Citrus Sinensis ID: 007735
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 591 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU40 | 587 | Monocopper oxidase-like p | yes | no | 0.928 | 0.935 | 0.825 | 0.0 | |
| Q8VXX5 | 589 | Monocopper oxidase-like p | no | no | 0.957 | 0.960 | 0.679 | 0.0 | |
| Q9FHN6 | 592 | Monocopper oxidase-like p | no | no | 0.971 | 0.969 | 0.651 | 0.0 | |
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.878 | 0.935 | 0.470 | 1e-140 | |
| P29162 | 554 | L-ascorbate oxidase homol | N/A | no | 0.910 | 0.971 | 0.450 | 1e-134 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.881 | 0.899 | 0.307 | 3e-56 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.847 | 0.907 | 0.307 | 9e-56 | |
| P14133 | 587 | L-ascorbate oxidase OS=Cu | N/A | no | 0.846 | 0.851 | 0.310 | 5e-55 | |
| Q0IQU1 | 564 | Laccase-22 OS=Oryza sativ | no | no | 0.903 | 0.946 | 0.286 | 5e-54 | |
| Q8RYM9 | 562 | Laccase-2 OS=Oryza sativa | no | no | 0.857 | 0.902 | 0.285 | 4e-48 |
| >sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | Back alignment and function desciption |
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Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/549 (82%), Positives = 497/549 (90%)
Query: 19 SLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE 78
S C AAD + +++FEVSYITASPLGVPQQVIAINGKFPGPTINVTTN N+VVNVRNKLDE
Sbjct: 16 SFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVVNVRNKLDE 75
Query: 79 SLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGG 138
LL+HW+GIQQRR SWQDG+LGTNCPIPPKWNWTY+FQVKDQ+GSFFYFPSLHFQRASGG
Sbjct: 76 GLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGG 135
Query: 139 FGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKG 198
FG F++N RAIIP+PF TPDGDIT+ IGDWY RNHTALRK LD GK LGMPDGVLINGKG
Sbjct: 136 FGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKG 195
Query: 199 PYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
PY+YN TLV DGID+ETI VHPGKTYR+RV NVGISTSLNFRIQ HNL+LAE+EGSYTVQ
Sbjct: 196 PYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQ 255
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
QNYTSLDIHVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV IL YTNSKGKA
Sbjct: 256 QNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKA 315
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
+G LP GP DEFDKTFSMNQARSIRWNVSASGARPNPQGSF+YGSINVT+VYVLRN PP
Sbjct: 316 KGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPV 375
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
I GKRR TL+GISF NPSTPIRLAD KVK YKLDFP +P+TGP ++ TS+INGTYRG
Sbjct: 376 TISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRG 435
Query: 439 FMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498
FMEV+LQNNDTKM +YHMSGYAFFVVGMDYGEWT+NSRGTYNKWDGIAR+T QVYPGAW+
Sbjct: 436 FMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWS 495
Query: 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQK 558
AIL+SLDN G WNLRTENLDSWYLGQETYVRVVNP+ NKTEF PDN L+CGALS LQK
Sbjct: 496 AILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCGALSKLQK 555
Query: 559 PEDISAATA 567
P+ +S++ +
Sbjct: 556 PQKVSSSAS 564
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May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/567 (67%), Positives = 466/567 (82%), Gaps = 1/567 (0%)
Query: 2 ALCRGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIN 61
A C L+ + ALL+++ AAD FV +DF VSY+TASPLGVPQQVIA+NG+FPGP +N
Sbjct: 3 ATCSLLASFLLCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLN 62
Query: 62 VTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121
TTN NVVVNV N LDE LL+ W GIQ RR+SWQDG+LGTNCPIPP+WN+TYQFQVKDQ+
Sbjct: 63 ATTNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQI 122
Query: 122 GSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLD 181
GSFFY PSL+FQRASGGFG +INNR IIPIPF PDG++ +IGDWYT++H ALR+ LD
Sbjct: 123 GSFFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALD 182
Query: 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI 241
+GK LGMPDGVLINGKGPY+YN++ VPDGIDY T V PGKTYRIRVHNVGISTSLNFRI
Sbjct: 183 SGKELGMPDGVLINGKGPYKYNSS-VPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRI 241
Query: 242 QNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK 301
QNH+LLL ETEG YT Q N+T D+HVGQSYSFLVTMDQ+A++DYYIVASARFVNE+ W+
Sbjct: 242 QNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQ 301
Query: 302 RVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRY 361
RVTGVAILHY+NSKG GPLP D +M+Q ++IR N SASGARPNPQGSF Y
Sbjct: 302 RVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHY 361
Query: 362 GSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPV 421
G IN+T Y+LR+ PP +I+G RATL+GISFVNPSTP+RLAD KVKGAYKLDFP +P
Sbjct: 362 GQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPF 421
Query: 422 TGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNK 481
P R++ S+IN TY+GF++V+ QNNDTK+ ++H+ GY+FFVVGMD+G W+++ +G+YN
Sbjct: 422 NRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNN 481
Query: 482 WDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEF 541
WD I+R+T +VYPG WTA+L+SLDNVG+WN+R ENLD WYLG+ETY+R+ NPE KTE
Sbjct: 482 WDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEM 541
Query: 542 PIPDNALFCGALSHLQKPEDISAATAI 568
PDN L+CGAL +LQK + SAAT+I
Sbjct: 542 DPPDNVLYCGALKNLQKEQHHSAATSI 568
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/577 (65%), Positives = 463/577 (80%), Gaps = 3/577 (0%)
Query: 16 LLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNK 75
L+ A D +V +DF +SYITASPLGVPQQVIA+NGKFPGP IN TTN NV VNV N
Sbjct: 16 LIFGFSFAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNH 75
Query: 76 LDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRA 135
LDE LL+ W G+Q RR+SWQDG+LGTNCPIPP WN+TY FQ+KDQ+GS+FY PSL+FQRA
Sbjct: 76 LDEPLLLTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRA 135
Query: 136 SGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLIN 195
SGGFG IINNR ++PIPF PDG+I +IGDWYT+NHTALR+ LD+GK LGMPDGVLIN
Sbjct: 136 SGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLIN 195
Query: 196 GKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255
GKGP++YN++ VPDGI++ET+ V PGKTYRIRVHNVGISTSLNFRIQNH LLL ETEG Y
Sbjct: 196 GKGPFKYNSS-VPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRY 254
Query: 256 TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315
T Q N+T D+HVGQSYSFLVTMDQNA++DYYIVASARFVNE+ W+RVTGV ILHY+NSK
Sbjct: 255 TSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSK 314
Query: 316 GKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNK 375
G A GPLP D +MNQ R+I+ N SASGARPNPQGSF YG IN+T Y+LR+
Sbjct: 315 GPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSL 374
Query: 376 PPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGP-PRMETSVING 434
PP I+GK RATL+GISFVNPSTP+RLAD KVKG Y LDFP +P+ PR+ +S+IN
Sbjct: 375 PPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYMLDFPDRPLDEKLPRLSSSIINA 434
Query: 435 TYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP 494
TY+GF++VI QNNDTK+ ++H+ GYAF+VV MD+G W+++ +YN WD +AR+T +VYP
Sbjct: 435 TYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYP 494
Query: 495 GAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALS 554
GAWTA+L+SLDNVG+WN+R ENLD WYLGQETY+R++NPE TE P+N ++CGAL
Sbjct: 495 GAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCGALQ 554
Query: 555 HLQKPEDISAAT-AITGDRLKMFFTLLMTMCAMLVLF 590
+QK + S+AT ++T +L + F+++M + + F
Sbjct: 555 AMQKEQHHSSATKSMTNGQLILIFSMMMVLLSSFSSF 591
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/540 (47%), Positives = 358/540 (66%), Gaps = 21/540 (3%)
Query: 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHW 84
D + + + V+Y TASPLGVPQQVI ING+FPGP IN T+NNNV++NV N LDE L+ W
Sbjct: 25 DPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLTW 84
Query: 85 SGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII 144
+GIQ R++ WQDG GT CPI P N+TY FQ KDQ+GS+FY+P+ RA+GG+GG +
Sbjct: 85 NGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLRV 144
Query: 145 NNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNT 204
N+R +IP+P+ P+ D T+LIGDWYT++HT L+K LD G+ +G PDG++INGK
Sbjct: 145 NSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGK------- 197
Query: 205 TLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSL 264
+ DG D + PGKTYR+R+ NVG+ TS+NFRIQNH + L E EGS+ +Q +Y SL
Sbjct: 198 SGKGDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSL 257
Query: 265 DIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPE 324
D+HVGQ + +VT +Q DYY+VAS+RF+ +T +L Y KG A LP
Sbjct: 258 DVHVGQCFGTIVTANQEPK-DYYMVASSRFLKTV----ITTTGLLRYEGGKGPASSQLPA 312
Query: 325 GPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKR 384
GP +S+NQ RS RWN++AS ARPNPQGS+ YG IN+T L N + +DGK
Sbjct: 313 GP---VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKL 368
Query: 385 RATLSGISFVNPSTPIRLADWFKVKG-AYKLDF----PTKPVTGPPRMETSVINGTYRGF 439
R L+G+S P TP++LA++F + +K D PT ++E +V+N T+R F
Sbjct: 369 RFALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTF 428
Query: 440 MEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTA 499
+EV+ +N++ + ++H+ GY+FF V ++ G WT R YN D ++R T QVYP W A
Sbjct: 429 VEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAA 488
Query: 500 ILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKP 559
IL++ DN G+WN+R+EN + YLGQ+ Y V++PE + + E+ +P+ +L CG + + KP
Sbjct: 489 ILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKNTPKP 548
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Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/559 (45%), Positives = 352/559 (62%), Gaps = 21/559 (3%)
Query: 14 IALLASLCS---AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVV 70
+ALL L A D ++YF++ V+Y T +PLGVPQQ I ING+FPGP IN T+NNN+VV
Sbjct: 9 VALLLCLSVGVIAEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINCTSNNNIVV 68
Query: 71 NVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130
NV N LDE L W+G+Q R++SWQDG GT CPI P N+TY+FQVKDQ+GS+ YFP+
Sbjct: 69 NVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIGSYSYFPTT 128
Query: 131 HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPD 190
RA+GG+G +++RA+IP+PFD P + + +GDWY + H L+K LD G+ +G PD
Sbjct: 129 ALHRAAGGYGALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKILDGGRTIGRPD 188
Query: 191 GVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250
G++INGK + V + + + GKTYR R N+G+ +S+N R Q H + L E
Sbjct: 189 GIIINGK------SAKVGEAKE-PLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVE 241
Query: 251 TEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILH 310
EGS+TVQ Y SLD+HVGQ S LVT DQ DYY+V S+RF+ ++ ++ VAI+
Sbjct: 242 LEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPK-DYYLVVSSRFLKQA----LSSVAIIR 296
Query: 311 YTNSKGKARGPLPEGPNDEFDK-TFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEV 369
Y N KG A LP P + + +SMNQ RS RWN++AS ARPNPQGS+ YG IN+T
Sbjct: 297 YANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRT 356
Query: 370 YVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF-KVKGAYKLDFPTKPVTGPPR-- 426
+ N + + GK R L+GIS N TP++L ++F A+K D P
Sbjct: 357 IKIFNSMSQ-VGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKL 415
Query: 427 -METSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI 485
+ T+V N TYR F+E+I +N++ + YH+ GY+FF V ++ G W+ R YN DG+
Sbjct: 416 TIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGL 475
Query: 486 ARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPD 545
+R QVYP +W AI+++ DN G+WNLR+E + YLG++ Y V++P + + E+ IPD
Sbjct: 476 SRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPD 535
Query: 546 NALFCGALSHLQKPEDISA 564
N CG + L P A
Sbjct: 536 NHPLCGIVKGLSMPAPYKA 554
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Probable oxidoreductase that may be involved in pollen tube growth. Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 283/583 (48%), Gaps = 62/583 (10%)
Query: 7 LSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNN 66
L L + L + S ++ +EV Y+ +P V+ ING+FPGPTI +
Sbjct: 13 LILFFFGLILAFGISSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGD 72
Query: 67 NVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSF 124
VVV + NKL E ++IHW GI QR + W DG + C I P + Y F V D G+F
Sbjct: 73 TVVVELINKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTF 131
Query: 125 FYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG- 183
FY L QR++G +G I++ PF DG+I +L+ DW+ ++ L +
Sbjct: 132 FYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKP 190
Query: 184 -KGLGMPDGVLINGKGPY------QYNTTLVPDGIDYET------IEVHPGKTYRIRVHN 230
+ +G P +L+NG+G + +Y++ L P + V P KTYRIR+ +
Sbjct: 191 IRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIAS 250
Query: 231 VGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS-LDIHVGQSYSFLVTMDQNASTDYYIV 289
+LNF I NH LL+ E +G+Y VQ YTS +DI+ G+SYS L+T DQN S +Y++
Sbjct: 251 TTALAALNFAIGNHPLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVS 309
Query: 290 ASARFVNESQWKRVTGVAILHY-TNSKGK-ARGPLPEGPN-DEFDKTFSMNQARSIRWNV 346
R + + G+ +L+Y NS K P PE P D+FD++ ++ + +
Sbjct: 310 VGTRGRHPNT---PPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRS------KNFTYRI 360
Query: 347 SASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406
+A+ P P + +++L + +I+G + ++ +S P TP A F
Sbjct: 361 TAAMGSPKPPVK------SNRRIFLLNTQ--NVINGYVKWAINDVSLALPPTPYLGAMKF 412
Query: 407 KVKGAYKLDFPTK------PVTGPPRME-TSVINGTYR----GFMEVILQN------NDT 449
+ A+ + P + + PP E T + NG Y+ ++VILQN N +
Sbjct: 413 NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLS 472
Query: 450 KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509
++H +H+ G+ F+V+G G++T + N + R T ++P WTAI DN G+
Sbjct: 473 EIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGV 532
Query: 510 WNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGA 552
W ++G + VV E K IP AL CG
Sbjct: 533 WAFHCHIEPHLHMG----MGVVFAEGVEKVGR-IPTKALACGG 570
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May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 278/563 (49%), Gaps = 62/563 (11%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGI 87
++ +EV Y+ +P V+ ING+FPGPTI ++VVV + NKL E ++IHW GI
Sbjct: 5 HYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGI 64
Query: 88 QQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
QR + W DG + C I P + Y F V D G+FFY L QR++G +G I++
Sbjct: 65 LQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDP 123
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPY---- 200
PF DG+I +L+ DW+ ++ L + + +G P +L+NG+G +
Sbjct: 124 PQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSI 182
Query: 201 --QYNTTLVP------DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252
+Y++ L P + V P KTYRIR+ + +LNF I NH LL+ E +
Sbjct: 183 AAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD 242
Query: 253 GSYTVQQNYTS-LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY 311
G+Y VQ YTS +DI+ G+SYS L+T DQN S +Y++ R + + G+ +L+Y
Sbjct: 243 GNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNT---PPGLTLLNY 298
Query: 312 -TNSKGK-ARGPLPEGPN-DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTE 368
NS K P P+ P D+FD++ ++ + ++A+ P P F
Sbjct: 299 LPNSVSKLPTSPPPQTPAWDDFDRS------KNFTYRITAAMGSPKPPVKFN------RR 346
Query: 369 VYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTK------PVT 422
+++L + +I+G + ++ +S P TP A + + A+ + P + +
Sbjct: 347 IFLLNTQ--NVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDID 404
Query: 423 GPPRME-TSVINGTYR----GFMEVILQN------NDTKMHAYHMSGYAFFVVGMDYGEW 471
PP E T + NG Y+ ++VILQN N ++ H +H+ G+ F+V+G G++
Sbjct: 405 TPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKF 464
Query: 472 TDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531
+ + N + R T ++P WTAI DN G+W ++G + VV
Sbjct: 465 SAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVV 520
Query: 532 NPEATNKTEFPIPDNALFCGALS 554
E K IP AL CG +
Sbjct: 521 FAEGVEKVGR-IPTKALACGGTA 542
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 274/561 (48%), Gaps = 61/561 (10%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGI 87
++ ++V Y+ SP V V+ ING+FPGPTI + VVV + NKL E ++IHW GI
Sbjct: 40 HYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHWHGI 99
Query: 88 QQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
QR + W DG + C I P +TY+F V D+ G++FY L QR++G +G I++
Sbjct: 100 LQRGTPWADGTASISQCAINPGETFTYRFVV-DKAGTYFYHGHLGMQRSAGLYGSLIVDP 158
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPY---- 200
PF D +I +L+ DW+ ++ L + + +G P +LINGKG +
Sbjct: 159 PEGRSEPFHY-DEEINLLLSDWWHQSVHKQEVGLSSKPMRWIGEPQSILINGKGQFDCSI 217
Query: 201 --QYNTTLVPDGIDYET------IEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252
+YN L + + + V P KTYRIR+ + SLNF I NH LL+ E +
Sbjct: 218 AAKYNQGLKQCELSGKEKCAPFILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVEAD 277
Query: 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY- 311
G+Y + +DI+ G+SYS L+T DQN +Y++ R K G+ +L+Y
Sbjct: 278 GNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVR---ARLPKTPPGLTLLNYL 334
Query: 312 TNSKGKAR-GPLPEGPN-DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEV 369
NS K P PE P+ ++FD++ ++ + + A+ P P RY +
Sbjct: 335 PNSASKLPISPPPETPHWEDFDRS------KNFTFRIFAAMGSPKP--PVRYNR----RL 382
Query: 370 YVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP--TKPV-----T 422
++L + I+G + ++ +S P TP A ++ A+ + P T P+
Sbjct: 383 FLLNTQ--NRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINN 440
Query: 423 GPPRMETSVINGTYRGFM----EVILQN------NDTKMHAYHMSGYAFFVVGMDYGE-W 471
PP ET+ NG Y+ M +VILQN N +++H +H+ G+ F+V+G G+ +
Sbjct: 441 PPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFY 500
Query: 472 TDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531
N + R T ++P WTAI DN G+W ++G + VV
Sbjct: 501 APEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVV 556
Query: 532 NPEATNKTEFPIPDNALFCGA 552
E + IP AL CG+
Sbjct: 557 FAEGVHMVGM-IPPKALACGS 576
|
May be involved in a redox system involving ascorbic acid. Cucumis sativus (taxid: 3659) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 266/569 (46%), Gaps = 35/569 (6%)
Query: 5 RGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTT 64
R LSLL + L SA + ++ F V + L + ++ +NGKFPGPT+
Sbjct: 8 RRLSLLLMAACFLLQALSAHAITRHYKFNVVMRNMTRLCSTKPILTVNGKFPGPTLYARE 67
Query: 65 NNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGS 123
+NV+V V N + ++ IHW G++Q R+ W DG T CPI P ++ Y F + Q G+
Sbjct: 68 GDNVLVKVVNHVAHNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITGQRGT 127
Query: 124 FFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRN-HTALRKTLDA 182
+ +++ RA+ G +I + +P PF P + I++G+W+ + T + + +
Sbjct: 128 LLWHAHINWLRAT-VHGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQL 186
Query: 183 GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQ 242
G G + D ING DG + V GKTY +R+ N ++ L F++
Sbjct: 187 GVGPNISDSHTINGHPGPLSECASSQDGFK---LSVENGKTYMLRIINAALNDDLFFKVA 243
Query: 243 NHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWK 301
H L + E + YT +L I GQ+ + LV +Q A Y+++ + F++ Q
Sbjct: 244 GHELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAGR--YLLSVSPFMDAPVQVD 301
Query: 302 RVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRY 361
TG A LHY N+ + L + T +++ ++++ N + +
Sbjct: 302 NKTGTATLHYANTVSSSMASLTLVKPPPQNATHIVSKFTDSLHSLNSKEYPANVPQTVDH 361
Query: 362 GSINVTEVYVLRNKPPEMIDGKR-RATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420
+ V V N P I+G R T++ ++F+ PSTPI A ++ + G + DFP P
Sbjct: 362 SLLLTVGVGV--NPCPSCINGTRVVGTINNVTFIMPSTPILQAHYYNIPGVFTEDFPATP 419
Query: 421 V-------TGPPRMETSVINGT------YRGFMEVILQNN---DTKMHAYHMSGYAFFVV 464
+ +GP ++T +NGT Y ++V+LQ+ + H H+ G+ FFVV
Sbjct: 420 LHKFNYTGSGPKNLQT--MNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVV 477
Query: 465 GMDYGEWTD-NSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRT--ENLDSWY 521
G G + S T+N D I R T V G WTAI DN G+W + E SW
Sbjct: 478 GKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFEVHTSW- 536
Query: 522 LGQETYVRVVNPEATNKTEFPIPDNALFC 550
G + V N + ++T P P + C
Sbjct: 537 -GLKMAFVVDNGKRPSETLIPPPKDLPQC 564
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 244/546 (44%), Gaps = 39/546 (7%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ 89
+ F++ S L + ++ +NG +PGPTI + V+VNV N + ++ IHW G++Q
Sbjct: 31 YQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGLKQ 90
Query: 90 RRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148
RR+ W DG T CPI ++ Y F V Q G+ ++ + + RA+ G +I A
Sbjct: 91 RRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRAT-VHGAIVILPAA 149
Query: 149 IIPIPFDTPDGDITILIGDWYTRN-HTALRKTLDAGKGLGMPDGVLINGK-GPYQYNTTL 206
+P PF PD + I++G+W+ + T R+ G M D INGK GP L
Sbjct: 150 GVPYPFPKPDDEAEIVLGEWWHADVETVERQGSMLGMAPNMSDAHTINGKPGP------L 203
Query: 207 VPDGIDYET--IEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSL 264
VP + T ++V GKTY +R+ N ++ L F I HN+ + E + +YT +++
Sbjct: 204 VPFCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVVEIDATYTKPFAASTV 263
Query: 265 DIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPE 324
+ GQ+ + LV+ DQ+ Y++VA T AIL Y LP+
Sbjct: 264 QLSPGQTMNVLVSADQSPGR-YFMVAKPFNDVPIPADNKTATAILQYAGVPTSVVPALPQ 322
Query: 325 GPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKR 384
T S + + + + P ++ L P E +
Sbjct: 323 ----TMPATNSTGSVAAFHDKLRSLNSPRYPADVPLAVDRHLLYTIGLNIDPCETCLNRS 378
Query: 385 R--ATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP-----VTGPP-------RMETS 430
R A+L+ I+FV P T + A ++ KG + DFP +P TG P + T
Sbjct: 379 RLAASLNNITFVMPRTALLQAHYYGQKGVFAADFPDRPPARFNYTGVPLTAGLGTSLGTR 438
Query: 431 VINGTYRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTD-NSRGTYNKWDGIA 486
+ Y +E++LQ+ + + H +H+ GY FFVVG G + YN D
Sbjct: 439 LSKIAYNATVELVLQDTNLLSVESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPE 498
Query: 487 RTTTQVYPGAWTAILVSLDNVGIWNLRT--ENLDSWYLGQETYVRVVNPEATNKTEFPIP 544
R T V G WTAI DN G+W L E SW G + V + +++ P P
Sbjct: 499 RNTVGVPAGGWTAIRFRADNPGVWFLHCHLEVHTSW--GLKMAFLVEDGSGPDESVLPPP 556
Query: 545 DNALFC 550
+ C
Sbjct: 557 KDLPKC 562
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 591 | ||||||
| 224071567 | 592 | predicted protein [Populus trichocarpa] | 0.998 | 0.996 | 0.874 | 0.0 | |
| 224125148 | 592 | predicted protein [Populus trichocarpa] | 0.998 | 0.996 | 0.871 | 0.0 | |
| 255583640 | 593 | multicopper oxidase, putative [Ricinus c | 0.998 | 0.994 | 0.864 | 0.0 | |
| 449459706 | 592 | PREDICTED: monocopper oxidase-like prote | 0.966 | 0.964 | 0.875 | 0.0 | |
| 225426946 | 591 | PREDICTED: monocopper oxidase-like prote | 0.998 | 0.998 | 0.851 | 0.0 | |
| 356563298 | 592 | PREDICTED: monocopper oxidase-like prote | 0.974 | 0.972 | 0.847 | 0.0 | |
| 357476949 | 590 | Monocopper oxidase-like protein SKU5 [Me | 0.989 | 0.991 | 0.818 | 0.0 | |
| 356514216 | 597 | PREDICTED: monocopper oxidase-like prote | 0.964 | 0.954 | 0.856 | 0.0 | |
| 297813775 | 587 | hypothetical protein ARALYDRAFT_911635 [ | 0.928 | 0.935 | 0.830 | 0.0 | |
| 15234551 | 587 | Monocopper oxidase-like protein SKU5 [Ar | 0.928 | 0.935 | 0.825 | 0.0 |
| >gi|224071567|ref|XP_002303520.1| predicted protein [Populus trichocarpa] gi|222840952|gb|EEE78499.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/591 (87%), Positives = 545/591 (92%), Gaps = 1/591 (0%)
Query: 1 MALC-RGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPT 59
MALC + L+L IH LL LCSAAD FV +DFEVSYITASPLGVPQQVIAINGKFPGPT
Sbjct: 1 MALCSKFLALFLIHTCLLLGLCSAADPFVSYDFEVSYITASPLGVPQQVIAINGKFPGPT 60
Query: 60 INVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD 119
INVTTNNNV +NVRNKLD++LLIHWSGIQQRRSSWQDGL GTNCPIPPKWNWTYQFQVKD
Sbjct: 61 INVTTNNNVAINVRNKLDDNLLIHWSGIQQRRSSWQDGLPGTNCPIPPKWNWTYQFQVKD 120
Query: 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179
QVGSFFYFPSLH QRASGGFG FIINNRAIIPIPFDTP GDI ILIGDWY RNHTALRK
Sbjct: 121 QVGSFFYFPSLHMQRASGGFGSFIINNRAIIPIPFDTPHGDIVILIGDWYKRNHTALRKA 180
Query: 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNF 239
LDAGK LGMPDGVLINGKGPYQYN TLVPDGIDYETIEV PGKTYRIRVHNVG STSLNF
Sbjct: 181 LDAGKDLGMPDGVLINGKGPYQYNATLVPDGIDYETIEVQPGKTYRIRVHNVGTSTSLNF 240
Query: 240 RIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ 299
RIQNHNLLLAE+EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ
Sbjct: 241 RIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ 300
Query: 300 WKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 359
WKRVTGV ILHYTNSKGKA+GPLP+ PNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF
Sbjct: 301 WKRVTGVGILHYTNSKGKAKGPLPDAPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 360
Query: 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTK 419
RYGSINVT+VYVL+NKP I+GKRRATLSGISFVNP+TPIRLAD FKVKG YKLDFP K
Sbjct: 361 RYGSINVTDVYVLKNKPLVTINGKRRATLSGISFVNPATPIRLADQFKVKGVYKLDFPNK 420
Query: 420 PVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTY 479
P+TG +METSVINGTYRGFMEVILQNNDTKM +YH+SGYA FVVGMDYGEWT+NSRGTY
Sbjct: 421 PLTGSSKMETSVINGTYRGFMEVILQNNDTKMQSYHLSGYAVFVVGMDYGEWTENSRGTY 480
Query: 480 NKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKT 539
NKWDGIAR+T QVYPGAWTAILVSLDNVG+WNLRTENLDSWYLGQETYVR+VNPE TNKT
Sbjct: 481 NKWDGIARSTVQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRIVNPEETNKT 540
Query: 540 EFPIPDNALFCGALSHLQKPEDISAATAITGDRLKMFFTLLMTMCAMLVLF 590
E PIPDNALFCGAL QKPEDIS A +ITG+ K+FFTLLM +CA++ +F
Sbjct: 541 ELPIPDNALFCGALGKFQKPEDISFAVSITGNGSKLFFTLLMAVCALMSVF 591
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125148|ref|XP_002329905.1| predicted protein [Populus trichocarpa] gi|222871142|gb|EEF08273.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/591 (87%), Positives = 549/591 (92%), Gaps = 1/591 (0%)
Query: 1 MAL-CRGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPT 59
MAL + L+L IHI LL SLC AAD FV +DFEVSYITASPLGVPQQVIAINGKFPGPT
Sbjct: 1 MALRSKFLALFLIHICLLLSLCLAADPFVSYDFEVSYITASPLGVPQQVIAINGKFPGPT 60
Query: 60 INVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD 119
INVTTNNNV +N++NKLDE+LL+HWSGIQQRRSSWQDG+LGTNCPIPPKWNWTYQFQVKD
Sbjct: 61 INVTTNNNVAINIKNKLDENLLMHWSGIQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKD 120
Query: 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179
Q+GSFFYFP+LH QRASGGFG F+INNRAIIPIPFDTP GDI ILIGDWY RNHTALRK
Sbjct: 121 QIGSFFYFPTLHMQRASGGFGSFVINNRAIIPIPFDTPHGDIVILIGDWYKRNHTALRKA 180
Query: 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNF 239
LDAGK LGMPDGVLINGKGPYQYNTTLVPDGIDYETIEV PGKTYRIRVHNVG STSLNF
Sbjct: 181 LDAGKDLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVQPGKTYRIRVHNVGTSTSLNF 240
Query: 240 RIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ 299
RIQNHNLLLAE+EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ
Sbjct: 241 RIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ 300
Query: 300 WKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 359
WKRVTGVAILHYTNSKGKA+GPLPE PNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF
Sbjct: 301 WKRVTGVAILHYTNSKGKAKGPLPEAPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 360
Query: 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTK 419
RYGSINVT+VYVL+NKP I+GKRRATLSGISFVNP+TPIRLAD FKVKGAYKLDFP
Sbjct: 361 RYGSINVTDVYVLKNKPLVTINGKRRATLSGISFVNPTTPIRLADQFKVKGAYKLDFPET 420
Query: 420 PVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTY 479
P+TGPP+M TSVINGTYRGFMEVILQNNDTKMH+YH+SGYA FVVGMDYGEWT+NSRGTY
Sbjct: 421 PLTGPPKMATSVINGTYRGFMEVILQNNDTKMHSYHLSGYAVFVVGMDYGEWTENSRGTY 480
Query: 480 NKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKT 539
NKWDGIAR+T Q YPGAWTAILVSLDNVG+WNLRTENLDSWYLGQETY+R+VNPE TNKT
Sbjct: 481 NKWDGIARSTVQAYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYIRIVNPEETNKT 540
Query: 540 EFPIPDNALFCGALSHLQKPEDISAATAITGDRLKMFFTLLMTMCAMLVLF 590
E PIPDNALFCG LS LQKPEDIS A +ITG+R K+ F LLM +CA++ +F
Sbjct: 541 ELPIPDNALFCGELSKLQKPEDISFAASITGNRSKLLFMLLMAVCALMSVF 591
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583640|ref|XP_002532575.1| multicopper oxidase, putative [Ricinus communis] gi|223527702|gb|EEF29809.1| multicopper oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1053 bits (2722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/592 (86%), Positives = 551/592 (93%), Gaps = 2/592 (0%)
Query: 1 MALCRGLSL-LAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPT 59
MALC+ +L L IHI LL SLCSA D FV ++FEVSYI ASPLGVPQQVIAINGKFPGPT
Sbjct: 1 MALCKFFALFLLIHICLLLSLCSAEDPFVSYNFEVSYIEASPLGVPQQVIAINGKFPGPT 60
Query: 60 INVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD 119
INVTTNNNVV+NVRNKLDE+LL+HWSGIQQRRSSWQDGL GTNCPIPPKWNWTYQFQVKD
Sbjct: 61 INVTTNNNVVINVRNKLDENLLMHWSGIQQRRSSWQDGLPGTNCPIPPKWNWTYQFQVKD 120
Query: 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179
Q+GSFFYFPSLH QRASGG+GGFIINNRA+I IPFDTP GDI ILIGDWY RNHTALRK
Sbjct: 121 QIGSFFYFPSLHMQRASGGYGGFIINNRAVISIPFDTPHGDIVILIGDWYKRNHTALRKA 180
Query: 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNF 239
LDAGK LGMPDGVLINGKGPYQYNTTLVPDGIDYETIEV PGKTYR+RVHNVG STSLNF
Sbjct: 181 LDAGKDLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVQPGKTYRLRVHNVGTSTSLNF 240
Query: 240 RIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQ 299
RIQNHNLLLAE+EGSYTVQQNYTSLDIHVGQS+SFLVTMDQNAS+DYYIVASARFVNESQ
Sbjct: 241 RIQNHNLLLAESEGSYTVQQNYTSLDIHVGQSFSFLVTMDQNASSDYYIVASARFVNESQ 300
Query: 300 WKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 359
W+RVTGVA+LHYTNSKGKA+GPLP+ PNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF
Sbjct: 301 WRRVTGVAVLHYTNSKGKAKGPLPDAPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSF 360
Query: 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTK 419
RYGSINVTEVY+L+NKPP I+GK+R TLSGISFVNPSTPIRLAD FKVKG YKLDFPTK
Sbjct: 361 RYGSINVTEVYLLKNKPPVTINGKKRTTLSGISFVNPSTPIRLADQFKVKGVYKLDFPTK 420
Query: 420 PVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTY 479
P+TGPP+METSVINGTYRGFMEVILQNNDTKM +YHMSGYAFFVVGMDYGEW++NSRGTY
Sbjct: 421 PLTGPPKMETSVINGTYRGFMEVILQNNDTKMQSYHMSGYAFFVVGMDYGEWSENSRGTY 480
Query: 480 NKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKT 539
NKWDGIAR+T QVYPGAW AILVSLDNVG+WNLRTENLDSWYLGQETYVRVVNPEATNKT
Sbjct: 481 NKWDGIARSTVQVYPGAWAAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEATNKT 540
Query: 540 EFPIPDNALFCGALSHLQKPEDISA-ATAITGDRLKMFFTLLMTMCAMLVLF 590
E P+P+NAL+CGALS LQKP+DIS+ A +I GDR K+ F LLM A++ +F
Sbjct: 541 ELPLPENALYCGALSKLQKPQDISSFAVSIKGDRSKLLFALLMIASAVMSIF 592
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449459706|ref|XP_004147587.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Cucumis sativus] gi|449531440|ref|XP_004172694.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/571 (87%), Positives = 535/571 (93%)
Query: 21 CSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESL 80
SAAD F +FDFEVSYITASPLGVPQQVIAING+FPGPT+NVTTNNNVV+NVRNKLDES+
Sbjct: 22 SSAADPFAFFDFEVSYITASPLGVPQQVIAINGEFPGPTVNVTTNNNVVINVRNKLDESM 81
Query: 81 LIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFG 140
L+HWSG+QQRRSSWQDG+ GTNCPIPPKWNWTYQFQVKDQ+GSFFYFPSLHFQRASGGFG
Sbjct: 82 LMHWSGVQQRRSSWQDGVPGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLHFQRASGGFG 141
Query: 141 GFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPY 200
G IINNR +IPIPF TPDGDITIL+GDWYTRNHTALRK+LD GK LGMP GVLINGKGPY
Sbjct: 142 GIIINNRDVIPIPFSTPDGDITILMGDWYTRNHTALRKSLDDGKDLGMPHGVLINGKGPY 201
Query: 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260
+YN TLVPDGID+ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN
Sbjct: 202 RYNDTLVPDGIDHETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 261
Query: 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARG 320
YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES WKRVTGVAILHY+NSKGKA G
Sbjct: 262 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLWKRVTGVAILHYSNSKGKAAG 321
Query: 321 PLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMI 380
PLPE P DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT+VYVL+NKPP I
Sbjct: 322 PLPEAPKDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDVYVLKNKPPVSI 381
Query: 381 DGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFM 440
+GK R TLSGISFVNPSTPIRLAD FK+KG YKLDFPT+P+TGPP+ ETSVINGTYRGFM
Sbjct: 382 NGKMRTTLSGISFVNPSTPIRLADQFKLKGVYKLDFPTRPLTGPPKAETSVINGTYRGFM 441
Query: 441 EVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500
EVILQNNDTKM +YHM+GYAFFVVGMDYGEW++NSRGTYNKWDGIAR+T QVYPGAWTAI
Sbjct: 442 EVILQNNDTKMQSYHMNGYAFFVVGMDYGEWSENSRGTYNKWDGIARSTIQVYPGAWTAI 501
Query: 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPE 560
LVSLDNVGIWN+RTENLDSWYLGQETYVRVVNPEATNKTE P+PDNALFCG L LQKP+
Sbjct: 502 LVSLDNVGIWNIRTENLDSWYLGQETYVRVVNPEATNKTELPMPDNALFCGQLGKLQKPQ 561
Query: 561 DISAATAITGDRLKMFFTLLMTMCAMLVLFH 591
DIS+AT+ITGDRLKM FTLLM + ++
Sbjct: 562 DISSATSITGDRLKMLFTLLMIISTVICALQ 592
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426946|ref|XP_002266352.1| PREDICTED: monocopper oxidase-like protein SKU5 [Vitis vinifera] gi|297741153|emb|CBI31884.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1007 bits (2603), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/592 (85%), Positives = 544/592 (91%), Gaps = 2/592 (0%)
Query: 1 MALCRGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTI 60
MA L L IHIALL S C A D FV+FDFEVSYITASPLGVPQQVIAINGKFPGP +
Sbjct: 1 MASSGFLGLSLIHIALLLSFCFAEDPFVHFDFEVSYITASPLGVPQQVIAINGKFPGPVV 60
Query: 61 NVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQ 120
N TTNNNVVVNVRNKLDE+LLI WSGIQQRRSSWQDG+ GTNCPIPPKWNWTYQFQVKDQ
Sbjct: 61 NATTNNNVVVNVRNKLDENLLITWSGIQQRRSSWQDGVPGTNCPIPPKWNWTYQFQVKDQ 120
Query: 121 VGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180
+GSFFYFPSL+FQRA+GG+GGFIINNRAIIPIPF TPDGDITI+IGDWYT+NHT LRKTL
Sbjct: 121 IGSFFYFPSLNFQRAAGGYGGFIINNRAIIPIPFATPDGDITIMIGDWYTKNHTDLRKTL 180
Query: 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFR 240
+ GK LGMP+GVLINGKGPY+YNTTLVP+GIDYETI+V PGKTYRIRVHNVG+STSLNFR
Sbjct: 181 NGGKELGMPNGVLINGKGPYRYNTTLVPEGIDYETIDVQPGKTYRIRVHNVGVSTSLNFR 240
Query: 241 IQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQW 300
IQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES W
Sbjct: 241 IQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESLW 300
Query: 301 KRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFR 360
KRVTGVAIL Y+NSKGKA GPLP+ PNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFR
Sbjct: 301 KRVTGVAILRYSNSKGKASGPLPDPPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFR 360
Query: 361 YGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420
YGSINVT+VYVL+NKPP IDGK R TLSGISFVNP+TPIRLAD FKVKG YKLDFP P
Sbjct: 361 YGSINVTDVYVLKNKPPVTIDGKMRTTLSGISFVNPTTPIRLADQFKVKGVYKLDFPKTP 420
Query: 421 VTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYN 480
+TG PRMETSVINGTYRGFMEVILQNNDTKM +YHM+GYAFFVVGMDYGEWT+NSRGTYN
Sbjct: 421 LTGSPRMETSVINGTYRGFMEVILQNNDTKMQSYHMNGYAFFVVGMDYGEWTENSRGTYN 480
Query: 481 KWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTE 540
KWDGIAR+TTQV+PGAWTAIL+SLDNVG+WNLR ENLDSW+LGQETYVRVVNPEATNKTE
Sbjct: 481 KWDGIARSTTQVFPGAWTAILISLDNVGVWNLRAENLDSWHLGQETYVRVVNPEATNKTE 540
Query: 541 FPIPDNALFCGALSHLQKPED-ISAATAITGDRLKMFFTLLMTMCAMLVLFH 591
P+PDNALFCGALS +QKP+D S+ T+I+G +L +FFTLLM + A + FH
Sbjct: 541 LPMPDNALFCGALSKMQKPQDITSSTTSISGSKLSIFFTLLM-IYAAISTFH 591
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563298|ref|XP_003549901.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/577 (84%), Positives = 532/577 (92%), Gaps = 1/577 (0%)
Query: 9 LLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNV 68
I+++LL +L SAAD FV ++FEVSYITASPLGVPQQVIAIN KFPGP INVTTNNNV
Sbjct: 10 FFLINVSLLLTLSSAADPFVSYEFEVSYITASPLGVPQQVIAINNKFPGPIINVTTNNNV 69
Query: 69 VVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFP 128
VNVRNKLDESLLIHWSGIQQRRSSWQDG+LGTNCPIP KWNWTYQFQVKDQ+GSFFYFP
Sbjct: 70 AVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPAKWNWTYQFQVKDQIGSFFYFP 129
Query: 129 SLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGM 188
SLH QRA+GGFGGFIINNRAIIPIPFDTP GDI + IGDWYTRNHT LRK LD GK LGM
Sbjct: 130 SLHLQRAAGGFGGFIINNRAIIPIPFDTPHGDIVVFIGDWYTRNHTDLRKALDDGKDLGM 189
Query: 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL 248
PDGVLINGKGPY+YN TLVPDGIDYETIEVHPGKTYR+RVHNVG+STSLNFRIQ+HNLLL
Sbjct: 190 PDGVLINGKGPYRYNNTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLL 249
Query: 249 AETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAI 308
AETEGSYTVQQNYTSLDIHVGQSYSFL++ DQNASTDYYIVASARFVNES+W+RVTGVAI
Sbjct: 250 AETEGSYTVQQNYTSLDIHVGQSYSFLLSTDQNASTDYYIVASARFVNESRWQRVTGVAI 309
Query: 309 LHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTE 368
L YTNSKGKARGPLP P+D+FDKT+SMNQARSIRWNVSASGARPNPQGSFRYGSINVT+
Sbjct: 310 LRYTNSKGKARGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTD 369
Query: 369 VYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428
+YVL+NKP E I+GKRRATLSG SFVNPSTPIRLAD +K+KG YKLDFPTKP+TG PR E
Sbjct: 370 IYVLKNKPLEKINGKRRATLSGNSFVNPSTPIRLADQYKLKGVYKLDFPTKPLTGSPRTE 429
Query: 429 TSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIART 488
TSVINGTYRGFME+ILQNNDTKMH YHMSGYAFFVVGMD+G+W++NSRGTYNKWDGIART
Sbjct: 430 TSVINGTYRGFMEIILQNNDTKMHTYHMSGYAFFVVGMDFGDWSENSRGTYNKWDGIART 489
Query: 489 TTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNAL 548
T QVYPGAWTAILVSLDNVG+WNLRTENLDSWYLGQETYVRVVNPE NKTE PIPDNAL
Sbjct: 490 TAQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVNNKTELPIPDNAL 549
Query: 549 FCGALSHLQKPEDISA-ATAITGDRLKMFFTLLMTMC 584
FCGALS LQKP+ +S+ A +I+ ++LK+FFT L+
Sbjct: 550 FCGALSKLQKPQKVSSDAPSISRNKLKLFFTWLIVFA 586
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357476949|ref|XP_003608760.1| Monocopper oxidase-like protein SKU5 [Medicago truncatula] gi|355509815|gb|AES90957.1| Monocopper oxidase-like protein SKU5 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/585 (81%), Positives = 536/585 (91%)
Query: 7 LSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNN 66
L L I+I L +L A D FV ++FEVSYITASPLGVPQQVIAIN +FPGPTINVTTNN
Sbjct: 6 LFLFLINIFFLLTLSYAEDAFVPYEFEVSYITASPLGVPQQVIAINKQFPGPTINVTTNN 65
Query: 67 NVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFY 126
NV VNV NKLDE+LLIHWSG+QQRRSSWQDG+LGTNCPIPPKWNWTYQFQVKDQ+GSFFY
Sbjct: 66 NVAVNVHNKLDENLLIHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFY 125
Query: 127 FPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGL 186
FPSL+FQRA+GGFGGFIINNR +I +PFDTP+GDI + IGDWYTRNHTALRK LD GK L
Sbjct: 126 FPSLNFQRAAGGFGGFIINNRPVISVPFDTPEGDIVVFIGDWYTRNHTALRKALDDGKDL 185
Query: 187 GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNL 246
GMPDGVLINGKGPY+YN TLVP+GID+E I+V PGKTYR+RVHNVGISTSLNFRIQNHNL
Sbjct: 186 GMPDGVLINGKGPYRYNDTLVPEGIDFEQIDVKPGKTYRLRVHNVGISTSLNFRIQNHNL 245
Query: 247 LLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGV 306
LLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNAS+DYYIVASARFVNES+W+RVTGV
Sbjct: 246 LLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGV 305
Query: 307 AILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINV 366
ILHY+NSKGKARG LP GP+D+FDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINV
Sbjct: 306 GILHYSNSKGKARGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINV 365
Query: 367 TEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPR 426
TE+YVL+NKPP IDGKRRATLSGISF NP+TPIRLAD +K+KG YKLDFPTKP+TG PR
Sbjct: 366 TEIYVLKNKPPVKIDGKRRATLSGISFANPATPIRLADHYKLKGVYKLDFPTKPLTGSPR 425
Query: 427 METSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIA 486
+ETSVING++RGFME+ILQNNDTKMH YH+SGYAFFVVGMD+G+W++NSRGTYNKWDGIA
Sbjct: 426 VETSVINGSFRGFMEIILQNNDTKMHTYHLSGYAFFVVGMDFGDWSENSRGTYNKWDGIA 485
Query: 487 RTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDN 546
R+T QVYPGAWTA+LVSLDNVG+WNLRTENLDSWYLGQETY+RVVNPE TNKTE P+PDN
Sbjct: 486 RSTAQVYPGAWTAVLVSLDNVGVWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDN 545
Query: 547 ALFCGALSHLQKPEDISAATAITGDRLKMFFTLLMTMCAMLVLFH 591
AL CG L HLQKP+ I ++ +I G+ LK+ FTL+M +CA++ +F
Sbjct: 546 ALKCGRLQHLQKPQKIISSASINGNGLKLLFTLVMFVCAIINIFQ 590
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514216|ref|XP_003525802.1| PREDICTED: monocopper oxidase-like protein SKU5-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/571 (85%), Positives = 533/571 (93%), Gaps = 1/571 (0%)
Query: 12 IHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVN 71
I+++LL +L SAAD FV ++FEVSYITASPLGVPQQVIAIN KFPGPTINVTTNNNV VN
Sbjct: 18 INVSLLLTLSSAADPFVSYEFEVSYITASPLGVPQQVIAINNKFPGPTINVTTNNNVAVN 77
Query: 72 VRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131
VRNKLDESLLIHWSGIQQRR+SWQDG+LGTNCPIP KWNWTYQFQVKDQ+GSFFYFPSLH
Sbjct: 78 VRNKLDESLLIHWSGIQQRRTSWQDGVLGTNCPIPAKWNWTYQFQVKDQIGSFFYFPSLH 137
Query: 132 FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDG 191
QRA+GGFGGFIINNR IIPIPFDTP GDI + IGDWYTRNHT LRK LD GK LGMPDG
Sbjct: 138 LQRAAGGFGGFIINNRPIIPIPFDTPHGDIVVFIGDWYTRNHTDLRKALDDGKDLGMPDG 197
Query: 192 VLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET 251
VLINGKGPY+YN TLVPDGIDYETIEVHPGKTYR+RVHNVG+STSLNFRIQ+HNLLLAET
Sbjct: 198 VLINGKGPYRYNDTLVPDGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAET 257
Query: 252 EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY 311
EGSYTVQQNYTSLDIHVGQSYSFL++ DQNASTDYYIVASARFVNES+W+RVTGVAIL Y
Sbjct: 258 EGSYTVQQNYTSLDIHVGQSYSFLLSTDQNASTDYYIVASARFVNESRWQRVTGVAILRY 317
Query: 312 TNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYV 371
TNSKGKARGPLP GP+D+FDKT+SMNQARSIRWNVSASGARPNPQGSFRYGSINVT++YV
Sbjct: 318 TNSKGKARGPLPPGPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTDIYV 377
Query: 372 LRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSV 431
L+NKP E I+GK+RATLSG SFVNPSTPIRLAD +K+KG YKLDFPTKP+TG PR ETS+
Sbjct: 378 LKNKPLEKINGKQRATLSGNSFVNPSTPIRLADQYKLKGVYKLDFPTKPLTGSPRTETSI 437
Query: 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQ 491
INGTYRGFMEVILQNNDTKMH YHMSGYAFFVVGMD+G+W++NSRGTYNKWDGIARTT Q
Sbjct: 438 INGTYRGFMEVILQNNDTKMHTYHMSGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQ 497
Query: 492 VYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCG 551
VYPGAWTAILVSLDNVG+WNLRTENLDSWYLGQETYVRVVNPE NKTE PIPDNALFCG
Sbjct: 498 VYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVNNKTELPIPDNALFCG 557
Query: 552 ALSHLQKPEDISA-ATAITGDRLKMFFTLLM 581
ALS LQKP+ +S+ A +ITG++LK+ FT L+
Sbjct: 558 ALSKLQKPQKVSSDAPSITGNKLKLLFTWLV 588
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297813775|ref|XP_002874771.1| hypothetical protein ARALYDRAFT_911635 [Arabidopsis lyrata subsp. lyrata] gi|297320608|gb|EFH51030.1| hypothetical protein ARALYDRAFT_911635 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/549 (83%), Positives = 501/549 (91%)
Query: 19 SLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE 78
S C AAD + +++FEVSYITASPLGVPQQVIAINGKFPGPTINVTTN N+VVNVRNKLDE
Sbjct: 16 SFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVVNVRNKLDE 75
Query: 79 SLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGG 138
LL+HW+GIQQRR SWQDG+LGTNCPIPPKWNWTY+FQVKDQ+GSFFYFPSLHFQ+ASGG
Sbjct: 76 GLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQKASGG 135
Query: 139 FGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKG 198
FG FI+N RAIIP+PF TPDGDIT+ IGDWY RNHTALRK LD GK LGMPDGVLINGKG
Sbjct: 136 FGSFIVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKG 195
Query: 199 PYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
PY+YN TLV DGID+ETI VHPGKTYR+RV NVGISTSLNFRIQ HNL+LAE+EGSYTVQ
Sbjct: 196 PYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQ 255
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
QNYTSLDIHVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV ILHYTNSKGKA
Sbjct: 256 QNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILHYTNSKGKA 315
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
+G LP GP DEFDKTFSMNQARSIRWNVSASGARPNPQGSF+YGSINVT+VYVLRN PP
Sbjct: 316 KGHLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPV 375
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
I+GKRR TL+GISF NPSTPIRLAD FKVK YKLDFP +P+TGP ++ETS+INGTYRG
Sbjct: 376 TINGKRRTTLNGISFKNPSTPIRLADKFKVKDVYKLDFPKRPLTGPAKVETSIINGTYRG 435
Query: 439 FMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498
FMEV+LQNNDTKM +YHMSGYAFFVVGMDYGEWT+NSRGTYNKWDGIAR+T QVYPGAW+
Sbjct: 436 FMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWS 495
Query: 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQK 558
AIL+S+DN G WNLRTENLDSWYLGQETYVRVVNP+ NKTEF PDN L+CGALS LQK
Sbjct: 496 AILISMDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCGALSKLQK 555
Query: 559 PEDISAATA 567
P+ IS++ +
Sbjct: 556 PQKISSSAS 564
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15234551|ref|NP_192979.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] gi|334186448|ref|NP_001190704.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] gi|38258655|sp|Q9SU40.1|SKU5_ARATH RecName: Full=Monocopper oxidase-like protein SKU5; AltName: Full=Skewed roots; Flags: Precursor gi|18158154|gb|AAL62306.1|AF439406_1 multi-copper oxidase-related protein [Arabidopsis thaliana] gi|4725941|emb|CAB41712.1| putative pollen-specific protein [Arabidopsis thaliana] gi|7267944|emb|CAB78285.1| putative pollen-specific protein [Arabidopsis thaliana] gi|332657728|gb|AEE83128.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] gi|332657729|gb|AEE83129.1| Monocopper oxidase-like protein SKU5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/549 (82%), Positives = 497/549 (90%)
Query: 19 SLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE 78
S C AAD + +++FEVSYITASPLGVPQQVIAINGKFPGPTINVTTN N+VVNVRNKLDE
Sbjct: 16 SFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVVNVRNKLDE 75
Query: 79 SLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGG 138
LL+HW+GIQQRR SWQDG+LGTNCPIPPKWNWTY+FQVKDQ+GSFFYFPSLHFQRASGG
Sbjct: 76 GLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGG 135
Query: 139 FGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKG 198
FG F++N RAIIP+PF TPDGDIT+ IGDWY RNHTALRK LD GK LGMPDGVLINGKG
Sbjct: 136 FGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKG 195
Query: 199 PYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
PY+YN TLV DGID+ETI VHPGKTYR+RV NVGISTSLNFRIQ HNL+LAE+EGSYTVQ
Sbjct: 196 PYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQ 255
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
QNYTSLDIHVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV IL YTNSKGKA
Sbjct: 256 QNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKA 315
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
+G LP GP DEFDKTFSMNQARSIRWNVSASGARPNPQGSF+YGSINVT+VYVLRN PP
Sbjct: 316 KGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPV 375
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
I GKRR TL+GISF NPSTPIRLAD KVK YKLDFP +P+TGP ++ TS+INGTYRG
Sbjct: 376 TISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRG 435
Query: 439 FMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498
FMEV+LQNNDTKM +YHMSGYAFFVVGMDYGEWT+NSRGTYNKWDGIAR+T QVYPGAW+
Sbjct: 436 FMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWS 495
Query: 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQK 558
AIL+SLDN G WNLRTENLDSWYLGQETYVRVVNP+ NKTEF PDN L+CGALS LQK
Sbjct: 496 AILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCGALSKLQK 555
Query: 559 PEDISAATA 567
P+ +S++ +
Sbjct: 556 PQKVSSSAS 564
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 591 | ||||||
| TAIR|locus:2135535 | 587 | SKU5 [Arabidopsis thaliana (ta | 0.950 | 0.957 | 0.786 | 7.1e-251 | |
| TAIR|locus:2122689 | 589 | SKS1 "SKU5 similar 1" [Arabido | 0.949 | 0.952 | 0.661 | 4.8e-213 | |
| TAIR|locus:2153107 | 592 | SKS2 "SKU5 similar 2" [Arabido | 0.952 | 0.951 | 0.643 | 5.7e-210 | |
| TAIR|locus:2121823 | 549 | sks9 "SKU5 similar 9" [Arabido | 0.857 | 0.923 | 0.490 | 2.3e-133 | |
| TAIR|locus:2092845 | 554 | sks11 "SKU5 similar 11" [Arabi | 0.879 | 0.938 | 0.464 | 7.9e-133 | |
| TAIR|locus:2193894 | 555 | sks12 "SKU5 similar 12" [Arabi | 0.881 | 0.938 | 0.465 | 1.6e-132 | |
| TAIR|locus:2092865 | 551 | sks13 "SKU5 similar 13" [Arabi | 0.873 | 0.936 | 0.453 | 1.4e-128 | |
| TAIR|locus:2193899 | 549 | sks14 "SKU5 similar 14" [Arabi | 0.879 | 0.947 | 0.446 | 3.6e-128 | |
| TAIR|locus:2005594 | 545 | sks18 "SKU5 similar 18" [Arabi | 0.849 | 0.921 | 0.440 | 1.6e-116 | |
| TAIR|locus:2132927 | 547 | sks10 "SKU5 similar 10" [Arabi | 0.849 | 0.917 | 0.429 | 3.2e-104 |
| TAIR|locus:2135535 SKU5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2416 (855.5 bits), Expect = 7.1e-251, P = 7.1e-251
Identities = 446/567 (78%), Positives = 493/567 (86%)
Query: 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
+ +++FEVSYITASPLGVPQQVIAINGKFPGPTI RNKLDE LL+HW+G
Sbjct: 24 YSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNENLVVNVRNKLDEGLLLHWNG 83
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
IQQRR SWQDG+LGTNCPIPPKWNWTY+FQVKDQ+GSFFYFPSLHFQRASGGFG F++N
Sbjct: 84 IQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFFYFPSLHFQRASGGFGSFVVNP 143
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
RAIIP+PF TPDGDIT+ IGDWY RNHTALRK LD GK LGMPDGVLINGKGPY+YN TL
Sbjct: 144 RAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKGPYRYNDTL 203
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
V DGID+ETI VHPGKTYR+RV NVGISTSLNFRIQ HNL+LAE+EGSYTVQQNYTSLDI
Sbjct: 204 VADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDI 263
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV IL YTNSKGKA+G LP GP
Sbjct: 264 HVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGP 323
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
DEFDKTFSMNQARSIRWNVSASGARPNPQGSF+YGSINVT+VYVLRN PP I GKRR
Sbjct: 324 QDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRT 383
Query: 387 TLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQN 446
TL+GISF NPSTPIRLAD KVK YKLDFP +P+TGP ++ TS+INGTYRGFMEV+LQN
Sbjct: 384 TLNGISFKNPSTPIRLADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQN 443
Query: 447 NDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506
NDTKM +YHMSGYAFFVVGMDYGEWT+NSRGTYNKWDGIAR+T QVYPGAW+AIL+SLDN
Sbjct: 444 NDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDN 503
Query: 507 VGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDIS--A 564
G WNLRTENLDSWYLGQETYVRVVNP+ NKTEF PDN L+CGALS LQKP+ +S A
Sbjct: 504 PGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCGALSKLQKPQKVSSSA 563
Query: 565 ATAITGDRLKMFFTLLMTMCAMLVLFH 591
+ +I L M ++M + M++L H
Sbjct: 564 SKSIGFTSLSM---VVMALVMMMMLQH 587
|
|
| TAIR|locus:2122689 SKS1 "SKU5 similar 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2059 (729.9 bits), Expect = 4.8e-213, P = 4.8e-213
Identities = 373/564 (66%), Positives = 452/564 (80%)
Query: 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
FV +DF VSY+TASPLGVPQQVIA+NG+FPGP + N LDE LL+ W G
Sbjct: 28 FVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNATTNYNVVVNVFNHLDEPLLLTWPG 87
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
IQ RR+SWQDG+LGTNCPIPP+WN+TYQFQVKDQ+GSFFY PSL+FQRASGGFG +INN
Sbjct: 88 IQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVINN 147
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R IIPIPF PDG++ +IGDWYT++H ALR+ LD+GK LGMPDGVLINGKGPY+YN++
Sbjct: 148 RDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSGKELGMPDGVLINGKGPYKYNSS- 206
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
VPDGIDY T V PGKTYRIRVHNVGISTSLNFRIQNH+LLL ETEG YT Q N+T D+
Sbjct: 207 VPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDV 266
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQSYSFLVTMDQ+A++DYYIVASARFVNE+ W+RVTGVAILHY+NSKG GPLP
Sbjct: 267 HVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPK 326
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
D +M+Q ++IR N SASGARPNPQGSF YG IN+T Y+LR+ PP +I+G RA
Sbjct: 327 TDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRA 386
Query: 387 TLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQN 446
TL+GISFVNPSTP+RLAD KVKGAYKLDFP +P P R++ S+IN TY+GF++V+ QN
Sbjct: 387 TLNGISFVNPSTPVRLADRNKVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQN 446
Query: 447 NDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506
NDTK+ ++H+ GY+FFVVGMD+G W+++ +G+YN WD I+R+T +VYPG WTA+L+SLDN
Sbjct: 447 NDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDN 506
Query: 507 VGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDISAAT 566
VG+WN+R ENLD WYLG+ETY+R+ NPE KTE PDN L+CGAL +LQK + SAAT
Sbjct: 507 VGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCGALKNLQKEQHHSAAT 566
Query: 567 AITGDRLKMFFTLLMTMCAMLVLF 590
+I LK+ LLM + A + F
Sbjct: 567 SILNGHLKLM--LLMVLLASVFRF 588
|
|
| TAIR|locus:2153107 SKS2 "SKU5 similar 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2030 (719.7 bits), Expect = 5.7e-210, P = 5.7e-210
Identities = 364/566 (64%), Positives = 450/566 (79%)
Query: 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
+V +DF +SYITASPLGVPQQVIA+NGKFPGP I N LDE LL+ W G
Sbjct: 27 YVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDEPLLLTWPG 86
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
+Q RR+SWQDG+LGTNCPIPP WN+TY FQ+KDQ+GS+FY PSL+FQRASGGFG IINN
Sbjct: 87 VQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFGALIINN 146
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R ++PIPF PDG+I +IGDWYT+NHTALR+ LD+GK LGMPDGVLINGKGP++YN++
Sbjct: 147 RDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLINGKGPFKYNSS- 205
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
VPDGI++ET+ V PGKTYRIRVHNVGISTSLNFRIQNH LLL ETEG YT Q N+T D+
Sbjct: 206 VPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDV 265
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQSYSFLVTMDQNA++DYYIVASARFVNE+ W+RVTGV ILHY+NSKG A GPLP
Sbjct: 266 HVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSA 325
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
D +MNQ R+I+ N SASGARPNPQGSF YG IN+T Y+LR+ PP I+GK RA
Sbjct: 326 TDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRA 385
Query: 387 TLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGP-PRMETSVINGTYRGFMEVILQ 445
TL+GISFVNPSTP+RLAD KVKG Y LDFP +P+ PR+ +S+IN TY+GF++VI Q
Sbjct: 386 TLNGISFVNPSTPMRLADDHKVKGDYMLDFPDRPLDEKLPRLSSSIINATYKGFIQVIFQ 445
Query: 446 NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD 505
NNDTK+ ++H+ GYAF+VV MD+G W+++ +YN WD +AR+T +VYPGAWTA+L+SLD
Sbjct: 446 NNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLD 505
Query: 506 NVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDISAA 565
NVG+WN+R ENLD WYLGQETY+R++NPE TE P+N ++CGAL +QK + S+A
Sbjct: 506 NVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCGALQAMQKEQHHSSA 565
Query: 566 T-AITGDRLKMFFTLLMTMCAMLVLF 590
T ++T +L + F+++M + + F
Sbjct: 566 TKSMTNGQLILIFSMMMVLLSSFSSF 591
|
|
| TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1307 (465.1 bits), Expect = 2.3e-133, P = 2.3e-133
Identities = 262/534 (49%), Positives = 350/534 (65%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQ 88
+FD+ V+Y SPLG+PQ+ I ING++PGP I N LDE L+ W+G+Q
Sbjct: 31 FFDWRVTYGNISPLGIPQRGILINGQYPGPDIYSVTNDNLIINVHNDLDEPFLLSWNGVQ 90
Query: 89 QRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148
R++S+QDG+ GT CPIPP N+TY QVKDQ+GSFFYFPSL +A+GGFGGF I +R
Sbjct: 91 LRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFYFPSLAVHKAAGGFGGFRILSRP 150
Query: 149 IIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVP 208
IP+PF P GD T LIGDW+ +H L+ LD G L +P GVLING+G
Sbjct: 151 RIPVPFPEPAGDFTFLIGDWFKHDHKVLKAILDRGHKLPLPQGVLINGQG---------- 200
Query: 209 DGIDY-ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267
+ Y +I VH GKTYR R+ NVG+ +LNFRIQ H + L E EG++TVQ YTSLDIH
Sbjct: 201 --VSYMSSITVHKGKTYRFRISNVGLQHTLNFRIQGHQMKLVEVEGTHTVQSMYTSLDIH 258
Query: 268 VGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK----GKARGPLP 323
VGQSYS LVTMDQ DY IV S +FV K++ + +HY+NS+ A
Sbjct: 259 VGQSYSVLVTMDQ-PDQDYDIVVSTKFVA----KKLLVSSTIHYSNSRHSHSSSANSVHV 313
Query: 324 EGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGK 383
+ P DE D +S+ QARSIR N++ASG RPNPQGS+ YG I ++ +L + ++ K
Sbjct: 314 QQPADELD--WSIKQARSIRTNLTASGPRPNPQGSYHYGRIKISRTLILESSAA-LVKRK 370
Query: 384 RRATLSGISFVNPSTPIRLADWFKVKGAYKL-DFPTKPVTGPP-RMETSVINGTYRGFME 441
+R ++G+SFV TP++LAD+FK+KG +K+ P KP G RMETSV+ +R F+E
Sbjct: 371 QRYAINGVSFVPGDTPLKLADYFKIKGVFKMGSIPDKPRRGRGMRMETSVMGAHHRDFLE 430
Query: 442 VILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501
+I QN + + +YH+ GY+F+VVG D G W+ SR YN D I+R+TTQVYP +WTA+
Sbjct: 431 IIFQNREKIVQSYHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRSTTQVYPESWTAVY 490
Query: 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555
V+LDNVG+WNLR+E YLGQ+ Y+RV +P + + E+ +P NAL CG S+
Sbjct: 491 VALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLCGRASN 544
|
|
| TAIR|locus:2092845 sks11 "SKU5 similar 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 253/545 (46%), Positives = 350/545 (64%)
Query: 29 YFD--FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
YF + V+Y T SPLGVPQQVI ING+FPGP + N LDE L+ W+G
Sbjct: 27 YFHHVWNVTYGTVSPLGVPQQVILINGQFPGPNVNSTSNNNVIINVFNNLDEPFLLTWNG 86
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
IQ R++ WQDG GT CPI P N+TY FQ KDQ+GS+FY+PS R++GGFGG +N+
Sbjct: 87 IQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPSTAMHRSAGGFGGLRVNS 146
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R +IP+P+ P+ D T+LIGDWYT++HT L+K LD+G+ LG PDG+LINGK
Sbjct: 147 RLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDSGRTLGRPDGILINGKSGKG----- 201
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
DG D + PGKTYR+R+ NVG+ TSLNFRIQNH L L E EGS+ +Q +Y SLD+
Sbjct: 202 --DGSDAPLFTLKPGKTYRVRICNVGLKTSLNFRIQNHKLKLVEMEGSHVLQNDYDSLDV 259
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQ Y ++T +Q A DYY+VAS+RF+ +T +L Y KG A LP GP
Sbjct: 260 HVGQCYGTILTANQEAK-DYYMVASSRFLKSV----ITTTGLLRYEGGKGPASSQLPPGP 314
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
+S+NQ RS RWN++AS ARPNPQGS+ YG IN+T L N + +DGK R
Sbjct: 315 ---VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKLRY 370
Query: 387 TLSGISFVNPSTPIRLADWFKVKG-AYKLDFPTKPVTGPPRMET-----SVINGTYRGFM 440
L+G+S +P TP++LA++F V +K D T T P ++++ +V+N T+R F+
Sbjct: 371 ALNGVSHTDPETPLKLAEYFGVADKVFKYDSITDNPT-PEQIKSIKIVPNVLNITHRTFI 429
Query: 441 EVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500
EV+ +N++ + ++H+ GY+FF V ++ G WT R YN D ++R T QVYP W AI
Sbjct: 430 EVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAI 489
Query: 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPE 560
L++ DN G+WN+R+EN + YLGQ+ Y V++PE + + E+ +P+ +L CG + KP
Sbjct: 490 LLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPN 549
Query: 561 DISAA 565
+ A
Sbjct: 550 PYAGA 554
|
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| TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
Identities = 253/544 (46%), Positives = 345/544 (63%)
Query: 29 YFD--FEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
YF + V+Y TASPLGVPQQVI ING+FPGP I N LDE LI W+G
Sbjct: 28 YFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIVNVFNNLDEPFLITWAG 87
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
IQ R++ WQDG GT CPIPP N+TY FQ KDQ+GS+FY+P+ RA+GGFGG +N+
Sbjct: 88 IQHRKNCWQDGTAGTMCPIPPGQNFTYHFQPKDQIGSYFYYPTTAMHRAAGGFGGLRVNS 147
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R +IP+P+ P+ D TILI DWYT++HT L+K LD+G+ +G PDG+LINGK T
Sbjct: 148 RLLIPVPYADPEDDYTILINDWYTKSHTQLKKFLDSGRTIGRPDGILINGKS----GKT- 202
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
DG D + PGKTYR+R+ NVG+ SLNFRIQNH + L E EGS+ +Q +Y SLD+
Sbjct: 203 --DGSDKPLFTLKPGKTYRVRICNVGLKASLNFRIQNHKMKLVEMEGSHVLQNDYDSLDV 260
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQ + +VT DQ DYY++AS RF+ K +T +L Y KG A LP P
Sbjct: 261 HVGQCFGVIVTADQEPK-DYYMIASTRFLK----KPLTTTGLLRYEGGKGPASSQLPAAP 315
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
+S+NQ RS RWN++AS ARPNPQGS+ YG IN+T L N + +DGK R
Sbjct: 316 ---VGWAWSLNQYRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGK-VDGKLRY 371
Query: 387 TLSGISFVNPSTPIRLADWFKVKG-AYKLDF----PTKPVTGPPRMETSVINGTYRGFME 441
LSG+S +P TP++LA++F V +K D P ++E +V+N T+R F+E
Sbjct: 372 ALSGVSHTDPETPLKLAEYFGVADKVFKYDTISDNPNPDQIKNIKIEPNVLNITHRTFIE 431
Query: 442 VILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501
V+ +N++ + ++H+ GY+FF V ++ G WT R YN D ++R T QVYP W AIL
Sbjct: 432 VVFENHERSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAIL 491
Query: 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPED 561
++ DN G+WN+R+EN + YLGQ+ Y V++PE + + E+ +P+ +L CG + K
Sbjct: 492 LTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNP 551
Query: 562 ISAA 565
+ A
Sbjct: 552 YAGA 555
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| TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 244/538 (45%), Positives = 348/538 (64%)
Query: 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
+ Y+ + V+Y TA+PLG+PQQVI ING+FPGP + N LDE L+ WSG
Sbjct: 26 YFYYTWNVTYGTAAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLLTWSG 85
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
+Q R++SWQDG+ GT+CPIP N+TY FQ KDQ+GS+FY+PS R +GGFGG +N+
Sbjct: 86 LQHRKNSWQDGVTGTSCPIPAGTNFTYHFQPKDQIGSYFYYPSTALHRFAGGFGGLRVNS 145
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R +IP+P+ P+ D TILI DWY ++HTAL+ LD+G+ LG PDGVLINGK + L
Sbjct: 146 RLLIPVPYADPEDDRTILINDWYAKSHTALKNFLDSGRTLGSPDGVLINGK-----SGKL 200
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
G + + PGKTY+ R+ NVG ++LNFRIQ H + L E EGS+ +Q +Y SLD+
Sbjct: 201 --GGNNAPLFTMKPGKTYKYRICNVGFKSTLNFRIQGHKMKLVEMEGSHVLQNDYDSLDV 258
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQ ++ LVT DQ A +YY+VAS RF+ K V+ V ++ Y S +A +P+ P
Sbjct: 259 HVGQCFAVLVTADQVAK-NYYMVASTRFLK----KEVSTVGVMSYEGSNVQASSDIPKAP 313
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
+S+NQ RS RWN++AS ARPNPQGS+ YG IN+T L N +++GK R
Sbjct: 314 ---VGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLANTK-NLVNGKVRF 369
Query: 387 TLSGISFVNPSTPIRLADWFKV-KGAYKL----DFPTKPVTGPPRMETSVINGTYRGFME 441
+G+S V+ TP++LA++F + + +K D P +T +E +V+N T+R F+E
Sbjct: 370 GFNGVSHVDTETPLKLAEYFGMSEKVFKYNVIKDEPAAKIT-TLTVEPNVLNITFRTFVE 428
Query: 442 VILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501
V+ +N++ M ++H+ GY+FF V + G WT R YN D ++R T QVYP +W+AIL
Sbjct: 429 VVFENHEKSMQSFHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAIL 488
Query: 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKP 559
++ DN G+WN+R+EN + YLGQ+ YV V++PE + + E+ IP N CG + L P
Sbjct: 489 LTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLP 546
|
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| TAIR|locus:2193899 sks14 "SKU5 similar 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 242/542 (44%), Positives = 350/542 (64%)
Query: 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSG 86
+ + + V+Y TASPLGVPQ+VI ING+FPGP + N LDE L+ WSG
Sbjct: 25 YFFHTWNVTYGTASPLGVPQKVILINGQFPGPNLNSTSNNNVVINVFNHLDEPFLLTWSG 84
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146
IQ R++ WQDG+ GT+CPIP N+TY FQ KDQ+GS+FY+P+ R +GGFGG +N+
Sbjct: 85 IQHRKNCWQDGVAGTSCPIPAGQNFTYHFQPKDQIGSYFYYPTTSLHRFAGGFGGLRVNS 144
Query: 147 RAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
R +IP+P+ P+ D T+L+GDWYT HTAL+ LD+G+ LG+P+GVLINGK
Sbjct: 145 RLLIPVPYADPEDDYTVLLGDWYTAGHTALKNFLDSGRTLGLPNGVLINGKSGKV----- 199
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
G + + PGKTY+ R+ NVG ++LNFRIQNH + L E EGS+ +Q +Y SLD+
Sbjct: 200 --GGKNEPLFTMKPGKTYKYRLCNVGFKSTLNFRIQNHKMKLVEMEGSHVIQNDYDSLDV 257
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
HVGQ +S LVT +Q A+ DYY+VAS RF+ K ++ V ++ Y S +A LP+ P
Sbjct: 258 HVGQCFSVLVTANQ-AAKDYYMVASTRFLK----KELSTVGVIRYEGSNVQASTELPKAP 312
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
+S+NQ RS RWN++++ ARPNPQGS+ YG IN+T L N ++DGK R
Sbjct: 313 ---VGWAWSLNQFRSFRWNLTSNAARPNPQGSYHYGKINITRSIKLVNSK-SVVDGKVRF 368
Query: 387 TLSGISFVNPSTPIRLADWFKV-KGAYKL----DFPTKPVTGPPRMETSVINGTYRGFME 441
+G+S V+ TP++LA++F++ + +K D P +T ++ +V+N T+R F+E
Sbjct: 369 GFNGVSHVDTETPLKLAEYFQMSEKVFKYNVIKDEPAAKITALT-VQPNVLNITFRTFVE 427
Query: 442 VILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501
+I +N++ M ++H+ GY+FF V + G WT R YN D ++R T QVYP +W+AIL
Sbjct: 428 IIFENHEKTMQSFHLDGYSFFAVASEPGRWTPEKRENYNLLDAVSRHTVQVYPKSWSAIL 487
Query: 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPED 561
++ DN G+WN+R+ENL+ YLG++ YV V++PE + + E+ IP N CG + L P
Sbjct: 488 LTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKGLPLPAH 547
Query: 562 IS 563
S
Sbjct: 548 YS 549
|
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| TAIR|locus:2005594 sks18 "SKU5 similar 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 235/534 (44%), Positives = 329/534 (61%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGIQQ 89
+ + VSY LG +QVI IN FPGP + N L E L+ W+G+Q
Sbjct: 29 YQWVVSYSQRFILGGNKQVIVINDMFPGPILNATANDIIVVNIFNNLPEPFLMTWNGLQL 88
Query: 90 RRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149
R++SWQDG+ GTNCPI P NWTY+FQVKDQ+GS+FYFP+L Q+A+GG+G I +
Sbjct: 89 RKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPTLLLQKAAGGYGAIRIYPPEL 148
Query: 150 IPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPD 209
+P+PF PD + ILIGDW+ +HT +R +LDAG L PDG+L NG+GP + T
Sbjct: 149 VPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPNPDGILFNGRGPEE--TFFA-- 204
Query: 210 GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVG 269
+E PGKTYR+R+ NVG+ T LNFRIQ+H++LL ETEG+Y ++ Y+SLDIHVG
Sbjct: 205 ---FE-----PGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVG 256
Query: 270 QSYSFLVTMDQNAS---TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
QSYS LVT + YYI A+ARF + + G+A++ Y G P+ +GP
Sbjct: 257 QSYSILVTAKTDPVGIYRSYYIFATARFTDSY----LGGIALIRYP---GSPLDPVGQGP 309
Query: 327 NDEFDKTF--SMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKR 384
+ F S+ QA SIR +++ AR NPQGS+ YG INVT +L N + GK
Sbjct: 310 LAPALQDFGSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVM-LSSGKL 368
Query: 385 RATLSGISFVNPSTPIRLADWFKVKGAYKLD-FPTKPVTGPPRMETSVINGTYRGFMEVI 443
R T++G+SFV P TP++L D F++ FP P P + TSV++ Y+ F+ ++
Sbjct: 369 RYTINGVSFVYPETPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFIHIV 428
Query: 444 LQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS 503
QN + +YH+ GY FFVVG +G W+++ + YN D ++R+T QVYP +WTAIL++
Sbjct: 429 FQNPLFGLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIA 488
Query: 504 LDNVGIWNLRTENLDSWYLGQETYVRVV-----NPEATN-KTEFPIPDNALFCG 551
+DN G+WN+R++ + WYLGQE Y+RV +P + E PIP N + CG
Sbjct: 489 MDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCG 542
|
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| TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 231/538 (42%), Positives = 321/538 (59%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTIXXXXXXXXXXXXRNKLDESLLIHWSGI 87
+++++ V+Y + +P++ I ING+FPGP I +N LD+ L+ W+G+
Sbjct: 28 LFYNWRVTYGKIALDTLPRRGILINGQFPGPEIRSLTNDNLVINVQNDLDDPFLLSWNGV 87
Query: 88 QQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147
R++S+QDG+ GTNCPIPP N+TY FQVKDQVGS+FYFPSL Q+A+GG+G I +
Sbjct: 88 HMRKNSYQDGVYGTNCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSL 147
Query: 148 AIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLG-MPDGVLINGKGPYQYNTTL 206
IP+PF P D T L+ DWY RNHT L+K LD G+ L MPDGV+ING+G +T+
Sbjct: 148 PRIPVPFPEPAEDFTFLVNDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGV----STV 203
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
Y +I V GKTYR RV NVG+ TSLN I H L L E EG++TVQ YTSLDI
Sbjct: 204 ------Y-SITVDKGKTYRFRVSNVGLQTSLNLEILGHQLKLIEVEGTHTVQTMYTSLDI 256
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGK----ARGPL 322
HVGQ+YSFLVTMDQ +Y IV S RF+N R T LHY+NSKG AR P
Sbjct: 257 HVGQTYSFLVTMDQPPQ-NYSIVVSTRFINAEVVIRAT----LHYSNSKGHKIITARRPD 311
Query: 323 PEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ---GSFRYGSINVTE--VYVLRNKPP 377
P D+ + + Q+ S P G + + E +++ K
Sbjct: 312 P----DDVEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQR 367
Query: 378 EMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437
I+G + + + + + ++ D FKV G D P + G R++T+V+ +
Sbjct: 368 YAINGV--SFVPSDTPLKLADHFKIKDVFKV-GTIP-DKPRRG--GGIRLDTAVMGAHHN 421
Query: 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAW 497
F+E+I QN + + +YH+ GY F+VVG++ G W+ SR YN D I+R+TTQVYP +W
Sbjct: 422 AFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPKSW 481
Query: 498 TAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555
TA+ V+LDNVG+WNLR++ YLGQ+ Y+RV +P + K E+P+P NAL CG S+
Sbjct: 482 TAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNALLCGRASN 539
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SU40 | SKU5_ARATH | No assigned EC number | 0.8251 | 0.9289 | 0.9352 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pg.C_LG_III0903 | hypothetical protein (592 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 591 | |||
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 0.0 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 0.0 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 0.0 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 0.0 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 0.0 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 0.0 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 4e-76 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 2e-65 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 7e-62 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 9e-60 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 1e-48 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 3e-44 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 5e-31 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 7e-28 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 8e-24 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 1e-13 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 6e-06 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 840 bits (2171), Expect = 0.0
Identities = 391/584 (66%), Positives = 463/584 (79%), Gaps = 11/584 (1%)
Query: 7 LSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLG--VPQQVIAINGKFPGPTINVTT 64
L LLA +AL + A D + Y+D+EVSY++A+PLG Q+ I ING+FPGP +NVTT
Sbjct: 7 LLLLAAALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTT 66
Query: 65 NNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSF 124
N N+VVNVRN LDE LL+ W G+QQR+S+WQDG+ GTNC IP WNWTYQFQVKDQVGSF
Sbjct: 67 NWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSF 126
Query: 125 FYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPD-GDITILIGDWYTRNHTALRKTLDAG 183
FY PS RA+GG+G INNR +IPIPF PD GDIT+ I DWY R+H ALR+ LDAG
Sbjct: 127 FYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAG 186
Query: 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN 243
LG PDGVLIN GPYQYN +LVP GI YE I V PGKTYR RVHNVG++TSLNFRIQ
Sbjct: 187 DLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQG 246
Query: 244 HNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRV 303
HNLLL E EGSYT QQNYT+LDIHVGQSYSFL+TMDQNASTDYY+VASARFV+ + ++
Sbjct: 247 HNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKL 306
Query: 304 TGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGS 363
TGVAILHY+NS+G A GPLP+ P+D++D FS+NQARSIRWNV+ASGARPNPQGSF YG
Sbjct: 307 TGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGD 366
Query: 364 INVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423
I VT+VY+L++ PE+IDGK RATL+ IS++ PSTP+ LA F V G +KLDFP P+
Sbjct: 367 ITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLDFPNHPMNR 426
Query: 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWD 483
P+++TS+INGTY+GFME+I QNN T + +YH+ GYAFFVVGMDYG WTDNSRGTYNKWD
Sbjct: 427 LPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWD 486
Query: 484 GIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE-ATNKTEFP 542
G+AR+T QV+PGAWTAILV LDN GIWNLR ENLD+WYLGQE Y+ VVNPE +NKT P
Sbjct: 487 GVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLP 546
Query: 543 IPDNALFCGALSHLQKPED----ISAATAIT---GDRLKMFFTL 579
IPDNA+FCGALS LQK + S A+ IT G +K+ F L
Sbjct: 547 IPDNAIFCGALSSLQKEQSHRFQYSEASPITPLWGKTVKLLFFL 590
|
Length = 596 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 648 bits (1672), Expect = 0.0
Identities = 278/561 (49%), Positives = 376/561 (67%), Gaps = 22/561 (3%)
Query: 5 RGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTT 64
R L++L A +A + A D + +F + V+Y TASPLGVPQQVI ING+FPGP IN T+
Sbjct: 5 RLLAVLLCLAAAVALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTS 64
Query: 65 NNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSF 124
NNN+V+NV N LDE L+ WSGIQQR++SWQDG+ GTNCPIPP N+TY FQ KDQ+GS+
Sbjct: 65 NNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSY 124
Query: 125 FYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK 184
FY+PS RA+GGFGG +N+R +IP+P+ P+ D T+LIGDWYT++HTAL+K LD+G+
Sbjct: 125 FYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSGR 184
Query: 185 GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244
LG PDGVLINGK DG D + PGKTYR R+ NVG+ +SLNFRIQ H
Sbjct: 185 TLGRPDGVLINGKSGK-------GDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGH 237
Query: 245 NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVT 304
+ L E EGS+ +Q +Y SLD+HVGQ +S LVT +Q A DYY+VAS RF+ + T
Sbjct: 238 KMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQ-APKDYYMVASTRFLKKVL----T 292
Query: 305 GVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSI 364
I+ Y KG A LPE P +S+NQ RS RWN++AS ARPNPQGS+ YG I
Sbjct: 293 TTGIIRYEGGKGPASPELPEAPVGW---AWSLNQFRSFRWNLTASAARPNPQGSYHYGKI 349
Query: 365 NVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKV-KGAYKL----DFPTK 419
N+T L N +DGK R L+G+S V+P TP++LA++F V +K D P
Sbjct: 350 NITRTIKLVNS-ASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPP- 407
Query: 420 PVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTY 479
+++ +V+N T+R F+E+I +N++ M ++H+ GY+FF V ++ G WT R Y
Sbjct: 408 AKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNY 467
Query: 480 NKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKT 539
N D ++R T QVYP +W AIL++ DN G+WN+R+EN + YLGQ+ Y V++PE + +
Sbjct: 468 NLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRD 527
Query: 540 EFPIPDNALFCGALSHLQKPE 560
E+ +P+NAL CG + L KP
Sbjct: 528 EYNMPENALLCGKVKGLPKPP 548
|
Length = 552 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 580 bits (1496), Expect = 0.0
Identities = 278/548 (50%), Positives = 372/548 (67%), Gaps = 25/548 (4%)
Query: 7 LSLLAIHIALLA--SLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTT 64
L LL +A+L+ SL + D + Y+ + V+Y T SPLGVPQQVI ING+FPGP ++V T
Sbjct: 7 LHLLLGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVT 66
Query: 65 NNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSF 124
N+N+++N+ NKLD+ L+ W+GI+QR++SWQDG+LGTNCPIPP N+TY+FQ KDQ+G+F
Sbjct: 67 NDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTF 126
Query: 125 FYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK 184
YFPS F +A+GGFG + R IPIPF PDGD T+L+GDWY +H L++ LD+GK
Sbjct: 127 TYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGK 186
Query: 185 GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244
L PDGVLING Q +T D GKTY R+ NVG+STSLNFRIQ H
Sbjct: 187 VLPFPDGVLING----QTQSTFSGD----------QGKTYMFRISNVGLSTSLNFRIQGH 232
Query: 245 NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVT 304
+ L E EGS+T+Q Y SLD+HVGQS + LVT++Q + DYYIVAS RF + +T
Sbjct: 233 TMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQ-SPKDYYIVASTRFTR----QILT 287
Query: 305 GVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSI 364
A+LHY+NS+ A GPLP P+ E +SM QAR+ RWN++AS ARPNPQGSF YG I
Sbjct: 288 ATAVLHYSNSRTPASGPLPALPSGEL--HWSMRQARTYRWNLTASAARPNPQGSFHYGKI 345
Query: 365 NVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD-FPTKPVTG 423
T+ VL N P +I+GK+R ++G+S+VN TP++LAD+F + G + ++ + P G
Sbjct: 346 TPTKTIVLANSAP-LINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGG 404
Query: 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWD 483
P + TSV+ + F+EV+ QNN+ M ++H+ GY F+VVG G+WT R YN D
Sbjct: 405 PAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVD 464
Query: 484 GIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPI 543
+ R T QVYP +WT ILVSLDN G+WN+R+ + YLGQ+ Y+RV N + E+ I
Sbjct: 465 ALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDI 524
Query: 544 PDNALFCG 551
PDNAL CG
Sbjct: 525 PDNALLCG 532
|
Length = 539 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 558 bits (1440), Expect = 0.0
Identities = 245/535 (45%), Positives = 335/535 (62%), Gaps = 28/535 (5%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ 89
+ + VSY LG +QVI IN FPGP +N T N+ + VN+ N L E L+ W+G+Q
Sbjct: 29 YQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQL 88
Query: 90 RRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149
R++SWQDG+ GTNCPI P NWTY+FQVKDQ+GS+FYFPSL Q+A+GG+G I N +
Sbjct: 89 RKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPEL 148
Query: 150 IPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPD 209
+P+PF PD + ILIGDW+ +HT +R +LD G L PDG+L NG+GP T
Sbjct: 149 VPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGHSLPNPDGILFNGRGP---EETF--- 202
Query: 210 GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVG 269
PGKTYR+R+ NVG+ T LNFRIQ+H++LL ETEG+Y ++ Y+SLDIHVG
Sbjct: 203 ------FAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVG 256
Query: 270 QSYSFLVTMDQNAS---TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
QSYS LVT + YYIVA+ARF + + GVA++ Y NS GPLP P
Sbjct: 257 QSYSVLVTAKTDPVGIYRSYYIVATARFTD----AYLGGVALIRYPNSPLDPVGPLPLAP 312
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
D S+ QA SIR +++ AR NPQGS+ YG INVT +L N + GK R
Sbjct: 313 ALH-DYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHND-VMLSSGKLRY 370
Query: 387 TLSGISFVNPSTPIRLADWFKVKGAYKLD-FPTKPVTGPPRMETSVINGTYRGFMEVILQ 445
T++G+SFV P TP++L D F++ FP P P + TSV++ Y+ F ++ Q
Sbjct: 371 TINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVFQ 430
Query: 446 NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD 505
N + +YH+ GY FFVVG +G W+++ + YN D ++R+T QVYP +WTAIL+++D
Sbjct: 431 NPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMD 490
Query: 506 NVGIWNLRTENLDSWYLGQETYVRVVNPEATN------KTEFPIPDNALFCGALS 554
N G+WN+R++ + WYLGQE Y+RV + + E PIP N + CG +S
Sbjct: 491 NQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGKVS 545
|
Length = 545 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 556 bits (1433), Expect = 0.0
Identities = 265/544 (48%), Positives = 359/544 (65%), Gaps = 32/544 (5%)
Query: 24 ADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIH 83
AD +++++ V+Y S L +P++ I ING+FPGP I TN+N+V+NV N LDE L+
Sbjct: 13 ADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLS 72
Query: 84 WSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFI 143
W+G+ R++S+QDG+ GT CPIPP N+TY FQVKDQVGS+FYFPSL Q+A+GG+G
Sbjct: 73 WNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLR 132
Query: 144 INNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGL-GMPDGVLINGKG-PYQ 201
I + IP+PF P GD T LIGDWY RNHT L+K LD G+ L MPDGV+ING+G Y
Sbjct: 133 IYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGVSYV 192
Query: 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNY 261
Y+ T V GKTYR R+ NVG+ TSLNF I H L L E EG++TVQ Y
Sbjct: 193 YSIT------------VDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMY 240
Query: 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGK---- 317
TSLDIHVGQ+YS LVTMDQ +Y IV S RF+ +V + LHY+NSKG
Sbjct: 241 TSLDIHVGQTYSVLVTMDQ-PPQNYSIVVSTRFIA----AKVLVSSTLHYSNSKGHKIIH 295
Query: 318 ARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP 377
AR P P+ D +S+ QA+SIR N++ASG R NPQGS+ YG + ++ +L +
Sbjct: 296 ARQPDPD------DLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAA 349
Query: 378 EMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKL-DFPTKPVTGPP-RMETSVINGT 435
++ K+R ++G+SFV TP++LAD FK+KG +K+ P KP G R++TSV+
Sbjct: 350 -LVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAH 408
Query: 436 YRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPG 495
+ F+E+I QN + + +YH+ GY F+VVG++ G W+ SR YN D I+R+TTQVYP
Sbjct: 409 HNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPE 468
Query: 496 AWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555
+WTA+ V+LDNVG+WNLR++ YLGQ+ Y+RV +P + K E+P+P NAL CG S+
Sbjct: 469 SWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASN 528
Query: 556 LQKP 559
Sbjct: 529 KNMS 532
|
Length = 536 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 551 bits (1420), Expect = 0.0
Identities = 265/537 (49%), Positives = 356/537 (66%), Gaps = 23/537 (4%)
Query: 16 LLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNK 75
L S +A D + +F++ V+Y SPLGV QQ I INGKFPGP I TN+N+++NV N
Sbjct: 17 FLISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNH 76
Query: 76 LDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRA 135
LDE LI WSGI+ R+S+QDG+ GT CPIPP N+TY QVKDQ+GSF+YFPSL F +A
Sbjct: 77 LDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKA 136
Query: 136 SGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLIN 195
+GGFG I++R +IP+PF P D T+LIGDWY NH LR LD G L +PDG+LIN
Sbjct: 137 AGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGILIN 196
Query: 196 GKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255
G+G T+ + PGKTYR+R+ NVG+ SLNFRIQNH + L E EG++
Sbjct: 197 GRG-------------SGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTH 243
Query: 256 TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315
T+Q ++SLD+HVGQSYS L+T DQ A DYYIV S+RF + K + +LHY+NS
Sbjct: 244 TIQTPFSSLDVHVGQSYSVLITADQPAK-DYYIVVSSRFTS----KILITTGVLHYSNSA 298
Query: 316 GKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNK 375
G GP+P+GP ++S +QAR+I+ N++ASG RPNPQGS+ YG IN+T L N
Sbjct: 299 GPVSGPIPDGP---IQLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANS 355
Query: 376 PPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKL-DFPTKPVTGPPRMETSVING 434
I+GK+R ++ SF TP++LAD+FK+ G Y P +P G TSV+
Sbjct: 356 AGN-IEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQT 414
Query: 435 TYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP 494
Y+ F+E++ +N + + +H+ GY+F+VVGM+ G+W+ SR YN D ++R T QVYP
Sbjct: 415 DYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYP 474
Query: 495 GAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCG 551
+WTAI VSLDNVG+WNLR+E + YLGQ+ Y+RV + + E+ IP NAL CG
Sbjct: 475 RSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCG 531
|
Length = 543 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 251 bits (642), Expect = 4e-76
Identities = 168/566 (29%), Positives = 265/566 (46%), Gaps = 72/566 (12%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQ 88
+ +EV Y SP + VI ING+FPGPTI + +VV + NKL E ++IHW GI+
Sbjct: 4 YKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIR 63
Query: 89 QRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147
Q + W DG G T C I P + Y F V D+ G++FY QR++G +G I++
Sbjct: 64 QIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVP 122
Query: 148 AIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPYQYNTT 205
PF DG+ +L+ DW+ ++ L + + +G P +LING+G Q+N +
Sbjct: 123 DGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRG--QFNCS 179
Query: 206 L-------------VPDGIDY--ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250
L + + + V PGKTYR+R+ + +LNF I+ H L + E
Sbjct: 180 LAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVE 239
Query: 251 TEGSYTVQQNYTS-LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAIL 309
+G+Y V+ +DI+ G++YS L+T DQ+ S +Y+I R + G+ +L
Sbjct: 240 ADGNY-VEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNT---PPGLTVL 295
Query: 310 HYTNSKGKARGPLPE--GPN-DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINV 366
+Y + P P P D+FD+ S + +I +A G+ P+ S R
Sbjct: 296 NYYPNSPSRLPPTPPPVTPAWDDFDR--SKAFSLAI---KAAMGSPKPPETSDR------ 344
Query: 367 TEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP------ 420
VL N + I+G + ++ +S P TP + + + A+ P +
Sbjct: 345 --RIVLLNTQNK-INGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYD 401
Query: 421 -VTGPPRMETSVINGTYR----GFMEVILQN------NDTKMHAYHMSGYAFFVVGMDYG 469
PP T+ NG YR ++VILQN N+++ H +H+ G+ F+V+G YG
Sbjct: 402 IFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLG--YG 459
Query: 470 EW---TDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQET 526
E +YN + R T ++P WTA+ DN G+W ++G
Sbjct: 460 EGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMG--- 516
Query: 527 YVRVVNPEATNKTEFPIPDNALFCGA 552
+ VV E K +P AL CG
Sbjct: 517 -MGVVFAEGVEKVG-KLPKEALGCGL 540
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 2e-65
Identities = 148/509 (29%), Positives = 238/509 (46%), Gaps = 41/509 (8%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQ 88
++ F+V + L + ++ +NGKFPGPT+ + V+VNV N + ++ IHW G++
Sbjct: 5 HYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVR 64
Query: 89 QRRSSWQDG-LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147
Q R+ W DG T CPI P ++ Y F + Q G+ ++ + + RA+ +G +I +
Sbjct: 65 QLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRAT-VYGAIVILPK 123
Query: 148 AIIPIPFDTPDGDITILIGDWYTRN-HTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
+P PF PD ++ I++G+W+ + + + G + D ING YN +
Sbjct: 124 PGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCS- 182
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDI 266
D + V PGKTY +R+ N ++ L F I NH L + E + +YT ++ I
Sbjct: 183 SKDTF---KLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVI 239
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
GQ+ + L+T DQ+ Y++ A + T AIL Y + A+ LP P
Sbjct: 240 GPGQTTNVLLTADQSPGR-YFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLP 298
Query: 327 --ND-EFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP---EMI 380
ND FS N+ RS+ + P + +I + L P +
Sbjct: 299 AYNDTAAATNFS-NKLRSLN-SAQYPANVPVTIDRRLFFTIGLG----LDPCPNNTCQGP 352
Query: 381 DGKR-RATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP-----VTGPPR-METSVIN 433
+G R A+++ ISFV P+T + A +F + G + DFP P TG N
Sbjct: 353 NGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTN 412
Query: 434 GT------YRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEW---TDNSRGTYNK 481
GT + +E++LQ+ ++ H H+ GY FFVVG +G + D ++ +N
Sbjct: 413 GTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAK--FNL 470
Query: 482 WDGIARTTTQVYPGAWTAILVSLDNVGIW 510
D R T V G W AI DN G+W
Sbjct: 471 VDPPERNTVGVPTGGWAAIRFVADNPGVW 499
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 214 bits (545), Expect = 7e-62
Identities = 166/569 (29%), Positives = 273/569 (47%), Gaps = 63/569 (11%)
Query: 22 SAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESL 80
+A+ + +EV Y P V+ +NG+FPGPTI+ + +VV++ NKL E L
Sbjct: 18 TASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGL 77
Query: 81 LIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF 139
+IHW GI+Q+ S W DG G T C I P +TY+F V ++ G+ FY QR++G +
Sbjct: 78 VIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLY 136
Query: 140 GGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGK 197
G I++ A P DG+ +L+ DW+ + + L + + +G +LING+
Sbjct: 137 GSLIVD-VAKGPKERLRYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGR 195
Query: 198 GPYQYNTTLVP----------------DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI 241
G Q+N +L D +T+ V P KTYRIR+ + SLN +
Sbjct: 196 G--QFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAV 253
Query: 242 QNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK 301
Q H L++ E +G+Y +DI+ G+SYS L+T DQ+ S +YYI R + +
Sbjct: 254 QGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQ 313
Query: 302 RVTGVAILHYTNSKGKARGPLPEGPN-DEFDKTFSMNQARSIRWNVSASGARPNPQGSFR 360
+T + + SK + P P P D+F+++ + ++ + ++ P+P +R
Sbjct: 314 ALTILNYVTAPASKLPSSPP-PVTPRWDDFERSKNFSK------KIFSAMGSPSPPKKYR 366
Query: 361 YGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420
+ +L N +IDG + ++ +S V P+TP + + +K + P +
Sbjct: 367 -------KRLILLNT-QNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRS 418
Query: 421 -------VTGPPRMETSVINGTYRG----FMEVILQNND------TKMHAYHMSGYAFFV 463
+ PP T+ NG Y ++VI+QN + +++H +H+ G+ F+V
Sbjct: 419 YRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWV 478
Query: 464 VGMDYGEWTDN-SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYL 522
+G G++ TYN + R T +YP WTAI DN G+W ++
Sbjct: 479 LGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHM 538
Query: 523 GQETYVRVVNPEATNKTEFPIPDNALFCG 551
G + VV E N+ IPD AL CG
Sbjct: 539 G----MGVVFAEGLNRIG-KIPDEALGCG 562
|
Length = 574 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 208 bits (530), Expect = 9e-60
Identities = 172/572 (30%), Positives = 271/572 (47%), Gaps = 78/572 (13%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQ 88
+ +EV Y SP + VI ING+ PGPTI + V+V ++N L E++ IHW GI+
Sbjct: 27 YKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIR 86
Query: 89 QRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147
Q + W DG G T CPI P +TY+F V D+ G++ Y QR +G +G ++
Sbjct: 87 QIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLP 145
Query: 148 AIIPIPFDTPDGDITILIGDWY--TRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTT 205
PF + D D +I++ DWY + AL + +G P +LI GKG +YN +
Sbjct: 146 RGKSEPF-SYDYDRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKG--RYNCS 202
Query: 206 LV--------------PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET 251
LV P+ Y + V PGKTYR+R+ ++ ++L+F+I+ HN+ + E
Sbjct: 203 LVSSPYLKAGVCNATNPECSPY-VLTVVPGKTYRLRISSLTALSALSFQIEGHNMTVVEA 261
Query: 252 EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY 311
+G Y +L I+ G++YS LV DQ+ S +Y++ S N + G+AI +Y
Sbjct: 262 DGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTT---PPGLAIFNY 318
Query: 312 TNSKGKARGPL--PEGP--NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 367
+ + P P GP ND + +NQ+ +I+ AR G +
Sbjct: 319 YPNHPRRSPPTVPPSGPLWNDVEPR---LNQSLAIK-------AR---HGYIHPPPLTSD 365
Query: 368 EVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG---- 423
V VL N E ++G RR +++ +SF P TP +A + GA+ T P G
Sbjct: 366 RVIVLLNTQNE-VNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFD---QTPPPEGYDFA 421
Query: 424 -------PPRMETSVINGTYR----GFMEVILQN------NDTKMHAYHMSGYAFFVVGM 466
P + + YR +++ILQN N+++ H +H+ G+ F+V+G
Sbjct: 422 NYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLG- 480
Query: 467 DYGEWT-DNSRG--TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLG 523
YGE + S YN D I + T V+P WTA+ DN G+W +++G
Sbjct: 481 -YGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMG 539
Query: 524 QETYVRVVNPEATNKTEFPIPDNALFCGALSH 555
+ VV E + +P + + CG
Sbjct: 540 ----MGVVFEEGIERVG-KLPSSIMGCGESKG 566
|
Length = 566 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-48
Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 33 EVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS 92
V+Y T +PLG +QVI +NG+FPGPTI V + VVVNV N LDE IHW G++Q +
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTTIHWHGLRQPGT 60
Query: 93 SWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR-ASGGFGGFIINNRA 148
W DG+ G T CPIPP ++TY+F VK Q G+++Y + + A+G +G II + A
Sbjct: 61 PWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 3e-44
Identities = 60/161 (37%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 159 GDITILIGDWYTRNHTALRKTLDA-----GKGLGMPDGVLINGKGPYQYNTTLVPDGIDY 213
D I + DWY ++ L K L A +PD VLINGK G
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKD-----------GASL 49
Query: 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYS 273
T+ V PGKTYR+R+ NV + SLNF I+ H + + E +G Y SLDI GQ YS
Sbjct: 50 ATLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYS 109
Query: 274 FLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314
LVT +Q+ +Y+IVAS + T AIL Y+ +
Sbjct: 110 VLVTANQDPG-NYWIVASPNIPA---FDNGTAAAILRYSGA 146
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 5e-31
Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 398 TPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMS 457
TP +L ++ G + P GPP T VI +E++LQNN H +H+
Sbjct: 2 TPPKLPTLLQITGGNDRANWS-PDNGPPLGTTEVITLPNGDRVEIVLQNNTMGPHPFHLH 60
Query: 458 GYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENL 517
G++F V+G G WT + TYN D + R T QV PG W AI DN G W L
Sbjct: 61 GHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCHIL 118
Query: 518 DSWYLGQETYVRVVNPEA 535
W+L Q + V
Sbjct: 119 --WHLDQGMMGQFVVDPG 134
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 7e-28
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 22/297 (7%)
Query: 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDG-LLGT 101
+ + +NG PGP I + + V N + D ++ +HW G+ QR + + DG L +
Sbjct: 25 SSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLAS 84
Query: 102 NCPIPPKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGD 160
PIPP + Y+ + + GS+FY + FQ A FG I+ P P+ D +
Sbjct: 85 QWPIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQ-AVTAFGPLIV--EDCEPPPYKY-DDE 140
Query: 161 ITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKG-PYQYNTTLVPDG-IDYETI 216
+L+ D+++ + + L + G + VL+NGK + + P G I
Sbjct: 141 RILLVSDFFSATDEEIEQGLLSTPFTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVI 200
Query: 217 EVHPGKTYRIRVHNVGISTSLNFRIQNHNLL-LAETEGSYTVQQNYTSLDIHVGQSYSFL 275
+V PGKTYR+R + ++ I++H L + E +GSYT L + GQ YS L
Sbjct: 201 DVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVL 260
Query: 276 V---TMDQNASTD---YYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
T D+ D Y+I +F + K G A+L Y + K +PE P
Sbjct: 261 FKAKTEDELCGGDKRQYFI----QFETRDRPKVYRGYAVLRYRSDKASKLPSVPETP 313
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 8e-24
Identities = 64/292 (21%), Positives = 99/292 (33%), Gaps = 28/292 (9%)
Query: 6 GLSLLAIHIALLASLCSAADL-FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTT 64
L + I L + A G V NG PGPTI V
Sbjct: 13 VAGALTLPIPPLLLTRAGGMARTFLTAQRAQLAFAPGTGAT--VWGYNGALPGPTIRVKK 70
Query: 65 NNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGS 123
+ V +++ N+L +HW G+ DG+ T P P TY F D G+
Sbjct: 71 GDTVTLDLTNRLLVDTSVHWHGLPV--PGEMDGVPPLTQIPPGPGETPTYTFTQ-DVPGT 127
Query: 124 FFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILI-GDWYTRNHTALRKTLDA 182
++Y P H Q G G II + P+ D D +++ DW
Sbjct: 128 YWYHPHTHGQVYDGLAGALIIEDENSEPLGVD----DEPVILQDDWLD------------ 171
Query: 183 GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQ 242
G G + +T LV +G V PG R+R+ N G + + + +
Sbjct: 172 --EDGTDLYQEGPAMGGFPGDTLLV-NGAILPFKAV-PGGVVRLRLLNAGNARTYHLALG 227
Query: 243 NHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294
L + +G + L + G+ Y LV M+ + +
Sbjct: 228 GGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMNDGGAVTLTALGEDMP 279
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 1e-13
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ 89
FD + + G + I +NG PGP + + V + V N L E IHW GI
Sbjct: 48 FDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILL 107
Query: 90 RRSSWQDGLLGTNCP-IPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148
DG+ G + I P +TY+F V+ Q G+++Y FQ +G +G II+
Sbjct: 108 --PFQMDGVPGVSFAGIAPGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIIDPAE 164
Query: 149 IIPIPFDTPDGDITILIGDW 168
P+ D + +L+ DW
Sbjct: 165 PDPVRADR---EHVVLLSDW 181
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 6e-06
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 51 INGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWN 110
NG GP + + V V++ N+L E +HW G++ DG G I P
Sbjct: 70 YNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEV--PGEVDG--GPQGIIAPGGK 125
Query: 111 WTYQFQVKDQVGSFFYF-PSLH----FQRASGGFGGFII 144
T F V DQ + +F P H Q A G G ++
Sbjct: 126 RTVTFTV-DQPAATCWFHPHQHGKTGRQVAM-GLAGLVL 162
|
Length = 523 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 591 | |||
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.96 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.78 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.61 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.54 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.38 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.19 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 99.11 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.01 | |
| PLN02835 | 539 | oxidoreductase | 98.97 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 98.9 | |
| PLN02792 | 536 | oxidoreductase | 98.88 | |
| PLN02991 | 543 | oxidoreductase | 98.87 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.84 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 98.81 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.81 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.77 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.76 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.73 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.64 | |
| PLN02604 | 566 | oxidoreductase | 98.63 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.55 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.52 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.35 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.28 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.2 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.03 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.79 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 97.77 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.58 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 97.54 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.43 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.41 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.39 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.25 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.16 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 96.87 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.86 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 96.44 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.15 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.04 | |
| PRK02710 | 119 | plastocyanin; Provisional | 95.98 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 94.01 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.9 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 93.7 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 93.02 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 92.68 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.58 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.46 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 91.44 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 90.61 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 90.17 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 86.28 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 85.2 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 84.96 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 82.05 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 80.83 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 80.71 |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-119 Score=976.88 Aligned_cols=554 Identities=68% Similarity=1.195 Sum_probs=458.6
Q ss_pred HHHHHhhhcccCCceEEEEEEEEEEEecCCC--eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC
Q 007735 13 HIALLASLCSAADLFVYFDFEVSYITASPLG--VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR 90 (591)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~dG--~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~ 90 (591)
+++++-+.+.|++++++|+|+|++..++||| ..+++++|||++|||+|++++||+|+|+|+|+|+++++|||||++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~ 92 (596)
T PLN00044 13 ALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQR 92 (596)
T ss_pred HHhcCCCccccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCccCC
Confidence 3434445566788899999999999999999 55799999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCC-CcceEEecccc
Q 007735 91 RSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPD-GDITILIGDWY 169 (591)
Q Consensus 91 ~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d-~e~~l~l~d~~ 169 (591)
+++|+||+++|||||+||++|+|+|++++|+||||||||++.|+++||+|+|||++++..+.||..++ +|++|+|+|||
T Consensus 93 ~t~w~DGv~~TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~ 172 (596)
T PLN00044 93 KSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWY 172 (596)
T ss_pred CCccccCCCCCcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccc
Confidence 99999999889999999999999999988999999999999999999999999999877666775444 79999999999
Q ss_pred cCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE
Q 007735 170 TRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (591)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 249 (591)
+++...+...+..|...+.++.++|||++.+.++|+........+.++|++||+|||||||++..+.+.|+|+||+|+||
T Consensus 173 ~~~~~~~~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVI 252 (596)
T PLN00044 173 ARDHRALRRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLV 252 (596)
T ss_pred cCCHHHHHHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEE
Confidence 99877766666666555678999999998876666643334456789999999999999999999999999999999999
Q ss_pred eecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 007735 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDE 329 (591)
Q Consensus 250 a~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~ 329 (591)
|+||.+++|+.+++|.|++||||||+|+++++++++|||++...+.....+.+..+.|||+|.++....+.++|..|...
T Consensus 253 a~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~~~P~~p~~~ 332 (596)
T PLN00044 253 EAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQ 332 (596)
T ss_pred EeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCCCCCCCCccc
Confidence 99999999999999999999999999999987654899998764322111345678899999886532222334333211
Q ss_pred cCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhcccccc
Q 007735 330 FDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVK 409 (591)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~ 409 (591)
++..++.++.+.++++.......|.|+++.++...++.+.+.+........+|+.+|+|||++|..|++|+|++.+++++
T Consensus 333 ~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~~~~ 412 (596)
T PLN00044 333 YDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVP 412 (596)
T ss_pred CCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCCcchhhhhccCC
Confidence 13333444445555555544455666665555444554444333211112235789999999999999999988888888
Q ss_pred ccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccce
Q 007735 410 GAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (591)
Q Consensus 410 g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDT 489 (591)
++|..++++.|........+.++.++++++|||+|+|.....||||||||+||||++|.|.|++.++..||++||++|||
T Consensus 413 gv~~~~fp~~pp~~~~~~~t~v~~~~~n~~VeiV~qn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nPp~RdT 492 (596)
T PLN00044 413 GVFKLDFPNHPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARST 492 (596)
T ss_pred CcccCCCCCCCCccccccCceEEEcCCCCEEEEEEeCCCCCCCCeeEcCccEEEEeecCCCCCCCcccccccCCCCccce
Confidence 99987777766554455678999999999999999998778999999999999999999999987777899999999999
Q ss_pred EEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCC-CCCCCCCCCCcccccCcCCCCCCCcccccc
Q 007735 490 TQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEAT-NKTEFPIPDNALFCGALSHLQKPEDISAAT 566 (591)
Q Consensus 490 v~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~-~~~~~~~p~~~~~c~~~~~~~~~~~~~~~~ 566 (591)
+.|+++||++|||++||||+|+|||||+.||+.||++++.|.++.+. .+++.++|++.+.||..+++++.+.+.+..
T Consensus 493 v~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~~~Cg~~~~~~~~~~~~~~~ 570 (596)
T PLN00044 493 IQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCGALSSLQKEQSHRFQY 570 (596)
T ss_pred EEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCcccCcccccccCCCCCCCcccc
Confidence 99999999999999999999999999999999999999999988764 556788999999999999988877766444
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-115 Score=941.78 Aligned_cols=523 Identities=51% Similarity=0.937 Sum_probs=443.7
Q ss_pred HHHHHHHhhhcccCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC
Q 007735 11 AIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR 90 (591)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~ 90 (591)
++.+++|+++..|++++++|+|+|++..++|||+++++++|||++|||+|++++||+|+|+|+|+|+++++|||||++|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~ 91 (543)
T PLN02991 12 ILGLLFLISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNW 91 (543)
T ss_pred HHHHHHHHhhhhccCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCcccC
Confidence 45566677777778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEeccccc
Q 007735 91 RSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYT 170 (591)
Q Consensus 91 ~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~ 170 (591)
+++||||+++|||||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.|+..+|+|++++|+||++
T Consensus 92 ~~~~~DGv~~tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~ 171 (543)
T PLN02991 92 RNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYK 171 (543)
T ss_pred CCccccCCCCCCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecceec
Confidence 99999999999999999999999999977999999999999999999999999999876667777778999999999999
Q ss_pred CchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe
Q 007735 171 RNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (591)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 250 (591)
++...+...+..+...+.+|.+||||++. .+.++|++||+|||||||+|..+.+.|+|+||+|+|||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~d~~liNG~~~-------------~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa 238 (543)
T PLN02991 172 TNHKDLRAQLDNGGKLPLPDGILINGRGS-------------GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVE 238 (543)
T ss_pred CCHHHHHHHhhcCCCCCCCCEEEEccCCC-------------CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEE
Confidence 98766655555565667899999999975 26899999999999999999999999999999999999
Q ss_pred ecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCc
Q 007735 251 TEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEF 330 (591)
Q Consensus 251 ~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~ 330 (591)
+||.+++|..++++.|++||||||+|+++++++ +|||++...+.. ......|||+|.++..+.+.+.|..|.
T Consensus 239 ~DG~~~~p~~~~~l~i~~GQRydvlv~a~~~~~-~y~i~~~~~~~~----~~~~~~AIl~Y~g~~~~~~~~~p~~p~--- 310 (543)
T PLN02991 239 VEGTHTIQTPFSSLDVHVGQSYSVLITADQPAK-DYYIVVSSRFTS----KILITTGVLHYSNSAGPVSGPIPDGPI--- 310 (543)
T ss_pred eCCccccceeeeEEEEcCCcEEEEEEECCCCCC-cEEEEEeeccCC----CCcceEEEEEeCCCCCCCCCCCCCCCc---
Confidence 999999999999999999999999999999888 999999875442 235678999999875322223443332
Q ss_pred CcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccc
Q 007735 331 DKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKG 410 (591)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g 410 (591)
+..++.++....+.++.+....+.|..++.+...++++.+.+..... ..+|+.+|+|||++|..|++|+|++.+++++|
T Consensus 311 ~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~~g 389 (543)
T PLN02991 311 QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAG-NIEGKQRYAVNSASFYPADTPLKLADYFKIAG 389 (543)
T ss_pred cccccccchhhhhhcccCCCCCCCCCccccccccccceeEEEeeccc-ccCceEEEEECCCccCCCCCChhhhhhhcccC
Confidence 22333333333344555444455565555544456666665554222 23467799999999999999999888877788
Q ss_pred cccCC-CCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccce
Q 007735 411 AYKLD-FPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (591)
Q Consensus 411 ~~~~~-~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDT 489 (591)
+|+.+ +++.|..+.....++++.++++++|||+|+|.+...||||||||+||||++|.|.|++.+...||+.||++|||
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP~rRDT 469 (543)
T PLN02991 390 VYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCT 469 (543)
T ss_pred ccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcceEEEEeCCCCCCcccccccCCCCCCcccE
Confidence 88765 55555444444567888999999999999999888999999999999999999999877667899999999999
Q ss_pred EEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCC
Q 007735 490 TQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555 (591)
Q Consensus 490 v~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~ 555 (591)
+.||++||++|||++||||+|+|||||..|+.+||+++++|.++++..+++.++|++.+.||..++
T Consensus 470 v~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg~~~~ 535 (543)
T PLN02991 470 VQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATG 535 (543)
T ss_pred EEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccccCCC
Confidence 999999999999999999999999999999999999999999888877777889999999987666
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-114 Score=938.11 Aligned_cols=522 Identities=52% Similarity=0.962 Sum_probs=430.4
Q ss_pred CCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNC 103 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~ 103 (591)
++++++|+|+|++.+++|||+++++++||||+|||+||+++||+|+|+|+|+|+++++|||||++|++++||||+++|||
T Consensus 24 ~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~~~ttiHWHGi~q~~~~~~DGv~~TQc 103 (552)
T PLN02354 24 EDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPGTNC 103 (552)
T ss_pred cccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCCCCcccccccccCCCCcccCCCcCCcC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcC
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 183 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 183 (591)
||+||++|+|+|++.+|+||||||||.+.|+++||+|+|||++++..+.||+.+|+|++|+|+|||+++...+...+..+
T Consensus 104 pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g 183 (552)
T PLN02354 104 PIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSG 183 (552)
T ss_pred CCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCceEEEEeeeeccCCHHHHHHHHhcC
Confidence 99999999999998779999999999999999999999999998766678877789999999999999877776666666
Q ss_pred CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 184 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
...+.++++||||+....| ....+.++|++||+|||||||+|....+.|+|+||+|+|||+||++++|..+++
T Consensus 184 ~~~~~~d~~liNG~~~~~~-------~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v~p~~~~~ 256 (552)
T PLN02354 184 RTLGRPDGVLINGKSGKGD-------GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDS 256 (552)
T ss_pred CCCCCCCeEEEeCCcCCCC-------CCCceEEEECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCcccCCcceeE
Confidence 6566789999999975332 123588999999999999999999999999999999999999999999999999
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccc
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIR 343 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 343 (591)
|.|++||||||+|++++++| +|||++...+.. .+....|||+|.++..+.+.+.|..+. +..+..++...++
T Consensus 257 l~i~~GqRydVlv~a~~~~g-~Y~i~a~~~~~~----~~~~~~ail~Y~g~~~~~~~~~p~~~~---~~~~~~~~~~~~~ 328 (552)
T PLN02354 257 LDVHVGQCFSVLVTANQAPK-DYYMVASTRFLK----KVLTTTGIIRYEGGKGPASPELPEAPV---GWAWSLNQFRSFR 328 (552)
T ss_pred EEEccCceEEEEEECCCCCC-cEEEEEeccccC----CCccEEEEEEECCCCCCCCCCCCCCCc---ccccchhhhhhhh
Confidence 99999999999999999888 999999854332 236678999998865332222332221 1112233333343
Q ss_pred cccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccc-cccccCC-CCCCCC
Q 007735 344 WNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKV-KGAYKLD-FPTKPV 421 (591)
Q Consensus 344 ~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~-~g~~~~~-~~~~p~ 421 (591)
.++.+....|.+.....+...++++++.+..... ..+|..+|+|||++|..|++|+|++.++++ .|.++.+ ++..|.
T Consensus 329 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iNn~s~~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp 407 (552)
T PLN02354 329 WNLTASAARPNPQGSYHYGKINITRTIKLVNSAS-KVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPP 407 (552)
T ss_pred hcccccccCCCCCCccccccccccceEEEecccc-cCCceEEEEECCccCCCCCCChHHhhhhcccCCccccCccccCCc
Confidence 4444433344444333333345666666654322 234677899999999999999998776544 3666544 233221
Q ss_pred --CCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEE
Q 007735 422 --TGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTA 499 (591)
Q Consensus 422 --~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~ 499 (591)
......+++++.+++|++|||+|+|.+...||||||||+||||++|.|.|++.....||+.||++|||+.||++||++
T Consensus 408 ~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~v 487 (552)
T PLN02354 408 AKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAA 487 (552)
T ss_pred cccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccEEEEeecCCCCCccccccCCcCCCCccceEEeCCCCeEE
Confidence 122345678899999999999999998889999999999999999999998766668999999999999999999999
Q ss_pred EEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCCCCCCCc
Q 007735 500 ILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPED 561 (591)
Q Consensus 500 irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~~~~~~ 561 (591)
|||++||||+|+|||||+.|+++||+++++|.++.+..+++.++|++.+.|++.+++++++.
T Consensus 488 IRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~ 549 (552)
T PLN02354 488 ILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKGLPKPPP 549 (552)
T ss_pred EEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCccccccccccCCCCCCC
Confidence 99999999999999999999999999999998776655555678999999998888766554
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-114 Score=936.00 Aligned_cols=523 Identities=52% Similarity=0.946 Sum_probs=434.7
Q ss_pred HHHHHHHhhhcccCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC
Q 007735 11 AIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR 90 (591)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~ 90 (591)
+++++-..+...+.+++++|+|+|++...++||+++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~ 92 (539)
T PLN02835 13 VLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQR 92 (539)
T ss_pred HHHHHHHHhhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcccC
Confidence 34444444555566689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEeccccc
Q 007735 91 RSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYT 170 (591)
Q Consensus 91 ~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~ 170 (591)
+++||||+++|||||+||++|+|+|++++|+||||||||++.|+++||+|+|||++++..+.||..+|+|++++++|||+
T Consensus 93 ~~~~~DGv~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~ 172 (539)
T PLN02835 93 KNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYK 172 (539)
T ss_pred CCCCCCCCccCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeecccc
Confidence 99999999999999999999999999877999999999999999999999999987665566777789999999999999
Q ss_pred CchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe
Q 007735 171 RNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (591)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 250 (591)
++...+...+..+...+.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||
T Consensus 173 ~~~~~~~~~~~~g~~~~~~d~~liNG~~~--------------~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~ 238 (539)
T PLN02835 173 TSHKTLQQRLDSGKVLPFPDGVLINGQTQ--------------STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVE 238 (539)
T ss_pred CCHHHHHHHhhcCCCCCCCceEEEccccC--------------ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEE
Confidence 98777666666666677899999999986 7899999999999999999999999999999999999
Q ss_pred ecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCc
Q 007735 251 TEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEF 330 (591)
Q Consensus 251 ~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~ 330 (591)
+||.+++|..++++.|++||||||+|+++++++ +|||++...+.. .+....|||+|.++..+.+.++|..|..
T Consensus 239 ~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g-~y~i~a~~~~~~----~~~~~~ail~Y~~~~~~~~~~~p~~p~~-- 311 (539)
T PLN02835 239 VEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPK-DYYIVASTRFTR----QILTATAVLHYSNSRTPASGPLPALPSG-- 311 (539)
T ss_pred ECCccCCCceeeEEEECcCceEEEEEEcCCCCC-cEEEEEEccccC----CCcceEEEEEECCCCCCCCCCCCCCCcc--
Confidence 999999999999999999999999999998888 999998653322 2356789999988654333344433321
Q ss_pred CcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccc
Q 007735 331 DKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKG 410 (591)
Q Consensus 331 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g 410 (591)
+..++...+....+.+.+....|.+.+++.+....+++++.+..... ..+|..+|+|||++|..|++|+|++.+++.++
T Consensus 312 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~ 390 (539)
T PLN02835 312 ELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAP-LINGKQRYAVNGVSYVNSDTPLKLADYFGIPG 390 (539)
T ss_pred ccccccchhhccccccCccccCCCCCccccccccCCCceEEEecccc-ccCCeEEEEECCcccCCCCCChhhhhhhcCCC
Confidence 11223333333344455444455554444333344566665543222 34567899999999999999998877766667
Q ss_pred cccCC-CCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccce
Q 007735 411 AYKLD-FPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (591)
Q Consensus 411 ~~~~~-~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDT 489 (591)
.|+.+ +...+.....+.+++++.+++|++|||+|+|.+...||||||||+||||++|.|.|+......||+.||++|||
T Consensus 391 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDT 470 (539)
T PLN02835 391 VFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHT 470 (539)
T ss_pred ccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccce
Confidence 77644 22233332345678999999999999999999888999999999999999999999866556789999999999
Q ss_pred EEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCC
Q 007735 490 TQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555 (591)
Q Consensus 490 v~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~ 555 (591)
+.|+++||++|||+|||||+|+|||||++|+..||+++++|.++.+......++|++++.||..++
T Consensus 471 v~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 471 AQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred EEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence 999999999999999999999999999999999999999999887766667889999999986655
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-113 Score=929.80 Aligned_cols=516 Identities=50% Similarity=0.902 Sum_probs=436.9
Q ss_pred ccCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGT 101 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~t 101 (591)
...+++++|+|+|++..++|||+++++++||||+|||+|++++||+|+|+|+|+|+++++|||||++|++++|+||+++|
T Consensus 11 ~~~~~~~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~t 90 (536)
T PLN02792 11 VKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGT 90 (536)
T ss_pred hhcCCeEEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCCC
Confidence 44556789999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhh
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~ 181 (591)
||||+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.||+.+|+|++++|+|||+++...+.+.++
T Consensus 91 qcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~~~~ 170 (536)
T PLN02792 91 TCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILD 170 (536)
T ss_pred cCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHHHhh
Confidence 99999999999999998899999999999999999999999999876656677777899999999999998776666566
Q ss_pred cCCCCC-CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeee
Q 007735 182 AGKGLG-MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (591)
Q Consensus 182 ~~~~~~-~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (591)
.+...+ .+|.+||||++..++ +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||++++|..
T Consensus 171 ~g~~~~~~~d~~liNG~~~~~~-----------~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~ 239 (536)
T PLN02792 171 GGRKLPLMPDGVMINGQGVSYV-----------YSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSM 239 (536)
T ss_pred ccCcCCCCCCEEEEeccCCCCc-----------ceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcc
Confidence 554434 789999999986432 78999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
+++|.|++||||||+|+++++++ +|||++...+.+. +..+.|||+|.++..... +.|..|.. .+..++.+...
T Consensus 240 ~~~l~i~~GqRydVlV~a~~~~g-~Y~i~a~~~~~~~----~~~~~ail~Y~g~~~~~~-~~p~~p~~-~~~~~~~~~~~ 312 (536)
T PLN02792 240 YTSLDIHVGQTYSVLVTMDQPPQ-NYSIVVSTRFIAA----KVLVSSTLHYSNSKGHKI-IHARQPDP-DDLEWSIKQAQ 312 (536)
T ss_pred eeEEEEccCceEEEEEEcCCCCc-eEEEEEEeccCCC----CCceEEEEEECCCCCCCC-CCCCCCCc-CCccccccchh
Confidence 99999999999999999998888 9999998765322 357789999988643211 11222211 13344444444
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCC-CCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD-FPTK 419 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~-~~~~ 419 (591)
.++.++.+..+.+.|++++++...++++++.+..... ..++..+|+|||++|..|++|+|++.++++.|+|+.+ +++.
T Consensus 313 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~iN~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~ 391 (536)
T PLN02792 313 SIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAA-LVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDK 391 (536)
T ss_pred hhhhccCCCCCCCCCCcccccceeccceeEEeccccc-ccCceeEEEECCcccCCCCCchhhhhhhccCCCcCcccCccC
Confidence 4455555444556677666665556667766554322 2345678999999999999999998887777888764 6665
Q ss_pred CCCC-CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEE
Q 007735 420 PVTG-PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498 (591)
Q Consensus 420 p~~~-~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~ 498 (591)
|..+ ....+++++.+++|++|||+|+|.+...||||||||+||||++|.|.|++.++..||+.||++||||.|+++||+
T Consensus 392 p~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~ 471 (536)
T PLN02792 392 PRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWT 471 (536)
T ss_pred CcccCCCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCceEEEeecCCCCCcccccccCcCCCCccceEEECCCCEE
Confidence 5432 234568899999999999999998888999999999999999999999887777899999999999999999999
Q ss_pred EEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCCC
Q 007735 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHL 556 (591)
Q Consensus 499 ~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~ 556 (591)
+|||++||||+|+||||++.|+.+||++++.|.++.+..+++.++|++.+.||..+++
T Consensus 472 aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~Cg~~~~~ 529 (536)
T PLN02792 472 AVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNK 529 (536)
T ss_pred EEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCccccccCC
Confidence 9999999999999999999999999999999998887776778899999999977663
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-113 Score=918.23 Aligned_cols=534 Identities=46% Similarity=0.762 Sum_probs=477.4
Q ss_pred HHHHHHhhhcccCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCC
Q 007735 12 IHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR 91 (591)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~ 91 (591)
+.++++..+..|+++++.|+|++++..++++|.+++++++||++|||+|+|++||+|+|+|.|+++++++|||||++|+.
T Consensus 13 ~~~~~~~~~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~k 92 (563)
T KOG1263|consen 13 CGSLLLVFFSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRK 92 (563)
T ss_pred HHHHHHHHHhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccC
Confidence 34444567778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccC
Q 007735 92 SSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTR 171 (591)
Q Consensus 92 ~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~ 171 (591)
++|+||+.+|||||+||++|+|+|++++|.||||||+|++.|+++|++|+|||+++...+.||+.+|+|++|+++|||++
T Consensus 93 n~w~DG~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~ 172 (563)
T KOG1263|consen 93 NPWQDGVYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKN 172 (563)
T ss_pred CccccCCccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccc
Confidence 99999944599999999999999999989999999999999999999999999999988889989999999999999996
Q ss_pred -chHHHHHHhhcCCCCCC-CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE
Q 007735 172 -NHTALRKTLDAGKGLGM-PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (591)
Q Consensus 172 -~~~~~~~~~~~~~~~~~-~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 249 (591)
++..+...++.+...+. +|.++|||+..+..+| .++++|++||+|||||+|+|....+.|+|+||+|+||
T Consensus 173 ~~~~~l~~~~~~~~~~p~~~D~~~iNg~~g~~~~~--------~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvV 244 (563)
T KOG1263|consen 173 LNHKNLKNFLDRTGALPNPSDGVLINGRSGFLYNC--------TPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVV 244 (563)
T ss_pred cCHHHHHHhhccCCCCCCCCCceEECCCCCcccCc--------eeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEE
Confidence 88888888777665554 8999999999766655 3899999999999999999999999999999999999
Q ss_pred eecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCC----CC
Q 007735 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLP----EG 325 (591)
Q Consensus 250 a~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p----~~ 325 (591)
|+||.+++|..+++|.|+|||||||+|++++.++ +|+|+++.++.....+.+....++++|.++..+.+.+.+ .+
T Consensus 245 e~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~-~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~ 323 (563)
T KOG1263|consen 245 EVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPG-DYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASEKLPIYPFLP 323 (563)
T ss_pred EecceEEeeeeeceEEEcCCcEEEEEEeCCCCCC-cEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcccCcccccCC
Confidence 9999999999999999999999999999999999 999999998765432236889999999986555444322 12
Q ss_pred CCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhcc
Q 007735 326 PNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADW 405 (591)
Q Consensus 326 p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~ 405 (591)
|. ++..+++++.+.++..++...++|+|++++++...++.+.+.+.+... ..+++.+++||+++|..|++|.+++.+
T Consensus 324 ~~--~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~siN~isf~~P~tp~~l~~~ 400 (563)
T KOG1263|consen 324 PG--NDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDN-KNNGKLRASINNISFVTPKTPSLLAAY 400 (563)
T ss_pred cc--cCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCC-CCCcEEEEEEcceEEECCCCchhhhhh
Confidence 22 266788899999999999999999999999999999999999887654 567899999999999999999999887
Q ss_pred ccc-cccccCCCCCCCC--CC--CCCcceEEEeccCCcEEEEEEecCCC---cceeeeecCceEEEEEEcCCCCCC--CC
Q 007735 406 FKV-KGAYKLDFPTKPV--TG--PPRMETSVINGTYRGFMEVILQNNDT---KMHAYHMSGYAFFVVGMDYGEWTD--NS 475 (591)
Q Consensus 406 ~~~-~g~~~~~~~~~p~--~~--~~~~~~~v~~~~~g~~ve~vl~N~~~---~~HPfHlHG~~F~Vv~~g~g~~~~--~~ 475 (591)
+.. ++.+..+++..|. .. +++.+++++.++++++|||+|+|.+. +.||||||||+|||||+|.|.|++ +.
T Consensus 401 ~~~~~~~~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~~~~~d~ 480 (563)
T KOG1263|consen 401 FKNIPGYFTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNWDPAKDP 480 (563)
T ss_pred hccCCccccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEecccccCcCcCh
Confidence 764 4455556777772 21 24789999999999999999999874 478889999999999999999998 55
Q ss_pred CCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCC
Q 007735 476 RGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555 (591)
Q Consensus 476 ~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~ 555 (591)
+..||++||+.||||.||||||++|||+|||||+|+||||+++|++.||+++++|.++++..+++.++|++.+.||..++
T Consensus 481 ~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~cg~~~~ 560 (563)
T KOG1263|consen 481 RKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKCGRASG 560 (563)
T ss_pred hhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccccccCC
Confidence 57899999999999999999999999999999999999999999999999999999999888888999999999999876
Q ss_pred CC
Q 007735 556 LQ 557 (591)
Q Consensus 556 ~~ 557 (591)
..
T Consensus 561 ~~ 562 (563)
T KOG1263|consen 561 IP 562 (563)
T ss_pred cC
Confidence 54
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-112 Score=917.74 Aligned_cols=510 Identities=48% Similarity=0.898 Sum_probs=417.8
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCc
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 104 (591)
+++++|+|+|++.+++|||+++++++|||++|||+||+++||+|+|+|+|+|+++|+|||||++|+.++||||+++||||
T Consensus 24 a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~gtQcp 103 (545)
T PLN02168 24 APIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNCP 103 (545)
T ss_pred ccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCCCcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcCC
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK 184 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 184 (591)
|+||++|+|+|++++|+||||||||.+.|+++||+|+|||++++..+.|++.+++|++|+|+||++.+...+...+..+.
T Consensus 104 I~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g~ 183 (545)
T PLN02168 104 ILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGH 183 (545)
T ss_pred CCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhhhcCC
Confidence 99999999999997789999999999999999999999999987766677777999999999999987655554455554
Q ss_pred CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEE
Q 007735 185 GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSL 264 (591)
Q Consensus 185 ~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v 264 (591)
..+.+|.+||||++.. .+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|
T Consensus 184 ~~~~~d~~liNG~~~~------------~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~l 251 (545)
T PLN02168 184 SLPNPDGILFNGRGPE------------ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 251 (545)
T ss_pred CCCCCCEEEEeccCCC------------cceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeEE
Confidence 4567899999999742 2789999999999999999999999999999999999999999999999999
Q ss_pred EEccccEEEEEEEeCCCC-C--cceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccc
Q 007735 265 DIHVGQSYSFLVTMDQNA-S--TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARS 341 (591)
Q Consensus 265 ~i~pGqR~dvlv~~~~~~-g--~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 341 (591)
.|++||||||+|++++++ | ++|||++...+... ...+.|||+|.++....+.|+|..|.. .+...+.+....
T Consensus 252 ~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~----~~~~~ail~Y~~~~~~~~~p~p~~p~~-~~~~~~~~~~~~ 326 (545)
T PLN02168 252 DIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDA----YLGGVALIRYPNSPLDPVGPLPLAPAL-HDYFSSVEQALS 326 (545)
T ss_pred EEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCC----CcceEEEEEECCCCCCCCCCCCCCCcc-cccccccchhhh
Confidence 999999999999998654 3 38999998754332 366789999987643222344433321 021222222223
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCC-CCCCC
Q 007735 342 IRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD-FPTKP 420 (591)
Q Consensus 342 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~-~~~~p 420 (591)
++.++.+..+.+.|..++.+...++++++.+.... ...+|..+|+|||++|..|++|++++.++++++.+..+ ++..|
T Consensus 327 ~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p 405 (545)
T PLN02168 327 IRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDV-MLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYP 405 (545)
T ss_pred hhhcCCCCCCCCCCcccccccccccceeEEecccc-cccCceEEEEECCCccCCCCCchhhhhhcccccccccCCCccCC
Confidence 33344443444555554444445566666655421 12356788999999999999999887766554444433 44444
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
.+.....+++++.+++|++|||+|+|.....||||||||+||||++|.|.|++..+..||+.||++|||+.|+++||++|
T Consensus 406 ~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vI 485 (545)
T PLN02168 406 SNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAI 485 (545)
T ss_pred CcCccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCceEEEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEE
Confidence 33223345788999999999999999988899999999999999999999987666689999999999999999999999
Q ss_pred EEEeCCccceeeecccccchhccceEEEEEe-----cCCCC-CCCCCCCCCCcccccC
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVV-----NPEAT-NKTEFPIPDNALFCGA 552 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V~-----~p~~~-~~~~~~~p~~~~~c~~ 552 (591)
||++||||+|+|||||..|||.||+++++|. +|++. .+++.++|++.++||.
T Consensus 486 RF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~P~~~~~cg~ 543 (545)
T PLN02168 486 LIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGK 543 (545)
T ss_pred EEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccCCChhhccccc
Confidence 9999999999999999999999999999985 44444 2445679999999974
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-101 Score=847.25 Aligned_cols=510 Identities=28% Similarity=0.517 Sum_probs=392.7
Q ss_pred ceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCc
Q 007735 26 LFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCP 104 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~ 104 (591)
.+|+|+|+|++++++|||+++++|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|++++|+||+++ ||||
T Consensus 2 ~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~p 81 (539)
T TIGR03389 2 EVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQCP 81 (539)
T ss_pred ceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccCC
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHH-HHhhcC
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALR-KTLDAG 183 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~-~~~~~~ 183 (591)
|+||++|+|+|++++|+||||||||...|+ +||+|+|||++++..+.|++.+|+|++|+|+||++++...+. .....+
T Consensus 82 I~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (539)
T TIGR03389 82 IQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160 (539)
T ss_pred cCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence 999999999999967999999999998776 599999999998766667777799999999999998765543 334445
Q ss_pred CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 184 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
....++|.+||||+.....+|+. ...+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+++
T Consensus 161 ~~~~~~d~~liNG~~~~~~~~~~----~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~ 236 (539)
T TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSS----KDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKT 236 (539)
T ss_pred CCCCccceEEECCCcCCCCCCCC----CCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCe
Confidence 44557799999999754333331 23578999999999999999999999999999999999999999999999999
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccc
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIR 343 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 343 (591)
+.|++||||||+|++++++| +|||++.....+.....+....|||+|.++........+..|... +..........+.
T Consensus 237 l~i~~GqRydVlv~a~~~~g-~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~l~ 314 (539)
T TIGR03389 237 IVIGPGQTTNVLLTADQSPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYN-DTAAATNFSNKLR 314 (539)
T ss_pred EEecCCCEEEEEEECCCCCc-eEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCC-chhhhhHHHhhcc
Confidence 99999999999999998888 999999865332211234568899999875421111011111110 1000100000111
Q ss_pred cccccCCCCCCCCCCCCcCccceeEEEEEecCCC---------cccCC-eeEEEEcCeeccCCCCchhhhcccccccccc
Q 007735 344 WNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP---------EMIDG-KRRATLSGISFVNPSTPIRLADWFKVKGAYK 413 (591)
Q Consensus 344 ~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~---------~~~~g-~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~ 413 (591)
....+..+...|. .+++++.+..... ...++ ..+|+|||++|..|++|++.+.+.++++.+.
T Consensus 315 ~~~~~~~~~~~p~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~ 386 (539)
T TIGR03389 315 SLNSAQYPANVPV--------TIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFT 386 (539)
T ss_pred cccccCCCCCCCC--------CCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccc
Confidence 0000000000111 1233332222110 01122 4679999999999999988766555555443
Q ss_pred CCCCCCCC------------CCCCCcceEEEeccCCcEEEEEEecCC---CcceeeeecCceEEEEEEcCCCCCCCC-CC
Q 007735 414 LDFPTKPV------------TGPPRMETSVINGTYRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTDNS-RG 477 (591)
Q Consensus 414 ~~~~~~p~------------~~~~~~~~~v~~~~~g~~ve~vl~N~~---~~~HPfHlHG~~F~Vv~~g~g~~~~~~-~~ 477 (591)
.+++..+. +-..+.+++++.+++|++|||+|+|.+ ...||||||||+||||++|.|.|+... ..
T Consensus 387 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~ 466 (539)
T TIGR03389 387 TDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPA 466 (539)
T ss_pred cCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCcc
Confidence 33222111 001233678899999999999999975 448999999999999999999887542 23
Q ss_pred CCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccc
Q 007735 478 TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFC 550 (591)
Q Consensus 478 ~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c 550 (591)
.+|+.||++|||+.|+++||++|||++||||.|+|||||..|+..||++.|.+...+.......++|++++.|
T Consensus 467 ~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 467 KFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred ccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 6899999999999999999999999999999999999999999999999998876544444567899999998
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-101 Score=843.68 Aligned_cols=509 Identities=29% Similarity=0.522 Sum_probs=389.1
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
+++++|+|+|++..++|||+++++++|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|++++|+||+++ ||
T Consensus 21 ~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~gvtq 100 (574)
T PLN02191 21 AAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQ 100 (574)
T ss_pred cceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCcccc
Confidence 46899999999999999999999999999999999999999999999999998 78999999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhc
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDA 182 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 182 (591)
|||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||+++.....++ .+|+|++|+|+|||++........+..
T Consensus 101 ~pI~PG~s~~Y~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 178 (574)
T PLN02191 101 CAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERL-RYDGEFNLLLSDWWHESIPSQELGLSS 178 (574)
T ss_pred CCcCCCCeEEEEEEC-CCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCC-CCCeeEEEeeeccccCChHHHHHhhcc
Confidence 999999999999999 589999999999999999999999999765433333 469999999999999864432222221
Q ss_pred --CCCCCCCceEEEcCcCCCCCCCccC--------------CCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCee
Q 007735 183 --GKGLGMPDGVLINGKGPYQYNTTLV--------------PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNL 246 (591)
Q Consensus 183 --~~~~~~~~~~lING~~~~~~~~~~~--------------~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 246 (591)
....++++++||||++.+.|..+.. ...+...+++|++||+|||||||+|..+.+.|+|+||+|
T Consensus 179 ~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~ 258 (574)
T PLN02191 179 KPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKL 258 (574)
T ss_pred CCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCeE
Confidence 1223568999999999887743210 012333479999999999999999999999999999999
Q ss_pred EEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCC--CCCCCC
Q 007735 247 LLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA--RGPLPE 324 (591)
Q Consensus 247 ~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--~~~~p~ 324 (591)
+|||+||.+++|+.+++|.|++||||||+|+++++++++||||+....... ......|||+|.+..... +.+.+.
T Consensus 259 tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~---~~~~~~ail~Y~~~~~~~~p~~~~~~ 335 (574)
T PLN02191 259 VVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKP---NTTQALTILNYVTAPASKLPSSPPPV 335 (574)
T ss_pred EEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCC---CCCCceEEEEECCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999876548999997643221 123356999998754211 111111
Q ss_pred CCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhc
Q 007735 325 GPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLAD 404 (591)
Q Consensus 325 ~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~ 404 (591)
.|... +.... ......+......+.+.. ...++++.+.... ..++..+|++||++|..|++|+|++.
T Consensus 336 ~p~~~-~~~~~----~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~--~~~~~~~~~~n~~s~~~p~~P~L~~~ 402 (574)
T PLN02191 336 TPRWD-DFERS----KNFSKKIFSAMGSPSPPK------KYRKRLILLNTQN--LIDGYTKWAINNVSLVTPATPYLGSV 402 (574)
T ss_pred CCccc-ccchh----hcccccccccccCCCCCC------cccceEEEecccc--eeCCeEEEEECcccCcCCCcchHHHH
Confidence 11110 10100 111111111000111110 1123444443221 23456689999999999999998876
Q ss_pred cccccccccCCCCCC----------C-CCCCCCcceEEEeccCCcEEEEEEecCC------CcceeeeecCceEEEEEEc
Q 007735 405 WFKVKGAYKLDFPTK----------P-VTGPPRMETSVINGTYRGFMEVILQNND------TKMHAYHMSGYAFFVVGMD 467 (591)
Q Consensus 405 ~~~~~g~~~~~~~~~----------p-~~~~~~~~~~v~~~~~g~~ve~vl~N~~------~~~HPfHlHG~~F~Vv~~g 467 (591)
+.+.++.|+.+.+.. + .....+.+++++.+++|++|||+|+|.+ ...||||||||+||||++|
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~G 482 (574)
T PLN02191 403 KYNLKLGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYG 482 (574)
T ss_pred hhccCcccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEec
Confidence 654444443321110 0 0011234678899999999999999985 5689999999999999999
Q ss_pred CCCCCCC-CCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCC
Q 007735 468 YGEWTDN-SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDN 546 (591)
Q Consensus 468 ~g~~~~~-~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~ 546 (591)
.|.|+++ ....||+.||++|||+.|+++||++|||++||||+|+|||||+.|+..||++.|. +.+++ ..++|++
T Consensus 483 ~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~-e~~~~----~~~~p~~ 557 (574)
T PLN02191 483 DGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA-EGLNR----IGKIPDE 557 (574)
T ss_pred CCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEe-cChhh----ccCCCcc
Confidence 9999863 2246899999999999999999999999999999999999999999999999884 34433 2447899
Q ss_pred cccccCcCCC
Q 007735 547 ALFCGALSHL 556 (591)
Q Consensus 547 ~~~c~~~~~~ 556 (591)
.+.|+.+++.
T Consensus 558 ~~~C~~~~~~ 567 (574)
T PLN02191 558 ALGCGLTKQF 567 (574)
T ss_pred hhhhhccccc
Confidence 9999977553
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-99 Score=833.21 Aligned_cols=528 Identities=30% Similarity=0.505 Sum_probs=401.1
Q ss_pred CchhhhhHHHHHHHHHHhhhcccCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECC-CCC
Q 007735 1 MALCRGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DES 79 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~ 79 (591)
|.++++|+++ +++ ++...+++.+++|+|+|+++.++|||+++++|+|||++|||+|++++||+|+|+|+|+| +++
T Consensus 2 ~~~~~~~~~~-~~~---~~~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~ 77 (566)
T PLN02604 2 MRFLALFFLL-FSV---LNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTEN 77 (566)
T ss_pred hhhhhHHHHH-HHH---HHhhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCC
Confidence 4455555444 222 23344556789999999999999999999999999999999999999999999999998 589
Q ss_pred ceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCC
Q 007735 80 LLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPD 158 (591)
Q Consensus 80 ~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d 158 (591)
++|||||+++.+++|+||+++ +||+|+||++++|+|++ +|+||||||||.+.|+.+||+|+|||++++..+.|+ .+|
T Consensus 78 ~~iH~HG~~~~~~~~~DG~~~~tq~~i~pg~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d 155 (566)
T PLN02604 78 VAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPF-SYD 155 (566)
T ss_pred CCEEeCCCCCCCCccccCCCccccCccCCCCeEEEEEEc-CCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCcc-ccC
Confidence 999999999999999999998 99999999999999999 699999999999999999999999999987655566 468
Q ss_pred CcceEEecccccCchHHHHHHhhcC--CCCCCCceEEEcCcCCCCCCCcc-----------CCCCCcceeEEEecCCEEE
Q 007735 159 GDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPYQYNTTL-----------VPDGIDYETIEVHPGKTYR 225 (591)
Q Consensus 159 ~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~~~-----------~~~~~~~~~~~v~~G~~~r 225 (591)
.|.+|+|+||+++...++...+... ....++++++|||++.++|.... ....+..+.++|++||+||
T Consensus 156 ~d~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~R 235 (566)
T PLN02604 156 YDRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYR 235 (566)
T ss_pred cceEEEeeccccCCHHHHHHhhccCCCccCCCCCceEEcCCCCCCCccccCccccccccccCCCCCCceEEEecCCCEEE
Confidence 8999999999998765443322211 12246899999999988774221 1112345689999999999
Q ss_pred EEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcce
Q 007735 226 IRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTG 305 (591)
Q Consensus 226 lRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~ 305 (591)
|||||+|..+.+.|+|+||+|+|||+||.+++|+.++.|.|++||||||+|+++++++++||||+....... ....+
T Consensus 236 lRlINa~~~~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~---~~~~~ 312 (566)
T PLN02604 236 LRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNN---TTPPG 312 (566)
T ss_pred EEEEeccccceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCC---CCcce
Confidence 999999999999999999999999999999999999999999999999999999876558999986543211 23567
Q ss_pred EEEEEecCCCCCCCCCC--CCCCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCe
Q 007735 306 VAILHYTNSKGKARGPL--PEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGK 383 (591)
Q Consensus 306 ~ail~y~~~~~~~~~~~--p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 383 (591)
.|||+|.+.......+. +..+... +.....++...++.. .. .+. ......++++.+..... ..++.
T Consensus 313 ~aIL~Y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~---~~~------~~~~~~d~~~~~~~~~~-~~~~~ 380 (566)
T PLN02604 313 LAIFNYYPNHPRRSPPTVPPSGPLWN-DVEPRLNQSLAIKAR-HG---YIH------PPPLTSDRVIVLLNTQN-EVNGY 380 (566)
T ss_pred eEEEEECCCCCCCCCCCCCCCCCccc-ccchhhcchhccccc-cc---CcC------CCCCCCCeEEEEecccc-ccCCe
Confidence 89999986432111110 1111110 000011111111000 00 000 01123455555433221 23456
Q ss_pred eEEEEcCeeccCCCCchhhhccccccccccCCC-CC-----------CCCCCCCCcceEEEeccCCcEEEEEEecCC---
Q 007735 384 RRATLSGISFVNPSTPIRLADWFKVKGAYKLDF-PT-----------KPVTGPPRMETSVINGTYRGFMEVILQNND--- 448 (591)
Q Consensus 384 ~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~-~~-----------~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~--- 448 (591)
.+|+|||++|..|++|+|++.+...++.|+.+. +. .......+.+.+++.++.|++||++|+|.+
T Consensus 381 ~~w~in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~ 460 (566)
T PLN02604 381 RRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMN 460 (566)
T ss_pred EEEEECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCcccc
Confidence 789999999998999998776654455554221 10 001112344677899999999999999975
Q ss_pred ---CcceeeeecCceEEEEEEcCCCCCCCC-CCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccc
Q 007735 449 ---TKMHAYHMSGYAFFVVGMDYGEWTDNS-RGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQ 524 (591)
Q Consensus 449 ---~~~HPfHlHG~~F~Vv~~g~g~~~~~~-~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM 524 (591)
...||||||||+||||++|.|.|+... ...||+.||++|||+.|+++||++|||++||||.|+|||||+.|+..||
T Consensus 461 ~~~~~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM 540 (566)
T PLN02604 461 ANNSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGM 540 (566)
T ss_pred CCCCCCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCC
Confidence 457999999999999999999887543 3479999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCCcccccCcC
Q 007735 525 ETYVRVVNPEATNKTEFPIPDNALFCGALS 554 (591)
Q Consensus 525 ~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~ 554 (591)
++++... +++ ..++|++++.|+..+
T Consensus 541 ~~v~~e~-~~~----~~~~p~~~~~C~~~~ 565 (566)
T PLN02604 541 GVVFEEG-IER----VGKLPSSIMGCGESK 565 (566)
T ss_pred EEEEeeC-hhh----ccCCCCCcCccccCC
Confidence 9999653 332 356889999998554
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-98 Score=820.70 Aligned_cols=502 Identities=29% Similarity=0.528 Sum_probs=386.1
Q ss_pred eEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CCCc
Q 007735 27 FVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNCP 104 (591)
Q Consensus 27 ~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~~ 104 (591)
+|+|+|+|+++.++|||+++++++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++||||+++ +||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 489999999999999999999999999999999999999999999999995 88999999999999999999998 9999
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhc-C
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDA-G 183 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~-~ 183 (591)
|+||++|+|+|++ +|+||||||||.+.|+++||+|+|||+++...+.|+ .+|+|++|+|+||+++...+....+.. .
T Consensus 81 I~PG~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 158 (541)
T TIGR03388 81 INPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKP 158 (541)
T ss_pred cCCCCEEEEEEEc-CCCEEEEEEecchHHhhccceEEEEEecCCCCCCCc-cccceEEEEeecccCCCHHHHHhhcccCC
Confidence 9999999999999 689999999999999999999999999986545555 458999999999999876543322221 1
Q ss_pred -CCCCCCceEEEcCcCCCCCCCccC-------------CCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE
Q 007735 184 -KGLGMPDGVLINGKGPYQYNTTLV-------------PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (591)
Q Consensus 184 -~~~~~~~~~lING~~~~~~~~~~~-------------~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 249 (591)
....+++.++|||++.++|..... ...+....++|++||+|||||||+|..+.+.|+|+||+|+||
T Consensus 159 ~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VI 238 (541)
T TIGR03388 159 MRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVV 238 (541)
T ss_pred CcCCCCCcceEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEE
Confidence 122468999999999877743210 112234569999999999999999999999999999999999
Q ss_pred eecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCC--CCCCCCCC
Q 007735 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKAR--GPLPEGPN 327 (591)
Q Consensus 250 a~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~--~~~p~~p~ 327 (591)
|+||.+++|..++.|.|++||||||+|++++.++++|||++...... .......|||+|.++..... .+.+..|.
T Consensus 239 a~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~---~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~ 315 (541)
T TIGR03388 239 EADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRK---PNTPPGLTVLNYYPNSPSRLPPTPPPVTPA 315 (541)
T ss_pred EeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCC---CCCccEEEEEEECCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987655899998764321 12345789999987542210 11111121
Q ss_pred CCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhcccc
Q 007735 328 DEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFK 407 (591)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~ 407 (591)
.. +..... .....+......+.+. ...++++.+..... ..++..+|++||++|..|+.|+|.+.+++
T Consensus 316 ~~-~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~n~~s~~~p~~p~l~~~~~~ 382 (541)
T TIGR03388 316 WD-DFDRSK----AFSLAIKAAMGSPKPP-------ETSDRRIVLLNTQN-KINGYTKWAINNVSLTLPHTPYLGSLKYN 382 (541)
T ss_pred cc-ccchhh----ccchhhhccccCCCCC-------CCCCcEEEEeccCc-ccCceEEEEECcccCCCCCccHHHHHhhc
Confidence 10 100000 0000010000011111 12344544333211 23455689999999998999998776554
Q ss_pred ccccccCCCC-----------CCCCCCCCCcceEEEeccCCcEEEEEEecCC------CcceeeeecCceEEEEEEcCCC
Q 007735 408 VKGAYKLDFP-----------TKPVTGPPRMETSVINGTYRGFMEVILQNND------TKMHAYHMSGYAFFVVGMDYGE 470 (591)
Q Consensus 408 ~~g~~~~~~~-----------~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~------~~~HPfHlHG~~F~Vv~~g~g~ 470 (591)
..+.|+.+.+ ..+.....+.+++++.++.|++||++|+|.+ ...||||||||+||||++|.|.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~ 462 (541)
T TIGR03388 383 LLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGK 462 (541)
T ss_pred CCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCC
Confidence 4333332110 0111123345678899999999999999974 4579999999999999999998
Q ss_pred CCCC-CCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCccc
Q 007735 471 WTDN-SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALF 549 (591)
Q Consensus 471 ~~~~-~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~ 549 (591)
|+.. ....+|+.||++|||+.|+++||++|||++||||.|+|||||+.|+..||+++|... +++ ...+|++++.
T Consensus 463 ~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-~~~----~~~~P~~~~~ 537 (541)
T TIGR03388 463 FRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VEK----VGKLPKEALG 537 (541)
T ss_pred CCcccCcccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEecc-ccc----cCCCCccccC
Confidence 8743 234699999999999999999999999999999999999999999999999999643 332 3558999999
Q ss_pred cc
Q 007735 550 CG 551 (591)
Q Consensus 550 c~ 551 (591)
|+
T Consensus 538 C~ 539 (541)
T TIGR03388 538 CG 539 (541)
T ss_pred CC
Confidence 97
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-96 Score=801.37 Aligned_cols=489 Identities=23% Similarity=0.400 Sum_probs=372.0
Q ss_pred EEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CCCccC
Q 007735 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNCPIP 106 (591)
Q Consensus 29 ~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~~I~ 106 (591)
.|+|+|++..++|||+++++++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|+.++||||+|+ |||||+
T Consensus 10 ~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI~ 89 (538)
T TIGR03390 10 DHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPIP 89 (538)
T ss_pred cEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCCC
Confidence 5899999999999999999999999999999999999999999999997 89999999999999999999999 999999
Q ss_pred CCCcEEEEEEeC-CceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcCC-
Q 007735 107 PKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK- 184 (591)
Q Consensus 107 PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~- 184 (591)
||++|+|+|+++ +|+||||||||.+.|+. ||+|+|||++++.. ++ .+|+|++|+|+||+++...++...+..+.
T Consensus 90 PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~~--~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~ 165 (538)
T TIGR03390 90 PGHFFDYEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEPP--PY-KYDDERILLVSDFFSATDEEIEQGLLSTPF 165 (538)
T ss_pred CCCcEEEEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCcc--CC-CccCcEEEEEeCCCCCCHHHHHhhhhccCC
Confidence 999999999985 58999999999999987 59999999987543 33 35899999999999998776544333221
Q ss_pred -CCCCCceEEEcCcCCCCCCCccC--CCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCe-eEEEeecCCceeeee
Q 007735 185 -GLGMPDGVLINGKGPYQYNTTLV--PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHN-LLLAETEGSYTVQQN 260 (591)
Q Consensus 185 -~~~~~~~~lING~~~~~~~~~~~--~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~-~~via~DG~~~~p~~ 260 (591)
..++++.+||||+..+.|..... ...|..+.++|++||+|||||||+|..+.+.|+|+||+ |+|||+||.+++|+.
T Consensus 166 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~~ 245 (538)
T TIGR03390 166 TWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAK 245 (538)
T ss_pred ccCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCceE
Confidence 23467899999997655422111 12345689999999999999999999999999999999 999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCC-------CCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQN-------ASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~-------~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 333 (591)
+++|.|++||||||+|+++++ ++ +||||+.....++ ...+.|||+|.++........|..+.. ...
T Consensus 246 v~~l~l~~GqRydVlv~~~~~~~~~~~~~~-~Y~ir~~~~~~~~----~~~~~aiL~Y~~~~~~~~~~~p~~~~~--~~~ 318 (538)
T TIGR03390 246 IDHLQLGGGQRYSVLFKAKTEDELCGGDKR-QYFIQFETRDRPK----VYRGYAVLRYRSDKASKLPSVPETPPL--PLP 318 (538)
T ss_pred eCeEEEccCCEEEEEEECCCccccccCCCC-cEEEEEeecCCCC----cceEEEEEEeCCCCCCCCCCCCCCCCC--Ccc
Confidence 999999999999999999975 35 9999997643222 256789999986532211111111110 000
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCc-ccCCeeEEEEcCeeccC--CCCchhhhccccccc
Q 007735 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE-MIDGKRRATLSGISFVN--PSTPIRLADWFKVKG 410 (591)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~-~~~g~~~~~iNg~s~~~--p~~P~l~~~~~~~~g 410 (591)
.......+ .++.+......+. +. ....+++++.+...... ..++..+|+|||++|.. |++|+|.+.+.+...
T Consensus 319 ~~~~~~~~--~~l~pl~~~~~~~--~~-~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~~~ 393 (538)
T TIGR03390 319 NSTYDWLE--YELEPLSEENNQD--FP-TLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENGLP 393 (538)
T ss_pred Ccchhhhh--eeeEecCccccCC--CC-CCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCCCC
Confidence 00000111 1121111100000 00 01235667666654321 12567899999999985 789998765432100
Q ss_pred cccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC--------CcceeeeecCceEEEEEEcCCCCCCCC-CCCCCC
Q 007735 411 AYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND--------TKMHAYHMSGYAFFVVGMDYGEWTDNS-RGTYNK 481 (591)
Q Consensus 411 ~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~--------~~~HPfHlHG~~F~Vv~~g~g~~~~~~-~~~~n~ 481 (591)
.. ..+...+........++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+... ...+|+
T Consensus 394 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~nl 472 (538)
T TIGR03390 394 AT-PNYTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLEN 472 (538)
T ss_pred cC-CCcccccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccChhhhcc
Confidence 00 00000001112223567888999999999999974 478999999999999999999998543 235889
Q ss_pred CCCCccceEEeC----------CCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 482 WDGIARTTTQVY----------PGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 482 ~~p~~rDTv~Vp----------p~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.||++|||+.|| ++||++|||++||||+|+|||||.+|...||++++.|.+.+
T Consensus 473 ~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~ 535 (538)
T TIGR03390 473 YTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAE 535 (538)
T ss_pred CCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCChH
Confidence 999999999996 78999999999999999999999999999999999987654
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-79 Score=665.87 Aligned_cols=430 Identities=23% Similarity=0.313 Sum_probs=320.5
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccC
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIP 106 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~ 106 (591)
++|+|++++.+++++|+.+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+|+ |||+|+
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I~ 123 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLP--FQMDGVPGVSFAGIA 123 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCC--ccccCCCcccccccC
Confidence 799999999999999999999999999999999999999999999999999999999999875 57999998 999999
Q ss_pred CCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhh-----
Q 007735 107 PKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLD----- 181 (591)
Q Consensus 107 PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~----- 181 (591)
||++|+|+|++ .++||||||||.+.|+++||+|+|||++++.. |+ .+|+|++|+|+||++.+...+...+.
T Consensus 124 PG~s~~Y~f~~-~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~--p~-~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~ 199 (587)
T TIGR01480 124 PGETFTYRFPV-RQSGTYWYHSHSGFQEQAGLYGPLIIDPAEPD--PV-RADREHVVLLSDWTDLDPAALFRKLKVMAGH 199 (587)
T ss_pred CCCeEEEEEEC-CCCeeEEEecCchhHhhccceEEEEECCCccc--cC-CCCceEEEEeeecccCCHHHHHHhhhccccc
Confidence 99999999999 58999999999999999999999999986543 33 35899999999999875544322111
Q ss_pred -----------------cCC---------C-------------CCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCC
Q 007735 182 -----------------AGK---------G-------------LGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGK 222 (591)
Q Consensus 182 -----------------~~~---------~-------------~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~ 222 (591)
.|. . .+....+||||+.. ...+++.+++|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~-----------~~~~~~~v~~G~ 268 (587)
T TIGR01480 200 DNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTP-----------AGNWTGLFRPGE 268 (587)
T ss_pred ccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccC-----------CCCceEEECCCC
Confidence 010 0 00112478999875 234679999999
Q ss_pred EEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCC
Q 007735 223 TYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKR 302 (591)
Q Consensus 223 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~ 302 (591)
+|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++.+.|++||||||+|+++ ..| .|+|++......
T Consensus 269 rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~-~~g-~~~i~a~~~~~~------ 340 (587)
T TIGR01480 269 KVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPT-GDD-AFTIFAQDSDRT------ 340 (587)
T ss_pred EEEEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecC-CCc-eEEEEEEecCCC------
Confidence 999999999999999999999999999999999999999999999999999999987 346 899998764321
Q ss_pred cceEEEEEecCCCCCCCCCCCCCCCCCc-Cccc-cc--cc-c--------cccc---------------ccccc------
Q 007735 303 VTGVAILHYTNSKGKARGPLPEGPNDEF-DKTF-SM--NQ-A--------RSIR---------------WNVSA------ 348 (591)
Q Consensus 303 ~~~~ail~y~~~~~~~~~~~p~~p~~~~-~~~~-~~--~~-~--------~~~~---------------~~l~~------ 348 (591)
....++|++.+.......+++..|.... +..- .. .. . .... .++..
T Consensus 341 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (587)
T TIGR01480 341 GYARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPA 420 (587)
T ss_pred ceEEEEEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcc
Confidence 3466788876532111111111110000 0000 00 00 0 0000 00000
Q ss_pred ----------CCCCC-----CCC--------CCCC----------cCccceeEEEEEecCCCcccCCeeEEEEcCeeccC
Q 007735 349 ----------SGARP-----NPQ--------GSFR----------YGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN 395 (591)
Q Consensus 349 ----------~~~~p-----~p~--------~~~~----------~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~ 395 (591)
.++.| .|. .... .....++|++.+... .......|+|||..|.+
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~---g~m~~~~wtiNG~~~~~ 497 (587)
T TIGR01480 421 SEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLT---GNMERFAWSFDGEAFGL 497 (587)
T ss_pred cccCCccccccccCcccccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEc---CCCceeEEEECCccCCC
Confidence 00000 000 0000 001234555555442 12235568999987531
Q ss_pred CCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCC
Q 007735 396 PSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNS 475 (591)
Q Consensus 396 p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~ 475 (591)
. ..+.++.|++|+|.|.|...+.|||||||+.|+|+..+ |.+
T Consensus 498 -~--------------------------------~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~-G~~---- 539 (587)
T TIGR01480 498 -K--------------------------------TPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQ-GEF---- 539 (587)
T ss_pred -C--------------------------------CceEecCCCEEEEEEECCCCCCcceeEcCceeeeecCC-Ccc----
Confidence 1 11346789999999999999999999999999998653 211
Q ss_pred CCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 476 RGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 476 ~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+.++||+.|+|++++.++|++||||.|+||||++.|++.|||..++|.
T Consensus 540 --------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 540 --------QVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred --------cccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 457899999999999999999999999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=634.44 Aligned_cols=441 Identities=16% Similarity=0.166 Sum_probs=302.2
Q ss_pred eEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCcc
Q 007735 27 FVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPI 105 (591)
Q Consensus 27 ~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I 105 (591)
...|+|++++...+++|. ..++|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++.+ .+||+| ||+|
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~~--~~DG~p--q~~I 120 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPG--EVDGGP--QGII 120 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCCC--ccCCCC--CCCC
Confidence 346999999999999864 45799999999999999999999999999999999999999999864 599987 8999
Q ss_pred CCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHHH
Q 007735 106 PPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRKT 179 (591)
Q Consensus 106 ~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~~ 179 (591)
.||++|+|+|++++++||||||||. +.|+.+||+|+|||+++++.+.+++ ...+|++|+|+||+++.++++...
T Consensus 121 ~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~ 200 (523)
T PRK10965 121 APGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQ 200 (523)
T ss_pred CCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceecc
Confidence 9999999999996568999999995 7999999999999999865433332 245699999999999866654322
Q ss_pred hhcC--CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCce
Q 007735 180 LDAG--KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSYT 256 (591)
Q Consensus 180 ~~~~--~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~ 256 (591)
.+.. .....+|.++|||+.+ |.+.++ +++|||||||+|+.+.+.|++ ++|+|+|||+||+++
T Consensus 201 ~~~~~~~~g~~gd~~lVNG~~~--------------p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l 265 (523)
T PRK10965 201 LDVMTAAVGWFGDTLLTNGAIY--------------PQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLL 265 (523)
T ss_pred ccccccccCccCCeEEECCccc--------------ceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcc
Confidence 2211 1123578999999986 778875 579999999999999999998 899999999999986
Q ss_pred -eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeeccccc-ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccc
Q 007735 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE-SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTF 334 (591)
Q Consensus 257 -~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 334 (591)
+|..+++|.|+|||||||+|++++ ++ +|.+.+....... ..........++++.........++|......-....
T Consensus 266 ~~P~~v~~l~lapGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~ 343 (523)
T PRK10965 266 AEPVKVSELPILMGERFEVLVDTSD-GK-AFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPS 343 (523)
T ss_pred cCccEeCeEEECccceEEEEEEcCC-Cc-eEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCc
Confidence 699999999999999999999985 45 8888876432111 0000111334555543221111122211000000000
Q ss_pred -ccccccccccccccCCC-------C-CCCCCCCCcCccce--e-EEE------EEecC---CCcccCCeeEEEEcCeec
Q 007735 335 -SMNQARSIRWNVSASGA-------R-PNPQGSFRYGSINV--T-EVY------VLRNK---PPEMIDGKRRATLSGISF 393 (591)
Q Consensus 335 -~~~~~~~~~~~l~~~~~-------~-p~p~~~~~~~~~~~--~-~~~------~l~~~---~~~~~~g~~~~~iNg~s~ 393 (591)
.....+.+...+..... . ....+. .+.... + ..+ .+... .....+....|+|||++|
T Consensus 344 ~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~ 421 (523)
T PRK10965 344 LEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQA--MAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAF 421 (523)
T ss_pred ccccceeEEEEeeccccchhhhhhccccccccc--cccccccccccccccccccccccccccccccccccccccCCCeEC
Confidence 00001111111100000 0 000000 000000 0 000 00000 000000001247788776
Q ss_pred cCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCC
Q 007735 394 VNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWT 472 (591)
Q Consensus 394 ~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~ 472 (591)
... . ..+.++.|++++|.|.|.+. +.|||||||++|||+++++...
T Consensus 422 ~~~-~-------------------------------~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~- 468 (523)
T PRK10965 422 DMN-K-------------------------------PMFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP- 468 (523)
T ss_pred CCC-C-------------------------------cceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEecCCCC-
Confidence 421 1 11346789999999999875 6899999999999999964321
Q ss_pred CCCCCCCCCCCCCccceEEeCCCcEEEEEEEe----CCccceeeecccccchhccceEEEEEe
Q 007735 473 DNSRGTYNKWDGIARTTTQVYPGAWTAILVSL----DNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 473 ~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a----dNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
...++.|||||.|+| +.+.|++++ ||+|.|+||||||+|||.|||..|+|.
T Consensus 469 -------~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~~~V~ 523 (523)
T PRK10965 469 -------AAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLGFTVS 523 (523)
T ss_pred -------CccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCccceeEeC
Confidence 122468999999988 666665555 567899999999999999999999884
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-73 Score=611.57 Aligned_cols=404 Identities=16% Similarity=0.194 Sum_probs=294.9
Q ss_pred EEEEEEEEEEecCC-CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCC
Q 007735 29 YFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPP 107 (591)
Q Consensus 29 ~~~~~v~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~P 107 (591)
.++|+++.....++ |.++++|+|||++|||+||+++||+|+|+|+|+|+++|++||||+++... .+||++ ++|.|
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~~---~~I~P 122 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGPA---RMMSP 122 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCcc---ccCCC
Confidence 37999999998888 46789999999999999999999999999999999999999999998764 577765 88999
Q ss_pred CCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHHHhh
Q 007735 108 KWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 108 G~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~~~~ 181 (591)
|++|+|+|++.+++||||||||. +.|+.+||+|+|||+++.+.+.+++ ...+|++|+|+||+++........ .
T Consensus 123 G~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~-~ 201 (471)
T PRK10883 123 NADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYN-E 201 (471)
T ss_pred CCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccc-c
Confidence 99999999986679999999995 4699999999999999765443432 234599999999999865432211 1
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCce-eee
Q 007735 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSYT-VQQ 259 (591)
Q Consensus 182 ~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p~ 259 (591)
.......+|.++|||+.. |.++|++| +|||||||+|+.+.+.|+| ++|+|+|||+||+++ +|.
T Consensus 202 ~~~~g~~gd~~lvNG~~~--------------p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~ 266 (471)
T PRK10883 202 PGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPV 266 (471)
T ss_pred cccCCccCCeeEECCccC--------------CeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCc
Confidence 111234678999999986 88999874 7999999999999999999 899999999997775 699
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeeccccc----ccCCC---cceEEEEEecCCCCCCCCCCCCCCCCCcCc
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE----SQWKR---VTGVAILHYTNSKGKARGPLPEGPNDEFDK 332 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~----~~~~~---~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 332 (591)
.++++.|+|||||||+|++++ ++ .+.+.+....... ..... .....+++....... .+.+ .
T Consensus 267 ~~~~l~l~pGeR~dvlVd~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------- 334 (471)
T PRK10883 267 SVKQLSLAPGERREILVDMSN-GD-EVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLL--PLVT-D------- 334 (471)
T ss_pred EeCeEEECCCCeEEEEEECCC-Cc-eEEEECCCccccccccccccCCccccccceeEEEEccccc--cCCC-C-------
Confidence 999999999999999999975 34 6666553211000 00000 001122232211000 0000 0
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccc
Q 007735 333 TFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAY 412 (591)
Q Consensus 333 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~ 412 (591)
.++..+.... +.+. ...-++++.+.. ..|.|||.+|.+...
T Consensus 335 --------~~p~~l~~~~--~~~~------~~~~~~~~~l~~---------~~~~INg~~~~~~~~-------------- 375 (471)
T PRK10883 335 --------NLPMRLLPDE--IMEG------SPIRSREISLGD---------DLPGINGALWDMNRI-------------- 375 (471)
T ss_pred --------cCChhhcCCC--CCCC------CCcceEEEEecC---------CcCccCCcccCCCcc--------------
Confidence 0000011000 0000 011123333321 136799998753111
Q ss_pred cCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEe
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV 492 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V 492 (591)
.+.++.|++++|.|.|. +.|||||||+.|||+++++... ...+..|||||.|
T Consensus 376 ------------------~~~~~~g~~e~W~~~n~--~~HP~HlHg~~FqVl~~~G~~~--------~~~~~gwkDTV~v 427 (471)
T PRK10883 376 ------------------DVTAQQGTWERWTVRAD--MPQAFHIEGVMFLIRNVNGAMP--------FPEDRGWKDTVWV 427 (471)
T ss_pred ------------------eeecCCCCEEEEEEECC--CCcCEeECCccEEEEEecCCCC--------CccccCcCcEEEc
Confidence 12457899999999886 6899999999999999964311 1123479999999
Q ss_pred CCCcEEEEEEEeCCcc----ceeeecccccchhccceEEEEEecC
Q 007735 493 YPGAWTAILVSLDNVG----IWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 493 pp~g~~~irf~adNpG----~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
+ +.+.|++++|++| .||||||||+|||.|||..|+|..|
T Consensus 428 ~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~~ 470 (471)
T PRK10883 428 D--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNPA 470 (471)
T ss_pred C--CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEecC
Confidence 6 4599999999988 8999999999999999999999753
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-59 Score=501.63 Aligned_cols=399 Identities=23% Similarity=0.263 Sum_probs=288.1
Q ss_pred cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeC
Q 007735 40 SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 40 ~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~ 118 (591)
..++.....+++||++|||+|++++||+|+++++|+|.++|++||||+..+ +.+||++. +++++.||++++|.|+.
T Consensus 46 ~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p--~~~dG~~~~~~~~~~~~~~~~y~f~~- 122 (451)
T COG2132 46 FAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGETPTYTFTQ- 122 (451)
T ss_pred eecCCCceeEEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccC--ccccCCCcccccCCCCCCcEEEeecC-
Confidence 445677889999999999999999999999999999988899999998765 78999988 99999999999999998
Q ss_pred CceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcC
Q 007735 119 DQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKG 198 (591)
Q Consensus 119 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~ 198 (591)
+++||||||+|.+.|+.+||+|++||++....+. ..|++..++..+|+.......... .........+..+|||+.
T Consensus 123 ~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~---~~d~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~vnG~~ 198 (451)
T COG2132 123 DVPGTYWYHPHTHGQVYDGLAGALIIEDENSEPL---GVDDEPVILQDDWLDEDGTDLYQE-GPAMGGFPGDTLLVNGAI 198 (451)
T ss_pred CCCcceEeccCCCchhhcccceeEEEeCCCCCCC---CCCceEEEEEeeeecCCCCccccC-CccccCCCCCeEEECCCc
Confidence 4677999999999999999999999999765433 447777888888876644332221 011123346899999976
Q ss_pred CCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEe
Q 007735 199 PYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTM 278 (591)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~ 278 (591)
. +.+.++. ++|||||+|+++.+.+.+++.+++|+||++||.+++|..+|.+.|+|||||||++++
T Consensus 199 ~--------------p~~~~~~-g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~~ 263 (451)
T COG2132 199 L--------------PFKAVPG-GVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDM 263 (451)
T ss_pred c--------------ceeecCC-CeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEEc
Confidence 5 6666655 569999999998888999999999999999999999989999999999999999999
Q ss_pred CCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCC----CCCCCCCCcCcccccccccccccccccCCCCCC
Q 007735 279 DQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGP----LPEGPNDEFDKTFSMNQARSIRWNVSASGARPN 354 (591)
Q Consensus 279 ~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~----~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~ 354 (591)
++ .+ .|.+.+......+ ...+........ ..+.+ ....+.. +. ..... ...+.... +.
T Consensus 264 ~~-~~-~~~l~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--d~---~~~~~--~~~~~~~~--~~ 325 (451)
T COG2132 264 ND-GG-AVTLTALGEDMPD------TLKGFRAPNPIL-TPSYPVLNGRVGAPTG--DM---ADHAP--VGLLVTIL--VE 325 (451)
T ss_pred CC-CC-eEEEEeccccCCc------eeeeeecccccc-ccccccccccccCCCc--ch---hhccc--cccchhhc--CC
Confidence 95 44 6777765521111 111111111100 00000 0000100 00 00000 00000000 00
Q ss_pred CCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEec
Q 007735 355 PQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVING 434 (591)
Q Consensus 355 p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~ 434 (591)
+. ......+.+. ...+...|.+|+..|.+. ...+.+
T Consensus 326 ~~-------~~~~~~~~l~-----~~~~~~~~~~n~~~~~~~--------------------------------~~~~~~ 361 (451)
T COG2132 326 PG-------PNRDTDFHLI-----GGIGGYVWAINGKAFDDN--------------------------------RVTLIA 361 (451)
T ss_pred Cc-------ccccccchhh-----cccccccccccCccCCCC--------------------------------cCceee
Confidence 00 0001111111 111234577777665421 122456
Q ss_pred cCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeec
Q 007735 435 TYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRT 514 (591)
Q Consensus 435 ~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HC 514 (591)
+.|++++|+|.|.+.+.|||||||+.|+|++.+. ..-...+.||||+.+.|+..++++|.+|+||.|+|||
T Consensus 362 ~~G~~~~~~i~n~~~~~HP~HlHg~~F~v~~~~~---------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HC 432 (451)
T COG2132 362 KAGTRERWVLTNDTPMPHPFHLHGHFFQVLSGDA---------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHC 432 (451)
T ss_pred cCCCEEEEEEECCCCCccCeEEcCceEEEEecCC---------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEec
Confidence 7899999999999999999999999999999861 1222347899999999999999999999999999999
Q ss_pred ccccchhccceEEEEEe
Q 007735 515 ENLDSWYLGQETYVRVV 531 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~ 531 (591)
|+++|++.|||..+.|.
T Consensus 433 H~l~H~~~Gm~~~~~v~ 449 (451)
T COG2132 433 HILEHEDNGMMGQFGVV 449 (451)
T ss_pred cchhHhhcCCeeEEEec
Confidence 99999999999999875
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-48 Score=394.28 Aligned_cols=265 Identities=17% Similarity=0.164 Sum_probs=218.6
Q ss_pred ccCCceEEEEEEEEEEEec-CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITAS-PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~-~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 98 (591)
++...+++|+|++++.+.. .+|..+.+|+|||++|||+|++++||+|+|+|+|+++ .++++||||. .++||+
T Consensus 22 ~~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~-----~~~dg~ 96 (311)
T TIGR02376 22 RSGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAA-----TGALGG 96 (311)
T ss_pred cCCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCC-----CccCCC
Confidence 5566789999999999887 5799999999999999999999999999999999986 5789999996 258998
Q ss_pred CC-CCCccCCCCcEEEEEEeCCceeeeEEecC----hhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCch
Q 007735 99 LG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPS----LHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNH 173 (591)
Q Consensus 99 ~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~ 173 (591)
+. +| |.||++++|+|++ +++|||||||| +..|+.+||+|+|||++++..+ ..|+|++|+++||+++..
T Consensus 97 ~~~~~--I~PG~t~ty~F~~-~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~----~~d~e~~l~l~d~~~~~~ 169 (311)
T TIGR02376 97 AALTQ--VNPGETATLRFKA-TRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLP----EYDKEYYIGESDLYTPKD 169 (311)
T ss_pred Cccee--ECCCCeEEEEEEc-CCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCc----CcceeEEEeeeeEecccc
Confidence 76 65 9999999999998 68999999999 4689999999999999875422 458999999999999754
Q ss_pred HHHHHHhh-c-C-CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe
Q 007735 174 TALRKTLD-A-G-KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (591)
Q Consensus 174 ~~~~~~~~-~-~-~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 250 (591)
........ . + .....++.++|||+.... .+.+++++|+++||||+|++..+.+.|+++||.+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-----------~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~ 238 (311)
T TIGR02376 170 EGEGGAYEDDVAAMRTLTPTHVVFNGAVGAL-----------TGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVW 238 (311)
T ss_pred ccccccccchHHHHhcCCCCEEEECCccCCC-----------CCCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEE
Confidence 32111000 0 0 012457899999996422 25679999999999999999988999999999999999
Q ss_pred ecCCceeeee--eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 251 TEGSYTVQQN--YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 251 ~DG~~~~p~~--~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.||.++.+.. ++++.|+||||+||+|++++ +| .|+++++...... +....++++|++..
T Consensus 239 ~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~-pG-~y~~~~~~~~~~~----~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 239 VTGKFANPPNRDVETWFIPGGSAAAALYTFEQ-PG-VYAYVDHNLIEAF----EKGAAAQVKVEGAW 299 (311)
T ss_pred ECCcccCCCCCCcceEEECCCceEEEEEEeCC-Ce-EEEEECcHHHHHH----hCCCEEEEEECCCC
Confidence 9999998644 89999999999999999996 68 9999987653321 13467999998654
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=267.02 Aligned_cols=115 Identities=41% Similarity=0.788 Sum_probs=108.4
Q ss_pred EEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcE
Q 007735 33 EVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 33 ~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|++.+++++|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++...+|+||+++ +||+|.||++|
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~ 80 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESF 80 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecce
Confidence 57899999998889999999999999999999999999999999999999999999998889999998 99999999999
Q ss_pred EEEEEeCCceeeeEEecChhhhhhcCceeeEEEecC
Q 007735 112 TYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 147 (591)
+|+|++++++||||||||...|..+||+|+|||+++
T Consensus 81 ~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 81 TYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 999999766999999999988888999999999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=233.06 Aligned_cols=109 Identities=30% Similarity=0.428 Sum_probs=98.8
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS 503 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ 503 (591)
..+.++..+.++.|+++||+|+|.+...|||||||++|+|++++.+.++......+++.+|.||||+.|+++++++|||+
T Consensus 28 ~~~~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~ 107 (138)
T PF07731_consen 28 PFFGNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFR 107 (138)
T ss_dssp TSSSTTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEE
T ss_pred ccCCCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEE
Confidence 34457788999999999999999999999999999999999998877665555678999999999999999999999999
Q ss_pred eCCccceeeecccccchhccceEEEEEec
Q 007735 504 LDNVGIWNLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 504 adNpG~W~~HCHil~H~~~GM~~~~~V~~ 532 (591)
+||||.|+||||+++|++.|||..++|.+
T Consensus 108 ~~~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 108 ADNPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp ETSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred eecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 99999999999999999999999999864
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=226.58 Aligned_cols=154 Identities=32% Similarity=0.539 Sum_probs=124.6
Q ss_pred CcceEEecccccCchHHHHH-HhhcC----CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCC
Q 007735 159 GDITILIGDWYTRNHTALRK-TLDAG----KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI 233 (591)
Q Consensus 159 ~e~~l~l~d~~~~~~~~~~~-~~~~~----~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 233 (591)
+|++|+++|||++....+.. .+..+ ...+++++++|||++.++|.+... .....+.+++++|++|||||||+|.
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~-~~~~~~~~~v~~g~~~rlRliNa~~ 79 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSADY-TGGEPPVIKVKPGERYRLRLINAGA 79 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTGS-TTSTSGEEEEETTTEEEEEEEEESS
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccccc-cccccceEEEcCCcEEEEEEEeccC
Confidence 48899999999987766543 33322 236789999999999988865532 2345699999999999999999999
Q ss_pred cceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 234 STSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 234 ~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
.+.+.|+|+||+|+|||+||.+++|..++++.|++||||||+|++++++| +|+|++.............+..|||+|.+
T Consensus 80 ~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g-~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~ 158 (159)
T PF00394_consen 80 STSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPG-NYWIRASYQHDSINDPQNGNALAILRYDG 158 (159)
T ss_dssp S-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSS-EEEEEEEESSSSSHSHGGGTTEEEEEETT
T ss_pred CeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCC-eEEEEEecccCCCccCCCcEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999998677 99999973222222224578899999986
Q ss_pred C
Q 007735 314 S 314 (591)
Q Consensus 314 ~ 314 (591)
+
T Consensus 159 ~ 159 (159)
T PF00394_consen 159 A 159 (159)
T ss_dssp S
T ss_pred C
Confidence 3
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=158.63 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=84.3
Q ss_pred EecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC---CCceeeecCccCCCCCCCCCCCC-CCCccCCC---C-
Q 007735 38 TASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD---ESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPK---W- 109 (591)
Q Consensus 38 ~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~---~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG---~- 109 (591)
.....+....-+.++|. ++|+|++++||+|+|+|+|.++ .++.||+||...+..+.|||++. +||+|.|+ +
T Consensus 33 ~~~~~~~~~~~f~~~~~-~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~ 111 (148)
T TIGR03095 33 AGPMPGPSMYSFEIHDL-KNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGK 111 (148)
T ss_pred EEcCCCCCceeEEecCC-CCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCc
Confidence 33445666777888995 6999999999999999999954 45667777766554556999997 99998884 1
Q ss_pred c--EEEEEEeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 110 N--WTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 110 ~--~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
. .++.|+++ ++||||||||...|+.+||+|+|||+
T Consensus 112 ~~~~~~tf~f~-~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 112 FGYTDFTYHFS-TAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred cceeEEEEECC-CCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 1 34556653 79999999999999999999999985
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-15 Score=165.92 Aligned_cols=100 Identities=15% Similarity=0.250 Sum_probs=86.3
Q ss_pred eeeEEEEECCCCCCC--cEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC---CCCCccCCCCcEEEEEEeC
Q 007735 44 VPQQVIAINGKFPGP--TINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL---GTNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP--~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~ 118 (591)
..+.+|+|||+.+++ .|++++||+|+|+|.|.+..++.|||||+.+... ..||.. .....|.||++++|+|.+
T Consensus 483 m~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~-~~~G~~~~~~dTv~V~Pg~t~~~~f~a- 560 (587)
T TIGR01480 483 MERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELE-DGQGEFQVRKHTVDVPPGGKRSFRVTA- 560 (587)
T ss_pred CceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCceeeee-cCCCcccccCCceeeCCCCEEEEEEEC-
Confidence 457889999998874 7999999999999999999999999999976432 336642 223789999999999998
Q ss_pred CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 119 DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 119 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+++|+||||||...|...||++.+.|.
T Consensus 561 d~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 561 DALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 689999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.2e-13 Score=136.07 Aligned_cols=244 Identities=13% Similarity=0.064 Sum_probs=152.9
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~ 267 (591)
-+.+++||+.. .|.|++++|++++++|.|.... ..+.+++|++. +.||... ...|.
T Consensus 47 ~~~~~~nG~~p-------------GP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~ 103 (311)
T TIGR02376 47 YQAMTFDGSVP-------------GPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVN 103 (311)
T ss_pred EEEEEECCccc-------------CceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeEC
Confidence 35799999864 3899999999999999997532 46889999874 4576431 22389
Q ss_pred cccEEEEEEEeCCCCCcceEEEEeecc--cccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccc
Q 007735 268 VGQSYSFLVTMDQNASTDYYIVASARF--VNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWN 345 (591)
Q Consensus 268 pGqR~dvlv~~~~~~g~~y~i~~~~~~--~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 345 (591)
||+++.+.++++ .+| .||.+++... ..+. .....+.|.+.... +.+ .. |.+..+ ...+ |.
T Consensus 104 PG~t~ty~F~~~-~~G-ty~YH~H~~~~~~~q~---~~Gl~G~liV~~~~-----~~~---~~--d~e~~l-~l~d--~~ 165 (311)
T TIGR02376 104 PGETATLRFKAT-RPG-AFVYHCAPPGMVPWHV---VSGMNGAIMVLPRE-----GLP---EY--DKEYYI-GESD--LY 165 (311)
T ss_pred CCCeEEEEEEcC-CCE-EEEEEcCCCCchhHHh---hcCcceEEEeeccC-----CCc---Cc--ceeEEE-eeee--Ee
Confidence 999999999987 478 9999998532 1110 01123334433221 111 10 111111 0001 11
Q ss_pred cccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCC
Q 007735 346 VSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPP 425 (591)
Q Consensus 346 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~ 425 (591)
+...... .+.+ ..+ ... +. ... ...+.|||+.+.. .|
T Consensus 166 ~~~~~~~---~~~~-----~~~----~~~-~~-~~~-~~~~~iNG~~~~~--~~-------------------------- 202 (311)
T TIGR02376 166 TPKDEGE---GGAY-----EDD----VAA-MR-TLT-PTHVVFNGAVGAL--TG-------------------------- 202 (311)
T ss_pred ccccccc---cccc-----cch----HHH-Hh-cCC-CCEEEECCccCCC--CC--------------------------
Confidence 1100000 0000 000 000 00 011 1247788875310 00
Q ss_pred CcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceEEeCCCcEEEEEEE
Q 007735 426 RMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTTQVYPGAWTAILVS 503 (591)
Q Consensus 426 ~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv~Vpp~g~~~irf~ 503 (591)
.+.++.|+++.|.|.|.+. ..+.||++|++|++|..+++...+ +. ..||+.|.||+...|.++
T Consensus 203 -----~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~----------~~~~~~~~~i~PG~R~dv~v~ 267 (311)
T TIGR02376 203 -----DNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANP----------PNRDVETWFIPGGSAAAALYT 267 (311)
T ss_pred -----CcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCcccCC----------CCCCcceEEECCCceEEEEEE
Confidence 1245678999999999875 578999999999999996432211 22 269999999999999999
Q ss_pred eCCccceeeecccccch-hccceEEEEEe
Q 007735 504 LDNVGIWNLRTENLDSW-YLGQETYVRVV 531 (591)
Q Consensus 504 adNpG~W~~HCHil~H~-~~GM~~~~~V~ 531 (591)
+++||.|.+|||...+. ..|++..++|.
T Consensus 268 ~~~pG~y~~~~~~~~~~~~~g~~~~i~~~ 296 (311)
T TIGR02376 268 FEQPGVYAYVDHNLIEAFEKGAAAQVKVE 296 (311)
T ss_pred eCCCeEEEEECcHHHHHHhCCCEEEEEEC
Confidence 99999999999998777 77999988875
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.2e-12 Score=111.56 Aligned_cols=100 Identities=26% Similarity=0.197 Sum_probs=78.3
Q ss_pred hhhcccCCceEEEEEEEE--EEEe---cCCCeeeEEE-EECCCCCCCcEEeeCCCEEEEEEEECCCCC--ceeeecCccC
Q 007735 18 ASLCSAADLFVYFDFEVS--YITA---SPLGVPQQVI-AINGKFPGPTINVTTNNNVVVNVRNKLDES--LLIHWSGIQQ 89 (591)
Q Consensus 18 ~~~~~~~~~~~~~~~~v~--~~~~---~~dG~~~~~~-~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~--~siH~HG~~~ 89 (591)
+....|.++.++|+++|. ..++ +..|+....| ++|+++..+.|+|++||+|++++.|.-+.+ ..+++||+
T Consensus 15 ~~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi-- 92 (135)
T TIGR03096 15 LLMGTAQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKSPISEGFSIDAYGI-- 92 (135)
T ss_pred hhccchhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCCCCccceEECCCCc--
Confidence 334444555689999998 5444 4678887777 999999999999999999999999986543 34444442
Q ss_pred CCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhh
Q 007735 90 RRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHF 132 (591)
Q Consensus 90 ~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 132 (591)
+..|+||++.+|+|++ +++|+|||||-.+.
T Consensus 93 ------------s~~I~pGet~TitF~a-dKpG~Y~y~C~~HP 122 (135)
T TIGR03096 93 ------------SEVIKAGETKTISFKA-DKAGAFTIWCQLHP 122 (135)
T ss_pred ------------ceEECCCCeEEEEEEC-CCCEEEEEeCCCCC
Confidence 2468999999999998 79999999998653
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.1e-10 Score=121.53 Aligned_cols=230 Identities=15% Similarity=0.108 Sum_probs=140.8
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCCC------CCCccCCCCcEEEEEEe
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLLG------TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~~------tq~~I~PG~~~~Y~f~~ 117 (591)
...+++||+. .|.+.+. |.++++|+.|... ....+.+ .|..+. --..||.+. ....|.|||+++..+++
T Consensus 212 gd~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~-vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~ 288 (523)
T PRK10965 212 GDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLY-VIASDGGLLAEPVKVSELPILMGERFEVLVDT 288 (523)
T ss_pred CCeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEE-EEEeCCCcccCccEeCeEEECccceEEEEEEc
Confidence 4578999995 7899885 6699999999964 4456665 454322 246898542 34669999999999998
Q ss_pred CCceeeeEEecChhhhhhcC------ceeeEEEecCC---CCCCCC-----C-CC------CCcceEEecccccCchHHH
Q 007735 118 KDQVGSFFYFPSLHFQRASG------GFGGFIINNRA---IIPIPF-----D-TP------DGDITILIGDWYTRNHTAL 176 (591)
Q Consensus 118 ~~~~Gt~wYH~H~~~q~~~G------l~G~liV~~~~---~~~~p~-----~-~~------d~e~~l~l~d~~~~~~~~~ 176 (591)
. +.|.++...-...+...+ -.-.+.|.... ....|- + .. .+.+.+.+..+.- ...+
T Consensus 289 ~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~~~~--~~~m 365 (523)
T PRK10965 289 S-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPSLEGLTVRRLQLSMDPRLD--MMGM 365 (523)
T ss_pred C-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCcccccceeEEEEeeccccc--hhhh
Confidence 5 567777665422111100 11123333111 101110 0 00 0122333222100 0000
Q ss_pred HH-----------H-----------------hhcCC--CCC---CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCE
Q 007735 177 RK-----------T-----------------LDAGK--GLG---MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKT 223 (591)
Q Consensus 177 ~~-----------~-----------------~~~~~--~~~---~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~ 223 (591)
.. . ++.+. ... ....++|||+.+. .+.+.++++.|++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~----------~~~~~~~~~~G~~ 435 (523)
T PRK10965 366 QMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFD----------MNKPMFAAKKGQY 435 (523)
T ss_pred hhccccccccccccccccccccccccccccccccccccccccccccccccCCCeECC----------CCCcceecCCCCE
Confidence 00 0 00000 000 0112489999862 2347789999999
Q ss_pred EEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee---eeeeeEEEEccccEEEEEEEeCCCC---CcceEEEEeec
Q 007735 224 YRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQNA---STDYYIVASAR 293 (591)
Q Consensus 224 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~~~---g~~y~i~~~~~ 293 (591)
.+|+|+|.+....|.|||||+.|+|++.||.+.. +...|+|.+.+ +++++++++++.+ | .|.++++.-
T Consensus 436 e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g-~~~~HCHiL 509 (523)
T PRK10965 436 ERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEH-AYMAHCHLL 509 (523)
T ss_pred EEEEEEeCCCCCccCeEEeCcEEEEEEecCCCCCccccccccEEEECC-cEEEEEEEecCCCCCCC-CEEEEeCch
Confidence 9999999986557999999999999999998765 35689999976 8899999998543 5 788888764
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.7e-09 Score=115.79 Aligned_cols=222 Identities=12% Similarity=0.099 Sum_probs=133.6
Q ss_pred eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCC----C--CCCccCCCCcEEEEE
Q 007735 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLL----G--TNCPIPPKWNWTYQF 115 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f 115 (591)
....++++||+. .|.|.|+.| ++++|+.|... ....+++ +|.... --..||-+ . .+..|.||++++.-.
T Consensus 207 ~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~-vIa~DGg~~~~P~~~~~l~l~pGeR~dvlV 283 (471)
T PRK10883 207 FVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLH-VIAGDQGFLPAPVSVKQLSLAPGERREILV 283 (471)
T ss_pred ccCCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEE-EEEeCCCcccCCcEeCeEEECCCCeEEEEE
Confidence 345679999995 799999875 89999999975 4567887 565332 24578532 1 346689999999999
Q ss_pred EeCCceeeeEEecChhhhhhcCceee------------EEEecCCCCCCCCCCCCCcceEEecccccCchHHHHH-Hhhc
Q 007735 116 QVKDQVGSFFYFPSLHFQRASGGFGG------------FIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRK-TLDA 182 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H~~~q~~~Gl~G~------------liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~-~~~~ 182 (591)
++. +.+.+.+++-......+++.+. +-++...... +. ....+..+...........+. .+.-
T Consensus 284 d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~p~~l~~~~~~~~~~~~~~~~~l 358 (471)
T PRK10883 284 DMS-NGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP-LV---TDNLPMRLLPDEIMEGSPIRSREISL 358 (471)
T ss_pred ECC-CCceEEEECCCccccccccccccCCccccccceeEEEEcccccc-CC---CCcCChhhcCCCCCCCCCcceEEEEe
Confidence 984 5567777653211111111111 1111111000 00 000110000000000000000 0000
Q ss_pred CCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee---e
Q 007735 183 GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ---Q 259 (591)
Q Consensus 183 ~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p---~ 259 (591)
+ .+.++|||+.+. ...+.++++.|++++|+|.|. ..|+||||+|.|+|++.||....+ .
T Consensus 359 ~-----~~~~~INg~~~~----------~~~~~~~~~~g~~e~W~~~n~---~~HP~HlHg~~FqVl~~~G~~~~~~~~g 420 (471)
T PRK10883 359 G-----DDLPGINGALWD----------MNRIDVTAQQGTWERWTVRAD---MPQAFHIEGVMFLIRNVNGAMPFPEDRG 420 (471)
T ss_pred c-----CCcCccCCcccC----------CCcceeecCCCCEEEEEEECC---CCcCEeECCccEEEEEecCCCCCccccC
Confidence 0 123479999862 123457899999999999885 269999999999999999986543 4
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCc--ceEEEEeec
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNAST--DYYIVASAR 293 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~--~y~i~~~~~ 293 (591)
..|+|.+. +++++++++++.+++ .|.++++.-
T Consensus 421 wkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiL 454 (471)
T PRK10883 421 WKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTL 454 (471)
T ss_pred cCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccc
Confidence 57999993 479999999976653 477777653
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.7e-08 Score=110.19 Aligned_cols=234 Identities=17% Similarity=0.144 Sum_probs=141.6
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE-eecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA-ETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|+++.|+++++++.|--.. ...+|.||....-- ..||..- +..-.|.|
T Consensus 23 ~~~~~NG~~P-------------GP~i~~~~GD~v~v~v~N~l~~-~tsiHwHGl~q~~~~~~DGv~~----vTq~pI~P 84 (539)
T TIGR03389 23 SILTVNGKFP-------------GPTLYAREGDTVIVNVTNNVQY-NVTIHWHGVRQLRNGWADGPAY----ITQCPIQP 84 (539)
T ss_pred EEEEECCccc-------------CCEEEEEcCCEEEEEEEeCCCC-CeeEecCCCCCCCCCCCCCCcc----cccCCcCC
Confidence 4899999975 4999999999999999998654 45566666532211 2588652 23346899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCc-----ccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK-----TFSMNQARSIR 343 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~-----~~~~~~~~~~~ 343 (591)
|+.+...+++.+.+| .||.+.+...... .+.+ +++...... .+.|.. ....+. +|.......+.
T Consensus 85 G~s~~Y~f~~~~~~G-T~WYHsH~~~~~~----Gl~G-~lIV~~~~~----~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~ 153 (539)
T TIGR03389 85 GQSYVYNFTITGQRG-TLWWHAHISWLRA----TVYG-AIVILPKPG----VPYPFP-KPDREVPIILGEWWNADVEAVI 153 (539)
T ss_pred CCeEEEEEEecCCCe-eEEEecCchhhhc----cceE-EEEEcCCCC----CCCCCC-CCCceEEEEecccccCCHHHHH
Confidence 999999999865688 9999998642111 1222 233322111 111110 000000 11100000000
Q ss_pred cccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 344 WNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 344 ~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
... +.... ...-...+.|||+...... + . +
T Consensus 154 ~~~-------------------------~~~~~--~~~~~d~~liNG~~~~~~~---------------~-~----~--- 183 (539)
T TIGR03389 154 NQA-------------------------NQTGG--APNVSDAYTINGHPGPLYN---------------C-S----S--- 183 (539)
T ss_pred HHH-------------------------HhcCC--CCCccceEEECCCcCCCCC---------------C-C----C---
Confidence 000 00000 0000113667776421000 0 0 0
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILV 502 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf 502 (591)
....+++++.|+++.+.|.|.+. ..+.|||+||.|+||+.++. + ..|...|++.|.+|+.+.|.+
T Consensus 184 ---~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~-~----------~~P~~~~~l~i~~GqRydVlv 249 (539)
T TIGR03389 184 ---KDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDAT-Y----------TKPFKTKTIVIGPGQTTNVLL 249 (539)
T ss_pred ---CCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCc-c----------cCceEeCeEEecCCCEEEEEE
Confidence 01246788899999999999874 46899999999999999743 1 247778999999999999999
Q ss_pred EeCC-ccceeeeccc
Q 007735 503 SLDN-VGIWNLRTEN 516 (591)
Q Consensus 503 ~adN-pG~W~~HCHi 516 (591)
.+++ +|.|.++-+.
T Consensus 250 ~a~~~~g~y~i~~~~ 264 (539)
T TIGR03389 250 TADQSPGRYFMAARP 264 (539)
T ss_pred ECCCCCceEEEEEec
Confidence 9986 8999887654
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.6e-08 Score=108.60 Aligned_cols=218 Identities=14% Similarity=0.156 Sum_probs=134.0
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|++++|+++++++.|.-.. ...+|.||..+.- -..||.+. ..-.|.|
T Consensus 49 ~~~~~NG~~P-------------GP~I~~~~GD~v~v~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~~-----tQ~pI~P 109 (539)
T PLN02835 49 QVILINGQFP-------------GPRLDVVTNDNIILNLINKLDQ-PFLLTWNGIKQRKNSWQDGVLG-----TNCPIPP 109 (539)
T ss_pred EEEEECCcCC-------------CCCEEEECCCEEEEEEEeCCCC-CCcEEeCCcccCCCCCCCCCcc-----CcCCCCC
Confidence 4799999975 4999999999999999998654 4556666654432 24699653 1347999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc-------cccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT-------FSMNQARS 341 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-------~~~~~~~~ 341 (591)
|+.+...+++.+.+| .||.+++...-.. ..+.+.-|++ .... .+.|. +. ++.+ |.......
T Consensus 110 G~sf~Y~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G~lIV~-~~~~----~~~p~-~~--~d~e~~l~l~Dw~~~~~~~ 177 (539)
T PLN02835 110 NSNYTYKFQTKDQIG-TFTYFPSTLFHKA---AGGFGAINVY-ERPR----IPIPF-PL--PDGDFTLLVGDWYKTSHKT 177 (539)
T ss_pred CCcEEEEEEECCCCE-eEEEEeCccchhc---CcccceeEEe-CCCC----CCcCC-CC--CCceEEEEeeccccCCHHH
Confidence 999999998765678 9999987532100 1122222332 2111 11110 00 0111 11000000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCC
Q 007735 342 IRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPV 421 (591)
Q Consensus 342 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~ 421 (591)
+...+..+. ... . .....|||+..
T Consensus 178 ~~~~~~~g~------------------------~~~-~---~d~~liNG~~~---------------------------- 201 (539)
T PLN02835 178 LQQRLDSGK------------------------VLP-F---PDGVLINGQTQ---------------------------- 201 (539)
T ss_pred HHHHhhcCC------------------------CCC-C---CceEEEccccC----------------------------
Confidence 000000000 000 0 01244555421
Q ss_pred CCCCCcceEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 422 TGPPRMETSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 422 ~~~~~~~~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
..+.++.|+++.|.|.|.+.. ..-||+.||+|.||+.++... .|...|++.+.+|+...+
T Consensus 202 --------~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v-----------~p~~~~~l~i~~GqRydv 262 (539)
T PLN02835 202 --------STFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHT-----------IQNIYDSLDVHVGQSVAV 262 (539)
T ss_pred --------ceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccC-----------CCceeeEEEECcCceEEE
Confidence 124567899999999998754 799999999999999975322 255689999999999999
Q ss_pred EEEeCC-ccceeee
Q 007735 501 LVSLDN-VGIWNLR 513 (591)
Q Consensus 501 rf~adN-pG~W~~H 513 (591)
.++++. +|.|-++
T Consensus 263 lv~~~~~~g~y~i~ 276 (539)
T PLN02835 263 LVTLNQSPKDYYIV 276 (539)
T ss_pred EEEcCCCCCcEEEE
Confidence 999875 6877766
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.1e-08 Score=105.62 Aligned_cols=228 Identities=14% Similarity=0.130 Sum_probs=138.6
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|+++.|+++++++.|.-.. ...+|.||..+.- -..||.+. ..-.|.|
T Consensus 47 ~~~~iNGq~P-------------GP~I~~~~GD~v~V~v~N~l~~-~ttiHWHGi~q~~~~~~DGv~~-----TQcpI~P 107 (552)
T PLN02354 47 QVILINGQFP-------------GPNINSTSNNNIVINVFNNLDE-PFLLTWSGIQQRKNSWQDGVPG-----TNCPIPP 107 (552)
T ss_pred EEEEECCCCc-------------CCcEEEeCCCEEEEEEEECCCC-CcccccccccCCCCcccCCCcC-----CcCCCCC
Confidence 4899999975 4999999999999999998643 4456666654332 24799652 2347999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCC-CCCCCcCc-----cccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPE-GPNDEFDK-----TFSMNQARSI 342 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~-~p~~~~~~-----~~~~~~~~~~ 342 (591)
|+.+...+++++.+| .||.+++...-.. ..+.+ +++-..... .+.|- .+.. +. +|.......+
T Consensus 108 G~sf~Y~F~~~~q~G-T~WYHsH~~~Q~~---~Gl~G-~lII~~~~~----~~~p~~~~d~--e~~l~l~Dw~~~~~~~~ 176 (552)
T PLN02354 108 GTNFTYHFQPKDQIG-SYFYYPSTGMHRA---AGGFG-GLRVNSRLL----IPVPYADPED--DYTVLIGDWYTKSHTAL 176 (552)
T ss_pred CCcEEEEEEeCCCCc-ceEEecCccceec---CCccc-eEEEcCCcC----CCCCCCCcCc--eEEEEeeeeccCCHHHH
Confidence 999999999865678 9999987532110 01222 233222110 11110 0000 10 1111000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCC
Q 007735 343 RWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVT 422 (591)
Q Consensus 343 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 422 (591)
...+... . .........|||+.... +
T Consensus 177 ~~~~~~g------------------------~----~~~~~d~~liNG~~~~~----------------~---------- 202 (552)
T PLN02354 177 KKFLDSG------------------------R----TLGRPDGVLINGKSGKG----------------D---------- 202 (552)
T ss_pred HHHHhcC------------------------C----CCCCCCeEEEeCCcCCC----------------C----------
Confidence 0000000 0 00001235667653110 0
Q ss_pred CCCCcceEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEE
Q 007735 423 GPPRMETSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501 (591)
Q Consensus 423 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~ir 501 (591)
......++++.|+++.|.|.|.+.. ..-||+.||+|.||+.++... .|...|++.|.+|+...+.
T Consensus 203 ---~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v-----------~p~~~~~l~i~~GqRydVl 268 (552)
T PLN02354 203 ---GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHV-----------LQNDYDSLDVHVGQCFSVL 268 (552)
T ss_pred ---CCCceEEEECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCccc-----------CCcceeEEEEccCceEEEE
Confidence 0023457788999999999998754 789999999999999975322 2455799999999999999
Q ss_pred EEeCC-ccceeeecc
Q 007735 502 VSLDN-VGIWNLRTE 515 (591)
Q Consensus 502 f~adN-pG~W~~HCH 515 (591)
+++++ +|.|-++-.
T Consensus 269 v~a~~~~g~Y~i~a~ 283 (552)
T PLN02354 269 VTANQAPKDYYMVAS 283 (552)
T ss_pred EECCCCCCcEEEEEe
Confidence 99985 798877765
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=104.30 Aligned_cols=222 Identities=16% Similarity=0.215 Sum_probs=134.0
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe---ecCCceeeeeeeEEEE
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE---TEGSYTVQQNYTSLDI 266 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via---~DG~~~~p~~~d~v~i 266 (591)
..++|||+.. .|+|++++|+++++++.|--.. ...+|.|| +.+.. .||.+. ..-.|
T Consensus 36 ~~~~vNGq~P-------------GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHG--l~q~~~~~~DGv~~-----tqcPI 94 (536)
T PLN02792 36 RGILINGQFP-------------GPEIRSLTNDNLVINVHNDLDE-PFLLSWNG--VHMRKNSYQDGVYG-----TTCPI 94 (536)
T ss_pred EEEEECCCCC-------------CCcEEEECCCEEEEEEEeCCCC-CcCEeCCC--cccCCCCccCCCCC-----CcCcc
Confidence 4799999975 4999999999999999998653 34444444 44443 799643 12579
Q ss_pred ccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCc-----ccccccccc
Q 007735 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK-----TFSMNQARS 341 (591)
Q Consensus 267 ~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~-----~~~~~~~~~ 341 (591)
.||+.+...+++++.+| .||.+++...... ..+.+ +++-+.....+ .+++. +.. +. +|.......
T Consensus 95 ~PG~sftY~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G-~liI~~~~~~~--~p~~~-~d~--e~~i~l~Dw~~~~~~~ 164 (536)
T PLN02792 95 PPGKNYTYDFQVKDQVG-SYFYFPSLAVQKA---AGGYG-SLRIYSLPRIP--VPFPE-PAG--DFTFLIGDWYRRNHTT 164 (536)
T ss_pred CCCCcEEEEEEeCCCcc-ceEEecCcchhhh---ccccc-ceEEeCCcccC--cCCCc-ccc--eeEEEecccccCCHHH
Confidence 99999999999865688 9999998642110 01222 23233211100 11110 000 10 111000000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCC
Q 007735 342 IRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPV 421 (591)
Q Consensus 342 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~ 421 (591)
+...+.. ... ...-.....|||+...
T Consensus 165 ~~~~~~~------------------------g~~---~~~~~d~~liNG~~~~--------------------------- 190 (536)
T PLN02792 165 LKKILDG------------------------GRK---LPLMPDGVMINGQGVS--------------------------- 190 (536)
T ss_pred HHHHhhc------------------------cCc---CCCCCCEEEEeccCCC---------------------------
Confidence 0000000 000 0000113556654210
Q ss_pred CCCCCcceEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 422 TGPPRMETSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 422 ~~~~~~~~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
....+.++.|+++.|.|.|.+.. ..-|++.||+|.||+.++... .|...|++.|.+|+.+.+
T Consensus 191 ------~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v-----------~p~~~~~l~i~~GqRydV 253 (536)
T PLN02792 191 ------YVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHT-----------VQSMYTSLDIHVGQTYSV 253 (536)
T ss_pred ------CcceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccC-----------CCcceeEEEEccCceEEE
Confidence 01346678899999999998755 689999999999999975422 355679999999999999
Q ss_pred EEEeCC-ccceeee
Q 007735 501 LVSLDN-VGIWNLR 513 (591)
Q Consensus 501 rf~adN-pG~W~~H 513 (591)
.++++. +|.|-+.
T Consensus 254 lV~a~~~~g~Y~i~ 267 (536)
T PLN02792 254 LVTMDQPPQNYSIV 267 (536)
T ss_pred EEEcCCCCceEEEE
Confidence 999976 5776665
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-07 Score=104.55 Aligned_cols=219 Identities=17% Similarity=0.189 Sum_probs=133.8
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeE-EEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLL-LAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~-via~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. -|.|+++.|+++++++.|.-.. ...+|.||..+. --..||.+. ..-.|.|
T Consensus 48 ~~~~vNG~~P-------------GP~I~~~~GD~v~V~V~N~L~~-~ttiHWHGi~q~~~~~~DGv~~-----tQcpI~P 108 (543)
T PLN02991 48 QGILINGKFP-------------GPDIISVTNDNLIINVFNHLDE-PFLISWSGIRNWRNSYQDGVYG-----TTCPIPP 108 (543)
T ss_pred EEEEEcCCCC-------------CCcEEEECCCEEEEEecCCCCC-CccEEECCcccCCCccccCCCC-----CCCccCC
Confidence 4799999975 4999999999999999998643 455666665532 134799642 2347999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCC-CCCCcCc-----cccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEG-PNDEFDK-----TFSMNQARSI 342 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~-p~~~~~~-----~~~~~~~~~~ 342 (591)
|+++...+++++.+| +||.+++...... ..+.+ +++-..... .+.|.. +.. +. +|.......+
T Consensus 109 G~sftY~F~~~~q~G-T~WYHsH~~~q~~---~Gl~G-~lIV~~~~~----~~~p~~~~d~--d~~i~l~DW~~~~~~~~ 177 (543)
T PLN02991 109 GKNYTYALQVKDQIG-SFYYFPSLGFHKA---AGGFG-AIRISSRPL----IPVPFPAPAD--DYTVLIGDWYKTNHKDL 177 (543)
T ss_pred CCcEEEEEEeCCCCc-ceEEecCcchhhh---CCCee-eEEEeCCcc----cCcccccccc--eeEEEecceecCCHHHH
Confidence 999999999965688 9999998642110 11222 333322111 111110 000 10 1111000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCC
Q 007735 343 RWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVT 422 (591)
Q Consensus 343 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 422 (591)
...+.. .. ...-.....|||+..
T Consensus 178 ~~~~~~------------------------~~----~~~~~d~~liNG~~~----------------------------- 200 (543)
T PLN02991 178 RAQLDN------------------------GG----KLPLPDGILINGRGS----------------------------- 200 (543)
T ss_pred HHHhhc------------------------CC----CCCCCCEEEEccCCC-----------------------------
Confidence 000000 00 000001244555421
Q ss_pred CCCCcceEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEE
Q 007735 423 GPPRMETSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501 (591)
Q Consensus 423 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~ir 501 (591)
...++++.|+++.+.|.|.+.. .+-|+|.||+|+||+.++.. ..|...|++.|.+|+...+.
T Consensus 201 ------~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~-----------~~p~~~~~l~i~~GQRydvl 263 (543)
T PLN02991 201 ------GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTH-----------TIQTPFSSLDVHVGQSYSVL 263 (543)
T ss_pred ------CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCcc-----------ccceeeeEEEEcCCcEEEEE
Confidence 1235677899999999998765 68999999999999996432 23667899999999999999
Q ss_pred EEeCCc-cceee
Q 007735 502 VSLDNV-GIWNL 512 (591)
Q Consensus 502 f~adNp-G~W~~ 512 (591)
+.+|++ |.+-+
T Consensus 264 v~a~~~~~~y~i 275 (543)
T PLN02991 264 ITADQPAKDYYI 275 (543)
T ss_pred EECCCCCCcEEE
Confidence 999874 64433
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-07 Score=102.11 Aligned_cols=220 Identities=13% Similarity=0.169 Sum_probs=129.9
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE-eecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA-ETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|+++.|+++++++.|--.. ...+|.||..+.-- ..||.+- ..-.|.|
T Consensus 46 ~~~~vNG~~P-------------GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~g-----tQcpI~P 106 (545)
T PLN02168 46 QVIVINDMFP-------------GPLLNATANDVINVNIFNNLTE-PFLMTWNGLQLRKNSWQDGVRG-----TNCPILP 106 (545)
T ss_pred EEEEECCcCC-------------CCcEEEECCCEEEEEEEeCCCC-CccEeeCCccCCCCCCcCCCCC-----CcCCCCC
Confidence 4789999975 4999999999999999998754 45666666543221 2599653 2247999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|+++...+++++.+| .||.+.+...-.. ..+.+ +++-..... ...+.+ .+.. +....+.+ |....
T Consensus 107 G~sftY~F~~~~q~G-T~WYHsH~~~Q~~---~GL~G-~lII~~~~~--~~~p~~-~~d~--e~~l~l~D-----w~~~~ 171 (545)
T PLN02168 107 GTNWTYRFQVKDQIG-SYFYFPSLLLQKA---AGGYG-AIRIYNPEL--VPVPFP-KPDE--EYDILIGD-----WFYAD 171 (545)
T ss_pred CCcEEEEEEeCCCCc-eEEEecChhhhhh---Cccee-EEEEcCCcc--cCcCcC-cccc--eeeEEEEe-----cCCCC
Confidence 999999999965688 9999987542110 11222 233322111 001111 0100 10000000 00000
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
. . ..... +.... .........|||+.- .
T Consensus 172 ~------~--------~~~~~--~~~g~--~~~~~d~~liNG~~~----------------------------------~ 199 (545)
T PLN02168 172 H------T--------VMRAS--LDNGH--SLPNPDGILFNGRGP----------------------------------E 199 (545)
T ss_pred H------H--------HHHhh--hhcCC--CCCCCCEEEEeccCC----------------------------------C
Confidence 0 0 00000 00000 000001245555420 0
Q ss_pred eEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 429 TSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
...++++.|+++.|.|.|.+.. .+.|++.||+|+|++.++.. .+|...|++.+.+|+...+.+++++
T Consensus 200 ~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~-----------v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 200 ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTY-----------VQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred cceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeE-----------CCCceeeEEEEcCCceEEEEEEcCC
Confidence 1245677899999999998754 68999999999999987532 2356679999999999999999974
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-07 Score=103.25 Aligned_cols=232 Identities=14% Similarity=0.055 Sum_probs=143.8
Q ss_pred CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECC-CCCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEEEEE
Q 007735 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQ 116 (591)
Q Consensus 43 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~ 116 (591)
|.......+||+. -| +.+.++..+++|+.|.- .....+++.|..+.. -..||.+. .+..+.|||+++...+
T Consensus 186 ~~~g~~~~vnG~~-~p-~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~V-i~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 186 GFPGDTLLVNGAI-LP-FKAVPGGVVRLRLLNAGNARTYHLALGGGPLTV-IAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred CCCCCeEEECCCc-cc-eeecCCCeEEEEEEecCCceEEEEEecCceEEE-EEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 4556677888853 34 45555666999999997 455666666555432 35677652 4567999999999999
Q ss_pred eCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecc-cccCchHHHHHHh-hcC----C-----C
Q 007735 117 VKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGD-WYTRNHTALRKTL-DAG----K-----G 185 (591)
Q Consensus 117 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d-~~~~~~~~~~~~~-~~~----~-----~ 185 (591)
.+ ..|++=+.|.. .+..+-+.+..-....... ++...+.+......| +...........+ +.+ . .
T Consensus 263 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 338 (451)
T COG2132 263 MN-DGGAVTLTALG-EDMPDTLKGFRAPNPILTP--SYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLIG 338 (451)
T ss_pred cC-CCCeEEEEecc-ccCCceeeeeecccccccc--ccccccccccCCCcchhhccccccchhhcCCCcccccccchhhc
Confidence 85 47888888876 2222223333222211110 110111111111111 0000000000000 011 0 0
Q ss_pred CCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce--eeeeeeE
Q 007735 186 LGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT--VQQNYTS 263 (591)
Q Consensus 186 ~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~--~p~~~d~ 263 (591)
.-....+.+||+.+. .+...+.++.|+++||++.|-+. -.|.||+||+.|+|++.|...- .+...|+
T Consensus 339 ~~~~~~~~~n~~~~~----------~~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~~~~~~~~~~~kDT 407 (451)
T COG2132 339 GIGGYVWAINGKAFD----------DNRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGDAPAPGAAPGWKDT 407 (451)
T ss_pred ccccccccccCccCC----------CCcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecCCCcccccCccceE
Confidence 012346889998872 12578899999999999999987 5899999999999999992211 2467899
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+.+.+++|+.+.++++ .+| .|.++++...
T Consensus 408 v~v~~~~~~~v~~~a~-~~g-~~~~HCH~l~ 436 (451)
T COG2132 408 VLVAPGERLLVRFDAD-YPG-PWMFHCHILE 436 (451)
T ss_pred EEeCCCeEEEEEEeCC-CCC-ceEEeccchh
Confidence 9999999999999999 456 8989887643
|
|
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.5e-09 Score=94.16 Aligned_cols=89 Identities=18% Similarity=0.281 Sum_probs=73.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCC-------------CC--CCCccCCCCcEEEEEEeCCce
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL-------------LG--TNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv-------------~~--tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
.+.++++.|+.+++.+.|.......+|+||..+......++. ++ .-..|+||+..+.+|++ +.+
T Consensus 33 ~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~-~~~ 111 (138)
T PF07731_consen 33 TPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA-DNP 111 (138)
T ss_dssp TSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE-TST
T ss_pred cceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe-ecc
Confidence 578999999999999999999999999999977422111111 11 12458999999999999 689
Q ss_pred eeeEEecChhhhhhcCceeeEEEec
Q 007735 122 GSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 122 Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
|.|.||||...+...||.+.+.|.+
T Consensus 112 G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 112 GPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp EEEEEEESSHHHHHTT-EEEEEECH
T ss_pred eEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999976
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.3e-07 Score=100.55 Aligned_cols=233 Identities=13% Similarity=0.132 Sum_probs=137.0
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE-eecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA-ETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi-a~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. -|+|+++.|+++++++.|--.. ...+|.||..+.-- ..||... ..-.|.|
T Consensus 49 ~vi~vNGq~P-------------GPtI~~~~GD~v~V~V~N~L~~-~ttIHWHGl~q~~t~w~DGv~~-----TQcPI~P 109 (596)
T PLN00044 49 EAIGINGQFP-------------GPALNVTTNWNLVVNVRNALDE-PLLLTWHGVQQRKSAWQDGVGG-----TNCAIPA 109 (596)
T ss_pred EEEEEcCcCC-------------CCcEEEECCCEEEEEEEeCCCC-CccEEECCccCCCCccccCCCC-----CcCCcCC
Confidence 4799999975 4999999999999999998654 56677777654432 4799642 3358999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCc-----ccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK-----TFSMNQARSIR 343 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~-----~~~~~~~~~~~ 343 (591)
|+++...+++++.+| .||.+++...-.. ..+. .+++-+..... ..|.+. +.. .+. +|...+...+.
T Consensus 110 G~sftY~F~~~dq~G-T~WYHsH~~~Q~~---~Gl~-GalII~~~~~~--~~P~~~-~~~-~e~~i~l~DW~~~~~~~~~ 180 (596)
T PLN00044 110 GWNWTYQFQVKDQVG-SFFYAPSTALHRA---AGGY-GAITINNRDVI--PIPFGF-PDG-GDITLFIADWYARDHRALR 180 (596)
T ss_pred CCcEEEEEEeCCCCc-eeEeeccchhhhh---CcCe-eEEEEcCcccc--cccccC-Ccc-cceEEEecccccCCHHHHH
Confidence 999999999965688 9999997642111 0122 23333321110 011110 000 011 11111100000
Q ss_pred cccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 344 WNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 344 ~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
..+..+...+ .. ....|||..-...+ +.. . + +
T Consensus 181 ~~l~~g~~~~-------------------------~~---d~~lING~g~~~~n------------~~~---~---~-~- 212 (596)
T PLN00044 181 RALDAGDLLG-------------------------AP---DGVLINAFGPYQYN------------DSL---V---P-P- 212 (596)
T ss_pred HHHhcCCCCC-------------------------CC---CceEEcccCccccC------------Ccc---c---c-C-
Confidence 0000000000 00 01234443110000 000 0 0 0
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILV 502 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf 502 (591)
.....++.++.|+++.|.|.|.+. ...-|+|.||+|.||+.++. + .+|..-|++.|.+|+...+.+
T Consensus 213 --~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~DG~-~----------v~P~~vd~i~I~~GQRydVLV 279 (596)
T PLN00044 213 --GITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGS-Y----------TSQQNYTNLDIHVGQSYSFLL 279 (596)
T ss_pred --CCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeCCc-c----------cCceeeeeEEEcCCceEEEEE
Confidence 001236788999999999999874 46789999999999999742 2 247778999999999999999
Q ss_pred EeCCc-c--cee
Q 007735 503 SLDNV-G--IWN 511 (591)
Q Consensus 503 ~adNp-G--~W~ 511 (591)
++|.+ | -|+
T Consensus 280 ~a~q~~~~~Y~i 291 (596)
T PLN00044 280 TMDQNASTDYYV 291 (596)
T ss_pred ECCCCCCCceEE
Confidence 99875 5 365
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.2e-07 Score=99.25 Aligned_cols=236 Identities=14% Similarity=0.137 Sum_probs=142.2
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|+++.|+++++++.|.-......+|.||..+.- -..||.+.. ..-.|.|
T Consensus 28 ~~~~~NG~~P-------------GP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~v----TQcpI~P 90 (538)
T TIGR03390 28 YSVVVNGTSP-------------GPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLA----SQWPIPP 90 (538)
T ss_pred EEEEECCcCC-------------CCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCccc----ccCCCCC
Confidence 4899999975 499999999999999999754345567777765432 247997742 2235889
Q ss_pred ccEEEEEEEeC-CCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc-------ccccccc
Q 007735 269 GQSYSFLVTMD-QNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT-------FSMNQAR 340 (591)
Q Consensus 269 GqR~dvlv~~~-~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-------~~~~~~~ 340 (591)
|+.+...++++ +.+| .||.+.+... +. .. ..+.|...... ..+. . +|.+ |......
T Consensus 91 G~sf~Y~f~~~~~q~G-T~WYHsH~~~--Q~--~~--l~G~lIV~~~~---~~~~----~--~d~e~~l~l~Dw~~~~~~ 154 (538)
T TIGR03390 91 GHFFDYEIKPEPGDAG-SYFYHSHVGF--QA--VT--AFGPLIVEDCE---PPPY----K--YDDERILLVSDFFSATDE 154 (538)
T ss_pred CCcEEEEEEecCCCCe-eeEEecCCch--hh--hc--ceeEEEEccCC---ccCC----C--ccCcEEEEEeCCCCCCHH
Confidence 99999999875 3678 9999988632 21 11 33333333221 0011 0 1111 1111000
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 420 (591)
.+...+. ..... .........|||+......... ..+
T Consensus 155 ~~~~~~~-------------------------~~~~~-~~~~~d~~liNG~~~~~~~~~~-------~~~---------- 191 (538)
T TIGR03390 155 EIEQGLL-------------------------STPFT-WSGETEAVLLNGKSGNKSFYAQ-------INP---------- 191 (538)
T ss_pred HHHhhhh-------------------------ccCCc-cCCCCceEEECCcccccccccc-------ccC----------
Confidence 0000000 00000 0001124667776321100000 000
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEecCCCc-ceeeeecCce-EEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEE
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQNNDTK-MHAYHMSGYA-FFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~-F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~ 498 (591)
...| ....+.++.|+++.|.|.|.+.. ..-|+|.||. |+||+.++. +..|...|++.|.+|+..
T Consensus 192 --~~~~-~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRy 257 (538)
T TIGR03390 192 --SGSC-MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRY 257 (538)
T ss_pred --CCCC-cceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEE
Confidence 0011 13567889999999999998765 6899999999 999999753 235778899999999999
Q ss_pred EEEEEeCCc--------cceeeecc
Q 007735 499 AILVSLDNV--------GIWNLRTE 515 (591)
Q Consensus 499 ~irf~adNp--------G~W~~HCH 515 (591)
.|.++++++ |.|.++--
T Consensus 258 dVlv~~~~~~~~~~~~~~~Y~ir~~ 282 (538)
T TIGR03390 258 SVLFKAKTEDELCGGDKRQYFIQFE 282 (538)
T ss_pred EEEEECCCccccccCCCCcEEEEEe
Confidence 999999864 77766643
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.2e-07 Score=81.71 Aligned_cols=74 Identities=18% Similarity=0.328 Sum_probs=54.6
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+| +++|.-..++++.+.|. ++...+...+.||++++|.|+. +|+|-|+|- .+...
T Consensus 46 P~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~--------~~~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~--~H~~~ 110 (119)
T PRK02710 46 PSTLTIKAGDTV--KWVNNKLAPHNAVFDGA--------KELSHKDLAFAPGESWEETFSE---AGTYTYYCE--PHRGA 110 (119)
T ss_pred CCEEEEcCCCEE--EEEECCCCCceEEecCC--------ccccccccccCCCCEEEEEecC---CEEEEEEcC--CCccC
Confidence 478999999985 55677556777765542 1111123458999999998874 899999998 56668
Q ss_pred CceeeEEEe
Q 007735 137 GGFGGFIIN 145 (591)
Q Consensus 137 Gl~G~liV~ 145 (591)
||.|.|+|+
T Consensus 111 gM~G~I~V~ 119 (119)
T PRK02710 111 GMVGKITVE 119 (119)
T ss_pred CcEEEEEEC
Confidence 999999984
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.7e-06 Score=94.46 Aligned_cols=256 Identities=14% Similarity=0.217 Sum_probs=139.3
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|++++|+++++++.|........+|.||+...- -..||..- +..-.|.|
T Consensus 21 ~~~~~Ng~~p-------------GP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~----vtq~~I~P 83 (541)
T TIGR03388 21 LVIGINGQFP-------------GPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAG----VTQCAINP 83 (541)
T ss_pred eEEEECCcCC-------------CCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCc----cccCCcCC
Confidence 4799999975 499999999999999999865446788888875321 12588642 23457899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|+++...+++++ +| .||.+.+...-.. ..+.+ +++... ... ...+.. +|.+..+ ...+ |....
T Consensus 84 G~s~~y~f~~~~-~G-t~wyH~H~~~q~~---~Gl~G-~liV~~-~~~-~~~p~~------~d~e~~l-~l~D--w~~~~ 146 (541)
T TIGR03388 84 GETFIYNFVVDR-PG-TYFYHGHYGMQRS---AGLYG-SLIVDV-PDG-EKEPFH------YDGEFNL-LLSD--WWHKS 146 (541)
T ss_pred CCEEEEEEEcCC-CE-EEEEEecchHHhh---ccceE-EEEEec-CCC-CCCCcc------ccceEEE-Eeec--ccCCC
Confidence 999999999974 78 9999987532110 11222 233222 110 001111 1111100 0000 00000
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
. . +... .+...............|||+-...-......... ..+.+. ..+.....
T Consensus 147 ~------~--------~~~~--~~~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~ 201 (541)
T TIGR03388 147 I------H--------EQEV--GLSSKPMRWIGEPQSLLINGRGQFNCSLAAKFSST--NLPQCN-------LKGNEQCA 201 (541)
T ss_pred H------H--------HHHh--hcccCCCcCCCCCcceEECCCCCCCCccccccCcc--ccchhh-------ccCCCCCC
Confidence 0 0 0000 00000000000011235565421100000000000 000000 00000011
Q ss_pred eEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC-
Q 007735 429 TSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN- 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN- 506 (591)
..++.++.|+++.|.|.|.+. ..+-|+++||+|+||+.+++. ..|..-|.+.|.+|+.+.+.++++.
T Consensus 202 ~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VIa~DG~~-----------v~P~~v~~l~i~~GqR~dvlv~~~~~ 270 (541)
T TIGR03388 202 PQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEADGNY-----------VEPFTVKDIDIYSGETYSVLLTTDQD 270 (541)
T ss_pred ceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEEEeCCEe-----------cccceeCeEEecCCCEEEEEEeCCCC
Confidence 235788899999999999874 589999999999999997542 2467789999999999999999975
Q ss_pred cc-ceeeecc
Q 007735 507 VG-IWNLRTE 515 (591)
Q Consensus 507 pG-~W~~HCH 515 (591)
|| .|-++--
T Consensus 271 ~~~~y~ira~ 280 (541)
T TIGR03388 271 PSRNYWISVG 280 (541)
T ss_pred CCCcEEEEEe
Confidence 44 5666643
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.9e-08 Score=108.57 Aligned_cols=89 Identities=22% Similarity=0.209 Sum_probs=69.9
Q ss_pred EeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 432 INGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
+.++.|+++++.+.|.. ...|++|+||... .+. .|... ........|+||+...++|+++++|.|
T Consensus 57 i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~--~~~---~~~DG---------~~~~tq~~i~pg~s~~y~f~~~~~Gt~ 122 (566)
T PLN02604 57 ILAQQGDTVIVELKNSLLTENVAIHWHGIRQ--IGT---PWFDG---------TEGVTQCPILPGETFTYEFVVDRPGTY 122 (566)
T ss_pred EEEECCCEEEEEEEeCCCCCCCCEEeCCCCC--CCC---ccccC---------CCccccCccCCCCeEEEEEEcCCCEEE
Confidence 56778999999999985 5789999999942 110 11110 111234578999999999999999999
Q ss_pred eeecccccchhccceEEEEEecCC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.||||...|...||...+.|..++
T Consensus 123 wyH~H~~~q~~~Gl~G~liV~~~~ 146 (566)
T PLN02604 123 LYHAHYGMQREAGLYGSIRVSLPR 146 (566)
T ss_pred EEeeCcHHHHhCCCeEEEEEEecC
Confidence 999999999999999999998764
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.1e-06 Score=94.21 Aligned_cols=248 Identities=15% Similarity=0.170 Sum_probs=137.3
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+.. .|+|+++.|+++++++.|.-......+|.||....- -..||.+- +..-.|.|
T Consensus 43 ~v~~vNg~~p-------------GP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~g----vtq~pI~P 105 (574)
T PLN02191 43 AVMTVNGQFP-------------GPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAG----VTQCAINP 105 (574)
T ss_pred eEEEECCcCC-------------CCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCc----cccCCcCC
Confidence 5899999975 499999999999999999855445677777765421 12587653 22346999
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc-------cccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT-------FSMNQARS 341 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-------~~~~~~~~ 341 (591)
|+.+...++++ .+| .||.+.+...-.. ..+.+ +++.. ....+. .+. . +|.+ |.......
T Consensus 106 G~s~~Y~f~~~-~~G-T~wYHsH~~~q~~---~Gl~G-~liV~-~~~~~~-~~~--~----~d~e~~l~l~Dw~~~~~~~ 171 (574)
T PLN02191 106 GETFTYKFTVE-KPG-THFYHGHYGMQRS---AGLYG-SLIVD-VAKGPK-ERL--R----YDGEFNLLLSDWWHESIPS 171 (574)
T ss_pred CCeEEEEEECC-CCe-EEEEeeCcHHHHh---CCCEE-EEEEc-cCCCCC-CCC--C----CCeeEEEeeeccccCChHH
Confidence 99999999997 478 9999988632110 11222 22322 211110 011 0 1111 11100000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCC
Q 007735 342 IRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPV 421 (591)
Q Consensus 342 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~ 421 (591)
....+.. .+.. .........|||+.-...+....... ...+..+ ....
T Consensus 172 ~~~~~~~---~~~~-----------------------~~~~~d~~liNG~g~~~~~~~~~~~~--~~~~~~~----~~~~ 219 (574)
T PLN02191 172 QELGLSS---KPMR-----------------------WIGEAQSILINGRGQFNCSLAAQFSN--GTELPMC----TFKE 219 (574)
T ss_pred HHHhhcc---CCCC-----------------------cCCCCCceEECCCCCCCCcccccccC--Ccccccc----eecc
Confidence 0000000 0000 00001123455432110000000000 0000000 0000
Q ss_pred CCCCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 422 TGPPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 422 ~~~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
+ +.+ ...+++++.|+++.|.|.|.+. ..+-|++.||+|.||+.++.. ..|...|++.|.+|+...+
T Consensus 220 n-~~~-~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~-----------v~P~~v~~l~i~~GqRydV 286 (574)
T PLN02191 220 G-DQC-APQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGNY-----------ITPFTTDDIDIYSGESYSV 286 (574)
T ss_pred C-CCC-CceEEEEcCCCEEEEEEEecCCceeEEEEECCCeEEEEEcCCee-----------ccceEeeeEEEcCCCeEEE
Confidence 0 001 1236889999999999999875 478999999999999997432 2477889999999999999
Q ss_pred EEEeCC-cc-ceeee
Q 007735 501 LVSLDN-VG-IWNLR 513 (591)
Q Consensus 501 rf~adN-pG-~W~~H 513 (591)
.++++. +| .+-++
T Consensus 287 lV~a~~~~~~~y~ir 301 (574)
T PLN02191 287 LLTTDQDPSQNYYIS 301 (574)
T ss_pred EEECCCCCCCCEEEE
Confidence 999986 44 44444
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.1e-07 Score=81.53 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=67.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC-cc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN-VG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN-pG 508 (591)
+++.++.|+.|++.+.|.....+.+|.||... ....|.+..+ ... .-.|.||+....+|.++. +|
T Consensus 26 PtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~-----~~~~~~DG~~--~~~-------~~~i~pG~~~~Y~~~~~~~~G 91 (117)
T PF07732_consen 26 PTIRVREGDTVRITVTNNLDEPTSIHWHGLHQ-----PPSPWMDGVP--GVT-------QCPIAPGESFTYEFTANQQAG 91 (117)
T ss_dssp EEEEEETTEEEEEEEEEESSSGBSEEEETSBS-----TTGGGGSGGT--TTS-------GSSBSTTEEEEEEEEESSCSE
T ss_pred CEEEEEcCCeeEEEEEeccccccccccceeee-----eeeeecCCcc--ccc-------ceeEEeecceeeeEeeecccc
Confidence 45778899999999999988899999999763 1111111100 000 114788999999999988 99
Q ss_pred ceeeecccccchhccceEEEEEecC
Q 007735 509 IWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.|.||||...+...||...+.|.++
T Consensus 92 t~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 92 TYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred ceeEeeCCCchhcCcCEEEEEEcCC
Confidence 9999999988767999999988765
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-06 Score=75.08 Aligned_cols=74 Identities=19% Similarity=0.250 Sum_probs=46.8
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
+|-...|+++.|+.|+|+++|.-...+.+...++.. ...|.||++.++.|+. +++|+|=|+|..+.
T Consensus 31 ~f~P~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~------------~~~l~~g~~~~~~f~~-~~~G~y~~~C~~~~- 96 (104)
T PF13473_consen 31 GFSPSTITVKAGQPVTLTFTNNDSRPHEFVIPDLGI------------SKVLPPGETATVTFTP-LKPGEYEFYCTMHP- 96 (104)
T ss_dssp EEES-EEEEETTCEEEEEEEE-SSS-EEEEEGGGTE------------EEEE-TT-EEEEEEEE--S-EEEEEB-SSS--
T ss_pred eEecCEEEEcCCCeEEEEEEECCCCcEEEEECCCce------------EEEECCCCEEEEEEcC-CCCEEEEEEcCCCC-
Confidence 443458999999999999999977766665555322 1468999999999986 68999999999765
Q ss_pred hhcCceeeEEE
Q 007735 134 RASGGFGGFII 144 (591)
Q Consensus 134 ~~~Gl~G~liV 144 (591)
. |.|-|+|
T Consensus 97 --~-m~G~liV 104 (104)
T PF13473_consen 97 --N-MKGTLIV 104 (104)
T ss_dssp --T-TB-----
T ss_pred --c-ceecccC
Confidence 2 6777765
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.4e-05 Score=82.16 Aligned_cols=223 Identities=18% Similarity=0.244 Sum_probs=135.2
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCee-EEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNL-LLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~-~via~DG~~~~p~~~d~v~i~p 268 (591)
..++|||+-. -|.|.++.|+++.++++|-.. ..+.+|.+|... .--..||.++ ..=.|.|
T Consensus 48 ~vi~iNG~fP-------------GP~I~~~~gD~ivV~v~N~~~-~~~sihWhGv~q~kn~w~DG~~~-----TqCPI~P 108 (563)
T KOG1263|consen 48 QVITINGQFP-------------GPTINAEEGDTIVVNVVNRLD-EPFSIHWHGVRQRKNPWQDGVYI-----TQCPIQP 108 (563)
T ss_pred eeEeecCCCC-------------CCeEEEEeCCEEEEEEEeCCC-CceEEEeccccccCCccccCCcc-----ccCCcCC
Confidence 4789999975 499999999999999999844 455566666432 2234599553 3346899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceE-EEEEecCCCCCCCCCCCCCCCCCc---Ccccccc-cccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGV-AILHYTNSKGKARGPLPEGPNDEF---DKTFSMN-QARSIR 343 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~-ail~y~~~~~~~~~~~p~~p~~~~---~~~~~~~-~~~~~~ 343 (591)
||.|-..++.++..| +||-+++...... .... +++-+.-...+ -|.+ .|..++ -.+|..+ ..+.++
T Consensus 109 g~~~tY~F~v~~q~G-T~~yh~h~~~~Ra-----~G~~G~liI~~~~~~p--~pf~-~pd~E~~ill~dW~~~~~~~~l~ 179 (563)
T KOG1263|consen 109 GENFTYRFTVKDQIG-TLWYHSHVSWQRA-----TGVFGALIINPRPGLP--VPFP-KPDKEFTILLGDWYKNLNHKNLK 179 (563)
T ss_pred CCeEEEEEEeCCcce-eEEEeeccccccc-----cCceeEEEEcCCccCC--CCCC-CCCceeEEEeEeeccccCHHHHH
Confidence 999999999997788 9999888754221 1123 33333211101 1111 111100 0012111 111111
Q ss_pred cccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 344 WNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 344 ~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
..+..+...|.+ . ....|||.+-
T Consensus 180 ~~~~~~~~~p~~------------------------~---D~~~iNg~~g------------------------------ 202 (563)
T KOG1263|consen 180 NFLDRTGALPNP------------------------S---DGVLINGRSG------------------------------ 202 (563)
T ss_pred HhhccCCCCCCC------------------------C---CceEECCCCC------------------------------
Confidence 111111000100 0 1234555431
Q ss_pred CCCcceEEEeccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAIL 501 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~ir 501 (591)
..+.|+..++++.|+++.|.|.|.+ ...+ |.+-||...||+.++ .+ ..|.--|++.|.+|+...+.
T Consensus 203 ~~~~~~~~l~v~pGktY~lRiiN~g~~~~l~-F~I~~H~ltvVe~Dg-~y----------~~p~~~~~l~i~~GQ~~~vL 270 (563)
T KOG1263|consen 203 FLYNCTPTLTVEPGKTYRLRIINAGLNTSLN-FSIANHQLTVVEVDG-AY----------TKPFTTDSLDIHPGQTYSVL 270 (563)
T ss_pred cccCceeEEEEcCCCEEEEEEEccccccceE-EEECCeEEEEEEecc-eE----------EeeeeeceEEEcCCcEEEEE
Confidence 1122467788999999999999976 3345 999999999999963 22 22566799999999999999
Q ss_pred EEeCC-ccc
Q 007735 502 VSLDN-VGI 509 (591)
Q Consensus 502 f~adN-pG~ 509 (591)
..+|. |+.
T Consensus 271 vtadq~~~~ 279 (563)
T KOG1263|consen 271 LTADQSPGD 279 (563)
T ss_pred EeCCCCCCc
Confidence 99986 453
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.5e-06 Score=69.96 Aligned_cols=84 Identities=13% Similarity=0.195 Sum_probs=55.9
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCC-CCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHF 132 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 132 (591)
|-...|++++||+| +++|.-..++++.++...... ....++... +...+.||+++++.|.. +|+|.|||. .
T Consensus 14 F~P~~i~v~~G~~V--~~~N~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~--~ 86 (99)
T TIGR02656 14 FEPAKISIAAGDTV--EWVNNKGGPHNVVFDEDAVPAGVKELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE--P 86 (99)
T ss_pred EeCCEEEECCCCEE--EEEECCCCCceEEECCCCCccchhhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC--C
Confidence 33568999999986 555775566666655321110 000011111 23457899999998874 899999998 6
Q ss_pred hhhcCceeeEEEe
Q 007735 133 QRASGGFGGFIIN 145 (591)
Q Consensus 133 q~~~Gl~G~liV~ 145 (591)
+..+||.|.|+|+
T Consensus 87 H~~aGM~G~I~V~ 99 (99)
T TIGR02656 87 HRGAGMVGKITVE 99 (99)
T ss_pred ccccCCEEEEEEC
Confidence 7888999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.3e-05 Score=72.81 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=77.9
Q ss_pred eEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC-
Q 007735 429 TSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN- 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN- 506 (591)
...+.++.|+++.|.|.|.+.. .+.||++||+|+||+.++.. ..|...|++.+.+|+.+.+.++++.
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~-----------v~p~~~~~l~l~~G~R~dvlv~~~~~ 127 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAADGVP-----------VEPYKVDTLVLAPGQRYDVLVTADQP 127 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEE-----------EEEEEESBEEE-TTEEEEEEEEECSC
T ss_pred cceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeecccc-----------ccccccceEEeeCCeEEEEEEEeCCC
Confidence 3567788999999999998754 89999999999999996432 1277889999999999999999987
Q ss_pred ccceeeec----ccccchhccceEEEEEec
Q 007735 507 VGIWNLRT----ENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 507 pG~W~~HC----Hil~H~~~GM~~~~~V~~ 532 (591)
+|.|.++| +...+...++.+.+.+.+
T Consensus 128 ~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~ 157 (159)
T PF00394_consen 128 PGNYWIRASYQHDSINDPQNGNALAILRYD 157 (159)
T ss_dssp SSEEEEEEEESSSSSHSHGGGTTEEEEEET
T ss_pred CCeEEEEEecccCCCccCCCcEEEEEEEEC
Confidence 99999999 667788899988887653
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=8.9e-05 Score=81.29 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=68.4
Q ss_pred ecCCCeee--EEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEE
Q 007735 39 ASPLGVPQ--QVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQ 116 (591)
Q Consensus 39 ~~~dG~~~--~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~ 116 (591)
+..+|.+. .+....=.|--+.|+|++||.|.++++|.-...-.+ ||...... |+ +.-+.||++-+..|+
T Consensus 534 v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi--HGF~Ip~~----nI---~~dv~PG~t~svtF~ 604 (635)
T PRK02888 534 VIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT--HGFAIPNY----GV---NMEVAPQATASVTFT 604 (635)
T ss_pred eEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc--cceeeccc----Cc---cEEEcCCceEEEEEE
Confidence 45677554 445556677667899999999999999952211111 56544221 11 245789999999999
Q ss_pred eCCceeeeEEecCh---hhhhhcCceeeEEEecC
Q 007735 117 VKDQVGSFFYFPSL---HFQRASGGFGGFIINNR 147 (591)
Q Consensus 117 ~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~ 147 (591)
+ +++|+|||||.. ..+ .+|.|-|+|+++
T Consensus 605 a-dkPGvy~~~CtefCGa~H--~~M~G~~iVep~ 635 (635)
T PRK02888 605 A-DKPGVYWYYCTWFCHALH--MEMRGRMLVEPK 635 (635)
T ss_pred c-CCCEEEEEECCcccccCc--ccceEEEEEEeC
Confidence 8 799999999995 233 389999999873
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=97.77 E-value=3.4e-05 Score=65.58 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=53.0
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC------C-CCCccCCCCcEEEEEEeCCceeeeEEe
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL------G-TNCPIPPKWNWTYQFQVKDQVGSFFYF 127 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~------~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH 127 (591)
|-.+.|++++||+|+ +.|.-..++++.+=- ..+..|.. . ....+.||+++++.|+ ++|+|.|+
T Consensus 14 F~P~~i~V~~G~tV~--~~n~~~~~Hnv~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G~y~y~ 83 (99)
T PF00127_consen 14 FDPSEITVKAGDTVT--FVNNDSMPHNVVFVA-----DGMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPGTYEYY 83 (99)
T ss_dssp EESSEEEEETTEEEE--EEEESSSSBEEEEET-----TSSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSEEEEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceEEEec-----ccccccccccccCccccceecCCCCEEEEEeC---CCeEEEEE
Confidence 335789999999865 556544455544321 01111110 0 1234789999999998 58999999
Q ss_pred cChhhhhhcCceeeEEEe
Q 007735 128 PSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 128 ~H~~~q~~~Gl~G~liV~ 145 (591)
|. - +...||.|.|+|+
T Consensus 84 C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 84 CT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp ET-T-TGGTTSEEEEEEE
T ss_pred cC-C-CcccCCEEEEEEC
Confidence 98 3 7888999999985
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00035 Score=57.23 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=50.9
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
|-.+.|++++||+|. +.|.-..++++++..-. +|... ....+.||+++++.|+ ++|+|-|||-.+.
T Consensus 8 F~P~~i~v~~GdtVt--~~N~d~~~Hnv~~~~g~-------~~~~~~~~~~~~~g~~~~~tf~---~~G~y~y~C~~Hp- 74 (83)
T TIGR02657 8 YETPELHVKVGDTVT--WINREAMPHNVHFVAGV-------LGEAALKGPMMKKEQAYSLTFT---EAGTYDYHCTPHP- 74 (83)
T ss_pred EcCCEEEECCCCEEE--EEECCCCCccEEecCCC-------CccccccccccCCCCEEEEECC---CCEEEEEEcCCCC-
Confidence 335789999999975 57876567777765421 11110 1123577888877664 6899999998654
Q ss_pred hhcCceeeEEEe
Q 007735 134 RASGGFGGFIIN 145 (591)
Q Consensus 134 ~~~Gl~G~liV~ 145 (591)
+|.|.++|+
T Consensus 75 ---~M~G~v~V~ 83 (83)
T TIGR02657 75 ---FMRGKVVVE 83 (83)
T ss_pred ---CCeEEEEEC
Confidence 499999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00028 Score=64.39 Aligned_cols=89 Identities=16% Similarity=0.063 Sum_probs=57.4
Q ss_pred EEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCC-CCCccceEEeCC---C--cEEEEEE
Q 007735 430 SVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKW-DGIARTTTQVYP---G--AWTAILV 502 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~-~p~~rDTv~Vpp---~--g~~~irf 502 (591)
+.+.++.|+.|++++.|.+. ..|.|-||.+.- .+... + +.+ .|..-..-.+|+ | ++..+.|
T Consensus 52 P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~--------~~~~~-p---~mdG~~~~~~~~i~p~~~~g~~~~~~~tf 119 (148)
T TIGR03095 52 PTIVIPEGVTVHFTVINTDTDSGHNFDISKRGP--------PYPYM-P---GMDGLGFVAGTGFLPPPKSGKFGYTDFTY 119 (148)
T ss_pred CEEEEcCCCEEEEEEEeCCCCccccEEeecCCC--------ccccc-c---ccCCCCccccCcccCCCCCCccceeEEEE
Confidence 34678899999999999865 567666653321 11000 0 000 011112222232 2 2467888
Q ss_pred EeCCccceeeecccccchhccceEEEEE
Q 007735 503 SLDNVGIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 503 ~adNpG~W~~HCHil~H~~~GM~~~~~V 530 (591)
+++.+|.+.||||+..|...||-..+.|
T Consensus 120 ~f~~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 120 HFSTAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred ECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence 8899999999999999999999998877
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00043 Score=58.75 Aligned_cols=83 Identities=17% Similarity=0.083 Sum_probs=58.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|+|+ |.+...|.+.++...+.. +.. .....+..+++.+.||....+.|.. ||.
T Consensus 17 ~~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~pG~t~~~tF~~--~G~ 79 (99)
T TIGR02656 17 AKISIAAGDTVEWV--NNKGGPHNVVFDEDAVPA-----GVK--------ELAKSLSHKDLLNSPGESYEVTFST--PGT 79 (99)
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEECCCCCcc-----chh--------hhcccccccccccCCCCEEEEEeCC--CEE
Confidence 45778899999887 666778888775432211 000 0011233467788999998877654 999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|||-. |..+||...+.|.
T Consensus 80 y~y~C~~--H~~aGM~G~I~V~ 99 (99)
T TIGR02656 80 YTFYCEP--HRGAGMVGKITVE 99 (99)
T ss_pred EEEEcCC--ccccCCEEEEEEC
Confidence 9999994 9999999999873
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0011 Score=62.05 Aligned_cols=104 Identities=20% Similarity=0.249 Sum_probs=73.6
Q ss_pred EEEECCCCCC-CcEEeeCCCEEEEEEEECCCCCce--eeecCccC--CCCCCCCCCC----C------CCCccCCCCcEE
Q 007735 48 VIAINGKFPG-PTINVTTNNNVVVNVRNKLDESLL--IHWSGIQQ--RRSSWQDGLL----G------TNCPIPPKWNWT 112 (591)
Q Consensus 48 ~~~~Ng~~pg-P~i~v~~Gd~v~v~v~N~l~~~~s--iH~HG~~~--~~~~~~DGv~----~------tq~~I~PG~~~~ 112 (591)
.+-|||..-| ++|.+..|.+|.|+|+|.-.-+++ |=--+-.+ ......||.. | +...|.+|++..
T Consensus 75 ~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~ 154 (196)
T PF06525_consen 75 PFNFNGTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSAS 154 (196)
T ss_pred ceeeecccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceee
Confidence 5677886544 799999999999999998433322 22222221 1233566631 2 124688999998
Q ss_pred EEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCC
Q 007735 113 YQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPF 154 (591)
Q Consensus 113 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~ 154 (591)
-.|... ++|.|||-|-.-.|+.+||++-|+|.+.- ..||
T Consensus 155 ~~~~~l-~aG~YwlvC~ipGHA~sGMw~~LiVs~~v--t~Py 193 (196)
T PF06525_consen 155 GVYNDL-PAGYYWLVCGIPGHAESGMWGVLIVSSNV--TVPY 193 (196)
T ss_pred EEEccC-CCceEEEEccCCChhhcCCEEEEEEecCc--ccce
Confidence 777553 69999999999999999999999999743 3454
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00079 Score=58.61 Aligned_cols=75 Identities=11% Similarity=0.056 Sum_probs=50.0
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeee-cCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHW-SGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~-HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~ 135 (591)
...|+|++||+|+....|. ++++.+ .+. ..||... ..-.+|+++++.| +++|+|=|+|- .+..
T Consensus 14 P~~v~V~~GdTV~f~n~d~---~Hnv~~~~~~------~p~g~~~--~~s~~g~~~~~tF---~~~G~Y~Y~C~--pH~~ 77 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK---GHNVETIKGM------IPEGAEA--FKSKINEEYTVTV---TEEGVYGVKCT--PHYG 77 (116)
T ss_pred CCEEEECCCCEEEEEECCC---CeeEEEccCC------CcCCccc--ccCCCCCEEEEEe---CCCEEEEEEcC--CCcc
Confidence 4689999999988777765 444443 221 1122211 1123566655555 36899999998 6778
Q ss_pred cCceeeEEEecC
Q 007735 136 SGGFGGFIINNR 147 (591)
Q Consensus 136 ~Gl~G~liV~~~ 147 (591)
.||.|.|+|.++
T Consensus 78 ~GM~G~V~Vg~~ 89 (116)
T TIGR02375 78 MGMVALIQVGDP 89 (116)
T ss_pred CCCEEEEEECCC
Confidence 899999999985
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0029 Score=58.11 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=69.2
Q ss_pred EEECCCCCC-CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCC-------CCCCCCC----CCC------CccCCCCc
Q 007735 49 IAINGKFPG-PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS-------SWQDGLL----GTN------CPIPPKWN 110 (591)
Q Consensus 49 ~~~Ng~~pg-P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~-------~~~DGv~----~tq------~~I~PG~~ 110 (591)
+-|||+-.| |+|.+..|-+|.|+|+|.-..++++-. -+..+ ...||.. |.. ..|.+|++
T Consensus 75 fNfnGts~G~mtIyiPaGw~V~V~f~N~e~~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs 151 (195)
T TIGR03094 75 FNFNGTSYGAMTIYLPAGWNVYVTFTNYESLPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHS 151 (195)
T ss_pred ccccCccCCceEEEEeCCCEEEEEEEcCCCCCccEEE---ecCCCCCCCccccccCceeEeecccccCccccccccccce
Confidence 567887665 799999999999999999554544332 12121 2357743 322 34667888
Q ss_pred EEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCC
Q 007735 111 WTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148 (591)
Q Consensus 111 ~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 148 (591)
..=.|+. -++|+|||-|-.-.+..+||+|-+||.+.-
T Consensus 152 ~sg~~~~-~~~G~YwlvCgipGHAesGMw~~lIVSs~v 188 (195)
T TIGR03094 152 RSGWWND-TSAGKYWLVCGITGHAESGMWAVVIVSSNV 188 (195)
T ss_pred eEEEecc-CCCeeEEEEcccCChhhcCcEEEEEEecCc
Confidence 5555554 589999999999999999999999999743
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0014 Score=58.12 Aligned_cols=59 Identities=12% Similarity=0.226 Sum_probs=49.8
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|.+.|.++..|.|-++++.+ ...++||....++|.++-||.+
T Consensus 62 ~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---------------------------s~~I~pGet~TitF~adKpG~Y 114 (135)
T TIGR03096 62 ALVVKKGTPVKVTVENKSPISEGFSIDAYGI---------------------------SEVIKAGETKTISFKADKAGAF 114 (135)
T ss_pred EEEECCCCEEEEEEEeCCCCccceEECCCCc---------------------------ceEECCCCeEEEEEECCCCEEE
Confidence 4678899999999999988888777665421 3467889999999999999999
Q ss_pred eeeccc
Q 007735 511 NLRTEN 516 (591)
Q Consensus 511 ~~HCHi 516 (591)
.|||-.
T Consensus 115 ~y~C~~ 120 (135)
T TIGR03096 115 TIWCQL 120 (135)
T ss_pred EEeCCC
Confidence 999998
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0051 Score=54.18 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=50.3
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcC
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASG 137 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 137 (591)
-.|+|++||+ |++.|.-...++++.-+.- .+ +|.- ...-.+|+++++.|+ ++|+|-|+|-. ++.+|
T Consensus 54 A~v~v~pGDT--Vtw~~~d~~~Hnv~~~~~~---~~--~g~~--~~~~~~~~s~~~Tfe---~~G~Y~Y~C~P--H~~~g 119 (128)
T COG3794 54 AEVTVKPGDT--VTWVNTDSVGHNVTAVGGM---DP--EGSG--TLKAGINESFTHTFE---TPGEYTYYCTP--HPGMG 119 (128)
T ss_pred cEEEECCCCE--EEEEECCCCCceEEEeCCC---Cc--cccc--ccccCCCcceEEEec---ccceEEEEecc--CCCCC
Confidence 4799999999 5667775557666655432 11 2211 123344466666665 49999999975 57789
Q ss_pred ceeeEEEec
Q 007735 138 GFGGFIINN 146 (591)
Q Consensus 138 l~G~liV~~ 146 (591)
|.|.|+|.+
T Consensus 120 M~G~IvV~~ 128 (128)
T COG3794 120 MKGKIVVGE 128 (128)
T ss_pred cEEEEEeCC
Confidence 999999974
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0042 Score=53.17 Aligned_cols=69 Identities=13% Similarity=0.135 Sum_probs=45.5
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|+.+.+++.|.+...|-|.+.+.. .+ ..++||+...+.|.++.||.
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~--------------------------~~-~~l~~g~~~~~~f~~~~~G~ 87 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDLG--------------------------IS-KVLPPGETATVTFTPLKPGE 87 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGGT--------------------------EE-EEE-TT-EEEEEEEE-S-EE
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCCc--------------------------eE-EEECCCCEEEEEEcCCCCEE
Confidence 4567889999999999998888877776521 22 67889999999999999999
Q ss_pred eeeecccccchhccceEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVR 529 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~ 529 (591)
+-|+|-+ |.+ |-..+.
T Consensus 88 y~~~C~~--~~~--m~G~li 103 (104)
T PF13473_consen 88 YEFYCTM--HPN--MKGTLI 103 (104)
T ss_dssp EEEB-SS--S-T--TB----
T ss_pred EEEEcCC--CCc--ceeccc
Confidence 9999998 665 544443
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.018 Score=50.10 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCCCcEEeeCCCEEEEEEEECC-CCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
|=.+.|+|++||+|+ ++|+. ..++++..-+ ... .|- ......||++|+|.|. ++|+|=|+|-. +
T Consensus 39 F~P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~-f~s---~~~~~~~G~t~s~Tf~---~~G~Y~Y~C~p--H 103 (115)
T TIGR03102 39 FDPPAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGD-LDE---SERVSEEGTTYEHTFE---EPGIYLYVCVP--H 103 (115)
T ss_pred EeCCEEEECCCCEEE--EEECCCCCCEEEEECC----CCC-ccc---cccccCCCCEEEEEec---CCcEEEEEccC--C
Confidence 445689999999976 56543 3455554311 001 110 1123578999999885 58999999984 4
Q ss_pred hhcCceeeEEEe
Q 007735 134 RASGGFGGFIIN 145 (591)
Q Consensus 134 ~~~Gl~G~liV~ 145 (591)
...||.|.|+|+
T Consensus 104 ~~~gM~G~I~V~ 115 (115)
T TIGR03102 104 EALGMKGAVVVE 115 (115)
T ss_pred CCCCCEEEEEEC
Confidence 667999999984
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.021 Score=63.16 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=59.0
Q ss_pred eEEEeccCCcEEEEEEecCC---CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC
Q 007735 429 TSVINGTYRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD 505 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~---~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad 505 (591)
...+.++.|+.|.+.+.|.+ +..|.|-+-++.. -+.+.||....+.|++|
T Consensus 554 p~~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI---------------------------~~dv~PG~t~svtF~ad 606 (635)
T PRK02888 554 LREFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGV---------------------------NMEVAPQATASVTFTAD 606 (635)
T ss_pred CceEEecCCCEEEEEEEeCCcccccccceeecccCc---------------------------cEEEcCCceEEEEEEcC
Confidence 34467899999999999974 4577776644321 13567899999999999
Q ss_pred Cccceeeecccccch-hccceEEEEEec
Q 007735 506 NVGIWNLRTENLDSW-YLGQETYVRVVN 532 (591)
Q Consensus 506 NpG~W~~HCHil~H~-~~GM~~~~~V~~ 532 (591)
.||+|.+||...-|. |.+|...+.|.+
T Consensus 607 kPGvy~~~CtefCGa~H~~M~G~~iVep 634 (635)
T PRK02888 607 KPGVYWYYCTWFCHALHMEMRGRMLVEP 634 (635)
T ss_pred CCEEEEEECCcccccCcccceEEEEEEe
Confidence 999999999874443 678999888863
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.041 Score=46.54 Aligned_cols=82 Identities=11% Similarity=0.089 Sum_probs=55.1
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCC-CCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN-SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~-~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
..+.++.|++|.|+.. +...|.+++=- +.+... +..... ..-.+..+.+|....+.|. .||
T Consensus 17 ~~i~V~~G~tV~~~n~--~~~~Hnv~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~G~~~~~tF~--~~G 78 (99)
T PF00127_consen 17 SEITVKAGDTVTFVNN--DSMPHNVVFVA----------DGMPAGADSDYVP----PGDSSPLLAPGETYSVTFT--KPG 78 (99)
T ss_dssp SEEEEETTEEEEEEEE--SSSSBEEEEET----------TSSHTTGGHCHHS----TTCEEEEBSTTEEEEEEEE--SSE
T ss_pred CEEEECCCCEEEEEEC--CCCCceEEEec----------ccccccccccccC----ccccceecCCCCEEEEEeC--CCe
Confidence 4577889999988765 55777766522 111000 000001 1115667888888777776 999
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.+.|+|-. |+.+||-..+.|.
T Consensus 79 ~y~y~C~P--H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 79 TYEYYCTP--HYEAGMVGTIIVE 99 (99)
T ss_dssp EEEEEETT--TGGTTSEEEEEEE
T ss_pred EEEEEcCC--CcccCCEEEEEEC
Confidence 99999993 9999999999884
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.026 Score=49.53 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=50.1
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|+|+ |.+...|.+.+.+..+ + ..+| ..+.||....+.|. .||.+
T Consensus 48 ~i~v~~Gd~V~~~--N~~~~~H~v~~~~~~~---------~-------------~~~~-~~~~pg~t~~~tF~--~~G~y 100 (119)
T PRK02710 48 TLTIKAGDTVKWV--NNKLAPHNAVFDGAKE---------L-------------SHKD-LAFAPGESWEETFS--EAGTY 100 (119)
T ss_pred EEEEcCCCEEEEE--ECCCCCceEEecCCcc---------c-------------cccc-cccCCCCEEEEEec--CCEEE
Confidence 3567789998875 6667788876543210 0 0112 34677877776665 49999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|+|=. |...||-..+.|.
T Consensus 101 ~y~C~~--H~~~gM~G~I~V~ 119 (119)
T PRK02710 101 TYYCEP--HRGAGMVGKITVE 119 (119)
T ss_pred EEEcCC--CccCCcEEEEEEC
Confidence 999985 8889999999873
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.18 Score=43.90 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=48.9
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+..+. .|. |........ ... +.+.-.++.... +.++.||.
T Consensus 15 ~~v~V~~GdTV~f~n~d~---~Hn---------v~~~~~~~p--~g~-----------~~~~s~~g~~~~--~tF~~~G~ 67 (116)
T TIGR02375 15 AYIRAAPGDTVTFVPTDK---GHN---------VETIKGMIP--EGA-----------EAFKSKINEEYT--VTVTEEGV 67 (116)
T ss_pred CEEEECCCCEEEEEECCC---Cee---------EEEccCCCc--CCc-----------ccccCCCCCEEE--EEeCCCEE
Confidence 456788999999998864 242 222111000 000 001112455544 45578999
Q ss_pred eeeecccccchhccceEEEEEecCCC
Q 007735 510 WNLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
+-|+|=. |..+||-..+.|.+|..
T Consensus 68 Y~Y~C~p--H~~~GM~G~V~Vg~~~~ 91 (116)
T TIGR02375 68 YGVKCTP--HYGMGMVALIQVGDPPA 91 (116)
T ss_pred EEEEcCC--CccCCCEEEEEECCCCc
Confidence 9999997 99999999999987643
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.5 Score=42.75 Aligned_cols=89 Identities=10% Similarity=0.101 Sum_probs=65.6
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCC--CCceee---------ecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCcee
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLD--ESLLIH---------WSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVG 122 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH---------~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 122 (591)
.|++-.++++.|++++..++|.-. ...++- -|... ...+++-.+....+.||++-+..|.. .++|
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~~~~~~~~~~~~---~~Dme~d~~~~v~L~PG~s~elvv~f-t~~g 134 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPDKNLEHVTHMIL---ADDMEHDDPNTVTLAPGKSGELVVVF-TGAG 134 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCccccchhHHHhhh---CCccccCCcceeEeCCCCcEEEEEEe-cCCc
Confidence 467788999999999999999843 111211 12221 12344422233569999999999999 4799
Q ss_pred eeEEecChhhhhhcCceeeEEEec
Q 007735 123 SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 123 t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.|=+-|-.-.++..||.|-|.|.+
T Consensus 135 ~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 135 KYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred cEEEEecCCCcccCCcEEEEEeCC
Confidence 999999999999999999998864
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.24 Score=40.35 Aligned_cols=72 Identities=11% Similarity=0.061 Sum_probs=45.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.+..|++|.| .|.+...|..+++.-.+ +.. .++. ..+.+|.... +.++.||.
T Consensus 11 ~~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~-------------~~~~-~~~~~g~~~~--~tf~~~G~ 65 (83)
T TIGR02657 11 PELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEA-------------ALKG-PMMKKEQAYS--LTFTEAGT 65 (83)
T ss_pred CEEEECCCCEEEE--EECCCCCccEEecCCCC-------ccc-------------cccc-cccCCCCEEE--EECCCCEE
Confidence 3467788999887 47777788887653221 000 0111 1234555544 55688999
Q ss_pred eeeecccccchhccceEEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V 530 (591)
|.|||=+ |- .|...+.|
T Consensus 66 y~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 66 YDYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred EEEEcCC--CC--CCeEEEEE
Confidence 9999998 54 48777776
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.64 Score=48.85 Aligned_cols=78 Identities=15% Similarity=0.212 Sum_probs=54.0
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC--CCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL--GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~--~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
++--..+.+..|+ +.+.|+|....++.+-. .+|+. +..-.|.||.+.++.+++ .+|+|=|+|-
T Consensus 40 ~c~p~~~tVpAG~-~~f~V~N~~~~~~Efe~----------~~~~~vv~e~EnIaPG~s~~l~~~L--~pGtY~~~C~-- 104 (375)
T PRK10378 40 QCEPMTLTVNAGK-TQFIIQNHSQKALEWEI----------LKGVMVVEERENIAPGFSQKMTANL--QPGEYDMTCG-- 104 (375)
T ss_pred ccccCceeeCCCC-EEEEEEeCCCCcceEEe----------eccccccccccccCCCCceEEEEec--CCceEEeecC--
Confidence 4545689999996 89999999655533210 02221 122469999999988877 5999999993
Q ss_pred hhhhcCceeeEEEecCC
Q 007735 132 FQRASGGFGGFIINNRA 148 (591)
Q Consensus 132 ~q~~~Gl~G~liV~~~~ 148 (591)
.+ ..+.|.|+|.+..
T Consensus 105 ~~--~~~~g~l~Vtg~~ 119 (375)
T PRK10378 105 LL--TNPKGKLIVKGEA 119 (375)
T ss_pred cC--CCCCceEEEeCCC
Confidence 32 3358999998753
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.69 Score=40.23 Aligned_cols=74 Identities=14% Similarity=-0.007 Sum_probs=48.1
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+-++ +...|.... .+.+.|+. ......+|....+.| +.||.
T Consensus 42 ~~ltV~~GdTVtw~~~~-d~~~HnV~s---------~~~~~f~s--------------~~~~~~~G~t~s~Tf--~~~G~ 95 (115)
T TIGR03102 42 PAIRVDPGTTVVWEWTG-EGGGHNVVS---------DGDGDLDE--------------SERVSEEGTTYEHTF--EEPGI 95 (115)
T ss_pred CEEEECCCCEEEEEECC-CCCCEEEEE---------CCCCCccc--------------cccccCCCCEEEEEe--cCCcE
Confidence 34678889999987543 345665432 22222321 111234566655555 78999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+-|+|=. |..+||-..+.|.
T Consensus 96 Y~Y~C~p--H~~~gM~G~I~V~ 115 (115)
T TIGR03102 96 YLYVCVP--HEALGMKGAVVVE 115 (115)
T ss_pred EEEEccC--CCCCCCEEEEEEC
Confidence 9999998 9999999999873
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.63 Score=40.88 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=49.2
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChh-hhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH-FQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~q~~ 135 (591)
.+.|.+..|+.|++++++. +.-+++...++. -+.-+-||+.-...|++ +++|+|++.|..= ...-
T Consensus 45 ~~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~------------~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~gH 110 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE-DVIHSFWIPELG------------IKMDAIPGRTNSVTFTP-DKPGTYYGQCAEYCGAGH 110 (120)
T ss_dssp SSEEEEETTSEEEEEEEES-SS-EEEEETTCT------------EEEEEBTTCEEEEEEEE-SSSEEEEEEE-SSSSTTG
T ss_pred cceecccccceEeEEEEcC-CccccccccccC------------cccccccccceeeeeee-ccCCcEEEcCccccCcCc
Confidence 5789999999999999996 333333333321 12446899999999998 6899999999841 1112
Q ss_pred cCceeeEEE
Q 007735 136 SGGFGGFII 144 (591)
Q Consensus 136 ~Gl~G~liV 144 (591)
.-|.|-++|
T Consensus 111 ~~M~~~v~V 119 (120)
T PF00116_consen 111 SFMPGKVIV 119 (120)
T ss_dssp GG-EEEEEE
T ss_pred CCCeEEEEE
Confidence 236666654
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.46 E-value=1.2 Score=39.19 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=54.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|.+.+.+. +..|.|.+-+... -+.+.||....+.|.++.||.
T Consensus 46 ~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~---------------------------k~d~~PG~~~~~~~~~~~~G~ 97 (120)
T PF00116_consen 46 NELVLPAGQPVRFHLTSE-DVIHSFWIPELGI---------------------------KMDAIPGRTNSVTFTPDKPGT 97 (120)
T ss_dssp SEEEEETTSEEEEEEEES-SS-EEEEETTCTE---------------------------EEEEBTTCEEEEEEEESSSEE
T ss_pred ceecccccceEeEEEEcC-CccccccccccCc---------------------------ccccccccceeeeeeeccCCc
Confidence 457788999999999986 5788877754332 134578889999999999999
Q ss_pred eeeecccccc-hhccceEEEEEe
Q 007735 510 WNLRTENLDS-WYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H-~~~GM~~~~~V~ 531 (591)
+-..|..+=. -|..|...++|+
T Consensus 98 y~~~C~e~CG~gH~~M~~~v~VV 120 (120)
T PF00116_consen 98 YYGQCAEYCGAGHSFMPGKVIVV 120 (120)
T ss_dssp EEEEE-SSSSTTGGG-EEEEEEE
T ss_pred EEEcCccccCcCcCCCeEEEEEC
Confidence 9999997544 467777777764
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.44 E-value=0.71 Score=41.77 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=65.7
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+++..++.|.....|=|=+- ++.... +.+.... ...-..---..++.|.||....+-+.+.++|.+-
T Consensus 65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~--~~~~~~~--~~~Dme~d~~~~v~L~PG~s~elvv~ft~~g~ye 137 (158)
T COG4454 65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNL--EHVTHMI--LADDMEHDDPNTVTLAPGKSGELVVVFTGAGKYE 137 (158)
T ss_pred ccccCCcEEeeeecCcccceEEEecc---Cccccc--hhHHHhh--hCCccccCCcceeEeCCCCcEEEEEEecCCccEE
Confidence 34677999999999998888866554 211111 1111000 0000011235689999999999999999999999
Q ss_pred eecccccchhccceEEEEEe
Q 007735 512 LRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHil~H~~~GM~~~~~V~ 531 (591)
|-|-|-.|-+.||-.-++|.
T Consensus 138 ~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 138 FACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred EEecCCCcccCCcEEEEEeC
Confidence 99999999999999998874
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.83 Score=44.02 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=57.2
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|++.+.+.| -.|.| +|-+.+ ..+| +-||....+.|.++.||.
T Consensus 117 ~~l~vp~g~~v~~~~ts~D-V~Hsf-------~ip~~~-----------------~k~d---a~PG~~~~~~~~~~~~G~ 168 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD-VIHSF-------WVPELG-----------------GKID---AIPGQYNALWFNADEPGV 168 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc-hhhcc-------cccccC-----------------ceEE---ecCCcEEEEEEEeCCCEE
Confidence 4567889999999999864 44544 442221 1233 567888999999999999
Q ss_pred eeeecccccc-hhccceEEEEEecCCC
Q 007735 510 WNLRTENLDS-WYLGQETYVRVVNPEA 535 (591)
Q Consensus 510 W~~HCHil~H-~~~GM~~~~~V~~p~~ 535 (591)
+...|-..-. .|..|...++|+.+++
T Consensus 169 y~~~c~e~cG~~h~~M~~~v~v~~~~~ 195 (201)
T TIGR02866 169 YYGYCAELCGAGHSLMLFKVVVVEREE 195 (201)
T ss_pred EEEEehhhCCcCccCCeEEEEEECHHH
Confidence 9999986443 4788888999887653
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=90.17 E-value=1.3 Score=38.76 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCcEEeeCC-CEEEEEEEECCCCCceeeec--------------------CccCCCCCCCC-CCCCCCCccCCCCcEEEE
Q 007735 57 GPTINVTTN-NNVVVNVRNKLDESLLIHWS--------------------GIQQRRSSWQD-GLLGTNCPIPPKWNWTYQ 114 (591)
Q Consensus 57 gP~i~v~~G-d~v~v~v~N~l~~~~siH~H--------------------G~~~~~~~~~D-Gv~~tq~~I~PG~~~~Y~ 114 (591)
-..|.|..+ ..|.|+|+|.-.-+...-=| |+...--+..| -|...-.-|.|||+.+..
T Consensus 15 ~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~svt 94 (125)
T TIGR02695 15 TKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSVT 94 (125)
T ss_pred ccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEEE
Confidence 457999984 78999999973322111112 11100001111 111112458999999999
Q ss_pred EEeCC-ceee-eEEecChhhhhhcCceeeEE
Q 007735 115 FQVKD-QVGS-FFYFPSLHFQRASGGFGGFI 143 (591)
Q Consensus 115 f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~li 143 (591)
|+++. ++|+ |-|.|..-.+.. .|.|.|.
T Consensus 95 F~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~ 124 (125)
T TIGR02695 95 FDVSKLSAGEDYTFFCSFPGHWA-MMRGTVK 124 (125)
T ss_pred EECCCCCCCCcceEEEcCCCcHH-hceEEEe
Confidence 99863 5776 999999877765 5888875
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.28 E-value=3.1 Score=36.81 Aligned_cols=73 Identities=12% Similarity=-0.011 Sum_probs=46.8
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++++.|++|+|+ |.+...|..+.=+-. +|..-+++..-.+.....-| +-||.+
T Consensus 55 ~v~v~pGDTVtw~--~~d~~~Hnv~~~~~~----------------------~~~g~~~~~~~~~~s~~~Tf--e~~G~Y 108 (128)
T COG3794 55 EVTVKPGDTVTWV--NTDSVGHNVTAVGGM----------------------DPEGSGTLKAGINESFTHTF--ETPGEY 108 (128)
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCC----------------------CcccccccccCCCcceEEEe--cccceE
Confidence 4567889999987 455557765442221 11112233333344544444 459999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.|-. |.-+||-..+.|.
T Consensus 109 ~Y~C~P--H~~~gM~G~IvV~ 127 (128)
T COG3794 109 TYYCTP--HPGMGMKGKIVVG 127 (128)
T ss_pred EEEecc--CCCCCcEEEEEeC
Confidence 999999 9999999999885
|
|
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.20 E-value=3 Score=41.46 Aligned_cols=79 Identities=13% Similarity=0.095 Sum_probs=57.4
Q ss_pred eEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 429 TSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
.+.+.++.|+.|++.+... +-.|.| +|-+- +--+.+-||-...+.+.++.||
T Consensus 136 ~n~l~lPv~~~V~f~ltS~-DViHsF-------~IP~l--------------------~~k~d~iPG~~~~~~~~~~~~G 187 (247)
T COG1622 136 VNELVLPVGRPVRFKLTSA-DVIHSF-------WIPQL--------------------GGKIDAIPGMTTELWLTANKPG 187 (247)
T ss_pred cceEEEeCCCeEEEEEEec-hhceeE-------EecCC--------------------CceeeecCCceEEEEEecCCCe
Confidence 3557788899999999876 456654 44332 2223446778888899999999
Q ss_pred ceeeecccccch-hccceEEEEEecCCC
Q 007735 509 IWNLRTENLDSW-YLGQETYVRVVNPEA 535 (591)
Q Consensus 509 ~W~~HCHil~H~-~~GM~~~~~V~~p~~ 535 (591)
.+..+|+.+--. |..|-..+.|+++++
T Consensus 188 ~Y~g~Cae~CG~gH~~M~~~v~vvs~~~ 215 (247)
T COG1622 188 TYRGICAEYCGPGHSFMRFKVIVVSQED 215 (247)
T ss_pred EEEEEcHhhcCCCcccceEEEEEEcHHH
Confidence 999999986655 666667788887765
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=84.96 E-value=6 Score=38.07 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=55.2
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~ 135 (591)
...|.+..|+.|++++++.- .+ ||...+. . | -+.-+-||..-+..|++ +++|+|...|.. -...-
T Consensus 116 ~~~l~vp~g~~v~~~~ts~D----V~--Hsf~ip~---~-~---~k~da~PG~~~~~~~~~-~~~G~y~~~c~e~cG~~h 181 (201)
T TIGR02866 116 VNELVVPAGTPVRLQVTSKD----VI--HSFWVPE---L-G---GKIDAIPGQYNALWFNA-DEPGVYYGYCAELCGAGH 181 (201)
T ss_pred cCEEEEEcCCEEEEEEEeCc----hh--hcccccc---c-C---ceEEecCCcEEEEEEEe-CCCEEEEEEehhhCCcCc
Confidence 45899999999999999861 22 5554321 1 1 13456789998889987 799999999984 12222
Q ss_pred cCceeeEEEecC
Q 007735 136 SGGFGGFIINNR 147 (591)
Q Consensus 136 ~Gl~G~liV~~~ 147 (591)
+.|.+-++|.++
T Consensus 182 ~~M~~~v~v~~~ 193 (201)
T TIGR02866 182 SLMLFKVVVVER 193 (201)
T ss_pred cCCeEEEEEECH
Confidence 568899988874
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=82.05 E-value=38 Score=32.22 Aligned_cols=95 Identities=12% Similarity=-0.047 Sum_probs=57.1
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCC----CCCCC--CCCCCCccceEEeCCCcEEEEEEEeC
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN----SRGTY--NKWDGIARTTTQVYPGAWTAILVSLD 505 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~----~~~~~--n~~~p~~rDTv~Vpp~g~~~irf~ad 505 (591)
+.++.|-.|++.+.|.+...| .|-|+..+....... +.+.. --..+.--..--+++|......+..-
T Consensus 88 i~VPAGw~V~i~f~N~~~l~H-------nl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~~~~~~l 160 (196)
T PF06525_consen 88 IYVPAGWNVQITFTNQESLPH-------NLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSASGVYNDL 160 (196)
T ss_pred EEEcCCCEEEEEEEcCCCCCe-------eEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceeeEEEccC
Confidence 456789899999999987776 566664432211110 00000 00000000001223455555455555
Q ss_pred CccceeeecccccchhccceEEEEEecC
Q 007735 506 NVGIWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 506 NpG~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.||.+.+=|-+-.|...||-..+.|.+.
T Consensus 161 ~aG~YwlvC~ipGHA~sGMw~~LiVs~~ 188 (196)
T PF06525_consen 161 PAGYYWLVCGIPGHAESGMWGVLIVSSN 188 (196)
T ss_pred CCceEEEEccCCChhhcCCEEEEEEecC
Confidence 6999999999999999999999988754
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.83 E-value=5.4 Score=39.64 Aligned_cols=78 Identities=8% Similarity=-0.073 Sum_probs=57.8
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~ 135 (591)
...|.+..|.+|+++++-. +.-+++...++. -+.-.-||...++.+++ +++|+|.-+|+. .+..-
T Consensus 136 ~n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~------------~k~d~iPG~~~~~~~~~-~~~G~Y~g~Cae~CG~gH 201 (247)
T COG1622 136 VNELVLPVGRPVRFKLTSA-DVIHSFWIPQLG------------GKIDAIPGMTTELWLTA-NKPGTYRGICAEYCGPGH 201 (247)
T ss_pred cceEEEeCCCeEEEEEEec-hhceeEEecCCC------------ceeeecCCceEEEEEec-CCCeEEEEEcHhhcCCCc
Confidence 3899999999999999877 333333322221 23456788888888987 799999999994 45555
Q ss_pred cCceeeEEEecCC
Q 007735 136 SGGFGGFIINNRA 148 (591)
Q Consensus 136 ~Gl~G~liV~~~~ 148 (591)
..|.|.++|.+++
T Consensus 202 ~~M~~~v~vvs~~ 214 (247)
T COG1622 202 SFMRFKVIVVSQE 214 (247)
T ss_pred ccceEEEEEEcHH
Confidence 6799999999864
|
|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=80.71 E-value=12 Score=32.94 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=52.9
Q ss_pred ceeEEEec-CCEEEEEEeEeCCcc----eEEEEEe-CCeeEEEe-------ecCCceee----eeeeEEEEccccEEEEE
Q 007735 213 YETIEVHP-GKTYRIRVHNVGIST----SLNFRIQ-NHNLLLAE-------TEGSYTVQ----QNYTSLDIHVGQSYSFL 275 (591)
Q Consensus 213 ~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~-gh~~~via-------~DG~~~~p----~~~d~v~i~pGqR~dvl 275 (591)
...|+|++ ++.+.+.|-|.|... .|++-|- .-+++-|+ .|-.|+++ +...+=.|++||..+|.
T Consensus 15 ~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~svt 94 (125)
T TIGR02695 15 TKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSVT 94 (125)
T ss_pred ccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEEE
Confidence 47899998 488999999998542 3554442 22333332 24456643 23456689999999999
Q ss_pred EEeCC-CCCcceEEEEee
Q 007735 276 VTMDQ-NASTDYYIVASA 292 (591)
Q Consensus 276 v~~~~-~~g~~y~i~~~~ 292 (591)
++++. .+|.+|...++-
T Consensus 95 F~~~~l~~g~~Y~f~CSF 112 (125)
T TIGR02695 95 FDVSKLSAGEDYTFFCSF 112 (125)
T ss_pred EECCCCCCCCcceEEEcC
Confidence 99863 455479887754
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 591 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 4e-54 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 6e-26 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 3e-24 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 3e-24 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 2e-23 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 9e-23 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 6e-22 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 6e-22 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 2e-21 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 2e-21 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 2e-21 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 4e-21 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 6e-21 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 7e-21 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 2e-20 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 3e-20 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 3e-20 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 7e-20 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 5e-16 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 4e-15 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 2e-14 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 2e-13 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 2e-13 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 3e-13 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 2e-11 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 2e-08 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 3e-05 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 547 bits (1412), Expect = 0.0
Identities = 153/565 (27%), Positives = 250/565 (44%), Gaps = 54/565 (9%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSG 86
++ +EV Y+ +P V+ ING+FPGPTI ++VVV + NKL E ++IHW G
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 87 IQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145
I QR + W DG + C I P + Y F V D G+FFY L QR++G +G I++
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 146 NRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPYQYN 203
PF DG+I +L+ DW+ ++ L + + +G P +L+NG+G + +
Sbjct: 123 PPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 204 TTLVPD------------GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET 251
D V P KTYRIR+ + +LNF I NH LL+ E
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 252 EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY 311
+G+Y + +DI+ G+SYS L+T DQN S +Y++ R + G+ +L+Y
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH---PNTPPGLTLLNY 298
Query: 312 TNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYV 371
+ LP P + +++++ + ++A+ P P +
Sbjct: 299 LPNSV---SKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIF 348
Query: 372 LRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP-----------TKP 420
L N +I+G + ++ +S P TP A + + A+ + P T P
Sbjct: 349 LLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 421 VTGPPRMETSVINGTYRGFMEVILQN------NDTKMHAYHMSGYAFFVVGMDYGEWTDN 474
R+ V ++VILQN N ++ H +H+ G+ F+V+G G+++
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE 467
Query: 475 SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534
+ N + R T ++P WTAI DN G+W ++G +
Sbjct: 468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 527
Query: 535 ATNKTEFPIPDNALFCGALSHLQKP 559
IP AL CG +
Sbjct: 528 -----VGRIPTKALACGGTAKSLIN 547
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 295 bits (756), Expect = 2e-93
Identities = 130/551 (23%), Positives = 193/551 (35%), Gaps = 67/551 (12%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL-----IH 83
++ SP G + I +NG GP I N+N +NV N LD + IH
Sbjct: 6 VDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIH 64
Query: 84 WSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGF 142
W G+ QR ++W DG G CPI P + Y+F G+F+Y Q G G
Sbjct: 65 WHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPM 124
Query: 143 IINNRA-IIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQ 201
+I + +D D + I + DWY +++ G PD LINGKG Y
Sbjct: 125 VIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYV 177
Query: 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNY 261
+ + V GK YR+R+ ++ + F I H L + E +G T
Sbjct: 178 GGPAA-----ELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232
Query: 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASA---RFVNESQWKRVTGVAILHYTNSKGKA 318
L I GQ YSF++ +Q +Y+I A R + AIL Y + A
Sbjct: 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAA-NA 290
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
PN ++ A+ P P + +
Sbjct: 291 DPTTSANPNPAQLNEADLH-----ALIDPAAPGIPTPGAADVNLRFQLG----------- 334
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
R T++G ++ +PS P L + A D SV
Sbjct: 335 --FSGGRFTINGTAYESPSVPTLLQIMSGAQSAN--DLLP---------AGSVYELPRNQ 381
Query: 439 FMEVILQNNDTKM-HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP-GA 496
+E+++ H +H+ G+AF VV TYN + + R + G
Sbjct: 382 VVELVVPAGVLGGPHPFHLHGHAFSVVRS-------AGSSTYNFVNPVKRDVVSLGVTGD 434
Query: 497 WTAILVSLDNVGIWNLRTENLDSWYLGQE-TYVRVVNPEATNKTEFPIPDNALFCGALSH 555
I DN G W ++L V + T P + A C
Sbjct: 435 EVTIRFVTDNPGPWFFHCHI--EFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDD 492
Query: 556 LQKPEDISAAT 566
L PE S T
Sbjct: 493 LP-PEATSIQT 502
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 2e-87
Identities = 118/517 (22%), Positives = 183/517 (35%), Gaps = 65/517 (12%)
Query: 7 LSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTN 65
SL ++ + L SL AA V D + P G + + G P I +
Sbjct: 5 ASLKSLVVLSLTSLSLAAT--VALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNID 62
Query: 66 NNVVVNVRNKLDESLL-----IHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKD 119
+ +NV ++L ++ + IHW G Q ++ DG CPI P ++ Y F V
Sbjct: 63 DRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPG 122
Query: 120 QVGSFFYFPSLH----FQRASGGFGGFIINNRAI-IPIPFDTPDGDITILIGDWYTRNHT 174
Q G+++Y H Q G G F++ + +D D I I DWY T
Sbjct: 123 QAGTYWY----HSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST 178
Query: 175 ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS 234
L + K PD LING G N + + V GK YR R+ +
Sbjct: 179 VLFP--NPNKAPPAPDTTLINGLGRNSANPS----AGQLAVVSVQSGKRYRFRIVSTSCF 232
Query: 235 TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294
+ F I H + + E +G SL I GQ YS +V +Q +Y+I A+
Sbjct: 233 PNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSN 291
Query: 295 VNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPN 354
+ + AI Y A P + N I + P
Sbjct: 292 GR-NGFTGGINSAIFRYQG----AAVAEPTTSQNSGTALNEANLIPLINPGAPGN---PV 343
Query: 355 PQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKL 414
P G+ ++N+ + RN T++G F+ P+ P+ L
Sbjct: 344 PGGADI--NLNLR---IGRN------ATTADFTINGAPFIPPTVPVLL--------QILS 384
Query: 415 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN 474
P +VI+ +E+ + H +H+ G+ F VV +
Sbjct: 385 GVTNPNDLLP---GGAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVR-----TPGS 434
Query: 475 SRGTYNKWDGIARTTTQVYP-GAWTAILVSLDNVGIW 510
S YN + + R + G DN G W
Sbjct: 435 S--VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 1e-86
Identities = 109/495 (22%), Positives = 178/495 (35%), Gaps = 52/495 (10%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSG 86
+ V T +P G + + NG PGP I +N++++V N L IHW G
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 87 IQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGG 141
I+Q S DG+ G T CPI P TY+FQV Q G+ +Y H Q G FG
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWY----HSHFSLQYGDGLFGP 182
Query: 142 FIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQ 201
IIN P D + I + DW + + T G + L+NG +
Sbjct: 183 LIING----PATADYDEDVGVIFLQDWAHESVFEIWDTARLG-APPALENTLMNGTNTFD 237
Query: 202 YNTTLVPDGI---DYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
+ + P+ + + G YR+R+ NVGI + F I NH L + + V
Sbjct: 238 CSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
+L I +GQ Y +V + A +Y+I + + + IL Y +S
Sbjct: 298 YTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN 356
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
+ P + + + +V G N
Sbjct: 357 PTSVGTTPRGTCEDEPVASLVPHLALDV---GGYSLVDEQVSSAFTNYF----------- 402
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
T++ S + + F + + ++ + E V+
Sbjct: 403 ------TWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVV------ 450
Query: 439 FMEVILQNNDTKM--HAYHMSGYAFFVVGMDYGEWT-DNSRGTYNKWDGIARTTTQVYPG 495
++++ H H+ G+ FF+V + + D S +N + R +
Sbjct: 451 ---YVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGN 507
Query: 496 AWTAILVSLDNVGIW 510
+ AI LDN G W
Sbjct: 508 GYLAIAFKLDNPGSW 522
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 272 bits (698), Expect = 6e-85
Identities = 110/494 (22%), Positives = 170/494 (34%), Gaps = 64/494 (12%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL-----IHW 84
D + P G + + G FPGP I +N + N+L E + IHW
Sbjct: 7 TDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHW 66
Query: 85 SGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGF 139
G Q+ ++W DG T CPI +++Y F V G+++Y H Q G
Sbjct: 67 HGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWY----HSHLTTQYCDGLR 122
Query: 140 GGFIINNRAI-IPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKG 198
G F++ + +D D I + DWY + G D LI+G G
Sbjct: 123 GPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLG 177
Query: 199 PYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
N + I V GK YR+R+ ++ + +F I H++ + ET+G + +
Sbjct: 178 RTHVNVA----AVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQE 233
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
+ I Q YSF++ +Q Y+I A+ E + AIL Y +
Sbjct: 234 LTVDEIQIFAAQRYSFVLNANQPVGN-YWIRANPNSGGEG-FDGGINSAILRYDGATTAD 291
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378
P+ + R V N + N
Sbjct: 292 --PVTVASTVHTKCLIETDLHPLSRNGVPG----------------NPHQGGADCNLNLS 333
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438
+ ++G+SF P+ P+ L T P SVI+
Sbjct: 334 LGFACGNFVINGVSFTPPTVPVLL--------QICSGANTAADLLPS---GSVISLPSNS 382
Query: 439 FMEVILQNNDTKM-HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGA- 496
+E+ L H +H+ G+ F V NS T N D I R +
Sbjct: 383 TIEIALPAGAAGGPHPFHLHGHDFAVSE-----SASNS--TSNYDDPIWRDVVSIGGVGD 435
Query: 497 WTAILVSLDNVGIW 510
I DN G W
Sbjct: 436 NVTIRFCTDNPGPW 449
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 267 bits (685), Expect = 1e-82
Identities = 101/506 (19%), Positives = 180/506 (35%), Gaps = 72/506 (14%)
Query: 28 VYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWS 85
F++ + + G+ + VI NG+FP P I V + V + + N + + + +H+
Sbjct: 3 HTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFH 62
Query: 86 GIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFG 140
G+ Q ++ DG+ T CPI P Y F V VG+++Y H Q G G
Sbjct: 63 GLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWY----HSHTDGQYEDGMKG 118
Query: 141 GFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGL----GMPDGVLING 196
FII + + P +D ++++ + +WY T L K+ + +P +++N
Sbjct: 119 LFIIKDDSF-PYDYD---EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNN 174
Query: 197 KGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256
T EV P TY +R+ NVG S F I++H + + E +G T
Sbjct: 175 TMNL--------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITT 220
Query: 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA---SARFVNESQWKRVTGVAILHYTN 313
+ L I V Q Y+ LV + ++ I+ ++ + + Y
Sbjct: 221 EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNK 280
Query: 314 SKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLR 373
+ + ++ D + +++V +
Sbjct: 281 TAALPTQNYVDSIDNFLDDF-----------YLQPYEKEAIYGEPDHVITVDVV----MD 325
Query: 374 NKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVIN 433
N +G A + I++ P P + D T
Sbjct: 326 NLK----NGVNYAFFNNITYTAPKVPTLMTV------LSSGDQANNSEIYGS--NTHTFI 373
Query: 434 GTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIA------- 486
+E++L N DT H +H+ G+AF + D ++
Sbjct: 374 LEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYP 433
Query: 487 --RTTTQVYPGAWTAILVSLDNVGIW 510
R T V P + I DN G+W
Sbjct: 434 MRRDTLYVRPQSNFVIRFKADNPGVW 459
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 263 bits (674), Expect = 2e-81
Identities = 117/500 (23%), Positives = 178/500 (35%), Gaps = 72/500 (14%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL-----I 82
V D ++ SP G +Q + +NG PGP + + +NV + L + I
Sbjct: 5 VA-DLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSI 63
Query: 83 HWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASG 137
HW G Q ++W DG CPI P ++ Y FQV DQ G+F+Y H Q G
Sbjct: 64 HWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWY----HSHLSTQYCDG 119
Query: 138 GFGGFIINNRAI-IPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLING 196
G F++ + +D + D I + DWY HTA + G D LING
Sbjct: 120 LRGPFVVYDPNDPHASRYDVDNDDTVITLADWY---HTA---AKLGPRFPGGADATLING 173
Query: 197 KGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256
KG ++ + I+V GK YR R+ ++ + + F I HNL + E + +
Sbjct: 174 KGRAPSDSVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNS 228
Query: 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKG 316
S+ I Q YSF++ +Q +Y+I A+ F N + AIL Y +
Sbjct: 229 QPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGN-VGFDGGINSAILRYDGAPA 286
Query: 317 KARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKP 376
++ ++ + P P G + N
Sbjct: 287 VEPTTNQTTSVKPLNEV-----------DLHPLVSTPVPGAPSSGGVDKAINMAFNFNGS 335
Query: 377 PEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436
++G SFV P+ P+ L T P SV
Sbjct: 336 --------NFFINGASFVPPTVPVLL--------QILSGAQTAQDLLPS---GSVYVLPS 376
Query: 437 RGFMEVILQNNDTKM---HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVY 493
+E+ H +H+ G+ F VV YN + I R
Sbjct: 377 NASIEISFPATAAAPGAPHPFHLHGHTFAVVRS-------AGSTVYNYDNPIFRDVVSTG 429
Query: 494 ---PGAWTAILVSLDNVGIW 510
G I +N G W
Sbjct: 430 TPAAGDNVTIRFDTNNPGPW 449
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 251 bits (642), Expect = 5e-76
Identities = 109/504 (21%), Positives = 163/504 (32%), Gaps = 63/504 (12%)
Query: 29 YFDFEVSYITASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSG 86
F+ P GV ++V+ ING GP I + V V V N L IHW G
Sbjct: 37 VFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHG 96
Query: 87 IQQRRSSWQDGLLG-TNCPIPPKWN-WTYQFQVKDQVGSFFYFPSLH----FQRASGGFG 140
I Q+ ++ DG G T CPIPPK TY+++ Q G+ +Y H Q +G G
Sbjct: 97 IXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWY----HSHFSAQYGNGVVG 151
Query: 141 GFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPY 200
IN A +P+D G I D+Y R L D VLING
Sbjct: 152 TIQINGPA--SLPYDIDLG--VFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVN 206
Query: 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260
Y + + PGK +R+R+ N + NH + + +
Sbjct: 207 PNTGEG-----QYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMT 261
Query: 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR-FVNESQWKRVTGVAILHYTNSKGKAR 319
SL + VGQ Y ++ + +Y+ + AI HY + G
Sbjct: 262 VDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGL- 319
Query: 320 GPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEM 379
P EG + R + R P SF N V +
Sbjct: 320 -PTDEGTPPVDHQCLDTLDVRPVV-------PRSVPVNSFVKRPDNTLPVALDLTG---- 367
Query: 380 IDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGF 439
++G + T + P ++ +
Sbjct: 368 -TPLFVWKVNGSDINVDWGKPII-----------DYILTGNTSYPVSDNIVQVDAVDQWT 415
Query: 440 MEVILQ---NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRG----------TYNKWDGIA 486
+I + H H+ G+ F V+G + + N +
Sbjct: 416 YWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPR 475
Query: 487 RTTTQVYPGAWTAILVSLDNVGIW 510
R TT + G W + DN G W
Sbjct: 476 RDTTMLPAGGWLLLAFRTDNPGAW 499
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 1e-56
Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 26/291 (8%)
Query: 30 FDFEVSYITASPLGVPQ-QVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQ 88
FD + +G A NG+ P P I+V ++V VNV N IHW G+
Sbjct: 5 FDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGML 64
Query: 89 QRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGG---FGGFII 144
QR + DG+ T I P +TY+F+ + G+ +Y ++ +G I+
Sbjct: 65 QRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIV 123
Query: 145 NNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNT 204
+ +PI D +++ DW + K + G + D IN K
Sbjct: 124 EPKNPLPIEKT-VTKDYILMLSDWV---SSWANKPGEGGIPGDVFDYYTINAKSFP---- 175
Query: 205 TLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYT-S 263
+ + I V G R+R+ G H +A +G + +
Sbjct: 176 -------ETQPIRVKKGDVIRLRLIGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGDT 227
Query: 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTG-VAILHYTN 313
+ I G+ Y ++ MD + I + K G + + Y
Sbjct: 228 VLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 2e-54
Identities = 63/316 (19%), Positives = 119/316 (37%), Gaps = 29/316 (9%)
Query: 28 VYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSG 86
FD + +T G+ +V NG+ PGP I+V ++V+VNV N IHW G
Sbjct: 4 REFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHG 63
Query: 87 IQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS---GGFGGF 142
+ Q+ + DG+ G T PI ++TY+F+ D++G+ +Y ++ G +G
Sbjct: 64 VHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPL 122
Query: 143 IINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQY 202
I++ + +PI D+ +++ W K + G + + D +N K
Sbjct: 123 IVDPKQPLPIEKR-VTKDVIMMMSTWE---SAVADKYGEGGTPMNVADYFSVNAKSFP-- 176
Query: 203 NTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYT 262
+ + V G +IR G H++L+ +G Y
Sbjct: 177 ---------LTQPLRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYA 226
Query: 263 -SLDIHVGQSYSFLVTMDQNASTDYYIVAS-ARFVNESQWKRVTGVAILHYTNSKGKARG 320
++ + G+ Y ++ D + V + ++ Y G
Sbjct: 227 DTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEY---DGVPVD 281
Query: 321 PLPEGPNDEFDKTFSM 336
+ ++D F
Sbjct: 282 DWYVWKDKDYDPNFFY 297
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 151 bits (382), Expect = 3e-40
Identities = 84/495 (16%), Positives = 144/495 (29%), Gaps = 105/495 (21%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGI 87
+ + + G ++ G FPGPT+ V + V + + N+L E +HW G+
Sbjct: 17 LSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL 76
Query: 88 QQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV-GSFFYFPSLH----FQRASGGFGGF 142
S D IPP +WTY+F V ++ G+F+Y P LH Q +G G
Sbjct: 77 PI--SPKVD---DPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGAL 131
Query: 143 IINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQY 202
++ + IP + +++ D + T D VL+NG
Sbjct: 132 VVESSL-DAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALRPTL 190
Query: 203 NTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ-QNY 261
T R+R+ N + +Q+H L L +G + +
Sbjct: 191 VA---------------QKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEV 235
Query: 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGP 321
+ L + G+ LV + + + + A + G+A
Sbjct: 236 SELLLAPGERAEVLVRLRKEGR--FLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLL 293
Query: 322 LPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMID 381
P + +S P P V R
Sbjct: 294 YLIAPKNPKPLPLPK--------ALSPFPTLPAPV--------------VTRRLVLTEDM 331
Query: 382 GKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFME 441
R ++G F + ++ +E
Sbjct: 332 MAARFFINGQVFDHRRVDLKGQ---------------------------------AQTVE 358
Query: 442 VILQNNDTKM-HAYHMSGYAFFVVGMD-----YGEWTDNSRGTYNKWDGIARTTTQVYPG 495
V N M H +H+ + F V+ + Y W D + G
Sbjct: 359 VWEVENQGDMDHPFHLHVHPFQVLSVGGRPFPYRAWKD---------------VVNLKAG 403
Query: 496 AWTAILVSLDNVGIW 510
+LV L G
Sbjct: 404 EVARLLVPLREKGRT 418
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 6e-33
Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 36/243 (14%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T 101
G+ + + NG+ PGPT+ + + ++ N IH+ G+ + + DG G
Sbjct: 51 GIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107
Query: 102 NCPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFIINNRAIIPIPFDTPD 158
I P ++TY+F G+ Y L A G +GGFI+ + D
Sbjct: 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE----GRPPAD 162
Query: 159 GDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEV 218
++ +++ + T + +NG P+ + ++V
Sbjct: 163 DEMVMVMNGYNTDGG-------------DDNEFYSVNGL-PFHFMD---------FPVKV 199
Query: 219 HPGKTYRIRVHNVGISTSLN-FRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVT 277
+ RI + NV +N F I + T T + ++ GQ +
Sbjct: 200 KQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELR 259
Query: 278 MDQ 280
Sbjct: 260 FPY 262
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 6e-32
Identities = 79/475 (16%), Positives = 148/475 (31%), Gaps = 89/475 (18%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
G NG P P I V + + + V+NKL E+ IHW G+ QDG +
Sbjct: 67 GKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDG--SPH 122
Query: 103 CPIPPKWNWTYQFQV-KDQVGSFFYFPSLHF----QRASGGFGGFIINNRAIIPIPFDTP 157
PI Y+F++ +D G+++Y P H+ Q G G F+I + +
Sbjct: 123 DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKK----DALSH 178
Query: 158 DGDITILIGDWYTRNHTALRKTLDAGKGLG-MPDGVLINGKGPYQYNTTLVPDGIDYETI 216
+ ++I D + + G + VLING+
Sbjct: 179 LKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK----------------P 222
Query: 217 EVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ-QNYTSLDIHVGQSYSFL 275
++ RIR++N + LN RIQ +L T+G + L + L
Sbjct: 223 KIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVL 282
Query: 276 VTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335
+ ++ + + + SA + + + + + K LP+ F +
Sbjct: 283 IDAPKDGN---FKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNL-KIFKPSEE 338
Query: 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN 395
+ + I + S I + ++ +I+ K
Sbjct: 339 PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMF--------LINRKS----------- 379
Query: 396 PSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYH 455
+ K + ++ I+ N H +H
Sbjct: 380 --------------------YDLKRIDLSSKLGVVED---------WIVINKSHMDHPFH 410
Query: 456 MSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510
+ G F ++ + + R T V P + + D G+
Sbjct: 411 IHGTQFELIS------SKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLR 459
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 4e-31
Identities = 58/486 (11%), Positives = 113/486 (23%), Gaps = 100/486 (20%)
Query: 41 PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG 100
P ++ +G PGPT V VV N + +H G + DG
Sbjct: 52 PDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFS--RAAFDG--W 107
Query: 101 TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIIN--NRAIIPIPF 154
P Y + + + +Y G G +++ + +P
Sbjct: 108 AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPS 167
Query: 155 DTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYE 214
+ DI +++ + L T D + +NG+ +
Sbjct: 168 GYGEFDIPMILTSKQYTANGNLVTTNGELNSF-WGDVIHVNGQP--------------WP 212
Query: 215 TIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE--------GSYTVQQNYTSLDI 266
V + YR R + +S S + + + G + + L I
Sbjct: 213 FKNV-EPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYI 271
Query: 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326
+ + Y + A + L
Sbjct: 272 SMAERYEVVFDFSDYAGKTIELRN-------------------------------LGGSI 300
Query: 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRA 386
T N + +R+ V+ +P+ LR+ P
Sbjct: 301 GGIGTDTDYDNTDKVMRFVVADDTTQPDTS----------VVPANLRDVPFPSPTTNTPR 350
Query: 387 TLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQN 446
R + + G + + T L N
Sbjct: 351 QFRF---------GRTGPTWTINGV-AFADVQNRLLANVPVGTVER---------WELIN 391
Query: 447 NDTKM-HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL- 504
H H+ F V+ G + + + +
Sbjct: 392 AGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGL----KDVVWLGRRETVVVEAHYA 447
Query: 505 DNVGIW 510
G++
Sbjct: 448 PFPGVY 453
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 8e-29
Identities = 50/258 (19%), Positives = 92/258 (35%), Gaps = 35/258 (13%)
Query: 33 EVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS 92
E +YI A+ G + PTI + V + ++NKL E ++HW G
Sbjct: 19 EATYIEATASGY------MAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN-- 70
Query: 93 SWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRA 148
D + I P ++ Y F V ++ G++ Y P H Q G G I+ +
Sbjct: 71 WHNDA--HPSFAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSG 128
Query: 149 IIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVP 208
+ F D+ ++I D G + P + + N LV
Sbjct: 129 -SDLGFKYGVNDLPLVISDRR----------FIGGAPVYNPTPM--EMIAGFLGNAVLVN 175
Query: 209 DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHN-----LLLAETEGSYTVQ-QNYT 262
G+ ++ G +YR+R+ N + I N + L + + +
Sbjct: 176 -GVKDAVFKL-SGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVR 233
Query: 263 SLDIHVGQSYSFLVTMDQ 280
+L + + +V + +
Sbjct: 234 ALFLAPAERAEVVVELGE 251
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-26
Identities = 78/496 (15%), Positives = 152/496 (30%), Gaps = 62/496 (12%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ 89
+ ++ G NG GP + + V V++ N+L E +HW G++
Sbjct: 20 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 79
Query: 90 RRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFII- 144
DG G IPP + V + ++ P H Q A G G +I
Sbjct: 80 P--GEVDG--GPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 135
Query: 145 -NNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDG--VLINGKGPYQ 201
+ + +P D+ +++ D + LD G +L NG
Sbjct: 136 DDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNG----A 191
Query: 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN-HNLLLAETEGSYTVQ-Q 259
P R+R+ N + SLNF + L + ++G +
Sbjct: 192 IYPQHAA-----------PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPV 240
Query: 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKAR 319
+ L + +G+ + LV ++ N D + ++ + ++ A
Sbjct: 241 KVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQM-GMAIAPFDKPHPVMRIQPIAISAS 299
Query: 320 GPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEM 379
G LP+ + + ++R + + G ++
Sbjct: 300 GALPDTLSS--LPALPSLEGLTVRKLQLSMDPMLDMMGMQMLME-------KYGDQAMAG 350
Query: 380 IDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDF-PTKPVTGPPRMETSVINGTYRG 438
+D + G +N D+ F KP+ + +
Sbjct: 351 MDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWV----- 405
Query: 439 FMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT 498
I D +H +H+ G F ++ + + G W + T +V G +
Sbjct: 406 ----ISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAG----W----KDTVKV-EGNVS 452
Query: 499 AILVSL----DNVGIW 510
+LV +
Sbjct: 453 EVLVKFNHDAPKEHAY 468
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 110 bits (275), Expect = 5e-26
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 28/262 (10%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
G V ING++ GPTI V ++V + N+L E++ + +G+Q G G
Sbjct: 35 GTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQV--PGPLMG--GPA 90
Query: 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIPIPFDTPD 158
+ P +W ++ + +Y + Q +G G +++ + +P
Sbjct: 91 RMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHY 150
Query: 159 G--DITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETI 216
G D ++I D N G + D +L+NG +
Sbjct: 151 GVDDFPVIIQDKRLDNFGTPEYNEPGSGGF-VGDTLLVNGVQ--------------SPYV 195
Query: 217 EVHPGKTYRIRVHNVGISTSLNFRIQN-HNLLLAETEGSYTVQ-QNYTSLDIHVGQSYSF 274
EV G R+R+ N S ++ + L + + + + L + G+
Sbjct: 196 EVSRGW-VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREI 254
Query: 275 LVTMDQNASTDYYIVASARFVN 296
LV M +A V+
Sbjct: 255 LVDMSNGDEVSITCGEAASIVD 276
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 1e-22
Identities = 42/247 (17%), Positives = 78/247 (31%), Gaps = 30/247 (12%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL--IHWSGIQQRRSSWQDGLLG 100
GV + PG I V + + N+ N + I + G
Sbjct: 45 GVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGG 97
Query: 101 -TNCPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFIINNRAIIPIPFDT 156
+ P T+ F+ G + Y + A+G +G ++ +
Sbjct: 98 AESSFTAPGHTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE----GLAP 152
Query: 157 PDGDITILIGDWYTRNH--TALRKTLDAGKGL-GMPDGVLINGKGPYQYNTTLVPDGIDY 213
D + ++ GD+YT+ A + D K + D V+ NG D
Sbjct: 153 VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTT---------DE 203
Query: 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYS 273
++ G+T R+ + N G + +F + EG N + I G +
Sbjct: 204 NSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAI 263
Query: 274 FLVTMDQ 280
++
Sbjct: 264 VEFKVEV 270
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 2e-20
Identities = 49/244 (20%), Positives = 84/244 (34%), Gaps = 24/244 (9%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
GV + +G PG I V + V V N S + H + ++ Q G
Sbjct: 55 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNN-PSSTVPHN--VDFHAATGQGGGAAAT 111
Query: 103 CPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFIINNRAIIPIPFDTPDG 159
P T+ F+ Q G + Y + A+G +G ++ + D
Sbjct: 112 -FTAPGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE----GLPKVDK 165
Query: 160 DITILIGDWYTRNH--TALRKTLDAGKGLG-MPDGVLINGKGPYQYNTTLVPDGIDYETI 216
+ I+ GD+YT+ + D K + P+ V+ NG +
Sbjct: 166 EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGD---------NAL 216
Query: 217 EVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLV 276
+ G+T R+ V N G + +F + EG + +N S + G S
Sbjct: 217 KAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEF 276
Query: 277 TMDQ 280
+D
Sbjct: 277 KVDI 280
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 90.9 bits (225), Expect = 2e-19
Identities = 72/514 (14%), Positives = 137/514 (26%), Gaps = 114/514 (22%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL--------------------- 81
P ++ NG FPGPTI V N NV V N L +
Sbjct: 43 LPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKT 102
Query: 82 -IHWSGIQQRRSSWQDG------LLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH--- 131
+H G S DG P Y + + + +Y
Sbjct: 103 VVHLHGGVTPDDS--DGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALT 160
Query: 132 -FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDW-YTRNHTALRKTLDAGKGLGMP 189
+G G +II++ + + + D+ +LI D + + + +P
Sbjct: 161 RLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLP 220
Query: 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN-HNLLL 248
+ ++ + T LV +G + +EV + YR RV N + + N + N + +
Sbjct: 221 NPSIVPA---FCGETILV-NGKVWPYLEV-EPRKYRFRVINASNTRTYNLSLDNGGDFIQ 275
Query: 249 AETEGSYTVQ-QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVA 307
++G + S + + Y ++
Sbjct: 276 IGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESI--------------------- 314
Query: 308 ILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVT 367
IL + G P + +F V+ A+ +
Sbjct: 315 ILANSAGCGGDVNPETDANIMQFR--------------VTKPLAQKDE------------ 348
Query: 368 EVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427
++ P+ L+ V + + P +
Sbjct: 349 ------SRKPK--------YLASYPSVQHERIQNIRTLKLAGTQDEYGRPVLLLNNKRWH 394
Query: 428 ETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIA- 486
+ + N H H+ +F V+ + + G A
Sbjct: 395 DPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAV 454
Query: 487 ---------RTTTQVYPGAWTAILVSL-DNVGIW 510
+ T Q + G I + G +
Sbjct: 455 PPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY 488
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 90.4 bits (223), Expect = 5e-19
Identities = 33/254 (12%), Positives = 75/254 (29%), Gaps = 32/254 (12%)
Query: 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGT 101
+ V ++ + GP ++ + V + +N IH G+Q T
Sbjct: 794 VPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTES--------ST 845
Query: 102 NCPIPPKWNWTYQFQVKDQ---------VGSFFYFPSLHF--QRASGGFGGFIINNRAII 150
P P TY +++ ++ + Y+ ++ SG G I+ R +
Sbjct: 846 VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL 905
Query: 151 PIPFDTPDGDITILIGDWYTRN----HTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL 206
+ + +L + ++ D + + D I + N +
Sbjct: 906 KVFNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRM 965
Query: 207 VPDGIDYETIEVHPGKTYRIRVHNVGISTSLN-FRIQNHNLLLAETEGSYTVQQNYTSLD 265
+ + + +H G + +G L+ H+ + D
Sbjct: 966 FG---NLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSS-----DVFD 1017
Query: 266 IHVGQSYSFLVTMD 279
I G + +
Sbjct: 1018 IFPGTYQTLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 85.4 bits (210), Expect = 2e-17
Identities = 30/257 (11%), Positives = 62/257 (24%), Gaps = 49/257 (19%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS----WQDGLLG---TNCPIPP 107
F GP I T + V V+++N H GI + + D + + P
Sbjct: 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 151
Query: 108 KWNWTYQFQVKDQ---------VGSFFYFP--SLHFQRASGGFGGFIINNR-AIIPIPFD 155
+TY ++ + Y ASG G II + ++
Sbjct: 152 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEK 211
Query: 156 TPDGDITILIGDWYTRNHTAL------------RKTLDAGKGLGMPDGVLINGKGPYQYN 203
D + ++ L + D +NG
Sbjct: 212 HIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFG--- 268
Query: 204 TTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS 263
+ + + + +G + H L +
Sbjct: 269 --------SLSGLSMCAEDRVKWYLFGMG-NEVDVHAAFFHGQALTNK------NYRIDT 313
Query: 264 LDIHVGQSYSFLVTMDQ 280
+++ + +
Sbjct: 314 INLFPATLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 65.0 bits (157), Expect = 4e-11
Identities = 33/262 (12%), Positives = 75/262 (28%), Gaps = 34/262 (12%)
Query: 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS----------- 93
+ + GP I + + V NK L I G++ +++
Sbjct: 438 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNP 497
Query: 94 WQDGLLGTNCPIPPKWNWTYQFQVKDQVG---------SFFYFPSLHFQR--ASGGFGGF 142
+ + + P +TY++ V +VG + Y+ ++ + +G G
Sbjct: 498 QSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPM 557
Query: 143 IINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQY 202
I + + D D + + +L + PD V + +
Sbjct: 558 KICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQES 617
Query: 203 NTTLVPDGIDYE---TIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQ 258
N +G Y + + G + + + G + L
Sbjct: 618 NKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRD---- 673
Query: 259 QNYTSLDIHVGQSYSFLVTMDQ 280
+ ++ S + + D
Sbjct: 674 ----TANLFPQTSLTLHMWPDT 691
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 1e-18
Identities = 41/248 (16%), Positives = 80/248 (32%), Gaps = 30/248 (12%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL--IHWSGIQQRRSSWQDGLLG 100
NGK PGP + V + V ++++N D ++ + + G G
Sbjct: 180 NTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234
Query: 101 TNCPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFIINNRAIIPIPFDTP 157
P F+ G + Y PS+ +G +G ++
Sbjct: 235 FT-QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEG----GLPQV 288
Query: 158 DGDITILIGDWYTRNH--TALRKTLDAGKGL-GMPDGVLINGKGPYQYNTTLVPDGIDYE 214
D + ++ G+ YT T+ + +D K + P+ L NG +
Sbjct: 289 DREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGS-VGSLTRS--------H 339
Query: 215 TIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS--LDIHVGQSY 272
+ G+T RI G + + +F + + GS + + G +
Sbjct: 340 PLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGAT 399
Query: 273 SFLVTMDQ 280
+D+
Sbjct: 400 IVDFKIDR 407
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 39/202 (19%), Positives = 59/202 (29%), Gaps = 24/202 (11%)
Query: 33 EVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS 92
+ A V V PT+ V V VN+ N H +
Sbjct: 30 TLRTGIAEGRMVYIGVGGDIDHKINPTLVVHEGETVQVNLVNGEGAQ---HDVVV----- 81
Query: 93 SWQDGLLGTNCPIPPKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINNRAIIP 151
D + I N + F +VG F Y+ S+ R +G G +
Sbjct: 82 ---DQYAARS-AIVNGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAE 137
Query: 152 IPFDTPD--GDITILIGDWYTRNHTALRKTLDAG-KGLGMPDGVLINGKGPYQYNTTLVP 208
+ D D L G R +R L+ + D + +N VP
Sbjct: 138 MKSSGADITRDPADLPGPIGPRQAKTVRIDLETVEVKGQLDDNTTYTY---WTFNGK-VP 193
Query: 209 DGIDYETIEVHPGKTYRIRVHN 230
G + V G T + + N
Sbjct: 194 -G---PFLRVRVGDTVELHLKN 211
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 78.5 bits (193), Expect = 3e-16
Identities = 36/273 (13%), Positives = 63/273 (23%), Gaps = 64/273 (23%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGI 87
++ + + PGP I V + + + N +D +H G+
Sbjct: 6 EVRHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGL 65
Query: 88 QQRRSSWQDGLLGTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLHFQR- 134
SS DG + P TY ++ G + Y +
Sbjct: 66 DYEISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEH 123
Query: 135 -----ASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMP 189
+G +G I+ + + PD TI+ D N
Sbjct: 124 GTGGIRNGLYGPVIVRRKGDVL-----PDATHTIVFNDMTINN----------------- 161
Query: 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249
E G I + G F + H
Sbjct: 162 ------------------RKPHTGPDFEATVGDRVEIVMITHGEYYH-TFHMHGHRWADN 202
Query: 250 ETEGSYT---VQQNYTSLDIHVGQSYSFLVTMD 279
T + + S+ F +
Sbjct: 203 RTGILTGPDDPSRVIDNKITGPADSFGFQIIAG 235
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 78.6 bits (193), Expect = 6e-16
Identities = 36/271 (13%), Positives = 63/271 (23%), Gaps = 64/271 (23%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ 89
++ + + PGP I V + + + N +D +H G+
Sbjct: 49 RHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDY 108
Query: 90 RRSSWQDGLLGTNCPIPPKWNWTYQFQVKD------------QVGSFFYFPSLHFQR--- 134
SS DG + P TY ++ G + Y +
Sbjct: 109 EISS--DGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGT 166
Query: 135 ---ASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDG 191
+G +G I+ + + PD TI+ D N
Sbjct: 167 GGIRNGLYGPVIVRRKGDVL-----PDATHTIVFNDMTINN------------------- 202
Query: 192 VLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET 251
E G I + G F + H T
Sbjct: 203 ----------------RKPHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGHRWADNRT 245
Query: 252 EGSYT---VQQNYTSLDIHVGQSYSFLVTMD 279
+ + S+ F +
Sbjct: 246 GILTGPDDPSRVIDNKITGPADSFGFQIIAG 276
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 74.0 bits (181), Expect = 1e-14
Identities = 33/241 (13%), Positives = 71/241 (29%), Gaps = 47/241 (19%)
Query: 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGI 87
VY ++E + P GPT+ + + V+ +NK + L IH GI
Sbjct: 37 VYREYEAYFQKEKPQSRTSG-------LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGI 89
Query: 88 QQRRSS----WQDGLLG---TNCPIPPKWNWTYQFQVKDQVGS---------FFYFP--S 129
+ + S + D L + + P +TY++ + + G Y+ +
Sbjct: 90 KYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVN 149
Query: 130 LHFQRASGGFGGFIINNRAIIPIPFDTP--DGDITILIGDW---------YTRNHTALRK 178
L SG G +I + + + ++ + + +T
Sbjct: 150 LVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGY 209
Query: 179 TLDAGKGLGMPDG-----VLINGKGPYQYNT------TLVPDGIDYETIEVHPGKTYRIR 227
+ + LI + + L + I + +
Sbjct: 210 VNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTAN 269
Query: 228 V 228
+
Sbjct: 270 M 270
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 70.1 bits (170), Expect = 9e-13
Identities = 31/244 (12%), Positives = 72/244 (29%), Gaps = 27/244 (11%)
Query: 56 PGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS----WQDGLLG-TNCPIPPKWN 110
GP + + +++ +N+ I+ GI R G+ + PI P
Sbjct: 450 LGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEI 509
Query: 111 WTYQFQVKDQVG---------SFFYFP--SLHFQRASGGFGGFIINNRAIIPIPFD--TP 157
+ Y++ V + G + +Y ++ ASG G +I + + +
Sbjct: 510 FKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMS 569
Query: 158 DGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIE 217
D IL + L + + + ++ D +
Sbjct: 570 DKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLS 629
Query: 218 VHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLV 276
V + + ++G T L+ + +L + + +
Sbjct: 630 VCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVY--------EDTLTLFPFSGETVFM 681
Query: 277 TMDQ 280
+M+
Sbjct: 682 SMEN 685
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 68.1 bits (165), Expect = 4e-12
Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 44/251 (17%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS----WQDGLLGTN---CPIPP 107
GPTI + VV+ ++N + +H G+ ++S + D + P
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFP 131
Query: 108 KWNWTYQFQVKDQVG---------SFFYFP--SLHFQRASGGFGGFIINNRAIIPIPFDT 156
+ TY +QV + G ++ Y L SG G ++ +
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQ 191
Query: 157 PDGDITILIG------DWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDG 210
+L W++ +L + DA P +NG
Sbjct: 192 TLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNR---------- 241
Query: 211 IDYETIEVHPGKTYRIRVHNVGISTSLN-FRIQNHNLLLAETEGSYTVQQNYTSLDIHVG 269
+ K+ V +G + ++ ++ H L+ SL+I
Sbjct: 242 -SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQ--------ASLEISPI 292
Query: 270 QSYSFLVTMDQ 280
+ +
Sbjct: 293 TFLTAQTLLMD 303
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 3e-10
Identities = 46/261 (17%), Positives = 78/261 (29%), Gaps = 42/261 (16%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
G + NG PGP + V N+ V + + N I + L G
Sbjct: 56 GTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTN---TLLHNI--DFHAATGALGGGA 110
Query: 103 -CPIPPKWNWTYQFQVKDQVGSFFY----FPSLHFQRASGGFGGFIINNRAIIPIPFDTP 157
+ P T +F+ + G F Y + + SG G ++ R + P
Sbjct: 111 LTQVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQP 169
Query: 158 ---DGDITILIGDWYTR------------NHTALRKTLDAGKGLGMPDGVLINGK-GPYQ 201
D + D+Y A + A + L P ++ NG G
Sbjct: 170 LTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTL-TPTHIVFNGAVGALT 228
Query: 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV--QQ 259
+ L G+ + VH+ + I H + T G +
Sbjct: 229 GDHAL----------TAAVGERVLV-VHSQANRDTRPHLIGGHGDYVWAT-GKFRNPPDL 276
Query: 260 NYTSLDIHVGQSYSFLVTMDQ 280
+ + I G + + T Q
Sbjct: 277 DQETWLIPGGTAGAAFYTFRQ 297
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 6e-09
Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 38/215 (17%)
Query: 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS-------WQD 96
PQ + GP I ++ + V +N +H G+ +SS
Sbjct: 55 DPQGEYEEHLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSP 114
Query: 97 GLLGTNCPIPPKWNWTYQFQVKDQVGS---------FFYFPSLH--FQRASGGFGGFIIN 145
+ I P +TY + + G + Y+ +++ SG G +I
Sbjct: 115 EWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLIC 174
Query: 146 NRAIIPIPFDTPDGD--------ITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGK 197
+ + + P + WY + + + ING
Sbjct: 175 RKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAING- 233
Query: 198 GPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVG 232
YN + ++ + R+ + N+G
Sbjct: 234 --MIYNL---------PGLRMYEQEWVRLHLLNLG 257
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 46/260 (17%), Positives = 78/260 (30%), Gaps = 40/260 (15%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
G Q + NG PGPT+ V + V + + N + L G
Sbjct: 50 GTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN---AMPHNV--DFHGATGALGGAK 104
Query: 103 CP-IPPKWNWTYQFQVKDQVGSFFY----FPSLHFQRASGGFGGFIINNRAIIPIPFDTP 157
+ P T +F+ + G+F Y + + SG G ++ R + P P
Sbjct: 105 LTNVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 158 ---DGDITILIGDWYTRNHT------------ALRKTLDAGKGLGMPDGVLINGKGPYQY 202
D TI D Y + T+ + L P ++ NGK
Sbjct: 164 LHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTL-TPSHIVFNGK-VGAL 221
Query: 203 NTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV--QQN 260
+ G+T + T + + G + Q++
Sbjct: 222 TGA--------NALTAKVGETVLLIHSQANRDTR--PHLIGGHGDWVWETGKFANPPQRD 271
Query: 261 YTSLDIHVGQSYSFLVTMDQ 280
+ I G + + L T Q
Sbjct: 272 LETWFIRGGSAGAALYTFKQ 291
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 9e-06
Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 39/260 (15%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
Q + +G PGP + V + V + + N E+ + H + G L
Sbjct: 49 DAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP-PENTMPHNIDFHAATGALGGGGLT-- 105
Query: 103 CPIPPKWNWTYQFQVKDQVGSFFY-----FPSLHFQRASGGFGGFIINNRAIIPIPFDTP 157
I P +F+ + G+F Y P + + SG G ++ R + P
Sbjct: 106 -LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKP 163
Query: 158 -DGDITILIGDW--------------YTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQY 202
D IG+ ++ + L +P ++ NG
Sbjct: 164 VRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTL-IPSHIVFNGA-VGAL 221
Query: 203 NTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT--VQQN 260
++ G VH+ S + + L G + +++
Sbjct: 222 T--------GEGALKAKVGDNVLF-VHSQPNRDS-RPHLIGGHGDLVWETGKFHNAPERD 271
Query: 261 YTSLDIHVGQSYSFLVTMDQ 280
+ I G + + L Q
Sbjct: 272 LETWFIRGGTAGAALYKFLQ 291
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 2e-05
Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 12/115 (10%)
Query: 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQ 116
GP I +N++V RN+ + S I Q N + P TY ++
Sbjct: 198 GPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQRQGAEPRKN-FVKPNETKTYFWK 256
Query: 117 VKDQVG---------SFFYFPSLHFQR--ASGGFGGFIINNRAIIPIPFDTPDGD 160
V+ + ++ Y + ++ SG G ++ + +
Sbjct: 257 VQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTV 311
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 8e-05
Identities = 47/416 (11%), Positives = 104/416 (25%), Gaps = 136/416 (32%)
Query: 1 MALCRGLSLLAIHIALLASLCSAADLFVYFDFEVSYITASPLGVPQQVIAINGKF----- 55
+ G + +A +C + + DF++ ++ P+ V+ + K
Sbjct: 158 VLGS-GKTWVA------LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 56 ------PGPTINVTTNNNVVVNVRNKL------DESLLI--------HWSG--------I 87
+ N+ + + +L + LL+ W+ +
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL 270
Query: 88 QQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147
R D L T + + ++ + R
Sbjct: 271 TTRFKQVTDFLSAAT---------TTHISLDHHSMTLTPDEVKSL------LLKYL-DCR 314
Query: 148 AIIPIPFDTPDGDITI------LIGD-----------WYTRNHTALRKTLDAG------- 183
P D P +T +I + W N L +++
Sbjct: 315 -----PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 184 ------KGLGM-PDGVLINGKGPYQYNTTLVPDGIDYETIEV------------HPGKTY 224
L + P I P + + D I + + V P K
Sbjct: 370 EYRKMFDRLSVFPPSAHI----PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP-KES 424
Query: 225 RIRVHNVGISTSLNFRIQN----HNLLLAETEGSYTVQQNYTSLDIHV----GQSYSFLV 276
I + I L +++N H ++ Y + + + S D+ YS +
Sbjct: 425 TISIP--SIYLELKVKLENEYALHRSIVD----HYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 277 T-MDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFD 331
+ + + F++ + K + +
Sbjct: 479 HHLKNIEHPERMTLFRMVFLD------------FRFLEQKIRHDSTAWNASGSILN 522
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 591 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.95 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.95 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.94 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.94 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.93 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.92 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.92 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.86 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.84 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.82 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.82 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.81 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.77 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.71 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.7 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.62 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.6 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.58 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.48 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.48 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.42 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.41 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.36 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.35 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.34 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.31 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.3 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.29 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.28 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.26 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.25 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.22 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.15 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.15 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.13 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.07 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.05 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.02 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.96 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.89 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 98.82 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.77 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.73 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.7 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.68 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.63 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.61 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.6 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.59 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.56 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.55 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.54 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.52 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.5 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.49 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.47 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.45 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.44 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.43 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.41 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.32 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.29 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.26 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.25 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.23 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.2 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.19 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.07 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.02 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.0 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 97.93 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.9 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.88 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.86 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.84 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.84 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.82 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.74 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.52 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.17 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.16 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 97.09 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 97.06 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.03 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 96.97 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 96.9 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 96.51 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.08 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.03 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 95.97 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 95.85 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.37 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 95.08 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 95.01 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 94.67 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 93.98 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 92.45 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 92.1 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 92.07 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 91.81 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-101 Score=856.21 Aligned_cols=506 Identities=30% Similarity=0.530 Sum_probs=401.5
Q ss_pred ceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+|+|+|+|++..+++||.++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++++++|+||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5799999999999999999999999999999999999999999999999998 99999999999999999999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcC
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 183 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 183 (591)
+|+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++....|+ ..|+|++|+|+||++++...+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 799999999999999999999999999986555565 3468999999999998776654433322
Q ss_pred --CCCCCCceEEEcCcCCCCCCC-----------ccC-CCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE
Q 007735 184 --KGLGMPDGVLINGKGPYQYNT-----------TLV-PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (591)
Q Consensus 184 --~~~~~~~~~lING~~~~~~~~-----------~~~-~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 249 (591)
...+.++.++|||+..++|.. +.. ...+..+.++|++||+|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 223467899999999876632 111 112234589999999999999999999999999999999999
Q ss_pred eecCCceeeeeeeEEEEccccEEEEEEEeC-CCCCcceEEEEeecccccccCCCcceEEEEEecCCCCC--CCCCCCCCC
Q 007735 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTMD-QNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGK--ARGPLPEGP 326 (591)
Q Consensus 250 a~DG~~~~p~~~d~v~i~pGqR~dvlv~~~-~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~p~~p 326 (591)
|+||.+++|+.++++.|+|||||||+|+++ +++| +|||++....+. ..+....|+|+|.++... +..+.|..|
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~---~~~~~~~ail~y~~~~~~~~p~~~~p~~p 315 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARH---PNTPPGLTLLNYLPNSVSKLPTSPPPQTP 315 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSC---CCSCCEEEEEEETTSCTTSCCSSCCCCCC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCC---CCCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999994 4567 999999876422 123567899999876421 111222222
Q ss_pred CCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccc
Q 007735 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~ 406 (591)
... +....... .+. .+....+.+.+ ..+++++.+..... ..++..+|+|||++|..|+.|+|.+.+.
T Consensus 316 ~~~-~~~~~~~~--~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~ 382 (552)
T 1aoz_A 316 AWD-DFDRSKNF--TYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKY 382 (552)
T ss_dssp CTT-CHHHHHHH--HTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHT
T ss_pred ccc-cccccccc--ccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhh
Confidence 110 11100000 000 01100011111 23567777665321 2345678999999999999999988777
Q ss_pred cccccccCCCCCCC-----------CCCCCCcceEEEeccCCcEEEEEEecCCC------cceeeeecCceEEEEEEcCC
Q 007735 407 KVKGAYKLDFPTKP-----------VTGPPRMETSVINGTYRGFMEVILQNNDT------KMHAYHMSGYAFFVVGMDYG 469 (591)
Q Consensus 407 ~~~g~~~~~~~~~p-----------~~~~~~~~~~v~~~~~g~~ve~vl~N~~~------~~HPfHlHG~~F~Vv~~g~g 469 (591)
++++.|..+++..+ .+...+.++.++.++.|++|||+|+|.+. +.||||||||+||||+++.|
T Consensus 383 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G 462 (552)
T 1aoz_A 383 NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDG 462 (552)
T ss_dssp TCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEES
T ss_pred cCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccC
Confidence 66776664433221 11233456788899999999999999873 46999999999999999989
Q ss_pred CCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCccc
Q 007735 470 EWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALF 549 (591)
Q Consensus 470 ~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~ 549 (591)
.|++.....||+.+|+|||||.|+|+||++|||++||||.|+|||||++|++.|||+.|.|... + ..++|++++.
T Consensus 463 ~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~~ 537 (552)
T 1aoz_A 463 KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALA 537 (552)
T ss_dssp SCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHS
T ss_pred ccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchhh
Confidence 8876445579999999999999999999999999999999999999999999999999987533 2 3568999999
Q ss_pred ccCcCC
Q 007735 550 CGALSH 555 (591)
Q Consensus 550 c~~~~~ 555 (591)
|+.+..
T Consensus 538 C~~~~~ 543 (552)
T 1aoz_A 538 CGGTAK 543 (552)
T ss_dssp SHHHHH
T ss_pred hhccCc
Confidence 998764
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-99 Score=831.47 Aligned_cols=488 Identities=23% Similarity=0.329 Sum_probs=384.0
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
..+++|+|+|++.+++|||+++++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|++++||||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 45799999999999999999999999999999999999999999999999998 89999999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcc-eEEecccccCchHHHHHHhh
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~-~l~l~d~~~~~~~~~~~~~~ 181 (591)
|||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+ +|.|. +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~---yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--AD---YDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CC---CCccceEEEEEEEecCCHHHHHHHHh
Confidence 999999999999999 5999999999999999999999999998754 23 48887 99999999998877654443
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCc---cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee
Q 007735 182 AGKGLGMPDGVLINGKGPYQYNTT---LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 182 ~~~~~~~~~~~lING~~~~~~~~~---~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 258 (591)
.+ ..+.++++||||++.++|... .+......+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 219 ~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 LG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp TS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred cc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 32 246789999999998777421 11123456899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccc
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQ 338 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 338 (591)
+.+++|.|+|||||||+|+++++++ +|||++.....+.....+....|||+|.++... .|..+...+. ..+.+.
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~-~~~~~~ 371 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPR-GTCEDE 371 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCC-CCSCCS
T ss_pred eEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCcc-chhhcc
Confidence 9999999999999999999998888 999999876533211234578999999865421 1111110000 001111
Q ss_pred ccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeecc-CCCCchhhhccccccccccCCCC
Q 007735 339 ARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFV-NPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 339 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~-~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
...+|.+..+.+.|. ..+.+.++.+. .++..+|+|||++|. +++.|+|++.+. |. .++
T Consensus 372 ---~~~~L~P~~~~~~~~------~~~~~~~l~~~------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~- 430 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG------YSLVDEQVSSA------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF- 430 (580)
T ss_dssp ---CGGGCCBSSCCBCCS------EEEEEEEEEEE------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC-
T ss_pred ---cccccccCCCCCCCC------ccceEEEEEec------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccC-
Confidence 001233222222221 12233333331 345678999999997 578898876542 21 011
Q ss_pred CCCCCCCCCcceEEEecc----CCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCC-CCCCCCCCCCccceE
Q 007735 418 TKPVTGPPRMETSVINGT----YRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNS-RGTYNKWDGIARTTT 490 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~----~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~-~~~~n~~~p~~rDTv 490 (591)
|. ..+++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|++.. +..||+.||++|||+
T Consensus 431 --~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 431 --PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp --CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred --CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 11 23444554 6999999999987 789999999999999999999998653 467999999999999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCc-ccccCcCCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNA-LFCGALSHL 556 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~-~~c~~~~~~ 556 (591)
.|+|+||++|||++||||+|+|||||++|++.||+..|.+ .+++..+ ..++|+.. ..|..|...
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i~~-~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSIAV-KMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGCCC-CHHHHHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHHhh-ccCCcHHHHHhhHHHhhh
Confidence 9999999999999999999999999999999999999876 4444332 22356654 578777553
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-97 Score=817.05 Aligned_cols=484 Identities=21% Similarity=0.316 Sum_probs=379.4
Q ss_pred ceEEEEEEEEEEEecCCC-eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 26 LFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
.+++|+|+|++.+++||| .++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|++++||||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 378999999999999999 8999999999999999999999999999999999 99999999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh-h
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL-D 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~-~ 181 (591)
|+|+||++|+|+|++++|+||||||||.+.|+.+||+|+|||++++. |+ .+|+|++|+|+||+++...++...+ .
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976999999999999999999999999999753 44 4589999999999999887765432 2
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee
Q 007735 182 A---GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 182 ~---~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 258 (591)
. ....+.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 1 22345789999999986 899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeeccccc---ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccc
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE---SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 335 (591)
..++++.|+|||||||+|++++.++++|||++....... ....+....++|+|.++... |..+... .....
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~-~~~~~ 296 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVD-SIDNF 296 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCS-CSSCS
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccc-ccccc
Confidence 999999999999999999998754349999997653211 11134567899999875421 1111000 00000
Q ss_pred cccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCC
Q 007735 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD 415 (591)
Q Consensus 336 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~ 415 (591)
+++ ..+.+....+.+ ..+++++.+........++..+|+|||++|..|+.|+|+..+. .+.+.
T Consensus 297 ~~~-----~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~-- 359 (534)
T 1zpu_A 297 LDD-----FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQA-- 359 (534)
T ss_dssp CCG-----GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGT--
T ss_pred ccc-----ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCccc--
Confidence 111 011111111111 2345666665432212456678999999999999998876542 12221
Q ss_pred CCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCC----------CCCCCCCCCCCCCCCC
Q 007735 416 FPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYG----------EWTDNSRGTYNKWDGI 485 (591)
Q Consensus 416 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g----------~~~~~~~~~~n~~~p~ 485 (591)
..+... ..+++++.++.|++|||+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|+
T Consensus 360 --~~~~~~--~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~ 434 (534)
T 1zpu_A 360 --NNSEIY--GSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPM 434 (534)
T ss_dssp --TCGGGG--CSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCE
T ss_pred --CCCccc--CCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCC
Confidence 111111 11356788999999999999999899999999999999999864 4443322223 56899
Q ss_pred ccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCC--CCCCCCcccccCcCCCC
Q 007735 486 ARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTE--FPIPDNALFCGALSHLQ 557 (591)
Q Consensus 486 ~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~--~~~p~~~~~c~~~~~~~ 557 (591)
|||||.|+|++|++|||++||||.|+|||||++|++.|||..|.+. +++.. ++ .++|++...||...+.+
T Consensus 435 ~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~~~-~~~~~~~p~~~~~~C~~~~~~ 506 (534)
T 1zpu_A 435 RRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFGIQ-DAHSQQLSENHLEVCQSCSVA 506 (534)
T ss_dssp EESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHHH-HCGGGSCCHHHHHHHHHTTCC
T ss_pred eeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-ccccc-cccccCCChhHhhhhhccCCC
Confidence 9999999999999999999999999999999999999999999775 33222 22 56787776666555543
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-96 Score=800.92 Aligned_cols=479 Identities=26% Similarity=0.405 Sum_probs=371.6
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-----CceeeecCccCCCCCCCCCCCC-C
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
..|+|+|++..++|||+++++|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
||+|+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++|||++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999889999999999999999999999999987542 1234444567899999999985432
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (591)
.+.....++++||||++.+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSD-----SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTC-----TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCC-----CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 1223347899999999876652 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
+++|.|+|||||||+|++++++| +|||++........ ..+....|||+|.++.... |....+. ... .+.+
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~---~~~-~~~~-- 302 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVE--PTTNQTT---SVK-PLNE-- 302 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCC---CSS-BCCG--
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCC--CCCCCCC---CCc-cccc--
Confidence 99999999999999999998878 99999987533221 1223457999998764211 1000000 000 0111
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 420 (591)
.+|.+....+.|... ....+++++.+... .++ .+|+|||++|..|+.|+|++.+. +.+...
T Consensus 303 ---~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----- 363 (499)
T 3pxl_A 303 ---VDLHPLVSTPVPGAP---SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ----- 363 (499)
T ss_dssp ---GGCCBSSCCCCSSCS---STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT-----
T ss_pred ---ccccccccccCCCcc---cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhhc---CCcccc-----
Confidence 122222111111100 01134566655542 222 37999999999999998876542 222110
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEe---cCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCC---
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQ---NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP--- 494 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~---N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp--- 494 (591)
......+++.++.|++|||+|+ |.+.+.||||||||+||||++++ ...+|+.+|+||||+.|++
T Consensus 364 ---~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~p 433 (499)
T 3pxl_A 364 ---DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAA 433 (499)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGG
T ss_pred ---ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCC
Confidence 0011346788999999999999 56678999999999999998742 2358999999999999997
Q ss_pred CcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCC-cccccCcCCCCC
Q 007735 495 GAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDN-ALFCGALSHLQK 558 (591)
Q Consensus 495 ~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~~~~~ 558 (591)
|+|++|||++||||.|+|||||++|++.||++.+ ++.|++..+. .++|+. ...|..|...+.
T Consensus 434 g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~-~~~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 434 GDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVKAV-NPVPQAWSDLCPTYDALDP 496 (499)
T ss_dssp TCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHHHH-SCCCHHHHTHHHHHHTSCG
T ss_pred CcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHhccc-cCCCHHHHHhhhHhhccCc
Confidence 9999999999999999999999999999999888 5666654322 345655 468888876543
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-96 Score=800.81 Aligned_cols=478 Identities=24% Similarity=0.358 Sum_probs=368.5
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-----CceeeecCccCCCCCCCCCCCC-C
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
..|+|+|++.+++|||+++++|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++|||++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999889999999999999999999999999987542 12344445678999999999865432
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (591)
.+.....+|++||||++.+.|.. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12223478999999998765522 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
++++.|+|||||||+|++++++| +|||++........ ..+....|||+|.++.... |....+.. ... .+.+
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~~--~~~-~~~~-- 306 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTVASTV--HTK-CLIE-- 306 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCSS--CSS-BCCG--
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCCCCCC--Ccc-cccc--
Confidence 99999999999999999998878 99999987543221 1223457999998754211 11111110 000 0111
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 420 (591)
.+|.+....+.|... . ...+++++.+... .++ .+|+|||++|..|+.|+|++.+. +.+...
T Consensus 307 ---~~L~p~~~~~~p~~~-~--~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----- 367 (495)
T 3t6v_A 307 ---TDLHPLSRNGVPGNP-H--QGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQICS---GANTAA----- 367 (495)
T ss_dssp ---GGCCBSSCCCCSSCS-S--TTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST-----
T ss_pred ---ccccccccccCCCcc-C--CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc-----
Confidence 122222111111100 0 1124555555432 122 27999999999999998876542 222110
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEe-cCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCC-CcEE
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQ-NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP-GAWT 498 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~-N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp-~g~~ 498 (591)
......+++.++.|++|||+|+ |.+.+.||||||||+|+||++++ ...+|+.+|+||||+.|++ |+|+
T Consensus 368 ---~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~P~~rDtv~v~~~g~~~ 437 (495)
T 3t6v_A 368 ---DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESAS-------NSTSNYDDPIWRDVVSIGGVGDNV 437 (495)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCSTTCEE
T ss_pred ---cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCC-------CCCcccCCCCCccEEEcCCCCcEE
Confidence 0011345788999999999998 66778999999999999998742 2358999999999999997 8999
Q ss_pred EEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCc-ccccCcC
Q 007735 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNA-LFCGALS 554 (591)
Q Consensus 499 ~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~-~~c~~~~ 554 (591)
+|||++||||.|+|||||++|++.||++.+ ++.|++..+ ..++|+.. ..|..|.
T Consensus 438 ~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~-~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 438 TIRFCTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNTAS-ANPVPEAWSNLCPSYD 492 (495)
T ss_dssp EEEEECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHHHH-HCCCCHHHHHHHHHHH
T ss_pred EEEEEcCCCeeEEEEecchhHhhcCCeEEE-EEChhHhcc-ccCCCHHHHHHhhHhh
Confidence 999999999999999999999999999888 455554432 23456664 5776553
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-96 Score=803.80 Aligned_cols=485 Identities=23% Similarity=0.322 Sum_probs=373.1
Q ss_pred CCceEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDG 97 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DG 97 (591)
++...+|+|++++.++++||+ ++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++++++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 344578999999999999999 999999999999999999999999999999999 99999999999998999999
Q ss_pred CCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHH
Q 007735 98 LLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 98 v~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+++ |||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 998 99999999999999997789999999999999999999999999987532 2234434579999999999997766
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCc
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 255 (591)
+.. ..+...+.+|.++|||+..+.|.. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 542 222334568999999999866531 12345899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccc
Q 007735 256 TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335 (591)
Q Consensus 256 ~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 335 (591)
++|+.++++.|+|||||||+|++++++| +|||++........ .......++|+|.++.... |.+..+.. ..
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~--p~~~~~~~-----~~ 324 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE--PTTSQNSG-----TA 324 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC--CCCCCCCS-----CB
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCC--CCCCCCcc-----cc
Confidence 9999999999999999999999998778 99999987542211 1112346999998764211 11100000 00
Q ss_pred cccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCe-eEEEEcCeeccCCCCchhhhccccccccccC
Q 007735 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGK-RRATLSGISFVNPSTPIRLADWFKVKGAYKL 414 (591)
Q Consensus 336 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~ 414 (591)
+++ .++.+....+.|.... ....++++.+... .++. .+|+|||++|..+..|++++.+. +.+..
T Consensus 325 ~~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~ 389 (521)
T 1v10_A 325 LNE-----ANLIPLINPGAPGNPV---PGGADINLNLRIG----RNATTADFTINGAPFIPPTVPVLLQILS---GVTNP 389 (521)
T ss_dssp CCG-----GGCCBSSCCCCSSCSS---TTCSSEEEECCEE----CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG
T ss_pred cch-----hhcccCCcccCCCccc---CCcceEEEEEEEe----cCCceeEEEECCCcccCCCCchhhhhhc---CCccc
Confidence 111 1122211111221110 0123455554431 1232 47999999999888898766542 22110
Q ss_pred CCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEe-C
Q 007735 415 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV-Y 493 (591)
Q Consensus 415 ~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V-p 493 (591)
. ..+.+++++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| +
T Consensus 390 ~--------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p 452 (521)
T 1v10_A 390 N--------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGG 452 (521)
T ss_dssp G--------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCB
T ss_pred c--------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCC
Confidence 0 01124567889999999999999 7899999999999999997652 478899999999999 8
Q ss_pred CCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCC-CcccccCcCCCC
Q 007735 494 PGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPD-NALFCGALSHLQ 557 (591)
Q Consensus 494 p~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~~~ 557 (591)
|++|++|||++||||.|+|||||++|++.|||..+.|...+ .. +..++|+ +...|..|....
T Consensus 453 ~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~-~~-~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 453 GGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN-IP-IANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG-HH-HHSCCCHHHHTHHHHHTTCC
T ss_pred CCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc-hh-hccCCChHHhhhchhhhccC
Confidence 99999999999999999999999999999999999885443 21 2344564 578999987754
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-94 Score=783.72 Aligned_cols=476 Identities=26% Similarity=0.400 Sum_probs=369.5
Q ss_pred EEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 29 ~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
.|+|++++..+++||+++++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++++++++||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999998999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHhh
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~ 181 (591)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997789999999999999999999999999987532 2334333479999999999987665321
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeee
Q 007735 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNY 261 (591)
Q Consensus 182 ~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 261 (591)
.+.++.++|||+..+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|+.+
T Consensus 162 ----~~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGG-----PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTC-----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCC-----CCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 146899999999986652 12345899999999999999999999999999999999999999999999999
Q ss_pred eEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCC-CCCCCcCcccccc
Q 007735 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPE-GPNDEFDKTFSMN 337 (591)
Q Consensus 262 d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~-~p~~~~~~~~~~~ 337 (591)
+++.|+|||||||+|++++++| +|||++........ ........++|+|.++.... |... .|.. ..++
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--p~~~~~~~~-----~~l~ 304 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD--PTTSANPNP-----AQLN 304 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC--CCCCCCSSC-----CBCC
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCC--CCCCCCCcc-----CCCc
Confidence 9999999999999999998778 89999986532211 01122346999998764211 1110 1110 0111
Q ss_pred cccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCC
Q 007735 338 QARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 338 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
. .++.+....+.|.... ....++++.+... .++. .|+|||++|..+..|++++.+. +.+...
T Consensus 305 ~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~-- 366 (503)
T 1hfu_A 305 E-----ADLHALIDPAAPGIPT---PGAADVNLRFQLG----FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN-- 366 (503)
T ss_dssp G-----GGCBBSSSCSCSSCSS---TTCSSEEEECCEE----EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG--
T ss_pred c-----ccccccCccCCCCccc---CCcceEEEEEEee----ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc--
Confidence 1 1122211111221110 0123344444321 1222 7999999999888898776542 222100
Q ss_pred CCCCCCCCCcceEEEeccCCcEEEEEEec-CCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEe-CCC
Q 007735 418 TKPVTGPPRMETSVINGTYRGFMEVILQN-NDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV-YPG 495 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~~g~~ve~vl~N-~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V-pp~ 495 (591)
..+.+++++.++.|++|||+++| .+.+.||||||||+||||+++.+. .+|+.+|.|||||.| +|+
T Consensus 367 ------~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg 433 (503)
T 1hfu_A 367 ------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTG 433 (503)
T ss_dssp ------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTT
T ss_pred ------cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCC
Confidence 11124577889999999999995 457899999999999999997652 478889999999999 999
Q ss_pred cEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCC-CCcccccCcCCCCC
Q 007735 496 AWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIP-DNALFCGALSHLQK 558 (591)
Q Consensus 496 g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p-~~~~~c~~~~~~~~ 558 (591)
+|++|||++||||.|+|||||++|++.|||..+.|...+ .. +..++| ++...|..|...+.
T Consensus 434 ~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~-~~-~~~~~p~~~~~~C~~~~~~~~ 495 (503)
T 1hfu_A 434 DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN-TV-DANNPPVEWAQLCEIYDDLPP 495 (503)
T ss_dssp CEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH-HH-HHCCCCHHHHHHHHHHHTCCH
T ss_pred ceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh-hh-hccCCChHHhhhccchhhcCC
Confidence 999999999999999999999999999999999885433 21 234456 45789998877643
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-92 Score=781.12 Aligned_cols=488 Identities=23% Similarity=0.331 Sum_probs=373.4
Q ss_pred CCceEEEEEEEEEEE--ecCCCee-eEEEEECCCCCCCcEEeeCCCEEEEEEEECC-CCCceeeecCccCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYIT--ASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
...+++|+|++++.+ +.+||++ +++|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++++++++||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 455799999999999 8999999 9999999999999999999999999999999 68999999999999899999999
Q ss_pred C-CCCccCC-CCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcc-eEEecccccCchHHH
Q 007735 100 G-TNCPIPP-KWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTAL 176 (591)
Q Consensus 100 ~-tq~~I~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~-~l~l~d~~~~~~~~~ 176 (591)
+ |||+|+| |++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+ +|.|. +|+|+||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHH
Confidence 8 9999999 9999999999 5899999999999999999999999998754 23 47887 999999999987776
Q ss_pred HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce
Q 007735 177 RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256 (591)
Q Consensus 177 ~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 256 (591)
..... ....+.++.++|||+..+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~-----~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNT-----GEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTT-----CCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcC-----CCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 43222 223456899999999976542 123468999999999999999999999999999999999999999999
Q ss_pred eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEee--cccccccCCCcceEEEEEecCCCCCCCCCCCCCCCC-CcCcc
Q 007735 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA--RFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPND-EFDKT 333 (591)
Q Consensus 257 ~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~-~~~~~ 333 (591)
+|+.++++.|+|||||||+|++++.+| +|||++.. ..... ...+....++|+|.++... +|..+.. ..+.
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~- 330 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPTDEGTPPVDH- 330 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCCCCCCCCCCC-
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCCCCCCcCCCc-
Confidence 999999999999999999999998778 99999987 32211 1123456899999875421 1111100 0010
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccC-CCCchhhhccccccccc
Q 007735 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN-PSTPIRLADWFKVKGAY 412 (591)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~-p~~P~l~~~~~~~~g~~ 412 (591)
.++++ ..+.+..+.+.|...+. ...++++.+.... ...+...|+|||++|.. ++.|+|.+... +..
T Consensus 331 ~~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~---g~~ 397 (559)
T 2q9o_A 331 QCLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILT---GNT 397 (559)
T ss_dssp TTCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHH---TCC
T ss_pred ccccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhc---CCc
Confidence 01111 11222111112221111 1112333333211 12345789999999964 56787755432 110
Q ss_pred cCCCCCCCCCCCCCcceEEEeccC-CcEEEEEEecCC----CcceeeeecCceEEEEEEcC---------CCCCCC-CCC
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTY-RGFMEVILQNND----TKMHAYHMSGYAFFVVGMDY---------GEWTDN-SRG 477 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vl~N~~----~~~HPfHlHG~~F~Vv~~g~---------g~~~~~-~~~ 477 (591)
++ | .+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++. +..
T Consensus 398 --~~---~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 --SY---P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp --CC---C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred --cC---C------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 01 1 1345666654 678889999976 68999999999999999987 666542 134
Q ss_pred CCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCC--CC-CcccccCcC
Q 007735 478 TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPI--PD-NALFCGALS 554 (591)
Q Consensus 478 ~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~--p~-~~~~c~~~~ 554 (591)
.+|+.+|+|||||.|++++|++|||++||||.|+|||||++|++.|||..|.|... +.. +..++ |+ ....|..|.
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~~~-~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-DLR-QRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-HHG-GGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-hhh-hccccCCchhhhhhccccc
Confidence 68999999999999999999999999999999999999999999999999987533 222 22333 54 457998887
Q ss_pred CC
Q 007735 555 HL 556 (591)
Q Consensus 555 ~~ 556 (591)
..
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 64
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-84 Score=700.72 Aligned_cols=407 Identities=20% Similarity=0.280 Sum_probs=325.2
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+.+.+++|+|++++..+.+||.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45567999999999999999999999999999999999999999999999999999999999999875 4899987
Q ss_pred CccCCCCcEEEEEEeC-CceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHH
Q 007735 103 CPIPPKWNWTYQFQVK-DQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALR 177 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~ 177 (591)
+.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+. .|...+++|++|+++||+++... +.
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTE-EC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCC-cC
Confidence 6799999999999986 589999999996 57999999999999986532 12113478999999999997531 00
Q ss_pred HHhh-cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce
Q 007735 178 KTLD-AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256 (591)
Q Consensus 178 ~~~~-~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 256 (591)
.... .......++.++|||+.. |.++|++| +|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCCccccccCCCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0000 000112468999999986 89999999 9999999999999999999999999999999997
Q ss_pred -eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc--------------cCCCcceEEEEEecCCCCCCCCC
Q 007735 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES--------------QWKRVTGVAILHYTNSKGKARGP 321 (591)
Q Consensus 257 -~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~ 321 (591)
+|+.++++.|+|||||||+|++++ +| +|+|++........ ........++++|.++.. ..+
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~ 305 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK--PLP 305 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--CCC
T ss_pred CCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc--ccc
Confidence 799999999999999999999997 77 89999865322110 011235678889976531 112
Q ss_pred CCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchh
Q 007735 322 LPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIR 401 (591)
Q Consensus 322 ~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l 401 (591)
+|... .... .+ +.+ ..+|++.|.... .+ ..|+|||++|..+..+
T Consensus 306 ~p~~l----------~~~~----~l------~~~---------~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~~-- 349 (439)
T 2xu9_A 306 LPKAL----------SPFP----TL------PAP---------VVTRRLVLTEDM----MA-ARFFINGQVFDHRRVD-- 349 (439)
T ss_dssp CCSCC----------CCCC----CC------CCC---------SEEEEEEEEEEG----GG-TEEEETTBCCCTTCCC--
T ss_pred CcccC----------CCcc----cC------CCC---------CcceEEEEEeec----cC-ceEeECCEECCCCCCc--
Confidence 22110 0000 00 111 124667666431 11 3799999998643211
Q ss_pred hhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCC
Q 007735 402 LADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNK 481 (591)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~ 481 (591)
+.++.|++++|+|+|.+.+.||||||||+||||+++++.+
T Consensus 350 ------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~---------- 389 (439)
T 2xu9_A 350 ------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF---------- 389 (439)
T ss_dssp ------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------
T ss_pred ------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------
Confidence 2457899999999999999999999999999999976533
Q ss_pred CCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 482 WDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 482 ~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||..++|.
T Consensus 390 ~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999884
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-84 Score=698.93 Aligned_cols=407 Identities=16% Similarity=0.182 Sum_probs=321.5
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCc
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 104 (591)
.+++|+|++++.++++ +|.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||++++.+ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999988 799999999999999999999999999999999999999999999998764 99998 899
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHH
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (591)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ..++|++|+|+||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996569999999997 7899999999999999764333222 24789999999999986544321
Q ss_pred HhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCce-
Q 007735 179 TLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSYT- 256 (591)
Q Consensus 179 ~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 256 (591)
...+.....++.++|||+.. |.++|++| +|||||||+|..+.+.|+| |||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11222345689999999987 89999999 9999999999999999999 899999999999997
Q ss_pred eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-------cCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 007735 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-------QWKRVTGVAILHYTNSKGKARGPLPEGPNDE 329 (591)
Q Consensus 257 ~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~ 329 (591)
+|..++++.|+|||||||+|++++ ++ +|+|++........ ........++++|..+..... +....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~-- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM-- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc--
Confidence 799999999999999999999995 56 89999765432110 011233457888875431100 0000010
Q ss_pred cCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhcccccc
Q 007735 330 FDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVK 409 (591)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~ 409 (591)
.|.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 312 ---------------~L~~~~~~~~--------~~~~~~~~~l~~----------~~~iNg~~f~~~~~----------- 347 (451)
T 2uxt_A 312 ---------------RLLPTEIMAG--------SPIRSRDISLGD----------DPGINGQLWDVNRI----------- 347 (451)
T ss_dssp ---------------CSSSSCCCCC--------CCSEEEEEEECS----------SSSBTTBCCCTTCC-----------
T ss_pred ---------------ccCCCCCCCC--------CCcceEEEEEee----------EEEECCEeCCCCCC-----------
Confidence 1111110010 123456665531 58899999864211
Q ss_pred ccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccce
Q 007735 410 GAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (591)
Q Consensus 410 g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDT 489 (591)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.||||
T Consensus 348 ---------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDT 396 (451)
T 2uxt_A 348 ---------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDT 396 (451)
T ss_dssp ---------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSE
T ss_pred ---------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccE
Confidence 12457899999999997 79999999999999999632 256678999999
Q ss_pred EEeCCCcEEEEEEEeCCccc----eeeecccccchhccceEEEEEecCC
Q 007735 490 TQVYPGAWTAILVSLDNVGI----WNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 490 v~Vpp~g~~~irf~adNpG~----W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
|.| +++++|+|++||||. |+|||||++|++.|||..++|...+
T Consensus 397 v~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 397 VWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 999 899999999999988 9999999999999999999998654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-83 Score=699.16 Aligned_cols=422 Identities=14% Similarity=0.154 Sum_probs=327.0
Q ss_pred ceEEEEEEEEEEE--ecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCC
Q 007735 26 LFVYFDFEVSYIT--ASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~--~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~ 103 (591)
..++|+|++++.. +.|||.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||++++. ++||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3579999999654 67899999999999999999999999999999999999999999999998864 799986 89
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCCCCCCC--CCCcceEEecccccCchHHHH
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIPIPFDT--PDGDITILIGDWYTRNHTALR 177 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~p~~~--~d~e~~l~l~d~~~~~~~~~~ 177 (591)
+|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||++++....+++. .+.|++|+|+||+++.++++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999966689999999974 5899999999999998765444432 367899999999998654432
Q ss_pred HHhhcCC-CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeC-------CeeEEE
Q 007735 178 KTLDAGK-GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN-------HNLLLA 249 (591)
Q Consensus 178 ~~~~~~~-~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~vi 249 (591)
. ..+. ....+|.++|||+.+ +.++|++ ++|||||||+|..+.+.|+|++ |+|+||
T Consensus 191 ~--~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI 253 (534)
T 3abg_A 191 T--TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI 253 (534)
T ss_dssp C--CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE
T ss_pred c--cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEE
Confidence 1 1121 233579999999987 7899998 5999999999999999999987 999999
Q ss_pred eecCCc-eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc--cccccCCCcceEEEEEecCCCCCCCCCCCCCC
Q 007735 250 ETEGSY-TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF--VNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326 (591)
Q Consensus 250 a~DG~~-~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~--~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p 326 (591)
++||.+ .+|+.++++.|+|||||||+|++++.+|++|+|++.... +...........++++|..+..+........|
T Consensus 254 a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P 333 (534)
T 3abg_A 254 ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP 333 (534)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC
T ss_pred EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc
Confidence 999985 579999999999999999999999877757999875421 11000111234588998754321000000000
Q ss_pred CCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccc
Q 007735 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~ 406 (591)
..|.+.. .|.+. ...++++.+... ...|+|||++|.++..|.+
T Consensus 334 -----------------~~L~~~~-~p~~~-------~~~~~~~~~~~~-------~~~w~iNG~~f~~~~~p~l----- 376 (534)
T 3abg_A 334 -----------------ANLRDVP-FPSPT-------TNTPRQFRFGRT-------GPTWTINGVAFADVQNRLL----- 376 (534)
T ss_dssp -----------------CCCCCCS-CCCCC-------CCCCEEEECSCC-------CSTTCCCCBTTBCTTSCCC-----
T ss_pred -----------------cccccCC-CCCCc-------cccceEEEEecc-------CceeEECCcccCCCCCcce-----
Confidence 0111100 11111 134566665431 1258999999976544432
Q ss_pred cccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC
Q 007735 407 KVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI 485 (591)
Q Consensus 407 ~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~ 485 (591)
+.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .
T Consensus 377 -------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~ 427 (534)
T 3abg_A 377 -------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-G 427 (534)
T ss_dssp -------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-S
T ss_pred -------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-C
Confidence 124679999999999874 599999999999999996554321 1345556 8
Q ss_pred ccceEEeCCCcEEEEEEE-eCCccceeeecccccchhccceEEEEEecCC
Q 007735 486 ARTTTQVYPGAWTAILVS-LDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 486 ~rDTv~Vpp~g~~~irf~-adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
|||||.|+|++|++|||+ +||||.|+|||||++|++.|||..++|...+
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999999999999999998 8999999999999999999999999998765
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-81 Score=684.81 Aligned_cols=429 Identities=17% Similarity=0.216 Sum_probs=321.9
Q ss_pred ceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC----------------------Cce
Q 007735 26 LFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE----------------------SLL 81 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~----------------------~~s 81 (591)
...+|++++++.... +++.++++|+|||++|||+||+++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 346699999988764 45678999999999999999999999999999999986 899
Q ss_pred eeecCccCCCCCCCCCCCC---CCCccCCCCcE---EEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCC
Q 007735 82 IHWSGIQQRRSSWQDGLLG---TNCPIPPKWNW---TYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP 151 (591)
Q Consensus 82 iH~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 151 (591)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++....
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 57999994 89999999555 99999866899999999974 58999999999999976644
Q ss_pred CCCCCCCCcceEEecccccCchHHHHHHhh-----------cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEec
Q 007735 152 IPFDTPDGDITILIGDWYTRNHTALRKTLD-----------AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHP 220 (591)
Q Consensus 152 ~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~ 220 (591)
.+++.+++|++|+|+||+++.+.++..... .......++.+||||+.+ |.++|++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP 247 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecC
Confidence 444456899999999999886544321110 001234579999999997 8899998
Q ss_pred CCEEEEEEeEeCCcceEEEEEeCC-eeEEEeecCCce-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc
Q 007735 221 GKTYRIRVHNVGISTSLNFRIQNH-NLLLAETEGSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES 298 (591)
Q Consensus 221 G~~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~ 298 (591)
++|||||||+|..+.+.|+|+|| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|..+.++.... + ..
T Consensus 248 -~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~-~-~~ 324 (513)
T 2wsd_A 248 -RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAG-C-GG 324 (513)
T ss_dssp -SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCC-S-SS
T ss_pred -CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccc-c-cc
Confidence 58999999999999999999999 999999999998 6999999999999999999999987772233333221 1 11
Q ss_pred cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCc
Q 007735 299 QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378 (591)
Q Consensus 299 ~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~ 378 (591)
........++++|..+...........|. .+.. + ...+. .....++++.|....
T Consensus 325 ~~~~~~~~~il~~~~~~~~~~~~~~~~p~-------~l~~---~-------~~~~~-------~~~~~~~~~~l~~~~-- 378 (513)
T 2wsd_A 325 DVNPETDANIMQFRVTKPLAQKDESRKPK-------YLAS---Y-------PSVQH-------ERIQNIRTLKLAGTQ-- 378 (513)
T ss_dssp SCCTTTTTEEEEEECCSCCSSCCCCCCCS-------BCSC---C-------GGGCC-------CCEEEEEEEEEEEEE--
T ss_pred cCCCCCCcceEEEEeccCcccCccCCCCc-------cccC---C-------CCccc-------CCCcceEEEEEEeec--
Confidence 11112345788997543111000000110 0100 0 00000 012345666665432
Q ss_pred ccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecC
Q 007735 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSG 458 (591)
Q Consensus 379 ~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG 458 (591)
...|...|+|||++|..+. + +.++.|++++|+|+|.+.+.|||||||
T Consensus 379 ~~~g~~~~~iNg~~~~~~~-~--------------------------------~~~~~g~~~~w~l~N~~~~~HP~HlHG 425 (513)
T 2wsd_A 379 DEYGRPVLLLNNKRWHDPV-T--------------------------------ETPKVGTTEIWSIINPTRGTHPIHLHL 425 (513)
T ss_dssp CTTSCEEEEETTBCTTSCC-C--------------------------------BCCBTTCEEEEEEEECSSSCEEEEESS
T ss_pred CCCCCceEeECCccCCCcc-c--------------------------------EecCCCCEEEEEEEcCCCCCcCEeEeC
Confidence 2235567999999885321 0 124579999999999988999999999
Q ss_pred ceEEEEEEcCC---CCCCCCCCCCCC---------CCCCccceEEeCCCcEEEEEEEe-CCccceeeecccccchhccce
Q 007735 459 YAFFVVGMDYG---EWTDNSRGTYNK---------WDGIARTTTQVYPGAWTAILVSL-DNVGIWNLRTENLDSWYLGQE 525 (591)
Q Consensus 459 ~~F~Vv~~g~g---~~~~~~~~~~n~---------~~p~~rDTv~Vpp~g~~~irf~a-dNpG~W~~HCHil~H~~~GM~ 525 (591)
|+||||+++.+ .|++. ..+|+ .++.|||||.|+|++++.|+|++ ||||.|+|||||++|++.|||
T Consensus 426 ~~F~Vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm 503 (513)
T 2wsd_A 426 VSFRVLDRRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMM 503 (513)
T ss_dssp CCEEEEEEEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCE
T ss_pred ceEEEEEecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCc
Confidence 99999999752 12111 01222 23569999999999999999998 899999999999999999999
Q ss_pred EEEEEecCC
Q 007735 526 TYVRVVNPE 534 (591)
Q Consensus 526 ~~~~V~~p~ 534 (591)
..++|..++
T Consensus 504 ~~~~V~~~~ 512 (513)
T 2wsd_A 504 RPMDITDPH 512 (513)
T ss_dssp EEEEEBCC-
T ss_pred eeEEEeCCC
Confidence 999997653
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-80 Score=668.23 Aligned_cols=414 Identities=19% Similarity=0.211 Sum_probs=316.1
Q ss_pred cccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
..+.+++++|+|++++.++.+ +|.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 44 ~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p 121 (481)
T 3zx1_A 44 ESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP 121 (481)
T ss_dssp CCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT
T ss_pred cccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc
Confidence 346678899999999999986 6999999999999999999999999999999999999999999999874 6899997
Q ss_pred CCCCccCCCCcEEEEEEeCCc-eeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH
Q 007735 100 GTNCPIPPKWNWTYQFQVKDQ-VGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT 174 (591)
Q Consensus 100 ~tq~~I~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~ 174 (591)
||+|+||++|+|+|+++++ +||||||||. +.|+.+||+|+|||++++....++ +.++ |+|+||+++..+
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999999643 8999999995 689999999999999987643333 4454 999999998654
Q ss_pred HHHHH-hhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecC
Q 007735 175 ALRKT-LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEG 253 (591)
Q Consensus 175 ~~~~~-~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 253 (591)
++... .........++.++|||+.. |.++|++|+ ||||||+|..+.+.|+|+||+|+||++||
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DG 259 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDG 259 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETT
T ss_pred ccccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCC
Confidence 32200 00000123578999999986 899999998 99999999999999999999999999998
Q ss_pred Cce-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcC
Q 007735 254 SYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFD 331 (591)
Q Consensus 254 ~~~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~ 331 (591)
.++ +|+.++++.|+|||||||+|++++ ++ .|.+++........ .........++++.... .+.++|..
T Consensus 260 g~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~~------ 329 (481)
T 3zx1_A 260 GLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPKN------ 329 (481)
T ss_dssp EEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCSC------
T ss_pred CccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCcc------
Confidence 765 699999999999999999999985 45 78887754322100 00012223344433221 11112210
Q ss_pred cccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcc----cCCe--------eEEEEcCeeccCCCCc
Q 007735 332 KTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEM----IDGK--------RRATLSGISFVNPSTP 399 (591)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~----~~g~--------~~~~iNg~s~~~p~~P 399 (591)
+.+..+.+ ..+.+|++.|....... ..+. ..|+|||+.|.. +.|
T Consensus 330 --------------l~~~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~ 385 (481)
T 3zx1_A 330 --------------LKIFKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI 385 (481)
T ss_dssp --------------SCCCCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC
T ss_pred --------------ccCCCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-CCc
Confidence 00000001 11245666665422100 0011 139999988742 111
Q ss_pred hhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEE--cCCCCCCCCCC
Q 007735 400 IRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGM--DYGEWTDNSRG 477 (591)
Q Consensus 400 ~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~--g~g~~~~~~~~ 477 (591)
.+.++.|++|+|+|.|.+.+.|||||||++|+|+++ ++..+
T Consensus 386 -------------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~------ 428 (481)
T 3zx1_A 386 -------------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ------ 428 (481)
T ss_dssp -------------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE------
T ss_pred -------------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC------
Confidence 134678999999999999999999999999999998 43221
Q ss_pred CCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 478 TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 478 ~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
...++.|||||.|+|+++++|+|++||||.|+|||||++|++.|||..++|.
T Consensus 429 --~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 --KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp --ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred --CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1235789999999999999999999999999999999999999999999996
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-80 Score=692.89 Aligned_cols=460 Identities=15% Similarity=0.130 Sum_probs=310.6
Q ss_pred CCceEEEEEEEEEEEe--cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCC----------------------
Q 007735 24 ADLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDES---------------------- 79 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~---------------------- 79 (591)
....++|++++++... .+++.++++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 3445789999988775 4566788999999999999999999999999999999765
Q ss_pred -------------------ceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhc
Q 007735 80 -------------------LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRAS 136 (591)
Q Consensus 80 -------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~ 136 (591)
|+|||||+++. +++||++ ||+|.||++|+|+|++.+++||||||||. +.|+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 67899999774 5799987 99999999999999996668999999995 689999
Q ss_pred CceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH--h-------hc-----C---CCCCCCceEEEcCcCC
Q 007735 137 GGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT--L-------DA-----G---KGLGMPDGVLINGKGP 199 (591)
Q Consensus 137 Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~--~-------~~-----~---~~~~~~~~~lING~~~ 199 (591)
||+|+|||+++++...+++.+++|++|+|+||+++.+.+.... + .. + .....++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 9999999999876666666779999999999998754332110 0 00 0 0123468899999987
Q ss_pred CCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC-------eeEEEeecCCcee-eeee------eEEE
Q 007735 200 YQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH-------NLLLAETEGSYTV-QQNY------TSLD 265 (591)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~------d~v~ 265 (591)
|.+.+++ ++|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.+ ++|.
T Consensus 265 --------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 265 --------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp --------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEE
T ss_pred --------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEE
Confidence 8899876 58999999999999999999998 4999999999985 6544 5899
Q ss_pred EccccEEEEEEEeCCCCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCC--CCCCCCCCCCCCcCccccccccc
Q 007735 266 IHVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGK--ARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 266 i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
|+|||||||+|++++.++..|+++......... .........+++|...... ....+|..... ... ..
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~-~~---- 402 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSG--SFR-RM---- 402 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCS--SCC-CC----
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccc--ccc-cc----
Confidence 999999999999998877334444333221111 0122334456666533211 11111111000 000 00
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCC-cccCCeeEEEEcCeecc-CCCCchhhhcc-ccccc---cccC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP-EMIDGKRRATLSGISFV-NPSTPIRLADW-FKVKG---AYKL 414 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~~~iNg~s~~-~p~~P~l~~~~-~~~~g---~~~~ 414 (591)
. ...+ ...+...+..... ........+.++..... ....|...... ....+ .+..
T Consensus 403 ------~----~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (612)
T 3gyr_A 403 ------S----HDIP---------HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRR 463 (612)
T ss_dssp ------C----TTSC---------CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEE
T ss_pred ------c----cccc---------cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccc
Confidence 0 0000 0001111110000 00000111111111000 00000000000 00000 0000
Q ss_pred CCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCC----------------CCCC
Q 007735 415 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN----------------SRGT 478 (591)
Q Consensus 415 ~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~----------------~~~~ 478 (591)
++....+...+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+... ....
T Consensus 464 -------n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 464 -------TARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp -------EECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred -------cCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 00001122335678899999999999999999999999999999865433211 0123
Q ss_pred CCCCCCCccceEEeCCCcEEEEEEE-eCCccceeeecccccchhccceEEEEEecCCC
Q 007735 479 YNKWDGIARTTTQVYPGAWTAILVS-LDNVGIWNLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 479 ~n~~~p~~rDTv~Vpp~g~~~irf~-adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
.+..++.|||||.|++++|++|||+ +||||.|+||||||+|||.|||..|+|+.|+.
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 5667789999999999999999998 79999999999999999999999999998864
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-80 Score=665.25 Aligned_cols=385 Identities=17% Similarity=0.241 Sum_probs=301.0
Q ss_pred EEECCC-CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEe
Q 007735 49 IAINGK-FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYF 127 (591)
Q Consensus 49 ~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH 127 (591)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||++++ +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 57999997 9999999999999997689999999
Q ss_pred cC----hhhhhhcCceeeEEEecCCCCCCCCCCCC-CcceEEecccccCchHHHHHH--hhcCCCCCCCceEEEcCcCCC
Q 007735 128 PS----LHFQRASGGFGGFIINNRAIIPIPFDTPD-GDITILIGDWYTRNHTALRKT--LDAGKGLGMPDGVLINGKGPY 200 (591)
Q Consensus 128 ~H----~~~q~~~Gl~G~liV~~~~~~~~p~~~~d-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~lING~~~~ 200 (591)
|| ++.|+++||+|+|||++++.. .+++ +| +|++|+++||+++. .++... .........++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999997664 2222 25 89999999999986 442210 00011124579999999987
Q ss_pred CCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE--eC---CeeEEEeecCCcee-eeeeeEEEEccccEEEE
Q 007735 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI--QN---HNLLLAETEGSYTV-QQNYTSLDIHVGQSYSF 274 (591)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~i~pGqR~dv 274 (591)
+.++|++| +|||||||+|..+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEeCCCCCcceEEEEeecccccc----------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccc
Q 007735 275 LVTMDQNASTDYYIVASARFVNES----------QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRW 344 (591)
Q Consensus 275 lv~~~~~~g~~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 344 (591)
+|++++ + .|+|++........ ........++++|.++..... |.. +..
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~-------L~~------ 303 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VEA-------LSD------ 303 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CCC-------CSC------
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------ccc-------cCC------
Confidence 999983 5 89999876432110 011234567788865431110 110 000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCC
Q 007735 345 NVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGP 424 (591)
Q Consensus 345 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~ 424 (591)
+. +.+. ....++++.|... ...|+|||++|..+ .|.
T Consensus 304 -lp---~~~~--------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------ 339 (448)
T 3aw5_A 304 -PP---PEPP--------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------ 339 (448)
T ss_dssp -CC---CCCC--------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT------------------------
T ss_pred -CC---CCCC--------CCCceEEEEEeCC-------CceeeECCCcCCCC-CCc------------------------
Confidence 00 0010 1235677777542 13699999998632 121
Q ss_pred CCcceEEEe-ccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCC-CCCCCCC----CCCCCccceEEeCCCcE
Q 007735 425 PRMETSVIN-GTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTD-NSRGTYN----KWDGIARTTTQVYPGAW 497 (591)
Q Consensus 425 ~~~~~~v~~-~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~-~~~~~~n----~~~p~~rDTv~Vpp~g~ 497 (591)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .+...+| ..++.|||||.|+|+++
T Consensus 340 -------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~ 411 (448)
T 3aw5_A 340 -------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGET 411 (448)
T ss_dssp -------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCE
T ss_pred -------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCE
Confidence 12 457999999999998 8899999999999999995 44421 1122232 34557999999999999
Q ss_pred EEEE--EE---eCCccceeeecccccchhccceEEEEEe
Q 007735 498 TAIL--VS---LDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 498 ~~ir--f~---adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
++|+ |+ +||| |+|||||++|++.|||..++|.
T Consensus 412 ~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 412 VKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 8655 99 9999 9999999999999999999883
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-78 Score=651.08 Aligned_cols=417 Identities=18% Similarity=0.236 Sum_probs=308.0
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCc
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 104 (591)
+..+.|+|++++.+++++|.++++|+|||++|||+|++++||+|+|+|+|+|+++++|||||++++ +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 445789999999999999999999999999999999999999999999999999999999999886 4799998 899
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHH
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (591)
|.||++|+|+|++.+++||||||||. +.|+++||+|+|||++++....+++ ...+|++|+|+||+++.++++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 6899999999999999765433322 23568999999999975543211
Q ss_pred Hhh--cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCc
Q 007735 179 TLD--AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSY 255 (591)
Q Consensus 179 ~~~--~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~ 255 (591)
..+ .......+|.++|||+.+ |.+.+ +|++|||||||+|..+.+.|+| +||+|+||++||.+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000123578999999987 77776 5689999999999999999999 69999999999998
Q ss_pred e-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccC-CCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc
Q 007735 256 T-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQW-KRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (591)
Q Consensus 256 ~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 333 (591)
+ +|+.+++|.|+|||||||+|++++ ++ .|++++.......... .......+++......+....+|..
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~-------- 305 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDT-------- 305 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSC--------
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcc--------
Confidence 6 799999999999999999999995 45 8999875432211000 0011222333221110011111110
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCC-------------------Cc---------ccCC---
Q 007735 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKP-------------------PE---------MIDG--- 382 (591)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~-------------------~~---------~~~g--- 382 (591)
|...++.|.. ....+|++.|.... .. ...|
T Consensus 306 ------------L~~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 366 (488)
T 3od3_A 306 ------------LSSLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMN 366 (488)
T ss_dssp ------------CCCCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCC
T ss_pred ------------cccCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccc
Confidence 0000000000 01123444442110 00 0011
Q ss_pred ----------eeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC-Ccc
Q 007735 383 ----------KRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKM 451 (591)
Q Consensus 383 ----------~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~ 451 (591)
...|+|||++|.. +.| .+.++.|++++|.|.|.+ .+.
T Consensus 367 ~~~~g~~~~~~~~~~ING~~~~~-~~~-------------------------------~~~~~~G~~e~w~l~N~~~~~~ 414 (488)
T 3od3_A 367 HMNHGGKFDFHHANKINGQAFDM-NKP-------------------------------MFAAAKGQYERWVISGVGDMML 414 (488)
T ss_dssp CSCCCGGGCGGGCEEETTBCCCT-TCC-------------------------------SEECCBSSCEEEEEECTTCCCC
T ss_pred cccccccccccceeeECCeeCCC-CCC-------------------------------ceEcCCCCEEEEEEEeCCCCCC
Confidence 0138999998752 111 134678999999999987 579
Q ss_pred eeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC----CccceeeecccccchhccceEE
Q 007735 452 HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD----NVGIWNLRTENLDSWYLGQETY 527 (591)
Q Consensus 452 HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad----NpG~W~~HCHil~H~~~GM~~~ 527 (591)
|||||||++|+|+++++.... ..++.|||||.|+ |+++.|+|++| |||.|+||||+|+|+|.|||..
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~ 485 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLG 485 (488)
T ss_dssp EEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEE
T ss_pred ccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEE
Confidence 999999999999998643221 1246799999999 99999999974 5789999999999999999999
Q ss_pred EEE
Q 007735 528 VRV 530 (591)
Q Consensus 528 ~~V 530 (591)
|+|
T Consensus 486 f~V 488 (488)
T 3od3_A 486 FTV 488 (488)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-55 Score=514.28 Aligned_cols=456 Identities=12% Similarity=0.139 Sum_probs=321.5
Q ss_pred cccCCceEEEEEEEEEEEe--cCCC--------------------------eeeEEE-------EECCC--------CCC
Q 007735 21 CSAADLFVYFDFEVSYITA--SPLG--------------------------VPQQVI-------AINGK--------FPG 57 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~--~~dG--------------------------~~~~~~-------~~Ng~--------~pg 57 (591)
..+.+.+|+|.+.|.+... .|.| +.++.+ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 5555678999999988754 3332 233444 57877 999
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCC----CCCCCCCCCC---CCCccCCCCcEEEEEEeCCc---------e
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLLG---TNCPIPPKWNWTYQFQVKDQ---------V 121 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~~---------~ 121 (591)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ |||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999986 5578888884 79999999999999999754 5
Q ss_pred eeeEEecChhh--hhhcCceeeEEEecCCCCCCCCC-CCCCcceEEec------ccccCchHHHHHHh-hcCCCC-----
Q 007735 122 GSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFD-TPDGDITILIG------DWYTRNHTALRKTL-DAGKGL----- 186 (591)
Q Consensus 122 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~p~~-~~d~e~~l~l~------d~~~~~~~~~~~~~-~~~~~~----- 186 (591)
||||||||.+. |+++||+|+|||++++....|.+ .+|+|++|+++ ||++.+. +.... +.+...
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999875 56899999999999876544432 45889999999 6766432 11111 111000
Q ss_pred --CCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 187 --GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 187 --~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
..++.++|||+.+ +..+.++|++|++|||||+|+|.. ..+.|+|+||+|+ ++|..+|+
T Consensus 253 ~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dt 313 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDT 313 (1065)
T ss_dssp HHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESE
T ss_pred ccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecE
Confidence 0245799999985 234789999999999999999976 6899999999999 35678999
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccc
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIR 343 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 343 (591)
+.|+|||||||+|++++ +| +|+|+++...... ....+.++|.+...+.+.+.|..+. ... .+.+++++.
T Consensus 314 v~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~~---~~~-~~i~A~e~~ 382 (1065)
T 2j5w_A 314 INLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGKH---VRH-YYIAAEEII 382 (1065)
T ss_dssp EEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTSE---EEE-EEEEEEEEE
T ss_pred EEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCccccccccccc---eeE-EEEeceecc
Confidence 99999999999999997 67 9999998754322 2456888887765443333332211 112 356788899
Q ss_pred cccccCCC------CCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCC
Q 007735 344 WNVSASGA------RPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 344 ~~l~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
|++.+... ++++++++ .+.+ |.+... .++++.+..++ ++|.+ ++|+.+.+
T Consensus 383 wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~-~ig~~y~k~v~-~~y~d--------------~~f~~~~~ 438 (1065)
T 2j5w_A 383 WNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGTT-RIGGSYKKLVY-REYTD--------------ASFTNRKE 438 (1065)
T ss_dssp EESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBTT-BCCSEEEEEEE-EEESS--------------TTCCSBCC
T ss_pred cccCCCCcccccccccCCCccc-------chhh-hccCCc-ccCceEeeeee-ecccC--------------CceEEcCc
Confidence 99887653 34555432 1112 232222 46667666666 66642 33443333
Q ss_pred CCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcE
Q 007735 418 TKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAW 497 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~ 497 (591)
..|.......-.+++.++.|++++++|+|.....|+||+||++|++++.|. .+.... .+..+...+++..|.||+.
T Consensus 439 ~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g~-~~~~~~---~~~~~~~~~~~~~v~Pg~~ 514 (1065)
T 2j5w_A 439 RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGT-YYSPNY---NPQSRSVPPSASHVAPTET 514 (1065)
T ss_dssp CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSB-CCBCC----------CCCCSSCBCTTCE
T ss_pred CCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCCc-cccccc---ccccCCccCCCcccCCCCc
Confidence 222211222335788999999999999999999999999999999988753 221110 0111233455566788887
Q ss_pred EEEEEEe---CCcc-------ceeeeccccc--chhccceEEEEEecCCCC
Q 007735 498 TAILVSL---DNVG-------IWNLRTENLD--SWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 498 ~~irf~a---dNpG-------~W~~HCHil~--H~~~GM~~~~~V~~p~~~ 536 (591)
.+.++.. +.|| .|+||+|+.. .++.|+...+.|..+...
T Consensus 515 ~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~~~~l 565 (1065)
T 2j5w_A 515 FTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSL 565 (1065)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTCB
T ss_pred EEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEeccccc
Confidence 6666654 3565 7999999855 567899999999876644
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-53 Score=434.26 Aligned_cols=271 Identities=22% Similarity=0.308 Sum_probs=225.6
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+++|+|++++..+.+ +|..+++|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..+.++||+|+ |||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999877 58899999999999999999999999999999999999999999999988889999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhh---hcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR---ASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||++++..+.+. .+|+|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 6999999999987543 58999999999875432211 458999999999998633211 1
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce-eee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT-VQQ 259 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~ 259 (591)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||+|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112223357899999998732 2559999999999999999976 799999999999999999998 689
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-cCCCcceEEEEEecCCC
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNSK 315 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 315 (591)
..|++.|.||||+||++++++ +| .|.++++....... ........++++|.+..
T Consensus 224 ~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999995 68 89999987533211 00113456899998753
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-55 Score=495.67 Aligned_cols=239 Identities=15% Similarity=0.215 Sum_probs=179.7
Q ss_pred EEEEEEEEecCC-CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC----CCCCCCCCC---CCC
Q 007735 31 DFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLL---GTN 102 (591)
Q Consensus 31 ~~~v~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~---~tq 102 (591)
.+.+++...... |.+++.|+ ++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+++||++ .||
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq 126 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKED 126 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccccc
Confidence 344444444443 55555554 8999999999999999999999999999999999874 445556555 379
Q ss_pred CccCCCCcEEEEEEeCC---------ceeeeEEecChhh--hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecc----
Q 007735 103 CPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGD---- 167 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d---- 167 (591)
|+|+||++|+|+|++++ |+||||||||.+. |+.+||+|+|||+++...........+|++|++++
T Consensus 127 ~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~ 206 (742)
T 2r7e_A 127 DKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEG 206 (742)
T ss_dssp SSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCS
T ss_pred CcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCC
Confidence 99999999999999853 4699999999875 89999999999999765332211223788887753
Q ss_pred --cccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCC
Q 007735 168 --WYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNH 244 (591)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh 244 (591)
||++........+........++.++|||+.. ++.+.+++++|++|||||+|+|... .|.|||+||
T Consensus 207 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh 275 (742)
T 2r7e_A 207 KSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGH 275 (742)
T ss_dssp SSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTC
T ss_pred ccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCC
Confidence 66653221100111111122357899999985 2347899999999999999999875 789999999
Q ss_pred eeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 245 NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 245 ~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+|+|++. .+|++.|.|||+++|++++++ +| .|.++++..
T Consensus 276 ~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~ 314 (742)
T 2r7e_A 276 TFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHIS 314 (742)
T ss_dssp CCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSS
T ss_pred EEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCCh
Confidence 9999853 367889999999999999995 67 888877653
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=429.79 Aligned_cols=271 Identities=21% Similarity=0.401 Sum_probs=224.8
Q ss_pred ceEEEEEEEEEEEecCC-CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+++|+|++++.++.++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++|+||+|+ |||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999998875 9999999999999999999999999999999999999999999999998889999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhh--hhh-cCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHF--QRA-SGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
+|.||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+. ..|+|++++++||++..... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccc---cC
Confidence 99999999999999 58999999999764 888 9999999999865432221 34789999999998742111 00
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee-ee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV-QQ 259 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~-p~ 259 (591)
..+.....++.++|||+.++. .+.+++++|++|||||+|++.. .+.|+|+||+|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~-----------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPL-----------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCCC-----------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 111222257899999998621 2569999999999999999955 8999999999999999999986 88
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccc-cccCCCcceEEEEEecCCC
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVN-ESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~-~~~~~~~~~~ail~y~~~~ 315 (591)
..|++.|.||||+||+|++++ +| .|.++++..... ..........++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999986 57 798988765421 1000123447899998653
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-49 Score=405.43 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=221.9
Q ss_pred ccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 98 (591)
.+.+.+++|+|++++...++ ||.++.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 34557899999999999987 799999999999999999999999999999999997 58999999984 37887
Q ss_pred CCCCCccCCCCcEEEEEEeCCceeeeEEecCh---hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH
Q 007735 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+. ...|.||++++|+|++ +|+||||||||. +.|+.+||+|+|||++++. . +.+|+|++++++||++++...
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~--p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--L--PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--C--CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--C--CCCceEEEEEeeeeeccCccc
Confidence 75 2359999999999999 689999999996 6899999999999998653 2 245899999999999874210
Q ss_pred --------HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeE
Q 007735 176 --------LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLL 247 (591)
Q Consensus 176 --------~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 247 (591)
+.... ...++.++|||+.++++ ..+.+++++||+|||||+|+|..+.+.|+|+||+|+
T Consensus 182 ~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~ 247 (327)
T 1kbv_A 182 AQGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFD 247 (327)
T ss_dssp CCEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred cccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEE
Confidence 11111 12468999999997542 126799999999999999999888999999999999
Q ss_pred EEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 248 LAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 248 via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
||+.||.+++|..++++.|+||||+||+|++++ +| .|+|+++...... +....|+++|.+..
T Consensus 248 vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 248 KVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 999999999999999999999999999999996 68 9999998754321 13468999998754
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=429.76 Aligned_cols=401 Identities=15% Similarity=0.084 Sum_probs=264.5
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+++.+++++++++.+...++ ..+++|||++ ||+|+|++||+|+++|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 44456667766655444443 3567999999 999999999999999999998889999999631 157
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCC-----CCCCcceEEecccccCchHH--
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFD-----TPDGDITILIGDWYTRNHTA-- 175 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~-----~~d~e~~l~l~d~~~~~~~~-- 175 (591)
|+|.||++++|.|++ .++||||||||...|+.+||+|.|+|+++.......+ ....+++..+ |+.......
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 999999999999998 4799999999998999999999999998754221000 0011111111 111110000
Q ss_pred HH-HHhhcCC-CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCC-cceEEEEEeCCeeEEEeec
Q 007735 176 LR-KTLDAGK-GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI-STSLNFRIQNHNLLLAETE 252 (591)
Q Consensus 176 ~~-~~~~~~~-~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~D 252 (591)
+. ....... .....+.++|||+.. .|++++++|++|||||+|.+. ...+.+++||. ++.|
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEeccCCceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 00 0000000 111246799999863 289999999999999999985 34566777664 3689
Q ss_pred CCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCc
Q 007735 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK 332 (591)
Q Consensus 253 G~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 332 (591)
|.+ +++.|.||||+++++++++ +| +||++++....... ......+.+.|.... ++| .. +.
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~~--~~~Gl~g~l~v~~~~-----~~P---~~--d~ 290 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPTH--ITNGMYGLLLVEPEG-----GLP---QV--DR 290 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHHH--HHTTCEEEEEEECTT-----CSC---CC--SE
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHHH--HhCCCEEEEEEeCCC-----CCC---CC--Ce
Confidence 973 2345999999999999986 57 99999875311000 012235666665432 122 11 21
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccc
Q 007735 333 TFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAY 412 (591)
Q Consensus 333 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~ 412 (591)
...+.. . .+..... ....+.. .. .+... .......|.|||+.+...
T Consensus 291 ~~~~~~-~--~~~~~~~---~~~~g~~-----~~----~~~~~---~~~~~~~~~iNG~~~~~~---------------- 336 (447)
T 2dv6_A 291 EFYVMQ-G--EIYTVKS---FGTSGEQ-----EM----DYEKL---INEKPEYFLFNGSVGSLT---------------- 336 (447)
T ss_dssp EEEEEE-E--EECBSSC---TTCCEEC-----CB----BHHHH---HTTCCSEEEETTSTTCCC----------------
T ss_pred eEEEEe-c--ccccCCc---ccccccc-----cC----ChHHh---hccCCCEEEECCcccCCC----------------
Confidence 111100 0 0110000 0000000 00 00000 011124688999875311
Q ss_pred cCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceE
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTT 490 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv 490 (591)
....+.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+
T Consensus 337 ---------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv 391 (447)
T 2dv6_A 337 ---------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTV 391 (447)
T ss_dssp ---------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEE
T ss_pred ---------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEE
Confidence 012356778999999999986 46899999999999999964321 2344 79999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
.|+||+++.|+|++||||.|+||||+++|+..||+..++|..+..
T Consensus 392 ~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 392 SVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999976543
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=384.34 Aligned_cols=236 Identities=19% Similarity=0.246 Sum_probs=205.0
Q ss_pred CceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CC
Q 007735 25 DLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
..+++|+|++++..... +|..+++|+|||++|||+|++++||+|+|+|+|.++++++|||||++ .+++||+|+ +|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccc
Confidence 34689999999988765 49999999999999999999999999999999999999999999996 368999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChh---hhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~ 179 (591)
|+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.. ...|+|++|+++||+.++
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC-------
Confidence 999999999999999 6999999999986 7999999999999987653 234799999999998762
Q ss_pred hhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCCeeEEEeecCCceee
Q 007735 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 180 ~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p 258 (591)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|++... .|.|||+||.|+|++.++....|
T Consensus 177 ---g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~ 240 (288)
T 3gdc_A 177 ---G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPS 240 (288)
T ss_dssp ---T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCS
T ss_pred ---C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCC
Confidence 1 136799999998621 124699999999999999998653 79999999999999855444457
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
...|++.|.||||++|+++++ .+| .|.++++..
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp EEESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred ceeeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 889999999999999999999 568 899988754
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=457.13 Aligned_cols=412 Identities=14% Similarity=0.090 Sum_probs=265.7
Q ss_pred eeeEEEEECCCCCC--CcEEeeCCCEEEEEEEECCCCCceeeecCccCCC-CCCCCCCCC-CCCccCCCCcEEEEEEeCC
Q 007735 44 VPQQVIAINGKFPG--PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGLLG-TNCPIPPKWNWTYQFQVKD 119 (591)
Q Consensus 44 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~ 119 (591)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||++|.+ +.++||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56799999999999 889999999999999976 5569999999998 999999997 7 999999999999998 6
Q ss_pred ceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEe----cccccCchHHHHHHh-h-cCCCCCCCceEE
Q 007735 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILI----GDWYTRNHTALRKTL-D-AGKGLGMPDGVL 193 (591)
Q Consensus 120 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l----~d~~~~~~~~~~~~~-~-~~~~~~~~~~~l 193 (591)
++||||||||.+.|+.+||+|.++|++......++..++.|.+++| .||++.+...+...+ + .+. .|...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554445446688999999 899998665443221 1 121 266777
Q ss_pred EcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE----------EeecCCceeeeeeeE
Q 007735 194 INGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL----------AETEGSYTVQQNYTS 263 (591)
Q Consensus 194 ING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v----------ia~DG~~~~p~~~d~ 263 (591)
+|+... .+ |++|++ ...+.+.+|+|++ +++|| .+
T Consensus 768 ~n~~~~---------------~i----G~tY~k---------~~y~~~~d~tft~~~~r~~~~~~v~~pG--------P~ 811 (1065)
T 2j5w_A 768 LDKGEF---------------YI----GSKYKK---------VVYRQYTDSTFRVPVERKAEEEHLGILG--------PQ 811 (1065)
T ss_dssp TCCTTT---------------CC----CSEEEE---------EEEEEESSTTCCSBCCCCGGGGGGTTSC--------CC
T ss_pred ecCCCc---------------cc----cceEee---------eEEEEEcCCcceecccCCccccccCCCC--------CE
Confidence 787653 12 899998 3557899999998 56666 47
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeeccccc-----ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc-ccc-
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE-----SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT-FSM- 336 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~-----~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-~~~- 336 (591)
|.+.+|||++|.++-+ .+. .|.|+.+...... ..+.....+.+..|.. .+|.+..|. +.. |..
T Consensus 812 I~v~~Gd~v~v~l~N~-~~~-~~sih~HGl~~~~~~~~~i~PG~~~ty~~~~~~~-----~gp~~~~~~---~gt~wYhs 881 (1065)
T 2j5w_A 812 LHADVGDKVKIIFKNM-ATR-PYSIHAHGVQTESSTVTPTLPGETLTYVWKIPER-----SGAGTEDSA---CIPWAYYS 881 (1065)
T ss_dssp EEEETTEEEEEEEEEC-SSS-CBCCEESSCBCSCSCCCCBCTTCEEEEEEECCGG-----GSCCTTSCS---EEEEEEEC
T ss_pred EEEecCCEEEEEEEeC-CCC-CceEeeccccccCCCCceeCCCCeEEEEEEecCc-----cCCccccCC---ceEEEEec
Confidence 9999999999998855 334 8888876521111 0011112222222221 112222211 011 100
Q ss_pred --ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccC-C-CCchhhhccccccccc
Q 007735 337 --NQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN-P-STPIRLADWFKVKGAY 412 (591)
Q Consensus 337 --~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~-p-~~P~l~~~~~~~~g~~ 412 (591)
...+.+...|... ....+.+.........+.++.+..+.. ..++......|+.+|.. | ..+++...+......+
T Consensus 882 h~~~~~q~~~GL~G~-liV~~~~~l~~~~~~~d~D~~l~~~~~-d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~ 959 (1065)
T 2j5w_A 882 TVDQVKDLYSGLIGP-LIVCRRPYLKVFNPRRKLEFALLFLVF-DENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMH 959 (1065)
T ss_dssp CTTHHHHHHTTCEEE-EEEECCC-----CCCCEEEEEEEEEEE-EGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEE
T ss_pred CCChHHhhhccccce-eEecCcccccccCCCcceEEEEEEEee-cCCcceeeccCcccccCCccccCcchhhhhccCceE
Confidence 0011111001000 000000000000011223332221100 00000001123333331 1 1222111000000001
Q ss_pred cCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceE
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTT 490 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv 490 (591)
. .++.....+..+.++.|++|+|+|.|.+ ...||||||||.|+|++++ |.+|||+
T Consensus 960 ~-------iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv 1016 (1065)
T 2j5w_A 960 A-------INGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVF 1016 (1065)
T ss_dssp E-------ETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEE
T ss_pred E-------ECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEE
Confidence 1 1111111234567889999999999985 5789999999999998753 6789999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.|+|+++++|+|++||||.|+||||+++|++.|||..++|.+.+
T Consensus 1017 ~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1017 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 99999999999999999999999999999999999999998664
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=395.32 Aligned_cols=268 Identities=18% Similarity=0.227 Sum_probs=221.2
Q ss_pred ccCCceEEEEEEEEEEEec-CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITAS-PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~-~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 98 (591)
.+.+.+++|+|++++.++. +||.++.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 4566789999999999988 5899999999999999999999999999999999986 499999999853 6887
Q ss_pred CCCCCccCCCCcEEEEEEeCCceeeeEEecC---hhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH
Q 007735 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPS---LHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+.+ .+|.||++++|+|++ +++|||||||| +..|+.+||+|+|||++++.. +.+|+|++|+++||+++....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999998 68999999996 568999999999999986532 245899999999999875310
Q ss_pred -HH-HHhh-cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeec
Q 007735 176 -LR-KTLD-AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252 (591)
Q Consensus 176 -~~-~~~~-~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 252 (591)
.. ...+ .......++.++|||+.... ...+.+++++|++|||||+|+|....+.|+|+||+|+||+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 00 0000 00012467899999998621 112689999999999999999988899999999999999999
Q ss_pred CCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 253 G~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
|.+++|..++++.|.||||+||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 9999999999999999999999999995 67 9999997654311 13567999998654
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-45 Score=377.79 Aligned_cols=269 Identities=16% Similarity=0.150 Sum_probs=210.4
Q ss_pred cccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
+.+.+.+++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 355567899999999999877 5999999999999999999999999999999999 589999999987654555555
Q ss_pred C-CCCccCCCCcEEEEEEeCCceeeeEEecChh-----hhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEecccc
Q 007735 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH-----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWY 169 (591)
Q Consensus 100 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~ 169 (591)
. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|+ .+|+|++|+++|||
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 6899999999985 69999999999999865422 122 45899999999999
Q ss_pred cCc--hHHHH----------HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceE
Q 007735 170 TRN--HTALR----------KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSL 237 (591)
Q Consensus 170 ~~~--~~~~~----------~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 237 (591)
+.. ...+. ..++. .....++.++|||+.... ...+.++|++||+||||++|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHH-hhccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 831 11110 00010 012457899999998521 113679999999988877776544333
Q ss_pred EEEEeCCeeEEEeecCCceee-e-eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccc-cccCCCcceEEEEEecCC
Q 007735 238 NFRIQNHNLLLAETEGSYTVQ-Q-NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVN-ESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 238 ~~~i~gh~~~via~DG~~~~p-~-~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~-~~~~~~~~~~ail~y~~~ 314 (591)
..+++|.|+|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|+++++..... . ....++++|.+.
T Consensus 249 -h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~~-----~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 249 -HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAVH-----KGATAHVLVEGE 319 (333)
T ss_dssp -EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TCCEEEEEEESC
T ss_pred -EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHhh-----CCCEEEEEEcCC
Confidence 348899999999 9999874 3 489999999999999999996 58 999999875432 2 346689999865
Q ss_pred C
Q 007735 315 K 315 (591)
Q Consensus 315 ~ 315 (591)
.
T Consensus 320 ~ 320 (333)
T 1mzy_A 320 W 320 (333)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=363.43 Aligned_cols=239 Identities=17% Similarity=0.233 Sum_probs=199.3
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+...+|+|+|++++. ..+......+++||++|||+||+++||+|+|+|+|+|+++++|||||++++. ++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTT
T ss_pred CcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCc
Confidence 455689999999874 3455555778899999999999999999999999999999999999998864 799999899
Q ss_pred CccCCCCcEEEEEEeCC------------ceeeeEEecCh------hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEE
Q 007735 103 CPIPPKWNWTYQFQVKD------------QVGSFFYFPSL------HFQRASGGFGGFIINNRAIIPIPFDTPDGDITIL 164 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~ 164 (591)
|+|.||++|+|+|++++ ++||||||||. ..|+.+||+|+|||+++... .+|+|++|+
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999953 37999999997 36999999999999997652 238999999
Q ss_pred ecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 165 IGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 165 l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
++|| +|||+.+. ..+.++++.|++|||||+|.+.. .+.||||||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8765 89999862 35889999999999999999975 899999999
Q ss_pred eeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 245 NLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 245 ~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
.|++++ ||.... +..+|++.|.|||++++++++++ .+| .|+++++...... ....+.+.+..
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~H~~-----~GM~g~~~V~~ 265 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKK 265 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCchHhh-----CCCeEEEEEeC
Confidence 999875 665432 45789999999999999999985 578 9999998643221 22345566543
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=375.16 Aligned_cols=267 Identities=19% Similarity=0.198 Sum_probs=206.8
Q ss_pred cCCceEEEEEEEEEEEe--cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG 100 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~ 100 (591)
+...+++|+|++++... .+||.++.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcc
Confidence 45578999999999876 4679999999999999999999999999999999997 346777777766566777655
Q ss_pred -CCCccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEecccccC
Q 007735 101 -TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWYTR 171 (591)
Q Consensus 101 -tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~~~ 171 (591)
++ |.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ .+. .+|+|++|+++|||+.
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeec
Confidence 54 9999999999999 689999999996 479999999999999865422 222 4589999999999984
Q ss_pred ch--HHHH----------HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEE
Q 007735 172 NH--TALR----------KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNF 239 (591)
Q Consensus 172 ~~--~~~~----------~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~ 239 (591)
.+ +.+. ..++. .....++.++|||+..+.| ..+.++|++||+||| +|++..+.+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~~ 248 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTRP 248 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBCE
T ss_pred cccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccce
Confidence 21 1110 00000 0124578999999987442 137899999997765 56665555554
Q ss_pred -EEeCCeeEEEeecCCceeee--eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 240 -RIQNHNLLLAETEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 240 -~i~gh~~~via~DG~~~~p~--~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.|+||.|+|++ ||.+++|. .++++.|++|||+||+|++++ +| +|+++++...... .....|+++|.+..
T Consensus 249 ~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 249 HLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp EETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 46999999998 99998864 468999999999999999996 68 9999998753210 13467899998654
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=366.14 Aligned_cols=241 Identities=16% Similarity=0.206 Sum_probs=197.9
Q ss_pred cccCCceEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
+.+...++++++.++ ..++|. ...++..||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 445567788888764 356764 4566778999999999999999999999999999999999999875 5799999
Q ss_pred CCCCccCCCCcEEEEEEeC------------CceeeeEEecChh------hhhhcCceeeEEEecCCCCCCCCCCCCCcc
Q 007735 100 GTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGDI 161 (591)
Q Consensus 100 ~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~ 161 (591)
.+||+|.||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++... .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 9999999999999999863 3689999999964 4588999999999997652 348999
Q ss_pred eEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE
Q 007735 162 TILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI 241 (591)
Q Consensus 162 ~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 241 (591)
+|+++||+ +||+... ..+.++++.|++|||||+|++.. .+.|+|
T Consensus 157 ~l~~~d~t------------------------~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHl 200 (313)
T 3tas_A 157 TIVFNDMT------------------------INNRPAH-----------TGPDFEATVGDRVEFVMITHGEY-YHTFHL 200 (313)
T ss_dssp EEEEETTE------------------------ETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEE
T ss_pred eeeccchh------------------------cccCCcc-----------cccccccccCCEEEEEEeccccc-ceeeee
Confidence 99999984 4665542 24789999999999999999965 899999
Q ss_pred eCCeeEEEeecCCcee---eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 242 QNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 242 ~gh~~~via~DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
+||.|++++.||.... +..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+..
T Consensus 201 HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~ 271 (313)
T 3tas_A 201 HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKK 271 (313)
T ss_dssp TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEEC
Confidence 9999999999987653 67889999999999999998864 367 8999988643221 23446666654
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=362.44 Aligned_cols=243 Identities=16% Similarity=0.226 Sum_probs=195.9
Q ss_pred hcccCCceEEEEEEEEEEEecCCC-eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCC
Q 007735 20 LCSAADLFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv 98 (591)
..++...+++|++.++... +| ....++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +++||+
T Consensus 22 p~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~ 96 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGT 96 (299)
T ss_dssp -----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCC
T ss_pred CcccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCC
Confidence 4566778899999987644 43 33455667999999999999999999999999999999999999775 679999
Q ss_pred CCCCCccCCCCcEEEEEEeC------------CceeeeEEecChh------hhhhcCceeeEEEecCCCCCCCCCCCCCc
Q 007735 99 LGTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGD 160 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~p~~~~d~e 160 (591)
+.+||+|+||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++... .+|+|
T Consensus 97 ~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 97 LMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred ccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 88999999999999999985 2689999999963 4789999999999987642 34899
Q ss_pred ceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEE
Q 007735 161 ITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFR 240 (591)
Q Consensus 161 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 240 (591)
+++++++|+ +||+.. .+.+.++++.||+|||||+|++.. .+.|+
T Consensus 172 ~~l~~~~~~------------------------~Ng~~~-----------~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfH 215 (299)
T 3t9w_A 172 FTVVFNDMM------------------------INNRAH-----------HDAPTFEANLGERVEWIAIGHGSN-FHTFH 215 (299)
T ss_dssp EEEEEETTE------------------------ETTCCT-----------TCCCEEEEETTCEEEEEEEEESSC-CCEEE
T ss_pred ceeeeeeee------------------------ecCccc-----------cccccceecCCCEEEEEEEecccc-ceeee
Confidence 999998774 677765 235889999999999999999975 68999
Q ss_pred EeCCeeEEEeecCCcee---eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecCC
Q 007735 241 IQNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 241 i~gh~~~via~DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (591)
|+||.|+++..|+.... +...|++.|.||||++++|.+.+ .+| .|.++++...-.+ ....+++.+...
T Consensus 216 lHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 216 LHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp ETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 99999999998887654 34689999999999999998664 367 8999988653221 223456665543
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=371.42 Aligned_cols=268 Identities=17% Similarity=0.168 Sum_probs=206.0
Q ss_pred ccCCceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
.+.+.+++|+|++++...+ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 4566789999999998876 569999999999999999999999999999999998 78999999876544344433
Q ss_pred C-CCCccCCCCcEEEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEeccccc
Q 007735 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWYT 170 (591)
Q Consensus 100 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~~ 170 (591)
. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++|+++||++
T Consensus 110 ~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 3 5 49999999999999 5899999999964 79999999999999865321 222 458999999999998
Q ss_pred C--chHHH----------HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEE
Q 007735 171 R--NHTAL----------RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLN 238 (591)
Q Consensus 171 ~--~~~~~----------~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 238 (591)
. ..+.+ ....+. .....++.++|||+.+.. ...+.+++++||+|||++.|.+.. .+.
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~~~~-~~~ 254 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQANRD-TRP 254 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSC-BCE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCCCCc-cce
Confidence 3 21111 000000 012357899999998621 114889999999888776665433 223
Q ss_pred EEEeCCeeEEEeecCCceee--eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc-cccccCCCcceEEEEEecCCC
Q 007735 239 FRIQNHNLLLAETEGSYTVQ--QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF-VNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 239 ~~i~gh~~~via~DG~~~~p--~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~-~~~~~~~~~~~~ail~y~~~~ 315 (591)
.++++|.|+|++ ||.++++ ..++++.|+||||+||+|++++ +| +|+++++... ... ....++++|.+..
T Consensus 255 ~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~~-----~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 255 HLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAFE-----LGAAGHFKVTGEW 326 (340)
T ss_dssp EEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TSCEEEEEEESCC
T ss_pred EEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHHh-----CCCEEEEEECCCC
Confidence 358999999997 9998864 3579999999999999999997 68 9999998752 211 2356889998654
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=341.79 Aligned_cols=238 Identities=17% Similarity=0.233 Sum_probs=194.0
Q ss_pred CCceEEEEEEEEEEEecCCCeeeE-EEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASPLGVPQQ-VIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~dG~~~~-~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
...+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||++++ .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34679999999874 4553221 2235899999999999999999999999999999999999876 6899999889
Q ss_pred CccCCCCcEEEEEEeCC------------ceeeeEEecCh------hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEE
Q 007735 103 CPIPPKWNWTYQFQVKD------------QVGSFFYFPSL------HFQRASGGFGGFIINNRAIIPIPFDTPDGDITIL 164 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~ 164 (591)
|+|.||++|+|+|++.+ ++||||||||. ..|+.+||+|+|||+++... .+|+|++|+
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 47999999999999987542 247899999
Q ss_pred ecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 165 IGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 165 l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
++|| +|||+..+ +.+.+++++||+|||||+|.+.. .|.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCc
Confidence 9876 78998752 24789999999999999999974 899999999
Q ss_pred eeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeC--CCCCcceEEEEeecccccccCCCcceEEEEEecCC
Q 007735 245 NLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMD--QNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 245 ~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~--~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (591)
.|++++ ||.+.. +...|++.|.|||+++++++++ +.+| .|.++++...... ....+++.+...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999874 676543 3567999999999999999984 3568 8999988643221 234566777644
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=372.43 Aligned_cols=221 Identities=14% Similarity=0.212 Sum_probs=169.0
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-C--------CCccCCCCcEEEEEEeCCc--
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T--------NCPIPPKWNWTYQFQVKDQ-- 120 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~Y~f~~~~~-- 120 (591)
|+++|||+|+|++||+|+|+|+|.|+++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 447999999999999999999999999999999999885 57999997 6 8999999999999999754
Q ss_pred ---ee----eeEEecChh--hhhhcCceeeEEEecCCCCCC--CCCCCCCcceEEec------ccccCchHHHHHHhhcC
Q 007735 121 ---VG----SFFYFPSLH--FQRASGGFGGFIINNRAIIPI--PFDTPDGDITILIG------DWYTRNHTALRKTLDAG 183 (591)
Q Consensus 121 ---~G----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~--p~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~ 183 (591)
+| |||||||.+ .|+.+||+|+|||+++..... ..+..++|++|+++ ||+++............
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~ 220 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS 220 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc
Confidence 57 999999984 799999999999999764321 11234689999999 78887443211000011
Q ss_pred CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCCeeEEEeecCCceeeeeee
Q 007735 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQQNYT 262 (591)
Q Consensus 184 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d 262 (591)
.....++.++|||+.+ +.|.+++++|++|||||+|++... .|.||+|||.|++++.||. .+|
T Consensus 221 ~~~~~~~~~~iNG~~~------------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d 283 (647)
T 1sdd_B 221 EVKNSHEFHAINGMIY------------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLG 283 (647)
T ss_dssp ---CCCEEEEETTBSS------------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EES
T ss_pred chhhcCceeccCCEec------------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccc
Confidence 1123478999999985 137899999999999999999864 8999999999999999863 689
Q ss_pred EEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 263 SLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 263 ~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
++.|+||||+||+|++++ +| .|.++++..
T Consensus 284 ~v~l~pg~r~~v~~~~~~-pG-~w~~hch~~ 312 (647)
T 1sdd_B 284 VWPLLPGSFKTLEMKASK-PG-WWLLDTEVG 312 (647)
T ss_dssp SEEECTTEEEEEEEECCS-SE-EEEEECCCH
T ss_pred eEEECCCeEEEEEEEecc-ce-EeecccCcc
Confidence 999999999999999996 57 898888764
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=347.82 Aligned_cols=215 Identities=14% Similarity=0.197 Sum_probs=159.7
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccC----CCCCCCCCCCC---CCCccCCCCcEEEEEEeC
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ----RRSSWQDGLLG---TNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~----~~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~ 118 (591)
++.+++| ++|||+|+|++||+|+|+|+|.|+++++|||||++. .+.+++||+++ .||+|+||++|+|+|+++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 3446689 689999999999999999999999999999999984 33444444442 279999999999999996
Q ss_pred Cc---------eeeeEEecChhh--hhhcCceeeEEEecCCCC---CCCCCCCCCcceEEecccccCchHHHHHHhhcCC
Q 007735 119 DQ---------VGSFFYFPSLHF--QRASGGFGGFIINNRAII---PIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK 184 (591)
Q Consensus 119 ~~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 184 (591)
++ +||||||||.+. |+.+||+|+|||+++... ..+. ..|+|++|+++||.... +.
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~--------~~-- 196 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESK--------SW-- 196 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTS--------SS--
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEeccccc--------cc--
Confidence 43 479999999765 889999999999987532 1222 45889999999984321 00
Q ss_pred CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 185 GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 185 ~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
....++.++|||+.+ +..|.+++++|++|||||+|+|.. ..+.|+|+||.|++ ||. .+|+
T Consensus 197 ~~~~~~~~~ING~~~-----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dt 257 (306)
T 1sdd_A 197 NQTSSLMYTVNGYVN-----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISA 257 (306)
T ss_dssp SCCCCEEECSSSCCS-----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSC
T ss_pred ccCCCcceeeCCEec-----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----Ecce
Confidence 112467899999986 224789999999999999999986 56789999999985 873 4899
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+.|.||||+||++++++ +| .|+++++..
T Consensus 258 v~l~pger~~v~~~~~~-pG-~~~~hch~~ 285 (306)
T 1sdd_A 258 ITLVSATSTTANMTVSP-EG-RWTIASLIP 285 (306)
T ss_dssp CCEETTCCBC---------C-CCCCBCCST
T ss_pred EEECCCcEEEEEEEcCC-Ce-EEEEEeCCh
Confidence 99999999999999985 67 898888754
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=342.37 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=210.4
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCCCC-C
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
.++.|++++++..... +|....+|+|||++|||+|++++||+++++|+|.++ ..++|||||+. .+||++. +
T Consensus 162 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~ 236 (447)
T 2dv6_A 162 KTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFT 236 (447)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGC
T ss_pred cEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccE
Confidence 4568888887766655 688999999999999999999999999999999986 57899999984 3799886 4
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecCh---hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH----
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT---- 174 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~---- 174 (591)
.|.||++++|.|++ +++||||||||. ..|+.+||+|+|+|+++.. .| .+|+|++++++||++....
T Consensus 237 --~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P--~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 237 --QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP--QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp --CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC--CCSEEEEEEEEEECBSSCTTCCE
T ss_pred --EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC--CCCeeEEEEecccccCCcccccc
Confidence 39999999999999 589999999996 3789999999999998643 22 4588999999999975321
Q ss_pred ----HHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe
Q 007735 175 ----ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (591)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 250 (591)
.+.... ...++.++|||+.+.++ ..+.+++++|++|||||+|++....|.|||+||+|+||+
T Consensus 310 ~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 310 EQEMDYEKLI-----NEKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ECCBBHHHHH-----TTCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred cccCChHHhh-----ccCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 011111 12468999999987432 125799999999999999999888999999999999999
Q ss_pred ecCCceeee--eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 251 TEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 251 ~DG~~~~p~--~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.||.++++. ..|++.|.||||++|+|++++ +| .|+++++...... ....++++|.+..
T Consensus 376 ~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 376 SLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp GGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred cCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 999998754 589999999999999999996 68 9999998764322 3346899997653
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=375.29 Aligned_cols=249 Identities=12% Similarity=0.105 Sum_probs=196.2
Q ss_pred CCceEEEEEEEEEEE--ecCCCe---------------eeEE-E-E-----ECC-----------CCCCCcEEeeCCCEE
Q 007735 24 ADLFVYFDFEVSYIT--ASPLGV---------------PQQV-I-A-----ING-----------KFPGPTINVTTNNNV 68 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~--~~~dG~---------------~~~~-~-~-----~Ng-----------~~pgP~i~v~~Gd~v 68 (591)
...+|+|.+.+++.. .+|+|. -+++ + . |++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 456899999999876 467653 1222 2 2 233 589999999999999
Q ss_pred EEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCC---------ceeeeEEecChhh--hhhcC
Q 007735 69 VVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRASG 137 (591)
Q Consensus 69 ~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 137 (591)
+|+|+|.|+++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999987653 699999999999999999999975 8999999999875 89999
Q ss_pred ceeeEEEecCCCCCC--CCCCCCCcceEEecc------cccCchHHHHHHhhcCC--------CCCCCceEEEcCcCCCC
Q 007735 138 GFGGFIINNRAIIPI--PFDTPDGDITILIGD------WYTRNHTALRKTLDAGK--------GLGMPDGVLINGKGPYQ 201 (591)
Q Consensus 138 l~G~liV~~~~~~~~--p~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~--------~~~~~~~~lING~~~~~ 201 (591)
|+|+|||+++..... ....+++|++|++++ ||++... ..+..... .....+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999764321 112457899888743 6664221 11110000 011245689999975
Q ss_pred CCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC
Q 007735 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ 280 (591)
Q Consensus 202 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~ 280 (591)
+..+.+++++|++|||||+|+|.. ..|.||||||.|+|++.||. .+|++.|.||||++|+|++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 234789999999999999999875 47999999999999999974 689999999999999999995
Q ss_pred CCCcceEEEEeec
Q 007735 281 NASTDYYIVASAR 293 (591)
Q Consensus 281 ~~g~~y~i~~~~~ 293 (591)
+| .|.++++..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 57 888888764
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=342.92 Aligned_cols=215 Identities=15% Similarity=0.180 Sum_probs=168.6
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCC-----CCC-CCCccCCCCcEEEEEEeCCcee-----
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG-----LLG-TNCPIPPKWNWTYQFQVKDQVG----- 122 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~~Y~f~~~~~~G----- 122 (591)
.+|||+||+++||+|+|+|+|.|+++++|||||+++. ++|+|| ++. +||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 567765 555 7999999999999999976554
Q ss_pred ----eeEEecChh--hhhhcCceeeEEEecCCCCC-CC-CCCCCCcceEEec------ccccCchHHHHHHhhcCCCC--
Q 007735 123 ----SFFYFPSLH--FQRASGGFGGFIINNRAIIP-IP-FDTPDGDITILIG------DWYTRNHTALRKTLDAGKGL-- 186 (591)
Q Consensus 123 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~p-~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~~~~-- 186 (591)
|||||||.. .|+++||+|+|||+++.... .+ ....|+|++|+++ +||++. .+..+.......
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999986 47899999999999875321 11 1245899999995 465532 222221110000
Q ss_pred C------CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeee
Q 007735 187 G------MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQ 259 (591)
Q Consensus 187 ~------~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~ 259 (591)
. ....++|||+.+ +..+ +.+++||+|||||+|+|.. ..|.|||+||+|+|+ +.
T Consensus 605 ~~~~~~~~~~~~~ING~~~-----------~~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~ 664 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVF-----------DSLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MV 664 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCS-----------SCCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SS
T ss_pred ccccccccCceeeecCcCC-----------CCCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cc
Confidence 0 013579999985 1224 8999999999999998764 468999999999986 46
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
.+|++.|.||||++|+|++++ +| .|.++++..
T Consensus 665 ~~Dtv~l~Pg~~~~v~~~ad~-pG-~w~~hcH~~ 696 (742)
T 2r7e_A 665 YEDTLTLFPFSGETVFMSMEN-PG-LWILGCHNS 696 (742)
T ss_dssp SBCSSCCCCCSSEECCEECCC-CC-CSCCEECCC
T ss_pred ceeEEEECCCcEEEEEEEcCC-Ce-EEEEEeCCc
Confidence 789999999999999999995 58 899998865
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=248.24 Aligned_cols=225 Identities=13% Similarity=0.114 Sum_probs=154.0
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
.|+|++++|+++|+||+|.... .+.++.||..+. ++.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4899999999999999999865 556888888776 68999874 23468999999999999764
Q ss_pred -CCcceEEEEeeccc----ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCC
Q 007735 282 -ASTDYYIVASARFV----NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ 356 (591)
Q Consensus 282 -~g~~y~i~~~~~~~----~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 356 (591)
+| .||.+.+.... .+ ....+.+.-|++..+..
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~-~~~Gl~G~~iV~~~~~~----------------------------------------- 185 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGG-IRNGLYGPVIVRRKGDV----------------------------------------- 185 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHH-HHHTCEEEEEEECTTCC-----------------------------------------
T ss_pred Cce-EEEEecCccccccchhh-hhcCCeEEEEEecCCCC-----------------------------------------
Confidence 23 45455442110 00 00112222233221100
Q ss_pred CCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccC
Q 007735 357 GSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436 (591)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~ 436 (591)
..++++.+... .|+|||+.|. . ...+.++.
T Consensus 186 --------~pd~e~~l~~~---------d~~iNG~~~~--~-------------------------------~~~l~v~~ 215 (343)
T 3cg8_A 186 --------LPDATHTIVFN---------DMTINNRKPH--T-------------------------------GPDFEATV 215 (343)
T ss_dssp --------CCSEEEEEEEE---------TTEETTCCTT--C-------------------------------CCCEEEET
T ss_pred --------CCCceEEEEcc---------cceecccCCC--C-------------------------------CccEEeCC
Confidence 01133333221 2689987642 1 12356788
Q ss_pred CcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe---CCccceeee
Q 007735 437 RGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL---DNVGIWNLR 513 (591)
Q Consensus 437 g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a---dNpG~W~~H 513 (591)
|++|+|+|.|.+.+.||||||||.|+|++. |.+.. ....+.++||+.|+||+++.++|++ ||||.|+||
T Consensus 216 Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 216 GDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 999999999998899999999999999743 32211 1123578999999999999999995 899999999
Q ss_pred cccccchhccceEEEEEecCCCCCCCCCCCCCCccccc
Q 007735 514 TENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCG 551 (591)
Q Consensus 514 CHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~ 551 (591)
||+++|++.|||..++|.+++. .+|...+.|-
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~------~~P~y~~~~~ 319 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDG------TIPGYEPHEH 319 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS------CCSCC-----
T ss_pred CCCHHHHhccCcEEEEEecCCC------CCCCCCCCCc
Confidence 9999999999999999987653 2355555543
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=242.90 Aligned_cols=233 Identities=15% Similarity=0.139 Sum_probs=162.2
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
...+++||+.. .|+|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999974 3899999999999999999765 6889999975 457899764 23456899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|+++++.++++ .+| .||.+++......-....+ .+.+.+.... . .+.. +.++.+ .+..
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~~~~Gl--~G~liV~~~~-----~---~~~~--d~e~~l--------~~~d 171 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPHIAKGL--YGGFIVEPKE-----G---RPPA--DDEMVM--------VMNG 171 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHHHHTTC--EEEEEEECSS-----C---CCCC--SEEEEE--------EEEE
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHHHhCcC--eEEEEEeCCc-----c---CCCC--cceEEE--------EEee
Confidence 99999999996 678 9999987642100000112 2333332211 0 0110 111110 0000
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
+ ... .......|+|||+.|...
T Consensus 172 ---------------------~--~~~---~g~~~~~~~iNG~~~~~~-------------------------------- 193 (288)
T 3gdc_A 172 ---------------------Y--NTD---GGDDNEFYSVNGLPFHFM-------------------------------- 193 (288)
T ss_dssp ---------------------E--CCS---STTCCSEEEETTSTTHHH--------------------------------
T ss_pred ---------------------E--ecC---CCCCcceEEECccccccc--------------------------------
Confidence 0 000 001123689999876310
Q ss_pred eEEEeccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 429 TSVINGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
...+.++.|++|+|.|.|.+. ..|||||||+.|+|++.+.. +..|.++||+.|+||+++.|+|++++
T Consensus 194 ~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~ 262 (288)
T 3gdc_A 194 DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPY 262 (288)
T ss_dssp HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCS
T ss_pred CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCC
Confidence 011356789999999999875 36999999999999874321 22368999999999999999999999
Q ss_pred ccceeeecccccchhccceEEEEEec
Q 007735 507 VGIWNLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 507 pG~W~~HCHil~H~~~GM~~~~~V~~ 532 (591)
||.|+||||+++|++.|||..++|.+
T Consensus 263 pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 263 PGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp CEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999864
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=243.37 Aligned_cols=246 Identities=17% Similarity=0.181 Sum_probs=162.8
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEee---cCCceeeeeeeEEEE
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET---EGSYTVQQNYTSLDI 266 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~v~i 266 (591)
..+++||+.. .|+|++++|+++|+||+|.... . .+||.|-+.+.+. ||.+. ++...|
T Consensus 24 ~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~--~siH~HG~~~~~~~~~DGvp~----vtq~~I 83 (339)
T 2zwn_A 24 KVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-P--HTIHWHGVHQKGTWRSDGVPG----VTQQPI 83 (339)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-C--BCCEEETCCCTTCGGGSCCBT----TTBCCB
T ss_pred EEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-C--ccEEeCCCCcCCCcccCCCCc----cccCcc
Confidence 5799999964 3999999999999999999865 3 3555555666664 99863 334579
Q ss_pred ccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccc
Q 007735 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNV 346 (591)
Q Consensus 267 ~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l 346 (591)
.|||||++.++++ .+| +||++++.....+.....+.+ +++... .. + .+++..... +....+.+ |..
T Consensus 84 ~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G-~liV~p-~~-~--~~~~~~~d~--e~~l~l~d-----~~~ 149 (339)
T 2zwn_A 84 EAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWG-PLIVDP-KQ-P--LPIEKRVTK--DVIMMMST-----WES 149 (339)
T ss_dssp CTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEE-EEEEEC-SS-C--CTTGGGCSE--EEEEEEEE-----ECG
T ss_pred CCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceE-eEEecC-CC-c--ccccccCCc--eEEEEeeh-----eec
Confidence 9999999999997 578 999998764311110011222 233222 11 0 111110000 11111111 111
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCC
Q 007735 347 SASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPR 426 (591)
Q Consensus 347 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~ 426 (591)
... ..+...+ . .......|.|||+.+..
T Consensus 150 ~~~-~~~~~~g----------------~----~~~~~~~~~ING~~~~~------------------------------- 177 (339)
T 2zwn_A 150 AVA-DKYGEGG----------------T----PMNVADYFSVNAKSFPL------------------------------- 177 (339)
T ss_dssp GGT-TCTTCCC----------------S----TTSCCCEEEETTBCTTS-------------------------------
T ss_pred ccc-cccCCCC----------------C----CccccceEEEccccCCC-------------------------------
Confidence 000 0000000 0 00112368899976521
Q ss_pred cceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 427 METSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 427 ~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
+..+.++.|++++|.|.|.+...||||||||+|+|++.+++. +.+|.++||+.|+||+++.|+|++||
T Consensus 178 --~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~ 245 (339)
T 2zwn_A 178 --TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADN 245 (339)
T ss_dssp --SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCS
T ss_pred --cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCC
Confidence 112456789999999999988899999999999999996432 22378899999999999999999999
Q ss_pred ccceeeecccccc------hhccceEEEEEecC
Q 007735 507 VGIWNLRTENLDS------WYLGQETYVRVVNP 533 (591)
Q Consensus 507 pG~W~~HCHil~H------~~~GM~~~~~V~~p 533 (591)
||.|+||||+++| ...||+..+++...
T Consensus 246 pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 246 PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999 78999999988643
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=238.20 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=165.5
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|+.|.... .+.+|+||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5899999874 3999999999999999998755 6788899876542 36799763 23357899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|++++..++++ .+| .||.+++.....+.....+.+ +++. .... ..+++. .. +.+..+. .. .|....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~~Gl~G-~lIV-~~~~---~~~~~~--~~--d~e~~l~-l~--dw~~~~ 150 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTMRGMWG-PLIV-EPKN---PLPIEK--TV--TKDYILM-LS--DWVSSW 150 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHHSCCEE-EEEE-ECSS---CCHHHH--TC--CEEEEEE-EE--EECGGG
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhccCCCEE-EEEE-cCCC---cccccc--cc--cceeEEE-EE--eecccc
Confidence 99999999997 568 999988764211100011222 2332 2211 000000 00 1111110 00 011100
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
.. .....+ . ..+....|.|||+.|..
T Consensus 151 ~~-~~~~~~-----------------~---~~~~~d~~~ING~~~~~--------------------------------- 176 (318)
T 3g5w_A 151 AN-KPGEGG-----------------I---PGDVFDYYTINAKSFPE--------------------------------- 176 (318)
T ss_dssp TT-CTTCCC-----------------C---TTCCCCEEEETTBCBTS---------------------------------
T ss_pred cc-ccccCC-----------------C---CCCcCcEEEEcCcCCCC---------------------------------
Confidence 00 000000 0 00112358999987521
Q ss_pred eEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 429 TSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
+..+.++.|++|+|.|.|.+...||||||||.|+|++++++. +.+|.++||+.|.||+++.|+|++||||
T Consensus 177 ~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG 246 (318)
T 3g5w_A 177 TQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPG 246 (318)
T ss_dssp SCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCS
T ss_pred CccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCe
Confidence 012456789999999999988899999999999999986432 2247799999999999999999999999
Q ss_pred ceeeecccccchh------ccceEEEEEecCC
Q 007735 509 IWNLRTENLDSWY------LGQETYVRVVNPE 534 (591)
Q Consensus 509 ~W~~HCHil~H~~------~GM~~~~~V~~p~ 534 (591)
.|+||||+++|++ .|||..++|...+
T Consensus 247 ~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 247 LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999998 5889999886543
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-26 Score=227.97 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=153.3
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
-|+|+++.|+++++++.|... ....+|.||..+.- +.||..+ ..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 499999999999999999864 47788999987654 6799762 23468999999999999763
Q ss_pred -CCcceEEEEeeccc----ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCC
Q 007735 282 -ASTDYYIVASARFV----NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ 356 (591)
Q Consensus 282 -~g~~y~i~~~~~~~----~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 356 (591)
+| .||.+.+.... .+. ...+.+.-|+. . .. .+
T Consensus 108 ~~g-t~~YH~h~~~~~~~~~~~-~~Gl~G~liV~-~-~~---------~~------------------------------ 144 (276)
T 3kw8_A 108 SAG-YWHYHDHVVGTEHGTGGI-RNGLYGPVIVR-R-KG---------DV------------------------------ 144 (276)
T ss_dssp SCE-EEEEECSSSSSTTCHHHH-HHTCEEEEEEE-C-TT---------CC------------------------------
T ss_pred CCE-EEEEecCccccccchhhh-hCccEEEEEEe-c-CC---------Cc------------------------------
Confidence 34 67777654321 000 00122211221 1 00 00
Q ss_pred CCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccC
Q 007735 357 GSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436 (591)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~ 436 (591)
..++++.+.+. .|+|||+.|.. ...+.++.
T Consensus 145 --------~~drE~~l~l~---------~~~iNG~~~~~---------------------------------~p~i~v~~ 174 (276)
T 3kw8_A 145 --------LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATV 174 (276)
T ss_dssp --------CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEET
T ss_pred --------ccccceEEEec---------ccccceecccC---------------------------------CCCEEEec
Confidence 01234443321 27899987631 12246788
Q ss_pred CcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC---Cccceeee
Q 007735 437 RGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD---NVGIWNLR 513 (591)
Q Consensus 437 g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad---NpG~W~~H 513 (591)
|++|+|+|.|.+.+.|||||||+.|+|++. |.+... ...+.+|||+.|.|+++..++|+++ |||.|+||
T Consensus 175 G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~H 246 (276)
T 3kw8_A 175 GDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 246 (276)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEEEEecCCCcceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEE
Confidence 999999999998899999999999999763 333211 1125689999999999999999997 89999999
Q ss_pred cccccchhccceEEEEEecCCC
Q 007735 514 TENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 514 CHil~H~~~GM~~~~~V~~p~~ 535 (591)
||+++|++.|||..++|.+++.
T Consensus 247 CH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 247 CHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999998864
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-25 Score=227.95 Aligned_cols=216 Identities=12% Similarity=0.125 Sum_probs=147.0
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC------------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ------------ 280 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~------------ 280 (591)
-|+|++++|++++++|.|.... ..+++.+|..+. -+.||.++. .-.|.|||.+...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 4999999999999999998755 677888887654 367997642 124789999998888763
Q ss_pred CCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCC
Q 007735 281 NASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQG 357 (591)
Q Consensus 281 ~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 357 (591)
.+| .||.+.+....... ....+.+.-|++ . ..
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~-~-~~------------------------------------------ 164 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVR-R-QG------------------------------------------ 164 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE-C-TT------------------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEe-c-cc------------------------------------------
Confidence 234 56655543211000 000011111111 0 00
Q ss_pred CCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCC
Q 007735 358 SFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437 (591)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 437 (591)
....++++.+.+. .|.+|+..+. + ...+.++.|
T Consensus 165 -----~~~~d~e~~l~~~---------~~~~Ng~~~~--~-------------------------------~p~l~v~~G 197 (299)
T 3t9w_A 165 -----DLLPKRQFTVVFN---------DMMINNRAHH--D-------------------------------APTFEANLG 197 (299)
T ss_dssp -----CCCCSEEEEEEEE---------TTEETTCCTT--C-------------------------------CCEEEEETT
T ss_pred -----ccCccccceeeee---------eeeecCcccc--c-------------------------------cccceecCC
Confidence 0112344544431 3678876542 1 123456789
Q ss_pred cEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEE---EEEEEeCCccceeeec
Q 007735 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT---AILVSLDNVGIWNLRT 514 (591)
Q Consensus 438 ~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~---~irf~adNpG~W~~HC 514 (591)
++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|+... +++|++||||.|+|||
T Consensus 198 e~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HC 269 (299)
T 3t9w_A 198 ERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHC 269 (299)
T ss_dssp CEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEc
Confidence 9999999999989999999999999987754322 2233568999999998754 4555678999999999
Q ss_pred ccccchhccceEEEEEecCCC
Q 007735 515 ENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~~p~~ 535 (591)
|+++|++.|||..|+|.+++.
T Consensus 270 Hi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 270 HVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp CSHHHHHTTCEEEEEEECTTS
T ss_pred CCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999987754
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.3e-25 Score=224.91 Aligned_cols=217 Identities=12% Similarity=0.107 Sum_probs=148.1
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
-|+|+++.|++++++|.|.... ..++|.||..+. .+.||.... .-.|.||+++...+++..+
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 4899999999999999998754 677888887654 256887532 1247899999988877633
Q ss_pred -CCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCC
Q 007735 282 -ASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQG 357 (591)
Q Consensus 282 -~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 357 (591)
.| .||.+.+.....+. ....+.+.-|++ .. +
T Consensus 114 ~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~------------------------------------------~ 148 (313)
T 3tas_A 114 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RK------------------------------------------G 148 (313)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE--CT------------------------------------------T
T ss_pred Cce-EEEEeecCcccccchhhhhccccCceEee--cc------------------------------------------c
Confidence 23 45555443211000 000011111111 00 0
Q ss_pred CCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCC
Q 007735 358 SFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437 (591)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 437 (591)
....++++.+.+. .|++|+..+.. ...+.++.|
T Consensus 149 -----~~~~d~e~~l~~~---------d~t~Ng~~~~~---------------------------------~~~l~v~~G 181 (313)
T 3tas_A 149 -----DVLPDRTHTIVFN---------DMTINNRPAHT---------------------------------GPDFEATVG 181 (313)
T ss_dssp -----CBCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETT
T ss_pred -----cccccccceeecc---------chhcccCCccc---------------------------------ccccccccC
Confidence 0112344444431 27788765421 112456789
Q ss_pred cEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEE---eCCccceeeec
Q 007735 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS---LDNVGIWNLRT 514 (591)
Q Consensus 438 ~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~---adNpG~W~~HC 514 (591)
++|+|+|.|.+.+.||||||||.|+|+..+... .....+.++||+.|.|++...+++. ++|||.|+|||
T Consensus 182 e~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HC 253 (313)
T 3tas_A 182 DRVEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHC 253 (313)
T ss_dssp CEEEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEe
Confidence 999999999998999999999999998775321 1123478999999999988777775 46999999999
Q ss_pred ccccchhccceEEEEEecCCCC
Q 007735 515 ENLDSWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~~p~~~ 536 (591)
|+++|++.|||..|+|..++..
T Consensus 254 Hi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 254 HVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp CSHHHHHTTCEEEEEEECTTCC
T ss_pred CChHHHHCCCeEEEEEECCCCC
Confidence 9999999999999999988764
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-23 Score=211.45 Aligned_cols=228 Identities=12% Similarity=0.121 Sum_probs=131.9
Q ss_pred eeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeCCCCC------
Q 007735 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMDQNAS------ 283 (591)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~~~~g------ 283 (591)
|+|++++|+++|+||.|... ..+.+|.||..+. .+.||.+.. +...+...|.||||++..+++++.+|
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 99999999999999999764 4677888887743 267887752 12223467899999999999976532
Q ss_pred --cceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCc
Q 007735 284 --TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRY 361 (591)
Q Consensus 284 --~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~ 361 (591)
..||.+++.....+. ...+.+ ++|.+...... ..+.+ +.. +.+ +...+..
T Consensus 138 ~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~~-~~~~~--~~~--d~e--------~~l~~~d------------- 189 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTLT-EDGTQ--KMF--EKQ--------HVLMFAV------------- 189 (306)
T ss_dssp SEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCBC-TTSSB--SSS--CCC--------CCCBCCE-------------
T ss_pred CceEEEEeccCCchhhh-ccCceE-EEEEccCCCCC-ccCCc--Ccc--cce--------EEEEEEe-------------
Confidence 389999875321110 011333 44444321100 00000 000 100 0000000
Q ss_pred CccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEE
Q 007735 362 GSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFME 441 (591)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve 441 (591)
+ .....+.......|.|||..|.. .| .+.++.|++++
T Consensus 190 --------~--d~~~~~~~~~~~~~~ING~~~~~--~p-------------------------------~l~v~~G~~vr 226 (306)
T 1sdd_A 190 --------F--DESKSWNQTSSLMYTVNGYVNGT--MP-------------------------------DITVCAHDHIS 226 (306)
T ss_dssp --------E--ETTSSSSCCCCEEECSSSCCSSC--CC-------------------------------CCCCCCC----
T ss_pred --------c--ccccccccCCCcceeeCCEecCC--Cc-------------------------------ceEEcCCCEEE
Confidence 0 00000001112357888876521 11 13456799999
Q ss_pred EEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccc
Q 007735 442 VILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDS 519 (591)
Q Consensus 442 ~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H 519 (591)
|.|.|.+. ..|+||+||+.|++ .| .++||+.|.||+.+.++|.+++||.|+||||+++|
T Consensus 227 lrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H 287 (306)
T 1sdd_A 227 WHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRH 287 (306)
T ss_dssp --BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTT
T ss_pred EEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHH
Confidence 99999875 47999999999976 12 35999999999999999999999999999999999
Q ss_pred hhccceEEEEEecC
Q 007735 520 WYLGQETYVRVVNP 533 (591)
Q Consensus 520 ~~~GM~~~~~V~~p 533 (591)
++.|||..++|.+.
T Consensus 288 ~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 288 FQAGMQAYIDIKNC 301 (306)
T ss_dssp GGGTCBCCC-----
T ss_pred HhcCCeEEEEEecC
Confidence 99999999998743
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=212.64 Aligned_cols=246 Identities=13% Similarity=0.184 Sum_probs=145.9
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee----eeeeEEEEccccEEEEEEEeCCCCC----c
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ----QNYTSLDIHVGQSYSFLVTMDQNAS----T 284 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p----~~~d~v~i~pGqR~dvlv~~~~~~g----~ 284 (591)
.|+|++++|+++++||.|.... .+.+|.||.... .+.||.+... ..+....|.|||+++..+++++..| +
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 3999999999999999999764 567888887654 5789977421 1223557999999999999987532 3
Q ss_pred ----ceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccc-cccccccCCCCCCCCCCC
Q 007735 285 ----DYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARS-IRWNVSASGARPNPQGSF 359 (591)
Q Consensus 285 ----~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~-~~~~l~~~~~~p~p~~~~ 359 (591)
.||.+.+.....+. ...+.+ ++|........... ..|....+....+.+... ..|.+.. +..
T Consensus 146 ~~c~T~wYHsH~~~~~q~-~~GL~G-~lIV~~~~~~~~~~---~~~~~~~e~~l~l~~~d~~~~w~~~~-----~~~--- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDI-HSGLIG-PLLICRKGTLDKET---NMPVDMREFVLLFMVFDEKKSWYYDK-----KPT--- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHH-TTTCEE-EEEEECTTSSCTTS---CCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCceEEEEccCCCCcccc-cccCcc-CEEEeeCCCccccc---CCCCcceeEEEEEEeecCcccccccc-----Ccc---
Confidence 79999887421110 011333 33333322111000 011110011111110000 0011100 000
Q ss_pred CcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcE
Q 007735 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGF 439 (591)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ 439 (591)
..+.... .. .......+.|||..|. .| .+.++.|++
T Consensus 213 --------~~~~~~~-~~-~~~~~~~~~iNG~~~~---~p-------------------------------~l~v~~G~~ 248 (647)
T 1sdd_B 213 --------RSWRRAS-SE-VKNSHEFHAINGMIYN---LP-------------------------------GLRMYEQEW 248 (647)
T ss_dssp ---------------------CCCEEEEETTBSSC---CC-------------------------------CCEEETTCE
T ss_pred --------cccccCC-cc-hhhcCceeccCCEecC---CC-------------------------------CeEEcCCCE
Confidence 0000000 00 0111346888988651 11 134567999
Q ss_pred EEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccc
Q 007735 440 MEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENL 517 (591)
Q Consensus 440 ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil 517 (591)
|+|.|.|.+. +.||||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||++
T Consensus 249 vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~ 312 (647)
T 1sdd_B 249 VRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVG 312 (647)
T ss_dssp EEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCH
T ss_pred EEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcc
Confidence 9999999874 489999999999998642 4579999999999999999999999999999999
Q ss_pred cchhccceEEEEEecC
Q 007735 518 DSWYLGQETYVRVVNP 533 (591)
Q Consensus 518 ~H~~~GM~~~~~V~~p 533 (591)
+|++.|||..+.|.++
T Consensus 313 ~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 313 EIQRAGMQTPFLIVDR 328 (647)
T ss_dssp HHHTTTCEEEEEEECT
T ss_pred cccccccccceeeecc
Confidence 9999999999999743
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=189.52 Aligned_cols=248 Identities=17% Similarity=0.145 Sum_probs=161.4
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|++|.... ..+.+++||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5799999864 3899999999999999999753 46788888863 5788642 124899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
||++++.+++++ +| .||.+++......-....+.+ +++.+. .. ++| .. |....+-. . +|....
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p---~~--d~e~~l~~-~--d~~~~~ 178 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLP---KV--DKEFYIVQ-G--DFYTKG 178 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCC---CC--SEEEEEEE-E--EECBSS
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCC---CC--ceEEEEEe-e--eeeccC
Confidence 999999999986 68 999998653210000011222 333333 11 122 11 21111110 0 011110
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
. ....+ ....+ +.... ... ...+.|||+.+... .
T Consensus 179 ~---~~~~g-----~~~~~----~~~~~--~~~-~~~~~iNG~~~~~~-------------------------------~ 212 (327)
T 1kbv_A 179 K---KGAQG-----LQPFD----MDKAV--AEQ-PEYVVFNGHVGALT-------------------------------G 212 (327)
T ss_dssp C---TTCCE-----EECBC----HHHHH--HTC-CSEEEETTSTTTTS-------------------------------G
T ss_pred c---ccccc-----ccccC----hhHhc--cCC-CceEEEcCcccCCC-------------------------------C
Confidence 0 00000 00000 00000 011 23578888765210 0
Q ss_pred eEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCc
Q 007735 429 TSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNp 507 (591)
...+.++.|++++|.|.|.+ ...|+||||||.|+||+.+++. .+|.++||+.|.||+.+.|.|++++|
T Consensus 213 ~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~p 281 (327)
T 1kbv_A 213 DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIP 281 (327)
T ss_dssp GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSC
T ss_pred ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCC
Confidence 12346678999999999986 4689999999999999997542 12678999999999999999999999
Q ss_pred cceeeecccccch-hccceEEEEEecCC
Q 007735 508 GIWNLRTENLDSW-YLGQETYVRVVNPE 534 (591)
Q Consensus 508 G~W~~HCHil~H~-~~GM~~~~~V~~p~ 534 (591)
|.|.||||+.+|. ..||+..++|....
T Consensus 282 G~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 282 GNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred eEEEEEeccccccccCCcEEEEEECCCC
Confidence 9999999999995 88999999997543
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-19 Score=185.91 Aligned_cols=261 Identities=13% Similarity=0.178 Sum_probs=155.7
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~ 267 (591)
...+++||+.. .|+|++++|+++|+|+.|.... ..|.++++++.. +.||..+ + .|.
T Consensus 59 ~~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~ 115 (340)
T 2bw4_A 59 IHAMTFNGSVP-------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVN 115 (340)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBC
T ss_pred EEEEEECCCCC-------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeC
Confidence 35799999853 3899999999999999998732 356677776542 2344332 1 399
Q ss_pred cccEEEEEEEeCCCCCcceEEEEeeccc--ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccc
Q 007735 268 VGQSYSFLVTMDQNASTDYYIVASARFV--NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWN 345 (591)
Q Consensus 268 pGqR~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 345 (591)
|||++++.+++++ +| .||.+++.... .+. ...+.+ +++.+.....+ ...+. |. .++.+..+. .. .|.
T Consensus 116 PG~~~~y~~~~~~-~G-t~wyH~h~~~~~~~~~-~~Gl~G-~~iV~~~~~~~--~~~~~-p~-~~d~e~~l~-l~--D~~ 184 (340)
T 2bw4_A 116 PGEETTLRFKATK-PG-VFVYHCAPEGMVPWHV-TSGMNG-AIMVLPRDGLK--DEKGQ-PL-TYDKIYYVG-EQ--DFY 184 (340)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEE-EEEEECTBCEE--CTTSC-EE-CCSEEEEEE-EE--EEC
T ss_pred CCCEEEEEEECCC-Ce-EEEEEcCCCCchhhHH-hCcCEE-EEEEccCcCcc--cccCC-Cc-CcceeEEEe-ee--eee
Confidence 9999999999985 78 99999986421 010 011333 33333211100 00110 10 012111110 00 011
Q ss_pred cccCCCCCCCCCCCC-cCcc-c-eeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCC
Q 007735 346 VSASGARPNPQGSFR-YGSI-N-VTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVT 422 (591)
Q Consensus 346 l~~~~~~p~p~~~~~-~~~~-~-~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 422 (591)
+. ..+.+.+. +... . .... +... .......|.|||+.|....
T Consensus 185 ~~-----~~~~g~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~iNG~~~~~~~------------------------- 229 (340)
T 2bw4_A 185 VP-----KDEAGNYKKYETPGEAYEDA--VKAM---RTLTPTHIVFNGAVGALTG------------------------- 229 (340)
T ss_dssp CC-----BCTTSCBCCCCSHHHHHHHH--HHHH---HTTCCSEEEETTSTTTTSG-------------------------
T ss_pred ec-----cccCCcccccccccccccch--hhHh---hcCCCCEEEECCccCCccC-------------------------
Confidence 10 00011000 0000 0 0000 0000 0001235888988753110
Q ss_pred CCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceEEeCCCcEEEEE
Q 007735 423 GPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTTQVYPGAWTAIL 501 (591)
Q Consensus 423 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv~Vpp~g~~~ir 501 (591)
...+.++.|++++|++.|.+...|++|+|||.|+|+. + |.+. ..|. +.||+.|.||+.+.|.
T Consensus 230 ------~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 230 ------DHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA-T-GKFR---------NPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp ------GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESCCCBCTTEEEEEE
T ss_pred ------CCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC-C-Cccc---------CCccccceEEEeCCCceEEEE
Confidence 1224567789999988887778899999999999986 2 3221 1122 4799999999999999
Q ss_pred EEeCCccceeeecccc-cchhccceEEEEEecCCC
Q 007735 502 VSLDNVGIWNLRTENL-DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 502 f~adNpG~W~~HCHil-~H~~~GM~~~~~V~~p~~ 535 (591)
|.+++||.|+||||++ +|++.|||..++|..+..
T Consensus 293 v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 293 YTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9999999999999999 699999999999986543
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-21 Score=217.86 Aligned_cols=243 Identities=12% Similarity=0.169 Sum_probs=148.2
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC---------CCC
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ---------NAS 283 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~---------~~g 283 (591)
-|+|+++.|++++++|.|.... .+.+|.||..+.--.-||.+- ..-.|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 4999999999999999999754 677888887665444358642 1236899999999999875 456
Q ss_pred cceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccc--cccc-cccccccC--CCCCCCCCC
Q 007735 284 TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMN--QARS-IRWNVSAS--GARPNPQGS 358 (591)
Q Consensus 284 ~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~--~~~~-~~~~l~~~--~~~p~p~~~ 358 (591)
.||.+.+.....+. ...+.+ ++|........... ..+.. +.+..+- .... -.|-+... ...+.|..
T Consensus 272 -t~wYHsh~~~~~q~-~~GL~G-~liV~~~~~~~~~~---~~~~~--d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~- 342 (770)
T 2r7e_B 272 -AWAYSSDVDLEKDV-HSGLIG-PLLVCHTNTLNPAH---GRQVT--VQEFALFFTIFDETKSWYFTENMERNCRAPCN- 342 (770)
T ss_dssp -EEEECCCSSSSHHH-HTSCCE-EEEEECSTTSCSSS---CCCCS--SEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-
T ss_pred -eEEeeccCCcHHHH-hCCcee-eEEECCCccccccc---CCCcc--ceEEEEEEeecCccccchhccchhhcccCccc-
Confidence 89988776432110 011222 23332211100000 00000 1111000 0000 00000000 00000100
Q ss_pred CCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCc
Q 007735 359 FRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438 (591)
Q Consensus 359 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~ 438 (591)
... .... .......|+|||..|. ....+.++.|+
T Consensus 343 -----~~~-------~d~~-~~~~~~~~~ING~~~~---------------------------------~~~~l~v~~Ge 376 (770)
T 2r7e_B 343 -----IQM-------EDPT-FKENYRFHAINGYIMD---------------------------------TLPGLVMAQDQ 376 (770)
T ss_dssp -----CCS-------SSSS-STTTSCEECTTSCTTT---------------------------------TCCCCCCCSSS
T ss_pred -----ccc-------CCcc-ccccCCccccCCccCC---------------------------------CCCCeEEeCCC
Confidence 000 0000 0111224667776541 11223567899
Q ss_pred EEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeeccc
Q 007735 439 FMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTEN 516 (591)
Q Consensus 439 ~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHi 516 (591)
+|+|.|.|.+. ..||||||||.|+|++.+ +.++||+.|+||+++.|+|++||||.|+||||+
T Consensus 377 ~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~ 440 (770)
T 2r7e_B 377 RIRWYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECLI 440 (770)
T ss_dssp CEEEECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCCS
T ss_pred EEEEEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEecc
Confidence 99999999874 389999999999998764 137999999999999999999999999999999
Q ss_pred ccchhccceEEEEEec
Q 007735 517 LDSWYLGQETYVRVVN 532 (591)
Q Consensus 517 l~H~~~GM~~~~~V~~ 532 (591)
++|++.|||..++|..
T Consensus 441 ~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 441 GEHLHAGMSTLFLVYS 456 (770)
T ss_dssp HHHHTTBCCCCCCBCC
T ss_pred cccccccccccccccc
Confidence 9999999999999853
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=173.48 Aligned_cols=263 Identities=12% Similarity=0.086 Sum_probs=149.1
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~ 267 (591)
...+++||+.. .|+|++++|+++++|+.|.+.. ..|.++++++. ..||.. +. + .|.
T Consensus 52 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~ 108 (333)
T 1mzy_A 52 LQAMTFDGSIP-------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LIN 108 (333)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBC
T ss_pred EEEEEECCccC-------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeC
Confidence 35789999864 3899999999999999998542 13344444432 123221 11 1 389
Q ss_pred cccEEEEEEEeCCCCCcceEEEEeecc--c-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccc
Q 007735 268 VGQSYSFLVTMDQNASTDYYIVASARF--V-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRW 344 (591)
Q Consensus 268 pGqR~dvlv~~~~~~g~~y~i~~~~~~--~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 344 (591)
||+++++.+++++ +| .||.+++... . .+. ...+.+.-|++ .....+ .+.. .|. .+|.+..+. ..+ |
T Consensus 109 PG~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~~-~~Gl~G~~iV~-~~~~~~--~~~~-~p~-~~d~e~~l~-l~D--~ 177 (333)
T 1mzy_A 109 PGEKVVLRFKATR-AG-AFVYHCAPGGPMIPWHV-VSGMAGCIMVL-PRDGLK--DHEG-KPV-RYDTVYYIG-ESD--H 177 (333)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCSTTHHHHHH-HTTCEEEEEEE-CTTCCB--CTTS-CBC-CCSEEEEEE-EEE--E
T ss_pred CCCEEEEEEECCC-CE-EEEEeecCCcccchhhh-hCCCEEEEEEc-cCcCcc--cccc-CCC-ccchheeee-eee--e
Confidence 9999999999985 78 9999997641 0 010 01133333333 211100 0111 111 112121110 011 1
Q ss_pred ccccCCCCCCCCCCCC-cCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 345 NVSASGARPNPQGSFR-YGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 345 ~l~~~~~~p~p~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
.+.. ...+.+. +....-...-.+... .......|.|||+.+..+.
T Consensus 178 ~~~~-----~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ING~~~~~~~-------------------------- 223 (333)
T 1mzy_A 178 YIPK-----DEDGTYMRFSDPSEGYEDMVAVM---DTLIPSHIVFNGAVGALTG-------------------------- 223 (333)
T ss_dssp CCCB-----CTTSCBCCCSSHHHHHHHHHHHH---TTTCCSEEEETTSTTTTSG--------------------------
T ss_pred ccCc-----cccccccccccccccccchhHHh---hccCCcEEEECCcccccCC--------------------------
Confidence 1100 0000000 000000000000000 0011235888987642110
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceEEeCCCcEEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTTQVYPGAWTAILV 502 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv~Vpp~g~~~irf 502 (591)
...+.++.|++++|++.|.....|++++|||.|+|++ + |.+.. .|. ++||+.|.||+.+.+.|
T Consensus 224 -----~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v 287 (333)
T 1mzy_A 224 -----EGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALY 287 (333)
T ss_dssp -----GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEE
T ss_pred -----CcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEE
Confidence 1124567789998887776555555567889999987 3 43211 122 58999999999999999
Q ss_pred EeCCccceeeecccccch-hccceEEEEEecCCC
Q 007735 503 SLDNVGIWNLRTENLDSW-YLGQETYVRVVNPEA 535 (591)
Q Consensus 503 ~adNpG~W~~HCHil~H~-~~GM~~~~~V~~p~~ 535 (591)
.+++||.|+||||+++|+ +.|||..++|..+..
T Consensus 288 ~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 288 KFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999999999999999997 999999999986543
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.5e-17 Score=173.11 Aligned_cols=248 Identities=13% Similarity=0.125 Sum_probs=160.9
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|++++||+.|.... ..+.+|+||+. ..||... ...|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5799999874 3899999999999999998642 47889999975 3688642 225899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeeccc-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVS 347 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~ 347 (591)
|+++++.+++++ +| .||++++.... .+. .....+.+.+.... ++| .. |.+..+. ..+ |...
T Consensus 106 g~~~~y~f~~~~-~G-t~~yH~H~~~~~~~~---~~Gl~G~~iv~~~~-----~~~---~~--d~e~~l~-l~d--~~~~ 167 (442)
T 2zoo_A 106 GHTSTFNFKALN-PG-LYIYHCATAPVGMHI---ANGMYGLILVEPKE-----GLA---PV--DREYYLV-QGD--FYTK 167 (442)
T ss_dssp TCEEEEEEECCS-CE-EEEEECCCSSHHHHH---HTTCEEEEEEECTT-----CCC---CC--SEEEEEE-EEE--ECBS
T ss_pred CCEEEEEEEcCC-Ce-EEEEecCCCChHHHH---hCccEEEEEEeCCC-----CCC---CC--CceEEEE-eee--eecc
Confidence 999999999974 78 99999853211 010 01123333333221 111 11 2121110 000 1111
Q ss_pred cCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCc
Q 007735 348 ASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427 (591)
Q Consensus 348 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~ 427 (591)
... + ... ...+.+... .......+.|||+.+...
T Consensus 168 ~~~------~-----~~~-~~~~~~~~~---~~~~~~~~liNG~~~~~~------------------------------- 201 (442)
T 2zoo_A 168 GEF------G-----EAG-LQPFDMAKA---IDEDADYVVFNGSVGSTT------------------------------- 201 (442)
T ss_dssp SCT------T-----CCE-EECBCHHHH---HTTCCSEEEETTSTTTTS-------------------------------
T ss_pred Ccc------c-----ccc-cccCChhHh---ccCCCCEEEECCCcCCCC-------------------------------
Confidence 000 0 000 000000000 001123577888764210
Q ss_pred ceEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 428 ETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 428 ~~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
..+.+.++.|+++.|.|.|.+ ...|+||+||+.|.|++.+++.. .|.+.|++.|.||+...+.|.+++
T Consensus 202 ~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 202 DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCS
T ss_pred CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCC
Confidence 001245677999999999975 46899999999999999875421 267899999999999999999999
Q ss_pred ccceeeecccccc-hhccceEEEEEecCCC
Q 007735 507 VGIWNLRTENLDS-WYLGQETYVRVVNPEA 535 (591)
Q Consensus 507 pG~W~~HCHil~H-~~~GM~~~~~V~~p~~ 535 (591)
||.|.+|||.+.| .+.||+..++|...+.
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999 5999999999986554
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-16 Score=161.28 Aligned_cols=259 Identities=14% Similarity=0.210 Sum_probs=153.1
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|+.|.... ..|.++++++.. +.||..+ + .|.|
T Consensus 54 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~p 110 (336)
T 1oe1_A 54 QAMTFNGSMP-------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNP 110 (336)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred EEEEECCccC-------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCC
Confidence 5799999864 3899999999999999998642 467788888753 2233332 1 3899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeeccc--ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFV--NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNV 346 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l 346 (591)
|+++++.+++++ +| .||.+++.... .+. ...+.+.-|++-.... ..+.+. |. .+|.+..+. ..+ |.+
T Consensus 111 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~-~~Gl~G~liV~~~~~~---~~~~~~-~~-~~D~e~~l~-~~D--~~~ 179 (336)
T 1oe1_A 111 GEQATLRFKADR-SG-TFVYHCAPEGMVPWHV-VSGMSGTLMVLPRDGL---KDPQGK-PL-HYDRAYTIG-EFD--LYI 179 (336)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEEEEEECTTCC---BCTTSC-BC-CCSEEEEEE-EEE--ECC
T ss_pred CCEEEEEEECCC-Ce-EEEEecCCCCchhHHH-hCCCeEEEEEecCcCC---cccccC-cc-cCCceeEee-eee--eee
Confidence 999999999985 78 99999986421 010 0113333334322111 011111 11 112211110 000 111
Q ss_pred ccCCCCCCCCCCC-CcCcc-ce-eEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 347 SASGARPNPQGSF-RYGSI-NV-TEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 347 ~~~~~~p~p~~~~-~~~~~-~~-~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
.. ...+.+ .+... .. ... +.... .. ....+.|||+.+...
T Consensus 180 ~~-----~~~g~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~liNG~~~~~~--------------------------- 222 (336)
T 1oe1_A 180 PK-----GPDGKYKDYATLAESYGDT--VQVMR--TL-TPSHIVFNGKVGALT--------------------------- 222 (336)
T ss_dssp CB-----CTTSSBCCCSSTGGGHHHH--HHHHH--TT-CCSEEEETTSTTTTS---------------------------
T ss_pred cc-----ccCCceeecccccccccch--hhHhh--cC-CCCEEEECCeeccCC---------------------------
Confidence 00 000000 00000 00 000 00000 00 113577887654210
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC--ccceEEeCCCcEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI--ARTTTQVYPGAWTAIL 501 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~--~rDTv~Vpp~g~~~ir 501 (591)
+...+.++.|+++.|+..+.....+++++|||.|.|+. .|.+ .+|. +.||+.|++|+.+.+.
T Consensus 223 ----~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvl 286 (336)
T 1oe1_A 223 ----GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAAL 286 (336)
T ss_dssp ----GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEE
T ss_pred ----CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEE
Confidence 01235567899999876666555667667999999986 3322 1232 4699999999999999
Q ss_pred EEeCCccceeeecccccch-hccceEEEEEecCCC
Q 007735 502 VSLDNVGIWNLRTENLDSW-YLGQETYVRVVNPEA 535 (591)
Q Consensus 502 f~adNpG~W~~HCHil~H~-~~GM~~~~~V~~p~~ 535 (591)
+.+++||.|+||||.+.|. +.||+..++|.....
T Consensus 287 v~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 287 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 9999999999999999886 999999999986543
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.62 E-value=9.7e-15 Score=156.99 Aligned_cols=237 Identities=11% Similarity=0.066 Sum_probs=152.3
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCC
Q 007735 27 FVYFDFEVSYITASPLG-----------VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSS 93 (591)
Q Consensus 27 ~~~~~~~v~~~~~~~dG-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 93 (591)
.+++.+.++.-....+| .....++|||+. .|+|+|++| ++++|+.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 34667777655444333 334689999995 799999999 99999999975 4678999 8976543 4
Q ss_pred CCCCCC----C--CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCce-----------eeEE-EecCCCCCCCCC
Q 007735 94 WQDGLL----G--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF-----------GGFI-INNRAIIPIPFD 155 (591)
Q Consensus 94 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~p~~ 155 (591)
..||.+ . ....|.||+++++.++++ +.|+||++++........+. .+++ +...... .+.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL-PLV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCC-C---
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC-cCc-
Confidence 689963 2 567899999999999995 68999999986433221111 1221 2111100 000
Q ss_pred CCCCcceEEecccccCch-HHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc
Q 007735 156 TPDGDITILIGDWYTRNH-TALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS 234 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 234 (591)
..+.+..|..+...+. ......+.-. ..++|||+.+. .+.+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~----------~~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWD----------VNRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCC----------TTCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCC----------CCCCcEEcCCCCEEEEEEECC---
Confidence 0000000111000000 0000000000 04679999862 123578999999999999997
Q ss_pred ceEEEEEeCCeeEEEeecCCce---eeeeeeEEEEccccEEEEEEEeCCCC---CcceEEEEeec
Q 007735 235 TSLNFRIQNHNLLLAETEGSYT---VQQNYTSLDIHVGQSYSFLVTMDQNA---STDYYIVASAR 293 (591)
Q Consensus 235 ~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~i~pGqR~dvlv~~~~~~---g~~y~i~~~~~ 293 (591)
..|.||||||.|+|++.||.+. +|...|++.| |+++.|.+++++++ | .|.++++..
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g-~w~~HCHil 426 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHF-PFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTB-CEEEEESSH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCC-ceEEeCCch
Confidence 4799999999999999999875 3678999999 99999999999642 2 488888864
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-16 Score=135.71 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=72.4
Q ss_pred CCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCC--CCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 53 GKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS--SWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 53 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
-+|++|+|++++||+|+ ++|..+.++++||||..++.. ..+||.+.+++.|.||++++|.|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 36789999999999985 579988999999999865421 0123332345789999999999998668999999999
Q ss_pred hhhhhcCceeeEEEec
Q 007735 131 HFQRASGGFGGFIINN 146 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~~ 146 (591)
.+..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 567789999999974
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.3e-14 Score=151.60 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=152.1
Q ss_pred CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC------CCCccCCCCcEEEEE
Q 007735 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG------TNCPIPPKWNWTYQF 115 (591)
Q Consensus 43 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~------tq~~I~PG~~~~Y~f 115 (591)
|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|..+.. .+.||.+. ....|.||++++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEE
Confidence 3445689999996 799999999 99999999975 46789999986543 46899652 346699999999999
Q ss_pred EeCCceeeeEEecChhhh--hh-cCc--------------eeeEEEe--cCCC-CCCCCCCCCCcceEEecccccCchHH
Q 007735 116 QVKDQVGSFFYFPSLHFQ--RA-SGG--------------FGGFIIN--NRAI-IPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~--~~~~-~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
++. ++|.||++|+.... .. .|| ....+++ .... .+.|... .-+.+...... .
T Consensus 251 ~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l------~~~~~l~~~~~-~ 322 (439)
T 2xu9_A 251 RLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKAL------SPFPTLPAPVV-T 322 (439)
T ss_dssp ECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCC------CCCCCCCCCSE-E
T ss_pred EcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccC------CCcccCCCCCc-c
Confidence 984 69999999984211 10 122 1122222 2111 0111100 00000000000 0
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCc
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 255 (591)
..-.+..+. ....+.|||+.+. .+.+.+.++.|++++|+|.|.+.. .|+||||||.|+|++.+|..
T Consensus 323 r~~~l~~~~---~g~~~~iNg~~~~----------~~~~~~~~~~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~ 388 (439)
T 2xu9_A 323 RRLVLTEDM---MAARFFINGQVFD----------HRRVDLKGQAQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRP 388 (439)
T ss_dssp EEEEEEEEG---GGTEEEETTBCCC----------TTCCCEEECTTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEE
T ss_pred eEEEEEeec---cCceEeECCEECC----------CCCCceecCCCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCC
Confidence 000000000 0137899999872 123458999999999999998754 79999999999999999976
Q ss_pred e-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 256 T-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 256 ~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
. +|...|++.|.||+++.+.++++ .+| .|.++++..
T Consensus 389 ~~~p~~rDTv~v~p~~~v~i~f~ad-npG-~w~~HCHil 425 (439)
T 2xu9_A 389 FPYRAWKDVVNLKAGEVARLLVPLR-EKG-RTVFHCHIV 425 (439)
T ss_dssp CSSCCCBSEEEECTTCEEEEEEECC-SCE-EEEEEESSH
T ss_pred CCCCCCeEEEEeCCCCEEEEEEEcC-CCC-CEEEECCcc
Confidence 5 47889999999999999999987 467 888888864
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-12 Score=143.22 Aligned_cols=240 Identities=13% Similarity=0.106 Sum_probs=154.1
Q ss_pred eEEEEECCCCC---------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCc
Q 007735 46 QQVIAINGKFP---------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (591)
Q Consensus 46 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 110 (591)
...++|||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999843 189999999999999999975 46789999976543 46899652 3466999999
Q ss_pred EEEEEEeCCceeeeEEecChhh---hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH-----------HH
Q 007735 111 WTYQFQVKDQVGSFFYFPSLHF---QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT-----------AL 176 (591)
Q Consensus 111 ~~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~-----------~~ 176 (591)
++..+++.+..|+||.+++... ....|+..+++.........|..... +. ..+.+....... ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 9999999655799999998531 12234434555443222111110000 00 000110000000 00
Q ss_pred HH--HhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeC
Q 007735 177 RK--TLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN 243 (591)
Q Consensus 177 ~~--~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 243 (591)
.. .+..+. ......+.|||+.+...... ........+.+.++.|++++++++| ...|+|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 000000 01112688999986321000 0000012367999999999999999 3479999999
Q ss_pred CeeEEEeecCCc----eeeeeeeEEEE-ccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 244 HNLLLAETEGSY----TVQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 244 h~~~via~DG~~----~~p~~~d~v~i-~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
|.|+|++.+|.. .+|...|++.| .+|+++.+.+++++ +| .|.++++...
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG-~W~~HCHi~~ 477 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PG-PWFLHCHIDW 477 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-Ce-eEEEeeChHH
Confidence 999999999865 35888999999 79999999999985 67 8888988753
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-12 Score=141.68 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=155.3
Q ss_pred eEEEEECCCCC--------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+.. .|+|+|++|+++++|+.|... ....+|++|..+.. -..||.+. ....|.||+++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceE
Confidence 35789999853 289999999999999999975 46789999976543 46899752 34568999999
Q ss_pred EEEEEeCCceeeeEEecChh--hh-----hhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH--HH------
Q 007735 112 TYQFQVKDQVGSFFYFPSLH--FQ-----RASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT--AL------ 176 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~--~~------ 176 (591)
+..+++.+..|+||.+++.. .+ ...|+..+++.........|......+. ..+.++...... ..
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~ 322 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTP 322 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSST
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccC
Confidence 99999965579999999853 11 2334434444433221111110000000 001111100000 00
Q ss_pred ---HHHhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceeEEEecCCEEEEEEeEeCCcceEEEEEe
Q 007735 177 ---RKTLDAGKGLGMPDGVLINGKGPYQYNTT-----LVP------DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQ 242 (591)
Q Consensus 177 ---~~~~~~~~~~~~~~~~lING~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 242 (591)
...+.-... .....+.|||+.+...... ..+ .......++++.|++++++++|......|+||||
T Consensus 323 ~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLH 401 (503)
T 1hfu_A 323 GAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLH 401 (503)
T ss_dssp TCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEET
T ss_pred CcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEe
Confidence 000000000 0012688999986321000 000 0012367899999999999996544558999999
Q ss_pred CCeeEEEeecCCc----eeeeeeeEEEE-ccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 243 NHNLLLAETEGSY----TVQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 243 gh~~~via~DG~~----~~p~~~d~v~i-~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
||.|+|++.+|.. .+|...|++.| .+|+++.+.+++++ +| .|.++++...
T Consensus 402 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG-~W~~HCHil~ 456 (503)
T 1hfu_A 402 GHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PG-PWFFHCHIEF 456 (503)
T ss_dssp TCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-Ce-eeeEecCchh
Confidence 9999999999865 25888999999 79999999999985 57 8888998753
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.8e-12 Score=138.17 Aligned_cols=240 Identities=14% Similarity=0.095 Sum_probs=157.9
Q ss_pred EEEEEEEEEEEecCCCe-------------eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCC
Q 007735 28 VYFDFEVSYITASPLGV-------------PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSS 93 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 93 (591)
.+| +.++......+|. ....+++||+. .|+|+|++|+ ++|+.|... ....+|++|..+.. .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 445 6665554444442 33679999996 6899999999 999999964 66789999987543 5
Q ss_pred CCCCC----CC--CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCce--------eeEEEecC-CCCCCC-----
Q 007735 94 WQDGL----LG--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF--------GGFIINNR-AIIPIP----- 153 (591)
Q Consensus 94 ~~DGv----~~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~-~~~~~p----- 153 (591)
+.||. |. ....|.|||+++..++++ +.|+|-..++.... .|+. -.+.++.. .....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 78973 22 456799999999999985 67887776653211 1111 11112211 111111
Q ss_pred ---CCCCCCcceEEecccccCchHHHHHHhhcCCCCC----CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEE
Q 007735 154 ---FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLG----MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRI 226 (591)
Q Consensus 154 ---~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~----~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rl 226 (591)
.+..+.+..+.++....+ +. .+....... ....++|||+.+. .+.+.++++.|++++|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~iNG~~~~----------~~~~~~~~~~G~~v~w 397 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MH-GMMGKSEGELKIALASMFLINRKSYD----------LKRIDLSSKLGVVEDW 397 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TT-TGGGCCHHHHHHHHHTTEEETTBCCC----------TTCCCEEEETTCCEEE
T ss_pred CCCCCCCCcEEEEEEeccchh----cc-cccccccccccccccceeEECCEeCC----------CCCceEEeCCCCEEEE
Confidence 111222333333221100 00 000000000 0125999999871 2357899999999999
Q ss_pred EEeEeCCcceEEEEEeCCeeEEEee--cCCcee---eeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 227 RVHNVGISTSLNFRIQNHNLLLAET--EGSYTV---QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 227 RliN~~~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+|.|.+.. .|.||||||+|+|++. +|.... +...|++.|.||+++.|.++++ .+| .|.++++..
T Consensus 398 ~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 398 IVINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 99997654 8999999999999999 897653 5678999999999999999997 567 888888764
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.4e-13 Score=122.24 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=74.7
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCC------CCCC--CCccCCCC--cE
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG------LLGT--NCPIPPKW--NW 111 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG------v~~t--q~~I~PG~--~~ 111 (591)
-|+..+-+.++|. ++|+|+|++||+|+++++|... ...|.+.+...+..+.+. ..++ ...|.||+ ++
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455555666777 6899999999999999999732 456777776544443321 1110 12789999 99
Q ss_pred EEEEEeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999996 79999999999889999999999984
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.6e-11 Score=129.43 Aligned_cols=244 Identities=12% Similarity=0.089 Sum_probs=152.9
Q ss_pred eEEEEECCCC---------CCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCc
Q 007735 46 QQVIAINGKF---------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (591)
Q Consensus 46 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 110 (591)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999972 3478999999999999999854 56789999976543 46899753 3456999999
Q ss_pred EEEEEEeCCceeeeEEecChh---hhhhcCceeeEEEecCCCCCCCCCCCCC-cceEEecccccCchHH-----------
Q 007735 111 WTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDG-DITILIGDWYTRNHTA----------- 175 (591)
Q Consensus 111 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~~d~-e~~l~l~d~~~~~~~~----------- 175 (591)
++..+++.+..|.||.++... .....|...+++.........|...... ... .+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCC
Confidence 999999954569999998742 1122233334554432221111100000 000 011111100000
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
....+.-... .....+.|||+.+..-... ..........+.++.|++++|.|.|......|+||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 0123688999886321100 000011235799999999999998433445899999999
Q ss_pred eeEEEeecCCce----eeeeeeEEEEcc-ccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 245 NLLLAETEGSYT----VQQNYTSLDIHV-GQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 245 ~~~via~DG~~~----~p~~~d~v~i~p-GqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|+|++.+|... .|...|++.|.+ |+.+.+.+++++ +| .|.++++...
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG-~W~~HCHi~~ 457 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PG-PWFLHCHIDW 457 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-Ce-eEEEEecchh
Confidence 999999988653 588899999997 999999999995 57 7888888653
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-11 Score=132.36 Aligned_cols=230 Identities=15% Similarity=0.107 Sum_probs=146.9
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCC----C--CCCccCCCCcEEEEEEe
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLL----G--TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 117 (591)
...+++||+. .|.+.+ +|+++++|+.|... ....+++ +|..+.. ...||.+ . ....|.|||+++..+++
T Consensus 183 gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v-Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~ 259 (488)
T 3od3_A 183 GDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVLVEV 259 (488)
T ss_dssp CSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEE
T ss_pred CCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE-EEeCCCcccCccEeceEEECCCCEEEEEEEe
Confidence 3579999995 588876 67899999999964 4567887 6765432 4689943 2 45679999999999999
Q ss_pred CCceeeeEEecChhhhhhcCc-----ee---eEEEec---CCCCCCCC-----C---C----CCCcceEEecc-cccCch
Q 007735 118 KDQVGSFFYFPSLHFQRASGG-----FG---GFIINN---RAIIPIPF-----D---T----PDGDITILIGD-WYTRNH 173 (591)
Q Consensus 118 ~~~~Gt~wYH~H~~~q~~~Gl-----~G---~liV~~---~~~~~~p~-----~---~----~d~e~~l~l~d-~~~~~~ 173 (591)
. +.++|+.-+..... .|+ .. .+.|.+ ++....|. + . ..+++.+.+.. +.....
T Consensus 260 ~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 260 N-DNKPFDLVTLPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp C-TTCCEEEEECCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred C-CCceEEEEEeccCC--CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 5 67788776542211 111 01 222332 11111111 0 0 11233343321 000000
Q ss_pred HHHHH-----Hhh------------cCCCC--------CCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEE
Q 007735 174 TALRK-----TLD------------AGKGL--------GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRV 228 (591)
Q Consensus 174 ~~~~~-----~~~------------~~~~~--------~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRl 228 (591)
..+.+ .+. .|... .....++|||+.+. .+.+.++++.|+++||+|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~----------~~~~~~~~~~G~~e~w~l 406 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFD----------MNKPMFAAAKGQYERWVI 406 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCC----------TTCCSEECCBSSCEEEEE
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCC----------CCCCceEcCCCCEEEEEE
Confidence 00000 000 01000 00124799999872 234779999999999999
Q ss_pred eEeCCcceEEEEEeCCeeEEEeecCCceee---eeeeEEEEccccEEEEEEEeCCCC---CcceEEEEeec
Q 007735 229 HNVGISTSLNFRIQNHNLLLAETEGSYTVQ---QNYTSLDIHVGQSYSFLVTMDQNA---STDYYIVASAR 293 (591)
Q Consensus 229 iN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~~d~v~i~pGqR~dvlv~~~~~~---g~~y~i~~~~~ 293 (591)
+|.+....|+||||||+|+|++.||....+ ...|+|.|. |+++.|++++++.+ | .|.++++..
T Consensus 407 ~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 407 SGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp ECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGG-CEEEEESSH
T ss_pred EeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCC-CEEEeCCch
Confidence 999865689999999999999999987643 478999999 99999999998643 4 788888764
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.34 E-value=4.8e-12 Score=109.20 Aligned_cols=104 Identities=22% Similarity=0.162 Sum_probs=78.3
Q ss_pred EEEEEEEEEE-----ecCCCeeeEE-EEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 29 YFDFEVSYIT-----ASPLGVPQQV-IAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 29 ~~~~~v~~~~-----~~~dG~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
.|.+.+.... ...+|..... ..+|++|++|.|++++||+|+++++|.... +||+.... .|+ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~ 70 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---Q 70 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---E
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---e
Confidence 4555554433 2345666555 489999999999999999999999999654 56654331 122 4
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
..+.||++++|.|++ +++|+||||||...... +|.|.|+|.+
T Consensus 71 ~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 71 EVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 679999999999997 68999999999765443 3999999974
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4.1e-11 Score=132.09 Aligned_cols=227 Identities=10% Similarity=0.053 Sum_probs=139.2
Q ss_pred cEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEEEEEeC-CceeeeEEecChh
Q 007735 59 TINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVK-DQVGSFFYFPSLH 131 (591)
Q Consensus 59 ~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~~ 131 (591)
+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||++++..+++. +..|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 45678999976543 46899652 346799999999999983 3489999999854
Q ss_pred hhhhcCce--eeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH---hhc-CC--CC----------------C
Q 007735 132 FQRASGGF--GGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT---LDA-GK--GL----------------G 187 (591)
Q Consensus 132 ~q~~~Gl~--G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~---~~~-~~--~~----------------~ 187 (591)
.-...... +.|..........|... .... ..|. +........ +.. .. .. .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Cccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 21011122 22223222110011000 0000 0000 000000000 000 00 00 0
Q ss_pred CCceEEEcCcCCCCCCCc---------------cCCC------------------CCcceeEEEecCCEEEEEEeEeCC-
Q 007735 188 MPDGVLINGKGPYQYNTT---------------LVPD------------------GIDYETIEVHPGKTYRIRVHNVGI- 233 (591)
Q Consensus 188 ~~~~~lING~~~~~~~~~---------------~~~~------------------~~~~~~~~v~~G~~~rlRliN~~~- 233 (591)
....+.|||+.+...... ..+. ......+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 012478888764211000 0000 001245899999999999999875
Q ss_pred ----cceEEEEEeCCeeEEEee-cCCc----------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 234 ----STSLNFRIQNHNLLLAET-EGSY----------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 234 ----~~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
...|.||||||.|+|++. +|.+ .+|...|++.|.+|+.+.+.+++++ +| .|.++++...
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG-~W~~HCHi~~ 511 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PG-VWAFHCHIEP 511 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CE-EEEEEESSHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-Ce-EEEEEeeehh
Confidence 336999999999999998 4653 2477899999999999999999985 67 8888888753
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-11 Score=131.32 Aligned_cols=242 Identities=11% Similarity=0.122 Sum_probs=149.7
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEEEEEeCC
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVKD 119 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~ 119 (591)
...++|||+. .|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999996 699999999999999999965 46778888876543 46899753 3466999999999999853
Q ss_pred c-eeeeEEecChhhhhh------cCcee-eEEEecCCC-CCCCCCCCCCcceEEecccccCc----------hHHHHHHh
Q 007735 120 Q-VGSFFYFPSLHFQRA------SGGFG-GFIINNRAI-IPIPFDTPDGDITILIGDWYTRN----------HTALRKTL 180 (591)
Q Consensus 120 ~-~Gt~wYH~H~~~q~~------~Gl~G-~liV~~~~~-~~~p~~~~d~e~~l~l~d~~~~~----------~~~~~~~~ 180 (591)
+ .|.||.......... ....+ +++...... .+.+.. ..++.-.+.|..... +..+.-.+
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~--~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY--VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC--CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc--ccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 3 578999987432110 01112 222222111 111100 000000000000000 00000000
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCc------------cCCC--CCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTT------------LVPD--GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNL 246 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~------------~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 246 (591)
...........++|||+.+..-... ..+. ......+.++.|++++|.|.|.+.. .|+||||||.|
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F 401 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAF 401 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCE
T ss_pred EeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCce
Confidence 0000001123678999975321000 0000 0113568999999999999998754 89999999999
Q ss_pred EEEeecCC-----------c---------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 247 LLAETEGS-----------Y---------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 247 ~via~DG~-----------~---------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|++.++. + .+|...|++.|.+|+.+.+.+++++ +| .|.++++...
T Consensus 402 ~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG-~W~~HCHi~~ 467 (534)
T 1zpu_A 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PG-VWFFHCHIEW 467 (534)
T ss_dssp EEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-Ce-eEEEEeCchh
Confidence 99998753 1 2367889999999999999999985 67 8889998653
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.3e-11 Score=128.96 Aligned_cols=244 Identities=10% Similarity=0.071 Sum_probs=151.3
Q ss_pred eEEEEECCCC--------CCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKF--------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 3479999999999999999864 56789999986643 46899763 34569999999
Q ss_pred EEEEEeCCceeeeEEecChh--h-hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH-----------HH
Q 007735 112 TYQFQVKDQVGSFFYFPSLH--F-QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA-----------LR 177 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~-----------~~ 177 (591)
+..+++.+..|.||..+... . ....|..-+++.........|......+. ..+.+........ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999987642 1 11122222344443221111110000000 0011111000000 00
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeC--CcceEEEEEeCC
Q 007735 178 KTLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVG--ISTSLNFRIQNH 244 (591)
Q Consensus 178 ~~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~--~~~~~~~~i~gh 244 (591)
..+.-... .....+.|||+.+..-... ........+.+.++.|++++|.|.|.+ ....|+||+|||
T Consensus 324 ~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00000000 0123688999886321000 000011235799999999999999432 234799999999
Q ss_pred eeEEEeecCCce----eeeeeeEEEEcc---ccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 245 NLLLAETEGSYT----VQQNYTSLDIHV---GQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 245 ~~~via~DG~~~----~p~~~d~v~i~p---GqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|+|++.+|... .|...|++.+.+ |+.+.+.+++++ +| .+.++++...
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG-~W~~HCHi~~ 457 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PG-PWFLHCHIDF 457 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-Cc-eEEEEeCChh
Confidence 999999887543 588899999986 999999999984 67 7888887643
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.9e-11 Score=128.68 Aligned_cols=214 Identities=11% Similarity=0.052 Sum_probs=142.1
Q ss_pred eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee--cC---ccCCCCCCCCCCCC------CCCccCCCCcEE
Q 007735 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW--SG---IQQRRSSWQDGLLG------TNCPIPPKWNWT 112 (591)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~--HG---~~~~~~~~~DGv~~------tq~~I~PG~~~~ 112 (591)
....++|||+. .|+|+|++| ++++|+.|... ....+|+ +| ..+.. -..||.+. ....|.||++++
T Consensus 168 ~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~d 244 (448)
T 3aw5_A 168 LGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAE 244 (448)
T ss_dssp CCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEE
T ss_pred cccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEE
Confidence 34679999996 699999999 99999999975 5678999 77 54332 46899642 345699999999
Q ss_pred EEEEeCCceeeeEEecChhhhhhc---Cc----------eee--EEEecCCCCCCCCC---------CCCCcceEEeccc
Q 007735 113 YQFQVKDQVGSFFYFPSLHFQRAS---GG----------FGG--FIINNRAIIPIPFD---------TPDGDITILIGDW 168 (591)
Q Consensus 113 Y~f~~~~~~Gt~wYH~H~~~q~~~---Gl----------~G~--liV~~~~~~~~p~~---------~~d~e~~l~l~d~ 168 (591)
..++++ .+.||..++....... ++ ... |.+......+.|.. ....+..+.+.
T Consensus 245 vlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~-- 320 (448)
T 3aw5_A 245 VVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS-- 320 (448)
T ss_dssp EEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE--
T ss_pred EEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe--
Confidence 999995 4789998774211000 01 111 22222111000100 00011111111
Q ss_pred ccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEE-EecCCEEEEEEeEeCCcceEEEEEeCCeeE
Q 007735 169 YTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIE-VHPGKTYRIRVHNVGISTSLNFRIQNHNLL 247 (591)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 247 (591)
.+ ...++|||+.+. .+.+.+. ++.|++++|+|.|.+....|+||||||.|+
T Consensus 321 -------------~~-----~~~~~iNg~~~~----------~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~ 372 (448)
T 3aw5_A 321 -------------LS-----GMQWTINGMFWN----------ASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMW 372 (448)
T ss_dssp -------------EE-----TTEEEETTBCCC----------TTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBE
T ss_pred -------------CC-----CceeeECCCcCC----------CCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEE
Confidence 00 125899999872 1235567 899999999999987444899999999999
Q ss_pred EEeecCCce------------ee---eeeeEEEEccccEEEEEEEeCCC-CCcceEEEEeec
Q 007735 248 LAETEGSYT------------VQ---QNYTSLDIHVGQSYSFLVTMDQN-ASTDYYIVASAR 293 (591)
Q Consensus 248 via~DG~~~------------~p---~~~d~v~i~pGqR~dvlv~~~~~-~g~~y~i~~~~~ 293 (591)
|++.+|.+. .| ...|++.|.||+++.+.+++... +...|.++++..
T Consensus 373 Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnpw~~HCHil 434 (448)
T 3aw5_A 373 IIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQLFPFHCHNL 434 (448)
T ss_dssp EEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCEEEEEESSH
T ss_pred EEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCcEEEEcCCh
Confidence 999999764 23 57899999999999999777511 111377777764
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-10 Score=126.72 Aligned_cols=246 Identities=7% Similarity=0.015 Sum_probs=149.0
Q ss_pred eEEEEECCCCC--------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999963 378999999999999999975 45789999976543 46899762 34669999999
Q ss_pred EEEEEeCCceeeeEEecCh--hhh---hhcCceeeEEEecCCCCCCCCCC----CC----CcceE-EecccccCch---H
Q 007735 112 TYQFQVKDQVGSFFYFPSL--HFQ---RASGGFGGFIINNRAIIPIPFDT----PD----GDITI-LIGDWYTRNH---T 174 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~--~~q---~~~Gl~G~liV~~~~~~~~p~~~----~d----~e~~l-~l~d~~~~~~---~ 174 (591)
+..+++.+..|.||..... ... .......+++.........|... .+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557899998775 211 01111122332221111111100 00 00000 0000000000 0
Q ss_pred --HHHHHhhcCCCCCCCceEEEcCcCCCCCCCcc------CCC---CCcceeEEEecCCEEEEEEeEeCC----cceEEE
Q 007735 175 --ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL------VPD---GIDYETIEVHPGKTYRIRVHNVGI----STSLNF 239 (591)
Q Consensus 175 --~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~------~~~---~~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 239 (591)
.+.-.+...........+.|||+.+....... .+. ......+.++.++++++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 00000000000112347899999863110000 000 011245888888888877777754 458999
Q ss_pred EEeCCeeEEEeecC---------C-c-----------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 240 RIQNHNLLLAETEG---------S-Y-----------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 240 ~i~gh~~~via~DG---------~-~-----------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
|||||.|+|++.++ . + ..|...|++.|.+|+++.+.+++++ +| .|.++++...
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG-~W~~HCHil~ 507 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PG-AWLFHCHIAW 507 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-Ce-eEEEEecchh
Confidence 99999999999986 2 2 1467899999999999999999885 67 8888998753
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-11 Score=134.45 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCce
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
++....++++|++||+|+|++++||+|+++++|..+..-. +||+.... .|+ ++.|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 5677899999999999999999999999999998653212 46665432 232 3679999999999998 699
Q ss_pred eeeEEecCh---hhhhhcCceeeEEEecCC
Q 007735 122 GSFFYFPSL---HFQRASGGFGGFIINNRA 148 (591)
Q Consensus 122 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 148 (591)
|+||||||. ..+ .||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 999999993 233 3999999999753
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.15 E-value=8.8e-11 Score=99.98 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|..+.|++++||+|++ .|..+.++++|+++- +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 5566678999999999655 698877888998852 366654 456799999999888 479999999987
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 53 999999984
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.15 E-value=2.7e-10 Score=124.40 Aligned_cols=218 Identities=13% Similarity=0.039 Sum_probs=139.8
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-CceeeecCc-cCCCCCCCCCCC----C--CCCccCCCCcEEEEEEe
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-SLLIHWSGI-QQRRSSWQDGLL----G--TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~-~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 117 (591)
...++|||+. .|.|+++.| ++++|+.|.... ...+|+.|. .+. ....||.+ . ....|.||++++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4679999996 799999885 999999999754 578999886 433 24689943 2 34669999999999998
Q ss_pred CCceeeeEE-ecChh--hhhhcCceeeEE-EecCC--C----CCCCCCCCC----------CcceEEecccccCchHHHH
Q 007735 118 KDQVGSFFY-FPSLH--FQRASGGFGGFI-INNRA--I----IPIPFDTPD----------GDITILIGDWYTRNHTALR 177 (591)
Q Consensus 118 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~li-V~~~~--~----~~~p~~~~d----------~e~~l~l~d~~~~~~~~~~ 177 (591)
.+.+|.++. ..-.. .....+....++ +.... . ...|..... .+..+.+..
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~---------- 376 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG---------- 376 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE----------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe----------
Confidence 544676332 21110 000001112222 22111 0 001110000 000111100
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCC---
Q 007735 178 KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGS--- 254 (591)
Q Consensus 178 ~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~--- 254 (591)
.........++|||+.+. +...+.++.|++++|+|.|.+.. .|.||||||.|+|++.+|.
T Consensus 377 -----~~~~~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 377 -----TQDEYGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp -----EECTTSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred -----ecCCCCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000001125789999862 23457899999999999998755 8999999999999998752
Q ss_pred ------------c------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 255 ------------Y------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 255 ------------~------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
. -++...|++.|.||+.+.+.+++++.+| .|.++++...
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 0 0234789999999999999999965678 8999998653
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=5.2e-10 Score=122.40 Aligned_cols=231 Identities=12% Similarity=-0.005 Sum_probs=140.3
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecC-------ccCCCCCCCCCC----CC--CCCccCCCCcE
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSG-------IQQRRSSWQDGL----LG--TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG-------~~~~~~~~~DGv----~~--tq~~I~PG~~~ 111 (591)
...++|||+. .|.|+|+.| ++++|+.|... ....++++| ..+. .-..||. |. ....|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 4579999994 799999985 99999999965 456788876 3222 2468985 22 45679999999
Q ss_pred EEEEEeCCcee-eeEEecChhhhhhc-------CceeeEEEecCCCCCCCCCCCCCcceEEecccc-cCchHHHHHHhhc
Q 007735 112 TYQFQVKDQVG-SFFYFPSLHFQRAS-------GGFGGFIINNRAIIPIPFDTPDGDITILIGDWY-TRNHTALRKTLDA 182 (591)
Q Consensus 112 ~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~-~~~~~~~~~~~~~ 182 (591)
+..+++.+.+| +||........... ...+.+-+........+. ....+..+.... ..........+.-
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999864467 68876532100000 011222222111100000 000000000000 0000000000000
Q ss_pred CCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEee-cCCc---e--
Q 007735 183 GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET-EGSY---T-- 256 (591)
Q Consensus 183 ~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~~---~-- 256 (591)
+ .....++|||+.+... .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|.. .
T Consensus 355 ~---~~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 355 G---RTGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp S---CCCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred e---ccCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 0 0123578999986210 11235689999999999999876558999999999999998 6631 1
Q ss_pred -eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 257 -~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+....|++.|.||+++.|.+++.+.+| .|.++++...
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCHil~ 461 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCHNLI 461 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecChHH
Confidence 114689999999999999998433678 8999998753
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=102.86 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=71.3
Q ss_pred EEeccCCcEEEEEEecCCCc-ceeeeecCceEEEE------EEcCC---CCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 431 VINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVV------GMDYG---EWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv------~~g~g---~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
.+.++.|++|+|+|.|.+.. .|.||+|+....+. ++..+ .+.+. -....++||..|.||+...+
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEE
Confidence 45678999999999999888 89999998642110 00000 01110 01235789999999999999
Q ss_pred EEEeCCccceeeecccccchhccceEEEEEe
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.+++||.|.||||+..|+. ||+..++|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.2e-10 Score=96.29 Aligned_cols=85 Identities=14% Similarity=0.022 Sum_probs=65.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..+.++.|++|+| .|.+...|++|+||..|... .|.. .+....++..+.||+...++|.+ ++||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----------cccccccccccCCCCeEEEEEecCCCCe
Confidence 4567889999876 48778899999999865220 0000 00122578899999999999998 7999
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.||||. |..+||...+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--chhcCCEEEEEEc
Confidence 99999994 9999999999885
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-10 Score=95.23 Aligned_cols=83 Identities=11% Similarity=0.178 Sum_probs=63.0
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
.+.|++++||+|++ .|....++++|+|+...+ ..+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999999765 588667788888875332 123320 123468999999999986568999999999
Q ss_pred hhhhcCceeeEEEec
Q 007735 132 FQRASGGFGGFIINN 146 (591)
Q Consensus 132 ~q~~~Gl~G~liV~~ 146 (591)
.+...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999963
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.5e-08 Score=109.54 Aligned_cols=240 Identities=7% Similarity=0.014 Sum_probs=145.9
Q ss_pred EEEEECCCCC----------------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCc
Q 007735 47 QVIAINGKFP----------------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCP 104 (591)
Q Consensus 47 ~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~ 104 (591)
..++|||+-. .++|++++|+++++|+.|... ....+|.+|..+.. ...||.+. ....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 4688999732 379999999999999999965 45689999986643 46899763 3456
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecChhh-----hhhcCceeeEEEecCCCCCCCCCCC--CCcceEEecc--cccCchH-
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHF-----QRASGGFGGFIINNRAIIPIPFDTP--DGDITILIGD--WYTRNHT- 174 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~p~~~~--d~e~~l~l~d--~~~~~~~- 174 (591)
|.|||+++..+++.+..|.||....... +.. +..-+|+..+......|.... ..+. .+.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 9999999999999656899999987532 111 112233333322111121100 0000 0000 0000000
Q ss_pred -HHH------HHhhcCCCCCCCceEEEcCcCCCCCCCc--c----CCCC---CcceeEEEe----cCCEEEEEEeEeCC-
Q 007735 175 -ALR------KTLDAGKGLGMPDGVLINGKGPYQYNTT--L----VPDG---IDYETIEVH----PGKTYRIRVHNVGI- 233 (591)
Q Consensus 175 -~~~------~~~~~~~~~~~~~~~lING~~~~~~~~~--~----~~~~---~~~~~~~v~----~G~~~rlRliN~~~- 233 (591)
.+. ..+..+ ......+.|||..+...... + .+.. .....+.+. .|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000 000000 01123577899875311000 0 0000 011234443 59999999999872
Q ss_pred cceEEEEEeCCeeEEEeecC-C-----------ceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 234 STSLNFRIQNHNLLLAETEG-S-----------YTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 234 ~~~~~~~i~gh~~~via~DG-~-----------~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
...|+||+|||+|+|++.+. . +..|...|++.+.+|+...+.+++++ +| .+.++++...
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG-~W~~HCHi~~ 530 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PG-SWLLHCHIAW 530 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CE-EEEEEECSHH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-Ce-eeEEEECcHH
Confidence 24899999999999998843 2 23478899999999999999999995 57 7888887653
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.89 E-value=8.6e-09 Score=92.26 Aligned_cols=90 Identities=10% Similarity=0.081 Sum_probs=66.7
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCC-CceeeecCccC-----------------CCCCCCCCCC-CCCCccCCCCcEEEE
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDE-SLLIHWSGIQQ-----------------RRSSWQDGLL-GTNCPIPPKWNWTYQ 114 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~~~-----------------~~~~~~DGv~-~tq~~I~PG~~~~Y~ 114 (591)
+|-.+.|++++||+|+++++|.-.. ++.++.|+... ...+..+... .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 5556799999999999999998666 78888876421 0000001100 112348999999999
Q ss_pred EEeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 115 FQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 115 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
|++ +++|+|+||||...+.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 58999999999888888 999999984
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.82 E-value=5.1e-08 Score=108.88 Aligned_cols=92 Identities=7% Similarity=-0.048 Sum_probs=74.2
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce-------------
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT------------- 256 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~------------- 256 (591)
..+.+||+.+ .+...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~-----------~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTF-----------NDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECST-----------TSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccC-----------CCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 4577888875 224678999999999999999866 799999999999998765321
Q ss_pred --------------eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 257 --------------VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 257 --------------~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
++...|++.|.+|+.+.|.+++.+.+| .|.++++...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999766788 8889998753
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.77 E-value=5.2e-08 Score=87.22 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=66.6
Q ss_pred CCCCCcEEeeCCCEEEEEEEE--CCCCCceeeecCc------------cCC----CCCCCCCCC--CCCCccCCCCcEEE
Q 007735 54 KFPGPTINVTTNNNVVVNVRN--KLDESLLIHWSGI------------QQR----RSSWQDGLL--GTNCPIPPKWNWTY 113 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N--~l~~~~siH~HG~------------~~~----~~~~~DGv~--~tq~~I~PG~~~~Y 113 (591)
+|-.+.|++++||+|+++++| .....+.++.+.. ... .-+..|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 454579999999999999999 6566777776631 000 000001111 11245899999999
Q ss_pred EEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 114 QFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 114 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.|++ +++|+|||||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 6899999999988788889999999974
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=86.67 Aligned_cols=85 Identities=13% Similarity=0.099 Sum_probs=62.5
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..+.++.|++|.|+ |.+...|+||+|+..+.. ..|.. . .....|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~~----~------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSADL----A------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHHH----H------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---ccccc----c------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 35678899999886 777789999998764310 00000 0 0011467788999999998887 8999
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.|||| .|..+||...+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 59999999999885
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.70 E-value=3.6e-08 Score=82.88 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=63.0
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
|..|-...|++++||+|++.++|.-...+++...+... ...+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECcc-
Confidence 55665568999999999999999866666665554321 1357899999999997 789999999974
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 5667999999985
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-08 Score=84.51 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=58.4
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
.+.|++++||+|+ ++|.-..++++|+|+...+ +|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--
Confidence 4789999999876 4788667899999985321 2211 11245899999998774 6999999999
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
.+...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 56667999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-08 Score=84.41 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=57.7
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|++ .|.-..++++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .+.
T Consensus 16 F~P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~ 87 (98)
T 1pcs_A 16 FEPSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHR 87 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccc
Confidence 3346899999999765 47755678888876422100 0000001124589999999877 47999999999 567
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 1pcs_A 88 GAGMVGKVVVE 98 (98)
T ss_dssp TTTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 78999999984
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-07 Score=84.37 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=56.3
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|-.+.|++++||+|++ .|....++++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4556567999999999865 488666666665432 123222 334689999999888 369999999986
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 32 999999984
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.60 E-value=8e-08 Score=79.01 Aligned_cols=76 Identities=17% Similarity=0.298 Sum_probs=56.1
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|++ .|.-+.+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .+.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCc
Confidence 4457899999999865 5775577888877621 000 1224689999988877 47999999999 455
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 56999999984
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.59 E-value=7.5e-08 Score=86.18 Aligned_cols=99 Identities=8% Similarity=0.001 Sum_probs=69.8
Q ss_pred EEeccCCcEEEEEEec--CCCcceeeeecCc--eEEEEEEcCCCCCCCCCCCCC---CCCCCccceEEeCCCcEEEEEEE
Q 007735 431 VINGTYRGFMEVILQN--NDTKMHAYHMSGY--AFFVVGMDYGEWTDNSRGTYN---KWDGIARTTTQVYPGAWTAILVS 503 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N--~~~~~HPfHlHG~--~F~Vv~~g~g~~~~~~~~~~n---~~~p~~rDTv~Vpp~g~~~irf~ 503 (591)
.+.++.|++|.|++.| .+...|.||++.. .|.-+.. .+.+...+ ..|- -....+++|..|.||....+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN-TAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHH-HHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhh-hhhhhccc-ccccCccccccccccceeeCCCceeEEEEE
Confidence 3567889999999999 6678999999842 1110000 00000000 0000 01134678999999999999999
Q ss_pred eCCccceeeecccccchhccceEEEEEe
Q 007735 504 LDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 504 adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
++.||.|.|||++..|...||...++|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999885
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1.8e-07 Score=81.48 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=53.6
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
...|+|++||+|++.++|. + |++.......-||.. ...+.||++++|.| +++|+|||+|. .+...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~~--~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGVE--SFKSKINESYTLTV---TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTCC--CCBCCTTCCEEEEE---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 3689999999988887772 3 444321111123321 24467999988888 46999999999 56778
Q ss_pred CceeeEEEec
Q 007735 137 GGFGGFIINN 146 (591)
Q Consensus 137 Gl~G~liV~~ 146 (591)
||.|.|+|.+
T Consensus 85 GM~G~I~V~~ 94 (123)
T 3erx_A 85 GMVGLVQVGD 94 (123)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEEECC
Confidence 9999999986
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=78.40 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=60.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|+| .|.+...|.+|+|+..+ ...++. ..+++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNA---------DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCcccc---------ccccccceecCCCCEEEEEe--CCCeE
Confidence 3567889999887 57777899999987521 000000 01246889999999887765 69999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |..+||...+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~i~V~ 98 (98)
T 2plt_A 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999994 9999999999873
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=77.75 Aligned_cols=80 Identities=13% Similarity=-0.002 Sum_probs=59.7
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+ |.+...|.+|+|+..+- +... .....|+..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~--------------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTA--------------AKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHH--------------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--cccc--------------ccccccccccCCCCEEEEEc--CCCeE
Confidence 35678899999887 77778999999874310 0000 00125788999999887766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |..+||...+.|.
T Consensus 79 y~~~C~~--H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999995 9999999999873
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2e-07 Score=78.39 Aligned_cols=79 Identities=8% Similarity=0.063 Sum_probs=55.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCC--------CCCCCCCCCccCCCCcEEEEEEeCCceeeeEEec
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSW--------QDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFP 128 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~ 128 (591)
.+.|++++||+|+ +.|.-..+++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 4587555667766621 0000 001111224589999999877 4799999999
Q ss_pred ChhhhhhcCceeeEEEe
Q 007735 129 SLHFQRASGGFGGFIIN 145 (591)
Q Consensus 129 H~~~q~~~Gl~G~liV~ 145 (591)
+ .+...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 66778999999984
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.8e-07 Score=81.85 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=53.7
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++.+.|. + |++.......-||. ....+.||++++|.| +.+|+|||||.. +...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeCC--CCcC
Confidence 4799999999987766653 3 44432111111222 124467999988888 469999999994 5668
Q ss_pred CceeeEEEecCC
Q 007735 137 GGFGGFIINNRA 148 (591)
Q Consensus 137 Gl~G~liV~~~~ 148 (591)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999753
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-07 Score=75.25 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=57.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|+.|.|+ |.+...|.+|+|+.. +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 34678889998876 666789999998721 1125778889998877765 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |...||...+.|.
T Consensus 72 y~~~C~~--H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CccCCCEEEEEEC
Confidence 9999994 9889999998873
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3.9e-07 Score=75.85 Aligned_cols=77 Identities=10% Similarity=0.235 Sum_probs=55.5
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC---CCCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL---GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
.+.|++++||+| ++.|.-..+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .+
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 468999999996 4558755567777765422 12211 1124589999999877 47999999999 56
Q ss_pred hhcCceeeEEEe
Q 007735 134 RASGGFGGFIIN 145 (591)
Q Consensus 134 ~~~Gl~G~liV~ 145 (591)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 667999999984
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.45 E-value=7.2e-07 Score=74.55 Aligned_cols=77 Identities=9% Similarity=0.202 Sum_probs=56.7
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-------CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
.+.|++++||+|+ ++|.-..++++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKIT--FKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 4689999999865 578866678888776422 22321 11235799999988774 6999999999
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 56677999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.44 E-value=7.4e-07 Score=74.50 Aligned_cols=77 Identities=12% Similarity=0.189 Sum_probs=55.8
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-------CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
.+.|++++||+|++ +|.-..+++++.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 46899999998755 78765677777665321 12221 11235799999988774 6999999999
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
.+..+||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56778999999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.43 E-value=4e-07 Score=79.15 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=53.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
...|+|++||+|++...+ .++++..+.. ..-+|. ....+.||++++|.| +.+|+|||||. .+...
T Consensus 21 P~~i~V~~GDTV~f~n~~---~~Hnv~~~~~-----~~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTD---KSHNAESVRE-----VWPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEEECSS---SSCCCEECTT-----TSCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECC---CCccEEEeCC-----cCCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcC
Confidence 469999999997655443 4544444321 111222 224567999988888 46899999996 56778
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.41 E-value=1.2e-06 Score=74.99 Aligned_cols=73 Identities=11% Similarity=0.166 Sum_probs=57.6
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|.+.|.+...|.|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46778899999999999877666655422 125678999999999999999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.||||+..|... |...+.|.
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEE
T ss_pred EEECCCCCchHH-CEEEEEEe
Confidence 999999555333 88888875
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=4.7e-07 Score=75.38 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=57.4
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+ |.+...|.+++++..+ ..+ . .....++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~-----~~~------~------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPA-----GES------A------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCT-----TSC------H------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCC-----ccc------c------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 4567889998876 7767789999986543 000 0 00114667788888877766 899999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|||+. |..+||...+.|.
T Consensus 79 ~y~C~~--H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp EEECSS--TTTTTCEEEEEEC
T ss_pred EEEccC--hhhcCCEEEEEEC
Confidence 999994 9999999998873
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.29 E-value=2.4e-06 Score=71.53 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=60.0
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 4678899999999999988888887755432 2356788889999999999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|+|.. |...||...+.|.
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999987 9889999988873
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-06 Score=72.84 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=59.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.| .|.+...|.+|+++..|- .+ .+. .. ....+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~--~~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TK--ISMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HH--HSCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----cc--ccccccceeeCCCCEEEEEe--CCCcE
Confidence 4567888999877 577778999999875430 00 000 00 01225667788998877766 69999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|||+. |..+||...+.|.
T Consensus 80 y~~~C~~--H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCAP--HAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCEEEEEEC
Confidence 9999994 9999999999873
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.6e-06 Score=74.08 Aligned_cols=76 Identities=12% Similarity=0.128 Sum_probs=50.4
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++...|. + |.+........||.. .....||++++|.| +.+|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK---G-----HNVESIKDMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEEEEESSS---S-----CCCEECTTCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---C-----eEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeCC--cccC
Confidence 4689999999976544432 3 443321111123321 13346999888777 469999999974 6667
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999873
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.5e-06 Score=72.54 Aligned_cols=79 Identities=10% Similarity=0.020 Sum_probs=54.6
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
|-.+.|++++||+|++ .|.-..++++....- .+-+|.- .....+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~-----~~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDED-----AVPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTT-----SSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCC-----CCccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 4357899999999665 577545666665531 1112321 0113589999998877 47999999998
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
. +...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 6 5556999999984
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-06 Score=73.76 Aligned_cols=76 Identities=8% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++ .|.-. + |.+.......-||.. ...+.||++++|.| +.+|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f--~n~~~-~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK-G-----HNVETIKGMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS-S-----CCCEECTTSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEEE--EECCC-C-----cEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeCC--cccc
Confidence 46899999999665 55422 3 443321111223321 23457999988877 369999999984 6667
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.19 E-value=7.6e-06 Score=71.68 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=61.4
Q ss_pred CCCCCcEEeeCC-CEEEEEEEECCCC-------CceeeecCccC-------CCC------CCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINVTTN-NNVVVNVRNKLDE-------SLLIHWSGIQQ-------RRS------SWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~~G-d~v~v~v~N~l~~-------~~siH~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.|++| |+|+|+|+|.-.. +..|--+|..+ ... +..|.-.. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 454458999999 9999999998532 23333333110 000 00111111 12358999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++ .++|+|||.|..-.++. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999998776776 8999999963
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.07 E-value=2.9e-06 Score=71.17 Aligned_cols=86 Identities=10% Similarity=-0.067 Sum_probs=57.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+ |.+...|.++++.-. + ++.. ...-.....+..+++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~--------~-~~~~-~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPA--------G-APGT-VASELKAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCT--------T-CCHH-HHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcc--------c-cccc-ccchhhcccccccceecCCCCEEEEEe--CCCeE
Confidence 45678899999876 777788999987311 1 1000 000000001224667788998877766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|||+. |..+||...+.|.
T Consensus 83 y~y~C~~--H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CcccCCeEEEEEC
Confidence 9999994 9999999999873
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.7e-05 Score=72.36 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=63.3
Q ss_pred EEEC-C-CCCCCcEEe-eCCCEEEEEEEECCCCC-------ceeeecCccC-------C-C----CCCCCCCCC-CCCcc
Q 007735 49 IAIN-G-KFPGPTINV-TTNNNVVVNVRNKLDES-------LLIHWSGIQQ-------R-R----SSWQDGLLG-TNCPI 105 (591)
Q Consensus 49 ~~~N-g-~~pgP~i~v-~~Gd~v~v~v~N~l~~~-------~siH~HG~~~-------~-~----~~~~DGv~~-tq~~I 105 (591)
+..+ + +|=-..|.| +.||+|+|+|+|.-..+ ..|--+|... . + -+..|.-.. ....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 4445 4 564458999 99999999999985432 2222222100 0 0 000111111 12358
Q ss_pred CCCCcEEEEEEeC-CceeeeEEecChhhhhhcCceeeEEEec
Q 007735 106 PPKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 106 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.||+++++.|+++ -++|+|||+|..-.++. ||.|-|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999974 16999999998766776 8999999963
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.00 E-value=3e-05 Score=65.50 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=52.7
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|-.+.|++++||+|++. |.-...+++..... ..|... ....+.||+++++.| +++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~~--N~d~~~H~v~~~~~-------~~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYWV--NGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEEE--ECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEEE--ECCCCcEEEEEeCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 34554579999999998654 77544444443321 112111 223588999998888 479999999987
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 96 H~----~M~G~I~V~ 106 (106)
T 1id2_A 96 HP----FMRGKVIVE 106 (106)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 42 999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=97.93 E-value=1.3e-05 Score=66.78 Aligned_cols=82 Identities=13% Similarity=0.017 Sum_probs=57.7
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.| .|.+...|.++++...+- .+ .+ ..+. ...++.+.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4577889999887 677778999999864320 00 00 0000 1124556788898877765 69999
Q ss_pred eeeecccccchhccceEEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V 530 (591)
|.|||+. |..+||...+.|
T Consensus 80 y~~~C~~--H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCSP--HQGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEcCC--CcccCCEEEEEE
Confidence 9999995 999999999887
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.90 E-value=7.2e-05 Score=65.43 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=58.9
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCC-------CceeeecCccC-------------CCCCCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDE-------SLLIHWSGIQQ-------------RRSSWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~siH~HG~~~-------------~~~~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.| ++||+|+|+|+|.-.. +..|--+|..+ .-.+..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 454458999 9999999999998543 22232222100 00001121111 12358999999
Q ss_pred EEEEEeCC-cee-eeEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVKD-QVG-SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~~-~~G-t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++. ++| +|||.|..-.++. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 99999840 355 5999998766776 8999999963
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.88 E-value=2.4e-05 Score=67.89 Aligned_cols=74 Identities=12% Similarity=0.102 Sum_probs=49.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++ .|.-. . |++.......-+|. ....+.||++++|.| +++|+|||+|..+..
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~-----H~v~~~~~~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-G-----HNVETIKGMIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-S-----CCCEECTTCSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEEE--EECCC-C-----cEEEEcccccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 46899999998665 45522 3 44432211112221 124467999988888 468999999987432
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999873
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-05 Score=83.04 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=64.1
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeE
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFF 125 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~w 125 (591)
..+...+-.|-.+.|+|++||+|++.++|.-...-.+ ||..... -|+ ..-+.||++.++.|++ +++|+||
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K~DaiPGrtnsvtFta-dkPGvY~ 615 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV---SMEISPQQTSSITFVA-DKPGLHW 615 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc---eeeeCCCCeEEEEEEc-CCCEEEE
Confidence 4555566677778999999999999999963211122 3322211 111 2458999999999998 7999999
Q ss_pred EecChh-hhhhcCceeeEEEec
Q 007735 126 YFPSLH-FQRASGGFGGFIINN 146 (591)
Q Consensus 126 YH~H~~-~q~~~Gl~G~liV~~ 146 (591)
|+|+.- ...-.+|.|.|+|++
T Consensus 616 y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 616 YYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp EECCSCCSTTCTTCEEEEEEEC
T ss_pred EECCCcCCCCcccceEEEEEec
Confidence 999942 222347999999986
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.84 E-value=7.6e-05 Score=65.16 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=58.5
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCC-----ce--eeecCcc-------CCCCCCC------CCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LL--IHWSGIQ-------QRRSSWQ------DGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~s--iH~HG~~-------~~~~~~~------DGv~~-tq~~I~PG~~~ 111 (591)
+|-...|.| ++||+|+|+++|.-..+ +. |--.|.. +.....+ |.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454458999 99999999999985432 32 2222211 0000011 11001 11248999999
Q ss_pred EEEEEeCC-ceee-eEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
++.|+++. ++|+ |||.|..-.++. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999840 4666 999998777776 899999984
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.84 E-value=3e-05 Score=65.41 Aligned_cols=71 Identities=13% Similarity=0.080 Sum_probs=49.9
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|+ |.+...|.+|+|... .|. ..+ ++-.+.||+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~~~--------~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------AAL--------KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------ccc--------cccccCCCCEEEEEe--CCCEEE
Confidence 4667889998885 777789999987521 110 001 112367887766555 899999
Q ss_pred eeecccccchhccceEEEEE
Q 007735 511 NLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V 530 (591)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 55 89888877
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.82 E-value=7e-05 Score=65.40 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=59.3
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCC-----ceeee--cC---------c----cCCCCCCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHW--SG---------I----QQRRSSWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~siH~--HG---------~----~~~~~~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|-...|.| +.||+|+|+++|.-..+ +.+-+ .+ + ...-.+..|.--. ..-.|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454558999 99999999999985432 22211 11 0 0000001121111 12358999999
Q ss_pred EEEEEeCC-ceee-eEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++. ++|+ |+|.|..-.++. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 5785 999998777776 8999999863
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.74 E-value=7.3e-05 Score=81.60 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=60.9
Q ss_pred EEEeccCCcEEEEEEecCCC---cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 430 SVINGTYRGFMEVILQNNDT---KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~---~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
+.+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||....+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45678899999999999653 3899998875321 46788999999999999
Q ss_pred ccceeeeccccc-chhccceEEEEEecCC
Q 007735 507 VGIWNLRTENLD-SWYLGQETYVRVVNPE 534 (591)
Q Consensus 507 pG~W~~HCHil~-H~~~GM~~~~~V~~p~ 534 (591)
||.|.||||..- ..|.||...+.|..++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999321 1345999999997653
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00031 Score=63.49 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=58.9
Q ss_pred EEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceE-------EeCCCc--EEEE
Q 007735 431 VINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTT-------QVYPGA--WTAI 500 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv-------~Vpp~g--~~~i 500 (591)
.+.++.|+.|.+++.|.+ ...|-|-++.. + ..+.. . |...+.+ .|.||+ ...+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~-~~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKK-------G-PPYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESC-------C-SCCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------C-cchhc-----c----ccccccccccccccccCCCCceEEEE
Confidence 577899999999999974 55666655522 1 01100 0 1111221 567888 8899
Q ss_pred EEEeCCccceeeecccccchhccceEEEEE
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V 530 (591)
.|.+ .||.+.||||+--|...||-..+.|
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999 9999999999988999999999887
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.001 Score=54.99 Aligned_cols=81 Identities=17% Similarity=0.098 Sum_probs=55.4
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|+.|.|+ |.+...|.+.++... +.. .++. ..+..+...+.||....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------VPA----GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------SCT----TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------Ccc----cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 45778899998886 666678877665411 100 0000 00123456788898777766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+.|+|-+ |..+||-..+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEchh--hccCCCEEEEEEC
Confidence 9999998 8888999988873
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00046 Score=59.75 Aligned_cols=75 Identities=12% Similarity=0.159 Sum_probs=51.2
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++++.|++|+|+..+ ..|.+..+.. .+.. . .+.+.+.||....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 4678899999998554 5676655421 1111 0 1122345677655555 899999
Q ss_pred eeecccccchhccceEEEEEecCC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.|||-. |..+||-..+.|.+|.
T Consensus 76 ~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEcCC--CCcCCCEEEEEECCCC
Confidence 999986 9999999999998764
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0005 Score=59.83 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=49.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|++.|. .|.+..+.. .+ ++.. ..+.+.||+...+.| +.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 346788899999987763 455544321 11 1100 111224676655444 89999
Q ss_pred eeeecccccchhccceEEEEEecC
Q 007735 510 WNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
|.|||-. |..+||-..+.|.++
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEeCC--CCcCCcEEEEEECcC
Confidence 9999996 999999999999865
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0026 Score=54.75 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCCCcEEeeC-CCEEEEEEEECCCC-------Cceeee---------cCccCC-CCC---CCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINVTT-NNNVVVNVRNKLDE-------SLLIHW---------SGIQQR-RSS---WQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~~-Gd~v~v~v~N~l~~-------~~siH~---------HG~~~~-~~~---~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.|+. |++|+++|+|.-.- +..|-- -|+..- ... ..|-... ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45567899976 99999999999633 222211 111100 001 1122111 12348999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+..|+++ .++|+|.|.|. .++ ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999985 27999999999 555 899999884
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0012 Score=55.47 Aligned_cols=71 Identities=13% Similarity=-0.039 Sum_probs=48.8
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|+ |.+...|.+++.... .+ . ..-++-.+.||....+.| +.||.+
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~----~----------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E----------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S----------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CC----c----------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4567889999887 777777877664321 00 0 001222456787776666 899999
Q ss_pred eeecccccchhccceEEEEE
Q 007735 511 NLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V 530 (591)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 65 99888877
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0012 Score=57.02 Aligned_cols=73 Identities=8% Similarity=0.122 Sum_probs=49.9
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++++.|++|.|++.|. .|.+..+. +.+. +.. +.+.+.||+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~P-~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIK----------EILP-EGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECT----------TSSC-TTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcC----------CcCC-CCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46788999999998873 35554432 1110 100 111235677666555 899999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
.|+|-. |..+||-..+.|.+
T Consensus 75 ~y~C~~--H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECGG--GTTTTCEEEEEESS
T ss_pred EEEeCC--CCcCCcEEEEEECC
Confidence 999996 99999999999986
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0017 Score=56.94 Aligned_cols=72 Identities=13% Similarity=-0.029 Sum_probs=50.0
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|+ |.+...|.+++.... .| . . .-++-.+.||+...+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g----~---------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E---------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S---------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CC----c---------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4677889999886 777778888764321 00 0 0 01223467888777666 899999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|||-+ |. ||...+.|.
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999998 65 999988873
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.013 Score=51.45 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=52.9
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh---hhhh
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQR 134 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~ 134 (591)
..|.+..|++|++.++|. +.. |+..... -|. +.-+.||+.-++.|++ +++|+|+|+|.. ..+
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 332 3433221 111 2346899988999997 789999999963 223
Q ss_pred hcCceeeEEEec
Q 007735 135 ASGGFGGFIINN 146 (591)
Q Consensus 135 ~~Gl~G~liV~~ 146 (591)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999998863
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.021 Score=61.32 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=60.3
Q ss_pred EEEeccCCcEEEEEEecCC---CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 430 SVINGTYRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~---~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
..+.++.|+.|+|++.|.+ +..|.|.+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4567899999999999974 5688887765432 125788899999999999
Q ss_pred ccceeeecccccch-hccceEEEEEe
Q 007735 507 VGIWNLRTENLDSW-YLGQETYVRVV 531 (591)
Q Consensus 507 pG~W~~HCHil~H~-~~GM~~~~~V~ 531 (591)
||.+.++|...-|. |.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999976554 67899988886
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.03 E-value=0.029 Score=50.91 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=57.5
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL- 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~- 130 (591)
+-+|-...|.+..|++|++.++|. +..++...-++ | -+.-+.||+.-++.|++ +++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------g---ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTS---------S---CEEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCC---------C---eEEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 334434689999999999999997 43333322221 1 12346799999999998 799999999983
Q ss_pred hhhhhcCceeeEEEec
Q 007735 131 HFQRASGGFGGFIINN 146 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~~ 146 (591)
-...-.+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 3344457999999873
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.012 Score=50.87 Aligned_cols=74 Identities=8% Similarity=0.060 Sum_probs=47.3
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+..+. .|.+.++- +.. ++.... +.+.||....+ .++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~-----------~~~~pG~t~~~--tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEK-----------FKSKINENYVL--TVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCC-----------CBCCTTCCEEE--ECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccc-----------eecCCCCEEEE--EeCCCEEE
Confidence 46678899998876653 45554431 111 010001 11246665444 45899999
Q ss_pred eeecccccchhccceEEEEEecC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.|+|-. |..+||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999986 898999999999753
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0095 Score=51.40 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=29.8
Q ss_pred CCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecC
Q 007735 493 YPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 493 pp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.||....+. ++.||.|.|+|-. |..+||-..+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 59 TVGQEAVVK--FDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CTTSCEEEE--CCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred CCCCEEEEE--eCCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 467765544 4899999999986 888999999999753
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.079 Score=46.33 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=51.4
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+.|+|++.|.+ ..|.| ++-+ + .--+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf-------~ip~-------------~-------~~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGF-------HVEG-------------T-------NINVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEE-------EETT-------------S-------SCEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceE-------EecC-------------C-------CceeEeCCCCcEEEEEEcCCCEEEE
Confidence 45778999999999874 55544 3311 0 1114567788788999999999999
Q ss_pred eeccccc-chhccceEEEEEe
Q 007735 512 LRTENLD-SWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHil~-H~~~GM~~~~~V~ 531 (591)
++|..+- .-|.+|-..++|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9996522 2456888888875
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.039 Score=50.07 Aligned_cols=91 Identities=13% Similarity=0.061 Sum_probs=59.4
Q ss_pred EEec-cCCcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCCC-------CCCCCCC-CC-CCccceEEeCCC
Q 007735 431 VING-TYRGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTDN-------SRGTYNK-WD-GIARTTTQVYPG 495 (591)
Q Consensus 431 v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~~-------~~~~~n~-~~-p~~rDTv~Vpp~ 495 (591)
.+++ +.|+.|.|+|.|.+.. .|-|-| ...+ .+... ....|-. .+ .....|..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4677 7899999999999765 365433 1111 00000 0000000 01 123456678999
Q ss_pred cEEEEEEEeC--CccceeeecccccchhccceEEEEEe
Q 007735 496 AWTAILVSLD--NVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 496 g~~~irf~ad--NpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+...|.|.++ .||.+-|+|-+--|+. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999877877 898888885
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.034 Score=47.79 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=44.7
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+.. +. .|-++++. +.+... .. .+.+.+|....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p~~-~~-----------~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIPDG-AE-----------AFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEES--SS-SCCCEECT----------TCSCTT-CC-----------CCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEEC--CC-CcEEEEcc----------cccCCC-cc-----------eeecCCCCEEEEEe--CCCEEE
Confidence 467788999988744 33 56666543 111110 00 11224676655555 899999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
.|+|-+ |.. |-..+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999988 555 888888875
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.11 Score=45.09 Aligned_cols=94 Identities=7% Similarity=-0.003 Sum_probs=60.4
Q ss_pred EEEeccCC-cEEEEEEecCCCc-----ceeeeecCceEEEEEEcCC--C----CCCCCCCCCCC-CC-CCccceEEeCCC
Q 007735 430 SVINGTYR-GFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYG--E----WTDNSRGTYNK-WD-GIARTTTQVYPG 495 (591)
Q Consensus 430 ~v~~~~~g-~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g--~----~~~~~~~~~n~-~~-p~~rDTv~Vpp~ 495 (591)
..++++.| +.|.+++.|.+.. .|-|-| ...+.- . ........|-. .+ -....+..|.||
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pG 90 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGG 90 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTT
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCcchhhhHHHhhhccccccccccccccceeeeeEECCC
Confidence 45678899 9999999998764 365543 221100 0 00000000100 01 122356678899
Q ss_pred cEEEEEEEeC---CccceeeecccccchhccceEEEEEe
Q 007735 496 AWTAILVSLD---NVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 496 g~~~irf~ad---NpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+...+.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 91 et~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 91 EKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 9999999987 9999999998877877 898888885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=93.98 E-value=0.31 Score=44.17 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=54.9
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+.|++.+.|. +-.|.|-+=.. .=-+.+-||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------------------------gik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGT---------------------------NINVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTS---------------------------SCEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCC---------------------------CeEEEecCCceeEEEEEeCCCEEEE
Confidence 4567899999999997 56776655221 1123456788888999999999999
Q ss_pred eeccc-ccchhccceEEEEEe
Q 007735 512 LRTEN-LDSWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHi-l~H~~~GM~~~~~V~ 531 (591)
+.|.. --+-|.+|...+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 456788999999886
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=92.45 E-value=0.39 Score=41.46 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=59.3
Q ss_pred EEEec-cCCcEEEEEEecCCCcc-----eeeeecCceEEEEEEcCCCCCC--------CCCCCCCC-CCC-CccceEEeC
Q 007735 430 SVING-TYRGFMEVILQNNDTKM-----HAYHMSGYAFFVVGMDYGEWTD--------NSRGTYNK-WDG-IARTTTQVY 493 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~~-----HPfHlHG~~F~Vv~~g~g~~~~--------~~~~~~n~-~~p-~~rDTv~Vp 493 (591)
..+.+ +.|+.|.+++.|.+..+ |-|-| ... +.... .....|-. .++ ....|..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi--------~~~-~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV--------SKK-SDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEE--------EET-THHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEE--------ccc-cchhhHHHhhhhccccccccccccchhhccceeeC
Confidence 34667 77999999999987653 75543 221 00000 00000100 111 223455689
Q ss_pred CCcEEEEEEEeC--Cccc-eeeecccccchhccceEEEEEe
Q 007735 494 PGAWTAILVSLD--NVGI-WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 494 p~g~~~irf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V~ 531 (591)
||+...+.|.+. .||. +-|.|-+-.|+. ||-..+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999877887 898888875
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=92.10 E-value=0.46 Score=41.02 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=58.9
Q ss_pred EEEec-cCCcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCC--------CCCCCCCC-CCC-CccceEEeC
Q 007735 430 SVING-TYRGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTD--------NSRGTYNK-WDG-IARTTTQVY 493 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~--------~~~~~~n~-~~p-~~rDTv~Vp 493 (591)
..+++ +.|+.|.+++.|.+.. .|-|-|- ..+ .... .....|-. .++ ....|..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLT-------KDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEE-------EGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEc-------Ccc--chhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 34677 7799999999999765 3655432 111 0000 00000100 111 123455689
Q ss_pred CCcEEEEEEEeC--Cccc-eeeecccccchhccceEEEEEe
Q 007735 494 PGAWTAILVSLD--NVGI-WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 494 p~g~~~irf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V~ 531 (591)
||+...+.|.++ .||. +-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 8876 999998877877 898888874
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=92.07 E-value=0.43 Score=41.13 Aligned_cols=98 Identities=14% Similarity=0.065 Sum_probs=58.8
Q ss_pred EEEec-cCCcEEEEEEecCCCc-----ceeeeecCce-EEEEEEcCCCCCCCCCCCCCC-CCC-CccceEEeCCCcEEEE
Q 007735 430 SVING-TYRGFMEVILQNNDTK-----MHAYHMSGYA-FFVVGMDYGEWTDNSRGTYNK-WDG-IARTTTQVYPGAWTAI 500 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~-F~Vv~~g~g~~~~~~~~~~n~-~~p-~~rDTv~Vpp~g~~~i 500 (591)
..+.+ +.|+.|.+++.|.+.. .|-|-+-... ++-+.. .+ ........|-. .++ ....|-.|.||+...+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~-~~-m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIAT-DG-LSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHH-HH-TTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHH-HH-hhccccccccccccchhheeeeeeCCCCEEEE
Confidence 44677 7899999999998765 3755442110 000000 00 00000000100 111 2234556899999999
Q ss_pred EEEeC--Cccc-eeeecccccchhccceEEEEE
Q 007735 501 LVSLD--NVGI-WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 501 rf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V 530 (591)
.|.+. .||. +-|.|-+--|+. ||-..+.|
T Consensus 96 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 96 TFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99998 7887 999999877887 88888877
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=91.81 E-value=0.97 Score=38.64 Aligned_cols=88 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred EEEeccC-CcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCC----C---C-CCCCC--CCCCCccceEEeC
Q 007735 430 SVINGTY-RGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTD----N---S-RGTYN--KWDGIARTTTQVY 493 (591)
Q Consensus 430 ~v~~~~~-g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~----~---~-~~~~n--~~~p~~rDTv~Vp 493 (591)
.-+.++. |+.|.++|.|.+.. .|-| ||+.... ... . . ...|- -+..+...|..|.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~--------Vl~~~~~-~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~ 88 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNW--------VLSTAAD-MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIG 88 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCC--------EEEEHHH-HHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceE--------EEcccch-HHHHHHHHHhcChhhccCCCCCccceeccceeC
Confidence 4567765 99999999999855 4643 4443210 000 0 0 00111 1123556777899
Q ss_pred CCcEEEEEEEeC---CccceeeecccccchhccceEEEEE
Q 007735 494 PGAWTAILVSLD---NVGIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 494 p~g~~~irf~ad---NpG~W~~HCHil~H~~~GM~~~~~V 530 (591)
||+...+.|.+. .||.+-|-|- .|+ ||-..+.|
T Consensus 89 pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 89 SGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999999987 8999999999 588 89888877
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 591 | ||||
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 2e-37 | |
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 4e-33 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 4e-32 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 1e-31 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 9e-30 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 2e-29 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 1e-27 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 8e-27 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 1e-26 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 3e-26 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 7e-23 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 4e-19 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 2e-18 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 5e-17 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 3e-14 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 2e-13 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 3e-13 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 4e-13 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 5e-13 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 5e-13 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 1e-12 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 2e-11 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 6e-11 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 1e-10 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 2e-10 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 1e-09 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 0.004 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 8e-09 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 3e-08 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 7e-06 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 2e-05 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 0.001 |
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 135 bits (341), Expect = 2e-37
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 153 PFDTPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPYQYNTTLVPD- 209
PF DG+I +L+ DW+ ++ L + + +G P +L+NG+G + + D
Sbjct: 1 PFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDS 59
Query: 210 -----------GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258
V P KTYRIR+ + +LNF I NH LL+ E +G+Y
Sbjct: 60 NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 119
Query: 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKA 318
+ +DI+ G+SYS L+T DQN S +Y++ R + + G+ +L+Y + +
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTP---PGLTLLNYLPN---S 173
Query: 319 RGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 353
LP P + +++++ + ++A+ P
Sbjct: 174 VSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP 208
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 123 bits (310), Expect = 4e-33
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 22/193 (11%)
Query: 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTK-----------PVTGPPRM 427
+I+G + ++ +S P TP A + + A+ + P + P R+
Sbjct: 17 VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRI 76
Query: 428 ETSVINGTYRGFMEVILQ------NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNK 481
V ++VILQ N ++ H +H+ G+ F+V+G G+++ + N
Sbjct: 77 GNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNL 136
Query: 482 WDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEF 541
+ R T ++P WTAI DN G+W ++G +
Sbjct: 137 KNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEK-----VG 191
Query: 542 PIPDNALFCGALS 554
IP AL CG +
Sbjct: 192 RIPTKALACGGTA 204
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 118 bits (296), Expect = 4e-32
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 30 FDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL-----IHW 84
V+ SP G + I +NG FP P I + +NV + L + IHW
Sbjct: 6 ASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHW 65
Query: 85 SGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFI 143
G Q ++W DG N CPI ++ Y F V DQ G+F+Y L Q G G F+
Sbjct: 66 HGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 144 I 144
+
Sbjct: 126 V 126
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 118 bits (297), Expect = 1e-31
Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 8/161 (4%)
Query: 154 FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDY 213
+D D I I DWY T L + K PD LING G N P
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSAN----PSAGQL 54
Query: 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYS 273
+ V GK YR R+ + + F I H + + E +G SL I GQ YS
Sbjct: 55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYS 114
Query: 274 FLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314
+V +Q +Y+I A+ + + AI Y +
Sbjct: 115 VVVEANQAVG-NYWIRANPSNGR-NGFTGGINSAIFRYQGA 153
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 111 bits (279), Expect = 9e-30
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 31 DFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL-----IHWS 85
++ SP G + I +NG GP I N+N +NV N LD + IHW
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 86 GIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII 144
G+ QR ++W DG G CPI P + Y+F G+F+Y Q G G +I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 110 bits (277), Expect = 2e-29
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 28 VYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNK-----LDESLL 81
V D + P G + + G P I ++ +NV ++ + +
Sbjct: 3 VALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATS 62
Query: 82 IHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFG 140
IHW G Q ++ DG N CPI P ++ Y F V Q G+++Y L Q G G
Sbjct: 63 IHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRG 122
Query: 141 GFIINNRA 148
F++ +
Sbjct: 123 AFVVYDPN 130
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 107 bits (268), Expect = 1e-27
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 16/164 (9%)
Query: 154 FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDY 213
+D D + I + DWY +++ G PD LINGKG Y +
Sbjct: 6 YDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGGPA-----AEL 53
Query: 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYS 273
+ V GK YR+R+ ++ + F I H L + E +G T L I GQ YS
Sbjct: 54 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYS 113
Query: 274 FLVTMDQNASTDYYIVASARF---VNESQWKRVTGVAILHYTNS 314
F++ +Q +Y+I A + AIL Y +
Sbjct: 114 FVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGA 156
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 105 bits (262), Expect = 8e-27
Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 9/159 (5%)
Query: 158 DGDIT-ILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETI 216
D D+ I D+Y R L D VLING Y +
Sbjct: 2 DIDLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVNPNTGE-----GQYANV 55
Query: 217 EVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLV 276
+ PGK +R+R+ N + NH + + + SL + VGQ Y ++
Sbjct: 56 TLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI 115
Query: 277 TMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNS 314
+ +Y+ + AI HY +
Sbjct: 116 DASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 153
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 102 bits (255), Expect = 1e-26
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNK-LDESLLIHWSGI 87
++ +EV Y+ +P V+ ING+FPGPTI ++VVV + NK E ++IHW GI
Sbjct: 5 HYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGI 64
Query: 88 QQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145
QR + W DG + C I P + Y F V D G+FFY L QR++G +G I++
Sbjct: 65 LQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 103 bits (257), Expect = 3e-26
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 13/161 (8%)
Query: 154 FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDY 213
+D + I + DWY HTA R + D LING G T
Sbjct: 7 YDVDNESTVITLTDWY---HTAAR---LGPRFPLGADATLINGLGRSASTPT-----AAL 55
Query: 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYS 273
I V GK YR R+ ++ + F I HNL + E +G + S+ I Q YS
Sbjct: 56 AVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYS 115
Query: 274 FLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314
F++ +Q +Y+I A+ F + AIL Y +
Sbjct: 116 FVLNANQTVG-NYWIRANPNFGT-VGFAGGINSAILRYQGA 154
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 93.3 bits (231), Expect = 7e-23
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 28 VYFDFEVSYIT--ASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-SLLIH 83
+ F ++ + P GV ++V+ ING GP I + V V V N L IH
Sbjct: 34 QSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIH 93
Query: 84 WSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGF 142
W GI Q+ ++ DG G CPIPPK Q G+ +Y Q +G G
Sbjct: 94 WHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTI 153
Query: 143 IINNRAIIP 151
IN A +P
Sbjct: 154 QINGPASLP 162
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 82.1 bits (202), Expect = 4e-19
Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 8/126 (6%)
Query: 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLI 82
D + ++ G NG GP + + V V++ N+L E +
Sbjct: 11 TTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTL 70
Query: 83 HWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGG 138
HW G++ DG G IPP + V + ++ P H Q A G
Sbjct: 71 HWHGLEV--PGEVDG--GPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGL 126
Query: 139 FGGFII 144
G +I
Sbjct: 127 AGLVVI 132
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 80.5 bits (198), Expect = 2e-18
Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 9/121 (7%)
Query: 37 ITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQD 96
+ G Q + NG PGPT+ V + V + + N ++ ++
Sbjct: 44 MVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN---AMPHNVEFHGATGAL 100
Query: 97 GLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIPI 152
G + P T +F+ D+ G+F Y + + SG G ++ R +
Sbjct: 101 G-GAKLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKD 158
Query: 153 P 153
P
Sbjct: 159 P 159
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 76.3 bits (187), Expect = 5e-17
Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 9/128 (7%)
Query: 28 VYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSG 86
V E T GV + +G PG I V + V V N
Sbjct: 27 VRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSS---TVPHN 83
Query: 87 IQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFI 143
+ ++ Q G P T+ F+ Q G + Y + A+G +G +
Sbjct: 84 VDFHAATGQGG-GAAATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLIL 141
Query: 144 INNRAIIP 151
+ + +P
Sbjct: 142 VEPKEGLP 149
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 68.6 bits (167), Expect = 3e-14
Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 7/114 (6%)
Query: 37 ITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQD 96
+ G + NG PGP + V N+ V + + N I ++
Sbjct: 43 LVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTN---TLLHNIDFHAATGAL 99
Query: 97 GLLGTNCPIPPKWNWTYQFQVKDQVGSFFY---FPSLHFQRASGGFGGFIINNR 147
G G + P T +F+ ++ + + SG G ++ R
Sbjct: 100 G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.6 bits (162), Expect = 2e-13
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS-------SWQDGLLGTNCPIPP 107
GPT+ + + V+ +NK + L IH GI+ + + + + P
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 108 KWNWTYQFQVKDQV---------GSFFYFPSLHFQR--ASGGFGGFIINNR 147
+TY++ + + + Y+ ++ SG G +I +
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 65.8 bits (160), Expect = 3e-13
Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 20/169 (11%)
Query: 160 DITILIGDWYTRNHTALR--KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIE 217
D+ +++ D + + D +L NG Q+
Sbjct: 10 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHA-------------- 55
Query: 218 VHPGKTYRIRVHNVGISTSLNFR-IQNHNLLLAETEGSYTVQ-QNYTSLDIHVGQSYSFL 275
P R+R+ N + SLNF N L + ++G + + L + +G+ + L
Sbjct: 56 -APRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVL 114
Query: 276 VTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPE 324
V ++ N D + ++ ++ A G LP+
Sbjct: 115 VEVNDNKPFDLVTLPVSQMGMAIAPFDKPH-PVMRIQPIAISASGALPD 162
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 65.6 bits (159), Expect = 4e-13
Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 32/153 (20%)
Query: 28 VYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL--------- 76
Y++ + T P ++ NG FPGPTI V N NV V N L
Sbjct: 25 TYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPID 84
Query: 77 -------------DESLLIHWSGIQQRRSSWQDGLLG----TNCPIPPKWNWTYQFQVKD 119
+ ++H G S P Y + +
Sbjct: 85 HTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQ 144
Query: 120 QVGSFFYFPSLH----FQRASGGFGGFIINNRA 148
+ +Y +G G +II++
Sbjct: 145 RGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 177
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.9 bits (160), Expect = 5e-13
Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 18/111 (16%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQD-------GLLGTNCPIPP 107
F GP I T + V V+++N H GI + + + P
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 132
Query: 108 KWNWTYQFQVKDQV---------GSFFYFPSLHFQR--ASGGFGGFIINNR 147
+TY ++ + Y + + ASG G II +
Sbjct: 133 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKK 183
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.5 bits (159), Expect = 5e-13
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 19/101 (18%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQ 114
GP ++ + V + +N IH G+Q S+ P P TY
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTV--------TPTLPGETLTYV 134
Query: 115 FQVKDQVGS---------FFYFPSLHFQR--ASGGFGGFII 144
+++ ++ G+ + Y+ ++ + SG G I+
Sbjct: 135 WKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIV 175
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 64.9 bits (157), Expect = 1e-12
Identities = 26/177 (14%), Positives = 47/177 (26%), Gaps = 20/177 (11%)
Query: 381 DGKRRATLSGISF-VNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGF 439
++G V+ PI Y L T ++ ++
Sbjct: 25 TPLFVWKVNGSDINVDWGKPIID---------YILTGNTSYPVSDNIVQVDAVDQWTYWL 75
Query: 440 MEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRG----------TYNKWDGIARTT 489
+E + + H H+ G+ F V+G + + N + R T
Sbjct: 76 IENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDT 135
Query: 490 TQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDN 546
T + G W + DN G W G + + D+
Sbjct: 136 TMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDD 192
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.3 bits (148), Expect = 2e-11
Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 22/115 (19%)
Query: 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSS-----------WQDGLLGTNC 103
GP I + + V NK L I G++ +++ + +
Sbjct: 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSAS 142
Query: 104 PIPPKWNWTYQFQVKDQVGS---------FFYFPSLHFQR--ASGGFGGFIINNR 147
+ P +TY++ V +VG Y+ ++ + +G G I +
Sbjct: 143 HVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKK 197
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 58.6 bits (141), Expect = 6e-11
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 10/110 (9%)
Query: 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102
Q + +G PGP + V + V + + N + I ++ G G
Sbjct: 47 DAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPEN---TMPHNIDFHAATGALG-GGGL 102
Query: 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLH-----FQRASGGFGGFIINNR 147
I P +F+ + G+F Y + + SG G ++ R
Sbjct: 103 TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 59.1 bits (142), Expect = 1e-10
Identities = 29/169 (17%), Positives = 47/169 (27%), Gaps = 19/169 (11%)
Query: 385 RATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVIL 444
R T++G ++ +PS P L + + + + V+
Sbjct: 36 RFTINGTAYESPSVPTLLQ----------IMSGAQSANDLLPAGSVYELPRNQVVELVVP 85
Query: 445 QNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV-YPGAWTAILVS 503
H +H+ G+AF VV TYN + + R + G I
Sbjct: 86 AGVLGGPHPFHLHGHAFSVVRSAGS-------STYNFVNPVKRDVVSLGVTGDEVTIRFV 138
Query: 504 LDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGA 552
DN G W G + P + A C
Sbjct: 139 TDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPP-VEWAQLCEI 186
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 57.4 bits (138), Expect = 2e-10
Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 8/141 (5%)
Query: 157 PDGDITILIGDW-YTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYET 215
+ D+ +LI D + + + +P+ ++ T++ +G +
Sbjct: 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA----FCGETILVNGKVWPY 60
Query: 216 IEVHPGKTYRIRVHNVGISTSLNFRIQN-HNLLLAETEGSYTVQ-QNYTSLDIHVGQSYS 273
+EV + YR RV N + + N + N + + ++G + S + + Y
Sbjct: 61 LEV-EPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYD 119
Query: 274 FLVTMDQNASTDYYIVASARF 294
++ + SA
Sbjct: 120 IIIDFTAYEGESIILANSAGC 140
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 54.8 bits (131), Expect = 1e-09
Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 7/100 (7%)
Query: 51 INGKFPGPTINVTTNNNVVVNVRNKLD---ESLLIHWSGIQQRRSSWQD---GLLGTNCP 104
++ PT+ + V V N S I G D G +
Sbjct: 54 VHD-KKNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPV 112
Query: 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII 144
F G+++Y + A+G FG ++
Sbjct: 113 PKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 36.0 bits (82), Expect = 0.004
Identities = 16/86 (18%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Query: 204 TTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEG-SYTVQQNYT 262
+ T+E+ G T + N +F I A V
Sbjct: 50 PSFEVHDKKNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGF 109
Query: 263 SLDIHVGQSYSFLVTMDQNASTDYYI 288
S G+ T A T YY+
Sbjct: 110 SPVPKDGKFGYTNFTWHPTAGTYYYV 135
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 53.3 bits (127), Expect = 8e-09
Identities = 28/176 (15%), Positives = 43/176 (24%), Gaps = 22/176 (12%)
Query: 378 EMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437
T++G F+ P+ P+ L V L ++ P
Sbjct: 31 GRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPAN----------- 79
Query: 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP-GA 496
+ + H +H+ G+ F VV YN + + R + G
Sbjct: 80 --QVIEISIPGGGNHPFHLHGHNFDVVRTPGSSV-------YNYVNPVRRDVVSIGGGGD 130
Query: 497 WTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGA 552
DN G W L G P P C
Sbjct: 131 NVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAIS-PAWDDLCPK 185
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 52.2 bits (124), Expect = 3e-08
Identities = 34/171 (19%), Positives = 44/171 (25%), Gaps = 19/171 (11%)
Query: 385 RATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVIL 444
++ SF P+ P+ L + A L V P T I
Sbjct: 36 NFFINNASFTPPTVPVLLQILSGAQTAQDLLPAG-SVYPLPAHSTIEITLPATALA---- 90
Query: 445 QNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVY---PGAWTAIL 501
H +H+ G+AF VV TYN D I R G I
Sbjct: 91 ---PGAPHPFHLHGHAFAVVRSAGS-------TTYNYNDPIFRDVVSTGTPAAGDNVTIR 140
Query: 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGA 552
DN G W L G V + + C
Sbjct: 141 FQTDNPGPWFLHCHIDFHLEAGFAI-VFAEDVADVKAANPVPKAWSDLCPI 190
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 7e-06
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 16/130 (12%)
Query: 29 YFDFEVSYITASPLGVPQQ---------VIAINGKFPG--PTINVTTNNNVVVNVRNKLD 77
+ + T +P V ++ + ++NG G P + + ++VV + + +
Sbjct: 19 LLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGN 78
Query: 78 ESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136
E+ GI +++ + P+ + T D G+F
Sbjct: 79 EA---DVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMW-PDTEGTFNVECLTTDHYTG 134
Query: 137 GGFGGFIINN 146
G + +N
Sbjct: 135 GMKQKYTVNQ 144
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 2e-05
Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 13/128 (10%)
Query: 29 YFDFEVSYITASPLGVPQ---------QVIAINGKFPG--PTINVTTNNNVVVNVRNKLD 77
Y D + + P V + ++ AING+ G + + + V + +
Sbjct: 20 YLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGN 79
Query: 78 ESLLIHWSGIQQRRSSWQDGLLGTN-CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136
E L G+ ++ I P T + G + + +
Sbjct: 80 EIDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFP-RTPGIWLLHCHVTDHIHA 138
Query: 137 GGFGGFII 144
G + +
Sbjct: 139 GMETTYTV 146
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.5 bits (86), Expect = 0.001
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 47 QVIAINGK-FPGPTINVTTNNNVVVNVRN--KLDESLLIHWSGIQQRRSSWQDGLLGTNC 103
+ AING + P + + V +++ N + ++H+ G + Q LG
Sbjct: 40 EFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQLGV-W 98
Query: 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFII 144
P+ P T + + + G + + + +G F+I
Sbjct: 99 PLLPGSFKTLEMK-ASKPGWWLLDTEVGEIQRAGMQTPFLI 138
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 591 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.97 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.97 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.92 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.91 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.87 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.85 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.83 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.82 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.82 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.8 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.79 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.66 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.66 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.66 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.66 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.65 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.6 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.58 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.55 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.51 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.49 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.39 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.37 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.18 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.15 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.12 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.02 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.0 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.97 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 98.93 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.92 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.91 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.9 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.9 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.82 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.77 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.76 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.74 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.72 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.63 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.62 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.49 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.48 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.47 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.46 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.44 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.43 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.4 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.38 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.33 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.32 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.2 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.19 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.19 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.19 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.12 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 98.1 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.04 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.03 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.01 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.99 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 97.99 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 97.97 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.83 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.83 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.83 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.77 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.74 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.7 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.69 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.67 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.65 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.52 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.5 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.41 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.35 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.33 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.33 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.28 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.08 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.83 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 96.77 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 96.71 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 96.71 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.66 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 96.65 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 95.83 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 95.75 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 95.62 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 95.54 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 95.42 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 95.42 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.37 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 95.13 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 94.97 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 94.9 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 94.49 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 94.48 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 94.46 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 94.45 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 94.22 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 93.93 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 93.7 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 93.5 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 91.19 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 90.46 | |
| d3dtub1 | 152 | Cytochrome c oxidase {Rhodobacter sphaeroides [Tax | 81.87 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=9.1e-41 Score=319.16 Aligned_cols=185 Identities=25% Similarity=0.404 Sum_probs=155.1
Q ss_pred ceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCC-----------CCCCCCCCCcceEEEe
Q 007735 365 NVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP-----------TKPVTGPPRMETSVIN 433 (591)
Q Consensus 365 ~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~-----------~~p~~~~~~~~~~v~~ 433 (591)
+++|++.|.++.. ..+|..+|+|||+||..|++|+|++.+++..+.|+.+.+ ..+.+...+.+++++.
T Consensus 4 ~~~~ti~l~~~~~-~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~ 82 (214)
T d1aoza3 4 KFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQ 82 (214)
T ss_dssp SCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEE
T ss_pred CCCeEEEEecCcc-ccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEE
Confidence 3568888765432 678999999999999999999998887766665544321 1122345677899999
Q ss_pred ccCCcEEEEEEecCC------CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCc
Q 007735 434 GTYRGFMEVILQNND------TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 434 ~~~g~~ve~vl~N~~------~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNp 507 (591)
+++|++|||+|+|.+ ...||||||||+||||+++.|.|+......+|+.+|++|||+.|++++|++|||++|||
T Consensus 83 ~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnp 162 (214)
T d1aoza3 83 FKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNP 162 (214)
T ss_dssp ECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSC
T ss_pred ecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCC
Confidence 999999999999965 34799999999999999999999887777899999999999999999999999999999
Q ss_pred cceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCcccccCcCC
Q 007735 508 GIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSH 555 (591)
Q Consensus 508 G~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~ 555 (591)
|.|+||||+++|++.|||+++.|... +..++|++++.||.+..
T Consensus 163 G~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~cg~~~~ 205 (214)
T d1aoza3 163 GVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTAK 205 (214)
T ss_dssp EEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHHH
T ss_pred eeEEEEECcHHHHhCcCcEEEEEccc-----cccCCCccccccccchh
Confidence 99999999999999999999987533 24678999999997653
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=3e-40 Score=292.36 Aligned_cols=124 Identities=26% Similarity=0.464 Sum_probs=117.6
Q ss_pred ceEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCCCC
Q 007735 26 LFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~ 99 (591)
++++|+|++++..++|||. ++++++|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++..++++||++
T Consensus 1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~ 80 (136)
T d1v10a1 1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 80 (136)
T ss_dssp CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence 4689999999999999995 689999999999999999999999999999976 7899999999999999999999
Q ss_pred C-CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCC
Q 007735 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 100 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 149 (591)
+ +||+|.||++|+|+|++++++||||||||.+.|+.+||+|+|||+++++
T Consensus 81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 8 9999999999999999988899999999999999999999999998754
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3.6e-38 Score=278.40 Aligned_cols=123 Identities=39% Similarity=0.757 Sum_probs=118.2
Q ss_pred ceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+|+|+|+|++...+|||.++++|+|||++|||+|+|++||+|+|+|+|+|+ +++++||||+++...+++||+++ +||
T Consensus 2 ~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~~ 81 (129)
T d1aoza1 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (129)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred cEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCccccccccccc
Confidence 4799999999999999999999999999999999999999999999999986 79999999999999999999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCC
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 149 (591)
+|.||++++|+|++ +++||||||||+..|+.+||+|+|||+++++
T Consensus 82 ~I~PG~s~~y~f~a-~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTT
T ss_pred eECCCCEEEEEEEC-CCCCceEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 99999999999999 6899999999999999999999999999765
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=4.9e-38 Score=276.46 Aligned_cols=120 Identities=33% Similarity=0.599 Sum_probs=113.9
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-----CceeeecCccCCCCCCCCCCCC-C
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
..++|++++++++|||+++.++++|| +|||+|++++||+|+|+|+|+|++ +++|||||++++..+++||+++ +
T Consensus 5 ~~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~ 83 (131)
T d1hfua1 5 SVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (131)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ccEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcccc
Confidence 36899999999999999999999999 799999999999999999999874 5899999999999999999998 9
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCC
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 148 (591)
||+|.||++|+|+|++++++||||||||++.|+++||+|+|||++++
T Consensus 84 ~~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred cceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 99999999999999987899999999999999999999999999864
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=1.1e-37 Score=274.47 Aligned_cols=119 Identities=33% Similarity=0.601 Sum_probs=114.6
Q ss_pred EEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 29 ~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
.|+|++++.+++|||+.+.+|+|||++|||+|++++||+|+|+|+|+++ +++++||||+++..++++||+++ +|
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 6899999999999999999999999999999999999999999999976 67899999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecC
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNR 147 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 147 (591)
|+|.||++|+|+|++++++||||||||++.|+.+||+|+|||+++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence 999999999999999888999999999999999999999999986
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=4.7e-34 Score=261.40 Aligned_cols=124 Identities=33% Similarity=0.562 Sum_probs=113.5
Q ss_pred CceEEEEEEEEEEE--ecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC
Q 007735 25 DLFVYFDFEVSYIT--ASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG 100 (591)
Q Consensus 25 ~~~~~~~~~v~~~~--~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~ 100 (591)
..+++|+|++++.. ++|||. ++.+|+|||++|||+|++++||+|+|+|+|+++ +.++|||||+++...+++||+++
T Consensus 31 g~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~~ 110 (162)
T d2q9oa1 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANG 110 (162)
T ss_dssp CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT
T ss_pred CeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCcc
Confidence 35799999999765 689985 567999999999999999999999999999986 78999999999999999999998
Q ss_pred -CCCcc-CCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCC
Q 007735 101 -TNCPI-PPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 101 -tq~~I-~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 149 (591)
+||+| +||++++|+|.+ +|+||||||||++.|+++||+|+|||++++.
T Consensus 111 ~~~~~i~~pg~~~~y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 111 VTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp TTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred cccceecCCCCEEEeeecC-CCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 99998 559999999998 7899999999999999999999999998764
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.5e-34 Score=254.94 Aligned_cols=122 Identities=21% Similarity=0.332 Sum_probs=111.9
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+.+..++|+|+++++...++|.+.++|+|||++|||+|++++||+|+|+++|+|+++++|||||+++. +.+||++ +
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~--~ 86 (140)
T d1kv7a1 11 TTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--Q 86 (140)
T ss_dssp CCCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--T
T ss_pred cCCCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecC--CccCCCc--c
Confidence 34556889999999999999999999999999999999999999999999999999999999999874 5799987 7
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCC
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRA 148 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~ 148 (591)
++|.||++++|+|++.+++||||||||. +.|+++||+|+|||++++
T Consensus 87 ~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 87 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 9999999999999996668999999995 479999999999999864
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=3.3e-31 Score=245.50 Aligned_cols=152 Identities=22% Similarity=0.319 Sum_probs=128.3
Q ss_pred CCCcc-eEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc
Q 007735 157 PDGDI-TILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST 235 (591)
Q Consensus 157 ~d~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~ 235 (591)
+|.|. +|+|+||||+...++......+ ..+.+|++||||++.+.|.+. +....++|++||+|||||||+|..+
T Consensus 1 YD~D~~vi~lsDW~h~~~~~~~~~~~~~-~~p~~d~~LINGkg~~~~~~~-----~~~~~~~v~~g~~~rlR~iN~~~~~ 74 (181)
T d2q9oa2 1 YDIDLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVNPNTGE-----GQYANVTLTPGKRHRLRILNTSTEN 74 (181)
T ss_dssp CSEEEEEEEEEEECSSCHHHHHHHHTTS-CCCCBSEEEETTBCBCTTTCC-----BCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCccCeeEEEEecCCCCHHHHHhhcccC-CCCCcceEEECCcCCCCCCCC-----CcceEEEECCCCEEEEEEecccCCc
Confidence 36677 8999999999887776554443 345789999999998766432 3467899999999999999999999
Q ss_pred eEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-cCCCcceEEEEEecCC
Q 007735 236 SLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNS 314 (591)
Q Consensus 236 ~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~ 314 (591)
.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|+++++++ +|||++.....+.. ...+.+..|||+|.++
T Consensus 75 ~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~-~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga 153 (181)
T d2q9oa2 75 HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 153 (181)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTCCBSSSCCEEEEEETTS
T ss_pred cEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCc-cEEEEEeccccccccCCCCCceEEEEEECCC
Confidence 999999999999999999999999999999999999999999999888 99999987543322 2245778899999876
Q ss_pred C
Q 007735 315 K 315 (591)
Q Consensus 315 ~ 315 (591)
.
T Consensus 154 ~ 154 (181)
T d2q9oa2 154 P 154 (181)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=2.1e-31 Score=244.05 Aligned_cols=152 Identities=28% Similarity=0.447 Sum_probs=126.2
Q ss_pred CCCCcceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc
Q 007735 156 TPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST 235 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~ 235 (591)
..|+|++|+|+||+|+....+.. +.+...+.|++++|||++.+.|+++ ....+.++|++|++|||||||+|..+
T Consensus 3 ~Dd~e~vi~lsDW~h~~~~~l~~--~~~~~~~~pd~~liNGkg~~~~~~~----~~~~~~~~v~~g~~~rlRlina~~~~ 76 (168)
T d1v10a2 3 VDDASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPS----AGQLAVVSVQSGKRYRFRIVSTSCFP 76 (168)
T ss_dssp BCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGG----GSCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCCCccEEEEEECCCCCHHHHHh--ccCCCCCCCceeeecCCCCcCCCCc----CCCceEEEECCCCEEEEEEEecccCc
Confidence 34578999999999997766543 2345567899999999999888665 23568999999999999999999999
Q ss_pred eEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 236 SLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 236 ~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.+.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|+++++++ +||||+.....+.. ..+....|||+|.++.
T Consensus 77 ~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~-~y~ira~~~~~~~~-~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 77 NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAA 154 (168)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCC
T ss_pred eEEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCC-cEEEEEEeccCCCc-CCCCceEEEEEECCCC
Confidence 999999999999999999999999999999999999999999999888 99999987654321 2345678999998754
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=7.3e-33 Score=262.07 Aligned_cols=156 Identities=21% Similarity=0.193 Sum_probs=122.3
Q ss_pred eEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC-CcceeeeecCceEE
Q 007735 384 RRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFF 462 (591)
Q Consensus 384 ~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~ 462 (591)
.+|+|||++|.++..|.+.+...+..... ..+.+.+++.++.++++||++.|.. .+.||||||||+||
T Consensus 35 ~~wtINg~s~~~~~~p~l~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~ 103 (200)
T d1hfua3 35 GRFTINGTAYESPSVPTLLQIMSGAQSAN-----------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 103 (200)
T ss_dssp TEEEETTBCCCCCSSCHHHHHHTTCCSGG-----------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEE
T ss_pred cEEEECCEeccCCCCChhhhhhcCCcCcc-----------cccccCceEEecCCcceEEEEeeccccccCceeecCCcEE
Confidence 37999999999999998766543211110 1123457889999999999998875 46899999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCccceEEeCC-CcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCC
Q 007735 463 VVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP-GAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEF 541 (591)
Q Consensus 463 Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp-~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~ 541 (591)
||+++++. .+++.+|.||||+.|++ |+|++|||++||||.|+|||||++|++.|||+.|.+..++.. ...
T Consensus 104 vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~--~~~ 174 (200)
T d1hfua3 104 VVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTV--DAN 174 (200)
T ss_dssp EEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHH--HHC
T ss_pred EEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCCCcEEEEEcCCCcc--ccc
Confidence 99987543 36788999999999975 569999999999999999999999999999999987654321 124
Q ss_pred CCCCCc-ccccCcCCCCCC
Q 007735 542 PIPDNA-LFCGALSHLQKP 559 (591)
Q Consensus 542 ~~p~~~-~~c~~~~~~~~~ 559 (591)
.+|++. ..|+.+...++.
T Consensus 175 ~~p~~~~~~C~~~~~~~~~ 193 (200)
T d1hfua3 175 NPPVEWAQLCEIYDDLPPE 193 (200)
T ss_dssp CCCHHHHHHHHHHHTCCHH
T ss_pred CCChhhhcccccccccCCC
Confidence 556664 679999877543
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=4.3e-31 Score=243.20 Aligned_cols=150 Identities=29% Similarity=0.556 Sum_probs=126.2
Q ss_pred CCCCCCCcceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeC
Q 007735 153 PFDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVG 232 (591)
Q Consensus 153 p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~ 232 (591)
.|+.+|+|++|+|+||||+....+. ..+.+++.+|||++.+.|.+. ...+.++|++||+|||||||+|
T Consensus 5 ~YD~dD~e~vl~l~DW~h~~~~~~~-------~~~~pd~~liNG~g~~~~~~~-----~~~~~~~v~~g~~~rlR~iN~~ 72 (172)
T d1hfua2 5 LYDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGGPA-----AELSIVNVEQGKKYRMRLISLS 72 (172)
T ss_dssp GCSBCSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBTTCCC-----CCCCEEEECTTCEEEEEEEECC
T ss_pred cCCCCCCeEEEEEEECCCCChHHhh-------ccCCCCcEEECccCccCCCCC-----CCceEEEECCCCEEEEEEeeec
Confidence 3556689999999999998765432 234689999999998766332 4568999999999999999999
Q ss_pred CcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeeccccc---ccCCCcceEEEE
Q 007735 233 ISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE---SQWKRVTGVAIL 309 (591)
Q Consensus 233 ~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~---~~~~~~~~~ail 309 (591)
..+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|+++++++ +|||++.....+. ....+.+..|||
T Consensus 73 ~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~-~Y~ira~~~~~~~~~~~~~~~~~~~aiL 151 (172)
T d1hfua2 73 CDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAIL 151 (172)
T ss_dssp SSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEE
T ss_pred CCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCC-cEEEEEEeccCcccccCcCCCceEEEEE
Confidence 999999999999999999999999999999999999999999999998888 9999998765432 223456788999
Q ss_pred EecCCC
Q 007735 310 HYTNSK 315 (591)
Q Consensus 310 ~y~~~~ 315 (591)
+|.++.
T Consensus 152 ~Y~g~~ 157 (172)
T d1hfua2 152 RYAGAA 157 (172)
T ss_dssp EETTSC
T ss_pred EECCCC
Confidence 999764
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.97 E-value=1.6e-30 Score=249.63 Aligned_cols=190 Identities=28% Similarity=0.541 Sum_probs=147.9
Q ss_pred CCCCcceEEecccccCchHHHHHHhhcC--CCCCCCceEEEcCcCCCCCCCcc------------CCCCCcceeEEEecC
Q 007735 156 TPDGDITILIGDWYTRNHTALRKTLDAG--KGLGMPDGVLINGKGPYQYNTTL------------VPDGIDYETIEVHPG 221 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~~~------------~~~~~~~~~~~v~~G 221 (591)
.+|+|++|+|+||||....++...+..+ ...+.++.++|||++.++|..+. .......+.++|++|
T Consensus 3 ~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 82 (209)
T d1aoza2 3 HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPK 82 (209)
T ss_dssp CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTT
T ss_pred CCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEEcCC
Confidence 4699999999999999877766554433 24567899999999998886431 122345788999999
Q ss_pred CEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCC
Q 007735 222 KTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK 301 (591)
Q Consensus 222 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~ 301 (591)
|+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|+++++++++||+++....... .
T Consensus 83 ~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~---~ 159 (209)
T d1aoza2 83 KTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP---N 159 (209)
T ss_dssp CEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCC---C
T ss_pred CEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999877768999988765432 2
Q ss_pred CcceEEEEEecCCCCCCC--CCCCCCCCCCcCcccccccccccccccccCCCCC
Q 007735 302 RVTGVAILHYTNSKGKAR--GPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 353 (591)
Q Consensus 302 ~~~~~ail~y~~~~~~~~--~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p 353 (591)
.....+|++|.++..... .+.|..|.. ..+++++.+.+++++++++|
T Consensus 160 ~~~~~ail~y~~~~~~~~~~~~~p~~p~~-----~D~~~a~~f~~~~~~~~~~p 208 (209)
T d1aoza2 160 TPPGLTLLNYLPNSVSKLPTSPPPQTPAW-----DDFDRSKNFTYRITAAMGSP 208 (209)
T ss_dssp SCCEEEEEEETTSCTTSCCSSCCCCCCCT-----TCHHHHHHHHTTCCBCTTCC
T ss_pred ccceeEEEEeCCCCcCCCCCCCCCCCCCc-----cchHHHHhhhhhhhccCCCC
Confidence 367889999987653221 112222221 14566777888887766554
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=3.7e-32 Score=256.39 Aligned_cols=164 Identities=19% Similarity=0.175 Sum_probs=120.8
Q ss_pred eeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEe
Q 007735 366 VTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQ 445 (591)
Q Consensus 366 ~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~ 445 (591)
+++++.+.... ..+..+|+|||++|.+++.|++...+.+..... .......++.+..++++++++.
T Consensus 22 ~d~~~~~~~~~---~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~ 87 (190)
T d1v10a3 22 ADINLNLRIGR---NATTADFTINGAPFIPPTVPVLLQILSGVTNPN-----------DLLPGGAVISLPANQVIEISIP 87 (190)
T ss_dssp SSEEEECCEEC---CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGG-----------GSSSTTTEEEECTTCEEEEEEE
T ss_pred CCEEEEEEEEe---cCCEeEEEECCEecCCCCCchHHHhhcCCcccc-----------cccccceeEEccCccEEEEEec
Confidence 45566555432 223567999999999999998876543211110 0112345677888999999888
Q ss_pred cCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCc-EEEEEEEeCCccceeeecccccchhccc
Q 007735 446 NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGA-WTAILVSLDNVGIWNLRTENLDSWYLGQ 524 (591)
Q Consensus 446 N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g-~~~irf~adNpG~W~~HCHil~H~~~GM 524 (591)
| .+.||||||||+|+|++++++. .+++.+|+||||+.|+++| |++|||++||||.|+|||||++|++.||
T Consensus 88 ~--~~~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM 158 (190)
T d1v10a3 88 G--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGL 158 (190)
T ss_dssp C--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTC
T ss_pred c--CccccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhhCCC
Confidence 7 4789999999999999986432 3678899999999999976 8889999999999999999999999999
Q ss_pred eEEEEEecCCCCCCCCCCCCCC-cccccCcC
Q 007735 525 ETYVRVVNPEATNKTEFPIPDN-ALFCGALS 554 (591)
Q Consensus 525 ~~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~ 554 (591)
|+.|.+..++- .+ ..++|+. ...|..+.
T Consensus 159 ~~~~~~~~~~~-~~-~~~~~~~~~~~c~~~~ 187 (190)
T d1v10a3 159 AVVFAEDIPNI-PI-ANAISPAWDDLCPKYN 187 (190)
T ss_dssp EEEEEESGGGH-HH-HSCCCHHHHTHHHHHT
T ss_pred cEEEEECCCCC-Cc-cCCCCHHHHhhhhhcc
Confidence 99998754432 11 1233333 45787664
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.97 E-value=5.8e-32 Score=255.84 Aligned_cols=152 Identities=22% Similarity=0.225 Sum_probs=118.2
Q ss_pred eEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC---CcceeeeecCce
Q 007735 384 RRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND---TKMHAYHMSGYA 460 (591)
Q Consensus 384 ~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~---~~~HPfHlHG~~ 460 (591)
.+|+|||++|.+|+.|.+++...+.... ...+.+.+++.++.++++|+++.|.. ...||||||||+
T Consensus 35 ~~~~iNg~sf~~p~~p~l~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~ 103 (199)
T d1gyca3 35 TNFFINNASFTPPTVPVLLQILSGAQTA-----------QDLLPAGSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHA 103 (199)
T ss_dssp SCEEETTBCCCCCSSCHHHHHHTTCCST-----------TTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCC
T ss_pred ceEEECCEecCCCCcchHHHHhcCCCCc-----------ccccccCceEEeccCceeEEEeecccccCCCceeeeecCCc
Confidence 4799999999999999887654321111 12233567788899999999998754 457999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCccceEEe---CCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCC
Q 007735 461 FFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV---YPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATN 537 (591)
Q Consensus 461 F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V---pp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~ 537 (591)
|+||+++++. .+++.+|.+|||+.+ ++++|++|||++||||.|+||||+++|++.|||+.+.+ .+++..
T Consensus 104 F~vv~~~~~~-------~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~-~~~~~~ 175 (199)
T d1gyca3 104 FAVVRSAGST-------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAE-DVADVK 175 (199)
T ss_dssp EEEEECTTCC-------CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEE-THHHHH
T ss_pred EEEEeecCCC-------ccCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchhhHhccCcEEEEE-cCCccc
Confidence 9999997653 367788999999887 78999999999999999999999999999999998844 333221
Q ss_pred CCCCCCCCCcc-cccCcCC
Q 007735 538 KTEFPIPDNAL-FCGALSH 555 (591)
Q Consensus 538 ~~~~~~p~~~~-~c~~~~~ 555 (591)
...++|+... .|+.+..
T Consensus 176 -~~~~~p~~~~~~C~~~~~ 193 (199)
T d1gyca3 176 -AANPVPKAWSDLCPIYDG 193 (199)
T ss_dssp -HHCCCCHHHHHHHHHHHT
T ss_pred -ccCCCCHHHHhhhhhhcc
Confidence 2245677765 7988754
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=6.5e-31 Score=239.22 Aligned_cols=120 Identities=22% Similarity=0.293 Sum_probs=102.3
Q ss_pred CceEEEEEEEEEEEecCC--CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-C
Q 007735 25 DLFVYFDFEVSYITASPL--GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~d--G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
...++|+|++++..+.++ |....+|+|||++|||+|++++||+|+|+|+|.++ ++||||++..+ .++++.+ +
T Consensus 30 ~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~---~~h~h~ih~hg--~~~~~~g~~ 104 (159)
T d1oe2a1 30 PKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVEFHG--ATGALGGAK 104 (159)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETT--SCSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCc---cccccceeecc--ccCCCCCcc
Confidence 346899999999987765 88999999999999999999999999999999985 34555554443 2566666 7
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecC----hhhhhhcCceeeEEEecCCCC
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPS----LHFQRASGGFGGFIINNRAII 150 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~ 150 (591)
+++|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++..
T Consensus 105 ~~~I~PG~t~ty~f~a-~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 105 LTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred cccCCCCCeEEEEEEc-CCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 8999999999999999 68999999999 457999999999999987764
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=3e-31 Score=254.14 Aligned_cols=160 Identities=16% Similarity=0.151 Sum_probs=115.1
Q ss_pred CeeEEEEcCeecc-CCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccC-CcEEEEEEec----CCCcceeee
Q 007735 382 GKRRATLSGISFV-NPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY-RGFMEVILQN----NDTKMHAYH 455 (591)
Q Consensus 382 g~~~~~iNg~s~~-~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vl~N----~~~~~HPfH 455 (591)
...+|+|||++|. +++.|+|+....+.. .+ + ...++..+.. +.+..+++++ .....||||
T Consensus 26 ~~~~w~iNg~s~~~d~~~P~L~~~~~~~~-~~-------~------~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~H 91 (216)
T d2q9oa3 26 PLFVWKVNGSDINVDWGKPIIDYILTGNT-SY-------P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMH 91 (216)
T ss_dssp SSCEEEETTBCCCCCTTSCHHHHHHHTCC-CC-------C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEE
T ss_pred cEEEEEECCEecccCCCCCChhhhhcCCc-cc-------c------cccceeeccccccceeEEEEeccCCcccccccee
Confidence 4468999999985 788898765432110 00 0 1123333333 3444444444 335689999
Q ss_pred ecCceEEEEEEcCCCCCCCC----------CCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccce
Q 007735 456 MSGYAFFVVGMDYGEWTDNS----------RGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQE 525 (591)
Q Consensus 456 lHG~~F~Vv~~g~g~~~~~~----------~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~ 525 (591)
||||+||||+++.+.+.... ...+|+.+|+||||+.|+|+||++|||++||||.|+|||||++|++.|||
T Consensus 92 lHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~ 171 (216)
T d2q9oa3 92 LHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLS 171 (216)
T ss_dssp ESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCE
T ss_pred ecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEccCCcccccCCe
Confidence 99999999999988765432 13578999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCC-CCCC-CCcccccCcCCC
Q 007735 526 TYVRVVNPEATNKTE-FPIP-DNALFCGALSHL 556 (591)
Q Consensus 526 ~~~~V~~p~~~~~~~-~~~p-~~~~~c~~~~~~ 556 (591)
+.+ |+.|++..+.. ..+| +....|.+|+..
T Consensus 172 ~~~-~~~p~~~~~~~~~~~~~~~~~~C~~w~~~ 203 (216)
T d2q9oa3 172 VDF-LERPADLRQRISQEDEDDFNRVCDEWRAY 203 (216)
T ss_dssp EEE-EECHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEE-EEcchhhhhcccCCCchhhhccChhhccc
Confidence 998 66665443211 2234 345799988764
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=2.7e-30 Score=234.81 Aligned_cols=119 Identities=21% Similarity=0.289 Sum_probs=104.3
Q ss_pred CceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-C
Q 007735 25 DLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
...++|++++++.+.. ++|+..++|+|||++|||+|+|++||+|+|+|+|. ..++||||+++.+. +||.++ +
T Consensus 29 ~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~~~~ 103 (157)
T d2bw4a1 29 PRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALGGGA 103 (157)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcCCcc
Confidence 3568999999977664 67999999999999999999999999999999996 56889999988754 555555 6
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecC----hhhhhhcCceeeEEEecCCC
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPS----LHFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~ 149 (591)
.++|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.
T Consensus 104 ~~~i~PGet~ty~f~a-~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e~ 154 (157)
T d2bw4a1 104 LTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDG 154 (157)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBC
T ss_pred eeeECcCCEEeEEEEC-CCCccceEEECCCCchHHHHhCCCEEEEEEeCCCC
Confidence 7789999999999999 68999999999 45799999999999998764
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.7e-30 Score=234.45 Aligned_cols=132 Identities=12% Similarity=-0.012 Sum_probs=102.6
Q ss_pred eeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEe
Q 007735 366 VTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQ 445 (591)
Q Consensus 366 ~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~ 445 (591)
-.|++.|.... ...|+..|+|||.+|.+|.. ..++.|++++|.|.
T Consensus 12 ~~r~~~l~~~~--~~~g~~~~~ing~~~~~~~~---------------------------------~~~~~G~~e~W~i~ 56 (154)
T d1gska3 12 NIRTLKLAGTQ--DEYGRPVLLLNNKRWHDPVT---------------------------------ETPKVGTTEIWSII 56 (154)
T ss_dssp EEEEEEEEEEE--CTTSCEEEEETTBCTTSCCC---------------------------------BCCBTTCEEEEEEE
T ss_pred eEEEEEEcccc--cccCCceEEECCcCcCCCcc---------------------------------cccCCCCEEEEEEE
Confidence 34555554432 34566679999998853311 12357999999999
Q ss_pred cCCCcceeeeecCceEEEEEEcCCCCCC----------CCCCCCCCCCCCccceEEeCCCcEEEEEEE-eCCccceeeec
Q 007735 446 NNDTKMHAYHMSGYAFFVVGMDYGEWTD----------NSRGTYNKWDGIARTTTQVYPGAWTAILVS-LDNVGIWNLRT 514 (591)
Q Consensus 446 N~~~~~HPfHlHG~~F~Vv~~g~g~~~~----------~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~-adNpG~W~~HC 514 (591)
|.+.+.|||||||++||||+++.+.+.. .........++.||||+.|+|+++++|||+ +||||.|+|||
T Consensus 57 N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HC 136 (154)
T d1gska3 57 NPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC 136 (154)
T ss_dssp ECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred eCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEec
Confidence 9999999999999999999997643211 011123455678999999999999999998 79999999999
Q ss_pred ccccchhccceEEEEEec
Q 007735 515 ENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~~ 532 (591)
||++|+|.|||..++|++
T Consensus 137 Hil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 137 HILEHEDYDMMRPMDITD 154 (154)
T ss_dssp SCHHHHTTTCEEEEEEBC
T ss_pred CcchHhhCcCceEEEEeC
Confidence 999999999999999864
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=1.9e-29 Score=231.49 Aligned_cols=149 Identities=27% Similarity=0.441 Sum_probs=122.1
Q ss_pred CCCCCCcceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCC
Q 007735 154 FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI 233 (591)
Q Consensus 154 ~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 233 (591)
|+..++|.+|+|+||||+.... .+.....++..+|||++.+.|.. ....+.++|++||+|||||||+|.
T Consensus 7 YD~D~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~~~~~~-----~~~~~~~~v~~g~~~rlRlIN~~~ 75 (170)
T d1gyca2 7 YDVDNESTVITLTDWYHTAARL------GPRFPLGADATLINGLGRSASTP-----TAALAVINVQHGKRYRFRLVSISC 75 (170)
T ss_dssp CSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCBTTCT-----TSCCCEEEECTTCEEEEEEEECCS
T ss_pred CCCCCCceEEEEeecCCChhhh------cccCCCcCCcccccCccccCCCC-----CCCceEEEECCCCEEEEEEeecCC
Confidence 4333467899999999975421 23334568999999999765422 245689999999999999999999
Q ss_pred cceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 234 STSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 234 ~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|+++++++ +||||+.....+.. ..+....|||+|.+
T Consensus 76 ~~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~-~y~ira~~~~~~~~-~~~~~~~aiL~Y~~ 153 (170)
T d1gyca2 76 DPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG-NYWIRANPNFGTVG-FAGGINSAILRYQG 153 (170)
T ss_dssp SCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETT
T ss_pred CceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCC-cEEEEEeccccccc-cCCCeeEEEEEECC
Confidence 99999999999999999999999999999999999999999999998888 99999987654322 23345689999987
Q ss_pred CC
Q 007735 314 SK 315 (591)
Q Consensus 314 ~~ 315 (591)
+.
T Consensus 154 a~ 155 (170)
T d1gyca2 154 AP 155 (170)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.3e-29 Score=234.85 Aligned_cols=126 Identities=23% Similarity=0.319 Sum_probs=106.6
Q ss_pred ccCCceEEEEEEEEEEEe--cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC---------------------
Q 007735 22 SAADLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE--------------------- 78 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~--------------------- 78 (591)
+.....++|++++++... .+||.++++|+|||++|||+|+|++||+|+|+++|+|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~ 98 (181)
T d1gska1 19 QQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPE 98 (181)
T ss_dssp EECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCS
T ss_pred ccCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCC
Confidence 344567899999998775 468889999999999999999999999999999999953
Q ss_pred -CceeeecCccCCCCCCCCCCCC---CCC---ccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecC
Q 007735 79 -SLLIHWSGIQQRRSSWQDGLLG---TNC---PIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNR 147 (591)
Q Consensus 79 -~~siH~HG~~~~~~~~~DGv~~---tq~---~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~ 147 (591)
+++|||||+++. +.+||.+. +++ ++.+|++++|+|.+.+++||||||||. +.|+.+||+|+|||+++
T Consensus 99 ~~t~iH~HG~~~~--~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~ 176 (181)
T d1gska1 99 VKTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 176 (181)
T ss_dssp CCBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred CcceeeeeccccC--CccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCc
Confidence 589999999764 67999873 444 455667889999997678999999995 57999999999999986
Q ss_pred CC
Q 007735 148 AI 149 (591)
Q Consensus 148 ~~ 149 (591)
++
T Consensus 177 ~~ 178 (181)
T d1gska1 177 KE 178 (181)
T ss_dssp GG
T ss_pred cc
Confidence 54
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=4.3e-29 Score=225.98 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=99.4
Q ss_pred CCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
...+++|+|++++.++.. +|...++|+|||++|||+|++++||+|+|+|+|.++ .+..||||+ .+...+||.. ..
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~--h~~~~~~~~~-~~ 102 (153)
T d1mzya1 27 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDF--HAATGALGGG-GL 102 (153)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEE--TTSCSGGGGG-GG
T ss_pred CCeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCcc--ccCCcCCCCC-cc
Confidence 334689999999999975 689999999999999999999999999999999843 344555555 3334455543 34
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecCh-----hhhhhcCceeeEEEecCC
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSL-----HFQRASGGFGGFIINNRA 148 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-----~~q~~~Gl~G~liV~~~~ 148 (591)
++|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++
T Consensus 103 ~~i~PG~t~ty~f~a-~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 103 TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred ccccCCCEEEEEEEc-CCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 689999999999999 799999999994 368999999999999875
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.95 E-value=1e-28 Score=223.44 Aligned_cols=122 Identities=20% Similarity=0.220 Sum_probs=103.4
Q ss_pred cCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGT 101 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~t 101 (591)
....+.++++++.+.+... +|..+.+|+|||++|||+|++++||+|+|+|+|+ ..++||||+++....+.||.. +
T Consensus 22 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~---~~~~~~H~~~~h~~~~~~~~~-~ 97 (151)
T d1kbva1 22 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNN---PSSTVPHNVDFHAATGQGGGA-A 97 (151)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEEC---TTCSSCBCCEETTCCSGGGGT-T
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcC---CCCceeeeccccccccCCCCc-c
Confidence 3445678899988877654 6999999999999999999999999999999997 445788888777666666532 6
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecCh---hhhhhcCceeeEEEecCCC
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~ 149 (591)
++.|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++.
T Consensus 98 ~~~i~PG~t~~y~f~a-~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 98 ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC
T ss_pred eeeeCCCCEEEEEEeC-CCCeEEEEECCCCChHHHHhCCCEEEEEEECCCC
Confidence 7889999999999999 689999999994 4699999999999998754
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.1e-25 Score=207.76 Aligned_cols=91 Identities=11% Similarity=0.076 Sum_probs=76.7
Q ss_pred EeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcE-EEEEEEeC--Cc
Q 007735 432 INGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAW-TAILVSLD--NV 507 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~-~~irf~ad--Np 507 (591)
+.++.|++|+|+|.|.++ ..|||||||+.|+|++++++... ..++.|||||.|+|+++ ++|+|.++ ++
T Consensus 87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~ 158 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFNHDAPKE 158 (181)
T ss_dssp EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence 456789999999999875 58999999999999999755332 23478999999998764 57888765 56
Q ss_pred cceeeecccccchhccceEEEEE
Q 007735 508 GIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 508 G~W~~HCHil~H~~~GM~~~~~V 530 (591)
|.|+||||||+|++.|||..|+|
T Consensus 159 G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 159 HAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp GCEEEEESSHHHHHTTCEEEEEC
T ss_pred CeEEEeCChHHHHhCCCCEEEEC
Confidence 99999999999999999999986
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.91 E-value=2.8e-24 Score=198.42 Aligned_cols=95 Identities=23% Similarity=0.420 Sum_probs=82.8
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC----CCCCCCCCCC---CCCccCCCCcEEEEEEeCC--------
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLLG---TNCPIPPKWNWTYQFQVKD-------- 119 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~-------- 119 (591)
+|||+||+++||+|+|+|+|.++++++|||||+.+. +..+.||++. .+++|+||++|+|+|++++
T Consensus 57 ~~GP~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d 136 (180)
T d1sdda1 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136 (180)
T ss_dssp SCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSS
T ss_pred CcCCeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCC
Confidence 699999999999999999999999999999999764 3346777774 4568999999999999964
Q ss_pred -ceeeeEEecChh--hhhhcCceeeEEEecCCC
Q 007735 120 -QVGSFFYFPSLH--FQRASGGFGGFIINNRAI 149 (591)
Q Consensus 120 -~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~ 149 (591)
++||||||||.. .|+.+||+|+|||+++..
T Consensus 137 ~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~ 169 (180)
T d1sdda1 137 PPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGT 169 (180)
T ss_dssp CSEEEEEEECCSSSHHHHHTTCCEEEEEECTTC
T ss_pred CCCEEEEEecCCCcHHHhhCCceEEEEEccCCC
Confidence 358999999965 589999999999999765
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=9e-24 Score=198.93 Aligned_cols=95 Identities=21% Similarity=0.357 Sum_probs=79.1
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCC----CCC------CCCCCC-CCCccCCCCcEEEEEEeCCcee-
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR----SSW------QDGLLG-TNCPIPPKWNWTYQFQVKDQVG- 122 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~----~~~------~DGv~~-tq~~I~PG~~~~Y~f~~~~~~G- 122 (591)
++||+|++++||+|+|+|+|.++++++|||||+.+.. .++ .+|... ++|+|.||++|+|+|+++++.|
T Consensus 83 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~gP 162 (207)
T d2j5wa3 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGP 162 (207)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGGSC
T ss_pred CcCceEEEECCCEEEEEEEECCCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCCCC
Confidence 7899999999999999999999999999999997532 222 233333 6899999999999999976555
Q ss_pred --------eeEEecChh--hhhhcCceeeEEEecCCC
Q 007735 123 --------SFFYFPSLH--FQRASGGFGGFIINNRAI 149 (591)
Q Consensus 123 --------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 149 (591)
|||||||.. .|..+||+|+|||+++..
T Consensus 163 ~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 163 TNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred ccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 999999975 577999999999998765
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=5.4e-23 Score=192.39 Aligned_cols=95 Identities=23% Similarity=0.366 Sum_probs=83.0
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCC----CCCCCCCCC---CCCccCCCCcEEEEEEeCC--------
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR----SSWQDGLLG---TNCPIPPKWNWTYQFQVKD-------- 119 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~----~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~-------- 119 (591)
+|||+|+|++||+|+|+|+|+++++++|||||+++.. ....||... ++++|+||++++|+|++++
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~d 152 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccCC
Confidence 7999999999999999999999999999999998743 345666653 6789999999999999964
Q ss_pred -ceeeeEEecChh--hhhhcCceeeEEEecCCC
Q 007735 120 -QVGSFFYFPSLH--FQRASGGFGGFIINNRAI 149 (591)
Q Consensus 120 -~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~ 149 (591)
++||||||||.. .|+.+||+|+|||+++..
T Consensus 153 ~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 368999999965 599999999999999764
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=2.2e-22 Score=183.61 Aligned_cols=117 Identities=19% Similarity=0.235 Sum_probs=93.0
Q ss_pred CCCcceEEecccccCchHHHHHH--hhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc
Q 007735 157 PDGDITILIGDWYTRNHTALRKT--LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS 234 (591)
Q Consensus 157 ~d~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 234 (591)
+.+|++|+|+||+++.++.+... .........++.++|||+.. |.+.++ |++|||||||+|..
T Consensus 7 g~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~~~-~~~~RlR~iNa~~~ 71 (165)
T d1kv7a2 7 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY--------------PQHAAP-RGWLRLRLLNGCNA 71 (165)
T ss_dssp TTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSS--------------CEEEEE-EEEEEEEEEECCSS
T ss_pred CCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCccc--------------ceEecc-CcEEEEEEEEcccC
Confidence 45789999999998765543210 00001123468999999987 888886 67999999999999
Q ss_pred ceEEEEE-eCCeeEEEeecCCce-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEE
Q 007735 235 TSLNFRI-QNHNLLLAETEGSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVA 290 (591)
Q Consensus 235 ~~~~~~i-~gh~~~via~DG~~~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~ 290 (591)
+.++|++ +||+|+||+.||+++ +|..++++.|+|||||||+|++++. + .|.++.
T Consensus 72 ~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~-~-~~~~~~ 127 (165)
T d1kv7a2 72 RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDN-K-PFDLVT 127 (165)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECTT-C-CEEEEE
T ss_pred ceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCCC-C-cEEEEE
Confidence 9999998 699999999999998 6999999999999999999999864 3 444444
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.4e-22 Score=183.19 Aligned_cols=85 Identities=22% Similarity=0.414 Sum_probs=75.0
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCcee---------eeE
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVG---------SFF 125 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G---------t~w 125 (591)
++||+|++++||+|+|+|+|.++++++|||||+.+.. .+ +++|.||++++|+|+++++.| |||
T Consensus 83 ~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~--~~------~~~v~PGet~tY~w~v~~~~gp~~~d~~c~t~~ 154 (179)
T d2j5wa4 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTES--ST------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWA 154 (179)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSC--SC------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEE
T ss_pred ccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCC--CC------CCcccCCccEEEEEEecCccCCccCCCCceeEE
Confidence 6799999999999999999999999999999997643 23 468999999999999975554 999
Q ss_pred EecChh--hhhhcCceeeEEEecC
Q 007735 126 YFPSLH--FQRASGGFGGFIINNR 147 (591)
Q Consensus 126 YH~H~~--~q~~~Gl~G~liV~~~ 147 (591)
||||.. .|..+||+|+|||+.+
T Consensus 155 YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 155 YYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EECCTTHHHHHHTTCEEEEEEECC
T ss_pred EecCCCcHHHhhCCCeEEEEEEeC
Confidence 999986 5788999999999975
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.2e-22 Score=181.47 Aligned_cols=84 Identities=19% Similarity=0.267 Sum_probs=75.0
Q ss_pred eccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 433 NGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 433 ~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++.|+.|+|.|.|.+. +.||||+||+.|++... .+.+|||+.|+||++++++|++||||.|
T Consensus 63 ~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~----------------g~~~~dtv~i~pg~~~~~~~~a~~pG~w 126 (149)
T d2j5wa5 63 TMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHR----------------GVYSSDVFDIFPGTYQTLEMFPRTPGIW 126 (149)
T ss_dssp EEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTT----------------TCEEESEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEcCCcEEEEEEecCCCCCccceEEEeeEeeeecc----------------CCCCcceEEECCCceEEEEEeCCCCeeE
Confidence 45679999999999753 58999999999987432 2468999999999999999999999999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
+||||+++|++.|||..+.|++
T Consensus 127 ~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 127 LLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEECCHHHHHTTCEEEEEEEC
T ss_pred EEEcCCHHHHhccCceEEEEec
Confidence 9999999999999999999874
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.5e-21 Score=179.57 Aligned_cols=141 Identities=18% Similarity=0.277 Sum_probs=104.7
Q ss_pred CCCcceEEecccccCchHHHHHHhh-----------cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEE
Q 007735 157 PDGDITILIGDWYTRNHTALRKTLD-----------AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYR 225 (591)
Q Consensus 157 ~d~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~r 225 (591)
++.|++|+|+||+++.++++..... .......++.++|||+.+ |.+++++ ++||
T Consensus 5 gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~--------------p~~~v~~-~~~R 69 (174)
T d1gska2 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP-RKYR 69 (174)
T ss_dssp GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS-SEEE
T ss_pred CCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccc--------------eEEEecC-ceEE
Confidence 5789999999999886655421100 001123458899999987 8899875 6799
Q ss_pred EEEeEeCCcceEEEEEe-CCeeEEEeecCCcee-eeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCc
Q 007735 226 IRVHNVGISTSLNFRIQ-NHNLLLAETEGSYTV-QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRV 303 (591)
Q Consensus 226 lRliN~~~~~~~~~~i~-gh~~~via~DG~~~~-p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~ 303 (591)
|||||+|..+.+.|+|+ ||+|+|||+||++++ |+.++++.|+|||||||+|++++.+| .+++..+..... ......
T Consensus 70 lRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g-~~~~l~~~~~~~-~~~~~~ 147 (174)
T d1gska2 70 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG-ESIILANSAGCG-GDVNPE 147 (174)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTT-CEEEEEECCCSS-SCCCTT
T ss_pred EEEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCC-ceEEEEccCCCC-CccCCC
Confidence 99999999999999995 889999999999984 99999999999999999999998777 555444332211 111223
Q ss_pred ceEEEEEecCC
Q 007735 304 TGVAILHYTNS 314 (591)
Q Consensus 304 ~~~ail~y~~~ 314 (591)
....+++|..+
T Consensus 148 ~~~~vl~~~v~ 158 (174)
T d1gska2 148 TDANIMQFRVT 158 (174)
T ss_dssp TTTEEEEEECC
T ss_pred CCcceEEEEec
Confidence 34467777644
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.83 E-value=4.2e-21 Score=173.94 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=86.6
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECC---CCCceeeecCccCCC--CCCCCCCCC-CCCccCCCCcEEEEE
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKL---DESLLIHWSGIQQRR--SSWQDGLLG-TNCPIPPKWNWTYQF 115 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~--~~~~DGv~~-tq~~I~PG~~~~Y~f 115 (591)
.|.....+.+||+ |||+|+|++||+|+|+|+|.. +.++.||+||..... ....++.+. .++.+.||++++|.|
T Consensus 45 ~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f 123 (153)
T d1e30a_ 45 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNF 123 (153)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEE
T ss_pred cccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEE
Confidence 4888888999997 799999999999999999973 456778888865432 122333333 689999999999999
Q ss_pred EeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 116 QVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
++++++||||||||...|+..||+|.|||+
T Consensus 124 ~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 124 TWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 988899999999999999999999999996
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=8.3e-21 Score=168.80 Aligned_cols=82 Identities=20% Similarity=0.266 Sum_probs=73.0
Q ss_pred ccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 434 GTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 434 ~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+..|+.|+|.|.|.+ ...||+|+||+.|.+.+.+ +.++||+.|+||++.+++|++||||.|+
T Consensus 56 v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~~pG~w~ 119 (139)
T d1sddb2 56 MYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWL 119 (139)
T ss_dssp EETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEE
T ss_pred cccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecCCCEeEE
Confidence 456999999999975 3579999999999875432 4579999999999999999999999999
Q ss_pred eecccccchhccceEEEEEe
Q 007735 512 LRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHil~H~~~GM~~~~~V~ 531 (591)
||||+++|++.|||..+.|+
T Consensus 120 ~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 120 LDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EECCCHHHHTTTCEEEEEEE
T ss_pred EEeCCHHHHhccCcEEEEEC
Confidence 99999999999999999885
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8.8e-21 Score=169.91 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=72.3
Q ss_pred eccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 433 NGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 433 ~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++.|++|+|.|.|.+ ...||||+||+.|++. ..++||+.|+||++..++|++|+||.|
T Consensus 62 ~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~-------------------~~~~dt~~i~pg~~~t~~~~a~~pG~w 122 (145)
T d2j5wa2 62 TMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWR-------------------GERRDTANLFPQTSLTLHMWPDTEGTF 122 (145)
T ss_dssp EEETTCCEEEEEECCCSTTCCEEEEETTCCEEET-------------------TEEESEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEcCCeEEEEEEecCCCCcccceEecccEEEec-------------------ccCccceEECCCCEEEEEEEcCCCEeE
Confidence 4568999999999965 3579999999999873 246899999999999999999999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
+||||+++|++.|||..++|.
T Consensus 123 ~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 123 NVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp EEEECSHHHHHTTCEEEEEEE
T ss_pred EEEcCCHHHHhCCCeEEEEEe
Confidence 999999999999999999985
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.82 E-value=6.4e-22 Score=170.29 Aligned_cols=77 Identities=10% Similarity=0.157 Sum_probs=55.0
Q ss_pred eccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 433 NGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 433 ~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
+++.|++|+|.|.|.+ ...||+|+||+.|++. +.++||+.|+|++..+++|++||||.|
T Consensus 38 ~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~w 98 (116)
T d1sdda2 38 TVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGRW 98 (116)
T ss_dssp CCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CCC
T ss_pred EEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeEE
Confidence 4567999999999965 5689999999999772 347999999999999999999999999
Q ss_pred eeecccccchhccceEEE
Q 007735 511 NLRTENLDSWYLGQETYV 528 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~ 528 (591)
+||||+++|++.|||.++
T Consensus 99 ~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 99 TIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCBCCSTTTGGGTCBCCC
T ss_pred EEEcCCHHHHHccceecC
Confidence 999999999999999753
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.80 E-value=3.3e-20 Score=166.84 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=79.2
Q ss_pred EeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 432 INGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
+.++.|++|+|.|.|.. ...||||+||++|+++..+++.+. ...+||+.|+||++.+++|++||||.|
T Consensus 53 l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~-----------~~~~~T~~v~pg~~~~~~f~a~~PG~y 121 (151)
T d1kbva2 53 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI-----------NENVQSTIVPAGGSAIVEFKVDIPGNY 121 (151)
T ss_dssp EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE-----------ECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred eEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcCC-----------cccceeEecccCceeEEeeecCCCceE
Confidence 56678999999999964 568999999999999977543221 235899999999999999999999999
Q ss_pred eeecccc-cchhccceEEEEEecCCC
Q 007735 511 NLRTENL-DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 511 ~~HCHil-~H~~~GM~~~~~V~~p~~ 535 (591)
+||||.+ +|+++|||..++|..+++
T Consensus 122 ~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 122 TLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9999986 457999999999987764
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=9.8e-20 Score=163.44 Aligned_cols=81 Identities=19% Similarity=0.268 Sum_probs=72.7
Q ss_pred EeccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 432 INGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.++.|++|+|.|.|.+ ...||+|+||+.|.+ ++.++||+.|+||++.+++|++||||.
T Consensus 62 l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~~pG~ 122 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQNPGE 122 (146)
T ss_dssp CEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEECSCEE
T ss_pred ceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcCCCee
Confidence 45678999999999975 357999999998832 356899999999999999999999999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|+||||++.|.+.||+..++|.
T Consensus 123 w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 123 WMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp EEEEECCHHHHHTCCEEEEEEE
T ss_pred EEEEcCCHHHHhcCCeEEEEEE
Confidence 9999999999999999999996
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.66 E-value=9.1e-17 Score=142.31 Aligned_cols=96 Identities=17% Similarity=0.174 Sum_probs=83.2
Q ss_pred eEEEEECCC-CCCCcEEeeCCCEEEEEEEECC--CCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCce
Q 007735 46 QQVIAINGK-FPGPTINVTTNNNVVVNVRNKL--DESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 46 ~~~~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l--~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
-.+++|||. ++.|.|++++||+|+++|.|.. ++.+++||||..... ..+|... ..++|.||++++|+|++ +++
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~~-~~p 115 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMKA-SKP 115 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEEC-CSS
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEec-CCC
Confidence 468999997 4899999999999999999964 456899999986642 3455544 67899999999999998 689
Q ss_pred eeeEEecChhhhhhcCceeeEEE
Q 007735 122 GSFFYFPSLHFQRASGGFGGFII 144 (591)
Q Consensus 122 Gt~wYH~H~~~q~~~Gl~G~liV 144 (591)
|+||||||...+...||.|.++|
T Consensus 116 G~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 116 GWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEE
T ss_pred EeEEEEeCCHHHHhccCcEEEEE
Confidence 99999999999999999999987
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=4.5e-17 Score=145.43 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=82.3
Q ss_pred EEEEECCCCCC--CcEEeeCCCEEEEEEEECC--CCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCcee
Q 007735 47 QVIAINGKFPG--PTINVTTNNNVVVNVRNKL--DESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVG 122 (591)
Q Consensus 47 ~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 122 (591)
.+++|||+.+| |.|++++||+|++++.|.. +..+++|+||..... ++.....+.|.||++.+|+|++ +.+|
T Consensus 46 ~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~~~dt~~i~pg~~~t~~~~a-~~pG 120 (145)
T d2j5wa2 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGERRDTANLFPQTSLTLHMWP-DTEG 120 (145)
T ss_dssp EEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTEEESEEEECTTCEEEEEECC-CSCE
T ss_pred ceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cccCccceEECCCCEEEEEEEc-CCCE
Confidence 78999999999 9999999999999999964 456899999986532 2222245789999999999998 6899
Q ss_pred eeEEecChhhhhhcCceeeEEEec
Q 007735 123 SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 123 t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
+||||||...++..||.|.++|+.
T Consensus 121 ~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 121 TFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhCCCeEEEEEec
Confidence 999999999999999999999973
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.3e-16 Score=142.79 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=82.2
Q ss_pred EEEEECCCCCC--CcEEeeCCCEEEEEEEECC--CCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCcee
Q 007735 47 QVIAINGKFPG--PTINVTTNNNVVVNVRNKL--DESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVG 122 (591)
Q Consensus 47 ~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 122 (591)
.+++|||+.+| |.|++++||+|+++|.|.. +..+++||||..... ++.....++|.||++++|+|++ +++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~----~~~~~dt~~i~pg~~~~v~f~~-~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN----KNYRIDTINLFPATLFDAYMVA-QNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC----SSSCCSEEEECTTCEEEEEEEE-CSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeec----cCCCcceEEecCCCEEEEEEEc-CCCe
Confidence 67999999999 9999999999999999975 356899999986532 2222245789999999999998 6899
Q ss_pred eeEEecChhhhhhcCceeeEEEec
Q 007735 123 SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 123 t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
+||||||...++.+||.|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999974
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.66 E-value=9.2e-17 Score=144.03 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=83.7
Q ss_pred EEEEECCCCCCCc----EEeeCCCEEEEEEEECC-CCCceeeecCccCCCCCCCCCCC----C-CCCccCCCCcEEEEEE
Q 007735 47 QVIAINGKFPGPT----INVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGLL----G-TNCPIPPKWNWTYQFQ 116 (591)
Q Consensus 47 ~~~~~Ng~~pgP~----i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~----~-tq~~I~PG~~~~Y~f~ 116 (591)
..+.|||+.++++ |++++||+|+|++.|.. .+++++|+||.+... .|.||.+ . ..+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~-v~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK-VYVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeE-EecCCCcCCcccceeEecccCceeEEeee
Confidence 3589999988765 99999999999999964 468999999997643 3667754 2 3467999999999999
Q ss_pred eCCceeeeEEecChhhh-hhcCceeeEEEecCCC
Q 007735 117 VKDQVGSFFYFPSLHFQ-RASGGFGGFIINNRAI 149 (591)
Q Consensus 117 ~~~~~Gt~wYH~H~~~q-~~~Gl~G~liV~~~~~ 149 (591)
+ +++|+||||||.-.+ ...||.|.|+|+++++
T Consensus 115 a-~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 V-DIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp E-CSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred c-CCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9 689999999996544 5679999999998754
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.2e-16 Score=143.41 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=86.4
Q ss_pred eEEEEECCCCCC--CcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCc
Q 007735 46 QQVIAINGKFPG--PTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQ 120 (591)
Q Consensus 46 ~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~ 120 (591)
..+++|||+.+| |.|++++||+|+++|.|... ..+++|+||..+. ...||.+. ..+.|.||++.+|+|++ +.
T Consensus 46 ~~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~--~~~~g~~~~dtv~i~pg~~~~~~~~a-~~ 122 (149)
T d2j5wa5 46 NKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQ--YKHRGVYSSDVFDIFPGTYQTLEMFP-RT 122 (149)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEE--ETTTTCEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEee--eeccCCCCcceEEECCCceEEEEEeC-CC
Confidence 378999999998 88999999999999999754 5799999997654 24677665 66889999999999998 78
Q ss_pred eeeeEEecChhhhhhcCceeeEEEec
Q 007735 121 VGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 121 ~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
+|+||||||...+...||.|.++|.+
T Consensus 123 pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 123 PGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp CEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CeeEEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999999875
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.60 E-value=7.9e-16 Score=138.62 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=76.9
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCcc--ceEEeCCCcEEEEEEEeCCc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIAR--TTTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~r--DTv~Vpp~g~~~irf~adNp 507 (591)
+.++++.|++|.|+..| .+..|+||+||.+|.+|..+ |.+. +++.+ +|+.|+|++.+++.|++++|
T Consensus 66 ~~l~akvGErV~i~~~~-~n~~s~fHliG~hFD~V~~~-G~~~----------~~p~~~~qTv~VppG~a~~ve~~f~~P 133 (173)
T d2bw4a2 66 HALTAAVGERVLVVHSQ-ANRDTRPHLIGGHGDYVWAT-GKFR----------NPPDLDQETWLIPGGTAGAAFYTFRQP 133 (173)
T ss_dssp GCEEEETTCEEEEEEEE-SSSCBCEEEETCCEEEEETT-CCTT----------SCCEEEESCCCBCTTEEEEEEEECCSC
T ss_pred cCcccccCCeEEEEecC-CCCCccceeccceeEEECCC-Cccc----------CCCcCCceeEEccCCccEEEEEEecCc
Confidence 44677889999765544 46789999999999999874 3321 34444 49999999999999999999
Q ss_pred cceeeeccc-ccchhccceEEEEEecCCCC
Q 007735 508 GIWNLRTEN-LDSWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 508 G~W~~HCHi-l~H~~~GM~~~~~V~~p~~~ 536 (591)
|.|+||||. .+|++.|||..++|..++.+
T Consensus 134 G~y~~v~H~l~ea~~~G~~g~l~V~G~~~p 163 (173)
T d2bw4a2 134 GVYAYVNHNLIEAFELGAAGHFKVTGEWND 163 (173)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred eEEEEEechHHHHHhCCCEEEEEEcCCCCc
Confidence 999999996 57899999999999866543
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.58 E-value=7.2e-17 Score=138.26 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=65.1
Q ss_pred eEEEEECCCCCC--CcEEeeCCCEEEEEEEECC--CCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCce
Q 007735 46 QQVIAINGKFPG--PTINVTTNNNVVVNVRNKL--DESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 46 ~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l--~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
..+|+|||+.+| |.|++++||+|+++|.|.. +..+++||||.... .+|.....++|.||++.+|+|++ +.+
T Consensus 21 ~~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~----~~~~~~dtv~i~pg~~~~v~~~a-~~p 95 (116)
T d1sdda2 21 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SPE 95 (116)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC---------
T ss_pred CcEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEeccccc----cCCcccceEeecccEEEEEEEEc-CCC
Confidence 357999999998 6799999999999999954 56789999998653 23333345889999999999998 689
Q ss_pred eeeEEecChhhhhhcCceeeE
Q 007735 122 GSFFYFPSLHFQRASGGFGGF 142 (591)
Q Consensus 122 Gt~wYH~H~~~q~~~Gl~G~l 142 (591)
|+||||||...+...||+|.|
T Consensus 96 G~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 96 GRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC
T ss_pred eEEEEEcCCHHHHHccceecC
Confidence 999999999999999999864
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.55 E-value=5.2e-15 Score=128.99 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=80.5
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCce
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
++....+++.+++|++|+|+|++||+|+++|+|.......+|+|++...+ .+..+.||++.+|.|++ +++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~---------~~~~~~PG~~~~~~F~a-~~~ 105 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG---------VAMEIGPQMTSSVTFVA-ANP 105 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEEC-CSC
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhc---------cccccCCCEEEEEEEeC-CCC
Confidence 45667889999999999999999999999999998778889999985432 13568999999999998 699
Q ss_pred eeeEEecChh-hhhhcCceeeEEEecC
Q 007735 122 GSFFYFPSLH-FQRASGGFGGFIINNR 147 (591)
Q Consensus 122 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 147 (591)
||||||||.- ...-.||.|.|||+|+
T Consensus 106 G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 106 GVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eEEEEECccccCcchhcCEEEEEEEcC
Confidence 9999999952 2222599999999974
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.51 E-value=3.6e-14 Score=120.33 Aligned_cols=97 Identities=22% Similarity=0.116 Sum_probs=77.3
Q ss_pred EEEecCCCee-eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEE
Q 007735 36 YITASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQ 114 (591)
Q Consensus 36 ~~~~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~ 114 (591)
...++.+|.. +.++..|+.+++++|++++||+|+++++|.....+++++|+... +..+.||++.+|+
T Consensus 15 ~~~~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~------------~~~~~pG~t~~~~ 82 (112)
T d1ibya_ 15 IPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGV------------QEVIKAGETKTIS 82 (112)
T ss_dssp EEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEE
T ss_pred cceeccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCCCceeeeeccccc------------ccccCCcceEEEE
Confidence 3455678876 56677788777679999999999999999976677777776421 2568999999999
Q ss_pred EEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 115 FQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 115 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
|++ +++|+||||||.... ..||.|.|+|.+
T Consensus 83 f~~-~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 83 FTA-DKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EEC-CSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred EEe-ccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 998 799999999997433 467999999964
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.49 E-value=2.5e-14 Score=128.43 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=77.9
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccc--eEEeCCCcEEEEEEEeCCcc
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIART--TTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rD--Tv~Vpp~g~~~irf~adNpG 508 (591)
.++++.|++|.|+. +..+..++||+||.+|..|-.+ |.+ .++..|| |+.|+|++.+++.|++++||
T Consensus 67 ~l~akvGe~Vri~~-~~~N~~ssfHlIG~hfD~V~~~-G~~----------~n~p~~~~qT~~V~pG~~~~v~~tf~~PG 134 (177)
T d1oe1a2 67 ALTAKVGETVLLIH-SQANRDTRPHLIGGHGDWVWET-GKF----------ANPPQRDLETWFIRGGSAGAALYTFKQPG 134 (177)
T ss_dssp CEEEETTCEEEEEE-EESSSCBCEEETTCCEEEEETT-CCT----------TSCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred CcccccCCeEEEEe-cCCCCCccceecccccceEccC-Cee----------CCCCCcCceeEEecCCccEEEEEEecCce
Confidence 45677899998854 5557899999999999998754 332 2456676 99999999999999999999
Q ss_pred ceeeecccc-cchhccceEEEEEecCCCC
Q 007735 509 IWNLRTENL-DSWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 509 ~W~~HCHil-~H~~~GM~~~~~V~~p~~~ 536 (591)
.|+||||.+ +|++.|||..++|..++++
T Consensus 135 ~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~p 163 (177)
T d1oe1a2 135 VYAYLNHNLIEAFELGAAGHIKVEGKWND 163 (177)
T ss_dssp EEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEEEEecHHHHHHhcCCeEEEEecCCCCc
Confidence 999999975 6899999999999866543
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.39 E-value=8.9e-14 Score=104.78 Aligned_cols=46 Identities=22% Similarity=0.501 Sum_probs=40.9
Q ss_pred ccCCCCcEEEEEEeCCcee---------eeEEecChh--hhhhcCceeeEEEecCCC
Q 007735 104 PIPPKWNWTYQFQVKDQVG---------SFFYFPSLH--FQRASGGFGGFIINNRAI 149 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 149 (591)
+|.||++|+|+|++++..| |||||||.. .|+.+||+|+|||+++..
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 5899999999999986665 999999975 599999999999998764
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.37 E-value=1e-13 Score=124.53 Aligned_cols=92 Identities=10% Similarity=-0.017 Sum_probs=73.0
Q ss_pred EEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEE-eCCc
Q 007735 430 SVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS-LDNV 507 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~-adNp 507 (591)
+.+.++.|++|+|.|.|.+. +.||||||++.+.+...+. .....+..+++..+.||+...++|. +++|
T Consensus 60 Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~----------~~~~~~~~~~~~~v~pg~~~~~~f~~~~~p 129 (153)
T d1e30a_ 60 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPV----------IDPIVAGTGFSPVPKDGKFGYTNFTWHPTA 129 (153)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCC----------CCSEEEEBCCCCCCBTTEEEEEEEEECCCS
T ss_pred CeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCcccccc----------ccccCCCccceeeecCCCEEEEEEEeCCCC
Confidence 34678899999999999764 6899999988654433211 1112245678888899999999997 6899
Q ss_pred cceeeecccccchhccceEEEEEe
Q 007735 508 GIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 508 G~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|.||||+..|...||...+.|+
T Consensus 130 Gty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 130 GTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEEeCCchhHHHCCCEEEEEEC
Confidence 999999999999999999999884
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.18 E-value=8.4e-12 Score=108.21 Aligned_cols=90 Identities=20% Similarity=0.158 Sum_probs=67.6
Q ss_pred EeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 432 INGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
+.++.|++|+|.+.|.. ...+.+|.||..+. . ..+... ...-+...|.||+....+|.+++||.|
T Consensus 36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~--~---~~~~~~---------~~~~~~~~I~PG~s~~y~f~a~~~Gt~ 101 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQR--G---TPWADG---------TASISQCAINPGETFFYNFTVDNPGTF 101 (129)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCT--T---CGGGSC---------CBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEeCCCCCCeeeeeccceee--c---cCcccc---------ccccccceECCCCEEEEEEECCCCCce
Confidence 45678999999999964 45677888887531 1 111100 111233457899999999999999999
Q ss_pred eeecccccchhccceEEEEEecCCC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
.||||...|...||...+.|.+|+.
T Consensus 102 ~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 102 FYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EEEECSTTTGGGTCEEEEEEECCTT
T ss_pred EEecCCHHHHhCCCEEEEEEcCCCC
Confidence 9999999999999999999987764
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.15 E-value=7e-11 Score=105.25 Aligned_cols=83 Identities=14% Similarity=0.107 Sum_probs=63.5
Q ss_pred EEeccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 431 VINGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
.+.++.|++|+|.+.|.. ...|.+|+||... .. + ......|.||+...++|++++||
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~----~~-~----------------~~~~~~i~PG~t~ty~f~a~~~G 121 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPENTMPHNIDFHAATG----AL-G----------------GGGLTLINPGEKVVLRFKATRAG 121 (153)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GG-G----------------GGGGCCBCTTEEEEEEEECCSCE
T ss_pred cEEEeCCCEEEEEEEcCCCCceEccCccccCCc----CC-C----------------CCccccccCCCEEEEEEEcCCCc
Confidence 356788999999999953 4578899998641 00 0 01112478999999999999999
Q ss_pred ceeeeccc-----ccchhccceEEEEEecCC
Q 007735 509 IWNLRTEN-----LDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 509 ~W~~HCHi-----l~H~~~GM~~~~~V~~p~ 534 (591)
.|.||||. ..|...||...+.|..+|
T Consensus 122 t~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 122 AFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp EEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred eEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 99999995 347789999999986554
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.12 E-value=8.5e-11 Score=101.55 Aligned_cols=95 Identities=13% Similarity=0.175 Sum_probs=76.1
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCce
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
++....++....+|..+.|+|++||+|.++++|.....-.+|..++...+ -+..+.||++.++.|++ +++
T Consensus 35 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~---------v~~~~~PG~t~~~~f~~-~~~ 104 (131)
T d1qnia1 35 NKVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHG---------VSMEISPQQTASVTFTA-GKP 104 (131)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEEC-CSS
T ss_pred CceeEEEEEeccCCccceEEecCCCEEEEEEEccCCCCcceEEEEEeccC---------cccccCCCceEEEEEEc-CCC
Confidence 34567789999999999999999999999999987766667777663321 12458899999999998 799
Q ss_pred eeeEEecChh-hhhhcCceeeEEEec
Q 007735 122 GSFFYFPSLH-FQRASGGFGGFIINN 146 (591)
Q Consensus 122 Gt~wYH~H~~-~q~~~Gl~G~liV~~ 146 (591)
|+|||||+.- ...-.+|.|.|+|++
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999952 222258999999987
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.02 E-value=5.8e-10 Score=99.80 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=80.8
Q ss_pred EEEEECCCCCCCc----EEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-------CCCccCCCCcEEEEE
Q 007735 47 QVIAINGKFPGPT----INVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-------TNCPIPPKWNWTYQF 115 (591)
Q Consensus 47 ~~~~~Ng~~pgP~----i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-------tq~~I~PG~~~~Y~f 115 (591)
..+.|||+..+++ |+++.||+|+|. .+.....+++|.||.+... .|.+|... ....|+||+....+|
T Consensus 51 t~vvFNG~v~altg~~~l~akvGErV~i~-~~~~n~~s~fHliG~hFD~-V~~~G~~~~~p~~~~qTv~VppG~a~~ve~ 128 (173)
T d2bw4a2 51 THIVFNGAVGALTGDHALTAAVGERVLVV-HSQANRDTRPHLIGGHGDY-VWATGKFRNPPDLDQETWLIPGGTAGAAFY 128 (173)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEE-EEESSSCBCEEEETCCEEE-EETTCCTTSCCEEEESCCCBCTTEEEEEEE
T ss_pred CEEEECCCccccccccCcccccCCeEEEE-ecCCCCCccceeccceeEE-ECCCCcccCCCcCCceeEEccCCccEEEEE
Confidence 4589999998887 999999999884 4445778999999987642 36677432 136699999999999
Q ss_pred EeCCceeeeEEecCh-hhhhhcCceeeEEEecCCC
Q 007735 116 QVKDQVGSFFYFPSL-HFQRASGGFGGFIINNRAI 149 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H~-~~q~~~Gl~G~liV~~~~~ 149 (591)
+. +++|+|-||||. ......||.|.|.|+++.+
T Consensus 129 ~f-~~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 129 TF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp EC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred Ee-cCceEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 98 589999999996 4566789999999998654
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.00 E-value=1.3e-10 Score=104.57 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=69.1
Q ss_pred EeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 432 INGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
+.++.|+.|+|.+.|.. ...+.+|.||..+.......| .+.......+++|++...+|.++++|.|
T Consensus 69 I~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g-------------~~~~~~~~i~~pg~~~~y~f~~~~~Gt~ 135 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDG-------------ANGVTECPIPPKGGQRTYRWRARQYGTS 135 (162)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC-------------CBTTTBCCBCTTTEEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEecCcccccccccccccccCCCcCCC-------------CcccccceecCCCCEEEeeecCCCCEEE
Confidence 45678999999999964 467899999987522111111 0112233346789999999999999999
Q ss_pred eeecccccchhccceEEEEEecCC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.||||+..|...||...+.|.+|+
T Consensus 136 wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 136 WYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEECSTTGGGGTCEEEEEEECCC
T ss_pred EeecCCHHHHhCCCEEEEEECCCC
Confidence 999999999999999999998775
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.97 E-value=2.4e-10 Score=102.11 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=61.6
Q ss_pred EEeccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 431 VINGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
.+.++.|++|+|.|.|... ..|.+|+||... +.+. ...-.|.||+...++|++++||
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a~~pG 123 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTNTLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKATKPG 123 (157)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEEeCCCCcceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence 3567889999999999643 356677776431 1000 1111378999999999999999
Q ss_pred ceeeecc----cccchhccceEEEEEecCC
Q 007735 509 IWNLRTE----NLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 509 ~W~~HCH----il~H~~~GM~~~~~V~~p~ 534 (591)
.|.|||| +..|...||...+.|...+
T Consensus 124 t~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 124 VFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred cceEEECCCCchHHHHhCCCEEEEEEeCCC
Confidence 9999999 4568899999999886544
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=98.93 E-value=3.5e-10 Score=100.55 Aligned_cols=81 Identities=19% Similarity=0.076 Sum_probs=59.2
Q ss_pred EeccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 432 INGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.++.|++|+|.+.|... ..|.+|+|+... +.+ ....+ .|.||+....+|++++||.
T Consensus 60 i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~~-----~~~--------------~~~~~--~i~PG~t~~y~f~a~~~Gt 118 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGG--------------GAAAT--FTAPGRTSTFSFKALQPGL 118 (151)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG--------------GTTTT--CBCTTEEEEEEEECCSCEE
T ss_pred EEEECCCEEEEEEEcCCCCceeeecccccccc-----CCC--------------Cccee--eeCCCCEEEEEEeCCCCeE
Confidence 567789999999999543 345566665431 111 01122 2679999999999999999
Q ss_pred eeeeccc---ccchhccceEEEEEecC
Q 007735 510 WNLRTEN---LDSWYLGQETYVRVVNP 533 (591)
Q Consensus 510 W~~HCHi---l~H~~~GM~~~~~V~~p 533 (591)
|+||||. ..|...||+..+.|.+.
T Consensus 119 ~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 119 YIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp EEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred EEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999995 35889999999998644
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.92 E-value=8.5e-10 Score=96.72 Aligned_cols=99 Identities=6% Similarity=-0.149 Sum_probs=68.7
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEE----E---cCCCCCCCCCCCCC-CCCCCccceEEeCCCcEEEEE
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVG----M---DYGEWTDNSRGTYN-KWDGIARTTTQVYPGAWTAIL 501 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~----~---g~g~~~~~~~~~~n-~~~p~~rDTv~Vpp~g~~~ir 501 (591)
..++++.|++|+|+|.|.+...|+++++...+.... . ..+... ...+. -.+.+..+|..+.|++...|+
T Consensus 32 ~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~v~~~t~~~~pg~s~~i~ 108 (139)
T d1qhqa_ 32 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADA---LFVPPPDTPNALAWTAMLNAGESGSVT 108 (139)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGG---TTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred CeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchh---ccccCCCcccccccccccCCcceEEEE
Confidence 346788999999999999877655544322210000 0 000000 00011 112356788899999999999
Q ss_pred EEeCCccceeeecccccchhccceEEEEEe
Q 007735 502 VSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 502 f~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|+++.||.|.||||+..|+..||...+.|.
T Consensus 109 f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 109 FRTPAPGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp EECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EecCCCeEEEEEcCCcCcccccCeEEEEEc
Confidence 999999999999999999999999999985
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.91 E-value=3.8e-10 Score=100.97 Aligned_cols=82 Identities=17% Similarity=0.175 Sum_probs=62.7
Q ss_pred EeccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 432 INGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.++.|++|+|.|.|... ..|.+|+||..+.+ + | . .+ . .|.||+...++|++++||.
T Consensus 67 I~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~---~-g----~---~~--------~--~I~PG~t~ty~f~a~~~Gt 125 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL---G-G----A---KL--------T--NVNPGEQATLRFKADRSGT 125 (159)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---G-G----G---GG--------C--CBCTTEEEEEEEECCSCEE
T ss_pred EEEECCcEEEEEEECCCccccccceeeccccCCC---C-C----c---cc--------c--cCCCCCeEEEEEEcCCCce
Confidence 567789999999999754 46788999865211 0 0 0 01 0 3789999999999999999
Q ss_pred eeeeccc----ccchhccceEEEEEecCC
Q 007735 510 WNLRTEN----LDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 510 W~~HCHi----l~H~~~GM~~~~~V~~p~ 534 (591)
|.||||. ..|...||...+.|...+
T Consensus 126 ~~yH~H~~~~~~~q~~~Gl~G~liV~p~e 154 (159)
T d1oe2a1 126 FVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (159)
T ss_dssp EEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred EEEEeCCCCCchhHHhCCCEEEEEEECCC
Confidence 9999994 568899999999886444
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=1.1e-09 Score=99.64 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=73.2
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee---eeeeeEEEE
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV---QQNYTSLDI 266 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~i 266 (591)
+.++|||+.+ ..+.|.++++.|+++||||+|.+....|+||||||.|+|++.+|.... +...|++.|
T Consensus 71 ~~~tING~~f----------~~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v 140 (181)
T d1kv7a3 71 HANKINGQAF----------DMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKV 140 (181)
T ss_dssp GCEEETTBCC----------CTTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEE
T ss_pred cceeECCEec----------CCCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEe
Confidence 5789999987 234578999999999999999987668999999999999999998764 456799999
Q ss_pred ccccEEEEEEEeC--CC-CCcceEEEEeec
Q 007735 267 HVGQSYSFLVTMD--QN-ASTDYYIVASAR 293 (591)
Q Consensus 267 ~pGqR~dvlv~~~--~~-~g~~y~i~~~~~ 293 (591)
.+++ ..++|++. .+ +| .|.++++..
T Consensus 141 ~~~~-~~v~v~f~~~~~~~G-~w~fHCHil 168 (181)
T d1kv7a3 141 EGNV-SEVLVKFNHDAPKEH-AYMAHCHLL 168 (181)
T ss_dssp SSSE-EEEEECCCSCCCGGG-CEEEEESSH
T ss_pred CCCc-eEEEEEEEeeCCCCC-eEEEeCChH
Confidence 7764 34555543 32 35 888888764
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.90 E-value=2.7e-09 Score=89.62 Aligned_cols=74 Identities=11% Similarity=0.193 Sum_probs=62.2
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|+|.|.+...|+||+|++.. +..+.||+...++|.++.||.|
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~---------------------------~~~~~pG~t~~~~f~~~~~G~y 91 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGV---------------------------QEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEeCCCCceeeeeccccc---------------------------ccccCCcceEEEEEEeccceEE
Confidence 4678899999999999988899999998743 2356789999999999999999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
.||||+..|+ .||...+.|.+
T Consensus 92 ~y~C~~~~~~-~~M~G~i~V~e 112 (112)
T d1ibya_ 92 TIWCQLHPKN-IHLPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTT-TBCCEEEEEEC
T ss_pred EEECcccChh-hcCeEEEEEEC
Confidence 9999995443 67999998863
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.82 E-value=5.2e-09 Score=91.54 Aligned_cols=92 Identities=11% Similarity=0.082 Sum_probs=65.5
Q ss_pred CCCCCcEEeeCCCEEEEEEEECC--CCCceeeecCcc----------------C--CCCCCCCCCCCCCCccCCCCcEEE
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKL--DESLLIHWSGIQ----------------Q--RRSSWQDGLLGTNCPIPPKWNWTY 113 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l--~~~~siH~HG~~----------------~--~~~~~~DGv~~tq~~I~PG~~~~Y 113 (591)
+|--.+|+|++||+|++.++|.- +.+++++..... . ...+.++.+......+.||++.++
T Consensus 28 ~F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i 107 (139)
T d1qhqa_ 28 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 107 (139)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEE
Confidence 35456999999999999999974 345554433211 0 001111111112245899999999
Q ss_pred EEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 114 QFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 114 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.|+++ ++|+||||||.-.++..||.|.|+|.|
T Consensus 108 ~f~~~-~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 108 TFRTP-APGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEECC-SSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEecC-CCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 99995 799999999998899999999999975
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.77 E-value=6.4e-09 Score=89.49 Aligned_cols=90 Identities=13% Similarity=0.162 Sum_probs=66.7
Q ss_pred EEeccCCcEEEEEEecCCC-----cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEE-e
Q 007735 431 VINGTYRGFMEVILQNNDT-----KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS-L 504 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~-----~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~-a 504 (591)
++.++.|+.|+|.|.|..+ ..|.+|+||-.+ ....+.+. ...-....|+||+....+|. +
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~-----~~~~~~dg---------v~g~~~~~I~PG~~~~y~~~~~ 100 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQ-----RGTNWADG---------ADGVNQCPISPGHAFLYKFTPA 100 (131)
T ss_dssp EEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCC-----TTCGGGSC---------CBTTTBCCBCTTCEEEEEECCT
T ss_pred eEEEECCCEEEEEEEECCCCccccccceEEeCCccc-----CCCCCCCC---------CcccccceECCCCeEEEEEeCC
Confidence 4567889999999999653 368999999643 11111111 00111235789999999998 6
Q ss_pred CCccceeeecccccchhccceEEEEEecCC
Q 007735 505 DNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 505 dNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
+.+|.|.||||...|...||...+.|.+++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 101 GHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 889999999999999999999999998765
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.76 E-value=8.4e-09 Score=88.72 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=66.1
Q ss_pred EeccCCcEEEEEEecCCC-----cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-C
Q 007735 432 INGTYRGFMEVILQNNDT-----KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-D 505 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~-----~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-d 505 (591)
+.++.|+.|++.|.|... ..|.+|+||... ....+.. .+..-....|.||++...+|++ +
T Consensus 36 I~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~-----~~~~~~d---------~~~~~s~~~i~PG~s~~Y~~~~~~ 101 (130)
T d1gyca1 36 ITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQ-----AGTNWAD---------GPAFVNQCPIASGHSFLYDFHVPD 101 (130)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCC-----TTCGGGS---------CCBTTTBCCBCTTEEEEEEEECSS
T ss_pred EEEECCeEEEEEEEecCCCcccCCceeEEeccccc-----cccCCCC---------CccccccCCCCCCCeEEEEEECCC
Confidence 567789999999999753 467899999753 0001100 0111112248899999999997 5
Q ss_pred CccceeeecccccchhccceEEEEEecCC
Q 007735 506 NVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 506 NpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.+|.|.||||...|...||...+.|.+|+
T Consensus 102 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 79999999999999999999999998874
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.74 E-value=2.8e-09 Score=98.21 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=72.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC----
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD---- 505 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad---- 505 (591)
+++.++.|++|.|+|.|.....|++|.||..|.....+.. +.. ........+..|+||+....+|.+.
T Consensus 76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~-~~d-------g~~~~~~~~~~v~PG~t~tY~~~~~~~~~ 147 (192)
T d2j5wa1 76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAI-YPD-------NTTDFQRADDKVYPGEQYTYMLLATEEQS 147 (192)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCC-SCC-------CCCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccc-cCC-------CCCCCCcccCcccCCCEEEEEEEccCccc
Confidence 4578899999999999998899999999998743222111 100 0112234445689999999999875
Q ss_pred ------Cccceeeeccccc--chhccceEEEEEecCCC
Q 007735 506 ------NVGIWNLRTENLD--SWYLGQETYVRVVNPEA 535 (591)
Q Consensus 506 ------NpG~W~~HCHil~--H~~~GM~~~~~V~~p~~ 535 (591)
++|.|+||||+.. |...||+..+.|..+..
T Consensus 148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 3679999999844 77889999999987654
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.72 E-value=4.8e-08 Score=87.04 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=104.0
Q ss_pred CCCCcceEEecccccCchH--H----------HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCE
Q 007735 156 TPDGDITILIGDWYTRNHT--A----------LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKT 223 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~~--~----------~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~ 223 (591)
.+|+++.+.-+|+|...+. + ..+.++. .....|+.+.+||+..-. .....++++.||+
T Consensus 6 ~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~P~~vvFNG~~gal---------t~~~~l~akvGe~ 75 (177)
T d1oe1a2 6 HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGAL---------TGANALTAKVGET 75 (177)
T ss_dssp CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCE
T ss_pred ccceEEEecccEeecCCCCCCCccccCChhhcchhHHHH-HhccCCcEEEECCccccc---------cCCCCcccccCCe
Confidence 4599999999999973221 1 1111110 012368999999997521 1124699999998
Q ss_pred EEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee--eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCC
Q 007735 224 YRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ--QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK 301 (591)
Q Consensus 224 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p--~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~ 301 (591)
+| |++++.....+||+.|+.|..+..+|.+..+ ...+++.|.+|++..+.++++ .+| .|.++++.-....
T Consensus 76 Vr--i~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~-~PG-~Y~fV~H~L~ea~---- 147 (177)
T d1oe1a2 76 VL--LIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFK-QPG-VYAYLNHNLIEAF---- 147 (177)
T ss_dssp EE--EEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCE-EEEEEESSHHHHH----
T ss_pred EE--EEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEec-Cce-EEEEEecHHHHHH----
Confidence 85 5788888899999999999999999998764 346799999999999999998 568 9999998643210
Q ss_pred CcceEEEEEecCCC
Q 007735 302 RVTGVAILHYTNSK 315 (591)
Q Consensus 302 ~~~~~ail~y~~~~ 315 (591)
.....|+|.+.+..
T Consensus 148 ~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 148 ELGAAGHIKVEGKW 161 (177)
T ss_dssp TTSCEEEEEEESCC
T ss_pred hcCCeEEEEecCCC
Confidence 13467889888654
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=1.6e-08 Score=88.12 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=67.0
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCc-c
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNV-G 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNp-G 508 (591)
+++.++.|+.|++.+.|.....|++|+||.+. -...+| . + .+ .++||+....+|.+++| |
T Consensus 46 P~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG-----~--------~--~~--~i~pg~~~~y~~~~~~~aG 106 (140)
T d1kv7a1 46 PAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDG-----G--------P--QG--IIPPGGKRSVTLNVDQPAA 106 (140)
T ss_dssp CEEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSC-----C--------T--TC--CBCTTCEEEEEEECCSCSE
T ss_pred ceEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCC-----C--------c--cc--eEccCCceeEEEEEecCCe
Confidence 34677889999999999999999999999753 010011 0 1 11 27899999999999886 9
Q ss_pred ceeeecccc----cchhccceEEEEEecCCC
Q 007735 509 IWNLRTENL----DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 509 ~W~~HCHil----~H~~~GM~~~~~V~~p~~ 535 (591)
.+.||||.. .|...||...+.|.++|+
T Consensus 107 t~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 107 TCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp EEEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred eEEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 999999963 467799999999987753
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.62 E-value=4.9e-08 Score=86.53 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=73.3
Q ss_pred eEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCc---------------
Q 007735 191 GVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY--------------- 255 (591)
Q Consensus 191 ~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~--------------- 255 (591)
.++|||+.+. +....+++.|++.+|+|+|.+.. .|+|||||+.|+||+.++..
T Consensus 29 ~~~ing~~~~-----------~~~~~~~~~G~~e~W~i~N~~~~-~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~ 96 (154)
T d1gska3 29 VLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGP 96 (154)
T ss_dssp EEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSC
T ss_pred eEEECCcCcC-----------CCcccccCCCCEEEEEEEeCCCC-CCCEEECCceEEEEEecCCCcccccccccccccCC
Confidence 6899999872 23456789999999999998876 79999999999999876521
Q ss_pred ------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 256 ------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 256 ------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
.++...|++.|.||+.+.|.+++...+| .|.++++..
T Consensus 97 ~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG-~w~~HCHil 139 (154)
T d1gska3 97 AVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHIL 139 (154)
T ss_dssp CBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCH
T ss_pred CcCCCcccCcccccEEeCCCCEEEEEEEeCCCCc-ceEEecCcc
Confidence 1123579999999999999999766778 888888764
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.49 E-value=1.7e-07 Score=80.47 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=60.1
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|.|.|.+...|.+|-|+ |-+ .+-...+.||....++|++++||.|
T Consensus 53 ~i~V~~Gd~V~~~ltN~d~~~~v~H~~~----i~~--------------------~~~~~~~~PG~~~~~~F~a~~~G~y 108 (132)
T d1fwxa1 53 SFTVKEGDEVTVIVTNLDEIDDLTHGFT----MGN--------------------YGVAMEIGPQMTSSVTFVAANPGVY 108 (132)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEE----ETT--------------------TTEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcCCCEEEEEEEcCCCCccceEeec----hhh--------------------hccccccCCCEEEEEEEeCCCCeEE
Confidence 4578899999999999887766655432 211 1223467899999999999999999
Q ss_pred eeecccccch-hccceEEEEEe
Q 007735 511 NLRTENLDSW-YLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~-~~GM~~~~~V~ 531 (591)
.||||..-|. |.||...+.|+
T Consensus 109 ~~~C~~~cg~~H~~M~G~iiVe 130 (132)
T d1fwxa1 109 WYYCQWFCHALHMEMRGRMLVE 130 (132)
T ss_dssp EEECCSCCSTTCTTCEEEEEEE
T ss_pred EEECccccCcchhcCEEEEEEE
Confidence 9999987666 78999999885
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.48 E-value=1.9e-07 Score=85.76 Aligned_cols=87 Identities=17% Similarity=0.193 Sum_probs=66.3
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-C-CC-------CccCCCC-cEEEEEEeCCceeeeEE
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-G-TN-------CPIPPKW-NWTYQFQVKDQVGSFFY 126 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-~-tq-------~~I~PG~-~~~Y~f~~~~~~Gt~wY 126 (591)
+..+.+..++.++|++.|. ..+.+|.||.++.... .+|.. . .. ..|+||+ ...++|.+ +.+|.|.|
T Consensus 71 ~~~~~~~~~~~~~i~~~~~--~~HP~HlHG~~F~Vl~-~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~ 146 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVR-TPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFL 146 (190)
T ss_dssp TTEEEECTTCEEEEEEECC--BSCEEEESSCCEEEEE-CTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEE
T ss_pred ceeEEccCccEEEEEeccC--ccccccccCceEEEEE-cCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEE
Confidence 3468999999999999886 5788999998764322 22222 1 11 2377764 66799998 78999999
Q ss_pred ecChhhhhhcCceeeEEEecC
Q 007735 127 FPSLHFQRASGGFGGFIINNR 147 (591)
Q Consensus 127 H~H~~~q~~~Gl~G~liV~~~ 147 (591)
|||...+...||...|++.++
T Consensus 147 HCHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 147 HCHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp EESCHHHHTTTCEEEEEESGG
T ss_pred ecCchhhhhCCCcEEEEECCC
Confidence 999999999999999988653
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.47 E-value=2e-07 Score=80.46 Aligned_cols=91 Identities=12% Similarity=0.121 Sum_probs=66.2
Q ss_pred EeccCCcEEEEEEecCCC-----cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-C
Q 007735 432 INGTYRGFMEVILQNNDT-----KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-D 505 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~-----~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-d 505 (591)
+.++.|+.++|.+.|..+ ..+.+|.||-.. ....+.. ....-....|+||+....+|.+ +
T Consensus 36 i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~-----~~~~~~d---------gv~~~t~~~I~PG~~~~Y~~~~~~ 101 (136)
T d1v10a1 36 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQ-----AGTTEMD---------GPAFVNQCPIIPNESFVYDFVVPG 101 (136)
T ss_dssp EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCC-----TTCGGGS---------CCBTTTBCCBCTTEEEEEEEECTT
T ss_pred EEEECCcEEEEEEEeCCCCcccCcceeEEeccccc-----ccccccC---------CCCccccceECCCCeEEEEEECCC
Confidence 566789999999999643 467899999542 0000100 0111112347899999999997 5
Q ss_pred CccceeeecccccchhccceEEEEEecCCCC
Q 007735 506 NVGIWNLRTENLDSWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 506 NpG~W~~HCHil~H~~~GM~~~~~V~~p~~~ 536 (591)
.+|.|.||||...|...||...+.|.+|++.
T Consensus 102 ~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp 132 (136)
T d1v10a1 102 QAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP 132 (136)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred CccceEEecCchhHHhCCCEEEEEECCCccc
Confidence 6999999999999999999999999887653
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.46 E-value=3.7e-07 Score=84.29 Aligned_cols=89 Identities=17% Similarity=0.142 Sum_probs=68.0
Q ss_pred CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC--CC-------Ccc-CCCCcEEEEEEeCCceeeeE
Q 007735 57 GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG--TN-------CPI-PPKWNWTYQFQVKDQVGSFF 125 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~--tq-------~~I-~PG~~~~Y~f~~~~~~Gt~w 125 (591)
+.+|+++.|+.+++.+.|... ..+.+|+||.++.... .+|... .. ..| .+|+....+|.+ +.+|.|.
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~-~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~a-dnpG~w~ 146 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPWF 146 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEEC-CSCEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEEe-ccCCCCCccccCcccceEEeCCCCEEEEEEEEC-CCCeeeE
Confidence 457999999999999998865 6899999998653221 222211 11 235 467788899998 7899999
Q ss_pred EecChhhhhhcCceeeEEEecC
Q 007735 126 YFPSLHFQRASGGFGGFIINNR 147 (591)
Q Consensus 126 YH~H~~~q~~~Gl~G~liV~~~ 147 (591)
||||...+...||...|++.+.
T Consensus 147 ~HCHi~~H~~~GM~~~~~~~~~ 168 (200)
T d1hfua3 147 FHCHIEFHLMNGLAIVFAEDMA 168 (200)
T ss_dssp EEESSHHHHHTTCEEEEEECHH
T ss_pred EEeCCChHHhCCCcEEEEEcCC
Confidence 9999999999999888877653
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.44 E-value=1.3e-06 Score=76.80 Aligned_cols=142 Identities=12% Similarity=0.024 Sum_probs=105.3
Q ss_pred CCCCcceEEecccccCchH------------HHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCE
Q 007735 156 TPDGDITILIGDWYTRNHT------------ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKT 223 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~~------------~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~ 223 (591)
.+|+++.++-+|+|...+. .....++ -.....|+.+.+||+..-. ...-.++++.||+
T Consensus 10 ~yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e-~m~~l~PthVVFNG~vgal---------tg~~aL~AkvGEt 79 (178)
T d1mzya2 10 RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVA-VMDTLIPSHIVFNGAVGAL---------TGEGALKAKVGDN 79 (178)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHH-HHTTTCCSEEEETTSTTTT---------SGGGCEEEETTCE
T ss_pred ccCeEEEEecceeecCCCCCCCccccCChhhcchhHHH-HHHccCCCEEEECCccCcc---------cCCCCcccccCCe
Confidence 4499999999999963211 0111111 1112358999999987521 1124699999998
Q ss_pred EEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee--eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCC
Q 007735 224 YRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ--QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWK 301 (591)
Q Consensus 224 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p--~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~ 301 (591)
| ||+|++..+.-+||+-|-.+.-+-.+|.+..+ ...+++.|.+|+..-+.+++++ +| .|.++.+.-...-
T Consensus 80 V--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~-PG-~Y~~VdH~l~~A~---- 151 (178)
T d1mzya2 80 V--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAV---- 151 (178)
T ss_dssp E--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----
T ss_pred E--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC-Ce-EEEEEccHHHHHH----
Confidence 7 67999999999999999999988899998764 4578999999999999999995 68 9999988743321
Q ss_pred CcceEEEEEecCCC
Q 007735 302 RVTGVAILHYTNSK 315 (591)
Q Consensus 302 ~~~~~ail~y~~~~ 315 (591)
.....|+|...+..
T Consensus 152 ~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 152 HKGATAHVLVEGEW 165 (178)
T ss_dssp TTCCEEEEEEESCC
T ss_pred hCCCeEEEEeCCCC
Confidence 13567899987654
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.43 E-value=1.4e-07 Score=88.05 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=68.7
Q ss_pred cEEeeCCCEEEEEEEECC------CCCceeeecCccCCCCCCCCCCC-------------C--CCCccCCCCcEEEEEEe
Q 007735 59 TINVTTNNNVVVNVRNKL------DESLLIHWSGIQQRRSSWQDGLL-------------G--TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 59 ~i~v~~Gd~v~v~v~N~l------~~~~siH~HG~~~~~~~~~DGv~-------------~--tq~~I~PG~~~~Y~f~~ 117 (591)
+++++.|+.|+|.+.|.- .+.+.+|.||.++......+|.. . --..++||+..+.+|++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 589999999999999953 45789999998652211111211 1 11348899999999999
Q ss_pred CCceeeeEEecChhhhhhcCceeeEEEecCC
Q 007735 118 KDQVGSFFYFPSLHFQRASGGFGGFIINNRA 148 (591)
Q Consensus 118 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 148 (591)
+.+|.|.||||...+...||...|++.+.+
T Consensus 160 -dnpG~w~~HCH~~~H~~~GM~~~~~v~~~~ 189 (214)
T d1aoza3 160 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 189 (214)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGGG
T ss_pred -CCCeeEEEEECcHHHHhCcCcEEEEEcccc
Confidence 789999999999999999999988887643
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.40 E-value=1.1e-07 Score=77.42 Aligned_cols=82 Identities=16% Similarity=0.231 Sum_probs=51.9
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
..+|++++||+| ++.|.-.....++.+.-........++....+....||.+ |+|+. +.+|+|||+|.. +...
T Consensus 17 P~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~tf-~~~G~y~y~C~~--H~~~ 89 (98)
T d2plta_ 17 PKTLTIKSGETV--NFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGET--YSVKL-TAAGEYGYYCEP--HQGA 89 (98)
T ss_dssp SSEEEECTTCEE--EEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCE--EEEEC-CSCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEE--EEEECCCCceeEEEecCCccccccCCcccccccccCCCce--EEEEe-cCCceEEEEeCc--CCCC
Confidence 469999999986 4667766666666665432211111111111223345555 55554 579999999974 7778
Q ss_pred CceeeEEEe
Q 007735 137 GGFGGFIIN 145 (591)
Q Consensus 137 Gl~G~liV~ 145 (591)
||.|.|+|+
T Consensus 90 GM~G~I~Ve 98 (98)
T d2plta_ 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999996
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.38 E-value=3.8e-07 Score=82.54 Aligned_cols=98 Identities=11% Similarity=0.077 Sum_probs=68.2
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC----
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD---- 505 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad---- 505 (591)
+++.++.|+.|.++|.|.....+.+|.||..+-....+ ..+.... .+.-.-...|+||++...+|.++
T Consensus 60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~-~~~~d~~-------~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEG-ASYSDHT-------LPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSC-CCSCCCC-------CHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCcEEeeEEEeCCCCCcccccccccccccccc-ccccccC-------CCCCccccccCCCCEEEEEEEeCCccc
Confidence 46788999999999999988899999999865211110 0000000 00001111489999999999985
Q ss_pred ------Cccceeeeccccc--chhccceEEEEEecCCC
Q 007735 506 ------NVGIWNLRTENLD--SWYLGQETYVRVVNPEA 535 (591)
Q Consensus 506 ------NpG~W~~HCHil~--H~~~GM~~~~~V~~p~~ 535 (591)
+.|.|.||||+.. |...||...+.|..+..
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~ 169 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGT 169 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTC
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCCC
Confidence 3489999999854 55779999999987754
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.33 E-value=9.1e-07 Score=81.55 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=67.4
Q ss_pred CCcEEeeCCCEEEEEEEECC---CCCceeeecCccCCCCCCCCCCCC-CCC----------ccCCCCcEEEEEEeCCcee
Q 007735 57 GPTINVTTNNNVVVNVRNKL---DESLLIHWSGIQQRRSSWQDGLLG-TNC----------PIPPKWNWTYQFQVKDQVG 122 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~~~~~DGv~~-tq~----------~I~PG~~~~Y~f~~~~~~G 122 (591)
+.++.+..++++++.+.|.- ...+.+|.||.++..-...+|... ... .++||+...++|.+ |.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 44578999999999998864 356899999987643222333322 111 24799999999998 7899
Q ss_pred eeEEecChhhhhhcCceeeEEEec
Q 007735 123 SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 123 t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.|.||||...+...||...|++..
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETH
T ss_pred eEEEEcCchhhHhccCcEEEEEcC
Confidence 999999999999999998776554
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.32 E-value=4.1e-08 Score=81.18 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=59.3
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC--C-CCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL--G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
|-...|++++||+|+ +.|.-..++..+........ ...++.. . ....+.||+++.+.|+.++.+|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~- 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPG-ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP- 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEECSSCCEEEEECGGGSGG-GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST-
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceeEeecCcccc-cccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC-
Confidence 445689999999865 56765555555544322110 0000000 0 234578999999999988889999999985
Q ss_pred hhhhcCceeeEEEec
Q 007735 132 FQRASGGFGGFIINN 146 (591)
Q Consensus 132 ~q~~~Gl~G~liV~~ 146 (591)
+...||.|.|+|+.
T Consensus 92 -H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 92 -HRGAGMVGKITVEG 105 (105)
T ss_dssp -TGGGTCEEEEEECC
T ss_pred -CCCCCCEEEEEEcC
Confidence 77789999999973
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.20 E-value=4.7e-07 Score=73.60 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=52.6
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC--C-CCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL--G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
|-.+.|++++||+|+. .|.-..++++........ .|... . ....+.||++|+|.|+ .+|+|+|+|..
T Consensus 16 F~P~~i~v~~GdtV~~--~n~~~~~H~~~~~~~~~~----~~~~~~~~~~~~~~~~g~t~~~tf~---~~G~y~Y~C~~- 85 (98)
T d1pcsa_ 16 FEPSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVP----ADTAAKLSHKGLLFAAGESFTSTFT---EPGTYTYYCEP- 85 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECCSSSC----HHHHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGG-
T ss_pred EeCCEEEECCCCEEEE--eECCCCccceEEeccccC----CCccccccccccccCCCcEEEEecc---CCceEEEEecc-
Confidence 4457999999998665 466445555544321100 01100 1 2234688998888774 68999999964
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
+...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 86 -HRGAGMVGKVVVE 98 (98)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -CCCCCCEEEEEEC
Confidence 7778999999985
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.19 E-value=1.5e-06 Score=70.64 Aligned_cols=82 Identities=7% Similarity=0.132 Sum_probs=50.2
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC--CCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
...|++++||+|+ +.|.-...+.+.+................ ......|+++|+|.|+ .+|+|||+|-. +.
T Consensus 16 P~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf~---~~G~y~y~C~~--H~ 88 (99)
T d1bypa_ 16 PSDLSIASGEKIT--FKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP--HA 88 (99)
T ss_dssp SSEEEECTTEEEE--EEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG--GT
T ss_pred CCEEEECCCCEEE--EEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEec---CCceEEEEECc--CC
Confidence 4689999999865 56775555444443321111000000001 2234566777666663 68999999975 77
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|.
T Consensus 89 ~~GM~G~I~V~ 99 (99)
T d1bypa_ 89 GAGMVGKVTVN 99 (99)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 78999999984
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.19 E-value=1.4e-06 Score=70.77 Aligned_cols=84 Identities=11% Similarity=0.147 Sum_probs=53.8
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCC-CCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHF 132 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 132 (591)
|-...|++++||+|+ ++|.-..++++.+....... ....++-.. ......||++|++.|+ ++|+|.|+|- .
T Consensus 14 F~P~~iti~~GdtV~--f~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF~---~~G~y~Y~C~--p 86 (99)
T d1plca_ 14 FVPSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS--P 86 (99)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG--G
T ss_pred EeCCEEEECCCCEEE--EEECCCCCccEEEccCcCCCccccccCcccccccccCCCceEEEecC---CCceEEEEeC--C
Confidence 335689999999865 56865555665544321110 000000001 2344679998887763 6999999994 5
Q ss_pred hhhcCceeeEEEe
Q 007735 133 QRASGGFGGFIIN 145 (591)
Q Consensus 133 q~~~Gl~G~liV~ 145 (591)
+...||.|.|+|.
T Consensus 87 H~~~GM~G~I~V~ 99 (99)
T d1plca_ 87 HQGAGMVGKVTVN 99 (99)
T ss_dssp GTTTTCEEEEEEC
T ss_pred CcCCCcEEEEEEC
Confidence 8889999999984
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.19 E-value=2.2e-07 Score=76.16 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=46.9
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCC--------CCCCCCccCCCCcEEEEEEeCCceeeeEE
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG--------LLGTNCPIPPKWNWTYQFQVKDQVGSFFY 126 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG--------v~~tq~~I~PG~~~~Y~f~~~~~~Gt~wY 126 (591)
|-.++|++++||+|+ ++|.-..++...+- ... ..++ .......+.++...+|.|+. +++|+|||
T Consensus 14 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f-~~~G~y~Y 85 (102)
T d1kdja_ 14 FYPDSITVSAGEAVE--FTLVGETGHNIVFD---IPA--GAPGTVASELKAASMDENDLLSEDEPSFKAKV-STPGTYTF 85 (102)
T ss_dssp EESSEEEECTTCCEE--EEECSSSCBCCEEC---CCT--TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC-CSCEEEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCceeEEEe---cCC--CCCcccccccccCcccccccccCCccEEEEee-CCCceEEE
Confidence 335799999999875 55664333322221 000 0000 00111223333344455554 47999999
Q ss_pred ecChhhhhhcCceeeEEEe
Q 007735 127 FPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 127 H~H~~~q~~~Gl~G~liV~ 145 (591)
+|.. +...||.|.|+|+
T Consensus 86 ~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 86 YCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp ECST--TGGGTCEEEEEEC
T ss_pred EecC--CcccCCeEEEEEC
Confidence 9985 7788999999995
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.12 E-value=2.1e-06 Score=79.21 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=67.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc-
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG- 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG- 508 (591)
+++.++.|++|+|+|.|.....+.+|.||..+.--. .|.+-.... .. ...+.....-.|.||+....+|.+...+
T Consensus 86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~--dg~~~~~~~-~~-~~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNN--EGTYYSPNY-NP-QSRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGG--CSBCCBCC---------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred ceEEEECCCEEEEEEEECCCCCccccccccccCccc--ccccccCCC-Cc-ccCCcCcccceecCCCEEEEEEEecCCCC
Confidence 457889999999999999888999999998762211 111100000 00 0001111112478999999999876543
Q ss_pred ---------ceeeecccccch--hccceEEEEEecCCC
Q 007735 509 ---------IWNLRTENLDSW--YLGQETYVRVVNPEA 535 (591)
Q Consensus 509 ---------~W~~HCHil~H~--~~GM~~~~~V~~p~~ 535 (591)
.|+||||+.... ..||...+.|..++.
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 799999985544 669999999987754
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=98.10 E-value=1.4e-06 Score=70.66 Aligned_cols=79 Identities=10% Similarity=0.033 Sum_probs=50.3
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC----C-CCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL----G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~----~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
|-..+|++++||+|+ +.|.-...+......-. ..++.. . ......|++++++.| +.+|+|||+|-
T Consensus 15 F~P~~i~i~~GdtV~--f~n~~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~G~y~y~C~ 84 (98)
T d1iuza_ 15 FVPSKISVAAGEAIE--FVNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEE--EEECCCCcccEEEeCCC-----cccccccccccccCcccCCCcEEEEec---CCCceEEEEeC
Confidence 445689999999876 45664444433332211 111111 1 223456777776655 36999999997
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
. +...||.|.|+|+
T Consensus 85 ~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred C--CccCCCeEEEEEC
Confidence 5 7788999999996
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.04 E-value=1.2e-05 Score=68.53 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=59.2
Q ss_pred EEeccCCcEEEEEEecCCC---cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCc
Q 007735 431 VINGTYRGFMEVILQNNDT---KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~---~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNp 507 (591)
.+.++.|+.|.+.+.|.+. ..|.|++.+..+ . ..+.||....+.|.+++|
T Consensus 52 ~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v------------------------~---~~~~PG~t~~~~f~~~~~ 104 (131)
T d1qnia1 52 DFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGV------------------------S---MEISPQQTASVTFTAGKP 104 (131)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE------------------------E---EEECTTCEEEEEEECCSS
T ss_pred eEEecCCCEEEEEEEccCCCCcceEEEEEeccCc------------------------c---cccCCCceEEEEEEcCCC
Confidence 3578889999999999643 357777765532 1 246789999999999999
Q ss_pred cceeeecccccch-hccceEEEEEec
Q 007735 508 GIWNLRTENLDSW-YLGQETYVRVVN 532 (591)
Q Consensus 508 G~W~~HCHil~H~-~~GM~~~~~V~~ 532 (591)
|.|.+||+..-|. |.+|...+.|+.
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999986665 689999998864
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.03 E-value=6.7e-06 Score=76.56 Aligned_cols=87 Identities=10% Similarity=0.106 Sum_probs=60.3
Q ss_pred cEEeeCCCEEEEEEEEC-C----CCCceeeecCccCCCCCCCCCC-----------------------CC--CCCccCCC
Q 007735 59 TINVTTNNNVVVNVRNK-L----DESLLIHWSGIQQRRSSWQDGL-----------------------LG--TNCPIPPK 108 (591)
Q Consensus 59 ~i~v~~Gd~v~v~v~N~-l----~~~~siH~HG~~~~~~~~~DGv-----------------------~~--tq~~I~PG 108 (591)
.+++...+..++.+.+. . ..++-+|+||..+..-....|. |. --..++||
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~ 141 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 141 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCC
Confidence 45666666665555443 2 3468899999976321111111 11 01247899
Q ss_pred CcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 109 WNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 109 ~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
+..+.+|.+ |.+|.|.||||...+...||.-.++.++
T Consensus 142 g~~~ir~~a-dnpG~Wl~HCHi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 142 GWLLLAFRT-DNPGAWLFHCHIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp SEEEEEEEC-CSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred CEEEEEEEC-CCCeEEEEEccCCcccccCCeEEEEEcc
Confidence 999999999 7899999999999999999988876655
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.01 E-value=4.6e-06 Score=66.51 Aligned_cols=76 Identities=18% Similarity=0.315 Sum_probs=53.0
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|+ +.|.-...+++...+... ..+ ....+.||++++|.|+ .+|+|.|+|.. +.
T Consensus 16 F~P~~i~I~~GdtV~--f~n~d~~~h~~~~~~~~~--~~~------~~~~~~~g~~~~~tF~---~~G~y~Y~C~~--H~ 80 (91)
T d1bxua_ 16 FEPSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQPE--LSH------KDLAFSPGETFEATFS---EPGTYTYYCEP--HR 80 (91)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEETTCGG--GCE------EEEECSTTCEEEEECC---SCEEEEEECTT--TG
T ss_pred EECCEEEECCCCEEE--EEECCcCCceEEeccccc--ccc------cccccCCCCCEEEEec---cCceEEEEeCC--CC
Confidence 445899999999865 678755555554444311 001 1235678998887764 68999999965 66
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|+
T Consensus 81 ~~gM~G~I~Ve 91 (91)
T d1bxua_ 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 77999999985
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.99 E-value=7e-07 Score=73.48 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC------C-CCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL------G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~------~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
...|++++||+|+ +.|.-...+......-. ..++.. . ......|++++++.|+++.++|+|||+|-
T Consensus 18 P~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T d2cj3a1 18 PAKLTIKPGDTVE--FLNNKVPPHNVVFDAAL-----NPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 90 (105)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECSSS-----STTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CCEEEECCCCEEE--EEECCCCceeeEeccCC-----CCccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeC
Confidence 3599999999865 56664444333332211 111111 0 12346899999999998778999999997
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
. +...||.|.|+|+
T Consensus 91 ~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 91 P--HRGAGMVGKITVA 104 (105)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred C--CcCCCcEEEEEEe
Confidence 5 7888999999996
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=97.99 E-value=1e-05 Score=66.33 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=53.8
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhh
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHF 132 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 132 (591)
+|-.++|.+++||+|. +.|.-..++++++..- .+|... ....+.||++++|.|+ ++|+|.|+|..+
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~d~~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf~---~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTFT---EAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEEC---SCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceeEEEecc-------cCCcccccccccCCCceEEEEec---CCeEEEEEecCC-
Confidence 5666799999999875 5787556666554331 112222 3355789999888874 689999999653
Q ss_pred hhhcCceeeEEEe
Q 007735 133 QRASGGFGGFIIN 145 (591)
Q Consensus 133 q~~~Gl~G~liV~ 145 (591)
.||.|.|+|+
T Consensus 96 ---~~M~G~I~Ve 105 (105)
T d2ov0a1 96 ---PFMRGKVVVE 105 (105)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCCEEEEEEC
Confidence 4899999985
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=97.97 E-value=5.1e-06 Score=70.22 Aligned_cols=77 Identities=9% Similarity=0.074 Sum_probs=49.8
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.++|++++||+|+.. |.-......-.++ ...++. ......+|++++|.| +.+|+|.|+|.. +...
T Consensus 20 P~~ltV~~GDTV~f~--n~d~~~h~~~~~~------~~~~~~--~~~~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~ 84 (123)
T d1pmya_ 20 PALVRLKPGDSIKFL--PTDKGHNVETIKG------MAPDGA--DYVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEEEE--CSSSSCCCEECTT------SSCTTC--CCCBCCTTSCEEEEC---CSCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEEEe--eCCCCcccccccc------cCcccc--ccccccccccccccc---CCCceEEEEecc--CCCC
Confidence 489999999997654 4422221111111 112222 124456777777666 458999999976 7778
Q ss_pred CceeeEEEecCC
Q 007735 137 GGFGGFIINNRA 148 (591)
Q Consensus 137 Gl~G~liV~~~~ 148 (591)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 85 GMVALVVVGDKR 96 (123)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEECCCC
Confidence 999999997643
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=1.7e-05 Score=70.79 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=61.4
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc-
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG- 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG- 508 (591)
+++.++.|++|.++|.|.....+.+|.||... .. . .+. .|.||+..+-+|.+...+
T Consensus 86 P~IraevGD~i~V~f~N~a~~p~SiH~HGv~~------~~----~------~~~-------~v~PGet~tY~w~v~~~~g 142 (179)
T d2j5wa4 86 PQLHADVGDKVKIIFKNMATRPYSIHAHGVQT------ES----S------TVT-------PTLPGETLTYVWKIPERSG 142 (179)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEESSCBC------SC----S------CCC-------CBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCCEEEEEEEeCCCCCEeEeeccccC------CC----C------CCC-------cccCCccEEEEEEecCccC
Confidence 45788999999999999998999999999852 00 0 011 268999999999875433
Q ss_pred ---------ceeeeccccc--chhccceEEEEEe
Q 007735 509 ---------IWNLRTENLD--SWYLGQETYVRVV 531 (591)
Q Consensus 509 ---------~W~~HCHil~--H~~~GM~~~~~V~ 531 (591)
.|.||||+.. +...||...+.|.
T Consensus 143 p~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc 176 (179)
T d2j5wa4 143 AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC 176 (179)
T ss_dssp CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEE
T ss_pred CccCCCCceeEEEecCCCcHHHhhCCCeEEEEEE
Confidence 8999999843 5578999988876
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.83 E-value=1.1e-05 Score=65.03 Aligned_cols=77 Identities=10% Similarity=0.202 Sum_probs=45.6
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC--C-CCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL--G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~--~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
..+|++++||+|+....+.- ..... ..... ...+.+ . ......+++++++.| +.+|+|+|+|-. +
T Consensus 18 P~~i~V~~GdtV~f~~~~~~--~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~Y~C~~--H 85 (97)
T d2jxma1 18 PKALSISAGDTVEFVMNKVG--PHNVI----FDKVP-AGESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTP--H 85 (97)
T ss_dssp SSEEEECTTCEEEEEECSSC--CCCBE----EEECC-TTSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSS--T
T ss_pred CCEEEECCCCEEEEEECCCc--ceeEE----EecCC-CccccccccccccccCcceEEEEec---CCCeEEEEEEcc--C
Confidence 36899999999876544332 21111 11110 011111 1 223445666665555 469999999964 6
Q ss_pred hhcCceeeEEEe
Q 007735 134 RASGGFGGFIIN 145 (591)
Q Consensus 134 ~~~Gl~G~liV~ 145 (591)
...||.|.|+|+
T Consensus 86 ~~~GM~G~I~Ve 97 (97)
T d2jxma1 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 678999999985
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.83 E-value=2.2e-05 Score=66.61 Aligned_cols=91 Identities=10% Similarity=0.039 Sum_probs=62.0
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCCceeeecCccC--------------------CC-CCCCCCCCCCCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDESLLIHWSGIQQ--------------------RR-SSWQDGLLGTNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~~siH~HG~~~--------------------~~-~~~~DGv~~tq~~I~PG~~~ 111 (591)
+|---.|.| +.|++|+|+|+|.-..+..+-.|-+.. .. .+..+.+......|.||++.
T Consensus 14 kf~~~~i~V~k~G~~V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~ 93 (129)
T d2ccwa1 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEcCCcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceE
Confidence 355578998 689999999999965442221122100 00 01111111123568999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+..|++| .++|+|+|-|-.-.++ .||.|.|.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999997 4799999999887776 6999999985
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.77 E-value=2.4e-05 Score=65.95 Aligned_cols=77 Identities=6% Similarity=-0.068 Sum_probs=49.8
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|+.. |.-...+....++. ...+. ......++++|+|.|+ .+|+|+|+|-. +...
T Consensus 20 P~~itI~~GdtV~f~--n~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~tF~---~~G~Y~Y~C~p--H~~~ 84 (123)
T d1adwa_ 20 PAFVRAEPGDVINFV--PTDKSHNVEAIKEI-----LPEGV---ESFKSKINESYTLTVT---EPGLYGVKCTP--HFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEE--ESSSSCCCEECTTS-----CCTTC---CCCBCCTTCCEEEEEC---SCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEEEEE--eCCCCcceecccCc-----ccccc---ccccccCCcceEEecc---CCCeEEEEEcc--CCCC
Confidence 479999999997775 44222211111111 11111 2345677777777774 58999999976 6778
Q ss_pred CceeeEEEecCC
Q 007735 137 GGFGGFIINNRA 148 (591)
Q Consensus 137 Gl~G~liV~~~~ 148 (591)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 85 GMVGLVQVGDAP 96 (123)
T ss_dssp TCEEEEEESSSC
T ss_pred CCEEEEEECCCC
Confidence 999999997643
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.74 E-value=3.8e-05 Score=64.94 Aligned_cols=91 Identities=11% Similarity=0.099 Sum_probs=64.2
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCCceeeecC--cc-------------------CCCCCCCCCCCCCCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDESLLIHWSG--IQ-------------------QRRSSWQDGLLGTNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~~siH~HG--~~-------------------~~~~~~~DGv~~tq~~I~PG~~~ 111 (591)
+|=-..|.| +.|++|+|+|+|.-..++.+=.|- +. ....+.++.+......|.||++.
T Consensus 14 ~Fd~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 354578999 589999999999966543322221 10 00012233333333569999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+..|+++ +++|+|=|-|-.-.++ .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 9999997 5799999999877777 7999999985
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.70 E-value=4e-05 Score=64.08 Aligned_cols=78 Identities=12% Similarity=0.068 Sum_probs=49.6
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|.. +|.- .+++++.-. ..+.+|.. .....+++++++.|+ .+|+|.|+|.. +.
T Consensus 18 F~P~~itI~~GDTV~f--~n~~-~~Hnv~~~~-----~~~~~~~~--~~~~~~~~~~s~tF~---~~G~y~Y~Ctp--H~ 82 (120)
T d1paza_ 18 FEPAYIKANPGDTVTF--IPVD-KGHNVESIK-----DMIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCTP--HY 82 (120)
T ss_dssp EESSEEEECTTCEEEE--EESS-SSCCCEECT-----TCSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TG
T ss_pred EeCCEEEECCCCEEEE--eeCC-CcceEeecc-----ccCccccc--ccccccCceEEEEec---CCCeEEEEEee--CC
Confidence 3357899999999855 4542 233333211 11222221 133355677666664 68999999975 67
Q ss_pred hcCceeeEEEecC
Q 007735 135 ASGGFGGFIINNR 147 (591)
Q Consensus 135 ~~Gl~G~liV~~~ 147 (591)
..||.|.|+|.++
T Consensus 83 ~~GM~G~I~Vg~~ 95 (120)
T d1paza_ 83 AMGMIALIAVGDS 95 (120)
T ss_dssp GGTCEEEEEESSS
T ss_pred CCCCEEEEEECCC
Confidence 7899999999875
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.69 E-value=3.9e-05 Score=65.05 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=63.0
Q ss_pred CCCCCcEEeeCC-CEEEEEEEECCCCCceeeecCccC--C-------------------CCCCCCCCCCCCCccCCCCcE
Q 007735 54 KFPGPTINVTTN-NNVVVNVRNKLDESLLIHWSGIQQ--R-------------------RSSWQDGLLGTNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~~G-d~v~v~v~N~l~~~~siH~HG~~~--~-------------------~~~~~DGv~~tq~~I~PG~~~ 111 (591)
+|--..|.|+.| ++|+|+|+|.-.-+..+=-|-+-. . ..+.++.+......|.||++.
T Consensus 14 ~fd~~~i~V~aG~e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~ 93 (129)
T d1cuoa_ 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCcccEEEEeCCCEEEEEEEEeCCcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccc
Confidence 455578999999 799999999965442221111100 0 001122221123568999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
+..|+++ .++|+|-|-|-.-.++ .||.|.|+|++
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred eEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 9999997 4599999999876676 69999999974
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.67 E-value=3.8e-05 Score=64.55 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=48.4
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
...|++++||+|.. +|.-. ....|... . ...+|. ......++++|+|.|+ .+|+|.|+|.. +...
T Consensus 20 P~~itI~~GdTV~w--~n~~~-~~~~~~~~---~--~~p~~~--~~~~~~~~~~~s~Tf~---~~G~Y~Y~C~p--H~~~ 84 (124)
T d1bqka_ 20 PASLKVAPGDTVTF--IPTDK-GHNVETIK---G--MIPDGA--EAFKSKINENYKVTFT---APGVYGVKCTP--HYGM 84 (124)
T ss_dssp SSEEEECTTCEEEE--ECSSS-SCCCEECT---T--CSCTTC--CCCBCCTTCCEEEECC---SCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCeEEE--EECCC-Cccccccc---c--cCCCcc--ccccccCCccEEEecC---CCceEEEEecc--CcCC
Confidence 46899999999654 55421 22222111 1 111221 1244677787777664 58999999975 6778
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.+.
T Consensus 85 GM~G~IvVgd~ 95 (124)
T d1bqka_ 85 GMVGVVQVGDA 95 (124)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999863
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.65 E-value=6.6e-05 Score=61.34 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=52.1
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
|-.|-.+.|.+++||+| ++.|.-..++++....... ..++ .....+.||++|+|.|+ ++|+|.|+|-.+
T Consensus 28 ~~~F~P~~i~V~~GdtV--~f~N~d~~~H~v~~~~~~~----~~~~--f~s~~~~~~~~~~~tf~---~~G~y~y~C~~H 96 (106)
T d1id2a_ 28 KMKYLTPEVTIKAGETV--YWVNGEVMPHNVAFKKGIV----GEDA--FRGEMMTKDQAYAITFN---EAGSYDYFCTPH 96 (106)
T ss_dssp TTEESSSEEEECTTCEE--EEEECSSSCBCCEECTTTS----SSSC--EECCCBCTTEEEEEEEC---SCEEEEEECSSC
T ss_pred cCEEeCCEEEECCCCEE--EEEECCCCceeEEeccccC----Cccc--ccccccCCCceEEEecC---CCeEEEEEccCC
Confidence 44566679999999986 5678744454443322110 0111 12234678888887774 699999999764
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
.||.|.|+|+
T Consensus 97 ----~~M~G~I~Ve 106 (106)
T d1id2a_ 97 ----PFMRGKVIVE 106 (106)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCCEEEEEEC
Confidence 4899999985
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.52 E-value=0.0001 Score=62.22 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=62.7
Q ss_pred CCCCCcEEee-CCCEEEEEEEECCCCCceeeecCc--------------------cCCCCCCCCC-CCCCCCccCCCCcE
Q 007735 54 KFPGPTINVT-TNNNVVVNVRNKLDESLLIHWSGI--------------------QQRRSSWQDG-LLGTNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~-~Gd~v~v~v~N~l~~~~siH~HG~--------------------~~~~~~~~DG-v~~tq~~I~PG~~~ 111 (591)
+|=-.+|.|+ .|++|+|+|+|.-.-++.+=.|-+ .....+.+|. +......|.||++.
T Consensus 14 ~fd~~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCcCCeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 3555789996 599999999999655443322221 0000111221 11123568999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+..|++| .++|+|=|-|-.-.++ .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 9999997 4789999999977777 7999999985
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.50 E-value=0.00027 Score=59.03 Aligned_cols=87 Identities=15% Similarity=0.214 Sum_probs=59.7
Q ss_pred eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceee
Q 007735 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGS 123 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt 123 (591)
.+..+...+=.|-...|.++.|++|+++++|. +.. ||..... . +-+..+.||+.-+..|++ +++|+
T Consensus 33 ~~v~v~a~~~~f~p~~l~vp~G~~V~~~lts~-DV~-----H~f~ip~---~----~v~~d~~PG~~~~~~~~~-~~~G~ 98 (122)
T d2cuaa_ 33 YTVYVLAFAFGYQPNPIEVPQGAEIVFKITSP-DVI-----HGFHVEG---T----NINVEVLPGEVSTVRYTF-KRPGE 98 (122)
T ss_dssp EEEEEEEETTEEESSSEEEETTSEEEEEEEBS-SSC-----EEEEETT---S----SCEEEECBTBCEEEEEEC-CSCEE
T ss_pred EEEEEEEEeccccCCEEEEeCCCEEEEEEEcC-Ccc-----ceeEecC---C----CeeEEEecCceEEEEEEe-cccee
Confidence 33344333333334589999999999999997 222 4543321 1 112447799999999997 79999
Q ss_pred eEEecCh---hhhhhcCceeeEEEec
Q 007735 124 FFYFPSL---HFQRASGGFGGFIINN 146 (591)
Q Consensus 124 ~wYH~H~---~~q~~~Gl~G~liV~~ 146 (591)
|+|.|+. ..+ .+|.|-|+|++
T Consensus 99 y~~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 99 YRIICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred EEEEehhccCCCc--ccCeEEEEEEC
Confidence 9999984 233 47999999974
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.41 E-value=0.00026 Score=62.62 Aligned_cols=75 Identities=13% Similarity=0.219 Sum_probs=61.9
Q ss_pred EEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC-c
Q 007735 430 SVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN-V 507 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN-p 507 (591)
.++.++.|+++.|.|.|.+.. .+.||++||+|.||+.++.. .+|...|++.|.+|+...+.+.++. +
T Consensus 55 ~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via~DG~~-----------v~P~~~d~i~i~~GqR~dvlv~~~~~~ 123 (168)
T d1v10a2 55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS-----------HQPLTVDSLTIFAGQRYSVVVEANQAV 123 (168)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE-----------EEEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEEeCCee-----------cCceEEeEEEEccCceEEEEEECCCCC
Confidence 467788999999999998754 78999999999999997432 2377889999999999999999975 6
Q ss_pred cceeeecc
Q 007735 508 GIWNLRTE 515 (591)
Q Consensus 508 G~W~~HCH 515 (591)
|.|-++-.
T Consensus 124 ~~y~ira~ 131 (168)
T d1v10a2 124 GNYWIRAN 131 (168)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 76655543
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.35 E-value=8.4e-05 Score=66.94 Aligned_cols=93 Identities=12% Similarity=-0.047 Sum_probs=58.5
Q ss_pred EEeccCCcEEEEEEecCCCc----------------------ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccc
Q 007735 431 VINGTYRGFMEVILQNNDTK----------------------MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIART 488 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~----------------------~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rD 488 (591)
++.++.|+.+++.+.|.-.. ...+|+||-+. -....|. + . +....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~--~~~~DG~-----~--~---~~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT--PDDSDGY-----P--E---AWFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCC--CGGGSCC-----T--T---SCBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeecccc--CCccCCC-----c--c---cccccC
Confidence 35677899999999995321 34699999752 0111110 0 0 011111
Q ss_pred eE-EeCCCcEEEEEEEeCCc-cceeeecccc----cchhccceEEEEEecCCC
Q 007735 489 TT-QVYPGAWTAILVSLDNV-GIWNLRTENL----DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 489 Tv-~Vpp~g~~~irf~adNp-G~W~~HCHil----~H~~~GM~~~~~V~~p~~ 535 (591)
.+ ..+++.....+|.++.+ |.|.||||.. .+...||...+.|.++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 11 12345566778888875 8899999974 367789999999988764
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.33 E-value=0.00014 Score=65.13 Aligned_cols=84 Identities=7% Similarity=0.052 Sum_probs=67.2
Q ss_pred EEEEECCC--------CCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEE
Q 007735 47 QVIAINGK--------FPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWT 112 (591)
Q Consensus 47 ~~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~ 112 (591)
..++|||+ -+...|.+++|++.++||.|... ....++.+|..+.. -..||.+. ....|.||++++
T Consensus 34 d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~~~~~i~~GqRyd 112 (181)
T d2q9oa2 34 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYD 112 (181)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEEECCceEEE-EEeCCeEccceEeCEEEecCCcEEE
Confidence 45789986 23468999999999999999964 56679999987653 57899874 345699999999
Q ss_pred EEEEeCCceeeeEEecChh
Q 007735 113 YQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 113 Y~f~~~~~~Gt~wYH~H~~ 131 (591)
.-+++.+..|.||......
T Consensus 113 vlv~a~~~~~~Y~ir~~~~ 131 (181)
T d2q9oa2 113 VVIDASRAPDNYWFNVTFG 131 (181)
T ss_dssp EEEECCSCSSEEEEEEECC
T ss_pred EEEeCCCCCccEEEEEecc
Confidence 9999966689999987753
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.33 E-value=0.00015 Score=64.46 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=66.6
Q ss_pred eEEEEECCC--------CCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGK--------FPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
....+|||+ -+.++|.+++|+++++|+.|... ....++..|..+.. -..||++. ....|.||+++
T Consensus 34 pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~v-ia~DG~~v~P~~~~~l~i~~gqR~ 112 (172)
T d1hfua2 34 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 112 (172)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEE-EEeCCEEcccEEeceEeccCCeEE
Confidence 355788886 45688999999999999999864 56678888876643 46899874 34669999999
Q ss_pred EEEEEeCCceeeeEEecCh
Q 007735 112 TYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+.-+++.+..|.||.....
T Consensus 113 dvlv~~~~~~~~Y~ira~~ 131 (172)
T d1hfua2 113 SFVLDANQPVDNYWIRAQP 131 (172)
T ss_dssp EEEEECCSCSSEEEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEEe
Confidence 9999996567999998763
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.28 E-value=0.0003 Score=62.31 Aligned_cols=82 Identities=15% Similarity=0.152 Sum_probs=65.4
Q ss_pred EEEECCC--------CCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEE
Q 007735 48 VIAINGK--------FPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTY 113 (591)
Q Consensus 48 ~~~~Ng~--------~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y 113 (591)
...+||+ -+.++|.+++|+++++|+.|... ....++.+|..+.. -..||++. ....|.|||+++.
T Consensus 38 ~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~d~l~i~~gqRydv 116 (170)
T d1gyca2 38 ATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTV-IEVDGINSQPLLVDSIQIFAAQRYSF 116 (170)
T ss_dssp EEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEE
T ss_pred cccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEE-EEeCCeeccceEeeEEEecCCeEEEE
Confidence 4677875 34578999999999999999964 56778888876543 57899874 3466999999999
Q ss_pred EEEeCCceeeeEEecCh
Q 007735 114 QFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 114 ~f~~~~~~Gt~wYH~H~ 130 (591)
.+++.+..|.||-+...
T Consensus 117 lv~~~~~~~~y~ira~~ 133 (170)
T d1gyca2 117 VLNANQTVGNYWIRANP 133 (170)
T ss_dssp EEECCSCSSEEEEEEEE
T ss_pred EEeCCCCCCcEEEEEec
Confidence 99996558999998653
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.08 E-value=0.0012 Score=54.96 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=53.7
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+.|.|.|.|.+ ..|.|.+-+. +=.+.+.||....+.|.+++||.+.
T Consensus 49 l~vp~G~~V~~~lts~D-V~H~f~ip~~---------------------------~v~~d~~PG~~~~~~~~~~~~G~y~ 100 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD-VIHGFHVEGT---------------------------NINVEVLPGEVSTVRYTFKRPGEYR 100 (122)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETTS---------------------------SCEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEcCC-ccceeEecCC---------------------------CeeEEEecCceEEEEEEeccceeEE
Confidence 45788999999999986 5576654322 1223567888889999999999999
Q ss_pred eecccccc-hhccceEEEEEe
Q 007735 512 LRTENLDS-WYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHil~H-~~~GM~~~~~V~ 531 (591)
+.|+..-. -|.+|...+.|.
T Consensus 101 ~~C~~~CG~~H~~M~g~i~V~ 121 (122)
T d2cuaa_ 101 IICNQYCGLGHQNMFGTIVVK 121 (122)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EEehhccCCCcccCeEEEEEE
Confidence 99997321 245788888886
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.83 E-value=0.0019 Score=50.71 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=50.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+ |.+...|.....+.. +..-+...+.+|... .+.++.||.
T Consensus 19 ~~i~I~~GdtV~f~--n~d~~~h~~~~~~~~-----------------------~~~~~~~~~~~g~~~--~~tF~~~G~ 71 (91)
T d1bxua_ 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETF--EATFSEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCcCCceEEecccc-----------------------cccccccccCCCCCE--EEEeccCce
Confidence 45778899999875 666666644332211 112355566677654 466799999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+.|+|.. |..+||-..+.|+
T Consensus 72 y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEC
Confidence 9999987 8889999988874
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.77 E-value=0.0022 Score=55.86 Aligned_cols=95 Identities=16% Similarity=0.095 Sum_probs=72.9
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccc--eEEeCCCcEEEEEEEeCCc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIART--TTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rD--Tv~Vpp~g~~~irf~adNp 507 (591)
+.++.+.|++|. ++.+..+..-+||+-|-.|--|-.. |.+ .|++.++ |+.|++|+-.++.|.+.-|
T Consensus 70 ~aL~AkvGEtV~-~~~~gpN~~SsfHvIGg~~D~V~~~-G~~----------~n~p~~~~qT~~v~~G~a~~~~~tf~~P 137 (178)
T d1mzya2 70 GALKAKVGDNVL-FVHSQPNRDSRPHLIGGHGDLVWET-GKF----------HNAPERDLETWFIRGGTAGAALYKFLQP 137 (178)
T ss_dssp GCEEEETTCEEE-EEEEESSSCBCEEEETCCEEEEETT-CCT----------TSCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred CCcccccCCeEE-EecccCCCCCCcccccCccceEccC-Ccc----------CCCCCCCceEEEecCCceeEEEEEeCCC
Confidence 346677899984 3444445677999999999655432 322 2455554 8899999999999999999
Q ss_pred cceeeecccccc-hhccceEEEEEecCCCC
Q 007735 508 GIWNLRTENLDS-WYLGQETYVRVVNPEAT 536 (591)
Q Consensus 508 G~W~~HCHil~H-~~~GM~~~~~V~~p~~~ 536 (591)
|.+.|--|.+.. ..+|.+..++|..++.+
T Consensus 138 G~Y~~VdH~l~~A~~kGA~g~l~V~G~~~p 167 (178)
T d1mzya2 138 GVYAYVNHNLIEAVHKGATAHVLVEGEWDN 167 (178)
T ss_dssp EEEEEEESSHHHHHTTCCEEEEEEESCCCT
T ss_pred eEEEEEccHHHHHHhCCCeEEEEeCCCCCc
Confidence 999999999755 69999999999866543
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=96.71 E-value=0.00053 Score=55.46 Aligned_cols=85 Identities=13% Similarity=0.030 Sum_probs=58.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..++++.|++|.|+ |.+...|..++....+.. +. .........++..+.|+....+.|.+ +.||
T Consensus 19 ~~l~v~~GdtV~f~--n~~~~~h~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G 83 (105)
T d2q5ba1 19 ANVTVHPGDTVKWV--NNKLPPHNILFDDKQVPG-----AS--------KELADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEEE--ECSSCCEEEEECGGGSGG-----GC--------HHHHHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceeEeecCcccc-----cc--------cccCCccccccccccCCceEEEEEEeccCCc
Confidence 45778899998875 555566766554333200 00 00001234567778888888888874 6799
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.|+|.. |..+||-..+.|+
T Consensus 84 ~y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECST--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--CCCCCCEEEEEEc
Confidence 99999986 9999999999885
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=96.71 E-value=0.0038 Score=56.96 Aligned_cols=77 Identities=9% Similarity=0.157 Sum_probs=61.9
Q ss_pred eEEEeccCCcEEEEEEecCCCc-ceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC-
Q 007735 429 TSVINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN- 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN- 506 (591)
..++.++.|+++.+.|.|.+.. .+.|||+||.|+||+.++.. .+|...|.+.|.+|+..-|.+++|.
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~-----------v~P~~v~~l~i~pGqRydvlv~~~~~ 142 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNY-----------VQPFYTSDIDIYSGESYSVLITTDQN 142 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSC
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEE-----------cccceeeeEEEccCcEEEEEEEecCC
Confidence 3567889999999999999865 79999999999999997432 2477789999999999999999976
Q ss_pred cc-ceeeeccc
Q 007735 507 VG-IWNLRTEN 516 (591)
Q Consensus 507 pG-~W~~HCHi 516 (591)
+| .|.++-..
T Consensus 143 ~~~~y~i~~~~ 153 (209)
T d1aoza2 143 PSENYWVSVGT 153 (209)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCceEEEEec
Confidence 44 35455333
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=96.66 E-value=0.00059 Score=54.55 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=50.0
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|+ |.+...|.+..+... ...+.. ....-+...+.+|... .+.++.||.
T Consensus 19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~~--------~~~~~~--------~~~~~~~~~~~~g~t~--~~tf~~~G~ 78 (98)
T d1pcsa_ 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADG--------VPADTA--------AKLSHKGLLFAAGESF--TSTFTEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSS--------SCHHHH--------HHHCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEEe--ECCCCccceEEeccc--------cCCCcc--------ccccccccccCCCcEE--EEeccCCce
Confidence 46788999999887 555566754433211 000000 0011233445566544 345689999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+.|||.. |...||...|.|+
T Consensus 79 y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEecc--CCCCCCEEEEEEC
Confidence 9999976 9999999999884
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=96.65 E-value=0.0013 Score=52.42 Aligned_cols=81 Identities=19% Similarity=0.106 Sum_probs=51.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|+ |.+...|.++.+.... . ... ..+....+.....++.. +.+.++.||.
T Consensus 18 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~~-------~--~~~------~~~~~~~~~~~~~~~~t--~~~tf~~~G~ 78 (98)
T d2plta_ 18 KTLTIKSGETVNFV--NNAGFPHNIVFDEDAI-------P--SGV------NADAISRDDYLNAPGET--YSVKLTAAGE 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECGGGS-------C--TTC------CHHHHCEEEEECSTTCE--EEEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCCc-------c--ccc------cCCcccccccccCCCce--EEEEecCCce
Confidence 45678899998886 5555677665543321 0 000 00112234444445544 5567799999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+-|+|.. |..+||-..|.|+
T Consensus 79 y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEeCc--CCCCCCEEEEEEC
Confidence 9999986 9999999998874
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=95.83 E-value=0.0036 Score=51.97 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=28.7
Q ss_pred EEEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 500 ILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 500 irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
+.+.++.||.|.|+|.+ |..+||...+.|.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECCCC
Confidence 45667999999999988 9999999999997653
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=95.75 E-value=0.0053 Score=53.71 Aligned_cols=80 Identities=15% Similarity=0.036 Sum_probs=58.2
Q ss_pred eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCCC------CCCccCCCCcEEEEEE
Q 007735 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLLG------TNCPIPPKWNWTYQFQ 116 (591)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~~------tq~~I~PG~~~~Y~f~ 116 (591)
....+++||+. .|++.++ |.++++|+.|... ....+++ +|..+.. -..||.+. ....|.||++++.-++
T Consensus 40 ~gd~~lvNG~~-~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 116 (165)
T d1kv7a2 40 FGDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVLVE 116 (165)
T ss_dssp CCSEEEETTBS-SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred cCCEEEEcCcc-cceEecc-CcEEEEEEEEcccCceeeEEecCCCeEEE-EEeCCccccCceEeCeEEECCCCEEEEEEE
Confidence 34579999996 7999986 7799999999854 5557776 6754332 46899653 3466999999999999
Q ss_pred eCCceeeeEEe
Q 007735 117 VKDQVGSFFYF 127 (591)
Q Consensus 117 ~~~~~Gt~wYH 127 (591)
+.+..+..|++
T Consensus 117 ~~~~~~~~~~~ 127 (165)
T d1kv7a2 117 VNDNKPFDLVT 127 (165)
T ss_dssp ECTTCCEEEEE
T ss_pred CCCCCcEEEEE
Confidence 85433345554
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=95.62 E-value=0.02 Score=47.66 Aligned_cols=99 Identities=6% Similarity=-0.047 Sum_probs=66.3
Q ss_pred EEEeccCC-cEEEEEEecCCCcceeeeecCceEEEEEEcCCC-C-----CCC-CCCCCCCC-CCCccceEEeCCCcEEEE
Q 007735 430 SVINGTYR-GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGE-W-----TDN-SRGTYNKW-DGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 430 ~v~~~~~g-~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~-~-----~~~-~~~~~n~~-~p~~rDTv~Vpp~g~~~i 500 (591)
..+.++.| +.|.++|.|.+..+|-+ =+|.+-+...+... . ... ....+... +.+..-|..|.||+...|
T Consensus 18 ~~i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~i 95 (129)
T d1cuoa_ 18 RSISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV 95 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred cEEEEeCCCEEEEEEEEeCCcCCcee--EEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccceE
Confidence 45677889 89999999999888664 23455333322100 0 000 00011111 123345788999999999
Q ss_pred EEEe---CCccceeeecccccchhccceEEEEEe
Q 007735 501 LVSL---DNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 501 rf~a---dNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|++ ..||.+.|=|=+--|| .||-..+.|.
T Consensus 96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d1cuoa_ 96 KFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLE 128 (129)
T ss_dssp EEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEE
T ss_pred EEEccccCCCceEEEEeCCCCcc-cCcEEEEEEe
Confidence 9987 4699999999998898 8999999886
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=95.54 E-value=0.0064 Score=50.12 Aligned_cols=32 Identities=9% Similarity=0.297 Sum_probs=28.0
Q ss_pred EEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.+.+|.||.|.|+|-. |..+||-..+.|.++.
T Consensus 65 s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 65 VLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (120)
T ss_dssp EEECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred EEEecCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence 4667999999999987 9999999999998753
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=95.42 E-value=0.0044 Score=54.78 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=61.4
Q ss_pred eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCCC------CCCccCCCCcEEEEE
Q 007735 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLLG------TNCPIPPKWNWTYQF 115 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~~------tq~~I~PG~~~~Y~f 115 (591)
.....+++||+. .|.+.++ |.++++|+.|... ....+++ +|..+.. -..||.+. ....|.|||+++.-+
T Consensus 46 ~~Gd~~lvNG~~-~p~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~v-Ia~DG~~l~~P~~~~~l~l~pgeR~dvlv 122 (174)
T d1gska2 46 FCGETILVNGKV-WPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIII 122 (174)
T ss_dssp CCCSEEEETTEE-SCEEECC-SSEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred ccCCeEEecCcc-ceEEEec-CceEEEEEEecccCceeeEeecCCCcEEE-EEECCCcccCceEeCEEEEcCCcEEEEEE
Confidence 334578999996 7999986 5689999999965 4667888 5754322 45898653 235589999999999
Q ss_pred EeCCceeeeEEecC
Q 007735 116 QVKDQVGSFFYFPS 129 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H 129 (591)
++.+.+|++|+--+
T Consensus 123 ~~~~~~g~~~~l~~ 136 (174)
T d1gska2 123 DFTAYEGESIILAN 136 (174)
T ss_dssp ECGGGTTCEEEEEE
T ss_pred ECCCCCCceEEEEc
Confidence 98766787777544
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.42 E-value=0.0092 Score=43.52 Aligned_cols=45 Identities=7% Similarity=0.006 Sum_probs=36.3
Q ss_pred eCCCcEEEEEEEeCCcc----------ceeeeccccc--chhccceEEEEEecCCCC
Q 007735 492 VYPGAWTAILVSLDNVG----------IWNLRTENLD--SWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 492 Vpp~g~~~irf~adNpG----------~W~~HCHil~--H~~~GM~~~~~V~~p~~~ 536 (591)
|.||++.+-+|.+...| .|.||||+.. +...||...+.|..+...
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~l 59 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTL 59 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSS
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCCc
Confidence 67899999999986554 8999999955 557799999999877643
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.37 E-value=0.025 Score=46.92 Aligned_cols=99 Identities=6% Similarity=-0.080 Sum_probs=67.0
Q ss_pred eEEEec-cCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCC-------CCCCCCC-CC-CCCCCccceEEeCCCcEE
Q 007735 429 TSVING-TYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEW-------TDNSRGT-YN-KWDGIARTTTQVYPGAWT 498 (591)
Q Consensus 429 ~~v~~~-~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~-------~~~~~~~-~n-~~~p~~rDTv~Vpp~g~~ 498 (591)
...+++ +.|+.|.++|.|.+...|-+=+| ..-++..+ ... ....... +. -.+-+..-|..|.||+..
T Consensus 17 ~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGH--NWVLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CSEEEECTTCSEEEEEEECCSSSCHHHHCB--CCEEEEGG-GHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cceEEEecCCCEEEEEEEeCCccchheeec--Ccccccch-hHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 345677 47999999999999988876444 33233221 000 0000001 10 011244567889999999
Q ss_pred EEEEEe---CCccceeeecccccchhccceEEEEEe
Q 007735 499 AILVSL---DNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 499 ~irf~a---dNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.|.+ +.||.+.|=|=+-.|| .||-..+.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 999986 5899999999999999 9999999874
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=95.13 E-value=0.011 Score=46.86 Aligned_cols=82 Identities=16% Similarity=0.056 Sum_probs=48.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|+ |.+...|.+......+ ..+ .... . . ....+.....||.... +.++.||.
T Consensus 17 ~~iti~~GdtV~f~--n~~~~~Hnv~~~~~~~-----~~~-~~~~-~--~----~~~~~~~~~~~g~t~~--~tF~~~G~ 79 (99)
T d1plca_ 17 SEFSISPGEKIVFK--NNAGFPHNIVFDEDSI-----PSG-VDAS-K--I----SMSEEDLLNAKGETFE--VALSNKGE 79 (99)
T ss_dssp SEEEECTTCEEEEE--ECSSCCBCCEECTTSS-----CTT-CCHH-H--H----CCCTTCCBCSTTCEEE--EECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCccEEEccCcC-----CCc-cccc-c--C----cccccccccCCCceEE--EecCCCce
Confidence 45788999999884 6666678765332211 000 0000 0 0 0111222234566544 45689999
Q ss_pred eeeecccccchhccceEEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V 530 (591)
+-|+|- .|..+||-..+.|
T Consensus 80 y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEeC--CCcCCCcEEEEEE
Confidence 999995 4999999998876
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=94.97 E-value=0.034 Score=46.20 Aligned_cols=99 Identities=7% Similarity=-0.035 Sum_probs=64.0
Q ss_pred EEEec-cCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCC------CCCCCCCCC-CCCC-CCccceEEeCCCcEEEE
Q 007735 430 SVING-TYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGE------WTDNSRGTY-NKWD-GIARTTTQVYPGAWTAI 500 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~------~~~~~~~~~-n~~~-p~~rDTv~Vpp~g~~~i 500 (591)
..+.+ +.|+.|.++|.|.+..+|-+=. |.|-++..+.-. ........+ ...+ .+.--|..|.||+...|
T Consensus 18 ~~i~V~k~G~~V~l~~~N~g~l~h~~m~--hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~i 95 (129)
T d2ccwa1 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMG--HNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSV 95 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHC--BCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ceEEEecCCCEEEEEEEcCCcCchheee--ccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceEEE
Confidence 44666 5799999999999887654422 344444322100 000000001 1111 12234677889999999
Q ss_pred EEEe---CCccceeeecccccchhccceEEEEEe
Q 007735 501 LVSL---DNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 501 rf~a---dNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|++ +.||.+-|=|=+--|| .||-..++|.
T Consensus 96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 96 TFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9998 5899999999999998 8999999884
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=94.90 E-value=0.023 Score=45.37 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=45.7
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.| .|.+...|.++.... .... ..-+.-.+.+++. .++.++.||.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~~H~v~~~~~----------~~~~-----------~~~~~~~~~~g~~--~~~tf~~pG~y 88 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAMPHNVHFVAG----------VLGE-----------AALKGPMMKKEQA--YSLTFTEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTT----------TSSS-----------SCEECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEEecc----------cCCc-----------ccccccccCCCce--EEEEecCCeEE
Confidence 456788999988 477777887653221 1100 0112223345554 45566899999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|+|-+ | .||...+.|+
T Consensus 89 ~y~C~~--H--~~M~G~I~Ve 105 (105)
T d2ov0a1 89 DYHCTP--H--PFMRGKVVVE 105 (105)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEecC--C--CCCEEEEEEC
Confidence 999988 5 6898888874
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=94.49 E-value=0.056 Score=44.70 Aligned_cols=99 Identities=8% Similarity=-0.072 Sum_probs=68.6
Q ss_pred EEEecc-CCcEEEEEEecCCCcceeeeecCceEEEEEEcCCC------CCCCCCCCCCC--CCCCccceEEeCCCcEEEE
Q 007735 430 SVINGT-YRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGE------WTDNSRGTYNK--WDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 430 ~v~~~~-~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~------~~~~~~~~~n~--~~p~~rDTv~Vpp~g~~~i 500 (591)
..+.++ .|+.|.++|.|.+..+|.+=+| .+-++..+... -.......|-. .+++...|..+.||+...|
T Consensus 18 ~~i~V~~~ge~v~i~~~N~g~~pH~~~~h--n~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~i 95 (128)
T d1nwpa_ 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGH--NLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCB--CCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred CeEEEecCCcEEEEEEEeCCccccceeee--cccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCceEE
Confidence 446674 5999999999999999987544 44444432100 00000111222 2235567888999999999
Q ss_pred EEEe---CCccceeeecccccchhccceEEEEEe
Q 007735 501 LVSL---DNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 501 rf~a---dNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.+ +.||.+.|=|=+--|| .||-..+.|.
T Consensus 96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 96 TFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 9987 5799999999999999 8999998873
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=94.48 E-value=0.041 Score=43.13 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=28.7
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
...++.+ +.+.++.||.+.|+|-. |..+||-..|.|+
T Consensus 62 ~~~~~~~--~~~~f~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 62 LNSKGET--VVRKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECSTTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccCCCcE--EEEecCCCceEEEEeCC--CccCCCeEEEEEC
Confidence 3344554 35667899999999986 9999999999884
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=94.46 E-value=0.016 Score=45.62 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=26.5
Q ss_pred EEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 499 ~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.+.+.++.||.+.|+|-. |..+||-..+.|+
T Consensus 67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CEEEECCSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 456678999999999976 9999999999884
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=94.45 E-value=0.023 Score=46.89 Aligned_cols=32 Identities=13% Similarity=0.331 Sum_probs=27.7
Q ss_pred EEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.+.++.+|.|-|+|=+ |..+||...+.|.++.
T Consensus 65 ~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 65 TLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEEECSCEEEEEECGG--GGGGTCEEEEEESSSC
T ss_pred EEeccCCCeEEEEEcc--CCCCCCEEEEEECCCC
Confidence 4556899999999987 9999999999997653
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=94.22 E-value=0.0051 Score=49.04 Aligned_cols=30 Identities=7% Similarity=0.041 Sum_probs=25.6
Q ss_pred EEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 500 ILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 500 irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
..+.++.||.|.|+|.. |..+||-..|.|+
T Consensus 73 ~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 73 FKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred EEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 44566899999999987 9999999999884
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=93.93 E-value=0.057 Score=44.40 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=27.6
Q ss_pred EEEEeCCccceeeecccccchhccceEEEEEecC
Q 007735 500 ILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 500 irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
+.+.++.||.+-|+|.. |..+||-..+.|.++
T Consensus 64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDA 95 (124)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred EEEecCCCceEEEEecc--CcCCCCEEEEEECCC
Confidence 34667999999999987 999999999999754
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=93.70 E-value=0.051 Score=42.58 Aligned_cols=82 Identities=15% Similarity=0.006 Sum_probs=46.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|+ |.+...|-+...... ..... ... ......+.....++.. +.+.++.||.
T Consensus 17 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~----------~~~~~--~~~-~~~~~~~~~~~~~~~~--~~~tf~~~G~ 79 (99)
T d1bypa_ 17 SDLSIASGEKITFK--NNAGFPHNDLFDKKE----------VPAGV--DVT-KISMPEEDLLNAPGEE--YSVTLTEKGT 79 (99)
T ss_dssp SEEEECTTEEEEEE--ECSSCCBCCEECTTS----------SCTTC--CHH-HHSCCTTCCBCSTTCE--EEEEECSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCC----------CCCcc--ccc-cCcccccccccCCCce--EEEEecCCce
Confidence 45778999998885 655555544322110 00000 000 0001122222334444 4456689999
Q ss_pred eeeecccccchhccceEEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V 530 (591)
+-|+|-. |...||-..|.|
T Consensus 80 y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 80 YKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEECc--CCCCCCEEEEEE
Confidence 9999975 999999998887
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=93.50 E-value=0.02 Score=45.55 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=53.4
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..++++.|++|.|+ |.+...|...+... + ..... .........+.....++....+.|.+ +.||
T Consensus 19 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~---------~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G 83 (105)
T d2cj3a1 19 AKLTIKPGDTVEFL--NNKVPPHNVVFDAA---------L-NPAKS---ADLAKSLSHKQLLMSPGQSTSTTFPADAPAG 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECSS---------S-STTCC---HHHHHHHCEEEEECSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCceeeEeccC---------C-CCccc---cccCCcccccccccCCCcceEEEEEeccCCc
Confidence 45778999999885 44444443332211 0 00000 00000123466667777888888865 6799
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.+.|+|-. |-.+||-..|.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 84 EYTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--CcCCCcEEEEEEe
Confidence 99999976 9999999999885
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=91.19 E-value=0.25 Score=42.09 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=53.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|.+.+.+.| ..|. |+|-+. +=-..+-||-...+.|.+|.||.
T Consensus 27 n~l~lP~g~pV~~~ltS~D-ViHs-------F~vP~l--------------------~~k~daiPG~~~~~~~~~~~~G~ 78 (158)
T d1cyxa_ 27 NEIAFPANTPVYFKVTSNS-VMHS-------FFIPRL--------------------GSQIYAMAGMQTRLHLIANEPGT 78 (158)
T ss_dssp SEEEEETTSCEEEEEEESS-SCEE-------EEEGGG--------------------TEEEEECTTCCEEEEECCSSSEE
T ss_pred eeEEeeCCCeEEEEEEcCC-cchh-------hhhhhc--------------------ceeeccCCCceeeeeeeecCCCc
Confidence 4567888999999998875 4554 444221 11234567888899999999999
Q ss_pred eeeecccccch-hccceEEEEEec
Q 007735 510 WNLRTENLDSW-YLGQETYVRVVN 532 (591)
Q Consensus 510 W~~HCHil~H~-~~GM~~~~~V~~ 532 (591)
|...|..+-.. |..|...+.|+.
T Consensus 79 y~g~Cae~CG~gH~~M~~~v~vv~ 102 (158)
T d1cyxa_ 79 YDGICAEICGPGHSGMKFKAIATP 102 (158)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEES
T ss_pred EEEEchhhcCcccccCceEEEEEC
Confidence 99999976544 666766666553
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=90.46 E-value=0.34 Score=38.18 Aligned_cols=72 Identities=8% Similarity=0.002 Sum_probs=43.7
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.| .|.+...|.+-... +.. +. ..+ |.-.+.++.. ..+.++.||.+
T Consensus 35 ~i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~-~~--~~f--------~s~~~~~~~~--~~~tf~~~G~y 89 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVMPHNVAFKK----------GIV-GE--DAF--------RGEMMTKDQA--YAITFNEAGSY 89 (106)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECT----------TTS-SS--SCE--------ECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEecc----------ccC-Cc--ccc--------cccccCCCce--EEEecCCCeEE
Confidence 456778999877 47777777643221 100 00 011 1112233433 45667999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|+|=+ | .||-..+.|.
T Consensus 90 ~y~C~~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 90 DYFCTP--H--PFMRGKVIVE 106 (106)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEccC--C--CCCEEEEEEC
Confidence 999987 5 6999998874
|
| >d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=81.87 E-value=1.7 Score=36.44 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=56.2
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|.+.+...| -.|.| +|-+ .+=-...-||-...+.|.++.||.
T Consensus 67 ~~l~lP~g~~v~~~ltS~D-ViHsf-------~vP~--------------------l~~k~daiPG~~~~~~~~~~~~G~ 118 (152)
T d3dtub1 67 TAMVVPVNKTVVVQVTGAD-VIHSW-------TVPA--------------------FGVKQDAVPGRLAQLWFRAEREGI 118 (152)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEE-------EEGG--------------------GTEEEEECBTCCEEEEEECCSCEE
T ss_pred CeEEEeCCCEEEEEEecCc-hhhhh-------hccc--------------------ccEEEEcCCCCceEEEEEecCCCe
Confidence 3466789999999998774 46655 4422 222334466778888899999999
Q ss_pred eeeeccccc-chhccceEEEEEecCC
Q 007735 510 WNLRTENLD-SWYLGQETYVRVVNPE 534 (591)
Q Consensus 510 W~~HCHil~-H~~~GM~~~~~V~~p~ 534 (591)
+...|.-+- .-|..|...++|+.++
T Consensus 119 y~g~C~e~CG~~H~~M~~~v~vv~~~ 144 (152)
T d3dtub1 119 FFGQCSELCGISHAYMPITVKVVSEE 144 (152)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred eEeecHhhcCccccCCeEEEEEECHH
Confidence 999999654 4577788888888765
|