 69999999999
Q ss_pred ccccceeccceEEEEEec
Q 007633 518 ENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 518 Hil~H~~~GM~~~~~V~~ 535 (595)
||++|+|.|||+.++|++
T Consensus 137 Hil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 137 HILEHEDYDMMRPMDITD 154 (154)
T ss_dssp SCHHHHTTTCEEEEEEBC
T ss_pred CcchHhhCcCceEEEEeC
Confidence 999999999999999974
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=3.7e-29 Score=229.69 Aligned_cols=145 Identities=28% Similarity=0.479 Sum_probs=121.3
Q ss_pred CCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCcee
Q 007633 162 DGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSL 241 (595)
Q Consensus 162 d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~ 241 (595)
+.|++|+|+||||+.... .+.....++..+|||++.+.|.. .+..+.++|++||+|||||||+|..+.+
T Consensus 11 ~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~~~~~~-----~~~~~~~~v~~g~~~rlRlIN~~~~~~~ 79 (170)
T d1gyca2 11 NESTVITLTDWYHTAARL------GPRFPLGADATLINGLGRSASTP-----TAALAVINVQHGKRYRFRLVSISCDPNY 79 (170)
T ss_dssp SGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCBTTCT-----TSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred CCceEEEEeecCCChhhh------cccCCCcCCcccccCccccCCCC-----CCCceEEEECCCCEEEEEEeecCCCcee
Confidence 366899999999975421 23344568999999999876633 2456889999999999999999999999
Q ss_pred eEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 242 NFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 242 ~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
.|+|+||+|+|||+||.+++|..+++|.|++||||||+|+++++++ +||||+.....+.. .......|||+|+++.
T Consensus 80 ~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~-~y~ira~~~~~~~~-~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 80 TFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG-NYWIRANPNFGTVG-FAGGINSAILRYQGAP 155 (170)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSC
T ss_pred eEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCC-cEEEEEeccccccc-cCCCeeEEEEEECCCC
Confidence 9999999999999999999999999999999999999999998888 99999987654432 2235668999998654
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=1e-29 Score=230.28 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=98.9
Q ss_pred CCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCC
Q 007633 29 DPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNC 107 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~ 107 (595)
..+++|+|++++.+++. +|...++|+|||++|||+|+|++||+|+|+|+|+++ .+..||||++ +...+||.. ..+
T Consensus 28 ~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h--~~~~~~~~~-~~~ 103 (153)
T d1mzya1 28 PVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDFH--AATGALGGG-GLT 103 (153)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEET--TSCSGGGGG-GGC
T ss_pred CeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCccc--cCCcCCCCC-ccc
Confidence 34789999999999986 588899999999999999999999999999999854 3334444443 334455544 345
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCc-----chhhhcCceeeEEEeccC
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSL-----DFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-----~~q~~~Gl~G~liV~~~~ 152 (595)
+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++
T Consensus 104 ~i~PG~t~ty~f~a-~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 104 LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred cccCCCEEEEEEEc-CCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 89999999999999 699999999994 368999999999999875
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.96 E-value=1.8e-29 Score=228.74 Aligned_cols=122 Identities=20% Similarity=0.206 Sum_probs=104.3
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGT 105 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~t 105 (595)
....+..+++++.+.+.+. +|..+++|+|||++|||+|+|++||+|+|+|+|++ .++||||+++....+.||.. +
T Consensus 22 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~~---~~~~~H~~~~h~~~~~~~~~-~ 97 (151)
T d1kbva1 22 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP---SSTVPHNVDFHAATGQGGGA-A 97 (151)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECT---TCSSCBCCEETTCCSGGGGT-T
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcCC---CCceeeeccccccccCCCCc-c
Confidence 3445678999999888765 59999999999999999999999999999999974 45777777777666666543 6
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCc---chhhhcCceeeEEEeccCC
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSL---DFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~ 153 (595)
++.|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++.
T Consensus 98 ~~~i~PG~t~~y~f~a-~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 98 ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC
T ss_pred eeeeCCCCEEEEEEeC-CCCeEEEEECCCCChHHHHhCCCEEEEEEECCCC
Confidence 7889999999999999 689999999994 4699999999999998764
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.3e-29 Score=234.99 Aligned_cols=126 Identities=22% Similarity=0.257 Sum_probs=106.6
Q ss_pred ccCCCeEEEEEEEEEEEe--cCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC----------------------
Q 007633 26 FGGDPYVFYDWTISYVTA--SPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD---------------------- 81 (595)
Q Consensus 26 ~a~~~~~~~~l~~~~~~~--~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~---------------------- 81 (595)
+..+..+.|++++++.+. .+|+.+.++|+|||++|||+|+|++||+|+|+++|+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~ 98 (181)
T d1gska1 19 QQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPE 98 (181)
T ss_dssp EECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCS
T ss_pred ccCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCC
Confidence 334567889999998775 45788899999999999999999999999999999985
Q ss_pred CCceeeeCCccCCCCCCCCCCCC---CCC---ccCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEecc
Q 007633 82 EPLLLTWNGVQHRKNSWQDGVLG---TNC---PIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNR 151 (595)
Q Consensus 82 ~~~~iH~HG~~~~~~~~~DGv~~---tq~---~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~ 151 (595)
.+++|||||+++. +.+||.+. +++ ++.+|++++|+|.+++++||||||||. +.|+++||+|+|||+++
T Consensus 99 ~~t~iH~HG~~~~--~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~ 176 (181)
T d1gska1 99 VKTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 176 (181)
T ss_dssp CCBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred CcceeeeeccccC--CccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCc
Confidence 3589999999764 67999873 444 455668889999997668999999995 57999999999999987
Q ss_pred CC
Q 007633 152 DV 153 (595)
Q Consensus 152 ~~ 153 (595)
++
T Consensus 177 ~~ 178 (181)
T d1gska1 177 KE 178 (181)
T ss_dssp GG
T ss_pred cc
Confidence 64
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=1.8e-25 Score=206.56 Aligned_cols=125 Identities=16% Similarity=0.270 Sum_probs=97.9
Q ss_pred CeEEEEEEEEEEEe--cCCCe----------eEE--EEEEcCC------------CCCCeEEeecCCEEEEEEEECCCCC
Q 007633 30 PYVFYDWTISYVTA--SPLGD----------KQQ--VIGINGQ------------FPGPILNVTTNWNVVVNVKNDLDEP 83 (595)
Q Consensus 30 ~~~~~~l~~~~~~~--~~~G~----------~~~--~~~~Ng~------------~PgP~I~v~~Gd~v~v~v~N~l~~~ 83 (595)
++|+|.+-|.+.++ +|.+. .++ ...|+++ +|||+||+++||+|+|+|+|.++++
T Consensus 2 ~~r~y~iaa~e~~WdY~P~~~~~~~~~~g~~ykK~~y~eyd~tf~~~~~~~~~~g~~GP~Ira~~GD~i~V~f~N~~~~~ 81 (180)
T d1sdda1 2 KLRQFYVAAQSIRWNYRPESTHLSSKPFETSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNKAHKP 81 (180)
T ss_dssp CCCEECCEEEEEEEC--------------CCEEEEEEECCCTTTCCCCCCCSSCCSCCCCEEEETTCEEEEEEEECSSSC
T ss_pred ceEEEEEEEEEEeeccCCCcccccCccCCceEEEEEEEEeccceeeccCCCcccCCcCCeEEEECCcEEeeEEEeCCCCC
Confidence 46778777777764 44331 122 2345665 6999999999999999999999999
Q ss_pred ceeeeCCccCC----CCCCCCCCCC---CCCccCCCCeEEEEEEECCc---------eeeeEEccCcc--hhhhcCceee
Q 007633 84 LLLTWNGVQHR----KNSWQDGVLG---TNCPIPAGWNWTYQFQVKDQ---------IGSFFYFPSLD--FQRAAGGYGG 145 (595)
Q Consensus 84 ~~iH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~~---------~Gt~wYH~H~~--~q~~~Gl~G~ 145 (595)
++|||||+.+. +..+.||++. .+++|+||++|+|+|.++++ +||||||||.. .|+.+||+|+
T Consensus 82 ~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G~ 161 (180)
T d1sdda1 82 LSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGP 161 (180)
T ss_dssp BCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEE
T ss_pred ccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCCCCCEEEEEecCCCcHHHhhCCceEE
Confidence 99999999864 3456787774 44689999999999999743 58999999975 6899999999
Q ss_pred EEEeccCCC
Q 007633 146 IIINNRDVI 154 (595)
Q Consensus 146 liV~~~~~~ 154 (595)
|||+++...
T Consensus 162 lIV~~~g~l 170 (180)
T d1sdda1 162 LLICKKGTL 170 (180)
T ss_dssp EEEECTTCB
T ss_pred EEEccCCCC
Confidence 999998653
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.8e-25 Score=206.62 Aligned_cols=91 Identities=10% Similarity=0.060 Sum_probs=77.2
Q ss_pred EecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcE-EEEEEEecC--c
Q 007633 435 INGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAW-TAILVYLDN--A 510 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~-~~irf~adN--P 510 (595)
+.++.|++|+|+|.|.++ ..|||||||+.|+|++++.+... ..++.|||||.|+|+++ ++|+|.+++ +
T Consensus 87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~ 158 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFNHDAPKE 158 (181)
T ss_dssp EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence 467899999999999876 57999999999999999765432 23478999999998765 567887754 6
Q ss_pred ceeEEeeccccceeccceEEEEE
Q 007633 511 GIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 511 G~W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|+||||+++|+|.|||..|+|
T Consensus 159 G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 159 HAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp GCEEEEESSHHHHHTTCEEEEEC
T ss_pred CeEEEeCChHHHHhCCCCEEEEC
Confidence 99999999999999999999886
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3e-24 Score=202.41 Aligned_cols=96 Identities=18% Similarity=0.319 Sum_probs=80.5
Q ss_pred CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCC------CCCCC-CCCccCCCCeEEEEEEECCcee-
Q 007633 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQ------DGVLG-TNCPIPAGWNWTYQFQVKDQIG- 126 (595)
Q Consensus 59 ~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~------DGv~~-tq~~I~PG~~~~Y~f~~~~~~G- 126 (595)
++||+|++++||+|+|+|+|+++++++|||||+++. +.++. +|... ++|+|+||++|+|+|+++++.|
T Consensus 83 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~gP 162 (207)
T d2j5wa3 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGP 162 (207)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGGSC
T ss_pred CcCceEEEECCCEEEEEEEECCCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCCCC
Confidence 789999999999999999999999999999999763 22222 33333 7899999999999999986666
Q ss_pred --------eeEEccCcc--hhhhcCceeeEEEeccCCC
Q 007633 127 --------SFFYFPSLD--FQRAAGGYGGIIINNRDVI 154 (595)
Q Consensus 127 --------t~wYH~H~~--~q~~~Gl~G~liV~~~~~~ 154 (595)
|||||||.. .|+++||+|+|||++++..
T Consensus 163 ~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~l 200 (207)
T d2j5wa3 163 TNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSL 200 (207)
T ss_dssp CSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTCB
T ss_pred ccCCCCceeEEEccCCChhHhhccCceEEEEEccCCCC
Confidence 999999976 5779999999999998653
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.1e-23 Score=193.34 Aligned_cols=95 Identities=24% Similarity=0.366 Sum_probs=83.6
Q ss_pred CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCCCCCCC---CCCccCCCCeEEEEEEECC--------
Q 007633 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQDGVLG---TNCPIPAGWNWTYQFQVKD-------- 123 (595)
Q Consensus 59 ~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~-------- 123 (595)
+|||+|+|++||+|+|+|+|+++++++|||||+++. +..+.||+.. ++++|+||++++|+|++++
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~d 152 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccCC
Confidence 799999999999999999999999999999999875 3455677653 6789999999999999964
Q ss_pred -ceeeeEEccCcc--hhhhcCceeeEEEeccCC
Q 007633 124 -QIGSFFYFPSLD--FQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 124 -~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~ 153 (595)
++||||||||.. .|+++||+|+|||++++.
T Consensus 153 ~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 368999999975 599999999999999865
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=4e-23 Score=188.58 Aligned_cols=85 Identities=25% Similarity=0.391 Sum_probs=75.5
Q ss_pred CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee---------eeE
Q 007633 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG---------SFF 129 (595)
Q Consensus 59 ~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G---------t~w 129 (595)
++||+|++++||+|+|+|+|.++++++|||||+.+.. .+ +++|+||++++|+|+++++.| |||
T Consensus 83 ~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~--~~------~~~v~PGet~tY~w~v~~~~gp~~~d~~c~t~~ 154 (179)
T d2j5wa4 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTES--ST------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWA 154 (179)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSC--SC------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEE
T ss_pred ccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCC--CC------CCcccCCccEEEEEEecCccCCccCCCCceeEE
Confidence 6799999999999999999999999999999997642 23 468999999999999976555 999
Q ss_pred EccCcc--hhhhcCceeeEEEecc
Q 007633 130 YFPSLD--FQRAAGGYGGIIINNR 151 (595)
Q Consensus 130 YH~H~~--~q~~~Gl~G~liV~~~ 151 (595)
||||.. .|.++||+|+|||+.+
T Consensus 155 YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 155 YYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EECCTTHHHHHHTTCEEEEEEECC
T ss_pred EecCCCcHHHhhCCCeEEEEEEeC
Confidence 999986 5788999999999976
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=5.5e-22 Score=181.09 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=105.1
Q ss_pred CCCceeEeeeccccccHHHHHHH--HhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC
Q 007633 161 PDGDITIFISDWYTKSHKKLRKD--VENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS 238 (595)
Q Consensus 161 ~d~e~~l~l~d~~~~~~~~l~~~--~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~ 238 (595)
..+|++|+|+||+++++..+... .........+|.++|||+.. |.+.++ |++|||||+|++..
T Consensus 7 g~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~~~-~~~~RlR~iNa~~~ 71 (165)
T d1kv7a2 7 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY--------------PQHAAP-RGWLRLRLLNGCNA 71 (165)
T ss_dssp TTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSS--------------CEEEEE-EEEEEEEEEECCSS
T ss_pred CCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCccc--------------ceEecc-CcEEEEEEEEcccC
Confidence 46789999999988755432110 00001123578999999987 778875 67999999999999
Q ss_pred ceeeEEE-eCCceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccC-CCCCCCcceEEEEEe
Q 007633 239 TSLNFRI-QNHNLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN-SSEWNKVTGVAILHY 315 (595)
Q Consensus 239 ~~~~~~i-~gh~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~-~~~~~~~~~~ail~y 315 (595)
+.++|++ +||+|+||+.||+++ +|..++++.|+|||||||+|++++.+ .+.++....... ...........++++
T Consensus 72 ~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 149 (165)
T d1kv7a2 72 RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK--PFDLVTLPVSQMGMAIAPFDKPHPVMRI 149 (165)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECTTC--CEEEEECCCSSTTTTSTTTTSCEEEEEE
T ss_pred ceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCCCC--cEEEEEEecCCCCccccCCCCCcccEEe
Confidence 9999998 699999999999999 69999999999999999999998644 454444322111 111111234566676
Q ss_pred cCCCCCCCCCCCC
Q 007633 316 SNSLGPASGPLPD 328 (595)
Q Consensus 316 ~~~~~~~~~~lp~ 328 (595)
.....+.+.++|+
T Consensus 150 ~~~~~~~~~~LP~ 162 (165)
T d1kv7a2 150 QPIAISASGALPD 162 (165)
T ss_dssp EEEEEECCCCCCS
T ss_pred cCCCCCCCCCCch
Confidence 5443333334443
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=4.6e-21 Score=176.43 Aligned_cols=142 Identities=17% Similarity=0.284 Sum_probs=104.7
Q ss_pred CCCceeEeeeccccccHHHHHHHHh-----------CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEE
Q 007633 161 PDGDITIFISDWYTKSHKKLRKDVE-----------NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYR 229 (595)
Q Consensus 161 ~d~e~~l~l~d~~~~~~~~l~~~~~-----------~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~r 229 (595)
.+.|++|+|+||.++.+.++..... .......+|.++|||+.. +.++|++ ++||
T Consensus 5 gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~--------------p~~~v~~-~~~R 69 (174)
T d1gska2 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP-RKYR 69 (174)
T ss_dssp GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS-SEEE
T ss_pred CCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccc--------------eEEEecC-ceEE
Confidence 4789999999998875544321100 011223468899999997 8888875 6799
Q ss_pred EEEEEeCCCceeeEEEe-CCceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCc
Q 007633 230 LRVHNVGISTSLNFRIQ-NHNLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKV 307 (595)
Q Consensus 230 lRliNag~~~~~~~~i~-gh~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~ 307 (595)
|||||++..+.+.|+|+ ||+|+|||+||.++ +|+.++++.|+|||||||+|++++.+| .+++..+..... ......
T Consensus 70 lRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g-~~~~l~~~~~~~-~~~~~~ 147 (174)
T d1gska2 70 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG-ESIILANSAGCG-GDVNPE 147 (174)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTT-CEEEEEECCCSS-SCCCTT
T ss_pred EEEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCC-ceEEEEccCCCC-CccCCC
Confidence 99999999999999995 88999999999999 599999999999999999999998777 555444332211 111223
Q ss_pred ceEEEEEecCCC
Q 007633 308 TGVAILHYSNSL 319 (595)
Q Consensus 308 ~~~ail~y~~~~ 319 (595)
....+++|....
T Consensus 148 ~~~~vl~~~v~~ 159 (174)
T d1gska2 148 TDANIMQFRVTK 159 (174)
T ss_dssp TTTEEEEEECCS
T ss_pred CCcceEEEEecC
Confidence 344677776443
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.5e-22 Score=177.68 Aligned_cols=85 Identities=16% Similarity=0.298 Sum_probs=76.2
Q ss_pred EecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 435 INGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.++.|+.|+|.|.|.+. ..||+|+||+.|++... .+.+|||+.|+||++.+++|++||||.
T Consensus 62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~----------------g~~~~dtv~i~pg~~~~~~~~a~~pG~ 125 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHR----------------GVYSSDVFDIFPGTYQTLEMFPRTPGI 125 (149)
T ss_dssp CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTT----------------TCEEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeecc----------------CCCCcceEEECCCceEEEEEeCCCCee
Confidence 467899999999999764 46999999999987432 246799999999999999999999999
Q ss_pred eEEeeccccceeccceEEEEEec
Q 007633 513 WNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
|+||||+++|++.|||+.|.|++
T Consensus 126 w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 126 WLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEECCHHHHHTTCEEEEEEEC
T ss_pred EEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999975
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.83 E-value=2.5e-21 Score=175.64 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=86.8
Q ss_pred CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECC---CCCceeeeCCccCCC--CCCCCCCCC-CCCccCCCCeEEEEE
Q 007633 46 LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDL---DEPLLLTWNGVQHRK--NSWQDGVLG-TNCPIPAGWNWTYQF 119 (595)
Q Consensus 46 ~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~--~~~~DGv~~-tq~~I~PG~~~~Y~f 119 (595)
.|.....+.+||+ |||+|+|++||+|+|+|+|.. +.++.||+||..... ....++.+. .++.+.||++++|.|
T Consensus 45 ~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f 123 (153)
T d1e30a_ 45 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNF 123 (153)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEE
T ss_pred cccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEE
Confidence 4888888999997 899999999999999999974 356778888876532 222333333 779999999999999
Q ss_pred EECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 120 QVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 120 ~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
++++++||||||||...|+..||+|.|||+
T Consensus 124 ~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 124 TWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 988899999999999999999999999996
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.7e-22 Score=179.17 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=78.5
Q ss_pred CCCCccceeEEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEE
Q 007633 425 SRAPKVDTSLINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA 502 (595)
Q Consensus 425 ~~~~~~~~~v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~ 502 (595)
||..+.+.+.+.++.|+.|+|.|.|.+. ..||||+||+.|++. ..++||+.|+|++..+
T Consensus 51 NG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~-------------------~~~~dt~~i~pg~~~t 111 (145)
T d2j5wa2 51 NGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWR-------------------GERRDTANLFPQTSLT 111 (145)
T ss_dssp TTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEET-------------------TEEESEEEECTTCEEE
T ss_pred CCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEec-------------------ccCccceEECCCCEEE
Confidence 3433444556788999999999999654 459999999999863 2358999999999999
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
++|++|+||.|+||||+++|++.|||..++|.
T Consensus 112 ~~~~a~~pG~w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 112 LHMWPDTEGTFNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp EEECCCSCEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred EEEEcCCCEeEEEEcCCHHHHhCCCeEEEEEe
Confidence 99999999999999999999999999999985
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=1.9e-21 Score=173.09 Aligned_cols=85 Identities=13% Similarity=0.221 Sum_probs=75.3
Q ss_pred EEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 434 LINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
.+.+..|+.|+|.|.|.+. ..||+|+||+.|.+.+. ++.++||+.|+||++.+++|++||||
T Consensus 53 ~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~----------------~~~~~dt~~i~pg~~~t~~~~~~~pG 116 (139)
T d1sddb2 53 GLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGT----------------QQHQLGVWPLLPGSFKTLEMKASKPG 116 (139)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSS----------------SCEEESSEEECTTEEEEEEEECCSSE
T ss_pred ccccccCCcEEEEEEecCCCCCcccEEEcceEEEeccC----------------CCCcCCeEEECCCCEEEEEEecCCCE
Confidence 3567889999999999764 46999999999986433 24578999999999999999999999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|+||||+++|++.||++.+.|+
T Consensus 117 ~w~~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 117 WWLLDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EEEEECCCHHHHTTTCEEEEEEE
T ss_pred eEEEEeCCHHHHhccCcEEEEEC
Confidence 99999999999999999999985
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=3e-21 Score=173.62 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=80.1
Q ss_pred CCCCCccceeEEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEE
Q 007633 424 MSRAPKVDTSLINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWT 501 (595)
Q Consensus 424 ~~~~~~~~~~v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~ 501 (595)
.||..+...+.+.++.|+.|+|.|.|.+. ..||+|+||+.|.+ ++.++||+.|+|+++.
T Consensus 51 iNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~ 111 (146)
T d1kcwa2 51 VNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLF 111 (146)
T ss_dssp SSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEE
T ss_pred ECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEE
Confidence 34545555566789999999999999764 56999999999842 3567999999999999
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+++|++||||.|+||||++.|++.||++.++|.
T Consensus 112 ~v~f~~~~pG~w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 112 DAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp EEEEEECSCEEEEEEECCHHHHHTCCEEEEEEE
T ss_pred EEEEEcCCCeeEEEEcCCHHHHhcCCeEEEEEE
Confidence 999999999999999999999999999999986
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.80 E-value=1.7e-21 Score=167.75 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=55.8
Q ss_pred EecCCCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 435 INGTYKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.++.|++|+|.|.|.+ +..||+|+||+.|++. +.++||+.|+|++..+++|++||||.
T Consensus 37 ~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~ 97 (116)
T d1sdda2 37 ITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGR 97 (116)
T ss_dssp CCCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CC
T ss_pred eEEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeE
Confidence 35789999999999965 4569999999999862 34689999999999999999999999
Q ss_pred eEEeeccccceeccceEEE
Q 007633 513 WNLRAENLDTWYLGQEVYV 531 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~ 531 (595)
|+||||+++|++.||++++
T Consensus 98 w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 98 WTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCBCCSTTTGGGTCBCCC
T ss_pred EEEEcCCHHHHHccceecC
Confidence 9999999999999999853
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.77 E-value=2.9e-19 Score=160.67 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=79.4
Q ss_pred EEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 434 LINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
.+.++.|+.|+|.|.|.+ ...||||+||++|+++..+++.+. ...+||+.|+||++.+++|++||||.
T Consensus 52 ~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~-----------~~~~~T~~v~pg~~~~~~f~a~~PG~ 120 (151)
T d1kbva2 52 ALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI-----------NENVQSTIVPAGGSAIVEFKVDIPGN 120 (151)
T ss_dssp CEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE-----------ECSBSEEEECTTEEEEEEEEECSCEE
T ss_pred ceEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcCC-----------cccceeEecccCceeEEeeecCCCce
Confidence 357889999999999964 567999999999999976543221 13579999999999999999999999
Q ss_pred eEEeeccc-cceeccceEEEEEecCCC
Q 007633 513 WNLRAENL-DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 513 W~~HCHil-~H~~~GM~~~~~V~~~~~ 538 (595)
|+||||++ +|+++||+..+.|..+++
T Consensus 121 y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 121 YTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 99999976 557999999999987764
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3.2e-17 Score=146.93 Aligned_cols=95 Identities=11% Similarity=-0.029 Sum_probs=82.8
Q ss_pred EEEEEcCCCCC--CeEEeecCCEEEEEEEECC--CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 51 QVIGINGQFPG--PILNVTTNWNVVVNVKNDL--DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 51 ~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
.+++|||+.+| |.+++++||+|+++|.|.. +..+++|+||...... +....+++|.||++++|+|++ +++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~----~~~~dt~~i~pg~~~~v~f~~-~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNK----NYRIDTINLFPATLFDAYMVA-QNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCS----SSCCSEEEECTTCEEEEEEEE-CSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeecc----CCCcceEEecCCCEEEEEEEc-CCCe
Confidence 67999999999 9999999999999999975 4668999999866422 222245899999999999999 6899
Q ss_pred eeEEccCcchhhhcCceeeEEEec
Q 007633 127 SFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 127 t~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
+||||||...|+..||.|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999974
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.69 E-value=3.1e-17 Score=145.50 Aligned_cols=96 Identities=16% Similarity=0.093 Sum_probs=83.4
Q ss_pred EEEEEEcCCC-CCCeEEeecCCEEEEEEEECC--CCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCce
Q 007633 50 QQVIGINGQF-PGPILNVTTNWNVVVNVKNDL--DEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQI 125 (595)
Q Consensus 50 ~~~~~~Ng~~-PgP~I~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~ 125 (595)
-.+++|||.. +.|.|++++||+|+++|.|.. +..+++||||..... ..+|... .+++|.||++++|+|++ +++
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~~-~~p 115 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMKA-SKP 115 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEEC-CSS
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEec-CCC
Confidence 4679999975 899999999999999999975 466899999987642 3445444 67899999999999999 689
Q ss_pred eeeEEccCcchhhhcCceeeEEE
Q 007633 126 GSFFYFPSLDFQRAAGGYGGIII 148 (595)
Q Consensus 126 Gt~wYH~H~~~q~~~Gl~G~liV 148 (595)
|+||||||...|...||+|.++|
T Consensus 116 G~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 116 GWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEE
T ss_pred EeEEEEeCCHHHHhccCcEEEEE
Confidence 99999999999999999999998
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.5e-17 Score=148.71 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=82.8
Q ss_pred EEEEEcCCCCC--CeEEeecCCEEEEEEEECC--CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 51 QVIGINGQFPG--PILNVTTNWNVVVNVKNDL--DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 51 ~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
.+++|||+.+| |.|++++||+|++++.|.. +..+++|+||..... ++....+++|+||++.+|+|++ +++|
T Consensus 46 ~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~~~dt~~i~pg~~~t~~~~a-~~pG 120 (145)
T d2j5wa2 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGERRDTANLFPQTSLTLHMWP-DTEG 120 (145)
T ss_dssp EEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTEEESEEEECTTCEEEEEECC-CSCE
T ss_pred ceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cccCccceEECCCCEEEEEEEc-CCCE
Confidence 68999999999 9999999999999999964 466999999986532 2222245889999999999999 6899
Q ss_pred eeEEccCcchhhhcCceeeEEEec
Q 007633 127 SFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 127 t~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
+||||||...|+..||.|.++|+.
T Consensus 121 ~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 121 TFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhCCCeEEEEEec
Confidence 999999999999999999999973
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.8e-17 Score=147.64 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=86.7
Q ss_pred EEEEEEcCCCCC--CeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCc
Q 007633 50 QQVIGINGQFPG--PILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQ 124 (595)
Q Consensus 50 ~~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~ 124 (595)
..+++|||+.+| |.|++++||+|+++|.|... ..+++|+||.... ...+|.+. .++.|+||++.+|+|++ ++
T Consensus 46 ~~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~--~~~~g~~~~dtv~i~pg~~~~~~~~a-~~ 122 (149)
T d2j5wa5 46 NKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQ--YKHRGVYSSDVFDIFPGTYQTLEMFP-RT 122 (149)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEE--ETTTTCEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEee--eeccCCCCcceEEECCCceEEEEEeC-CC
Confidence 378999999998 88999999999999999764 5799999998654 34567665 66899999999999999 78
Q ss_pred eeeeEEccCcchhhhcCceeeEEEec
Q 007633 125 IGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 125 ~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
+|+||||||...|...||.|.++|.+
T Consensus 123 pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 123 PGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp CEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CeeEEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999999975
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.68 E-value=2.9e-17 Score=147.49 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=84.1
Q ss_pred EEEEEcCCCCCCe----EEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCCC----C-CCCccCCCCeEEEEEE
Q 007633 51 QVIGINGQFPGPI----LNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGVL----G-TNCPIPAGWNWTYQFQ 120 (595)
Q Consensus 51 ~~~~~Ng~~PgP~----I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~-tq~~I~PG~~~~Y~f~ 120 (595)
..++|||+.++++ |++++||+|+|++.|.. .+++++|+||.+... -|.||.. . ..+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~-v~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK-VYVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeE-EecCCCcCCcccceeEecccCceeEEeee
Confidence 3589999988776 99999999999999964 578999999998643 3566654 2 4478999999999999
Q ss_pred ECCceeeeEEccCcchh-hhcCceeeEEEeccCC
Q 007633 121 VKDQIGSFFYFPSLDFQ-RAAGGYGGIIINNRDV 153 (595)
Q Consensus 121 ~~~~~Gt~wYH~H~~~q-~~~Gl~G~liV~~~~~ 153 (595)
+ +++|+||||||.-.+ ...||+|.|+|+++++
T Consensus 115 a-~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 V-DIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp E-CSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred c-CCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9 689999999996444 5679999999998754
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.61 E-value=2e-17 Score=141.88 Aligned_cols=91 Identities=16% Similarity=0.116 Sum_probs=65.2
Q ss_pred EEEEEcCCCCC--CeEEeecCCEEEEEEEECC--CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 51 QVIGINGQFPG--PILNVTTNWNVVVNVKNDL--DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 51 ~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l--~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
.+|+|||..+| |.|++++||+|+++|.|.. +..+++|+||.... .+|....+++|.||++.+|+|++ +.+|
T Consensus 22 ~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~----~~~~~~dtv~i~pg~~~~v~~~a-~~pG 96 (116)
T d1sdda2 22 LMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SPEG 96 (116)
T ss_dssp EEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC---------C
T ss_pred cEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEeccccc----cCCcccceEeecccEEEEEEEEc-CCCe
Confidence 57999999998 6799999999999999954 56789999999764 23333355889999999999999 6899
Q ss_pred eeEEccCcchhhhcCceeeE
Q 007633 127 SFFYFPSLDFQRAAGGYGGI 146 (595)
Q Consensus 127 t~wYH~H~~~q~~~Gl~G~l 146 (595)
+||||||...|...||+|.|
T Consensus 97 ~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 97 RWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCBCCSTTTGGGTCBCCC
T ss_pred EEEEEcCCHHHHHccceecC
Confidence 99999999999999999864
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.60 E-value=1.1e-15 Score=133.52 Aligned_cols=96 Identities=13% Similarity=0.059 Sum_probs=81.2
Q ss_pred CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCce
Q 007633 46 LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI 125 (595)
Q Consensus 46 ~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 125 (595)
++....+++.+++|++|+|+|++||+|+++++|.......+|+|++...+ .+..+.||++.+|+|++ +++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~---------~~~~~~PG~~~~~~F~a-~~~ 105 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG---------VAMEIGPQMTSSVTFVA-ANP 105 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEEC-CSC
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhc---------cccccCCCEEEEEEEeC-CCC
Confidence 45667889999999999999999999999999998888899999995432 13568999999999999 689
Q ss_pred eeeEEccCcchhh-hcCceeeEEEecc
Q 007633 126 GSFFYFPSLDFQR-AAGGYGGIIINNR 151 (595)
Q Consensus 126 Gt~wYH~H~~~q~-~~Gl~G~liV~~~ 151 (595)
|+||||||.-... ..||+|.|+|+|+
T Consensus 106 G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 106 GVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eEEEEECccccCcchhcCEEEEEEEcC
Confidence 9999999953222 2599999999985
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.59 E-value=8.2e-16 Score=138.60 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=77.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcc--cEEEeCCCcEEEEEEEecCc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVAR--STTQVFPGAWTAILVYLDNA 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~r--DTv~v~p~g~~~irf~adNP 510 (595)
+.++++.|+.|.++..|. +..|+||+||.+|.+|..+ |.+. +++.+ +|+.|+|++.+++.|++++|
T Consensus 66 ~~l~akvGErV~i~~~~~-n~~s~fHliG~hFD~V~~~-G~~~----------~~p~~~~qTv~VppG~a~~ve~~f~~P 133 (173)
T d2bw4a2 66 HALTAAVGERVLVVHSQA-NRDTRPHLIGGHGDYVWAT-GKFR----------NPPDLDQETWLIPGGTAGAAFYTFRQP 133 (173)
T ss_dssp GCEEEETTCEEEEEEEES-SSCBCEEEETCCEEEEETT-CCTT----------SCCEEEESCCCBCTTEEEEEEEECCSC
T ss_pred cCcccccCCeEEEEecCC-CCCccceeccceeEEECCC-Cccc----------CCCcCCceeEEccCCccEEEEEEecCc
Confidence 567889999997655444 6679999999999999763 3321 34444 49999999999999999999
Q ss_pred ceeEEeecc-ccceeccceEEEEEecCCCC
Q 007633 511 GIWNLRAEN-LDTWYLGQEVYVNVINPEID 539 (595)
Q Consensus 511 G~W~~HCHi-l~H~~~GM~~~~~V~~~~~~ 539 (595)
|.|+||||. .+|++.|||..++|..++..
T Consensus 134 G~y~~v~H~l~ea~~~G~~g~l~V~G~~~p 163 (173)
T d2bw4a2 134 GVYAYVNHNLIEAFELGAAGHFKVTGEWND 163 (173)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred eEEEEEechHHHHHhCCCEEEEEEcCCCCc
Confidence 999999996 57899999999999866543
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.55 E-value=1.2e-14 Score=123.46 Aligned_cols=96 Identities=19% Similarity=0.081 Sum_probs=77.8
Q ss_pred EEecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEE
Q 007633 41 VTASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQF 119 (595)
Q Consensus 41 ~~~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f 119 (595)
.++..+|.. +.++..|+.++.++|+|++||+|+++++|.....+++++|+... +..+.||++.+|+|
T Consensus 16 ~~~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~------------~~~~~pG~t~~~~f 83 (112)
T d1ibya_ 16 PELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGV------------QEVIKAGETKTISF 83 (112)
T ss_dssp EEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEE
T ss_pred ceeccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCCCceeeeeccccc------------ccccCCcceEEEEE
Confidence 445667876 56677888877669999999999999999987778877777522 25689999999999
Q ss_pred EECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 120 QVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 120 ~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
++ +++|+||||||...+ ..||.|.|+|.+
T Consensus 84 ~~-~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 84 TA-DKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EC-CSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred Ee-ccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 99 689999999997533 367999999974
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.50 E-value=1.8e-14 Score=129.44 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=78.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCccc--EEEeCCCcEEEEEEEecCc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARS--TTQVFPGAWTAILVYLDNA 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD--Tv~v~p~g~~~irf~adNP 510 (595)
+.++++.|+.|.|+. +..+..++||+||.+|..|-. .|.+ .+++.|| |+.|+|++-+++.|++++|
T Consensus 66 ~~l~akvGe~Vri~~-~~~N~~ssfHlIG~hfD~V~~-~G~~----------~n~p~~~~qT~~V~pG~~~~v~~tf~~P 133 (177)
T d1oe1a2 66 NALTAKVGETVLLIH-SQANRDTRPHLIGGHGDWVWE-TGKF----------ANPPQRDLETWFIRGGSAGAALYTFKQP 133 (177)
T ss_dssp GCEEEETTCEEEEEE-EESSSCBCEEETTCCEEEEET-TCCT----------TSCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred CCcccccCCeEEEEe-cCCCCCccceecccccceEcc-CCee----------CCCCCcCceeEEecCCccEEEEEEecCc
Confidence 456889999998864 445788999999999998864 3432 2456676 9999999999999999999
Q ss_pred ceeEEeecc-ccceeccceEEEEEecCCCC
Q 007633 511 GIWNLRAEN-LDTWYLGQEVYVNVINPEID 539 (595)
Q Consensus 511 G~W~~HCHi-l~H~~~GM~~~~~V~~~~~~ 539 (595)
|.|+||||. .+|++.|||..++|..++.+
T Consensus 134 G~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~p 163 (177)
T d1oe1a2 134 GVYAYLNHNLIEAFELGAAGHIKVEGKWND 163 (177)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred eEEEEEecHHHHHHhcCCeEEEEecCCCCc
Confidence 999999996 46899999999999866543
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.40 E-value=9.9e-14 Score=104.60 Aligned_cols=46 Identities=17% Similarity=0.434 Sum_probs=41.2
Q ss_pred ccCCCCeEEEEEEECCcee---------eeEEccCcc--hhhhcCceeeEEEeccCC
Q 007633 108 PIPAGWNWTYQFQVKDQIG---------SFFYFPSLD--FQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 153 (595)
+|+||++|+|+|++++..| |||||||.. .|+.+||+|+|||++++.
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 5899999999999986665 999999986 589999999999998865
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.34 E-value=1.9e-13 Score=122.88 Aligned_cols=92 Identities=11% Similarity=-0.042 Sum_probs=72.9
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE-ecCc
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY-LDNA 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~-adNP 510 (595)
+.+.++.|+.|+|.|.|.++ ..||||||.+.+.+...+.. ....+...++..+.||+...++|. +++|
T Consensus 60 Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~----------~~~~~~~~~~~~v~pg~~~~~~f~~~~~p 129 (153)
T d1e30a_ 60 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVPKDGKFGYTNFTWHPTA 129 (153)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCC----------CSEEEEBCCCCCCBTTEEEEEEEEECCCS
T ss_pred CeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccc----------cccCCCccceeeecCCCEEEEEEEeCCCC
Confidence 35789999999999999764 67999999987654333211 111234567778889999999997 5889
Q ss_pred ceeEEeeccccceeccceEEEEEe
Q 007633 511 GIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 511 G~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
|.|.||||+..|...||...+.|.
T Consensus 130 Gty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 130 GTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEEeCCchhHHHCCCEEEEEEC
Confidence 999999999999999999998873
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.20 E-value=8.7e-12 Score=108.21 Aligned_cols=90 Identities=18% Similarity=0.102 Sum_probs=67.9
Q ss_pred EecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 435 INGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
+.++.|+.|+|.+.|.. ...+.+|.||.++. . ..+... ...-+...|.||+....+|.+++||+|
T Consensus 36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~--~---~~~~~~---------~~~~~~~~I~PG~s~~y~f~a~~~Gt~ 101 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR--G---TPWADG---------TASISQCAINPGETFFYNFTVDNPGTF 101 (129)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCT--T---CGGGSC---------CBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEeCCCCCCeeeeeccceee--c---cCcccc---------ccccccceECCCCEEEEEEECCCCCce
Confidence 56889999999999974 34567788877641 1 111110 111223357899999999999999999
Q ss_pred EEeeccccceeccceEEEEEecCCC
Q 007633 514 NLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+||||+..|...||...+.|.+++.
T Consensus 102 ~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 102 FYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EEEECSTTTGGGTCEEEEEEECCTT
T ss_pred EEecCCHHHHhCCCEEEEEEcCCCC
Confidence 9999999999999999999987765
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.18 E-value=2.8e-11 Score=104.75 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=75.6
Q ss_pred CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 47 G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
+....++....+|..|.|+|++||+|.++++|.....-.+|.+++...+ .+..+.||++.++.|++ +++|
T Consensus 36 ~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~---------v~~~~~PG~t~~~~f~~-~~~G 105 (131)
T d1qnia1 36 KVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHG---------VSMEISPQQTASVTFTA-GKPG 105 (131)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEEC-CSSE
T ss_pred ceeEEEEEeccCCccceEEecCCCEEEEEEEccCCCCcceEEEEEeccC---------cccccCCCceEEEEEEc-CCCE
Confidence 4567789999999999999999999999999987666566666663321 12458899999999999 7999
Q ss_pred eeEEccCcc-hhhhcCceeeEEEecc
Q 007633 127 SFFYFPSLD-FQRAAGGYGGIIINNR 151 (595)
Q Consensus 127 t~wYH~H~~-~q~~~Gl~G~liV~~~ 151 (595)
+|||||+.- .....||.|.|+|+|.
T Consensus 106 ~y~~~C~~~cg~~H~~M~g~i~Vepa 131 (131)
T d1qnia1 106 VYWYYCNWFCHALHMEMVGRMLVEAA 131 (131)
T ss_dssp EEEEECCSCCSTTGGGCEEEEEEECC
T ss_pred EEEEECccccCcchhcCeeEEEEEeC
Confidence 999999952 1112589999999973
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.15 E-value=1.1e-10 Score=103.97 Aligned_cols=83 Identities=14% Similarity=0.104 Sum_probs=63.4
Q ss_pred EEecCCCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 434 LINGTYKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
.+.++.|+.|+|.+.|.. ...|.+|+||.... .+. .....|.||+....+|++++||
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~~-----~~~----------------~~~~~i~PG~t~ty~f~a~~~G 121 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGA-----LGG----------------GGLTLINPGEKVVLRFKATRAG 121 (153)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSG-----GGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred cEEEeCCCEEEEEEEcCCCCceEccCccccCCcC-----CCC----------------CccccccCCCEEEEEEEcCCCc
Confidence 467899999999999954 34588888886421 010 1111478999999999999999
Q ss_pred eeEEeecc-----ccceeccceEEEEEecCC
Q 007633 512 IWNLRAEN-----LDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 512 ~W~~HCHi-----l~H~~~GM~~~~~V~~~~ 537 (595)
.|+||||. ..|...||...+.|..+|
T Consensus 122 t~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 122 AFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp EEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred eEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 99999994 458889999988886554
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.05 E-value=4.3e-10 Score=100.02 Aligned_cols=82 Identities=15% Similarity=0.051 Sum_probs=58.9
Q ss_pred EEecCCCcEEEEEEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 434 LINGTYKGFMEIIFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
.+.++.|+.|+|.+.|.... .|.+|+|+... +.|. ...+ .+.||+....+|.+++||
T Consensus 59 ~i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~~-----~~~~--------------~~~~--~i~PG~t~~y~f~a~~~G 117 (151)
T d1kbva1 59 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG--------------AAAT--FTAPGRTSTFSFKALQPG 117 (151)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG--------------TTTT--CBCTTEEEEEEEECCSCE
T ss_pred eEEEECCCEEEEEEEcCCCCceeeecccccccc-----CCCC--------------ccee--eeCCCCEEEEEEeCCCCe
Confidence 35788999999999996443 24444444321 1110 1122 267999999999999999
Q ss_pred eeEEeecc---ccceeccceEEEEEecC
Q 007633 512 IWNLRAEN---LDTWYLGQEVYVNVINP 536 (595)
Q Consensus 512 ~W~~HCHi---l~H~~~GM~~~~~V~~~ 536 (595)
.|+||||. ..|.++||+..+.|.++
T Consensus 118 t~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 118 LYIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp EEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred EEEEECCCCChHHHHhCCCEEEEEEECC
Confidence 99999995 45899999999888544
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.04 E-value=4.8e-10 Score=100.43 Aligned_cols=142 Identities=12% Similarity=0.044 Sum_probs=105.0
Q ss_pred CCCCceeEeeeccccccH------------HHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 160 VPDGDITIFISDWYTKSH------------KKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~------------~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
.+|+++++.-+|+|...+ ......++. .....|+.+.+||+...- ...-.++++.||+
T Consensus 6 ~yD~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~Pt~vvFNG~v~al---------tg~~~l~akvGEr 75 (173)
T d2bw4a2 6 TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGER 75 (173)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCE
T ss_pred ccceEEEecccEeecCCCCCCCccCcCChhhcchhHHHH-HhccCCCEEEECCCcccc---------ccccCcccccCCe
Confidence 459999999999996221 111111111 012468999999976511 1224699999996
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEeecCcceee--eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCC
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ--QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p--~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~ 305 (595)
| ||+|++.+...+||++|+.|.++..+|.+..| ...+++.|.+|++..+.++++ .|| .|.++++......
T Consensus 76 V--~i~~~~~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~-~PG-~y~~v~H~l~ea~---- 147 (173)
T d2bw4a2 76 V--LVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPG-VYAYVNHNLIEAF---- 147 (173)
T ss_dssp E--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCE-EEEEEESSHHHHH----
T ss_pred E--EEEecCCCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEec-Cce-EEEEEechHHHHH----
Confidence 6 67888899999999999999999999998863 346799999999999999999 578 9999998643211
Q ss_pred CcceEEEEEecCCC
Q 007633 306 KVTGVAILHYSNSL 319 (595)
Q Consensus 306 ~~~~~ail~y~~~~ 319 (595)
.....++|.+.+..
T Consensus 148 ~~G~~g~l~V~G~~ 161 (173)
T d2bw4a2 148 ELGAAGHFKVTGEW 161 (173)
T ss_dssp TTSCEEEEEEESCC
T ss_pred hCCCEEEEEEcCCC
Confidence 13567899997654
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.02 E-value=7.2e-11 Score=105.69 Aligned_cols=83 Identities=18% Similarity=0.183 Sum_probs=60.8
Q ss_pred EEecCCCcEEEEEEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 434 LINGTYKGFMEIIFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
++.++.|+.|+|.+.|.... .|.+|+||... +.+. ...-.|.||+..+++|++++||
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a~~pG 123 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTNTLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKATKPG 123 (157)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEEeCCCCcceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence 46789999999999996432 35555555321 1110 0111378999999999999999
Q ss_pred eeEEeec----cccceeccceEEEEEecCC
Q 007633 512 IWNLRAE----NLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 512 ~W~~HCH----il~H~~~GM~~~~~V~~~~ 537 (595)
.|.|||| +..|...||...+.|..+|
T Consensus 124 t~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 124 VFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred cceEEECCCCchHHHHhCCCEEEEEEeCCC
Confidence 9999999 5678899999999886554
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.01 E-value=1.2e-10 Score=104.74 Aligned_cols=91 Identities=14% Similarity=0.021 Sum_probs=70.0
Q ss_pred EEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 434 LINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
.|.++.|+.|+|.+.|.. ...+.+|+||.++.......|. +.......++++++...+|.++.+|.
T Consensus 68 tI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~-------------~~~~~~~i~~pg~~~~y~f~~~~~Gt 134 (162)
T d2q9oa1 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGA-------------NGVTECPIPPKGGQRTYRWRARQYGT 134 (162)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC-------------BTTTBCCBCTTTEEEEEEEECCSCEE
T ss_pred eEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCC-------------cccccceecCCCCEEEeeecCCCCEE
Confidence 357889999999999965 4668899999987421111110 11122234678999999999999999
Q ss_pred eEEeeccccceeccceEEEEEecCC
Q 007633 513 WNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
|+||||+..|...||...+.|.+|+
T Consensus 135 ~wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 135 SWYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEeecCCHHHHhCCCEEEEEECCCC
Confidence 9999999999999999999998775
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.95 E-value=4.3e-09 Score=94.04 Aligned_cols=142 Identities=13% Similarity=0.048 Sum_probs=105.8
Q ss_pred CCCCceeEeeeccccccHH------------HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 160 VPDGDITIFISDWYTKSHK------------KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~~------------~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
.+|+++++.-+|+|...++ +....++. .....|+.+.+||+.... .....++++.||+
T Consensus 6 ~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~P~~vvFNG~~gal---------t~~~~l~akvGe~ 75 (177)
T d1oe1a2 6 HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGAL---------TGANALTAKVGET 75 (177)
T ss_dssp CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCE
T ss_pred ccceEEEecccEeecCCCCCCCccccCChhhcchhHHHH-HhccCCcEEEECCccccc---------cCCCCcccccCCe
Confidence 4599999999999973211 11111110 011468999999997622 1124699999998
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEeecCcceee--eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCC
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ--QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p--~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~ 305 (595)
|| |++++++...+||+.|+.|..|..+|.+..+ ..++++.|.+|++..+.++++ .|| .|.++++......
T Consensus 76 Vr--i~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~-~PG-~Y~fV~H~L~ea~---- 147 (177)
T d1oe1a2 76 VL--LIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFK-QPG-VYAYLNHNLIEAF---- 147 (177)
T ss_dssp EE--EEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCE-EEEEEESSHHHHH----
T ss_pred EE--EEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEec-Cce-EEEEEecHHHHHH----
Confidence 85 5788889999999999999999999998864 346899999999999999998 578 9999998743211
Q ss_pred CcceEEEEEecCCC
Q 007633 306 KVTGVAILHYSNSL 319 (595)
Q Consensus 306 ~~~~~ail~y~~~~ 319 (595)
.....|+|.+.+..
T Consensus 148 ~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 148 ELGAAGHIKVEGKW 161 (177)
T ss_dssp TTSCEEEEEEESCC
T ss_pred hcCCeEEEEecCCC
Confidence 14577899988654
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.93 E-value=1.2e-09 Score=95.71 Aligned_cols=91 Identities=15% Similarity=0.128 Sum_probs=65.9
Q ss_pred CCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccC------------------CCCCCCCCCCCCCCccCCCCeEEEE
Q 007633 59 FPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQH------------------RKNSWQDGVLGTNCPIPAGWNWTYQ 118 (595)
Q Consensus 59 ~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~------------------~~~~~~DGv~~tq~~I~PG~~~~Y~ 118 (595)
|--.+|+|++||+|++.++|.-. .++.++...... ...+.++.+......+.||++.++.
T Consensus 29 F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~ 108 (139)
T d1qhqa_ 29 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 108 (139)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEE
Confidence 43469999999999999999754 455554332210 0011111111122458999999999
Q ss_pred EEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 119 FQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 119 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
|+++ ++|+||||||...|+..||.|.|+|.|
T Consensus 109 f~~~-~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 109 FRTP-APGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EECC-SSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EecC-CCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 9995 799999999999999999999999975
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.93 E-value=2.1e-10 Score=102.70 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=64.2
Q ss_pred EEecCCCcEEEEEEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 434 LINGTYKGFMEIIFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
.+.++.|+.|+|.+.|..+. .|.+|+||..+.+ .|. .+ -.|.||+...++|.++.||
T Consensus 66 tI~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~----~g~-------~~----------~~I~PG~t~ty~f~a~~~G 124 (159)
T d1oe2a1 66 TLVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL----GGA-------KL----------TNVNPGEQATLRFKADRSG 124 (159)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG----GGG-------GG----------CCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEECCCccccccceeeccccCCC----CCc-------cc----------ccCCCCCeEEEEEEcCCCc
Confidence 35788999999999997654 4778889865311 010 01 0378999999999999999
Q ss_pred eeEEeec----cccceeccceEEEEEecCCC
Q 007633 512 IWNLRAE----NLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 512 ~W~~HCH----il~H~~~GM~~~~~V~~~~~ 538 (595)
.|.|||| +..|...||...+.|..++.
T Consensus 125 t~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~ 155 (159)
T d1oe2a1 125 TFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG 155 (159)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECTTC
T ss_pred eEEEEeCCCCCchhHHhCCCEEEEEEECCCC
Confidence 9999999 45688999999998865543
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.92 E-value=1.8e-09 Score=90.81 Aligned_cols=74 Identities=12% Similarity=0.197 Sum_probs=63.1
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|+|+|.|.+...|+||+|++... ..+.||....++|+++.||.|
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~~---------------------------~~~~pG~t~~~~f~~~~~G~y 91 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGVQ---------------------------EVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGTEE---------------------------EEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEeCCCCceeeeecccccc---------------------------cccCCcceEEEEEEeccceEE
Confidence 46889999999999999888899999997542 256789999999999999999
Q ss_pred EEeeccccceeccceEEEEEec
Q 007633 514 NLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~ 535 (595)
.||||+..|+ .||...+.|.+
T Consensus 92 ~y~C~~~~~~-~~M~G~i~V~e 112 (112)
T d1ibya_ 92 TIWCQLHPKN-IHLPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTT-TBCCEEEEEEC
T ss_pred EEECcccChh-hcCeEEEEEEC
Confidence 9999995443 67999998864
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=2.1e-09 Score=97.90 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=73.0
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee---eeeeeEEEE
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV---QQNYTNMDI 270 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~l~i 270 (595)
+.++|||+.+. .+.+.++++.|+++||||+|.+....|+||||||.|+|++.+|.... +...|++.+
T Consensus 71 ~~~tING~~f~----------~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v 140 (181)
T d1kv7a3 71 HANKINGQAFD----------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKV 140 (181)
T ss_dssp GCEEETTBCCC----------TTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEE
T ss_pred cceeECCEecC----------CCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEe
Confidence 56899999972 23477999999999999999987668999999999999999998774 456799999
Q ss_pred eccceEEEEEEeC--CC-CCcceEEEEeec
Q 007633 271 HVGQSFSFLVTTD--QN-ASSDYYIVASPR 297 (595)
Q Consensus 271 ~pGqR~dvlv~~~--~~-~g~~y~i~a~~~ 297 (595)
.+|+. .++|++. .+ +| .|.++++..
T Consensus 141 ~~~~~-~v~v~f~~~~~~~G-~w~fHCHil 168 (181)
T d1kv7a3 141 EGNVS-EVLVKFNHDAPKEH-AYMAHCHLL 168 (181)
T ss_dssp SSSEE-EEEECCCSCCCGGG-CEEEEESSH
T ss_pred CCCce-EEEEEEEeeCCCCC-eEEEeCChH
Confidence 77653 4455443 22 35 899998764
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.82 E-value=3.4e-09 Score=92.86 Aligned_cols=98 Identities=7% Similarity=-0.149 Sum_probs=68.4
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEE----E---eCCccCCCCCCCCC-CCCCCcccEEEeCCCcEEEEEE
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVG----M---DFGVWTENSRGTYN-KWDGVARSTTQVFPGAWTAILV 505 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~----~---g~G~~~~~~~~~~n-~~~p~~rDTv~v~p~g~~~irf 505 (595)
.++++.|+.|+|+|.|.+...|+.+++...+.... . ..+.... ..+. -......+|..+.|+....|+|
T Consensus 33 ~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~v~~~t~~~~pg~s~~i~f 109 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL---FVPPPDTPNALAWTAMLNAGESGSVTF 109 (139)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT---TCCCTTCTTEEEECCCBCTTEEEEEEE
T ss_pred eEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhc---cccCCCcccccccccccCCcceEEEEE
Confidence 46889999999999999877655554332221000 0 0010000 0011 1123456788899999999999
Q ss_pred EecCcceeEEeeccccceeccceEEEEEe
Q 007633 506 YLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 506 ~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+++.||.|.||||+..|+..||...+.|.
T Consensus 110 ~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 110 RTPAPGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp ECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ecCCCeEEEEEcCCcCcccccCeEEEEEc
Confidence 99999999999999999999999999886
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.79 E-value=7.3e-09 Score=89.18 Aligned_cols=90 Identities=17% Similarity=0.132 Sum_probs=67.1
Q ss_pred EEecCCCcEEEEEEEcCCC-----ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-
Q 007633 434 LINGTYKGFMEIIFQNNDT-----TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL- 507 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~-----~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a- 507 (595)
.+.++.|+.|++.+.|..+ ..|.+|+||... .+..... .+..-....|.||+....+|++
T Consensus 35 tI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~------~~~~~~d--------~~~~~s~~~i~PG~s~~Y~~~~~ 100 (130)
T d1gyca1 35 LITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQ------AGTNWAD--------GPAFVNQCPIASGHSFLYDFHVP 100 (130)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCC------TTCGGGS--------CCBTTTBCCBCTTEEEEEEEECS
T ss_pred eEEEECCeEEEEEEEecCCCcccCCceeEEeccccc------cccCCCC--------CccccccCCCCCCCeEEEEEECC
Confidence 4678899999999999754 357889999665 1111000 0111112247899999999997
Q ss_pred cCcceeEEeeccccceeccceEEEEEecCC
Q 007633 508 DNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 508 dNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
+.+|.|.||||...|...||...+.|.+|+
T Consensus 101 ~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 101 DQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp SCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 579999999999999999999999998874
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.75 E-value=8.5e-09 Score=88.80 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=67.2
Q ss_pred EEecCCCcEEEEEEEcCCC-----ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEE-e
Q 007633 434 LINGTYKGFMEIIFQNNDT-----TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVY-L 507 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~-----~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~-a 507 (595)
++.++.|+.++|.+.|..+ ..|++|+||-++. ...+.+. ...-....|+||+....+|. +
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~-----~~~~~dg---------v~g~~~~~I~PG~~~~y~~~~~ 100 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQR-----GTNWADG---------ADGVNQCPISPGHAFLYKFTPA 100 (131)
T ss_dssp EEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCT-----TCGGGSC---------CBTTTBCCBCTTCEEEEEECCT
T ss_pred eEEEECCCEEEEEEEECCCCccccccceEEeCCcccC-----CCCCCCC---------CcccccceECCCCeEEEEEeCC
Confidence 4678999999999999654 3589999996541 1111111 00011235789999999998 5
Q ss_pred cCcceeEEeeccccceeccceEEEEEecCC
Q 007633 508 DNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 508 dNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
+.+|.|.||||...|...||...+.|.+++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 101 GHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 789999999999999999999999998765
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.73 E-value=5.1e-08 Score=85.98 Aligned_cols=142 Identities=15% Similarity=0.033 Sum_probs=107.1
Q ss_pred CCCCceeEeeeccccccH------------HHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 160 VPDGDITIFISDWYTKSH------------KKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~------------~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
.+|++++++-+|+|...+ ......++. .....|+.+.+||+.... ...-.++.+.||+
T Consensus 10 ~yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~-m~~l~PthVVFNG~vgal---------tg~~aL~AkvGEt 79 (178)
T d1mzya2 10 RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGAL---------TGEGALKAKVGDN 79 (178)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTT---------SGGGCEEEETTCE
T ss_pred ccCeEEEEecceeecCCCCCCCccccCChhhcchhHHHH-HHccCCCEEEECCccCcc---------cCCCCcccccCCe
Confidence 449999999999996211 111111111 112458999999988622 1124699999998
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEeecCcceee--eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCC
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ--QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWN 305 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p--~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~ 305 (595)
| ||+|++.++.-+||+-|..+..+-.+|.+..+ ..++++.|.+|+..-+++++++ || .|.++.+.....-
T Consensus 80 V--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~-PG-~Y~~VdH~l~~A~---- 151 (178)
T d1mzya2 80 V--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAV---- 151 (178)
T ss_dssp E--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----
T ss_pred E--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC-Ce-EEEEEccHHHHHH----
Confidence 7 67999999999999999999999999998864 5679999999999999999995 78 9999998754321
Q ss_pred CcceEEEEEecCCC
Q 007633 306 KVTGVAILHYSNSL 319 (595)
Q Consensus 306 ~~~~~ail~y~~~~ 319 (595)
.....|+|...+..
T Consensus 152 ~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 152 HKGATAHVLVEGEW 165 (178)
T ss_dssp TTCCEEEEEEESCC
T ss_pred hCCCeEEEEeCCCC
Confidence 14578999987654
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.70 E-value=4.4e-08 Score=86.91 Aligned_cols=100 Identities=12% Similarity=0.003 Sum_probs=77.4
Q ss_pred EEEEEEcCCCC-CC-eEEeecCCEEEEEEEECCCCCceeeeCCccCCCC---------------CCCCCCC--------C
Q 007633 50 QQVIGINGQFP-GP-ILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN---------------SWQDGVL--------G 104 (595)
Q Consensus 50 ~~~~~~Ng~~P-gP-~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~---------------~~~DGv~--------~ 104 (595)
+.+|++||+.= -| +..++.|++.+-++.|....++.+|.||.+..-- ...+|.. +
T Consensus 27 ~~~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (154)
T d1gska3 27 RPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 106 (154)
T ss_dssp CEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred CceEEECCcCcCCCcccccCCCCEEEEEEEeCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCc
Confidence 45799999743 33 4678999999999999999999999999866310 0001110 0
Q ss_pred --CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 105 --TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 105 --tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
....|+||+..+.+|+..+.+|.|.||||.-.|...||.+.+-|-
T Consensus 107 ~kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 107 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred ccccEEeCCCCEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 113489999999999865789999999999999999999999875
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=5.7e-09 Score=96.21 Aligned_cols=98 Identities=10% Similarity=0.074 Sum_probs=72.3
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec----
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD---- 508 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad---- 508 (595)
++|.++.|+.|.|.|.|.....|++|.||..+.....+....+ ........+..|+||+..+.+|.+.
T Consensus 76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~d--------g~~~~~~~~~~v~PG~t~tY~~~~~~~~~ 147 (192)
T d2j5wa1 76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPD--------NTTDFQRADDKVYPGEQYTYMLLATEEQS 147 (192)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCC--------CCCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCC--------CCCCCCcccCcccCCCEEEEEEEccCccc
Confidence 4678999999999999998899999999998743222111000 0111223444689999999999985
Q ss_pred ------CcceeEEeecccc--ceeccceEEEEEecCCC
Q 007633 509 ------NAGIWNLRAENLD--TWYLGQEVYVNVINPEI 538 (595)
Q Consensus 509 ------NPG~W~~HCHil~--H~~~GM~~~~~V~~~~~ 538 (595)
++|+|+||||+.. |...||+..+.|..+..
T Consensus 148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 3579999999744 77889999999976653
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=1.6e-08 Score=88.20 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=67.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCc-c
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNA-G 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNP-G 511 (595)
+++.++.|+.|++.+.|.....|++|+||.+. -...+|. + . ..++||+....+|.+++| |
T Consensus 46 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~-------------~--~--~~i~pg~~~~y~~~~~~~aG 106 (140)
T d1kv7a1 46 PAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDGG-------------P--Q--GIIPPGGKRSVTLNVDQPAA 106 (140)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------T--T--CCBCTTCEEEEEEECCSCSE
T ss_pred ceEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCCC-------------c--c--ceEccCCceeEEEEEecCCe
Confidence 35788999999999999999999999999753 1111110 0 1 137899999999999886 9
Q ss_pred eeEEeecc----ccceeccceEEEEEecCCC
Q 007633 512 IWNLRAEN----LDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 512 ~W~~HCHi----l~H~~~GM~~~~~V~~~~~ 538 (595)
.|.||||. ..|..+||...+.|.++|.
T Consensus 107 t~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 107 TCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp EEEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred eEEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 99999996 3577899999999987653
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.63 E-value=4.5e-08 Score=90.15 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=66.6
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CC-------CccCCC-CeEEEEEEECCceeeeEEc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TN-------CPIPAG-WNWTYQFQVKDQIGSFFYF 131 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq-------~~I~PG-~~~~Y~f~~~~~~Gt~wYH 131 (595)
+.++.+..++.++|++.|. ..+.+|.||.+..--...++... .. ..|+|| +...++|.+ +.+|.|.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~~--~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~H 147 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 147 (190)
T ss_dssp TTEEEECTTCEEEEEEECC--BSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred ceeEEccCccEEEEEeccC--ccccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEEe
Confidence 3468899999999988884 57899999997742211122111 11 237776 466799999 789999999
Q ss_pred cCcchhhhcCceeeEEEecc
Q 007633 132 PSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 132 ~H~~~q~~~Gl~G~liV~~~ 151 (595)
||...|...||...|++.+.
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 99999999999999998764
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.63 E-value=7.6e-08 Score=89.10 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=68.8
Q ss_pred CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCC-------C--CCCcc-CCCCeEEEEEEECCceeeeE
Q 007633 61 GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVL-------G--TNCPI-PAGWNWTYQFQVKDQIGSFF 129 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~-------~--tq~~I-~PG~~~~Y~f~~~~~~Gt~w 129 (595)
+.+|+++.|+.+++.+.|... ..+.+|.||.+..--. .+|.. . ...-| ++|+....+|.+ +.+|.|.
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~-~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~a-dnpG~w~ 146 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPWF 146 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEEC-CSCEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEEe-ccCCCCCccccCcccceEEeCCCCEEEEEEEEC-CCCeeeE
Confidence 457999999999999988875 6899999998763211 12211 1 11336 467888899999 7899999
Q ss_pred EccCcchhhhcCceeeEEEecc
Q 007633 130 YFPSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 130 YH~H~~~q~~~Gl~G~liV~~~ 151 (595)
||||...|...||...|++.+.
T Consensus 147 ~HCHi~~H~~~GM~~~~~~~~~ 168 (200)
T d1hfua3 147 FHCHIEFHLMNGLAIVFAEDMA 168 (200)
T ss_dssp EEESSHHHHHTTCEEEEEECHH
T ss_pred EEeCCChHHhCCCcEEEEEcCC
Confidence 9999999999999988887754
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.61 E-value=2.5e-08 Score=93.30 Aligned_cols=90 Identities=14% Similarity=0.020 Sum_probs=70.2
Q ss_pred eEEeecCCEEEEEEEECC------CCCceeeeCCccCCCCCCCCCC-------------CC--CCCccCCCCeEEEEEEE
Q 007633 63 ILNVTTNWNVVVNVKNDL------DEPLLLTWNGVQHRKNSWQDGV-------------LG--TNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 63 ~I~v~~Gd~v~v~v~N~l------~~~~~iH~HG~~~~~~~~~DGv-------------~~--tq~~I~PG~~~~Y~f~~ 121 (595)
+++++.|++|+|.+.|.- .+.+.+|.||.+...-...+|. +. ....|+||+..+.+|++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 589999999999999953 4679999999876311111111 11 12448899999999999
Q ss_pred CCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 122 KDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 122 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
|.+|.|.||||...|...||...|+|.+.+.
T Consensus 160 -dnpG~w~~HCH~~~H~~~GM~~~~~v~~~~~ 190 (214)
T d1aoza3 160 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVEKV 190 (214)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGGGC
T ss_pred -CCCeeEEEEECcHHHHhCcCcEEEEEccccc
Confidence 7899999999999999999999998876543
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.55 E-value=3.5e-08 Score=80.63 Aligned_cols=81 Identities=17% Similarity=0.259 Sum_probs=53.5
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
.+|++++||+| ++.|.....+.++.+..........++....+....||.++++ +. +.+|+|||+|.. |...|
T Consensus 18 ~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--tf-~~~G~y~y~C~~--H~~~G 90 (98)
T d2plta_ 18 KTLTIKSGETV--NFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSV--KL-TAAGEYGYYCEP--HQGAG 90 (98)
T ss_dssp SEEEECTTCEE--EEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEE--EC-CSCEEEEEECGG--GGGGT
T ss_pred CEEEECCCCEE--EEEECCCCceeEEEecCCccccccCCcccccccccCCCceEEE--Ee-cCCceEEEEeCc--CCCCC
Confidence 69999999985 5678877777777765533221111111111122345555554 44 579999999964 88889
Q ss_pred ceeeEEEe
Q 007633 142 GYGGIIIN 149 (595)
Q Consensus 142 l~G~liV~ 149 (595)
|.|.|+|+
T Consensus 91 M~G~I~Ve 98 (98)
T d2plta_ 91 MVGKIIVQ 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999996
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.51 E-value=1.8e-07 Score=86.54 Aligned_cols=90 Identities=19% Similarity=0.182 Sum_probs=68.8
Q ss_pred CCeEEeecCCEEEEEEEECC---CCCceeeeCCccCCCCCCCCCCCC-CC----------CccCCCCeEEEEEEECCcee
Q 007633 61 GPILNVTTNWNVVVNVKNDL---DEPLLLTWNGVQHRKNSWQDGVLG-TN----------CPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~-tq----------~~I~PG~~~~Y~f~~~~~~G 126 (595)
|.++.+..|+++++.+.|.. ...+.+|.||.+..--...+|... .. ..++||+...++|.+ |.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 44678999999999998864 356999999998642222233221 11 234799999999999 7899
Q ss_pred eeEEccCcchhhhcCceeeEEEecc
Q 007633 127 SFFYFPSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 127 t~wYH~H~~~q~~~Gl~G~liV~~~ 151 (595)
.|.||||...|...||...|++.+.
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~~ 172 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDVA 172 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETHH
T ss_pred eEEEEcCchhhHhccCcEEEEEcCC
Confidence 9999999999999999998766653
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.47 E-value=2.3e-07 Score=80.10 Aligned_cols=91 Identities=16% Similarity=0.156 Sum_probs=66.9
Q ss_pred EEecCCCcEEEEEEEcCCC-----ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-
Q 007633 434 LINGTYKGFMEIIFQNNDT-----TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL- 507 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~-----~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a- 507 (595)
++.++.|+.++|.+.|..+ ..+.+|+||-+. .+....+ ....-....|+||+....+|.+
T Consensus 35 ~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~------~~~~~~d--------gv~~~t~~~I~PG~~~~Y~~~~~ 100 (136)
T d1v10a1 35 LITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQ------AGTTEMD--------GPAFVNQCPIIPNESFVYDFVVP 100 (136)
T ss_dssp CEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCC------TTCGGGS--------CCBTTTBCCBCTTEEEEEEEECT
T ss_pred eEEEECCcEEEEEEEeCCCCcccCcceeEEeccccc------ccccccC--------CCCccccceECCCCeEEEEEECC
Confidence 4678899999999999743 457899999542 1110000 0011112347899999999998
Q ss_pred cCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 508 DNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 508 dNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+.+|.|.||||...|...||...+.|.++++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 101 GQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred CCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 5699999999999999999999999987764
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.40 E-value=5e-08 Score=80.74 Aligned_cols=87 Identities=17% Similarity=0.200 Sum_probs=60.7
Q ss_pred CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC--C-CCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 59 FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL--G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 59 ~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
|--..|+|+.||+|+ +.|....++.++......... ..++.. . ....+.||+++.+.|.+++.+|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~- 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGA-SKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP- 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEECSSCCEEEEECGGGSGGG-CHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST-
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceeEeecCccccc-ccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC-
Confidence 334689999999865 678766666666554321100 000000 1 224578999999999988789999999975
Q ss_pred hhhhcCceeeEEEec
Q 007633 136 FQRAAGGYGGIIINN 150 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~ 150 (595)
|...||.|.|+|+.
T Consensus 92 -H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 92 -HRGAGMVGKITVEG 105 (105)
T ss_dssp -TGGGTCEEEEEECC
T ss_pred -CCCCCCEEEEEEcC
Confidence 88889999999973
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.39 E-value=2.1e-07 Score=79.97 Aligned_cols=77 Identities=12% Similarity=0.001 Sum_probs=59.6
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|.|.|.+...|..|-| .|-+ + +--..+.||....++|++++||.|
T Consensus 53 ~i~V~~Gd~V~~~ltN~d~~~~v~H~~----~i~~-------------~-------~~~~~~~PG~~~~~~F~a~~~G~y 108 (132)
T d1fwxa1 53 SFTVKEGDEVTVIVTNLDEIDDLTHGF----TMGN-------------Y-------GVAMEIGPQMTSSVTFVAANPGVY 108 (132)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEE----EETT-------------T-------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcCCCEEEEEEEcCCCCccceEee----chhh-------------h-------ccccccCCCEEEEEEEeCCCCeEE
Confidence 467899999999999988766665443 2211 1 122367899999999999999999
Q ss_pred EEeeccccce-eccceEEEEEe
Q 007633 514 NLRAENLDTW-YLGQEVYVNVI 534 (595)
Q Consensus 514 ~~HCHil~H~-~~GM~~~~~V~ 534 (595)
.||||..-|. |.||...+.|.
T Consensus 109 ~~~C~~~cg~~H~~M~G~iiVe 130 (132)
T d1fwxa1 109 WYYCQWFCHALHMEMRGRMLVE 130 (132)
T ss_dssp EEECCSCCSTTCTTCEEEEEEE
T ss_pred EEECccccCcchhcCEEEEEEE
Confidence 9999987665 68999988775
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.34 E-value=4.6e-07 Score=82.00 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=68.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec----
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD---- 508 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad---- 508 (595)
++|.++.|+.|.+.|.|.....+++|.||..+-....+. .+... ..+.-.....|+||+..+.+|.++
T Consensus 60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~-~~~d~-------~~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGA-SYSDH-------TLPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCC-CSCCC-------CCHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCcEEeeEEEeCCCCCccccccccccccccccc-ccccc-------CCCCCccccccCCCCEEEEEEEeCCccc
Confidence 478899999999999999888899999998763211100 00000 000000011478999999999985
Q ss_pred ------CcceeEEeecccc--ceeccceEEEEEecCCC
Q 007633 509 ------NAGIWNLRAENLD--TWYLGQEVYVNVINPEI 538 (595)
Q Consensus 509 ------NPG~W~~HCHil~--H~~~GM~~~~~V~~~~~ 538 (595)
+.|.|+||||+.. |...||...+.|..+..
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~ 169 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGT 169 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTC
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCCC
Confidence 2489999999755 56779999999887654
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.32 E-value=1.6e-07 Score=76.62 Aligned_cols=78 Identities=18% Similarity=0.282 Sum_probs=53.6
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC--C-CCCccCCCCeEEEEEEECCceeeeEEccCcchh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL--G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ 137 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 137 (595)
-+.|++++||+|+ +.|.-..++++..+..... .|... . ....+.||++++|.| +.+|+|+|||.. |
T Consensus 18 P~~i~v~~GdtV~--~~n~~~~~H~~~~~~~~~~----~~~~~~~~~~~~~~~~g~t~~~tf---~~~G~y~Y~C~~--H 86 (98)
T d1pcsa_ 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVP----ADTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCEP--H 86 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSC----HHHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGG--G
T ss_pred CCEEEECCCCEEE--EeECCCCccceEEeccccC----CCccccccccccccCCCcEEEEec---cCCceEEEEecc--C
Confidence 4699999999855 5577666666655432110 01000 1 123467899888877 469999999954 8
Q ss_pred hhcCceeeEEEe
Q 007633 138 RAAGGYGGIIIN 149 (595)
Q Consensus 138 ~~~Gl~G~liV~ 149 (595)
...||.|.|+|+
T Consensus 87 ~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 87 RGAGMVGKVVVE 98 (98)
T ss_dssp TTTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 888999999995
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.32 E-value=4.4e-07 Score=73.99 Aligned_cols=82 Identities=12% Similarity=0.170 Sum_probs=52.8
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-C-CCCccCCCCeEEEEEEECCceeeeEEccCcchhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR 138 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 138 (595)
-..|++++||+| ++.|....++.+.+............... . ......|++++++.| +.+|+|||+|-. |.
T Consensus 16 P~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~y~C~~--H~ 88 (99)
T d1bypa_ 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP--HA 88 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG--GT
T ss_pred CCEEEECCCCEE--EEEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEe---cCCceEEEEECc--CC
Confidence 368999999985 56787666666554443221110000000 1 223456777777766 469999999964 88
Q ss_pred hcCceeeEEEe
Q 007633 139 AAGGYGGIIIN 149 (595)
Q Consensus 139 ~~Gl~G~liV~ 149 (595)
..||.|.|+|.
T Consensus 89 ~~GM~G~I~V~ 99 (99)
T d1bypa_ 89 GAGMVGKVTVN 99 (99)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 88999999984
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.32 E-value=6.7e-07 Score=72.87 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCC-CCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNS-WQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR 138 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~-~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 138 (595)
-.+|.+++||+|+ +.|....++++.+......... ..++-.. ......||++|++.| +++|+|.|+|- .|.
T Consensus 16 P~~iti~~GdtV~--f~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF---~~~G~y~Y~C~--pH~ 88 (99)
T d1plca_ 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCS--PHQ 88 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECG--GGT
T ss_pred CCEEEECCCCEEE--EEECCCCCccEEEccCcCCCccccccCcccccccccCCCceEEEec---CCCceEEEEeC--CCc
Confidence 3689999999864 6787666777665543221100 0000001 234467999888877 46999999994 588
Q ss_pred hcCceeeEEEe
Q 007633 139 AAGGYGGIIIN 149 (595)
Q Consensus 139 ~~Gl~G~liV~ 149 (595)
..||.|.|+|.
T Consensus 89 ~~GM~G~I~V~ 99 (99)
T d1plca_ 89 GAGMVGKVTVN 99 (99)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 89999999984
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=98.28 E-value=4.9e-07 Score=73.58 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=51.7
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-.+|++++||+|+ +.|....++......-........++.........|++++++.| +.+|+|||+|-. |...
T Consensus 17 P~~i~i~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~G~y~y~C~~--H~~~ 89 (98)
T d1iuza_ 17 PSKISVAAGEAIE--FVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP--HAGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEE--EEECCCCcccEEEeCCCcccccccccccccCcccCCCcEEEEec---CCCceEEEEeCC--CccC
Confidence 3589999999865 56776656554443321111000000000123456777777665 469999999974 8888
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 90 GM~G~I~Ve 98 (98)
T d1iuza_ 90 GMKMTITVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999996
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.25 E-value=1.3e-06 Score=81.55 Aligned_cols=88 Identities=14% Similarity=0.151 Sum_probs=62.1
Q ss_pred eEEeecCCEEEEEEEEC-----CCCCceeeeCCccCCCCCCCCCC-----------------------CC--CCCccCCC
Q 007633 63 ILNVTTNWNVVVNVKND-----LDEPLLLTWNGVQHRKNSWQDGV-----------------------LG--TNCPIPAG 112 (595)
Q Consensus 63 ~I~v~~Gd~v~v~v~N~-----l~~~~~iH~HG~~~~~~~~~DGv-----------------------~~--tq~~I~PG 112 (595)
.+++...+.+++.+.+. ...++.+|.||.+..--....|. |. ....++||
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~ 141 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 141 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCC
Confidence 45666666665555433 23579999999986411111111 11 11347899
Q ss_pred CeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEecc
Q 007633 113 WNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNR 151 (595)
Q Consensus 113 ~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 151 (595)
+..+.+|++ |.+|.|.+|||...|...||.-.++.++.
T Consensus 142 g~~~ir~~a-dnpG~Wl~HCHi~~H~~~GM~~~~~~~p~ 179 (216)
T d2q9oa3 142 GWLLLAFRT-DNPGAWLFHCHIAWHVSGGLSVDFLERPA 179 (216)
T ss_dssp SEEEEEEEC-CSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEEC-CCCeEEEEEccCCcccccCCeEEEEEcch
Confidence 999999999 78999999999999999999988866653
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.25 E-value=9e-07 Score=70.85 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=54.6
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|+ +.|.....+.+...+... ..+.+ ..+.||++++|.| +.+|+|.|+|.. |...
T Consensus 18 P~~i~I~~GdtV~--f~n~d~~~h~~~~~~~~~--~~~~~------~~~~~g~~~~~tF---~~~G~y~Y~C~~--H~~~ 82 (91)
T d1bxua_ 18 PSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQPE--LSHKD------LAFSPGETFEATF---SEPGTYTYYCEP--HRGA 82 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEETTCGG--GCEEE------EECSTTCEEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEE--EEECCcCCceEEeccccc--ccccc------cccCCCCCEEEEe---ccCceEEEEeCC--CCCC
Confidence 4799999999865 778877777666555421 11111 3467899888877 469999999965 7777
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 83 gM~G~I~Ve 91 (91)
T d1bxua_ 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999985
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.24 E-value=1.5e-07 Score=77.26 Aligned_cols=84 Identities=7% Similarity=0.043 Sum_probs=47.5
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCC---CCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSW---QDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ 137 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~---~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 137 (595)
-++|++++||+|+ +.|.-..++.+.+.-........ .+........+.++...+|.|+. +++|+|+|+|.. |
T Consensus 16 P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-~~~G~y~Y~C~~--H 90 (102)
T d1kdja_ 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV-STPGTYTFYCTP--H 90 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC-CSCEEEEEECST--T
T ss_pred CCEEEECCCCEEE--EEECCCCceeEEEecCCCCCcccccccccCcccccccccCCccEEEEee-CCCceEEEEecC--C
Confidence 3699999999865 66775555443322110000000 00000111222333334444444 579999999985 8
Q ss_pred hhcCceeeEEEe
Q 007633 138 RAAGGYGGIIIN 149 (595)
Q Consensus 138 ~~~Gl~G~liV~ 149 (595)
.+.||.|.|+|+
T Consensus 91 ~~~GM~G~I~Ve 102 (102)
T d1kdja_ 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 889999999995
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.12 E-value=4.4e-06 Score=68.62 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=55.0
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCcch
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF 136 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 136 (595)
+|--++|.+++||+|. +.|+-..++++++..- .+|... ....+.||++++|.| +++|+|.|+|...
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~d~~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf---~~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceeEEEecc-------cCCcccccccccCCCceEEEEe---cCCeEEEEEecCC-
Confidence 4555799999999865 6788777777765432 111112 334578999988888 4699999999642
Q ss_pred hhhcCceeeEEEe
Q 007633 137 QRAAGGYGGIIIN 149 (595)
Q Consensus 137 q~~~Gl~G~liV~ 149 (595)
.||.|.|+|+
T Consensus 96 ---~~M~G~I~Ve 105 (105)
T d2ov0a1 96 ---PFMRGKVVVE 105 (105)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCCEEEEEEC
Confidence 4899999985
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.12 E-value=5.9e-06 Score=70.52 Aligned_cols=75 Identities=8% Similarity=-0.006 Sum_probs=59.9
Q ss_pred EEecCCCcEEEEEEEcCC---CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCc
Q 007633 434 LINGTYKGFMEIIFQNND---TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNA 510 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNP 510 (595)
.+.++.|+.|.+.+.|.. +..|.|++.+..+. ..+.||....+.|++++|
T Consensus 52 ~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~~~ 104 (131)
T d1qnia1 52 DFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAGKP 104 (131)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSS
T ss_pred eEEecCCCEEEEEEEccCCCCcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcCCC
Confidence 467899999999999964 34577777665542 246789999999999999
Q ss_pred ceeEEeeccccce-eccceEEEEEec
Q 007633 511 GIWNLRAENLDTW-YLGQEVYVNVIN 535 (595)
Q Consensus 511 G~W~~HCHil~H~-~~GM~~~~~V~~ 535 (595)
|.|.+||+..-|. |.+|...+.|..
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999986665 678999888764
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=98.12 E-value=7e-07 Score=73.58 Aligned_cols=79 Identities=15% Similarity=0.226 Sum_probs=56.5
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC------C-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL------G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~------~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
..|++++||+|+ +.|.....+......... .++.. . ......|++++++.|.++.++|+|||+|-.
T Consensus 19 ~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T d2cj3a1 19 AKLTIKPGDTVE--FLNNKVPPHNVVFDAALN-----PAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 91 (105)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECSSSS-----TTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CEEEECCCCEEE--EEECCCCceeeEeccCCC-----CccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeCC
Confidence 599999999855 677766555544432211 11110 1 123467999999999987789999999974
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
|..+||.|.|+|+
T Consensus 92 --H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 92 --HRGAGMVGKITVA 104 (105)
T ss_dssp --TGGGTCEEEEEEC
T ss_pred --CcCCCcEEEEEEe
Confidence 8889999999996
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=98.11 E-value=2.5e-06 Score=72.22 Aligned_cols=76 Identities=12% Similarity=0.146 Sum_probs=50.4
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
++|.+++||+|+. .|.-...+..-.++. ..++. ......+|++++|.| +.+|+|.|+|.. |...|
T Consensus 21 ~~ltV~~GDTV~f--~n~d~~~h~~~~~~~------~~~~~--~~~~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~G 85 (123)
T d1pmya_ 21 ALVRLKPGDSIKF--LPTDKGHNVETIKGM------APDGA--DYVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSSSCCCEECTTS------SCTTC--CCCBCCTTSCEEEEC---CSCEEEEEECST--TTTTT
T ss_pred CEEEECCCCEEEE--eeCCCCccccccccc------Ccccc--ccccccccccccccc---CCCceEEEEecc--CCCCC
Confidence 8999999999654 555332222211221 12222 124456778877776 569999999975 88899
Q ss_pred ceeeEEEeccC
Q 007633 142 GYGGIIINNRD 152 (595)
Q Consensus 142 l~G~liV~~~~ 152 (595)
|.|.|+|.++.
T Consensus 86 M~G~I~Vgd~~ 96 (123)
T d1pmya_ 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEECCCC
Confidence 99999997643
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=3.4e-06 Score=77.83 Aligned_cols=102 Identities=13% Similarity=0.009 Sum_probs=68.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc-
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG- 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG- 511 (595)
++|.++.|+.|.|.|.|.....+++|.||..+.-- ..|.+-....... ..+.......|.||+....+|.+...+
T Consensus 86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~--~dg~~~~~~~~~~--~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKN--NEGTYYSPNYNPQ--SRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGG--GCSBCCBCC---------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred ceEEEECCCEEEEEEEECCCCCccccccccccCcc--cccccccCCCCcc--cCCcCcccceecCCCEEEEEEEecCCCC
Confidence 46889999999999999988899999999987321 1121110000000 000111112478999999999985443
Q ss_pred ---------eeEEeeccccce--eccceEEEEEecCCC
Q 007633 512 ---------IWNLRAENLDTW--YLGQEVYVNVINPEI 538 (595)
Q Consensus 512 ---------~W~~HCHil~H~--~~GM~~~~~V~~~~~ 538 (595)
+|+||||+.... ..||...+.|..+..
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 899999985544 669999999987654
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=98.01 E-value=1.2e-05 Score=67.81 Aligned_cols=76 Identities=5% Similarity=-0.074 Sum_probs=50.1
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|++++||+|+. .|.-...+....++. ...+. ......++++|+|.| +.+|+|.|+|-. |...|
T Consensus 21 ~~itI~~GdtV~f--~n~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~G 85 (123)
T d1adwa_ 21 AFVRAEPGDVINF--VPTDKSHNVEAIKEI-----LPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTP--HFGMG 85 (123)
T ss_dssp SEEEECTTEEEEE--EESSSSCCCEECTTS-----CCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGG--GGGGT
T ss_pred CEEEECCCCEEEE--EeCCCCcceecccCc-----ccccc---ccccccCCcceEEec---cCCCeEEEEEcc--CCCCC
Confidence 6999999999665 455333222221221 11111 224456777777777 469999999965 78889
Q ss_pred ceeeEEEeccC
Q 007633 142 GYGGIIINNRD 152 (595)
Q Consensus 142 l~G~liV~~~~ 152 (595)
|.|.|+|.++.
T Consensus 86 M~G~I~Vg~~~ 96 (123)
T d1adwa_ 86 MVGLVQVGDAP 96 (123)
T ss_dssp CEEEEEESSSC
T ss_pred CEEEEEECCCC
Confidence 99999997643
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=98.01 E-value=6.1e-06 Score=70.27 Aligned_cols=90 Identities=13% Similarity=0.055 Sum_probs=63.3
Q ss_pred CCCCeEEe-ecCCEEEEEEEECCCCCceeeeCCccC--------------------C-CCCCCCCCCCCCCccCCCCeEE
Q 007633 59 FPGPILNV-TTNWNVVVNVKNDLDEPLLLTWNGVQH--------------------R-KNSWQDGVLGTNCPIPAGWNWT 116 (595)
Q Consensus 59 ~PgP~I~v-~~Gd~v~v~v~N~l~~~~~iH~HG~~~--------------------~-~~~~~DGv~~tq~~I~PG~~~~ 116 (595)
|---+|.| +.|++|+|+|+|....++.+-.|-+.. . ..+..+.+......|.||++.+
T Consensus 15 f~~~~i~V~k~G~~V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~ 94 (129)
T d2ccwa1 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred CccceEEEecCCCEEEEEEEcCCcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceEE
Confidence 44568998 689999999999977653332232211 0 0011111111235589999999
Q ss_pred EEEEEC--CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 117 YQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 117 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
..|+++ .++|+|+|-|-...|. .||.|.|.|.
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 95 VTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 999997 4799999999988886 7999999984
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.00 E-value=7e-06 Score=69.72 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=65.9
Q ss_pred CCCCeEEe-ecCCEEEEEEEECCCCCceeeeCCc--c-------------------CCCCCCCCCCCCCCCccCCCCeEE
Q 007633 59 FPGPILNV-TTNWNVVVNVKNDLDEPLLLTWNGV--Q-------------------HRKNSWQDGVLGTNCPIPAGWNWT 116 (595)
Q Consensus 59 ~PgP~I~v-~~Gd~v~v~v~N~l~~~~~iH~HG~--~-------------------~~~~~~~DGv~~tq~~I~PG~~~~ 116 (595)
|=-..|.| +.|++|+|+|+|....++.+=.|-. . ....+.++.+......|.||++.+
T Consensus 15 Fd~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~ 94 (128)
T d1jzga_ 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred CccceEEEecCCCEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEE
Confidence 44468999 5899999999999876654433321 0 001123333333335689999999
Q ss_pred EEEEEC--CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 117 YQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 117 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
..|+++ +++|+|=|-|-.-.|. .||.|.|+|+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 95 VTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 999997 5799999999988888 7999999985
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.94 E-value=2e-05 Score=65.95 Aligned_cols=77 Identities=10% Similarity=0.008 Sum_probs=50.1
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+| ++.|.. .++.++.-. ..+.+|.. ...-.+++++++.| +.+|+|.|+|.. |...
T Consensus 20 P~~itI~~GDTV--~f~n~~-~~Hnv~~~~-----~~~~~~~~--~~~~~~~~~~s~tF---~~~G~y~Y~Ctp--H~~~ 84 (120)
T d1paza_ 20 PAYIKANPGDTV--TFIPVD-KGHNVESIK-----DMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCTP--HYAM 84 (120)
T ss_dssp SSEEEECTTCEE--EEEESS-SSCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEE--EEeeCC-CcceEeecc-----ccCccccc--ccccccCceEEEEe---cCCCeEEEEEee--CCCC
Confidence 379999999997 455653 233333221 12222222 12334567766666 469999999975 7778
Q ss_pred CceeeEEEeccC
Q 007633 141 GGYGGIIINNRD 152 (595)
Q Consensus 141 Gl~G~liV~~~~ 152 (595)
||.|.|+|.+..
T Consensus 85 GM~G~I~Vg~~~ 96 (120)
T d1paza_ 85 GMIALIAVGDSP 96 (120)
T ss_dssp TCEEEEEESSSC
T ss_pred CCEEEEEECCCC
Confidence 999999998753
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.94 E-value=7.2e-06 Score=69.82 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=64.1
Q ss_pred CCCCeEEeecC-CEEEEEEEECCCCCceeeeCCccC--C-------------------CCCCCCCCCCCCCccCCCCeEE
Q 007633 59 FPGPILNVTTN-WNVVVNVKNDLDEPLLLTWNGVQH--R-------------------KNSWQDGVLGTNCPIPAGWNWT 116 (595)
Q Consensus 59 ~PgP~I~v~~G-d~v~v~v~N~l~~~~~iH~HG~~~--~-------------------~~~~~DGv~~tq~~I~PG~~~~ 116 (595)
|=-..|.|+.| ++|+|+|+|....++.+=-|-+-. . ..+.++.+......|.||++.+
T Consensus 15 fd~~~i~V~aG~e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~ 94 (129)
T d1cuoa_ 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred CcccEEEEeCCCEEEEEEEEeCCcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccce
Confidence 44468999999 799999999987664322222110 0 0011222211235689999999
Q ss_pred EEEEEC--CceeeeEEccCcchhhhcCceeeEEEec
Q 007633 117 YQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 117 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
..|+++ ..+|+|-|-|-...|. .||.|.|+|++
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 95 VKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred EEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 999997 3599999999988886 79999999974
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.91 E-value=5.4e-06 Score=67.01 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=45.6
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC--C-CCCccCCCCeEEEEEEECCceeeeEEccCcchhh
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL--G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR 138 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 138 (595)
.+|++++||+|+.. |.....+...+ ... +...+.+ . ......+++++++.| +.+|+|+|+|-. |.
T Consensus 19 ~~i~V~~GdtV~f~--~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~Y~C~~--H~ 86 (97)
T d2jxma1 19 KALSISAGDTVEFV--MNKVGPHNVIF----DKV-PAGESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTP--HR 86 (97)
T ss_dssp SEEEECTTCEEEEE--ECSSCCCCBEE----EEC-CTTSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSS--TT
T ss_pred CEEEECCCCEEEEE--ECCCcceeEEE----ecC-CCccccccccccccccCcceEEEEec---CCCeEEEEEEcc--CC
Confidence 59999999997654 54333222111 110 0001111 1 123345666666555 479999999954 77
Q ss_pred hcCceeeEEEe
Q 007633 139 AAGGYGGIIIN 149 (595)
Q Consensus 139 ~~Gl~G~liV~ 149 (595)
..||.|.|+|+
T Consensus 87 ~~GM~G~I~Ve 97 (97)
T d2jxma1 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 78999999995
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.86 E-value=1.6e-05 Score=67.09 Aligned_cols=75 Identities=13% Similarity=0.017 Sum_probs=48.9
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
..|++++||+| ++.|... .+..|...- ...+|. ......++++|+|.| +.+|+|.|+|.. |...|
T Consensus 21 ~~itI~~GdTV--~w~n~~~-~~~~~~~~~-----~~p~~~--~~~~~~~~~~~s~Tf---~~~G~Y~Y~C~p--H~~~G 85 (124)
T d1bqka_ 21 ASLKVAPGDTV--TFIPTDK-GHNVETIKG-----MIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HYGMG 85 (124)
T ss_dssp SEEEECTTCEE--EEECSSS-SCCCEECTT-----CSCTTC--CCCBCCTTCCEEEEC---CSCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCeE--EEEECCC-Ccccccccc-----cCCCcc--ccccccCCccEEEec---CCCceEEEEecc--CcCCC
Confidence 68999999995 5556532 222221111 111222 124456778777777 469999999974 77789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 86 M~G~IvVgd~ 95 (124)
T d1bqka_ 86 MVGVVQVGDA 95 (124)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEECCC
Confidence 9999999763
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.83 E-value=1.7e-05 Score=67.25 Aligned_cols=90 Identities=14% Similarity=0.095 Sum_probs=64.3
Q ss_pred CCCCeEEee-cCCEEEEEEEECCCCCceeeeCCc--------------------cCCCCCCCCC-CCCCCCccCCCCeEE
Q 007633 59 FPGPILNVT-TNWNVVVNVKNDLDEPLLLTWNGV--------------------QHRKNSWQDG-VLGTNCPIPAGWNWT 116 (595)
Q Consensus 59 ~PgP~I~v~-~Gd~v~v~v~N~l~~~~~iH~HG~--------------------~~~~~~~~DG-v~~tq~~I~PG~~~~ 116 (595)
|=-.+|.|+ .|++|+|+|+|....++.+=.|-+ .....+.+|. +......|.||++.+
T Consensus 15 fd~~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~ 94 (128)
T d1nwpa_ 15 FNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDS 94 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred CcCCeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCceE
Confidence 434689996 599999999999877655433321 1111111221 111224689999999
Q ss_pred EEEEEC--CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 117 YQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 117 Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
..|+++ .++|+|=|-|-.-.|+ .||.|.|+|+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 95 VTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 999998 4689999999988888 7999999985
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=2.2e-05 Score=70.08 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=62.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCc--
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNA-- 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNP-- 510 (595)
++|.++.|+.|.++|.|.....+.+|.||... .. .... .|.||+..+-+|.+...
T Consensus 86 P~IraevGD~i~V~f~N~a~~p~SiH~HGv~~------~~----------~~~~-------~v~PGet~tY~w~v~~~~g 142 (179)
T d2j5wa4 86 PQLHADVGDKVKIIFKNMATRPYSIHAHGVQT------ES----------STVT-------PTLPGETLTYVWKIPERSG 142 (179)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEESSCBC------SC----------SCCC-------CBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCCEEEEEEEeCCCCCEeEeeccccC------CC----------CCCC-------cccCCccEEEEEEecCccC
Confidence 46889999999999999988899999999863 00 0011 36899999999987433
Q ss_pred --------ceeEEeecccc--ceeccceEEEEEec
Q 007633 511 --------GIWNLRAENLD--TWYLGQEVYVNVIN 535 (595)
Q Consensus 511 --------G~W~~HCHil~--H~~~GM~~~~~V~~ 535 (595)
++|+||||+.. +...||...+.|..
T Consensus 143 p~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc~ 177 (179)
T d2j5wa4 143 AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCR 177 (179)
T ss_dssp CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEEC
T ss_pred CccCCCCceeEEEecCCCcHHHhhCCCeEEEEEEe
Confidence 38999999854 56789999888863
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.80 E-value=3.1e-05 Score=63.42 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=53.3
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
|-.|=-+.|.+++||+| ++.|.-..++.+........ .++ . ....+.||++|+|.| +++|+|.|+|-..
T Consensus 28 ~~~F~P~~i~V~~GdtV--~f~N~d~~~H~v~~~~~~~~----~~~-f-~s~~~~~~~~~~~tf---~~~G~y~y~C~~H 96 (106)
T d1id2a_ 28 KMKYLTPEVTIKAGETV--YWVNGEVMPHNVAFKKGIVG----EDA-F-RGEMMTKDQAYAITF---NEAGSYDYFCTPH 96 (106)
T ss_dssp TTEESSSEEEECTTCEE--EEEECSSSCBCCEECTTTSS----SSC-E-ECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cCEEeCCEEEECCCCEE--EEEECCCCceeEEeccccCC----ccc-c-cccccCCCceEEEec---CCCeEEEEEccCC
Confidence 44565579999999985 57888666666544322111 011 0 123467888888877 4799999999753
Q ss_pred hhhhcCceeeEEEe
Q 007633 136 FQRAAGGYGGIIIN 149 (595)
Q Consensus 136 ~q~~~Gl~G~liV~ 149 (595)
.||.|.|+|+
T Consensus 97 ----~~M~G~I~Ve 106 (106)
T d1id2a_ 97 ----PFMRGKVIVE 106 (106)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCCEEEEEEC
Confidence 4899999985
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.74 E-value=8e-05 Score=62.40 Aligned_cols=88 Identities=13% Similarity=0.137 Sum_probs=61.5
Q ss_pred CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 47 G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
+....+...+-.|=...|.++.|++|+++++|. +..+++...++. -+..+.||+..+..|++ +++|
T Consensus 32 ~~~v~v~a~~~~f~p~~l~vp~G~~V~~~lts~-DV~H~f~ip~~~------------v~~d~~PG~~~~~~~~~-~~~G 97 (122)
T d2cuaa_ 32 QYTVYVLAFAFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPG 97 (122)
T ss_dssp EEEEEEEEETTEEESSSEEEETTSEEEEEEEBS-SSCEEEEETTSS------------CEEEECBTBCEEEEEEC-CSCE
T ss_pred eEEEEEEEEeccccCCEEEEeCCCEEEEEEEcC-CccceeEecCCC------------eeEEEecCceEEEEEEe-ccce
Confidence 334444444433333589999999999999997 333444332221 12446799999999988 6899
Q ss_pred eeEEccCc---chhhhcCceeeEEEec
Q 007633 127 SFFYFPSL---DFQRAAGGYGGIIINN 150 (595)
Q Consensus 127 t~wYH~H~---~~q~~~Gl~G~liV~~ 150 (595)
+|+|.|+. ..| .+|.|.|+|++
T Consensus 98 ~y~~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 98 EYRIICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EEEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred eEEEEehhccCCCc--ccCeEEEEEEC
Confidence 99999984 234 47999999974
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.21 E-value=0.00011 Score=66.07 Aligned_cols=93 Identities=11% Similarity=-0.075 Sum_probs=59.2
Q ss_pred EEecCCCcEEEEEEEcCCCc----------------------cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCccc
Q 007633 434 LINGTYKGFMEIIFQNNDTT----------------------VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARS 491 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~----------------------~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD 491 (595)
+|.++.|+.+++.+.|.-.. ...+|+||-+.- ...+|.- . +....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~~--~--------~~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYP--E--------AWFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCCT--T--------SCBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCCc--c--------cccccC
Confidence 46788999999999996321 246999996531 1111110 0 000111
Q ss_pred EE-EeCCCcEEEEEEEecCc-ceeEEeeccc----cceeccceEEEEEecCCC
Q 007633 492 TT-QVFPGAWTAILVYLDNA-GIWNLRAENL----DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 492 Tv-~v~p~g~~~irf~adNP-G~W~~HCHil----~H~~~GM~~~~~V~~~~~ 538 (595)
.+ ..+++.....+|.++.+ |.|.||||.. .+.+.||...+.|.++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 11 12345566778888775 8999999974 477889999998887764
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.19 E-value=0.00058 Score=56.94 Aligned_cols=71 Identities=14% Similarity=0.246 Sum_probs=54.5
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+.|.+.|.|.+ ..|.|.+-+.. =.+.+.||....+.|.+++||.|.
T Consensus 49 l~vp~G~~V~~~lts~D-V~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~~~G~y~ 100 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD-VIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 100 (122)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETTSS---------------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEcCC-ccceeEecCCC---------------------------eeEEEecCceEEEEEEeccceeEE
Confidence 56889999999999985 44766543221 123567889899999999999999
Q ss_pred Eeecc---ccceeccceEEEEEec
Q 007633 515 LRAEN---LDTWYLGQEVYVNVIN 535 (595)
Q Consensus 515 ~HCHi---l~H~~~GM~~~~~V~~ 535 (595)
+.|+. ..| .+|...+.|.+
T Consensus 101 ~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 101 IICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EECCSCCSTTS--TTCEEEEEEEC
T ss_pred EEehhccCCCc--ccCeEEEEEEC
Confidence 99997 345 57888888763
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.08 E-value=0.00066 Score=59.95 Aligned_cols=76 Identities=13% Similarity=0.197 Sum_probs=62.5
Q ss_pred eEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-c
Q 007633 433 SLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN-A 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN-P 510 (595)
.++.++.|+++.|.|.|.+.. .+.||++||+|.|++.+.... .|...|++.|.+|+..-+.++++. +
T Consensus 55 ~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via~DG~~v-----------~P~~~d~i~i~~GqR~dvlv~~~~~~ 123 (168)
T d1v10a2 55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH-----------QPLTVDSLTIFAGQRYSVVVEANQAV 123 (168)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEEeCCeec-----------CceEEeEEEEccCceEEEEEECCCCC
Confidence 467889999999999999865 589999999999999864322 356689999999999999999975 6
Q ss_pred ceeEEeecc
Q 007633 511 GIWNLRAEN 519 (595)
Q Consensus 511 G~W~~HCHi 519 (595)
|.|-++-..
T Consensus 124 ~~y~ira~~ 132 (168)
T d1v10a2 124 GNYWIRANP 132 (168)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 876666543
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.06 E-value=0.00038 Score=62.35 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=66.7
Q ss_pred EEEEEcCC--------CCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEE
Q 007633 51 QVIGINGQ--------FPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWT 116 (595)
Q Consensus 51 ~~~~~Ng~--------~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~ 116 (595)
..++|||+ -+-..|.+++|+++++|+.|... ....++.+|..+. --..||.+. ....|.|||+++
T Consensus 34 d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~-via~DG~~v~P~~~~~~~i~~GqRyd 112 (181)
T d2q9oa2 34 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT-VIAADMVPVNAMTVDSLFLAVGQRYD 112 (181)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEEECCceEE-EEEeCCeEccceEeCEEEecCCcEEE
Confidence 46789986 23468999999999999999974 5667888888654 256899873 345699999999
Q ss_pred EEEEECCceeeeEEccCcc
Q 007633 117 YQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 117 Y~f~~~~~~Gt~wYH~H~~ 135 (595)
.-.++.+.+|.||-.....
T Consensus 113 vlv~a~~~~~~Y~ir~~~~ 131 (181)
T d2q9oa2 113 VVIDASRAPDNYWFNVTFG 131 (181)
T ss_dssp EEEECCSCSSEEEEEEECC
T ss_pred EEEeCCCCCccEEEEEecc
Confidence 9999976689999877653
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.05 E-value=0.0011 Score=57.91 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=74.3
Q ss_pred eeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCccc--EEEeCCCcEEEEEEEecC
Q 007633 432 TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARS--TTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rD--Tv~v~p~g~~~irf~adN 509 (595)
.+.++++.|+.|. ++...-+..-+||+-|-+|--|-. .|.+ .|++.++ |+.|++|+-.++.|.+.-
T Consensus 69 ~~aL~AkvGEtV~-~~~~gpN~~SsfHvIGg~~D~V~~-~G~~----------~n~p~~~~qT~~v~~G~a~~~~~tf~~ 136 (178)
T d1mzya2 69 EGALKAKVGDNVL-FVHSQPNRDSRPHLIGGHGDLVWE-TGKF----------HNAPERDLETWFIRGGTAGAALYKFLQ 136 (178)
T ss_dssp GGCEEEETTCEEE-EEEEESSSCBCEEEETCCEEEEET-TCCT----------TSCCEEEESBCCBCTTEEEEEEEECCS
T ss_pred CCCcccccCCeEE-EecccCCCCCCcccccCccceEcc-CCcc----------CCCCCCCceEEEecCCceeEEEEEeCC
Confidence 3567889999984 344444567899999999975543 2332 2455554 889999999999999999
Q ss_pred cceeEEeeccccc-eeccceEEEEEecCCCC
Q 007633 510 AGIWNLRAENLDT-WYLGQEVYVNVINPEID 539 (595)
Q Consensus 510 PG~W~~HCHil~H-~~~GM~~~~~V~~~~~~ 539 (595)
||.+.|--|.+.. ...|....+.|..++..
T Consensus 137 PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~~p 167 (178)
T d1mzya2 137 PGVYAYVNHNLIEAVHKGATAHVLVEGEWDN 167 (178)
T ss_dssp CEEEEEEESSHHHHHTTCCEEEEEEESCCCT
T ss_pred CeEEEEEccHHHHHHhCCCeEEEEeCCCCCc
Confidence 9999999998755 68999999999866543
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=96.83 E-value=0.0014 Score=57.96 Aligned_cols=82 Identities=15% Similarity=0.192 Sum_probs=64.8
Q ss_pred EEEEEcCC--------CCCCeEEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEE
Q 007633 51 QVIGINGQ--------FPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWT 116 (595)
Q Consensus 51 ~~~~~Ng~--------~PgP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~ 116 (595)
....+||. -+.+++.+++|+++++|+.|.. .....++.+|.... --..||++. ....|.|||+++
T Consensus 37 d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~-via~DG~~v~P~~~d~l~i~~gqRyd 115 (170)
T d1gyca2 37 DATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLT-VIEVDGINSQPLLVDSIQIFAAQRYS 115 (170)
T ss_dssp SEEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE-EEEETTEEEEEEEESBEEECTTCEEE
T ss_pred CcccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEE-EEEeCCeeccceEeeEEEecCCeEEE
Confidence 34678875 3457999999999999999997 45677888777653 256899863 345699999999
Q ss_pred EEEEECCceeeeEEccC
Q 007633 117 YQFQVKDQIGSFFYFPS 133 (595)
Q Consensus 117 Y~f~~~~~~Gt~wYH~H 133 (595)
..+++.+.+|.||-+..
T Consensus 116 vlv~~~~~~~~y~ira~ 132 (170)
T d1gyca2 116 FVLNANQTVGNYWIRAN 132 (170)
T ss_dssp EEEECCSCSSEEEEEEE
T ss_pred EEEeCCCCCCcEEEEEe
Confidence 99999656999999865
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=96.65 E-value=0.007 Score=55.11 Aligned_cols=80 Identities=11% Similarity=0.133 Sum_probs=63.4
Q ss_pred eeEEecCCCcEEEEEEEcCCCc-cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-
Q 007633 432 TSLINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN- 509 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN- 509 (595)
..+++++.|+++.+.|.|.+.. .+.|||+||.|+||+.++... +|...|.+.|.+|+..-|.++++.
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v-----------~P~~v~~l~i~pGqRydvlv~~~~~ 142 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYV-----------QPFYTSDIDIYSGESYSVLITTDQN 142 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEE-----------EEEEESCEEECTTCEEEEEEECCSC
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEc-----------ccceeeeEEEccCcEEEEEEEecCC
Confidence 4568899999999999999865 599999999999999974321 356679999999999999999975
Q ss_pred cc-eeEEeeccccc
Q 007633 510 AG-IWNLRAENLDT 522 (595)
Q Consensus 510 PG-~W~~HCHil~H 522 (595)
+| .|.++-.....
T Consensus 143 ~~~~y~i~~~~~~~ 156 (209)
T d1aoza2 143 PSENYWVSVGTRAR 156 (209)
T ss_dssp TTCCEEEEEEEESS
T ss_pred CCCceEEEEecccc
Confidence 44 45555444333
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=96.61 E-value=0.0027 Score=56.06 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=62.4
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-c
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN-A 510 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN-P 510 (595)
.+++++.|+++.+.|.|.+. ..+-|+++||+|.|++.++... .|...|++.|.+|...-+.+++++ +
T Consensus 54 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~via~DG~~v-----------~P~~~~~l~i~~gqR~dvlv~~~~~~ 122 (172)
T d1hfua2 54 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELT-----------EPHTVDRLQIFTGQRYSFVLDANQPV 122 (172)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEEEEeCCEEc-----------ccEEeceEeccCCeEEEEEEEcCCCC
Confidence 46788999999999999875 4589999999999999864322 366789999999999999999986 4
Q ss_pred ceeEEeecc
Q 007633 511 GIWNLRAEN 519 (595)
Q Consensus 511 G~W~~HCHi 519 (595)
|.|-+++..
T Consensus 123 ~~Y~ira~~ 131 (172)
T d1hfua2 123 DNYWIRAQP 131 (172)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 776666553
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=96.57 E-value=0.0021 Score=51.11 Aligned_cols=81 Identities=19% Similarity=0.108 Sum_probs=50.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+ |.+...|.++.+....- ... ..+....+.....++. ...+.++.||.
T Consensus 18 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~--t~~~tf~~~G~ 78 (98)
T d2plta_ 18 KTLTIKSGETVNFV--NNAGFPHNIVFDEDAIP---------SGV------NADAISRDDYLNAPGE--TYSVKLTAAGE 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECGGGSC---------TTC------CHHHHCEEEEECSTTC--EEEEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCCcc---------ccc------cCCcccccccccCCCc--eEEEEecCCce
Confidence 45789999999876 55555666555432210 000 0001122333444444 35667789999
Q ss_pred eEEeeccccceeccceEEEEEe
Q 007633 513 WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~ 534 (595)
|.|+|.. |..+||-..+.|.
T Consensus 79 y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEeCc--CCCCCCEEEEEEC
Confidence 9999976 9999999988873
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=96.54 E-value=0.00093 Score=54.01 Aligned_cols=85 Identities=14% Similarity=0.010 Sum_probs=57.2
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-cCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL-DNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a-dNPG 511 (595)
..++++.|+.|.|+ |.+...|..++....+.. +.. ........++-.+.|+....+.|.+ +.||
T Consensus 19 ~~l~v~~GdtV~f~--n~~~~~h~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G 83 (105)
T d2q5ba1 19 ANVTVHPGDTVKWV--NNKLPPHNILFDDKQVPG-----ASK--------ELADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEEE--ECSSCCEEEEECGGGSGG-----GCH--------HHHHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceeEeecCcccc-----ccc--------ccCCccccccccccCCceEEEEEEeccCCc
Confidence 45789999998874 555555665554333210 000 0001123466677888888888876 6789
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|+|.. |..+||-..+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECST--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--CCCCCCEEEEEEc
Confidence 99999986 9999999988874
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.50 E-value=0.0058 Score=47.81 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=48.9
Q ss_pred eeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 432 TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
...+.++.|+.|.|+ |.+...|.....+.. +..-+...+.+|.. .++.++.||
T Consensus 18 P~~i~I~~GdtV~f~--n~d~~~h~~~~~~~~-----------------------~~~~~~~~~~~g~~--~~~tF~~~G 70 (91)
T d1bxua_ 18 PSTIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGET--FEATFSEPG 70 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCE--EEEECCSCE
T ss_pred CCEEEECCCCEEEEE--ECCcCCceEEecccc-----------------------cccccccccCCCCC--EEEEeccCc
Confidence 346788999999874 665555543322110 01123445556654 456778999
Q ss_pred eeEEeeccccceeccceEEEEE
Q 007633 512 IWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V 533 (595)
.+.|+|.. |..+||-..+.|
T Consensus 71 ~y~Y~C~~--H~~~gM~G~I~V 90 (91)
T d1bxua_ 71 TYTYYCEP--HRGAGMVGKIVV 90 (91)
T ss_dssp EEEEECTT--TGGGTCEEEEEE
T ss_pred eEEEEeCC--CCCCCCEEEEEE
Confidence 99999977 888999888877
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=96.49 E-value=0.0014 Score=52.25 Aligned_cols=80 Identities=13% Similarity=0.032 Sum_probs=48.6
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+ |.+...|.+..+.... ..+... ...-+...+.+|.. ..+.++.||.
T Consensus 19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~~~--------~~~~~~--------~~~~~~~~~~~g~t--~~~tf~~~G~ 78 (98)
T d1pcsa_ 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGV--------PADTAA--------KLSHKGLLFAAGES--FTSTFTEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSS--------CHHHHH--------HHCEEEEECSTTCE--EEEECCSCEE
T ss_pred CEEEECCCCEEEEe--ECCCCccceEEecccc--------CCCccc--------cccccccccCCCcE--EEEeccCCce
Confidence 46789999999987 5555556543322110 000000 00112334455553 3456689999
Q ss_pred eEEeeccccceeccceEEEEEe
Q 007633 513 WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+.|||.. |...||...+.|.
T Consensus 79 y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEecc--CCCCCCEEEEEEC
Confidence 9999976 9999999988873
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.87 E-value=0.0044 Score=45.33 Aligned_cols=45 Identities=7% Similarity=-0.071 Sum_probs=36.5
Q ss_pred eCCCcEEEEEEEecCcc----------eeEEeecccc--ceeccceEEEEEecCCCC
Q 007633 495 VFPGAWTAILVYLDNAG----------IWNLRAENLD--TWYLGQEVYVNVINPEID 539 (595)
Q Consensus 495 v~p~g~~~irf~adNPG----------~W~~HCHil~--H~~~GM~~~~~V~~~~~~ 539 (595)
|.||+..+-+|.+...| +|.||||+.. +...||...+.|..+...
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~l 59 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTL 59 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSS
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCCc
Confidence 67899999999986554 8999999855 567799999999876543
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=95.49 E-value=0.0057 Score=50.79 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=29.1
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEecCC
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
...+.++.||.|.|+|.. |..+||...+.|.++.
T Consensus 63 ~~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 63 EAVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp CEEEECCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred ccccccCCCceEEEEecc--CCCCCCEEEEEECCCC
Confidence 355778999999999987 9999999999997653
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=95.40 E-value=0.03 Score=46.56 Aligned_cols=97 Identities=7% Similarity=-0.038 Sum_probs=67.0
Q ss_pred eEEecCCC-cEEEEEEEcCCCccceeeecCceEEEEEEeCCccCC-------C--CCCCCCC-CCCCcccEEEeCCCcEE
Q 007633 433 SLINGTYK-GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTE-------N--SRGTYNK-WDGVARSTTQVFPGAWT 501 (595)
Q Consensus 433 ~v~~~~~g-~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~-------~--~~~~~n~-~~p~~rDTv~v~p~g~~ 501 (595)
..++++.| +.|.++|.|.+...|-+ =+|.+-+...+. ... . ....+.. .+.+..-|..|.||...
T Consensus 18 ~~i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~ 93 (129)
T d1cuoa_ 18 RSISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cEEEEeCCCEEEEEEEEeCCcCCcee--EEeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCccccc
Confidence 45788999 89999999999888765 345553333221 100 0 0001111 11233447788999999
Q ss_pred EEEEEe---cCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYL---DNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~a---dNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|++ +.||.|.|=|=+--|+ .||...+.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLE 128 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEE
T ss_pred eEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEe
Confidence 999997 4599999999998897 8999999886
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=95.23 E-value=0.0096 Score=49.06 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=28.4
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecCC
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
..+++|.||.|.|+|-. |..+||...+.|.++.
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence 35677999999999986 9999999999998763
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.16 E-value=0.038 Score=45.83 Aligned_cols=98 Identities=5% Similarity=-0.081 Sum_probs=66.6
Q ss_pred eeEEec-CCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccC------CCC-CCC-CCC-CCCCcccEEEeCCCcEE
Q 007633 432 TSLING-TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWT------ENS-RGT-YNK-WDGVARSTTQVFPGAWT 501 (595)
Q Consensus 432 ~~v~~~-~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~------~~~-~~~-~n~-~~p~~rDTv~v~p~g~~ 501 (595)
..-+++ +.|+.|.++|.|.+...|-+=+|- .-++..+. ... ... ... +.. .+-+..-|..|.||...
T Consensus 17 ~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHN--WVLSTAAD-MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CSEEEECTTCSEEEEEEECCSSSCHHHHCBC--CEEEEGGG-HHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cceEEEecCCCEEEEEEEeCCccchheeecC--cccccchh-HHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 345778 479999999999999988864443 32332211 000 000 001 101 11234557788999999
Q ss_pred EEEEEe---cCcceeEEeeccccceeccceEEEEE
Q 007633 502 AILVYL---DNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 502 ~irf~a---dNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.|++ +.||.+.|=|=+--|| .||-..+.|
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V 127 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTL 127 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEE
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEE
Confidence 999997 4799999999999999 999998887
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=94.95 E-value=0.017 Score=45.71 Aligned_cols=83 Identities=17% Similarity=0.049 Sum_probs=48.7
Q ss_pred eeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 432 TSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
...++++.|+.|.|+ |.+...|.+......+- .|. ... . . ....+.....||... .+.++.||
T Consensus 16 P~~iti~~GdtV~f~--n~~~~~Hnv~~~~~~~~-----~~~-~~~-~--~----~~~~~~~~~~~g~t~--~~tF~~~G 78 (99)
T d1plca_ 16 PSEFSISPGEKIVFK--NNAGFPHNIVFDEDSIP-----SGV-DAS-K--I----SMSEEDLLNAKGETF--EVALSNKG 78 (99)
T ss_dssp SSEEEECTTCEEEEE--ECSSCCBCCEECTTSSC-----TTC-CHH-H--H----CCCTTCCBCSTTCEE--EEECCSCE
T ss_pred CCEEEECCCCEEEEE--ECCCCCccEEEccCcCC-----Ccc-ccc-c--C----cccccccccCCCceE--EEecCCCc
Confidence 346789999999884 66666687653322110 000 000 0 0 001111223455544 44568999
Q ss_pred eeEEeeccccceeccceEEEEE
Q 007633 512 IWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V 533 (595)
.+-|+|- .|..+||-..+.|
T Consensus 79 ~y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 79 EYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEEECG--GGTTTTCEEEEEE
T ss_pred eEEEEeC--CCcCCCcEEEEEE
Confidence 9999995 4999999998876
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=94.81 E-value=0.056 Score=44.77 Aligned_cols=96 Identities=7% Similarity=-0.082 Sum_probs=67.9
Q ss_pred eEEecC-CCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCC-------CC-CCCCCC--CCCCcccEEEeCCCcEE
Q 007633 433 SLINGT-YKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTE-------NS-RGTYNK--WDGVARSTTQVFPGAWT 501 (595)
Q Consensus 433 ~v~~~~-~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~-------~~-~~~~n~--~~p~~rDTv~v~p~g~~ 501 (595)
..+.+. .|+.|.++|.|.+...|.+=+ |.+-++..+. ... .. ...|-. .++....|..+.||+..
T Consensus 18 ~~i~V~~~ge~v~i~~~N~g~~pH~~~~--hn~vi~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 18 KDIAIDKSCKTFTVELTHSGSLPKNVMG--HNLVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHC--BCCEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CeEEEecCCcEEEEEEEeCCccccceee--ecccccccch--hHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 456775 599999999999999998744 4444444321 110 00 111222 12344567788999999
Q ss_pred EEEEEe---cCcceeEEeeccccceeccceEEEEE
Q 007633 502 AILVYL---DNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 502 ~irf~a---dNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.|++ +-||.|.|=|=.--|| .||-..+.|
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V 127 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTL 127 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEE
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEE
Confidence 999998 4789999999999999 999998887
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=94.69 E-value=0.031 Score=44.63 Aligned_cols=71 Identities=11% Similarity=-0.003 Sum_probs=45.0
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.| .|.+...|.++.... .+... . .+.-.+.+++. .++.++.||.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~~H~v~~~~~----------~~~~~---~--------~~~~~~~~g~~--~~~tf~~pG~y 88 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAMPHNVHFVAG----------VLGEA---A--------LKGPMMKKEQA--YSLTFTEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTT----------TSSSS---C--------EECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEEecc----------cCCcc---c--------ccccccCCCce--EEEEecCCeEE
Confidence 567889999988 477777787653321 11100 0 11112334443 45677899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|-+ | .||...+.|
T Consensus 89 ~y~C~~--H--~~M~G~I~V 104 (105)
T d2ov0a1 89 DYHCTP--H--PFMRGKVVV 104 (105)
T ss_dssp EEECSS--C--TTCEEEEEE
T ss_pred EEEecC--C--CCCEEEEEE
Confidence 999987 4 689888877
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=94.44 E-value=0.016 Score=45.60 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=26.3
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.+.+.++.||.|.|+|-. |..+||-..+.|.
T Consensus 67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CEEEECCSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 467778999999999965 8899999988873
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=94.11 E-value=0.037 Score=46.01 Aligned_cols=97 Identities=8% Similarity=-0.033 Sum_probs=64.9
Q ss_pred eEEec-CCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCC--------CCCCCC-CCCC-CCcccEEEeCCCcEE
Q 007633 433 SLING-TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTE--------NSRGTY-NKWD-GVARSTTQVFPGAWT 501 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~--------~~~~~~-n~~~-p~~rDTv~v~p~g~~ 501 (595)
.-+.+ +.|+.|.++|.|.+...|-+= +|.|-+...+. ... .....+ .-.+ ...--|..+.||+..
T Consensus 18 ~~i~V~k~G~~V~l~~~N~g~l~h~~m--~hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~ 93 (129)
T d2ccwa1 18 KEIVVDKSCKQFTMHLKHVGKMAKVAM--GHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHH--CBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred ceEEEecCCCEEEEEEEcCCcCchhee--eccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCCCceE
Confidence 45677 689999999999998776543 34554443321 100 000011 1111 122336678899999
Q ss_pred EEEEEe---cCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYL---DNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~a---dNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|++ +.||.|.|=|=+--|| .||-..+.|-
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 999999 4799999999998897 8999998874
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=93.92 E-value=0.029 Score=46.24 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=28.1
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecCC
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
..+.++.||.|-|+|=. |..+||...+.|.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESSSC
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECCCC
Confidence 45667899999999977 9999999999997653
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=93.79 E-value=0.058 Score=42.24 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=25.8
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
...+.++.||.+.|+|-. |..+||-..+.|.
T Consensus 68 ~~~~~f~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 68 TVVRKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEecCCCceEEEEeCC--CccCCCeEEEEEC
Confidence 345677899999999975 9999999988873
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=93.68 E-value=0.036 Score=44.04 Aligned_cols=43 Identities=19% Similarity=0.121 Sum_probs=35.0
Q ss_pred ccEEEeCCCcEEEEEEEe-cCcceeEEeeccccceeccceEEEEEe
Q 007633 490 RSTTQVFPGAWTAILVYL-DNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 490 rDTv~v~p~g~~~irf~a-dNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.+.....++....+.|.+ +.||.+.|+|-. |..+||-..+.|.
T Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 61 HKQLLMSPGQSTSTTFPADAPAGEYTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEEECSTTCEEEEECCTTCCSEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccccccCCCcceEEEEEeccCCceEEEEeCC--CcCCCcEEEEEEe
Confidence 455666777888888876 679999999975 9999999988874
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=93.38 E-value=0.074 Score=43.72 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=27.5
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecC
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
+.+.++.||.|-|+|.. |..+||...+.|.++
T Consensus 64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDA 95 (124)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred EEEecCCCceEEEEecc--CcCCCCEEEEEECCC
Confidence 45677899999999986 999999999999754
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=92.81 E-value=0.087 Score=41.22 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=25.0
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEE
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
...+.++.||.+-|+|-. |...||-..+.|
T Consensus 69 ~~~~tf~~~G~y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 69 EYSVTLTEKGTYKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEEEEECSCEEEEEECGG--GTTTTCEEEEEE
T ss_pred eEEEEecCCceEEEEECc--CCCCCCEEEEEE
Confidence 345566899999999975 999999998876
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=92.71 E-value=0.019 Score=45.47 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=25.7
Q ss_pred EEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
...+.++.||.|.|+|.. |..+||-..+.|.
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 445566889999999986 9999999988873
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=92.44 E-value=0.28 Score=42.65 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=51.1
Q ss_pred CcEEEEEEEcCCCc-cceeee-cCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC-cc-eeEE
Q 007633 440 KGFMEIIFQNNDTT-VQSYHM-DGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN-AG-IWNL 515 (595)
Q Consensus 440 g~~ve~vi~N~~~~-~HP~Hl-HG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN-PG-~W~~ 515 (595)
++.+.|.|.|.+.. .+-+++ +|+.|+|++.+.+... .|...|++.+.||+..-|.+.+.. +| .|.+
T Consensus 65 ~~~~RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~----------~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l 134 (174)
T d1gska2 65 PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLP----------RSVKLNSFSLAPAERYDIIIDFTAYEGESIIL 134 (174)
T ss_dssp SSEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEE----------EEEEESEEEECTTCEEEEEEECGGGTTCEEEE
T ss_pred CceEEEEEEecccCceeeEeecCCCcEEEEEECCCccc----------CceEeCEEEEcCCcEEEEEEECCCCCCceEEE
Confidence 55789999998765 478999 7999999999765432 255679999999999999888843 44 4444
Q ss_pred e
Q 007633 516 R 516 (595)
Q Consensus 516 H 516 (595)
.
T Consensus 135 ~ 135 (174)
T d1gska2 135 A 135 (174)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=92.36 E-value=0.12 Score=41.10 Aligned_cols=71 Identities=11% Similarity=0.051 Sum_probs=43.3
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.| .|.+...|.+-... +.... ..++ .-.+.++. ...+.++.||.+
T Consensus 35 ~i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~~~---~~f~--------s~~~~~~~--~~~~tf~~~G~y 89 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVMPHNVAFKK----------GIVGE---DAFR--------GEMMTKDQ--AYAITFNEAGSY 89 (106)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECT----------TTSSS---SCEE--------CCCBCTTE--EEEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEecc----------ccCCc---cccc--------ccccCCCc--eEEEecCCCeEE
Confidence 467889999877 57776667643221 10000 0111 11222333 355677899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|=+ | .||-..+.|
T Consensus 90 ~y~C~~--H--~~M~G~I~V 105 (106)
T d1id2a_ 90 DYFCTP--H--PFMRGKVIV 105 (106)
T ss_dssp EEECSS--C--TTCEEEEEE
T ss_pred EEEccC--C--CCCEEEEEE
Confidence 999987 5 699998877
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=90.77 E-value=0.24 Score=42.65 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=52.0
Q ss_pred CcEEEEEEEcCCCcc-ceeee-cCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCc--ceeEE
Q 007633 440 KGFMEIIFQNNDTTV-QSYHM-DGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNA--GIWNL 515 (595)
Q Consensus 440 g~~ve~vi~N~~~~~-HP~Hl-HG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNP--G~W~~ 515 (595)
|+++.|.|.|.+... .-+++ +||.|+|++.+++... .|...|++.+.||+...+.+.+... +.|+-
T Consensus 58 ~~~~RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~~~----------~P~~~~~l~l~pgeR~dvlv~~~~~~~~~~~~ 127 (165)
T d1kv7a2 58 RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLP----------EPVKVSELPVLMGERFEVLVEVNDNKPFDLVT 127 (165)
T ss_dssp EEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEE----------EEEEESCEEECTTCEEEEEEEECTTCCEEEEE
T ss_pred CcEEEEEEEEcccCceeeEEecCCCeEEEEEeCCcccc----------CceEeCeEEECCCCEEEEEEECCCCCcEEEEE
Confidence 678999999987654 35654 8999999999765331 3556789999999999998888654 45555
Q ss_pred eecc
Q 007633 516 RAEN 519 (595)
Q Consensus 516 HCHi 519 (595)
.++-
T Consensus 128 l~~~ 131 (165)
T d1kv7a2 128 LPVS 131 (165)
T ss_dssp CCCS
T ss_pred EecC
Confidence 4554
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=90.67 E-value=0.34 Score=41.22 Aligned_cols=75 Identities=9% Similarity=0.037 Sum_probs=54.1
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|.+.+.+.+- .|.|.+-.... -..+.||-...+.|.+|.||.
T Consensus 27 n~l~lP~g~pV~~~ltS~DV-iHsF~vP~l~~---------------------------k~daiPG~~~~~~~~~~~~G~ 78 (158)
T d1cyxa_ 27 NEIAFPANTPVYFKVTSNSV-MHSFFIPRLGS---------------------------QIYAMAGMQTRLHLIANEPGT 78 (158)
T ss_dssp SEEEEETTSCEEEEEEESSS-CEEEEEGGGTE---------------------------EEEECTTCCEEEEECCSSSEE
T ss_pred eeEEeeCCCeEEEEEEcCCc-chhhhhhhcce---------------------------eeccCCCceeeeeeeecCCCc
Confidence 34678889999999998744 46554422222 235678888999999999999
Q ss_pred eEEeeccccce-eccceEEEEEec
Q 007633 513 WNLRAENLDTW-YLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~-~~GM~~~~~V~~ 535 (595)
|...|...-.. |..|...+.|+.
T Consensus 79 y~g~Cae~CG~gH~~M~~~v~vv~ 102 (158)
T d1cyxa_ 79 YDGICAEICGPGHSGMKFKAIATP 102 (158)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEES
T ss_pred EEEEchhhcCcccccCceEEEEEC
Confidence 99999975544 566666666664
|
| >d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=82.36 E-value=1.4 Score=36.90 Aligned_cols=77 Identities=13% Similarity=0.207 Sum_probs=57.5
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|.+.+...+ -.|.|.+-.-.. -...-||-...+.|.++.||.
T Consensus 67 ~~l~lP~g~~v~~~ltS~D-ViHsf~vP~l~~---------------------------k~daiPG~~~~~~~~~~~~G~ 118 (152)
T d3dtub1 67 TAMVVPVNKTVVVQVTGAD-VIHSWTVPAFGV---------------------------KQDAVPGRLAQLWFRAEREGI 118 (152)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEEEEGGGTE---------------------------EEEECBTCCEEEEEECCSCEE
T ss_pred CeEEEeCCCEEEEEEecCc-hhhhhhcccccE---------------------------EEEcCCCCceEEEEEecCCCe
Confidence 3467889999999999874 457665533222 235567888889999999999
Q ss_pred eEEeecccc-ceeccceEEEEEecCC
Q 007633 513 WNLRAENLD-TWYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~-H~~~GM~~~~~V~~~~ 537 (595)
+...|.-+- .-|..|...++|++++
T Consensus 119 y~g~C~e~CG~~H~~M~~~v~vv~~~ 144 (152)
T d3dtub1 119 FFGQCSELCGISHAYMPITVKVVSEE 144 (152)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred eEeecHhhcCccccCCeEEEEEECHH
Confidence 999999654 3467788888888764
|
| >d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Mavicyanin species: Zucchini (Cucurbita pepo) [TaxId: 3663]
Probab=81.26 E-value=0.34 Score=38.15 Aligned_cols=32 Identities=13% Similarity=0.283 Sum_probs=27.9
Q ss_pred EEEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 118 QFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 118 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.|++ +++|++||-|-.+.|=..||...|.|.|
T Consensus 73 ~v~l-~~~g~~yF~C~~~~HC~~Gmkl~I~V~P 104 (104)
T d1ws8a_ 73 SIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDP 104 (104)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC
T ss_pred EEEE-ecCccEEEECCCcchhhCCCEEEEEECC
Confidence 4666 5799999999999999999999999875
|