Citrus Sinensis ID: 007873
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 586 | 2.2.26 [Sep-21-2011] | |||||||
| Q43784 | 608 | Granule-bound starch synt | N/A | no | 0.964 | 0.929 | 0.724 | 0.0 | |
| O82627 | 608 | Granule-bound starch synt | N/A | no | 0.967 | 0.932 | 0.717 | 0.0 | |
| Q00775 | 607 | Granule-bound starch synt | N/A | no | 0.967 | 0.934 | 0.716 | 0.0 | |
| Q42857 | 608 | Granule-bound starch synt | N/A | no | 0.965 | 0.930 | 0.712 | 0.0 | |
| Q9MAQ0 | 610 | Probable granule-bound st | yes | no | 0.970 | 0.932 | 0.687 | 0.0 | |
| Q43092 | 603 | Granule-bound starch synt | N/A | no | 0.890 | 0.865 | 0.725 | 0.0 | |
| Q8LL05 | 565 | Granule-bound starch synt | N/A | no | 0.880 | 0.913 | 0.700 | 0.0 | |
| P09842 | 603 | Granule-bound starch synt | N/A | no | 0.923 | 0.897 | 0.656 | 0.0 | |
| P04713 | 605 | Granule-bound starch synt | N/A | no | 0.907 | 0.879 | 0.668 | 0.0 | |
| Q43134 | 608 | Granule-bound starch synt | N/A | no | 0.895 | 0.863 | 0.68 | 0.0 |
| >sp|Q43784|SSG1_MANES Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/578 (72%), Positives = 481/578 (83%), Gaps = 13/578 (2%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDDLQVKTMA 55
MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D LQ+KT
Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ- 57
Query: 56 SKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA 115
SK A NG P+ I+CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+A
Sbjct: 58 SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKTGGLGDVLGGLPPAMA 112
Query: 116 ANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAK 175
A GHRVMT++PRYDQYKDAWDT V +E+K+GD+IE VRFFH +KRGVDRVFVDHP FL K
Sbjct: 113 ARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRIETVRFFHSYKRGVDRVFVDHPMFLEK 172
Query: 176 VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235
VWGKT SKIYGPR G DYQDNQLRFSLLC AALEAPR+LNLNS+K FSGPYGE+V F+AN
Sbjct: 173 VWGKTGSKIYGPRAGLDYQDNQLRFSLLCLAALEAPRVLNLNSSKNFSGPYGEEVAFIAN 232
Query: 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 295
DWHT+L+PCYLK +Y+P G+YK AKV FCIHNIAYQGRFAF DF LNLP +FKSSFDFI
Sbjct: 233 DWHTALLPCYLKAIYQPMGIYKHAKVAFCIHNIAYQGRFAFSDFPRLNLPDKFKSSFDFI 292
Query: 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355
DGY KPV+GRKINWMKAGILESD VLTVSP+YAQE++SG ++GVELDN IRKTGI GI+N
Sbjct: 293 DGYEKPVKGRKINWMKAGILESDRVLTVSPYYAQEVISGVERGVELDNFIRKTGIAGIIN 352
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 415
GMDVQEWNP+TDKYI + YDA+TVMDAKPLLKEALQAEVGLPVDRN+P+IGFIGRLEEQK
Sbjct: 353 GMDVQEWNPVTDKYIDIHYDATTVMDAKPLLKEALQAEVGLPVDRNVPLIGFIGRLEEQK 412
Query: 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 475
GSDI AAI ++ NVQI++LGTGKK EKQ+E LE+LYP+KARGVAKFN+PLAHMI A
Sbjct: 413 GSDIFVAAISQLVEHNVQIVILGTGKKKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITA 472
Query: 476 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 535
GADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+ V+C+ +D
Sbjct: 473 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKID 532
Query: 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DVAA+ TV RAL TY T AL EM+ N MAQDLSWK
Sbjct: 533 SADVAAIVKTVARALGTYATAALREMILNCMAQDLSWK 570
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Responsible for the synthesis of amylose in reserve starch. Manihot esculenta (taxid: 3983) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 4EC: 2 |
| >sp|O82627|SSG1_ANTMA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/576 (71%), Positives = 475/576 (82%), Gaps = 9/576 (1%)
Query: 1 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDDLQVKTMASK 57
MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D LQ++ A +
Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQ 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
+ + NG P I+CG G+N++FV EV PWSKTGGLGDV+GGLPPA+A N
Sbjct: 60 SRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKTGGLGDVVGGLPPAMAGN 114
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMT++PRYDQYKDAWDT VV+E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVW
Sbjct: 115 GHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSIETVRFFHCYKRGVDRVFVDHPIFLEKVW 174
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT+SKIYGP G DYQDNQLRFSLLCQAALEAPR+LNL S+KYFSGPYGEDVVFVANDW
Sbjct: 175 GKTKSKIYGPNAGTDYQDNQLRFSLLCQAALEAPRVLNLTSSKYFSGPYGEDVVFVANDW 234
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ KGMY AKV FCIHNIAYQGRF DF LLNLP QFKSSFDF DG
Sbjct: 235 HTALLPCYLKSMYQSKGMYLHAKVAFCIHNIAYQGRFGSSDFCLLNLPDQFKSSFDFFDG 294
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKAGILESD V+TVSP+YA ELVSG +KGVELDN+I KT I GIVNGM
Sbjct: 295 YEKPVKGRKINWMKAGILESDRVVTVSPYYAMELVSGAEKGVELDNVIAKTSITGIVNGM 354
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
D QEWNP TDK+I YD +TVMDAKPLLKEALQA VGLPVD+NIPVIGFIGRLEEQKGS
Sbjct: 355 DTQEWNPATDKHIDTNYDITTVMDAKPLLKEALQAAVGLPVDKNIPVIGFIGRLEEQKGS 414
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AAI F+ +VQII+LGTGKK E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGA
Sbjct: 415 DILVAAISKFVGLDVQIIILGTGKKKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGA 474
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C VDP
Sbjct: 475 DFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPA 534
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV ++TTV RALA YG+ A EM++N MAQDLSWK
Sbjct: 535 DVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWK 570
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Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q00775|SSG1_SOLTU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/575 (71%), Positives = 479/575 (83%), Gaps = 8/575 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T
Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK-- 55
Query: 59 ATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG 118
T + A R + + G S IVCG G+N++FVGTEV PWSKTGGLGDVLGGLPPALAA G
Sbjct: 56 VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKTGGLGDVLGGLPPALAARG 114
Query: 119 HRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178
HRVMTI+PRYDQYKDAWDT V +E+KVGD IE VRFFHC+KRGVDRVFVDHP FL KVWG
Sbjct: 115 HRVMTISPRYDQYKDAWDTSVAVEVKVGDSIEIVRFFHCYKRGVDRVFVDHPMFLEKVWG 174
Query: 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238
KT SKIYGP+ G DY DN+LRFSLLCQAALEAP++LNLNS+ YFSGPYGEDV+F+ANDWH
Sbjct: 175 KTGSKIYGPKAGLDYLDNELRFSLLCQAALEAPKVLNLNSSNYFSGPYGEDVLFIANDWH 234
Query: 239 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 298
T+LIPCYLK+MY+ +G+Y +AKV FCIHNIAYQGRF+F DF LLNLP +F+ SFDFIDGY
Sbjct: 235 TALIPCYLKSMYQSRGIYLNAKVAFCIHNIAYQGRFSFSDFPLLNLPDEFRGSFDFIDGY 294
Query: 299 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358
KPV+GRKINWMKAGILES V+TVSP+YAQELVS DKGVELD+++RKT I GIVNGMD
Sbjct: 295 EKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAVDKGVELDSVLRKTCITGIVNGMD 354
Query: 359 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 418
QEWNP TDKY VKYD +TVMDAKPLLKEALQA VGLPVD+ IP+IGFIGRLEEQKGSD
Sbjct: 355 TQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAVGLPVDKKIPLIGFIGRLEEQKGSD 414
Query: 419 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478
IL AAI FI +VQI+VLGTGKK E+++EQLE+LYP KA+GVAKFN+PLAHMI AGAD
Sbjct: 415 ILVAAIHKFIGLDVQIVVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGAD 474
Query: 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
F+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP D
Sbjct: 475 FMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPAD 534
Query: 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
V + TTV RALA YGT A AEM+KN M+++LSWK
Sbjct: 535 VLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWK 569
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Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q42857|SSG1_IPOBA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2 | Back alignment and function description |
|---|
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/577 (71%), Positives = 470/577 (81%), Gaps = 11/577 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTMASKL 58
MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K
Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK- 58
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
+NG ++ G + IVC G+N++FVG EV PW KTGGLGDVLGGLPPALAA
Sbjct: 59 -----PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKTGGLGDVLGGLPPALAA 113
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT VV+EL+VGD+IE VRFFH +KRGVDRVFVDHP FL KV
Sbjct: 114 RGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRIEPVRFFHSYKRGVDRVFVDHPMFLEKV 173
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT S +YGP+ G+DY+DNQLRFSLLCQAALEAPR+LNLNS+ YFSGPYGEDVVFVAND
Sbjct: 174 WGKTGSMLYGPKAGKDYKDNQLRFSLLCQAALEAPRVLNLNSSNYFSGPYGEDVVFVAND 233
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WHT+L+PCYLKTMY+ +G+Y +AKV FCIHNIAYQGRFAF DF LLNLP ++K SFDFID
Sbjct: 234 WHTALLPCYLKTMYQSRGIYMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDEYKGSFDFID 293
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GY+KPV+GRKINWMKAGI E+D V TVSP+YA+ELVS KGVELDN IR GI GI NG
Sbjct: 294 GYDKPVKGRKINWMKAGIREADRVFTVSPNYAKELVSCVSKGVELDNHIRDCGITGICNG 353
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MD QEWNP TDKY+ VKYD +TVM AKPLLKEALQA VGLPVDRNIP+IGFIGRLEEQKG
Sbjct: 354 MDTQEWNPATDKYLAVKYDITTVMQAKPLLKEALQAAVGLPVDRNIPLIGFIGRLEEQKG 413
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDIL AAI FI +VQI++LGTGKK E+Q+EQLE++YP+KARGVAKFN+PLAHMI AG
Sbjct: 414 SDILYAAISKFISMDVQILILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAG 473
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
ADF+LIPSRFEPCGLIQLHAMRYGT I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP
Sbjct: 474 ADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDP 533
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV V TTV RALA YGT A EM+KN M+Q+LSWK
Sbjct: 534 EDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWK 570
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Required for the synthesis of amylose. Ipomoea batatas (taxid: 4120) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q9MAQ0|SSG1_ARATH Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/576 (68%), Positives = 469/576 (81%), Gaps = 7/576 (1%)
Query: 1 MATAVAASSFVSRSY---GHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ H +S + +K + + H GLRS N++D+LQ ++ A
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
++ + ++ IVC G++++F+G EV PWSKTGGLGDVLGGLPPALAA
Sbjct: 61 VSAKSSKRSSKVKTAG----KIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV A + V RA+A YGT A+ EM+KN M QD SWK
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWK 572
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Required for the synthesis of amylose in endosperm. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43092|SSG1_PEA Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/535 (72%), Positives = 449/535 (83%), Gaps = 13/535 (2%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
GLRSLN L V+T + +S + ++ + IVCG+ L +FVG EV PWS
Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPP LA NGHRVMT++PRYDQYKDAWDT+V++E+KVGDKIE VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKIETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 218
KRGVDRVFVDHP FL +VWGKT SK+YGP+TG DY+DNQLRFSLLCQAALEAPR+LNLNS
Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLNLNS 210
Query: 219 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED 278
+KYFSGPYGEDV+FVANDWH++LIPCYLK+MYK +G+YK+AKV FCIHNIAYQGR AF D
Sbjct: 211 SKYFSGPYGEDVIFVANDWHSALIPCYLKSMYKSRGLYKNAKVAFCIHNIAYQGRNAFSD 270
Query: 279 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338
F LLNLP +F+SSFDFIDGYNKP G+KINWMKAGILESD V TVSPHYA+EL+SGED+G
Sbjct: 271 FSLLNLPDEFRSSFDFIDGYNKPCEGKKINWMKAGILESDQVFTVSPHYAKELISGEDRG 330
Query: 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398
VELDNIIR TGI GIVNGMD +EW+P TD+YI V Y+ +TV +AKPLLK LQAE+GLPV
Sbjct: 331 VELDNIIRSTGIIGIVNGMDNREWSPQTDRYIDVHYNETTVTEAKPLLKGTLQAEIGLPV 390
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEK 458
D +IP+IGFIGRLEEQKGSDIL AI F ENVQI+VLGTGKK MEKQ+E LE YP K
Sbjct: 391 DSSIPLIGFIGRLEEQKGSDILVEAIAKFADENVQIVVLGTGKKIMEKQIEVLEEKYPGK 450
Query: 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 518
A G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+EG
Sbjct: 451 AIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEG 510
Query: 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
+TGF G F V+CE VDP DV ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK
Sbjct: 511 YTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWK 565
|
May be responsible for the synthesis of amylose. Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q8LL05|SSG1B_HORVU Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1 | Back alignment and function description |
|---|
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/521 (70%), Positives = 424/521 (81%), Gaps = 5/521 (0%)
Query: 54 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+A + AT+ + RN R+ S IVC G+ I+FV TEV PW KTGGLGDV+GGLPPA
Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPA 66
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
LAA GHRVMTIAPRYDQYKD WDT+V++E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL
Sbjct: 67 LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFL 126
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPYGE+VVFV
Sbjct: 127 EKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFV 186
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
ANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SFD
Sbjct: 187 ANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFD 246
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-G 352
F+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++ G
Sbjct: 247 FVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETG 306
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
IVNGMDV +WNP TDKYI VKY+A+TV A+ L KE LQAEVGL VD +IPVI FIGRLE
Sbjct: 307 IVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLE 366
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
EQKGSDIL AA P F++ENVQIIVLGTGKK ME++L LE+ YP+ ARG+AKFN+PLAHM
Sbjct: 367 EQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHM 426
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 532
+ AGADFI+IPSRFEPCGLIQL M YG VPI +STGGLVDTV EG TGF MGSF+V+ E
Sbjct: 427 MFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFE 486
Query: 533 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
VDP DVAAV + V RAL Y T M++N MAQDLSWK
Sbjct: 487 TVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWK 527
|
Involved in the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P09842|SSG1_HORVU Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1 | Back alignment and function description |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/547 (65%), Positives = 432/547 (78%), Gaps = 6/547 (1%)
Query: 31 KFRCMKHSGLRSLNIIDD-LQVKTMASKLA--TSRQAGRNGFRSQNGPSLMIVCGVGLNI 87
+FR GLR N D L ++T+ + A SR+A R R + ++ G G+N+
Sbjct: 21 RFRRPGFQGLRPRNPADAALGMRTIGASAAPKQSRKAHRGSRRCLS--VVVSATGSGMNL 78
Query: 88 LFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147
+FVG E+APWSKTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT V+ E+KV D
Sbjct: 79 VFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVISEIKVAD 138
Query: 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAA 207
+ E+VRFFHC+KRGVDRVF+DHPWFL KV GKT+ KIYGP G DY+DNQ RFSLLCQAA
Sbjct: 139 EYERVRFFHCYKRGVDRVFIDHPWFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAA 198
Query: 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHN 267
LEAPRILNLN+N YFSGPYGEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIHN
Sbjct: 199 LEAPRILNLNNNPYFSGPYGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHN 258
Query: 268 IAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY 327
I+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+Y
Sbjct: 259 ISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYY 318
Query: 328 AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387
A+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L K
Sbjct: 319 AEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNK 378
Query: 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEK 446
EALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK EK
Sbjct: 379 EALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEK 438
Query: 447 QLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 506
L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT + A
Sbjct: 439 LLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCA 498
Query: 507 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566
STGGLVDT+ EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM+KN M
Sbjct: 499 STGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCM 558
Query: 567 AQDLSWK 573
QDLSWK
Sbjct: 559 IQDLSWK 565
|
Required for the synthesis of amylose in endosperm. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|P04713|SSG1_MAIZE Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/537 (66%), Positives = 419/537 (78%), Gaps = 5/537 (0%)
Query: 39 GLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWS 98
G R+ D L ++T A +Q R G R PSL++ G+N++FVG E+APWS
Sbjct: 34 GARASAAADTLSMRTSARAAPRHQQQARRGGRF---PSLVVCASAGMNVVFVGAEMAPWS 90
Query: 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158
KTGGLGDVLGGLPPA+AANGHRVM ++PRYDQYKDAWDT VV E+K+GD E VRFFHC+
Sbjct: 91 KTGGLGDVLGGLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCY 150
Query: 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNS 218
KRGVDRVFVDHP FL +VWGKT+ KIYGP G DY+DNQLRFSLLCQAALEAPRIL+LN+
Sbjct: 151 KRGVDRVFVDHPLFLERVWGKTEEKIYGPVAGTDYRDNQLRFSLLCQAALEAPRILSLNN 210
Query: 219 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED 278
N YFSGPYGEDVVFV NDWHT + CYLK+ Y+ G+Y+ AK FCIHNI+YQGRFAF D
Sbjct: 211 NPYFSGPYGEDVVFVCNDWHTGPLSCYLKSNYQSHGIYRDAKTAFCIHNISYQGRFAFSD 270
Query: 279 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338
+ LNLP +FKSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G
Sbjct: 271 YPELNLPERFKSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARG 330
Query: 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398
ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPV
Sbjct: 331 CELDNIMRLTGITGIVNGMDVSEWDPSRDKYIAVKYDVSTAVEAKALNKEALQAEVGLPV 390
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP 456
DRNIP++ FIGRLEEQKG D++AAAIP ++ E+VQI++LGTGKK E+ L E +P
Sbjct: 391 DRNIPLVAFIGRLEEQKGPDVMAAAIPQLMEMVEDVQIVLLGTGKKKFERMLMSAEEKFP 450
Query: 457 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516
K R V KFN LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+
Sbjct: 451 GKVRAVVKFNAALAHHIMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTII 510
Query: 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
EG TGF MG SVDC V+P DV V+TT++RA+ GT A EM++N M QDLSWK
Sbjct: 511 EGKTGFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWK 567
|
Required for the synthesis of amylose in endosperm. Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
| >sp|Q43134|SSG1_SORBI Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1 | Back alignment and function description |
|---|
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/525 (68%), Positives = 415/525 (79%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLG 108
L ++T A + A R G R PSL++ G+N++FVG E+APWSKTGGLGDVLG
Sbjct: 46 LSMRTSACPAPRQQPAARRGGRGGRFPSLVVCATAGMNVVFVGAEMAPWSKTGGLGDVLG 105
Query: 109 GLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVD 168
GLPPA+AANGHRVM ++PRYDQYKDAWDT VV E+K+GD E VRFFHC+KRGVDRVF+D
Sbjct: 106 GLPPAMAANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGDGYETVRFFHCYKRGVDRVFID 165
Query: 169 HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGE 228
HP FL +VWGKT+ KIYGP G DY+DNQLRFSLLCQAALEAPRIL+LN+N YFSGPYGE
Sbjct: 166 HPLFLERVWGKTEEKIYGPDAGTDYKDNQLRFSLLCQAALEAPRILSLNNNPYFSGPYGE 225
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DVVFV NDWHT + CYLK+ Y+ G+YK AK FCIHNI+YQGRFAF DF LNLP +F
Sbjct: 226 DVVFVCNDWHTGPLSCYLKSNYQSNGIYKDAKTAFCIHNISYQGRFAFSDFPELNLPERF 285
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
KSSFDFIDGY KPV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R T
Sbjct: 286 KSSFDFIDGYEKPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLT 345
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
GI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDR IP++ FI
Sbjct: 346 GITGIVNGMDVSEWDPSKDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRKIPLVAFI 405
Query: 409 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468
GRLEEQKG D++AAAIP ++E++QI++LGTGKK E+ L E YP+K R V KFN
Sbjct: 406 GRLEEQKGPDVMAAAIPLLMEEDIQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAA 465
Query: 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS 528
LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG S
Sbjct: 466 LAHHIMAGADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLS 525
Query: 529 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
VDC V+P DV V+TT++RA+ GT A EM+KN M QDLSWK
Sbjct: 526 VDCNVVEPADVKKVATTLKRAIKVVGTPAYEEMVKNCMIQDLSWK 570
|
Sorghum bicolor (taxid: 4558) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 586 | ||||||
| 375151860 | 611 | GBSSII-2 [Citrus sinensis] | 0.977 | 0.937 | 0.998 | 0.0 | |
| 375151864 | 618 | GBSSII-2 [Prunus persica] | 0.923 | 0.875 | 0.793 | 0.0 | |
| 182636946 | 615 | granule bound starch synthase Ib precurs | 0.950 | 0.905 | 0.774 | 0.0 | |
| 225466653 | 614 | PREDICTED: granule-bound starch synthase | 0.970 | 0.926 | 0.751 | 0.0 | |
| 223029784 | 615 | granule-bound starch synthase [Nelumbo n | 0.972 | 0.926 | 0.75 | 0.0 | |
| 197725528 | 615 | granule-bound starch synthase [Nelumbo n | 0.974 | 0.928 | 0.751 | 0.0 | |
| 170676395 | 614 | granule bound starch synthase Ib precurs | 0.943 | 0.900 | 0.766 | 0.0 | |
| 375151862 | 613 | GBSSII-1 [Prunus persica] | 0.970 | 0.928 | 0.744 | 0.0 | |
| 258489621 | 609 | granule-bound starch synthase 1 [Gossypi | 0.967 | 0.931 | 0.740 | 0.0 | |
| 211906516 | 609 | granule bound starch synthase [Gossypium | 0.967 | 0.931 | 0.740 | 0.0 |
| >gi|375151860|gb|AFA36446.1| GBSSII-2 [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/573 (99%), Positives = 573/573 (100%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT 60
MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIID+LQVKTMASKLAT
Sbjct: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDELQVKTMASKLAT 60
Query: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
Sbjct: 61 SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR 120
Query: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
Sbjct: 121 VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180
Query: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS
Sbjct: 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240
Query: 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK
Sbjct: 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK 300
Query: 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360
PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ
Sbjct: 301 PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360
Query: 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 420
EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL
Sbjct: 361 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL 420
Query: 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480
AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI
Sbjct: 421 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480
Query: 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540
LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA
Sbjct: 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540
Query: 541 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
AVSTTVRRALATYGTQALAEMMKNGMAQDLSWK
Sbjct: 541 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151864|gb|AFA36448.1| GBSSII-2 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/542 (79%), Positives = 485/542 (89%), Gaps = 1/542 (0%)
Query: 33 RCMKHSGLRSLNIIDDLQVKTMASKLA-TSRQAGRNGFRSQNGPSLMIVCGVGLNILFVG 91
+ M H+GLR+LN +D+L+VK M + +A +R N R+ + P+ IVCG G+N++F+G
Sbjct: 39 QAMTHNGLRALNTVDELRVKIMGNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLG 98
Query: 92 TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151
TEV PWSKTGGLGDVLGGLPPA+AANGHRVMT++PRYDQYKDAWDT+V IE+KVG+K EK
Sbjct: 99 TEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEK 158
Query: 152 VRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAP 211
VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP GED++DNQLRFSLLC+AALEAP
Sbjct: 159 VRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEAP 218
Query: 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271
R+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK +Y+PKG+Y+SAKV FCIHNIAYQ
Sbjct: 219 RVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAYQ 278
Query: 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL 331
GRFA DF LLNLP +FKSSFDFIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL
Sbjct: 279 GRFASADFALLNLPDEFKSSFDFIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEEL 338
Query: 332 VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391
VS +KGVELDN+IRK GI GIVNGMDVQEWNPLTDKY KYDASTV DAKPLLKEALQ
Sbjct: 339 VSTVEKGVELDNVIRKAGILGIVNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEALQ 398
Query: 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQL 451
AEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIKENVQIIVLGTGKKPMEKQLEQL
Sbjct: 399 AEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQL 458
Query: 452 EILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 511
EI YP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGL
Sbjct: 459 EIKYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 518
Query: 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLS 571
VDTV+EGFTGFQMG F+V+CE VDP DV A++TTV RAL TYGT A E++ N MAQDLS
Sbjct: 519 VDTVKEGFTGFQMGGFNVECEVVDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDLS 578
Query: 572 WK 573
WK
Sbjct: 579 WK 580
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|182636946|gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica] gi|357528262|gb|AET80370.1| granule-bound starch synthase GBSS2 [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/564 (77%), Positives = 495/564 (87%), Gaps = 7/564 (1%)
Query: 14 SYGHEVASGLNSKA--SQMKF--RCMKHSGLRSLNIIDDLQVKTMASKLATSRQAGRNGF 69
SYG V+SG + K +M F + + H+GLR+LN +D+L+V+ MA+ +A RQ
Sbjct: 17 SYG-AVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIMANSVA--RQTRGKTV 73
Query: 70 RSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129
S S +IVCG G+N++F+GTEV PWSKTGGLGDVLGGLPPA+AANGHRVMTI+PRYD
Sbjct: 74 NSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYD 133
Query: 130 QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRT 189
QYKDAWDT+V +ELKVGDK E VRFFHC+KRGVDRVFVDHP FL KVWGKT SKIYGP
Sbjct: 134 QYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYGPVA 193
Query: 190 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTM 249
G D++DNQLRFSLLCQAAL APR+LNLNS+KYFSGPYGE+VVF+ANDWHT+L+PCYLK +
Sbjct: 194 GVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAI 253
Query: 250 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW 309
YKPKG+YK+AKV FCIHNIAYQGRFAF DF LLNLP +FKSSFDFIDGYNKPV+GRKINW
Sbjct: 254 YKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFIDGYNKPVKGRKINW 313
Query: 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY 369
MKAGILESD VLTVSP+YA+ELVS +KGVELDNI+RK+ I+GIVNGMDVQEWNP+TDKY
Sbjct: 314 MKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDKY 373
Query: 370 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
VKYDASTV DAKPLLKEALQAEVGLPVDR+IPVIGFIGRLEEQKGSDIL AIPHFIK
Sbjct: 374 TTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIK 433
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
ENVQIIVLGTGKKPMEKQLEQLE YP+KARG+AKFN+PLAHMI AGADF+L+PSRFEPC
Sbjct: 434 ENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRFEPC 493
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGF MG+F+V+CE VDPVDV A++TTV RA
Sbjct: 494 GLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTRA 553
Query: 550 LATYGTQALAEMMKNGMAQDLSWK 573
L +YGT A E++ N MAQDLSWK
Sbjct: 554 LGSYGTPAFTEIISNCMAQDLSWK 577
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225466653|ref|XP_002273608.1| PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Vitis vinifera] gi|296089007|emb|CBI38710.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/580 (75%), Positives = 499/580 (86%), Gaps = 11/580 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASG--LNSKASQMKFR----CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS+F+ RS + + KA+ K R + H+GLR+LN +D+L +T
Sbjct: 1 MAT-VTASNFLPRSSNGNCGATCRIEKKATLTKLRPKIQILAHNGLRALNSVDELHQRTT 59
Query: 55 ASKLATSRQAGRNGFRSQNG-PSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
+ +R+ R GF+++N P I+CG G++++FVGTEV PWSKTGGLGDVLGGLPPA
Sbjct: 60 ---IKVTRKGSRKGFKNENPRPWGGIICGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPA 116
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
++ANGHRVMT++PR+DQYKDAWDT V ++L VGD+ EKVRFFHC+KRGVDRVFVDHPWFL
Sbjct: 117 MSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFL 176
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SK+YGP GED+QDNQLRFSLLCQAALEAPRILNL S+KYFSGPYGEDVVF+
Sbjct: 177 EKVWGKTGSKLYGPLAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFI 236
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
ANDWHT+ + CYLKTMY+ KG Y +AKVVFCIHNIAYQGRFAF DF LLNLP +FKSSFD
Sbjct: 237 ANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDEFKSSFD 296
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
F DGY KPV+GRKINWMKAGILE+D VLTVSP+YA+ELVSG +KGVELDNI+R+TGI GI
Sbjct: 297 FTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGI 356
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413
+NGMDVQEWNPLTDKYI +KYDASTV +AK LLKEALQAE GLPVDRNIPVIGFIGRLEE
Sbjct: 357 INGMDVQEWNPLTDKYISIKYDASTVKEAKLLLKEALQAEAGLPVDRNIPVIGFIGRLEE 416
Query: 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473
QKGSDIL AAIP F+ NVQIIVLGTGKKPMEKQLEQLE YP+ ARGVAKFN+PLAHMI
Sbjct: 417 QKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHMI 476
Query: 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533
IAGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMGSFSV+C+A
Sbjct: 477 IAGADFLLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECDA 536
Query: 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
VDP D AV+T+V+RALATYGT AL EM++N MAQDLSWK
Sbjct: 537 VDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWK 576
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223029784|gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/580 (75%), Positives = 496/580 (85%), Gaps = 10/580 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIV-CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPA 113
A T+ QA +++N ++ CG G+N++FVG EV PWSKTGGLGDVLGGLPPA
Sbjct: 60 AK--TTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPA 117
Query: 114 LAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFL 173
+AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 118 MAANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFL 177
Query: 174 AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233
KVWGKT SKIYGP GEDY DNQLRFSLLCQAALEAPR+LNLNS+K+FSGPYGEDVVF+
Sbjct: 178 EKVWGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGEDVVFI 237
Query: 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD 293
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFD
Sbjct: 238 CNDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFD 297
Query: 294 FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
FIDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+ELVSG +KGVELDNIIRKTGI GI
Sbjct: 298 FIDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITGI 357
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413
VNG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEE
Sbjct: 358 VNGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEE 417
Query: 414 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473
QKGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMI
Sbjct: 418 QKGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMI 477
Query: 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 533
IAGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+A
Sbjct: 478 IAGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDA 537
Query: 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
VDP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWK
Sbjct: 538 VDPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWK 577
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197725528|gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] | Back alignment and taxonomy information |
|---|
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/579 (75%), Positives = 492/579 (84%), Gaps = 8/579 (1%)
Query: 1 MATAVAASSFVSRS----YGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDDLQVKTM 54
MAT V AS FVS S YG S + +Q+ R M H GLRS+N +D L ++
Sbjct: 1 MAT-VTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRAN 59
Query: 55 ASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL 114
A K T R G+ +I CG G+N++FVG EV PWSKTGGLGDVLGGLPPA+
Sbjct: 60 A-KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAM 118
Query: 115 AANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174
AANGHRVMT+APRYDQYKDAWDT V++E+KVGD+IE VRFFHC+KRGVDRVFVDHP FL
Sbjct: 119 AANGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLE 178
Query: 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234
KVWGKT SKIYGP +GEDY DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+
Sbjct: 179 KVWGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGEDVVFIC 238
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
NDWHT+L+PCYLKTMYK +G+Y++AKV FCIHNIAYQGRF+F DF LLNLP +FKSSFDF
Sbjct: 239 NDWHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFDF 298
Query: 295 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIV 354
IDGY+KPV+GRKINWMKAGILESD VLTVSP+YA+EL SG +KGVELDNIIRKTGI GIV
Sbjct: 299 IDGYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGIV 358
Query: 355 NGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQ 414
NG DVQEWNP TDKYI VKYDA+TVMDAKPLLKEALQ+EVGLPVDRNIPVIGFIGRLEEQ
Sbjct: 359 NGTDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEEQ 418
Query: 415 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474
KGSDILAA+IP FI ENVQIIVLGTGKK EKQLEQLEI YP+KARGVAKFN+PLAHMII
Sbjct: 419 KGSDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMII 478
Query: 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534
AGADF+LIPSRFEPCGLIQL M YGT+P+V+STGGLVDTV+EG+TGF MG+F+VDC+AV
Sbjct: 479 AGADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDAV 538
Query: 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DP DV AV+TTV++AL TYGT A+ +M+KN MAQ+ SWK
Sbjct: 539 DPADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWK 577
|
Source: Nelumbo nucifera Species: Nelumbo nucifera Genus: Nelumbo Family: Nelumbonaceae Order: Proteales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|170676395|gb|ACB30385.1| granule bound starch synthase Ib precursor [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/562 (76%), Positives = 486/562 (86%), Gaps = 9/562 (1%)
Query: 17 HEVASGLNSKASQMKFRCMK----HSGLRSLNIIDDLQVKTMASKLATSRQAGRNGFRSQ 72
H SKA+ R ++ H+GLR LN++D+L +T A QA R G + +
Sbjct: 19 HRSILSYESKAASTGLRSLRQTNTHNGLRILNLVDELLNRTPIQVKAV--QARRKGLQGK 76
Query: 73 N-GPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 131
N P+ +I+CG +N++F+GTEV PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY
Sbjct: 77 NVRPTGVIICG--MNLIFLGTEVGPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY 134
Query: 132 KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGE 191
KDAWDT V IE+KVGDK EKV FFHCHKRGVDRVFVDHP FL KVWGK+ +K+YGP GE
Sbjct: 135 KDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGE 194
Query: 192 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYK 251
DYQDNQLRFSL CQAALEAPR+LNL SNKYFSGPYGEDV+F+ANDWHT+LIPCYLK+MY+
Sbjct: 195 DYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQ 254
Query: 252 PKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMK 311
G+YK+A+VV+CIHNIAYQGRFAF DF LLNLP QFKSSFDF+DG+ KPV GRK NWMK
Sbjct: 255 SIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMK 314
Query: 312 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIG 371
AGILESD+VLTVSP+YA+ELVSG DKGVELDNIIR+TGI GIVNGMDVQEWNP TDKY+
Sbjct: 315 AGILESDLVLTVSPYYAEELVSGPDKGVELDNIIRRTGITGIVNGMDVQEWNPSTDKYLT 374
Query: 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 431
VKY+ASTV++ K LLKEALQAEVGLPVDRNIP+IGFIGRLEEQKGSDIL AAIP FIKEN
Sbjct: 375 VKYNASTVVEGKALLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAIPQFIKEN 434
Query: 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 491
+QI+ LGTGKK MEKQLEQLEI YP+KARGVAKFN+PLAHMIIAGADFILIPSRFEPCGL
Sbjct: 435 IQIVALGTGKKQMEKQLEQLEIAYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGL 494
Query: 492 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
IQL AMRYGTVPIVASTGGLVDTV+EGFTGFQMGSF+V+CEAVDP DV A++ TV+RALA
Sbjct: 495 IQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECEAVDPADVDALAKTVKRALA 554
Query: 552 TYGTQALAEMMKNGMAQDLSWK 573
+GT A E++KN MAQDLSWK
Sbjct: 555 VHGTLAFTEIIKNCMAQDLSWK 576
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375151862|gb|AFA36447.1| GBSSII-1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/576 (74%), Positives = 496/576 (86%), Gaps = 7/576 (1%)
Query: 3 TAVAASSFVSRSYGHEVASGLNSKAS--QMKF--RCMKHSGLRSLNIIDDLQVKTMASKL 58
+ +AAS FVSR+ SG ++ + QM + M H+GLRSL+ +D L++KT +
Sbjct: 2 STLAASHFVSRTSHVNGGSGSETRTNLGQMGLWNQPMTHNGLRSLSNLDMLRIKTRPN-- 59
Query: 59 ATSRQAGRNGFRSQNGPSL-MIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN 117
A RQA + +++ + IVCG G+N++FVG EV PWSKTGGLGDVLGGLPPALAAN
Sbjct: 60 AVPRQAMKKADKTEGDQCVGKIVCGTGMNLVFVGAEVGPWSKTGGLGDVLGGLPPALAAN 119
Query: 118 GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
GHRVMT++PRYDQYKDAWDT V++E++V KIE VRFFHC+KRGVDRVFVDHP FL +VW
Sbjct: 120 GHRVMTVSPRYDQYKDAWDTSVLVEIEVDGKIETVRFFHCYKRGVDRVFVDHPLFLERVW 179
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP+TGEDY+DNQLRFSLLCQAALEAPR+LNLNSNKYFSGPYGEDVVFVANDW
Sbjct: 180 GKTGSKIYGPKTGEDYKDNQLRFSLLCQAALEAPRVLNLNSNKYFSGPYGEDVVFVANDW 239
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+LIPCYLKT+YKP+G+YK+AKVVFCIHNIAYQGRF+F DF LL+LP + SFDFIDG
Sbjct: 240 HTALIPCYLKTIYKPRGLYKNAKVVFCIHNIAYQGRFSFSDFSLLDLPDHLRGSFDFIDG 299
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y+KPV+GRKINWMKAGILESD V+TVSP+YAQEL+SGEDKGVELDNIIRKTGI GI+NGM
Sbjct: 300 YDKPVKGRKINWMKAGILESDRVVTVSPYYAQELISGEDKGVELDNIIRKTGITGIINGM 359
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP DKY+ VKYD +TV+DAKPLLKEALQA+VGLPVDR+IPVIGFIGRLEEQKGS
Sbjct: 360 DVQEWNPARDKYLDVKYDNTTVLDAKPLLKEALQAQVGLPVDRDIPVIGFIGRLEEQKGS 419
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AI FI E VQII+LGTGK +E Q++QLEI +P KA GVAKFN+PLAHMII GA
Sbjct: 420 DILVEAISKFIGEEVQIIILGTGKNYLETQIKQLEIKFPGKAVGVAKFNVPLAHMIIGGA 479
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DF+LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V C+ VDP
Sbjct: 480 DFMLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVVCDEVDPA 539
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV A++TTV+RALA YGT AL EM++N MAQDLSWK
Sbjct: 540 DVTAIATTVKRALAAYGTPALNEMIQNCMAQDLSWK 575
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|258489621|gb|ACV72639.1| granule-bound starch synthase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/577 (74%), Positives = 489/577 (84%), Gaps = 10/577 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV V TV+RALATYGTQAL EM++N MAQD SWK
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWK 571
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906516|gb|ACJ11751.1| granule bound starch synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/577 (74%), Positives = 489/577 (84%), Gaps = 10/577 (1%)
Query: 1 MATAVAASSFVSRSYGHEVASGLNSKASQMKF----RCMKHSGLRSLNIIDDLQVKTMAS 56
MAT + S FVS + H + G ++KA+ + + M H+GLRSLN +D LQ++T +
Sbjct: 1 MAT-LTTSHFVS-TCSHFSSHGADTKANLAQVGARNQAMTHNGLRSLNKVDRLQMRTTNA 58
Query: 57 KLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA 116
K ++ + R P I+CG+G+NI+FV E PWSKTGGLGDVLGGLPPA+AA
Sbjct: 59 KAVVTKAMKQADHR----PLGKIICGIGMNIVFVSAECGPWSKTGGLGDVLGGLPPAMAA 114
Query: 117 NGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKV 176
GHRVMT+ PRYDQYKDAWDT V+++LKVGDK+ VRFFHC+KRGVDRVFVDHP FL KV
Sbjct: 115 KGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKV 174
Query: 177 WGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236
WGKT SKIYGPR G DY+DNQLRFSLLCQAALEAPR+LNLNS+K FSGPYGEDVVF+AND
Sbjct: 175 WGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIAND 234
Query: 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
WH++L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF DF LNLP +FKSSFDFID
Sbjct: 235 WHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFID 294
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
GYNKPV+GRKINWMKAGILES VLTVSP+YAQELVSGEDKGVELDNIIRKTGI GIVNG
Sbjct: 295 GYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNG 354
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
MDVQEWNP +DKYI VKYDA+TVM AKPLLKEALQAEVGLP D ++P+IGFIGRLEEQKG
Sbjct: 355 MDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKG 414
Query: 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476
SDILA AIP + EN QI+VLGTGKK MEKQ+EQLEI YP+ R VAKFN+PLAHMIIAG
Sbjct: 415 SDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVPLAHMIIAG 474
Query: 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536
AD+IL+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EGFTGFQMG+F+V+C+ VDP
Sbjct: 475 ADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDP 534
Query: 537 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV V TV+RALATYGTQAL EM++N MAQD SWK
Sbjct: 535 SDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWK 571
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 586 | ||||||
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.970 | 0.932 | 0.664 | 1.2e-207 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.892 | 0.858 | 0.642 | 1.8e-183 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.795 | 0.588 | 0.399 | 6.2e-85 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.807 | 0.725 | 0.386 | 6.4e-83 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.563 | 0.693 | 0.384 | 2.9e-58 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.612 | 0.741 | 0.344 | 3.1e-51 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.612 | 0.741 | 0.344 | 3.1e-51 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.554 | 0.671 | 0.372 | 1.1e-50 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.573 | 0.670 | 0.361 | 1.3e-50 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.639 | 0.786 | 0.326 | 8.8e-47 |
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2008 (711.9 bits), Expect = 1.2e-207, P = 1.2e-207
Identities = 383/576 (66%), Positives = 457/576 (79%)
Query: 1 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDDLQVKTMASK 57
MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D+LQ ++ A K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-K 59
Query: 58 LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXX 117
+++ + R+ G IVC G++++F+G EV PWSKT
Sbjct: 60 PVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAAR 116
Query: 118 XHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVW 177
HRVMTI PRYDQYKDAWDT VV+++KVGDK+E VRFFHC+KRGVDRVFVDHP FLAKV
Sbjct: 117 GHRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVV 176
Query: 178 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237
GKT SKIYGP TG DY DNQLRFSLLCQAALEAP++LNLNS+KYFSGPYGEDVVFVANDW
Sbjct: 177 GKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDW 236
Query: 238 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG 297
HT+L+PCYLK+MY+ +G+Y +AKVVFCIHNIAYQGRFAF+D+ LLNLP FKSSFDF+DG
Sbjct: 237 HTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDG 296
Query: 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 357
Y KPV+GRKINWMKA ILE+ VLTVSP+YAQEL+SG D+GVEL +R + GI+NGM
Sbjct: 297 YEKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGM 356
Query: 358 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417
DVQEWNP TDKYI +KYD +TV DAKPL+KEALQA VGLPVDR++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGS 416
Query: 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477
DIL AI F+ NVQ+++LGTGKK ME Q+ +LE +P KA GVAKFN+PLAHMI AGA
Sbjct: 417 DILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGA 476
Query: 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537
DFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP
Sbjct: 477 DFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPD 536
Query: 538 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
DV A + V RA+A YGT A+ EM+KN M QD SWK
Sbjct: 537 DVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWK 572
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 1780 (631.7 bits), Expect = 1.8e-183, P = 1.8e-183
Identities = 338/526 (64%), Positives = 402/526 (76%)
Query: 49 LQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWSKTXXXXXXX 107
L V T A +++ + G S+ PS+++ G G+N++FVG E+APWSKT
Sbjct: 48 LSVTTSARATPKQQRSVQRG--SRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVL 105
Query: 108 XXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFV 167
HRVM I+PRYDQYKDAWDT VV E+KV D+ E+VRFFHC+KRGVDRVF+
Sbjct: 106 GGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFI 165
Query: 168 DHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG 227
DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YG
Sbjct: 166 DHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYG 225
Query: 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 287
EDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +
Sbjct: 226 EDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSER 285
Query: 288 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 347
F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R
Sbjct: 286 FRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRL 345
Query: 348 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I F
Sbjct: 346 TGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAF 405
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467
IGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN
Sbjct: 406 IGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 465
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 527
PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG
Sbjct: 466 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRL 525
Query: 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWK 573
SV+C+ V+P DV V+ T++RA+ GT A EM++N M QDLSWK
Sbjct: 526 SVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWK 571
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 198/496 (39%), Positives = 273/496 (55%)
Query: 85 LNILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N++ V E AP+SKT HRVM + PRY +Y +A D V K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V +FH GVD VF+D P F + IYG G D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFR-----HLSNNIYG---GNRL-DILKRMVLFC 411
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
+AA+E P + Y G ++ F+ANDWHT+L+P YLK Y+ G+ K + V
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLV 467
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IHNIA+QGR +DF ++LP+ + SF D PV G N AG+ +D VLTVS
Sbjct: 468 IHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVS 523
Query: 325 PHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDAST 378
Y+ E+ + E G L NII + K GIVNG+D QEWNP D Y+ Y
Sbjct: 524 HGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLEN 582
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 438
+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++LG
Sbjct: 583 LHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLG 642
Query: 439 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
TG+ +E+ L Q+E Y +KARG F++ AH I AGAD +L+PSRFEPCGL QL+AM
Sbjct: 643 TGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMN 702
Query: 499 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--Q 556
YGT+P+V + GGL DTV++ F + D + + + L TY +
Sbjct: 703 YGTIPVVHAVGGLRDTVQQ-FDPYSETGLGW---TFDSAEAGKLIHALGNCLLTYREYKE 758
Query: 557 ALAEMMKNGMAQDLSW 572
+ + + GM QDLSW
Sbjct: 759 SWEGLQRRGMTQDLSW 774
|
|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 195/504 (38%), Positives = 286/504 (56%)
Query: 86 NILFVGTEVAPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY------DQ-YKDAWDTD 138
N++FV +E AP+SKT HRVM I+PRY D+ Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL 198
+ + + ++V F+H ++ GVD VFVDH K + + + YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258
RF+LLC AA EAP +L L F+ YGE +F+ NDWH L+P L Y+P G+YK
Sbjct: 256 RFTLLCHAACEAPLVLPLGG---FT--YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKD 310
Query: 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI-DGYNKPVR---GRKINWMKAGI 314
A+ + IHN+A+QG + L LP+++ + ++ + + G +N +K I
Sbjct: 311 ARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAI 370
Query: 315 LESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGV 372
+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I
Sbjct: 371 VTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPF 429
Query: 373 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 432
Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++
Sbjct: 430 HYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDI 488
Query: 433 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLI 492
Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL
Sbjct: 489 QFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLN 548
Query: 493 QLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAAVSTTVRRALA 551
QL+AMRYGT+P+V TGGL DTVE F + G V P+ ++ + +R A A
Sbjct: 549 QLYAMRYGTIPVVHGTGGLRDTVEN-FNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAA 607
Query: 552 TYGT--QALAEMMKNGMAQDLSWK 573
TY Q+ +M+ GM ++ SW+
Sbjct: 608 TYREYKQSWEGLMRRGMTRNYSWE 631
|
|
| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 135/351 (38%), Positives = 199/351 (56%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFK 289
V ++DWHT+++ L+ Y+ +Y+ K V+ IHN+ +QG F E + LL L ++
Sbjct: 128 VLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLLELGDEYF 187
Query: 290 SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG 349
S + ++ Y +N+MK GI+ SD + VSP Y +E + E G +LD ++RK
Sbjct: 188 HS-EQLEFYGN------VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYN 239
Query: 350 IK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
K GIVNG+D +NP TD YI +YDA ++ + K K ALQ GLP + P+I
Sbjct: 240 DKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KNENKRALQRYFGLPEKEDTPIISM 298
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467
+ RL +QKG D++ ++E+VQ I+LG+G E+ E + YPEK + FN
Sbjct: 299 VTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNE 358
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 525
LAH + AG+D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G
Sbjct: 359 ELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNG 418
Query: 526 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKVS 575
+ A D + TV RA+ Y +++ E ++K M +D SW+ S
Sbjct: 419 FSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKS 463
|
|
| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 134/389 (34%), Positives = 205/389 (52%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 550 LATYGTQALAEMMK---NGMAQDLSWKVS 575
L Y Q EM+K M Q+ SW+ S
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEES 470
|
|
| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 134/389 (34%), Positives = 205/389 (52%)
Query: 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKP 252
Y DN RF A L+ L + P D++ ANDWHT L+P LKT Y+
Sbjct: 106 YADNGERFGFFSAACLDVLPKLGIQ-------P---DIIH-ANDWHTGLVPFLLKTRYRY 154
Query: 253 KGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 312
++ K V +HN ++G F++ ++ P S +F+ Y ++ ++A
Sbjct: 155 DSFFEQVKSVLTVHNAIFKGIFSYHQLEVI--PELNLSGMEFLQ-YGHD----HVSMLRA 207
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIG 371
GI +D V VSP+YA EL++ +D+ +R+ + GIVNG D EWNP TD Y+
Sbjct: 208 GIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLP 267
Query: 372 VKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
Y + ++ K L K ALQ E+ LPV ++P+ G + RL QKG L + F++
Sbjct: 268 ATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLR 326
Query: 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
NVQ++++GTG+ + +L ++ + K V ++ LAH + AG+DF L+PS FE C
Sbjct: 327 NNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEAC 386
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
GL Q+++M YGT+PIV GGL DTV + + F + + P A+ T++RA
Sbjct: 387 GLNQIYSMAYGTLPIVREVGGLKDTVND-YDKFPERATGFGYQEPTP---EALLITMQRA 442
Query: 550 LATYGTQALAEMMK---NGMAQDLSWKVS 575
L Y Q EM+K M Q+ SW+ S
Sbjct: 443 LLFY-LQQPEEMLKVQQRAMQQNFSWEES 470
|
|
| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 135/362 (37%), Positives = 194/362 (53%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DV+ +DW T+LIP L+ + VF IHN+AYQG F LP+
Sbjct: 132 DVIH-CHDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSAL 190
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
++ ++++ Y + +N MK IL +D++ TVS Y +E+++ +G L+ ++ +
Sbjct: 191 FTT-EWLEYYGQ------LNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARR 242
Query: 349 G--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIG 406
G + GIVNG+D EWNP DK I Y A + K K LQ E+G+P ++P+IG
Sbjct: 243 GDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIG 301
Query: 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA--- 463
+ RL EQKG D++ +P + +Q ++LGTG LE+L + A ++
Sbjct: 302 MVSRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY---LERLNSFRSKGAANISINL 358
Query: 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------E 516
FN PLA I AG+D L+PSRFEPCGL QL AMRYGTVP+V TGGL DTV
Sbjct: 359 GFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPR 418
Query: 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKVS 575
EG TGF F+ D A + RALA Y ++ +M+ GM +D+SW +
Sbjct: 419 EG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNA 467
Query: 576 IG 577
G
Sbjct: 468 AG 469
|
|
| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 129/357 (36%), Positives = 196/357 (54%)
Query: 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKS 290
VF A+DWHT+ +P +L T+Y+ + A V +HN+ +QG F +L + +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEH-- 196
Query: 291 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KT 348
F F+ G K + N +K G+ + ++ TVS YA+E+ + E G LD ++R
Sbjct: 197 -FTFL-GLEKD---NQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSA 250
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
+ GI+NG+D +EWNP TD +I Y S + K L K +Q GLP ++P+ G +
Sbjct: 251 DLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLV 309
Query: 409 GRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 468
GRL +QKG DILA AI + +VQ+++LG G+ + YPEK +N
Sbjct: 310 GRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNG 369
Query: 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE----EGFTGFQM 524
L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+VE + TG
Sbjct: 370 LSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGF 429
Query: 525 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581
+S D +A+ V T RR A+A ++ N MA+ +W+ S +E
Sbjct: 430 KFWSHDADALFDTVGWTVHTWYRRK------DAMAALIGNAMAKRFTWEDSAARYEE 480
|
|
| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 131/401 (32%), Positives = 204/401 (50%)
Query: 188 RTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG--PYGEDVVFVANDWHTSLIPCY 245
R G Y D L F+ A +L + SG P+ V A+DWH L P Y
Sbjct: 90 RPGSPYHDTNL-FAYTDNVLRFA--LLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAY 146
Query: 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305
L +P AK VF +HN+AYQG F + LP F F+ I G G+
Sbjct: 147 LAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLPWSF---FN-IHGLE--FNGQ 194
Query: 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEW 362
I+++KAG+ +D + VSP YA+E+ + G+E L R+ + G++NG+D + W
Sbjct: 195 -ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIW 253
Query: 363 NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA 422
+P TD + +Y T+ D K K LQ +GL VD +P+ + RL QKG D++
Sbjct: 254 SPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE 312
Query: 423 AIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482
A+P +++ Q+ +LG G +++ YP + ++ +H I+ GAD IL+
Sbjct: 313 ALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILV 372
Query: 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV-DPVDVAA 541
PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + + + V V + + +
Sbjct: 373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--CSLENLADGVASGFVFEDSNAWS 430
Query: 542 VSTTVRRALATYGTQALAEMM-KNGMAQDLSWKVSIGTVQE 581
+ +RRA + +L + + MA D SW+V+ + +E
Sbjct: 431 LLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRE 471
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LL05 | SSG1B_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7005 | 0.8805 | 0.9132 | N/A | no |
| Q42857 | SSG1_IPOBA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7123 | 0.9658 | 0.9309 | N/A | no |
| P09842 | SSG1_HORVU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6563 | 0.9232 | 0.8971 | N/A | no |
| Q43784 | SSG1_MANES | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7249 | 0.9641 | 0.9292 | N/A | no |
| Q00775 | SSG1_SOLTU | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7165 | 0.9675 | 0.9341 | N/A | no |
| P04713 | SSG1_MAIZE | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6685 | 0.9078 | 0.8793 | N/A | no |
| O82627 | SSG1_ANTMA | 2, ., 4, ., 1, ., 2, 1 | 0.7170 | 0.9675 | 0.9325 | N/A | no |
| Q42968 | SSG1_ORYGL | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6723 | 0.8993 | 0.8653 | N/A | no |
| Q43092 | SSG1_PEA | 2, ., 4, ., 1, ., 2, 4, 2 | 0.7252 | 0.8907 | 0.8656 | N/A | no |
| A2Y8X2 | SSG1_ORYSI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6742 | 0.8993 | 0.8653 | N/A | no |
| Q43134 | SSG1_SORBI | 2, ., 4, ., 1, ., 2, 4, 2 | 0.68 | 0.8959 | 0.8634 | N/A | no |
| Q9MAQ0 | SSG1_ARATH | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6875 | 0.9709 | 0.9327 | yes | no |
| P27736 | SSG1_WHEAT | 2, ., 4, ., 1, ., 2, 4, 2 | 0.6247 | 0.9266 | 0.8829 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 586 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-154 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-124 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 2e-94 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 4e-82 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 5e-74 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 2e-62 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 4e-57 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-25 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-14 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-14 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 7e-13 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 8e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 6e-12 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 8e-10 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 3e-09 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 4e-09 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 7e-09 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 2e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-08 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 7e-08 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 2e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 1e-06 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-06 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-06 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 3e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 4e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 1e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 3e-05 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 3e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 9e-05 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 5e-04 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 6e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 8e-04 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 0.001 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.002 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 0.003 | |
| pfam14172 | 133 | pfam14172, DUF4309, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 545 bits (1408), Expect = 0.0
Identities = 201/503 (39%), Positives = 279/503 (55%), Gaps = 50/503 (9%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVI 141
+LFV +EVAP++KTGGLGDV+G LP ALA GH V I P+Y + D +
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLF 60
Query: 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFS 201
+ VG + E V F GV F+D+P + + +G DY+DN RF+
Sbjct: 61 GVPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLY-------DDSGYDYEDNAERFA 113
Query: 202 LLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV 261
L +AALE R L + + +DWHT L+P LK Y +K+ K
Sbjct: 114 LFSRAALELLRRLG-----------WKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIKT 161
Query: 262 VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321
VF IHN+AYQG F E L LP + D ++ Y + +N++KAGI+ +D V
Sbjct: 162 VFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQ------VNFLKAGIVYADAVT 215
Query: 322 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379
TVSP YA+E+++ E G LD ++ R + GI+NG+D WNP TD ++ Y A
Sbjct: 216 TVSPTYAREILTPEF-GEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA-DD 273
Query: 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 439
++ K K ALQ E+GLPVD + P+ GF+GRL EQKG D+L A+P ++ Q+++LG+
Sbjct: 274 LEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGS 333
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G E+ L +L YP + + ++ LAH+I AGADF L+PSRFEPCGL Q++AMRY
Sbjct: 334 GDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393
Query: 500 GTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
GTVPIV +TGGL DTV + TGF F + + A+ +RRALA Y
Sbjct: 394 GTVPIVRATGGLADTVIDYNEDTGEGTGF---VF-------EGYNADALLAALRRALALY 443
Query: 554 GTQ-ALAEMMKNGMAQDLSWKVS 575
A ++ +N MAQD SW S
Sbjct: 444 RDPEAWRKLQRNAMAQDFSWDRS 466
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 531 bits (1371), Expect = 0.0
Identities = 205/505 (40%), Positives = 277/505 (54%), Gaps = 57/505 (11%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW----DTDVV 140
+ +LFV E+AP++KTGGL DV+G LP ALAA GH V + P Y +D +
Sbjct: 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVEL 60
Query: 141 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
++L VG + V+ F GV F+D+P IYG DY DN RF
Sbjct: 61 VDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLF-----DRPGGIYGD----DYPDNAERF 111
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260
+ +AA E L + DVV A+DWHT+L+P LK +Y+P K
Sbjct: 112 AFFSRAAAELLSGLG----------WQPDVV-HAHDWHTALVPALLKAVYRPN----PIK 156
Query: 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320
VF IHN+AYQG F +DF L LP ++ + Y + +N++K GI+ +D V
Sbjct: 157 TVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-EFYGR------VNFLKGGIVYADRV 209
Query: 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDAST 378
TVSP YA+E+++ E G LD +++ K GI+NG+D + WNP TD Y+ Y A
Sbjct: 210 TTVSPTYAREILTPE-FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADD 268
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG 438
+ K KEALQ E+GLPVD ++P+ G I RL +QKG D+L AA+P ++ Q++VLG
Sbjct: 269 -LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLG 327
Query: 439 TGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
TG +E+ L +L YP R + ++ LAH+I AGADFIL+PSRFEPCGL QL+AMR
Sbjct: 328 TGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMR 387
Query: 499 YGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552
YGTVPIV TGGL DTV +G TGF + D A+ + RAL
Sbjct: 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFL----------FEEYDPGALLAALSRALRL 437
Query: 553 YGT--QALAEMMKNGMAQDLSWKVS 575
Y + KN M+QD SW S
Sbjct: 438 YRQDPSLWEALQKNAMSQDFSWDKS 462
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 449 bits (1158), Expect = e-154
Identities = 195/503 (38%), Positives = 253/503 (50%), Gaps = 63/503 (12%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTDVVIEL 143
+ ILFV +E AP KTGGLGDV+G LP ALAA GH V + P Y ++ D VV L
Sbjct: 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ V F H GV +D P + +G Y DN RF+
Sbjct: 61 DLFT----VLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFF 104
Query: 204 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 263
AA E L+ P D+V A+DWHT LIP LK Y Y K VF
Sbjct: 105 SWAAAEF--AEGLDPR-----P---DIVH-AHDWHTGLIPALLKEKYWR--GYPDIKTVF 151
Query: 264 CIHNIAYQGRFAFEDFGLLNLPAQ-FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322
IHN+AYQG F E G L LPA+ F G +I+++KAG+ +D V T
Sbjct: 152 TIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYG--------QISFLKAGLYYADRVTT 203
Query: 323 VSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVM 380
VSP YA+E+ + E G L+ ++R K GI+NG+D WNP TD + Y A +
Sbjct: 204 VSPTYAREITTPEF-GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADD-L 261
Query: 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG 440
+ K K ALQ GLP D + P+ + RL EQKG D++ A+P +++ Q+++LGTG
Sbjct: 262 EGKAENKRALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTG 320
Query: 441 KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG 500
+E+ L YP K ++ LAH I AGAD L+PSRFEPCGL QL+A+RYG
Sbjct: 321 DPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG 380
Query: 501 TVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
T+PIV TGGL DTV E TGF F D + + +RRAL Y
Sbjct: 381 TLPIVRRTGGLADTVIDYNPEDGEA-TGF---VF-------DDFNAEDLLRALRRALELY 429
Query: 554 GTQAL-AEMMKNGMAQDLSWKVS 575
L + + MAQD SW S
Sbjct: 430 RQPPLWRALQRQAMAQDFSWDKS 452
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 374 bits (963), Expect = e-124
Identities = 185/509 (36%), Positives = 251/509 (49%), Gaps = 62/509 (12%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW--DTDVVIEL 143
ILFV +E+ P+ KTGGL DV+G LP ALA G V + P Y + + W VV +
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 144 ---KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPR--TGEDYQDNQL 198
K G + + GVD +D+P + T Y DN
Sbjct: 62 GVLKGGRAQLFIVKEYGKDGGVDLYLIDNPAL------------FKRPDSTLYGYYDNAE 109
Query: 199 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258
RF+ AA E P D+V A+DW T L+P YLK + + Y
Sbjct: 110 RFAFFSLAAAEL-----APLGLISWLP---DIVH-AHDWQTGLLPAYLK--QRYRSGYI- 157
Query: 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318
VF IHN+AYQG F + L LP + +SF Y + I+++K G+ +D
Sbjct: 158 IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-FYGQ------ISFLKGGLYYAD 210
Query: 319 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDA 376
V TVSP YA E+ + + G L+ ++ K GI+NG+D WNP TD YI Y A
Sbjct: 211 AVTTVSPTYAGEIYT-PEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSA 269
Query: 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV 436
+ AK K ALQ +GL VD P+ GF+ RL QKG D+L AI +++ Q+++
Sbjct: 270 EV-LPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVL 328
Query: 437 LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 496
LGTG +E+ L L +P + V ++ PLAH+I AGAD IL+PSRFEPCGL QL+A
Sbjct: 329 LGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYA 388
Query: 497 MRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
MRYGT+PIV TGGL DTV + TGF + ++ +RR
Sbjct: 389 MRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFL----------FLQTNPDHLANALRR 438
Query: 549 ALATYGTQALA--EMMKNGMAQDLSWKVS 575
AL Y L ++ N M D SW +S
Sbjct: 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLS 467
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 2e-94
Identities = 180/512 (35%), Positives = 256/512 (50%), Gaps = 72/512 (14%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
L +L V +E+ P KTGGL DV G LP AL A+G V T+ P Y V+ ++
Sbjct: 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY--------PAVLAGIE 55
Query: 145 VGDKIEKVR-FFHCHKR-------GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
+++ F R G+D +D P ++ + + GP G+D+ DN
Sbjct: 56 DAEQVHSFPDLFGGPARLLAARAGGLDLFVLDAP----HLYDRPGNPYVGP-DGKDWPDN 110
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMY 256
RF+ L +AA + L + D+V A+DW L P YL +P
Sbjct: 111 AQRFAALARAAAAIGQGL--------VPGFVPDIVH-AHDWQAGLAPAYLHYSGRPA--- 158
Query: 257 KSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDG---YNKPVRGRKINWMKAG 313
VF IHN+A+QG+F E G L LP S+F +DG Y I ++KAG
Sbjct: 159 --PGTVFTIHNLAFQGQFPRELLGALGLPP---SAFS-LDGVEYYGG------IGYLKAG 206
Query: 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG 371
+ +D + TVSP YA E + G + G+ LD ++R+ + GI+NG+D WNP TD+ I
Sbjct: 207 LQLADRITTVSPTYALE-IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIA 265
Query: 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 431
YD T + A+ K ALQA GL D + ++G I RL QKG D+L A+P + E
Sbjct: 266 ATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEG 324
Query: 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL 491
Q+ +LG+G +E + YP + V ++ LAH+I AGAD +L+PSRFEPCGL
Sbjct: 325 AQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGL 384
Query: 492 IQLHAMRYGTVPIVASTGGLVDTV----EEGF-----TGFQMGSFSVDCEAVDPVDVAAV 542
QL A+RYG VP+VA GGL DTV E TG Q PV A+
Sbjct: 385 TQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS----------PVTADAL 434
Query: 543 STTVRRALATYGTQAL-AEMMKNGMAQDLSWK 573
+ +R+ A + + +NGM D+SW+
Sbjct: 435 AAALRKTAALFADPVAWRRLQRNGMTTDVSWR 466
|
Length = 485 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 4e-82
Identities = 101/261 (38%), Positives = 136/261 (52%), Gaps = 27/261 (10%)
Query: 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146
ILFV +E AP++KTGGL DV+G LP ALA GH V I PRY + + ++
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVI-ELY 59
Query: 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQA 206
V GVD F+D+P + + IYG G DY+DN RF+ +A
Sbjct: 60 VLFGYVGVARLELDGVDVYFLDNPEYFDR------PGIYGD-AGRDYEDNAERFAFFSRA 112
Query: 207 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIH 266
ALE R L + D++ +DWHT L+P YLK Y +K+ K VF IH
Sbjct: 113 ALELLRKLG----------WKPDII-HCHDWHTGLVPAYLKEAYADDPFFKNIKTVFTIH 161
Query: 267 NIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326
N+AYQG F + LL LP IDG +IN++KAGI+ +D V TVSP
Sbjct: 162 NLAYQGVFPADLLDLLGLPW----EDFSIDGLEFY---GQINFLKAGIVYADAVTTVSPT 214
Query: 327 YAQELVSGEDKGVELDNIIRK 347
YA+E+++ E G LD ++RK
Sbjct: 215 YAEEILTPEF-GEGLDGLLRK 234
|
Length = 234 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 5e-74
Identities = 112/348 (32%), Positives = 187/348 (53%), Gaps = 27/348 (7%)
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
+DW+ L+P LKT+Y +K K V IHN+ QG F+ F L LP + S
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH- 205
Query: 295 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKG 352
G ++N + G+ +D++ T SP YA+E+ ++ LD ++ RK + G
Sbjct: 206 -------REGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHG 258
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I+NG+D ++WNP TDK I +Y +D K K+AL EVGLP D P++G I +
Sbjct: 259 ILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLEEVGLPFDEETPLVGVIINFD 317
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
+ +G+++LA ++ ++ ++Q+++ G+G K EK+ + +PE+ +F H+
Sbjct: 318 DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFS 528
IAG D +L+P + E CG++Q+ AM YGT+P+ + GG+V+T+EE +GF ++
Sbjct: 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT 437
Query: 529 VDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKVS 575
+ A+ + ALA Y + E++ M +D SWK S
Sbjct: 438 PE----------ALVAKLGEALALYHDEERWEELVLEAMERDFSWKNS 475
|
Length = 489 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 221 bits (565), Expect = 2e-62
Identities = 167/529 (31%), Positives = 257/529 (48%), Gaps = 76/529 (14%)
Query: 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD--QYKDAWDT---D 138
GL+I+ + E+AP +K GGL DV+ GL AL GH V + P+YD QY + D
Sbjct: 481 GLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLD 540
Query: 139 VVIELKVGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDN 196
VV+E + K + + G+ F++ HP +K + + Q YG D+
Sbjct: 541 VVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP---SKFFWRAQ--YYGE------HDD 589
Query: 197 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI-PCYLKTMYKPKGM 255
RFS +AALE L S K D++ +DW T+ + P Y +Y PKG
Sbjct: 590 FKRFSYFSRAALE----LLYQSGKKP------DIIH-CHDWQTAFVAPLYWD-LYAPKG- 636
Query: 256 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-----KINWM 310
+ SA++ F HN YQG D L + ++P R + +IN +
Sbjct: 637 FNSARICFTCHNFEYQGTAPASDLASCGLD---------VHQLDRPDRMQDNAHGRINVV 687
Query: 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYI 370
K I+ S++V TVSP YAQE+ S +G++ GI+NG+D WNP TD+++
Sbjct: 688 KGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFL 747
Query: 371 GVKYDASTVMDAKPLLKEALQAEVGLP-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 429
V+Y+A+ + K K AL+ ++GL D + P++G I RL QKG ++ AI +
Sbjct: 748 KVQYNAND-LQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE 806
Query: 430 ENVQIIVLGTGKKP-MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPSRF 486
Q ++LG+ P ++++ E + + R + K++ L+H I A +D +IPS F
Sbjct: 807 LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMF 866
Query: 487 EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP---------- 536
EPCGL Q+ AMRYG+VPIV TGGL D+V F D E +
Sbjct: 867 EPCGLTQMIAMRYGSVPIVRKTGGLNDSV-----------FDFDDETIPVELRNGFTFLT 915
Query: 537 VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKVSIGTVQEED 583
D +++ + RA Y + ++++ M D SW S Q E+
Sbjct: 916 PDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSS--ASQYEE 962
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 207 bits (527), Expect = 4e-57
Identities = 153/519 (29%), Positives = 231/519 (44%), Gaps = 117/519 (22%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
++I+ + E+AP +K GGLGDV+ L A+ H V I P+YD + D+ +
Sbjct: 588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRS 647
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSL 202
+++ + G+ F++ + F A +YG R ++ RF
Sbjct: 648 YSWGGTEIKVWFGKVEGLSVYFLEPQNGMFWAGC-------VYGCR------NDGERFGF 694
Query: 203 LCQAALE-------APRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM 255
C AALE P I++ +DW ++ + K Y G+
Sbjct: 695 FCHAALEFLLQSGFHPDIIH------------------CHDWSSAPVAWLFKDHYAHYGL 736
Query: 256 YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315
K A+VVF IHN+ +FG N + +
Sbjct: 737 SK-ARVVFTIHNL---------EFG--------------------------ANHIGKAMA 760
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG-IKGIVNGMDVQEWNPLTDKYIGVKY 374
+D TVSP Y++E VSG I GI+NG+D W+P D +I V Y
Sbjct: 761 YADKATTVSPTYSRE-VSGNSA------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPY 813
Query: 375 DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI 434
+ V++ K KEALQ +GL ++P++G I RL QKG ++ AI ++ N Q+
Sbjct: 814 TSENVVEGKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQV 872
Query: 435 IVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPC 489
++LG+ P + QL + ++AR ++ PL+H+I AGADFIL+PS FEPC
Sbjct: 873 VLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPC 932
Query: 490 GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-------CEAVDP------ 536
GL QL AMRYG++P+V TGGL DTV F VD + ++P
Sbjct: 933 GLTQLTAMRYGSIPVVRKTGGLFDTV-----------FDVDHDKERAQAQGLEPNGFSFD 981
Query: 537 -VDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSW 572
D A V + RA++ + G + K M QD SW
Sbjct: 982 GADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSW 1020
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 84/358 (23%), Positives = 134/358 (37%), Gaps = 96/358 (26%)
Query: 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF 288
DVV A+DW L + +V +H +
Sbjct: 87 DVV-HAHDWLALLAAALAARLLG-------IPLVLTVHGLE------------------- 119
Query: 289 KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT 348
F + + + +D ++ VS +EL E GV + I
Sbjct: 120 ---FGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR--ELGGVPPEKITV-- 172
Query: 349 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFI 408
I NG+D + + P A + +G+P D PVI F+
Sbjct: 173 ----IPNGVDTERFRPAPR---------------------AARRRLGIPEDE--PVILFV 205
Query: 409 GRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 465
GRL +KG D+L A+ KE +V+++++G G P+ ++LE L G+
Sbjct: 206 GRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG--PLREELEALA-----AELGLGDRV 258
Query: 466 ----NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEG 518
+P + A AD ++PS +E GL+ L AM G P+VAS GG+ + VE+G
Sbjct: 259 TFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIPEVVEDG 317
Query: 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNG---MAQDLSW 572
TG V P D A++ + R L L + + +A+ SW
Sbjct: 318 ETGL----------LVPPGDPEALAEAILRLLD---DPELRRRLGEAARERVAERFSW 362
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 62/267 (23%)
Query: 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355
D P + ++ + +D V+ VS A EL + I + I N
Sbjct: 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKA---------LGIDPEKVTVIPN 178
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQK 415
G+D + ++P A ++GLP D+ VI F+GRL +K
Sbjct: 179 GVDTERFSPA---------------------DRAEARKLGLPEDK--KVILFVGRLVPRK 215
Query: 416 GSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-------- 465
G D L A+ +K+ +V ++++G G P+ + LE L G+
Sbjct: 216 GIDYLIEALARLLKKRPDVHLVIVGDG--PLREALEAL-----AAELGLEDRVTFLGAVP 268
Query: 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQM 524
+ + A AD ++PS E GL+ L AM G P+VA+ GG+ + + +G G
Sbjct: 269 HEEVP-AYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIPEIITDGENGLL- 325
Query: 525 GSFSVDCEAVDPVDVAAVSTTVRRALA 551
V P D A++ + R LA
Sbjct: 326 ---------VPPGDPEALAEAILRLLA 343
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 5e-14
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462
P+I F+GRL +KG D+L A +++ + ++ G EK+L++L + + +
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVI 62
Query: 463 AKFNIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 520
+P +I AD ++PSR+E GL+ L AM G I GG + V++G T
Sbjct: 63 FVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDGET 122
Query: 521 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
G VDP D A++ + + L
Sbjct: 123 GL----------LVDPGDAEALAEAIEKLLK 143
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 7e-13
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQ---IIVLGTGKKP 443
EA +A + D+ P I +GRL+ +KG D L A + + +IV G
Sbjct: 207 AEARRARLLRDPDK--PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDI 264
Query: 444 MEKQLEQLEILYPEKARGVA-KFNIPLAH------MIIAGADFILIPSRFEPCGLIQLHA 496
+ E+L L + GV + + P + AD + P+ +EP GL L A
Sbjct: 265 LAMDEEELREL--ARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEA 322
Query: 497 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
M G P+VA+ GG D V +G TG VDP D A++ +RR L
Sbjct: 323 MACGL-PVVATAVGGPRDIVVDGVTGL----------LVDPRDPEALAAALRRLLT 367
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 70.0 bits (170), Expect = 8e-13
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQ 450
+GL + V+ ++GRL+ +KG D+L A K +++++++G G + E+ +
Sbjct: 190 RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKL 249
Query: 451 LEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 506
+ L E KF + ++A AD ++PS E GL+ L AM GT I +
Sbjct: 250 AKKLGLED---NVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 507 STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNG 565
GG+ + VE+G TG V P DV ++ + + L + L E +
Sbjct: 307 DVGGIPEVVEDGETGL----------LVPPGDVEELADALEQLLEDPELREELGEAARER 356
Query: 566 MAQDLSWKV 574
+ ++ SW+
Sbjct: 357 VEEEFSWER 365
|
Length = 381 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 6e-12
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 338 GVELDNIIRKTGIK------GIVNGM--DVQEWNP-LTDKYIGVKYDASTVMDAKPLLKE 388
G +L + KT I+ + GM D+ ++ P L + + V Y+ + KP
Sbjct: 130 GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGN 189
Query: 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL 448
+ G +DR+ P I F+GR+ QKG L A+ H+I ++VQ+ VL G +
Sbjct: 190 VVLDRYG--IDRSRPYILFVGRITRQKGVPHLLDAV-HYIPKDVQV-VLCAGAPDTPEVA 245
Query: 449 EQLEILYPEKAR---GVAKFN----IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501
E++ R G+ N +++ A+ + PS +EP G++ L AM GT
Sbjct: 246 EEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT 305
Query: 502 VPIVAS-TGGLVDTVEEGFTGF 522
P+VAS TGG+ + V +G TGF
Sbjct: 306 -PVVASATGGIPEVVVDGETGF 326
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 1e-11
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 407 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF- 465
F+GRL +KG D L A + + ++ G P + LE+L R V
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDR-VIFLG 167
Query: 466 ---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
L +++A AD ++PS E GL+ L AM G I GG + VE+G TG
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 8e-10
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 40/196 (20%)
Query: 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGK 441
++ + + L + + PVI +GRL QKG D L A KE + ++++LG G
Sbjct: 171 EEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDG- 229
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILIPSRFEPC 489
P+ ++LE L + + P ++ AD ++ SR+E
Sbjct: 230 -PLREELEAL----------AKELGLADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGF 276
Query: 490 GLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
+ L AM GT P+VA+ G + +E+G G V D AA++
Sbjct: 277 PNVLLEAMALGT-PVVATDCPGPREILEDGENGL----------LVPVGDEAALAAAALA 325
Query: 549 ALATYGTQALAEMMKN 564
L L E +
Sbjct: 326 LLDLLLDPELRERLAA 341
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLG--TGK 441
+ L+ ++ + D V+ + GR+ KG +L A N++++V+G T
Sbjct: 179 PQPNLRQQLNISPDET--VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTAS 236
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------------ADFILIPSRF-E 487
EK Q ++L K G I+ G AD +++PS+ E
Sbjct: 237 SKGEKAAYQKKVLEAAKRIG--------DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEE 288
Query: 488 PCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546
++ + AM G P++AST GG+ + V EG TG+ + +P+ ++ + +
Sbjct: 289 AFCMVAVEAMAAGK-PVLASTKGGITEFVLEGITGYHLA---------EPMTSDSIISDI 338
Query: 547 RRALATYGTQALAEMMKNGMAQDLSW 572
R LA +AE K+ + SW
Sbjct: 339 NRTLADPELTQIAEQAKDFVFSKYSW 364
|
Length = 380 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 4e-09
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 39/182 (21%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461
PV+ ++GRL +K + L A + V+++++G G P +LE YP
Sbjct: 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG--PARARLEAR---YPN---- 248
Query: 462 VAKFNIPLAH----MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVE 516
F L A AD + PSR E GL+ L AM G +P+VA GG D V
Sbjct: 249 -VHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAGGPADIVT 306
Query: 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKNGMAQDL 570
+G G V+P D A + + LA +A AE A+
Sbjct: 307 DGENGL----------LVEPGDAEAFAAALAALLADPELRRRMAARARAE------AERR 350
Query: 571 SW 572
SW
Sbjct: 351 SW 352
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 19/136 (13%)
Query: 397 PVDRNIPVIGFIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL 454
P+ + PV F+ RL + KG D L AA I NV+++++G G + + ++E L
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242
Query: 455 YPEKARGVAKF-----NIPLAHMIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVAS 507
G +F ++P ++A AD ++PS E P L++ AM G P++A+
Sbjct: 243 ---GLEGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLE--AMAMG-RPVIAT 293
Query: 508 -TGGLVDTVEEGFTGF 522
G + V +G GF
Sbjct: 294 DVPGCREAVIDGVNGF 309
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----NVQIIVLGTGKKPMEK 446
+A +GLP+D V+ F+GR++ K D+L A+ + N+++IV+G
Sbjct: 210 RARLGLPLDT--KVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLA 267
Query: 447 QLEQLEILYPEKARGVAK---FNIP-----LAHMIIAGADFILIPSRFEPCGLIQLHAMR 498
+ L L E G+A F P L H+ A AD + +PS E GL+ + A
Sbjct: 268 TPDALIELAAE--LGIADRVRFLPPRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQA 324
Query: 499 YGTVPIVASTGGLVDTVEEGFTGF 522
GT + A GGL V +G TG
Sbjct: 325 CGTPVVAARVGGLPVAVADGETGL 348
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 7e-08
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 463
GFIG+L KG D+L A + +++++++G G + E+ +LE + G
Sbjct: 193 RFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESY-ELEGDPRVEFLGAY 251
Query: 464 KFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
A D +++PS + E L+ A+ G I + GG+ + V +G G
Sbjct: 252 PQEEIDDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
Query: 523 QMGSFSVDCEAVDPVDVAAV 542
F D D+AA
Sbjct: 310 ---LFPPG----DAEDLAAA 322
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 7e-08
Identities = 44/176 (25%), Positives = 67/176 (38%), Gaps = 39/176 (22%)
Query: 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL---AAAIPHFIKENVQIIVL 437
D + E P F+GRL KG D+L AAA+P + ++++
Sbjct: 170 DPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-----DAPLVIV 224
Query: 438 GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI--------IAGADFILIPS--RFE 487
G G P+E +LE L G+ + + +A D + PS R E
Sbjct: 225 GEG--PLEAELEALAAAL-----GLLD-RVRFLGRLDDEEKAALLAACDVFVFPSVERSE 276
Query: 488 PCGLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541
G++ L AM +G P++++ G G TG V P D AA
Sbjct: 277 AFGIVLLEAMAFG-KPVISTEIGTGGSYVNLHGVTGL----------VVPPGDPAA 321
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460
PV+ ++GRL ++K D L A +KE +V+++++G G P ++LE+L +
Sbjct: 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG--PEREELEEL-----AREL 255
Query: 461 GVAKF----------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STG 509
G+A +P + AD + S E GL+ L AM G P+VA
Sbjct: 256 GLADRVIFTGFVPREELPDYY---KAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP 311
Query: 510 GLVDTVEEGFTGF 522
GL D V +G GF
Sbjct: 312 GLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I NG+D + P K ++ L GLP D+ I + G +G +
Sbjct: 164 IPNGIDTTIFRPR----------------DKREARKRL----GLPADKKIILFGAVGGTD 203
Query: 413 EQKGSDILAAA---IPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--I 467
+KG D L A + K++++++V G + L P + N
Sbjct: 204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDL-------PFPVHYLGSLNDDE 256
Query: 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGS 526
LA +I + AD ++PS E + A+ GT P+VA GG+ D V+ G TG+
Sbjct: 257 SLA-LIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDHGVTGY---- 310
Query: 527 FSVDCEAVDPVDVAAVSTTVRRALA 551
P D ++ + LA
Sbjct: 311 ------LAKPGDPEDLAEGIEWLLA 329
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 45/170 (26%)
Query: 407 FIGRLEEQKGSDIL--AAAIPHFIKENVQIIVLGTGKKPMEKQLEQL--------EILYP 456
+GRL QKG D+L A A + ++ ++G G P + LE L ++
Sbjct: 183 AVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG--PEREALEALIKELGLEDRVILL 240
Query: 457 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS--TGGLVDT 514
+ + ++ A A ++ SRFE ++ L AM +G +P+++ G +
Sbjct: 241 GFTKNIEEY--------YAKASIFVLTSRFEGFPMVLLEAMAFG-LPVISFDCPTGPSEI 291
Query: 515 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 564
+E+G G V DV ALA +AL +M++
Sbjct: 292 IEDGVNGL----------LVPNGDVE--------ALA----EALLRLMED 319
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQL--EILYPEK 458
P I F+GR E+KG +L A + V+++++G G P+ LE L + +
Sbjct: 189 PRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDG--PLLAALEALARALGLGGR 246
Query: 459 AR--GVAKFNIPLAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS-TG 509
G M A L PS P ++ L A G VP+VA+ G
Sbjct: 247 VTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-VPVVATRHG 303
Query: 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562
G+ + VE+G TG V DVAA++ + R LA L M
Sbjct: 304 GIPEAVEDGETGL----------LVPEGDVAALAAALGRLLA---DPDLRARM 343
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-06
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKP 443
+ P+ + +I F+GRL +KG D+L A + + +++ G +
Sbjct: 188 LPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAE-RFPDWHLVIAGPDEGG 246
Query: 444 MEKQLEQLEILYPEKARGVAK---FNIPLAHMIIAG----ADFILIPSRFEPCGLIQLHA 496
+L+Q+ A G+ F L A AD ++PS E G++ A
Sbjct: 247 YRAELKQI-----AAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEA 301
Query: 497 MRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 554
+ GT P+V + + +E G C V DV A++ +RRAL
Sbjct: 302 LACGT-PVVTTDKVPWQELIEYG------------CGWVVDDDVDALAAALRRALELPQR 348
Query: 555 TQALAEMMKNGMAQDLSWKV 574
+A+ E + + + SW
Sbjct: 349 LKAMGENGRALVEERFSWTA 368
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460
+I F+GRL+E KG D L A +K+ N +++++G G Y +
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGD-------------YSRYLQ 274
Query: 461 GVAKFNIPLAHMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507
K + + G AD ++PS E C + + M +G +P++ +
Sbjct: 275 ECKKI---WSKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHG-LPLIGT 330
Query: 508 TG-GLVDTVEEGFTG 521
T GL + +E+G G
Sbjct: 331 TSTGLSEMIEDGLNG 345
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKE---NVQIIVLGTGKKPMEKQLEQLEIL-YP 456
I IG G G L +++ +V++ ++G+G + + + + L +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFV 60
Query: 457 EKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTV 515
E + +A AD L P RF L L A+ G P+VA+ G
Sbjct: 61 EDLAAL-----------LASADVALAPLRFGAGSPLKLLEALAAGL-PVVATDIGAEGLP 108
Query: 516 EEGFTGF 522
E+ G
Sbjct: 109 EDLGWGV 115
|
Length = 134 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 43/221 (19%)
Query: 353 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
I NG+D + ++P D + L+ E+GLP + +IG + RL
Sbjct: 164 IPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFLIGIVARLH 203
Query: 413 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472
QK L A +K+ +L G P LE L + + +
Sbjct: 204 PQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKE-LGLEDKVILLGERSDV 262
Query: 473 --IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 529
++ D ++ S E + L AM G +P+VA+ G + V + TGF
Sbjct: 263 PALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVGDNAELVGD--TGF------- 312
Query: 530 DCEAVDPVDVAAVSTTVRRALA------TYGTQALAEMMKN 564
V P D A++ + LA G A + +N
Sbjct: 313 ---LVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 56/222 (25%)
Query: 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGV 372
I +SD V VS +E EL +I + I+ I N +D +
Sbjct: 141 SIEKSDGVTAVSESLKEETY-------ELFDIDKP--IEVIPNFVDTDRY---------- 181
Query: 373 KYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI---GF--IGRLEEQKGSDILAAAIPHF 427
+ AL+ ++G P D + +I F + R+E D++ +
Sbjct: 182 ----------RRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVE-----DVIE--VFAR 223
Query: 428 IKENV--QIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGADFIL 481
+++ V +++++G G + P E+ + +L + F +++ +D L
Sbjct: 224 VQQEVPAKLLLVGDGPERSPAEQLVRELGL------TDRVLFLGKQDDVAELLSISDLFL 277
Query: 482 IPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 522
+PS E GL L AM G VP++AS GG+ + VE G TGF
Sbjct: 278 LPSEKESFGLAALEAMACG-VPVIASNAGGIPEVVEHGVTGF 318
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 9e-05
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Query: 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIV 436
V D E+L+A GL PV+ G L KG ++L A+P + + +V+++V
Sbjct: 165 VPDPPAEPPESLKALGGLD---GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLV 221
Query: 437 LGTGKKPMEKQLEQLEILYPEKAR-GVAK---FN---IPLA--HMIIAGADFILIPSRFE 487
G + Y R G+A F +P + + AD +++P R
Sbjct: 222 AG---ETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSA 278
Query: 488 PC---GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544
G++ A+ +G P++++ G + V +G TG V P D AA++
Sbjct: 279 DQTQSGVLAY-AIGFG-KPVISTPVGHAEEVLDGGTGL----------LVPPGDPAALAE 326
Query: 545 TVRRALATYGTQALAEMMKNG--MAQDLSWKV 574
+RR LA + + A+ +SW+
Sbjct: 327 AIRRLLADP--ELAQALRARAREYARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 522
+++ AD L+PS E GL L AM G + ++ GG+ + V+ G TGF
Sbjct: 267 LLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGF 316
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 59/371 (15%), Positives = 114/371 (30%), Gaps = 86/371 (23%)
Query: 153 RFFHCHKRGVDRVFVDHPWFLAKVWGKTQSK-IYGPRTGEDYQDNQLRFSLLCQAALEAP 211
G+ R + L + K + + G + L
Sbjct: 8 FLASRRPTGIGRYARE----LLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPR 63
Query: 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271
R+L +G ++ + H P + + +G VV IH++
Sbjct: 64 RLLWGLLFLLRAGDRLLLLLLGLDLLH---SPHNTAPLLRLRG----VPVVVTIHDLIP- 115
Query: 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL 331
F + ++ R ++ + +D ++TVS ++L
Sbjct: 116 --------------------LRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155
Query: 332 VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM------DAKPL 385
+ +Y+GV D V+ +P
Sbjct: 156 L-----------------------------------RYLGVPPDKIVVIPLGVDPRFRPP 180
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKP 443
EA + R P ++G +E +K + L A + + +++++G
Sbjct: 181 PAEAEVLRALYLLPR--PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWL 238
Query: 444 MEKQLEQLEILYPEKARGVAKF--NIPLAHM--IIAGADFILIPSRFEPCGLIQLHAMRY 499
E+ L +L L +F + + + GA + PS +E GL L AM
Sbjct: 239 NEELLARLREL---GLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMAC 295
Query: 500 GTVPIVASTGG 510
GT P++AS
Sbjct: 296 GT-PVIASNIS 305
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 6e-04
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 43/197 (21%)
Query: 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPM 444
E P + ++ +GRL E+KG D L A+ + IV G G P+
Sbjct: 166 ERFPPRPPPPPGEPLRIL-SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDG--PL 221
Query: 445 EKQLEQLEILYPEKARGVAKFNIPL-----AHMIIA---GAD-FILIPSRFEPCGLIQ-- 493
+LE L G+ + L + AD F+L PS G +
Sbjct: 222 RDELEAL-----IAELGLED-RVTLLGAKSQEEVRELLRAADLFVL-PSVTAADGDREGL 274
Query: 494 ----LHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548
+ AM G +P++++ G+ + VE+G TG V P D A++ + R
Sbjct: 275 PVVLMEAMAMG-LPVISTDVSGIPELVEDGETGL----------LVPPGDPEALADAIER 323
Query: 549 ALATYGTQALAEMMKNG 565
L + EM + G
Sbjct: 324 LLDD--PELRREMGEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 26/133 (19%)
Query: 404 VIGFIGRLEEQKGSDILAAAIPHF------IKENVQIIVLGTGKKPMEKQLEQLEILYPE 457
V+G +GRL+ K L A E ++++++G G P EQ+
Sbjct: 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PARGACEQMV----- 248
Query: 458 KARGVA--------KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-T 508
+A G+A + ++P ++ D ++PS E L AM G +P++A+
Sbjct: 249 RAAGLAHLVWLPGERDDVP---ALMQALDLFVLPSLAEGISNTILEAMASG-LPVIATAV 304
Query: 509 GGLVDTVEEGFTG 521
GG + V+ G TG
Sbjct: 305 GGNPELVQHGVTG 317
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 0.001
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQ 450
D + I I RL +KG D+L IP K NV+ I+ G G P LE+
Sbjct: 190 DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDG--PKRILLEE 241
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.002
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 43/195 (22%)
Query: 403 PVIGFIGRLEEQKGSDILA---AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459
P+I ++GRL +K D L +P ++ +G G P ++LE++
Sbjct: 264 PLIVYVGRLGAEKNLDFLKRVMERLP-----GARLAFVGDG--PYREELEKM-------- 308
Query: 460 RGVAKFNIPLAHMI--------IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG 510
A M+ A D ++PS E G + L AM G VP+VA+ GG
Sbjct: 309 --FAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG 365
Query: 511 LVDTV---EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA 567
+ D + +EG TGF VD + V+ ++ +R G A E+ K
Sbjct: 366 IPDIIPPDQEGKTGFLYTPGDVD-DCVEKLETLLADPELR---ERMGAAAREEVEKWD-- 419
Query: 568 QDLSWKVSIGTVQEE 582
W+ + ++ E
Sbjct: 420 ----WRAATRKLRNE 430
|
Length = 465 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.003
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD--ILAAAIPHFIKE---NVQIIVLGTGK 441
+ L P+ + PVI GRL KG + I A A +K+ +V ++++G +
Sbjct: 170 ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR---LKKDDPDVHLLIVGDAQ 226
Query: 442 KPMEKQLEQLEILYPEKARGVAKF-----NIPLAHMIIAGADFILIPS-RFEPCGLIQLH 495
E LE++ + F ++P A+ + AD ++ S E G +
Sbjct: 227 GRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYAL---ADIVVSASTEPEAFGRTAVE 283
Query: 496 AMRYGTVPIVASTGGLVDTVEEGFTGF 522
A G I + GG +TV G TG
Sbjct: 284 AQAMGRPVIASDHGGARETVRPGETGL 310
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|222577 pfam14172, DUF4309, Domain of unknown function (DUF4309) | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 17/89 (19%)
Query: 120 RVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG- 178
+A +D Y ++ G +I ++R F + G+ + K G
Sbjct: 38 SPDYVANAFDLYATYMGPNLAFGYNKGGQIFEIRSFDTNLEGI------TLKEIKKQLGE 91
Query: 179 -------KTQSKIYGPRTGEDYQDNQLRF 200
KT KIY + G+DY +L F
Sbjct: 92 PDSVVTTKTDEKIYVYKVGKDY---ELLF 117
|
This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homologue of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length. Length = 133 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 586 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.98 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.94 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.92 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.9 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.9 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.9 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.89 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.88 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.86 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.85 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.81 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.8 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.79 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.79 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.78 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.77 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.73 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.73 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.67 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.62 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.59 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.49 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.44 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.44 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.42 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.35 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.33 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.26 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.23 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.22 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.19 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.18 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.12 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.0 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 98.9 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 98.89 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.86 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.85 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 98.75 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.74 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.73 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.7 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.61 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.56 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.55 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.53 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.47 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.4 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.37 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.36 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.32 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.15 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.01 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.0 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.93 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.75 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.58 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.5 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.43 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.33 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.18 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.16 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.07 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.01 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 97.01 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 96.94 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.91 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 96.9 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.7 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.39 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.26 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 95.81 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.77 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 95.37 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 94.81 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 93.18 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 92.59 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 92.55 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 91.92 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 90.94 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 90.8 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 90.57 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 90.38 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 89.61 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 89.42 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 89.19 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 88.75 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 88.21 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 88.07 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 87.21 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 86.11 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 85.53 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 84.72 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 84.2 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 84.04 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.71 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 83.5 | |
| PLN02208 | 442 | glycosyltransferase family protein | 83.13 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 83.04 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 82.34 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 82.18 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 81.58 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 80.42 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 80.18 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-68 Score=594.00 Aligned_cols=462 Identities=33% Similarity=0.564 Sum_probs=389.1
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCc-----ceEEEEEeCCeeeEEEEEE
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-----DVVIELKVGDKIEKVRFFH 156 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (586)
.++|||+||++++.|+.++||++++++.|+++|+++||+|.||+|.|+.....+.. .......+++.....++++
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 56899999999999999999999999999999999999999999999865422111 1122223443344577888
Q ss_pred EEeCCceEEEEcC--c-cccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEE
Q 007873 157 CHKRGVDRVFVDH--P-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 233 (586)
Q Consensus 157 ~~~~gv~~~~v~~--~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~ 233 (586)
...+||+++|++. | .|+.+ ..+|+ +.|+..||.+||+++++++..+++ +|| |||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-IIH 615 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-IIH 615 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EEE
Confidence 8889999999984 3 26665 57886 789999999999999999987753 699 999
Q ss_pred ecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHH
Q 007873 234 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 313 (586)
Q Consensus 234 ~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (586)
+|||++++++.++...+...+ +.++|+|+||||+.|||.|+...+..++++....... ++.... +...+++++.+
T Consensus 616 ~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~G 690 (977)
T PLN02939 616 CHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKGA 690 (977)
T ss_pred ECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHHH
Confidence 999999998554444454444 4689999999999999999888888888887664322 121111 23468999999
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhh--ccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (586)
+..||.|+|||+.+++++.. .+|..++.+++ ..++.+|+||+|++.|+|.++++|..+|++.++ +.|..++.+++
T Consensus 691 Iv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLR 767 (977)
T PLN02939 691 IVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAALR 767 (977)
T ss_pred HHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHHH
Confidence 99999999999999999986 46666666654 469999999999999999999999999999986 68999999999
Q ss_pred HHhCCCCC-CCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHHCC--CceEEEeccCh
Q 007873 392 AEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFNI 467 (586)
Q Consensus 392 ~~~gl~~~-~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (586)
+++|++.+ ++.|+|+|+||+.++||++.|++|+..+.+++++|+|+|+|+ ..+++.+++++.+++ +++.+.+.++.
T Consensus 768 kelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de 847 (977)
T PLN02939 768 KQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDE 847 (977)
T ss_pred HHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCH
Confidence 99999864 567999999999999999999999998877789999999996 456788888888875 46888888998
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc---------CcceEEEccccccccCCCCCC
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPVD 538 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~~~~~~~~~~~~v~~~d 538 (586)
...+.+|++||++|+||++|+||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.|
T Consensus 848 ~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~D 917 (977)
T PLN02939 848 ALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTPD 917 (977)
T ss_pred HHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCCC
Confidence 88899999999999999999999999999999999999999999999975 5799998 9999
Q ss_pred HHHHHHHHHHHHHhc--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 539 VAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 539 ~~~la~~I~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
+++|+++|.+++..+ .++.+++|+++++.++|||+.++++|++.+.
T Consensus 918 ~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~ 965 (977)
T PLN02939 918 EQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQ 965 (977)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 999999999998732 2788999999999999999999999998653
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-67 Score=570.36 Aligned_cols=459 Identities=38% Similarity=0.623 Sum_probs=383.7
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcce-EEEEE--eCCeeeEEEEEEEE
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELK--VGDKIEKVRFFHCH 158 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~ 158 (586)
|++|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|++..+...... ...+. .+. ..++++..
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 77 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGG---PARLLAAR 77 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCc---eEEEEEEE
Confidence 5789999999999999999999999999999999999999999999988754332221 12222 222 45677788
Q ss_pred eCCceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCc
Q 007873 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238 (586)
Q Consensus 159 ~~gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~ 238 (586)
.+|++++++++|.|+.| ...+|+...|.||.||.+||.+||++++++++.+.. .++|| |||+|||+
T Consensus 78 ~~~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~ 143 (485)
T PRK14099 78 AGGLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQ 143 (485)
T ss_pred eCCceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcH
Confidence 89999999999999886 134898878889999999999999999998876521 14799 99999999
Q ss_pred cchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCC
Q 007873 239 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318 (586)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 318 (586)
++++|.+++...+ .++|+|+|+||+.+|+.|+...+..++++..+... ++.. +...+++++.++..||
T Consensus 144 ~~l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 144 AGLAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLAD 211 (485)
T ss_pred HHHHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcC
Confidence 9999998874321 47899999999999999887777777777655331 1110 1234578999999999
Q ss_pred EEEEeCHHHHHHHhcCccCCCcchhhhh--ccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCC
Q 007873 319 MVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (586)
Q Consensus 319 ~vitvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 396 (586)
.|+|+|+.+++++.. ..+|..++.+++ ..++.+|+||+|++.|+|.+++++..+|+..++ +.+..++..+++++|+
T Consensus 212 ~vitVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 212 RITTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGL 289 (485)
T ss_pred eeeecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCC
Confidence 999999999999985 234555444443 358999999999999999999899999998875 6777888999999999
Q ss_pred CCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 397 ~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
+.+++.++|+++||+.++||++.|++|++.+.+.+++|+|+|+|+..+++.++++..++++++.....++.+..+.++++
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~ 369 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAG 369 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhc
Confidence 87667799999999999999999999999997778999999999877888999998888777755666766666555678
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC---------cceEEEccccccccCCCCCCHHHHHHHHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~I~ 547 (586)
||++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.
T Consensus 370 aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~ 439 (485)
T PRK14099 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALR 439 (485)
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999875 689998 9999999999999
Q ss_pred H---HHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 007873 548 R---ALATYGTQALAEMMKNGMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 548 ~---ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (586)
+ ++++ ++.+++|++++++++|||+.++++|++.+
T Consensus 440 ~a~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY 476 (485)
T PRK14099 440 KTAALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALY 476 (485)
T ss_pred HHHHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHH
Confidence 8 4555 78899999999999999999999999865
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-66 Score=566.06 Aligned_cols=464 Identities=30% Similarity=0.577 Sum_probs=387.7
Q ss_pred CceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCcccc-CCc-ce--E--EEEEeCCeeeEEEEEEE
Q 007873 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-DV--V--IELKVGDKIEKVRFFHC 157 (586)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~-~~~-~~--~--~~~~~~~~~~~~~~~~~ 157 (586)
.|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|.+..+. +.. .. . ..+.++......+..+.
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 399999999999999999999999999999999999999999999877543 111 11 1 22233332222222223
Q ss_pred EeC--CceEEEEcCccccccccCCCCCcccCCC-CCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEe
Q 007873 158 HKR--GVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVA 234 (586)
Q Consensus 158 ~~~--gv~~~~v~~~~~~~~~w~~~~~~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~ 234 (586)
..+ |++++++++|.|+.| ..+|+.. .|.||.||..||.+||++++++++.+.+ +|| |||+
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH~ 147 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIHC 147 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEe
Confidence 333 699999999999987 5799876 6789999999999999999999987653 699 9999
Q ss_pred cCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHh
Q 007873 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 314 (586)
Q Consensus 235 h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (586)
|||+++++|.+++..++....+.++|+|+|+||..+||.++...+..+ +|..+...+. .....+++++.++
T Consensus 148 hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~i 218 (489)
T PRK14098 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTGV 218 (489)
T ss_pred cCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHHH
Confidence 999999999999877654444568999999999999998876555433 4443321110 0123578999999
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhh--ccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
..||.|+|+|+.+++++.....+|..++.+++ ..++.+|+||+|++.|+|.+++.+..+|+..++ +.|..++..+++
T Consensus 219 ~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~ 297 (489)
T PRK14098 219 EHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLE 297 (489)
T ss_pred HhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHH
Confidence 99999999999999999852234444555443 369999999999999999998888899998875 577788999999
Q ss_pred HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007873 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (586)
++|++.+++.++|+++||+.++||++.|++|++++.+++++|+|+|+|+..+++.+++++.++++++.+.+.++.++++.
T Consensus 298 ~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~ 377 (489)
T PRK14098 298 EVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377 (489)
T ss_pred HhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHH
Confidence 99999888889999999999999999999999999877999999999987788899999998888899999999999999
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc----CcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
+|++||++++||++|+||++++|||+||+|||++++||+.|++.+ +.+|+++ ++.|+++|+++|.+
T Consensus 378 ~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~~ 447 (489)
T PRK14098 378 AIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLGE 447 (489)
T ss_pred HHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999874 6899998 99999999999999
Q ss_pred HHHhc-CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 549 ALATY-GTQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 549 ll~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
+++.+ .++.++++++++++++|||+.++++|++.+.
T Consensus 448 ~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~ 484 (489)
T PRK14098 448 ALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYR 484 (489)
T ss_pred HHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 87532 2678899999999999999999999998654
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-63 Score=541.12 Aligned_cols=458 Identities=45% Similarity=0.752 Sum_probs=391.4
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCc----ceEEEEEeCCeeeEEEEEEEEeC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVIELKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (586)
|||++|++|++|+.++||+++++..|+++|+++||+|+|++|.|++..+.+.. .....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999876654332 23345566777778888888899
Q ss_pred CceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccc
Q 007873 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (586)
Q Consensus 161 gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~ 240 (586)
|+++++++++.++.+. ..+|++ ||.|+..||.+|+++++++++.+.. +|| |||+|+|+++
T Consensus 81 ~v~~~~i~~~~~~~r~-----~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~~ 140 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRP-----GGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHTA 140 (473)
T ss_pred CceEEEEECHHHcCCC-----CCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHHH
Confidence 9999999999877651 247864 6999999999999999999887543 699 9999999999
Q ss_pred hHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEE
Q 007873 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (586)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 320 (586)
+++.+++..++. .++|+|+|+|+..+++.++...+..++++..+.... ... +...+++++.++..||.|
T Consensus 141 ~~~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 141 LVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME----GLE---FYGRVNFLKGGIVYADRV 209 (473)
T ss_pred HHHHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch----hhh---cCCchHHHHHHHHhCCcC
Confidence 999999877521 148999999999999988876666667765543211 111 112578999999999999
Q ss_pred EEeCHHHHHHHhcCccCCCcchhhhh--ccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCC
Q 007873 321 LTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (586)
Q Consensus 321 itvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 398 (586)
++||+.+++++... .+|..++.+++ +.++.+|+||+|.+.|+|..+.++..+|+..+. ..+..++..+++++|++.
T Consensus 210 ~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 287 (473)
T TIGR02095 210 TTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPV 287 (473)
T ss_pred eecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCc
Confidence 99999999998852 35555544332 469999999999999999988888888988764 466777889999999987
Q ss_pred CCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 399 ~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+.+.++.++++.++++||
T Consensus 288 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (473)
T TIGR02095 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD 367 (473)
T ss_pred cCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCC
Confidence 66789999999999999999999999999877899999999986688899999988888888888999999999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC------cceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.+++..
T Consensus 368 v~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~~ 437 (473)
T TIGR02095 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALRL 437 (473)
T ss_pred EEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 999998 999999999999999982
Q ss_pred c--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC
Q 007873 553 Y--GTQALAEMMKNGMAQDLSWKVSIGTVQEEDSL 585 (586)
Q Consensus 553 ~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (586)
+ .++.+++|++++++++|||+.++++|++.+.-
T Consensus 438 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 438 YRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHh
Confidence 2 27889999999999999999999999987653
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-62 Score=530.60 Aligned_cols=451 Identities=42% Similarity=0.685 Sum_probs=372.8
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCc-ceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
|||+||+.+++|+.++||+++++..|+++|+++||+|+|++|.|+...+.... ....++ + ...+...+...+|++
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~gv~ 76 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL---D-LFTVLFGHLEGDGVP 76 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe---e-eEEEEEEeEEcCCce
Confidence 89999999999999999999999999999999999999999998765433211 111111 0 112222223458999
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
+++++++.++.+ ..+|+ |.|+..||.+|++++++.++.++. +|| |||+|+|++++++
T Consensus 77 v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~~~~ 133 (466)
T PRK00654 77 VYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTGLIP 133 (466)
T ss_pred EEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHHHHH
Confidence 999999988876 46775 789999999999999999987653 599 9999999999999
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
.+++..+ ..+ +.++|+|+|+|+..+++.+....+..++++..+.. .+... +....++++.++..||.|+|+
T Consensus 134 ~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 134 ALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred HHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcCeee
Confidence 9998765 222 35799999999999999887766666777665432 11110 112468899999999999999
Q ss_pred CHHHHHHHhcCccCCCcchhhh--hccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCC
Q 007873 324 SPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 401 (586)
|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+...|+..+. +.+..++..+++++|++. ++
T Consensus 205 S~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~-~~ 281 (466)
T PRK00654 205 SPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD-DD 281 (466)
T ss_pred CHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC-CC
Confidence 9999999875 22343333322 2458999999999999999988888888988765 577778899999999973 35
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
.++|+|+||+.++||++.|++|++++.+++++|+|+|+|+..+++.+++++.+++.++.....++.++.+.++++||+++
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v 361 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFL 361 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEE
Confidence 68999999999999999999999999777999999999987678899999999887777777788788889999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC------cceEEEccccccccCCCCCCHHHHHHHHHHHHHhc-C
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-G 554 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~-~ 554 (586)
+||++|+||++++|||+||+|||++++||+.|++.++ .+|+++ ++.|+++|+++|.++++.+ .
T Consensus 362 ~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~~~~ 431 (466)
T PRK00654 362 MPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALELYRQ 431 (466)
T ss_pred eCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999988 899998 9999999999999998743 2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 555 TQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
++.+.+|++++++++|||+.++++|++.+.
T Consensus 432 ~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~ 461 (466)
T PRK00654 432 PPLWRALQRQAMAQDFSWDKSAEEYLELYR 461 (466)
T ss_pred HHHHHHHHHHHhccCCChHHHHHHHHHHHH
Confidence 567889999999999999999999998653
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-61 Score=548.86 Aligned_cols=432 Identities=33% Similarity=0.554 Sum_probs=361.1
Q ss_pred eeeecCCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEE
Q 007873 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (586)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (586)
+.....++|||+||+.+++|+.++||+++++..|+++|+++||+|.|++|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 44455678999999999999999999999999999999999999999999987643321111111122222223467788
Q ss_pred EEeCCceEEEEcCcc-ccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEec
Q 007873 157 CHKRGVDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 235 (586)
Q Consensus 157 ~~~~gv~~~~v~~~~-~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h 235 (586)
...+|+++++++++. ++.+ ..+|+ +.|+..||.+||+++++.++.+.+ +|| |||+|
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaH 716 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCH 716 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEEC
Confidence 888999999999763 5554 35675 789999999999999999987653 699 99999
Q ss_pred CCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhh
Q 007873 236 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 315 (586)
Q Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (586)
||++++++.+++..++..+ +.++|+|+|+|++.++. +.++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999988765444 36799999999875421 33567789
Q ss_pred cCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhC
Q 007873 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (586)
Q Consensus 316 ~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 395 (586)
.||.|+|||+.+++++... .++.. +..++.+|+||||++.|+|.++++++.+|++.++.+.|..++..+|+++|
T Consensus 761 ~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 9999999999999999852 22221 12489999999999999999999999999999888888889999999999
Q ss_pred CCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHHC----CCceEEEeccChHHH
Q 007873 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLA 470 (586)
Q Consensus 396 l~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~-~~~~~~l~~l~~~~----~~~v~~~~~~~~~~~ 470 (586)
++. .+.|+|+|+|||.++||++.|++|++.+.+.+++|+|+|+|+ ..++..+++++.++ ++++.+.+.++..+.
T Consensus 835 L~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 983 356899999999999999999999999877789999999995 44677788888754 457888888888888
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC-------------cceEEEccccccccCCCCC
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPV 537 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~~~~~~~~~~~~v~~~ 537 (586)
+.+|++||++|+||++|+||++++|||+||+|||++++||++|+|.++ .|||+| ++.
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~ 983 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGA 983 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCC
Confidence 899999999999999999999999999999999999999999999884 699998 999
Q ss_pred CHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 538 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 538 d~~~la~~I~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
|+++|+.+|.+++.++ .+..+.++++++|.++|||+.++++|++.+.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~ 1032 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYH 1032 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9999999999999874 2345688888999999999999999998763
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-59 Score=510.63 Aligned_cols=462 Identities=44% Similarity=0.737 Sum_probs=386.7
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEE----EEEeCCeeeEEEEEEEEeCC
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI----ELKVGDKIEKVRFFHCHKRG 161 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g 161 (586)
||+||++|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+...... .+..+.....++..+...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 79999999999999999999999999999999999999999998766554333222 23455566678888888999
Q ss_pred ceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccch
Q 007873 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (586)
Q Consensus 162 v~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~ 241 (586)
++++++++|.++.+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +|| |||+|||++++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~~ 142 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTGL 142 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHHH
Confidence 99999999998876 3444 455667999999999999999999987643 599 99999999999
Q ss_pred HHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEE
Q 007873 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (586)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 321 (586)
++.+++..++. ..+.++|+|+|+|+..+++.++...+...+++.... ...+. ..+....++++.++..||.|+
T Consensus 143 ~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~ad~v~ 215 (476)
T cd03791 143 VPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL---FHIDG---LEFYGQVNFLKAGIVYADAVT 215 (476)
T ss_pred HHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch---hhhcc---cccCCcccHHHHHHHhcCcCe
Confidence 99999887543 334589999999999998877765554443332100 01111 112235688899999999999
Q ss_pred EeCHHHHHHHhcCccCCCcchhhhh--ccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCC
Q 007873 322 TVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (586)
Q Consensus 322 tvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 399 (586)
++|+.+++++.. ..+|..++.+++ ..++.+|+||+|.+.|.|..+..+...|+... ...+...+..+++++|++.+
T Consensus 216 ~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~-~~~~~~~k~~l~~~~g~~~~ 293 (476)
T cd03791 216 TVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADD-LEGKAENKAALQEELGLPVD 293 (476)
T ss_pred ecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccc-cccHHHHHHHHHHHcCCCcC
Confidence 999999999885 234444444443 36999999999999999998888888888543 46788889999999999866
Q ss_pred CCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|+..+++.++++..++++++.+...++.++.+.++++||+
T Consensus 294 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 294 PDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 77899999999999999999999999998777999999999877888899988887778988888998888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCc------ceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
+++||++|+||++++|||+||+|||++++||+.|++.++. +|+++ ++.|+++++++|.++++.+
T Consensus 374 ~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~~ 443 (476)
T cd03791 374 FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALALY 443 (476)
T ss_pred EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 99998 9999999999999998754
Q ss_pred -CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 554 -GTQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 554 -~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
.++.+.++++++++++|||+.++++|++.+.
T Consensus 444 ~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 444 RDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred cCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 2678899999999999999999999998763
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-58 Score=486.82 Aligned_cols=459 Identities=39% Similarity=0.626 Sum_probs=393.3
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcc----eEEEEEeCCeeeEEEEEEEEeC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (586)
|||++++.++.|+.++||++++++.|+++|++.||+|.|+.|.|+..++.+... ....+..+.........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999998666655543 1222233333322333333323
Q ss_pred -CceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCcc
Q 007873 161 -GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (586)
Q Consensus 161 -gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~ 239 (586)
|++.+++++|.++.|. ...+.++.||.+||..|++++++.+...... +.|| |||+|||++
T Consensus 81 ~~v~~~lid~~~~f~r~----------~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWqt 141 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----------DSTLYGYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQT 141 (487)
T ss_pred CCCcEEEecChhhcCcc----------ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHHH
Confidence 3999999999888751 1233349999999999999999988665410 3599 999999999
Q ss_pred chHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCE
Q 007873 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (586)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 319 (586)
+++|.+++..++. +..+|.||||||+.+||.|....+..++||..+...+ ....+ ...+++|.++..||.
T Consensus 142 ~L~~~~lk~~~~~---~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~-~l~~~------~~~~~lK~gi~~ad~ 211 (487)
T COG0297 142 GLLPAYLKQRYRS---GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASF-GLEFY------GQISFLKGGLYYADA 211 (487)
T ss_pred HHHHHHHhhcccc---cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhc-eeeec------CcchhhhhhheeccE
Confidence 9999999986411 2589999999999999999977778899998776622 22211 246889999999999
Q ss_pred EEEeCHHHHHHHhcCccCCCcchhhhhc--cCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCC
Q 007873 320 VLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 397 (586)
Q Consensus 320 vitvS~~~~~~l~~~~~~g~~~~~~~~~--~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 397 (586)
|.|||+.+++++. ..++|..++..++. .++++|.||+|...|+|.++.++...|+..+.. .+..++..+++++||+
T Consensus 212 vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL~ 289 (487)
T COG0297 212 VTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGLD 289 (487)
T ss_pred EEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCCC
Confidence 9999999999999 46788777776654 688999999999999999999999999998875 5999999999999999
Q ss_pred CCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 398 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 398 ~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
.+.+.|++.++||+..|||+|.+++++..+.+..++++++|+|+..++..+..++..+++++.....|+.+..+.++++|
T Consensus 290 ~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~aga 369 (487)
T COG0297 290 VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGA 369 (487)
T ss_pred CCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcC
Confidence 88888999999999999999999999999998889999999999899999999999999989999999999999999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc--------CcceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
|++++||++||||+++++||++|+++|+..+||++|+|.+ ..||++| .+.|+++|+.+|.++
T Consensus 370 D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~rA 439 (487)
T COG0297 370 DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRRA 439 (487)
T ss_pred CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 5899999 888999999999999
Q ss_pred HHhcC-HHH-HHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 550 LATYG-TQA-LAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 550 l~~~~-~~~-~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
+.-+. ++. ++.+..++|..+|||+..+++|.+-+.
T Consensus 440 ~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 440 LVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYK 476 (487)
T ss_pred HHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHH
Confidence 98763 344 899999999999999999999998553
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=375.37 Aligned_cols=447 Identities=18% Similarity=0.150 Sum_probs=285.9
Q ss_pred CCCceEEEEeccccC---------ccccchHHHHhhhhHHHHHhCC--CeEEEEEecCCCccccCCcceEEEEEeCCe-e
Q 007873 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~L~~~L~~~G--h~V~vvt~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (586)
.++|.|++|+..-.| ...+||...|+.+|+++|+++| |+|.++|.....-...|+.....+.. +.. .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 458999999854222 2358999999999999999998 89999998743211112222121110 000 0
Q ss_pred eEEEEEEEEeCCceEEEEcCc---cccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCC--C
Q 007873 150 EKVRFFHCHKRGVDRVFVDHP---WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS--G 224 (586)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~---~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 224 (586)
+.........+|+.++.++-. .++.+ ..-+-....|...++..++.+....-..+. .
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~ 307 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGH 307 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccc
Confidence 000011112357777776521 12222 001112233555555444321000000000 0
Q ss_pred CCCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCC-cC
Q 007873 225 PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKP-VR 303 (586)
Q Consensus 225 ~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~ 303 (586)
+-.|| |||+|+|.++.++..++... ++|+|+|.|.+.....- . ++....... +..... ..
T Consensus 308 ~~~pD-vIHaHyw~sG~aa~~L~~~l-------gVP~V~T~HSLgr~K~~---~--ll~~g~~~~------~~~~~~y~~ 368 (1050)
T TIGR02468 308 PVWPY-VIHGHYADAGDSAALLSGAL-------NVPMVLTGHSLGRDKLE---Q--LLKQGRMSK------EEINSTYKI 368 (1050)
T ss_pred CCCCC-EEEECcchHHHHHHHHHHhh-------CCCEEEECccchhhhhh---h--hcccccccc------cccccccch
Confidence 11399 99999999999999999874 99999999986421110 0 000000000 000000 01
Q ss_pred CcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcc--hhhhh-------------ccCeeEecCCcccCCcCCCCcc
Q 007873 304 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVEL--DNIIR-------------KTGIKGIVNGMDVQEWNPLTDK 368 (586)
Q Consensus 304 ~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~--~~~~~-------------~~~i~vI~ngvd~~~~~p~~~~ 368 (586)
.+.+...+..+..||.||++|+..++++...+. +.++ +..++ ..++.|||||+|++.|.|....
T Consensus 369 ~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~ 447 (1050)
T TIGR02468 369 MRRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGD 447 (1050)
T ss_pred HHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCcc
Confidence 134456678899999999999999998765321 1111 00000 1289999999999999986421
Q ss_pred ccccccCcc-ccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc----CCeEEEEEeCCCh-
Q 007873 369 YIGVKYDAS-TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKK- 442 (586)
Q Consensus 369 ~~~~~~~~~-~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~----~~v~lvIvG~g~~- 442 (586)
.-......+ ......+.....+++.+. + ++.++|+|+||+.++||++.||+|+..+.. +++. +|+|+|+.
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~l~r~~~-~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~ 523 (1050)
T TIGR02468 448 MDGETEGNEEHPAKPDPPIWSEIMRFFT-N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI 523 (1050)
T ss_pred ccchhcccccccccccchhhHHHHhhcc-c--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh
Confidence 000000000 000000011123333332 2 356899999999999999999999999853 3565 46687642
Q ss_pred --------hhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC
Q 007873 443 --------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (586)
Q Consensus 443 --------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a----Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~ 508 (586)
.+...+.++..+++ ++|.+.+..+.++++.+|+.| |+||+||++|+||++++||||||+|||+|+.
T Consensus 524 d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdv 603 (1050)
T TIGR02468 524 DEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKN 603 (1050)
T ss_pred hhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCC
Confidence 12345666666655 456666666778888999888 6999999999999999999999999999999
Q ss_pred cCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 509 GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 509 gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
||+.|++.++.+|+++ +|.|+++|+++|.+++++ ++.+++|++++. .++|||+.++++|++..
T Consensus 604 GG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i 668 (1050)
T TIGR02468 604 GGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSRI 668 (1050)
T ss_pred CCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999998 888999999984 46899999999999753
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=351.60 Aligned_cols=389 Identities=19% Similarity=0.178 Sum_probs=259.1
Q ss_pred ccchHHHHhhhhHHHHHhCCC--eEEEEEecCCCcc--ccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccc
Q 007873 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (586)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh--~V~vvt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~ 174 (586)
..||++.++.+|+++|+++|| +|.|+|..++.-. ..+. .......+|++++.++....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~~-- 85 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGPR-- 85 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCCC--
Confidence 489999999999999999997 9999997643210 0000 00123346888877743110
Q ss_pred cccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCC
Q 007873 175 KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKG 254 (586)
Q Consensus 175 ~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~ 254 (586)
.|.. ..+-......+...+.+.++... .+|| |||+|.|..++++..++..
T Consensus 86 ---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~----- 135 (439)
T TIGR02472 86 ---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL----- 135 (439)
T ss_pred ---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH-----
Confidence 0100 00001111234444555554321 1499 9999998887777766655
Q ss_pred CCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCc-CCcchhhhhHHhhcCCEEEEeCHHHHHHHhc
Q 007873 255 MYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPV-RGRKINWMKAGILESDMVLTVSPHYAQELVS 333 (586)
Q Consensus 255 ~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~ 333 (586)
.++|+|+|.|+...... ..+...++.... +.+.+ ....+.+.+..++.+|.|+++|+....+...
T Consensus 136 --~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 201 (439)
T TIGR02472 136 --LGVPLIFTGHSLGREKR---RRLLAAGLKPQQ---------IEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYA 201 (439)
T ss_pred --hCCCEEEecccccchhh---hhcccCCCChhh---------hhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 47899999997532100 000000000000 00000 0112234577889999999999865544332
Q ss_pred CccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCcc
Q 007873 334 GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 413 (586)
Q Consensus 334 ~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~ 413 (586)
. ..+++.+ ++.+||||+|++.|.|.... ......+..+ ++++.+. +.++|+|+||+.+
T Consensus 202 ~-~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~~--~~~~i~~vGrl~~ 259 (439)
T TIGR02472 202 L-YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKDP--EKPPILAISRPDR 259 (439)
T ss_pred h-ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhcccc--CCcEEEEEcCCcc
Confidence 1 1244433 89999999999999875421 0111112222 2334332 4579999999999
Q ss_pred ccCHHHHHHHHhhccc--CCeEEE-EEeCCCh--hh-------HHHHHHHHHHC--CCceEEEeccChHHHHHHHHhc--
Q 007873 414 QKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGA-- 477 (586)
Q Consensus 414 ~KG~d~Ll~A~~~l~~--~~v~lv-IvG~g~~--~~-------~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~a-- 477 (586)
.||++.|++|+..+.. ++.+++ |+|+|+. .+ .+.+.++..++ .+++.+.+..+.++++.+|+.|
T Consensus 260 ~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 260 RKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAAR 339 (439)
T ss_pred cCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 9999999999986532 234443 5687652 11 12233444443 3467666666778888899877
Q ss_pred --cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCH
Q 007873 478 --DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (586)
Q Consensus 478 --Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~ 555 (586)
|++++||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++|+++|+++|.+++++ +
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~ 407 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--S 407 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999999999999999999999999999999999999999999998 999999999999999998 7
Q ss_pred HHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 556 QALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 556 ~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
+.+++|++++. .++|||+.++++|++..
T Consensus 408 ~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 408 SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 88888999884 58999999999998753
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=355.90 Aligned_cols=473 Identities=18% Similarity=0.229 Sum_probs=363.6
Q ss_pred EEEEecccc-----CccccchHHHHhhhhHHHHHhCCCeEEEEEecCCC-cc--------------ccCC-------c--
Q 007873 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK--------------DAWD-------T-- 137 (586)
Q Consensus 87 Il~v~~~~~-----P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~-~~--------------~~~~-------~-- 137 (586)
|++++.||. | ...||+|+..+...++++..|.....++-.|.. |- +.|+ .
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 345555532 4 258999999999999999999999999887642 11 1121 0
Q ss_pred -----ceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccccccCCCCC-cccCCCCCCCCcchhHHHHHHHHHHHHHh
Q 007873 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAP 211 (586)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (586)
...+.+.+.+....++......+++++++++++..-+..|.+... .+|++ |..+++.++.+|+.++++.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l 155 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRAL 155 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHH
Confidence 124566676677778888888889999999988622222333332 47863 35566677799999999999
Q ss_pred HhhcccCCCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCCC-------CCCceEEEEEcCCccccc--cCccccc--
Q 007873 212 RILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-------YKSAKVVFCIHNIAYQGR--FAFEDFG-- 280 (586)
Q Consensus 212 ~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~-------~~~~pvv~~iH~~~~~~~--~~~~~~~-- 280 (586)
+.+.+ +|| |||+||||+++++.++....-..+. ..+.+++||+|++.+||. |+...+.
T Consensus 156 ~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~ 224 (601)
T TIGR02094 156 RALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKY 224 (601)
T ss_pred HHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHH
Confidence 88764 599 9999999999999886432111110 014789999999999997 8877663
Q ss_pred ------ccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhh--ccCeeE
Q 007873 281 ------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKG 352 (586)
Q Consensus 281 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~--~~~i~v 352 (586)
.++++..+........ +-....+++++.++..||.|.+||+.+.+.... . .+ .+.+.++ ..++..
T Consensus 225 ~~~~~~~~gl~~~~~~~~~~~~----~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~-l-~~-~l~~~~~~~~~~i~g 297 (601)
T TIGR02094 225 FGDYAANLGLPREQLLALGREN----PDDPEPFNMTVLALRLSRIANGVSKLHGEVSRK-M-WQ-FLYPGYEEEEVPIGY 297 (601)
T ss_pred hhhhhhHhCCCHHHHHhhhhhc----cCccCceeHHHHHHHhCCeeeeecHHHHHHHHH-H-HH-hhhhhcccccCCccc
Confidence 3566665543221111 000134799999999999999999988873321 0 11 0111111 236899
Q ss_pred ecCCcccCCcCCCCccccccccCcccc---------------------ccccHHHHHHHHH-------------------
Q 007873 353 IVNGMDVQEWNPLTDKYIGVKYDASTV---------------------MDAKPLLKEALQA------------------- 392 (586)
Q Consensus 353 I~ngvd~~~~~p~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~------------------- 392 (586)
|.||||...|.|.+++.+..+|+.+++ .+.|..+|.+|++
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 999999999999999999999998883 3688889999988
Q ss_pred --HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCChh------hHHHHHHHHHH--CC
Q 007873 393 --EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YP 456 (586)
Q Consensus 393 --~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~~~------~~~~l~~l~~~--~~ 456 (586)
++|++.+++.+++++++|+.++||++++++++.++.+ .++||||+|++.+. +++.+.+++.+ ++
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 5788888899999999999999999999999888853 48999999998854 89999999988 88
Q ss_pred CceEEEeccChHHHHHHHHhccEEEE-cCC-CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEcc--cccccc
Q 007873 457 EKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS--FSVDCE 532 (586)
Q Consensus 457 ~~v~~~~~~~~~~~~~~l~~aDi~l~-PS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~--~~~~~~ 532 (586)
+++.+...|+.++++.++++||++++ ||+ +|+||++.+-||..|.+-+++..|...|.. ++.|||.||. ...|-+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccc
Confidence 89999999999999999999999999 999 999999999999999999999999999987 6789999962 222333
Q ss_pred CCCCCCHHHHHHHHHHHH-Hhc-C------HHHHHHHHHHHHHh---cCCHHHHHHHHHHHh
Q 007873 533 AVDPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKVSIGTVQEED 583 (586)
Q Consensus 533 ~v~~~d~~~la~~I~~ll-~~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~~ 583 (586)
..+..|+++|.++|++.+ ..+ . +..+.+|.+++|+. +|||++++++|.+.+
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 445789999999998877 332 1 34689999999987 899999999999864
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=348.50 Aligned_cols=390 Identities=17% Similarity=0.197 Sum_probs=274.7
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++++..|+|. .||++.++.+|+++|.++||+|+|+|+. +.+.. |... .............+|+.+
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~-~~~~~-~~~~--------~~~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAP-PYYPQ-WRVG--------EGYSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecC-CCCCC-CCCC--------cccccccceeeecCCeEE
Confidence 8999999998886 8999999999999999999999999976 21211 1000 000001112233467777
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHH-hHhhcccCCCCCCCCCCCCEEEEecCCcc--ch
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHT--SL 241 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvii~~h~~~~--~~ 241 (586)
+.++....... . ..........|....+.. .+... .+|| |||+|.... +.
T Consensus 69 ~r~~~~~~~~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~~ 121 (412)
T PRK10307 69 WRCPLYVPKQP---------S-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCAP 121 (412)
T ss_pred EEccccCCCCc---------c-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHHH
Confidence 77643211000 0 000111111121222221 22211 2699 899987442 23
Q ss_pred HHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCc-chhhhhHHhhcCCEE
Q 007873 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDMV 320 (586)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ad~v 320 (586)
....+++. .++|+++++|+..+...+. .+.. ..+...+ ...+++..++.+|.|
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~-------------~~~~~~~~~~~~~~~~~~~ad~i 175 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYEVDAAFG------LGLL-------------KGGKVARLATAFERSLLRRFDNV 175 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCc-------------cCcHHHHHHHHHHHHHHhhCCEE
Confidence 33444444 4789999999765421110 0000 0000001 123456778899999
Q ss_pred EEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCC
Q 007873 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (586)
Q Consensus 321 itvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 400 (586)
+++|+..++.+.+ +|++.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 176 i~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~-- 227 (412)
T PRK10307 176 STISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD-- 227 (412)
T ss_pred EecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC--
Confidence 9999999999875 455433 89999999999888765321 1235677888864
Q ss_pred CCcEEEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhcc
Q 007873 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~~l~~aD 478 (586)
+.++|+|+|++.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++ .++.+.+..+.+++..+++.||
T Consensus 228 ~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aD 305 (412)
T PRK10307 228 GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMAD 305 (412)
T ss_pred CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcC
Confidence 45899999999999999999999998865 689999999998 5667777766554 3688887778889999999999
Q ss_pred EEEEcCCCCC----CcHHHHHHHHcCCcEEEcCCcC--cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 479 FILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
++++||..|+ +|.+++|||+||+|||+|+.|| +.|++. .+|+++ +++|+++++++|.+++++
T Consensus 306 i~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 306 CHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALARQ 373 (412)
T ss_pred EeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999988 6788999999999999999877 458887 599998 999999999999999998
Q ss_pred cCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 553 YGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++.+++|++++. +++|||+.++++|++.+
T Consensus 374 --~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~ 405 (412)
T PRK10307 374 --ALLRPKLGTVAREYAERTLDKENVLRQFIADI 405 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 888899999985 47899999999998864
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=346.57 Aligned_cols=382 Identities=19% Similarity=0.268 Sum_probs=273.3
Q ss_pred EEEEeccccCcc-----ccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCC
Q 007873 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (586)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (586)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 466777666652 159999999999999999999999999763211100 0112346
Q ss_pred ceEEEEcCccccccccCCCCCcccCCCCCCCCcchhH-HHHHHHHHHH-HHhHhhcccCCCCCCCCCCCCEEEEecCCcc
Q 007873 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (586)
Q Consensus 162 v~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~ 239 (586)
+.++.+....+... ...... .+..|....+ ..++.. ..+|| |||+|.|.+
T Consensus 61 ~~v~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-iih~h~~~~ 112 (405)
T TIGR03449 61 VRVRNVVAGPYEGL-----------------DKEDLPTQLCAFTGGVLRAEARHE----------PGYYD-LIHSHYWLS 112 (405)
T ss_pred cEEEEecCCCcccC-----------------CHHHHHHHHHHHHHHHHHHHhhcc----------CCCCC-eEEechHHH
Confidence 66665532211110 000111 1111222222 222221 12599 899999887
Q ss_pred chHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCE
Q 007873 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (586)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 319 (586)
+.++.++++. .++|+|+++|+...... ..+.....+. ......+.+..++.+|.
T Consensus 113 ~~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~~~----------------~~~~~~~e~~~~~~~d~ 166 (405)
T TIGR03449 113 GQVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDTPE----------------PEARRIGEQQLVDNADR 166 (405)
T ss_pred HHHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCCCc----------------hHHHHHHHHHHHHhcCe
Confidence 7777666654 47899999997532100 0000000000 00111223557889999
Q ss_pred EEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCC
Q 007873 320 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (586)
Q Consensus 320 vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 399 (586)
++++|+...+.+.. .+|.+.+ ++.+||||+|.+.|.|.. +...+++++++.
T Consensus 167 vi~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~- 217 (405)
T TIGR03449 167 LIANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL- 217 (405)
T ss_pred EEECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC-
Confidence 99999998888774 2455433 899999999998887653 344677788764
Q ss_pred CCCcEEEEEecCccccCHHHHHHHHhhccc--CC--eEEEEEeCCCh---hhHHHHHHHHHHCC--CceEEEeccChHHH
Q 007873 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKFNIPLA 470 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~--v~lvIvG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 470 (586)
+.++|+|+||+.+.||++.+++|++++.+ ++ ++|+|+|++.. ...+.++++..+++ .++.+.+..+.+++
T Consensus 218 -~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 296 (405)
T TIGR03449 218 -DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEEL 296 (405)
T ss_pred -CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence 45899999999999999999999998855 44 99999996321 24566777776655 46877777778888
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
..+|+.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++
T Consensus 297 ~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l 366 (405)
T TIGR03449 297 VHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLL 366 (405)
T ss_pred HHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999997 8999999999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHhc
Q 007873 551 ATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (586)
++ ++.+++|++++. .++|||+.++++|++.+.
T Consensus 367 ~~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~ 400 (405)
T TIGR03449 367 DD--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYR 400 (405)
T ss_pred hC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 98 788888888874 478999999999998653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=341.89 Aligned_cols=370 Identities=21% Similarity=0.268 Sum_probs=267.1
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++|+..|+|. ..||.+.++.+|+++|+++ |+|.|++...... ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998885 4599999999999999987 8888887642110 0123444
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.+..+..... +...... +.. .+..... ..++| |||+|.|..++.+.
T Consensus 53 ~~~~~~~~~~~-----------------~~~~~~~---~~~---~~~~~~~---------~~~~d-ivh~~~~~~~~~~~ 99 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKALGT---FSV---DLAMAND---------PVDAD-VVHSHTWYTFLAGH 99 (388)
T ss_pred EEecChhhccc-----------------hhhhhhh---hhH---HHHHhhC---------CCCCC-eEeecchhhhhHHH
Confidence 33321110000 0000000 100 1111111 12599 99999988776665
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
...+. .++|+++++|+..+...+.... .+. + +.....+.+..++.+|.++++|
T Consensus 100 ~~~~~-------~~~p~v~~~h~~~~~~~~~~~~---~~~------------~-----~~~~~~~~~~~~~~ad~vi~~S 152 (388)
T TIGR02149 100 LAKKL-------YDKPLVVTAHSLEPLRPWKEEQ---LGG------------G-----YKLSSWAEKTAIEAADRVIAVS 152 (388)
T ss_pred HHHHh-------cCCCEEEEeecccccccccccc---ccc------------c-----hhHHHHHHHHHHhhCCEEEEcc
Confidence 54443 4899999999864321111000 000 0 0011123466788999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+.+++.+.+.. .+++. .++.+||||+|...|.|.. +..++++++++. +.++
T Consensus 153 ~~~~~~~~~~~-~~~~~------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~ 203 (388)
T TIGR02149 153 GGMREDILKYY-PDLDP------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRPY 203 (388)
T ss_pred HHHHHHHHHHc-CCCCc------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--CceE
Confidence 99999887521 13332 3899999999998887653 446778888864 4589
Q ss_pred EEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHHCCC---ceEEEe-ccChHHHHHHHHhcc
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGAD 478 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~~l~~aD 478 (586)
|+|+||+.+.||++.|++|++++. ++++++++|+|. ..+.+.+++....++. ++.+.. ..+.+++..+++.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999984 578999988765 2345566666555432 355544 357788899999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCH------HHHHHHHHHHHHh
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~------~~la~~I~~ll~~ 552 (586)
++++||.+|++|++++|||+||+|||+++.||..|++.++.+|+++ +++|+ ++++++|.+++++
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLAD 352 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999998 88888 9999999999998
Q ss_pred cCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 553 YGTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++.+++|+++++ .++|||+.++++|.+.++
T Consensus 353 --~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~ 385 (388)
T TIGR02149 353 --PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYR 385 (388)
T ss_pred --HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 888899999885 478999999999998764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=341.33 Aligned_cols=357 Identities=18% Similarity=0.215 Sum_probs=254.1
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+..|+|. .||.++++.+|+++|+++||+|.|+++.++..... ....+|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999996 89999999999999999999999999864321110 0012355555
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH--
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP-- 243 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~-- 243 (586)
.++...+... .. .. .+..+...+...++. .+|| |||+|++......
T Consensus 58 ~~p~~~~~~~-------~~--------~~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~~ 105 (398)
T cd03796 58 YLPFVVFYNQ-------ST--------LP----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHEA 105 (398)
T ss_pred EecceeccCC-------cc--------cc----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHHH
Confidence 5532211110 00 00 000111122222222 2699 9999987655432
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..+.+. .++|+|++.|+... ..+.. .. ....+++..++++|.++++
T Consensus 106 ~~~~~~-------~~~~~v~t~h~~~~-----~~~~~-----~~-----------------~~~~~~~~~~~~~d~ii~~ 151 (398)
T cd03796 106 LLHART-------MGLKTVFTDHSLFG-----FADAS-----SI-----------------HTNKLLRFSLADVDHVICV 151 (398)
T ss_pred HHHhhh-------cCCcEEEEeccccc-----ccchh-----hH-----------------HhhHHHHHhhccCCEEEEe
Confidence 222222 47899999997431 00000 00 0112345567899999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+...+.+.. ..+++. +++.+||||+|.+.|.|..++ .+++.+
T Consensus 152 s~~~~~~~~~--~~~~~~------~k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~~ 194 (398)
T cd03796 152 SHTSKENTVL--RASLDP------ERVSVIPNAVDSSDFTPDPSK-----------------------------RDNDKI 194 (398)
T ss_pred cHhHhhHHHH--HhCCCh------hhEEEEcCccCHHHcCCCccc-----------------------------CCCCce
Confidence 9998876542 134433 389999999999888775421 123568
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
+|+|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+..+.+++..+++.||+
T Consensus 195 ~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~ 272 (398)
T cd03796 195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHI 272 (398)
T ss_pred EEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 99999999999999999999998865 789999999997 4556777766654 46888877788899999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||..|+||++++|||+||+|||+++.||..|++.++. +++ .+.|+++++++|.+++++ .....
T Consensus 273 ~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~-----------~~~~~~~l~~~l~~~l~~--~~~~~ 338 (398)
T cd03796 273 FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILL-----------AEPDVESIVRKLEEAISI--LRTGK 338 (398)
T ss_pred EEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCc-eee-----------cCCCHHHHHHHHHHHHhC--hhhhh
Confidence 9999999999999999999999999999999999998864 333 455899999999999987 33332
Q ss_pred HHHHHH---HHhcCCHHHHHHHHHHHhc
Q 007873 560 EMMKNG---MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 560 ~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (586)
.+.+++ .+++|||+.++++|++.+.
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 366 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYD 366 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 333433 5789999999999998653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=353.27 Aligned_cols=422 Identities=15% Similarity=0.164 Sum_probs=273.1
Q ss_pred CceEEEEeccc----cCc---cccchHHHHhhhhHHHH--------HhCCC----eEEEEEecCCCccccCCcceEEEEE
Q 007873 84 GLNILFVGTEV----APW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (586)
Q Consensus 84 ~MkIl~v~~~~----~P~---~~~GG~~~~~~~L~~~L--------~~~Gh----~V~vvt~~~~~~~~~~~~~~~~~~~ 144 (586)
.|||++|+... .|. ..+||...|+.+|+++| +++|| +|.|+|...+.... .+.....+..
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~~ 333 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEKV 333 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-cccccccccc
Confidence 59999999876 221 12799999999999985 68999 77799977432110 0001111110
Q ss_pred eCCeeeEEEEEEEEeCCceEEEEcC--------ccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhH-hhc
Q 007873 145 VGDKIEKVRFFHCHKRGVDRVFVDH--------PWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR-ILN 215 (586)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~v~~--------~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 215 (586)
. ..+|+.++.++- +.|..| .. -+-....|...+.+.++ ..+
T Consensus 334 ~------------~~~~~~I~rvp~g~~~~~~~~~~i~k------~~------------l~p~l~~f~~~~~~~~~~~~~ 383 (784)
T TIGR02470 334 Y------------GTEHAWILRVPFRTENGIILRNWISR------FE------------IWPYLETFAEDAEKEILAELQ 383 (784)
T ss_pred c------------CCCceEEEEecCCCCcccccccccCH------HH------------HHHHHHHHHHHHHHHHHHhcC
Confidence 0 013444444431 111221 00 01111234444444332 222
Q ss_pred ccCCCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccc
Q 007873 216 LNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI 295 (586)
Q Consensus 216 ~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 295 (586)
-+|| +||+|.|.+++++..++... ++|.++|.|.+....... .....-....++..
T Consensus 384 ----------~~pD-lIHahy~d~glva~lla~~l-------gVP~v~t~HsL~~~K~~~-~g~~~~~~e~~~~~----- 439 (784)
T TIGR02470 384 ----------GKPD-LIIGNYSDGNLVASLLARKL-------GVTQCTIAHALEKTKYPD-SDIYWQEFEDKYHF----- 439 (784)
T ss_pred ----------CCCC-EEEECCCchHHHHHHHHHhc-------CCCEEEECCcchhhcccc-cccccccchhHHHh-----
Confidence 1599 99999999999998888774 999999999875422110 00000000000000
Q ss_pred cCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHH----Hhc---Cc------cC----CCcchhhhhccCeeEecCCcc
Q 007873 296 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE----LVS---GE------DK----GVELDNIIRKTGIKGIVNGMD 358 (586)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~----l~~---~~------~~----g~~~~~~~~~~~i~vI~ngvd 358 (586)
...+.-...++..||.|+|.|...... +.. .. .+ |++. ...++.+||+|+|
T Consensus 440 --------~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD 507 (784)
T TIGR02470 440 --------SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGAD 507 (784)
T ss_pred --------hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcC
Confidence 001122346788899999999765332 110 00 01 2211 1348899999999
Q ss_pred cCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEE
Q 007873 359 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIV 436 (586)
Q Consensus 359 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvI 436 (586)
...|.|.+.+.-... ......+....++.+.++.+|+..++++|+|+++||+.++||++.|++|+.++.. ++++|+|
T Consensus 508 ~~iF~P~~~~~~r~~-~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVI 586 (784)
T TIGR02470 508 ESIYFPYSDKEKRLT-NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVV 586 (784)
T ss_pred hhhcCCCCchhhhhh-hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEE
Confidence 998887543100000 0000000111234556788898667788999999999999999999999987643 5799999
Q ss_pred EeCCCh----------hhHHHHHHHHHHCC--CceEEEecc-ChHHHHHHH---H-hccEEEEcCCCCCCcHHHHHHHHc
Q 007873 437 LGTGKK----------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRY 499 (586)
Q Consensus 437 vG~g~~----------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~~l---~-~aDi~l~PS~~E~~gl~~lEAma~ 499 (586)
+|++.. ...+.+.+++.+++ +++.+.+.. +.....+++ + .+|++++||++|+||++++|||+|
T Consensus 587 VGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc 666 (784)
T TIGR02470 587 VAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC 666 (784)
T ss_pred EeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc
Confidence 998642 13356667777765 567766643 333333333 3 468999999999999999999999
Q ss_pred CCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh--cCHHHHHHHHHHHH---HhcCCHHH
Q 007873 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKV 574 (586)
Q Consensus 500 G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~ 574 (586)
|+|||+|+.||+.|+|.++.+|+++ +|.|+++++++|.++++. ..++.+++|+++++ .++|||+.
T Consensus 667 GlPVVAT~~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 667 GLPTFATRFGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKI 736 (784)
T ss_pred CCCEEEcCCCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999998 999999999999998741 12788999999986 47999999
Q ss_pred HHHHHHHHh
Q 007873 575 SIGTVQEED 583 (586)
Q Consensus 575 ~a~~~~~~~ 583 (586)
.++++++..
T Consensus 737 ~A~~ll~l~ 745 (784)
T TIGR02470 737 YSERLLTLA 745 (784)
T ss_pred HHHHHHHHH
Confidence 999998754
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=346.24 Aligned_cols=368 Identities=18% Similarity=0.250 Sum_probs=262.6
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCC
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (586)
+++|||+++.... |+...||.+.++.+|+++|.++||+|+++++... .... ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~-~~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEG-VPQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCC-CCcc------------------------ccC
Confidence 6789999998543 3345899999999999999999999999998632 1110 012
Q ss_pred ceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccch
Q 007873 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (586)
Q Consensus 162 v~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~ 241 (586)
+.++.+.. +.. ..|.. + ...+ .+...+.+.++.. +|| |||+|......
T Consensus 110 ~~v~~~~~--~~~--------~~~~~-----~---~~~~-~~~~~l~~~i~~~------------kpD-iIh~~~~~~~~ 157 (465)
T PLN02871 110 AKVIGSWS--FPC--------PFYQK-----V---PLSL-ALSPRIISEVARF------------KPD-LIHASSPGIMV 157 (465)
T ss_pred ceeeccCC--cCC--------ccCCC-----c---eeec-cCCHHHHHHHHhC------------CCC-EEEECCCchhH
Confidence 22221110 000 00000 0 0000 0001222333332 599 99999754332
Q ss_pred -HHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEE
Q 007873 242 -IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (586)
Q Consensus 242 -~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 320 (586)
....+.+. .++|+|++.|+..... .. ..... ........+++..++.+|.+
T Consensus 158 ~~~~~~ak~-------~~ip~V~~~h~~~~~~-~~-----~~~~~---------------~~~~~~~~~~r~~~~~ad~i 209 (465)
T PLN02871 158 FGALFYAKL-------LCVPLVMSYHTHVPVY-IP-----RYTFS---------------WLVKPMWDIIRFLHRAADLT 209 (465)
T ss_pred HHHHHHHHH-------hCCCEEEEEecCchhh-hh-----cccch---------------hhHHHHHHHHHHHHhhCCEE
Confidence 23333333 4899999999643210 00 00000 00001123346667899999
Q ss_pred EEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCC
Q 007873 321 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 400 (586)
Q Consensus 321 itvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 400 (586)
+++|+..++.+.+ .+.. ...++.+||||+|.+.|.|..+ ...++.++... .+
T Consensus 210 i~~S~~~~~~l~~---~~~~-----~~~kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~-~~ 261 (465)
T PLN02871 210 LVTSPALGKELEA---AGVT-----AANRIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG-EP 261 (465)
T ss_pred EECCHHHHHHHHH---cCCC-----CcCeEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-CC
Confidence 9999999999885 3321 1238999999999999987542 12234444321 12
Q ss_pred CCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
+.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +.+.++++.... ++.+.+..+.+++..+|+.||++
T Consensus 262 ~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv~ 335 (465)
T PLN02871 262 EKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDVF 335 (465)
T ss_pred CCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCEE
Confidence 458999999999999999999999987 589999999998 567777776543 48888877888899999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc---CcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 557 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 557 (586)
|+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ ++.
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~~ 403 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PEL 403 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HHH
Confidence 9999999999999999999999999999999999999 9999998 999999999999999998 888
Q ss_pred HHHHHHHHH--HhcCCHHHHHHHHHH
Q 007873 558 LAEMMKNGM--AQDLSWKVSIGTVQE 581 (586)
Q Consensus 558 ~~~~~~~~~--~~~fsw~~~a~~~~~ 581 (586)
+++|++++. .++|||+.+++++++
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~ 429 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRN 429 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 899999884 478999999999987
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=328.16 Aligned_cols=358 Identities=16% Similarity=0.236 Sum_probs=260.7
Q ss_pred eEEEEecccc--CccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 86 NILFVGTEVA--PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 86 kIl~v~~~~~--P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
||+|+.++-. |....||++.++.++++.|+ |+|+++|...+.+++.. ...+|+.
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 59 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPEYT---------------------KVNDNCD 59 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCchh---------------------hccCCCc
Confidence 7888766523 22368999999999999995 49999998866555420 1123556
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
++++.-+....+. ..+.+.. ....+.+.++..+...+. .++| |||.|+... +.
T Consensus 60 ~~~~~~~~~~~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~- 112 (380)
T PRK15484 60 IHYIGFSRIYKRL----FQKWTRL-----------DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LY- 112 (380)
T ss_pred eEEEEeccccchh----hhhhhcc-----------CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hH-
Confidence 6655322211100 0000000 111233334443333221 1478 999997432 22
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..++.. +.++|+++++|+... ...+..++.++++
T Consensus 113 ~~~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii~~ 146 (380)
T PRK15484 113 RQIRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKIIVP 146 (380)
T ss_pred HHHHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEEEc
Confidence 222322 268899999996321 1123467999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|++.++.+.+. .+ ..++.+||||+|...|.+.. +..++++++++. +.+
T Consensus 147 S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 194 (380)
T PRK15484 147 SQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DET 194 (380)
T ss_pred CHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CCe
Confidence 99999888752 12 23789999999988887643 345667788764 348
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-------hhHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 474 (586)
+|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|.. .+.+.+++++.+++.++.+.+..+.+++..+|
T Consensus 195 ~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~ 274 (380)
T PRK15484 195 VLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYY 274 (380)
T ss_pred EEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHH
Confidence 89999999999999999999999865 7899999998752 35567777777777778888777888899999
Q ss_pred HhccEEEEcCCC-CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 475 AGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 475 ~~aDi~l~PS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++
T Consensus 275 ~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d- 344 (380)
T PRK15484 275 PLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD- 344 (380)
T ss_pred HhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC-
Confidence 999999999986 99999999999999999999999999999999999954 3789999999999999998
Q ss_pred CHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 554 GTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 554 ~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++. .+|++++. .++|||+.++++|++.++
T Consensus 345 -~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~ 376 (380)
T PRK15484 345 -PEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIH 376 (380)
T ss_pred -HHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 553 67888774 589999999999998764
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=322.97 Aligned_cols=362 Identities=23% Similarity=0.232 Sum_probs=260.0
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++++. |. .||.+.++.+|+++|+++||+|++++...+...... ..++.+
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999972 43 699999999999999999999999987532110000 011111
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
..++.+.+... ....| .......+.+.++. ++|| |||+|.+.....+.
T Consensus 53 ~~~~~~~~~~~-----~~~~~--------------~~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~~ 100 (371)
T cd04962 53 HEVEVPQYPLF-----QYPPY--------------DLALASKIAEVAKR------------YKLD-LLHVHYAVPHAVAA 100 (371)
T ss_pred EEecccccchh-----hcchh--------------HHHHHHHHHHHHhc------------CCcc-EEeecccCCccHHH
Confidence 11111110000 00000 01122333333333 2699 99999766544444
Q ss_pred HHHh-hccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 245 YLKT-MYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 245 ~l~~-~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
++.. ..+. .++|+++++|+..... .+. . .....+.+..++.+|.++++
T Consensus 101 ~~~~~~~~~----~~~~~i~~~h~~~~~~---------~~~--------------~----~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 101 YLAREILGK----KDLPVVTTLHGTDITL---------VGQ--------------D----PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHhcCc----CCCcEEEEEcCCcccc---------ccc--------------c----ccchHHHHHHHhhCCEEEEc
Confidence 4332 2211 3789999999643210 000 0 01123456678899999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+..++.+.+. ++ . ..++.+||||+|...+.+.. ....+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 21 1 23799999999988776543 234456777764 448
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
+++++||+.+.||++.+++|+.++.+ .+++|+|+|+|+ ..+.++++..+.+ +++.+.+. .+++..+++.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGK--QDHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecC--cccHHHHHHhcCEE
Confidence 89999999999999999999999876 579999999997 3455666666554 35666663 34577899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 560 (586)
++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999997 999999999999999998 888888
Q ss_pred HHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 561 MMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 561 ~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
|++++. .++|||+.++++|.+.+.
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 888874 578999999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=331.96 Aligned_cols=274 Identities=20% Similarity=0.225 Sum_probs=221.9
Q ss_pred CCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCc
Q 007873 226 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 226 ~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
.++| +||+|.++.+.....++.... ...|+++++|+...... .. ...
T Consensus 117 ~~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------~~------------------~~~ 163 (406)
T PRK15427 117 FVAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------EV------------------LNH 163 (406)
T ss_pred CCCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------hh------------------hhh
Confidence 3699 999999887766666654211 24467889996432100 00 000
Q ss_pred chhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHH
Q 007873 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (586)
Q Consensus 306 ~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (586)
...+++..++++|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 164 ~~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~----------------- 217 (406)
T PRK15427 164 YTPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK----------------- 217 (406)
T ss_pred hhHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc-----------------
Confidence 1124566788999999999999999885 566655 89999999999988764311
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEE
Q 007873 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 461 (586)
Q Consensus 386 ~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~ 461 (586)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ .++.++++..+++ +++.+
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~ 283 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEM 283 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEE
Confidence 11234679999999999999999999999975 689999999998 5677777777665 46888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCC
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 535 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~ 535 (586)
.+..+.+++.++|+.||++++||.. |++|++++|||+||+|||+|+.||+.|++.++.+|+++ +
T Consensus 284 ~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~ 353 (406)
T PRK15427 284 PGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------P 353 (406)
T ss_pred eCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------C
Confidence 8877888899999999999999974 99999999999999999999999999999999999998 9
Q ss_pred CCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 536 PVDVAAVSTTVRRALA-TYGTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 536 ~~d~~~la~~I~~ll~-~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++|+++|+++|.++++ + ++.+++|++++. .++|+|+.+++++.+.++
T Consensus 354 ~~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 354 ENDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred CCCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999999999999 7 788889999884 589999999999998764
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=341.45 Aligned_cols=320 Identities=17% Similarity=0.197 Sum_probs=223.9
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
.|| +||+|.|.+++++..++..+ ++|.|+|.|.+....... .+...-.....+.. ...
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~~~-~~~~~~~~e~~y~~-------------~~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYPD-SDIYWKKFDDKYHF-------------SCQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhccc-cCCcccccchhhhh-------------hhc
Confidence 499 99999999999999999874 999999999875422210 00000000001000 011
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHH-------hcCccCCCc-chhhh-----hccCeeEecCCcccCCcCCCCcc--ccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YIG 371 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~~i~vI~ngvd~~~~~p~~~~--~~~ 371 (586)
+.....++..||.|++.|......+ .+...+..+ +.+++ -..++.+||+|+|...|.|...+ .+.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2334567889999999998776432 121111111 01110 02388999999999999875421 000
Q ss_pred cccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCC-h------
Q 007873 372 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K------ 442 (586)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~-~------ 442 (586)
.-++. .+....+....++.+|+..+++.++|+++||+.++||++.|++|+.++.+ ++++|+|+|+|. .
T Consensus 546 ~l~n~---I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPS---IEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhccc---chhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 00000 01111223445567887666677899999999999999999999998754 579999999872 1
Q ss_pred hh---HHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcc
Q 007873 443 PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 512 (586)
Q Consensus 443 ~~---~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~~l~-~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 512 (586)
+. .+.+.+++.+++ +++.+.+... .+++..+++ .+|++++||++|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 11 134666666665 4566654322 234445555 5799999999999999999999999999999999999
Q ss_pred cccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH----HhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 513 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll----~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
|+|.+|.+|+++ +|.|+++++++|.+++ ++ ++.+++|+++++ .++|||+.+++++++..
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~D--p~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKED--PSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999998 9999999999998766 45 788999999985 47899999999998743
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=324.10 Aligned_cols=378 Identities=18% Similarity=0.189 Sum_probs=254.6
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
|||||+..||+ ...+|+++|+++||+|+++|+....... .|++++
T Consensus 1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~~--------------------------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPPP--------------------------GGVRVV 45 (396)
T ss_pred CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------CCeeEE
Confidence 69999998754 2567999999999999999987432111 035555
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.+..+..-. ... ..|...+.......+++.+.+..+.. ..++|| |||+|.... .+.+
T Consensus 46 ~~~~~~~~~-------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~pd-vi~~h~~~~--~~~~ 102 (396)
T cd03818 46 RYRPPRGPT-------SGT------HPYLREFEEAVLRGQAVARALLALRA-------KGFRPD-VIVAHPGWG--ETLF 102 (396)
T ss_pred EecCCCCCC-------CCC------CccchhHHHHHHHHHHHHHHHHHHHh-------cCCCCC-EEEECCccc--hhhh
Confidence 443221101 011 11344443333333444444443321 135799 999996432 2334
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
++..+ +++|+|..+|-... . .. ...+....+..... ...............+..+|.++++|+
T Consensus 103 l~~~~------~~~~~v~~~~~~~~-~--~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ad~vi~~s~ 165 (396)
T cd03818 103 LKDVW------PDAPLIGYFEFYYR-A--EG---ADVGFDPEFPPSLD-----DALRLRNRNALILLALAQADAGVSPTR 165 (396)
T ss_pred HHHhC------CCCCEEEEEeeeec-C--CC---CCCCCCCCCCCchh-----HHHHHHHhhhHhHHHHHhCCEEECCCH
Confidence 55443 57899887763211 0 00 00000000000000 000000001113456889999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+. + ..++.+||||+|.+.|.|.... ....+...+++ ++.++|
T Consensus 166 ~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~~~~~i 214 (396)
T cd03818 166 WQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--PGDEVI 214 (396)
T ss_pred HHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--CCCeEE
Confidence 999887641 1 1389999999999999875421 11111122222 345799
Q ss_pred EEEec-CccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-----------hhHHHHHHHHHHC-CCceEEEeccChHHH
Q 007873 406 GFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKFNIPLA 470 (586)
Q Consensus 406 ~~iGr-l~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~-----------~~~~~l~~l~~~~-~~~v~~~~~~~~~~~ 470 (586)
+|+|| ++++||++.+++|++++.+ ++++|+|+|++.. ..+..++++..+. .+++.+.+..+.+++
T Consensus 215 ~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~ 294 (396)
T cd03818 215 TFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQY 294 (396)
T ss_pred EEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHH
Confidence 99998 9999999999999999865 7999999997421 1223344444322 246888888888889
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
..+|+.||++++||..|++|++++||||||+|||+|+.||+.|++.++.+|+++ +++|+++++++|.+++
T Consensus 295 ~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~i~~ll 364 (396)
T cd03818 295 LALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAAVIELL 364 (396)
T ss_pred HHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHH
Q 007873 551 ATYGTQALAEMMKNGM---AQDLSWKVSIGTVQE 581 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~ 581 (586)
++ ++.+.+|+++++ .++|||+.++++|++
T Consensus 365 ~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 365 DD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred hC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 98 788888999885 467999999999874
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=318.64 Aligned_cols=381 Identities=23% Similarity=0.283 Sum_probs=268.6
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
+++++.+...+| ..||++.++.+|+++|+++||+|.|++.......... ....+|+.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 455555544444 3799999999999999999999999997633211100 011234555
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.++...... ... .........+...+...++... .+|| +||+|.+..+..+.
T Consensus 65 ~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~~ 117 (398)
T cd03800 65 VRVPAGPAEY---------LPK-------EELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVAL 117 (398)
T ss_pred EecccccccC---------CCh-------hhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHHH
Confidence 5443211100 000 0000011123334444444321 1599 99999988877776
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
.+.+. .++|+|++.|+........ .. .... ..........+..++.+|.++++|
T Consensus 118 ~~~~~-------~~~~~i~~~h~~~~~~~~~------~~-~~~~------------~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 118 LLARR-------LGIPLVHTFHSLGAVKRRH------LG-AADT------------YEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHhh-------cCCceEEEeecccccCCcc------cc-cccc------------cchhhhhhHHHHHHhhCCEEEEcC
Confidence 66655 4899999999754311100 00 0000 000111234466788999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+..++.+.+. ++.+ ..++.+||||+|...|.+.... ...++..+.+ ++.++
T Consensus 172 ~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 222 (398)
T cd03800 172 PQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGRA-------------------EARRARLLRD--PDKPR 222 (398)
T ss_pred HHHHHHHHHH--cccc------ccccEEECCCCCccceecccch-------------------hhHHHhhccC--CCCcE
Confidence 9998888752 2222 2368999999999888765421 1113444444 34589
Q ss_pred EEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~ 476 (586)
|+|+||+.+.||++.+++|+..+.+ ++++|+++|++... ....++++...++ .++.+.+..+.+++..+++.
T Consensus 223 i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 302 (398)
T cd03800 223 ILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRA 302 (398)
T ss_pred EEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHh
Confidence 9999999999999999999999975 68999999987632 2334555555544 46888888888889999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~ 556 (586)
||++++||..|++|++++|||++|+|||+++.+|..|++.++.+|+++ +++|+++++++|.+++++ ++
T Consensus 303 adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~ 370 (398)
T cd03800 303 ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--PA 370 (398)
T ss_pred CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 999999999999999999999999999999999999999999999998 999999999999999998 88
Q ss_pred HHHHHHHHHHH---hcCCHHHHHHHHHH
Q 007873 557 ALAEMMKNGMA---QDLSWKVSIGTVQE 581 (586)
Q Consensus 557 ~~~~~~~~~~~---~~fsw~~~a~~~~~ 581 (586)
.+++|++++.+ ++|||+.++++|++
T Consensus 371 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 398 (398)
T cd03800 371 LRRRLSRAGLRRARARYTWERVAARLLE 398 (398)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 88999998853 89999999999864
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=318.59 Aligned_cols=377 Identities=15% Similarity=0.101 Sum_probs=238.1
Q ss_pred CCceEEEEeccccCccccchHHHHhhhhHHHHHhCC-CeEEEEEecCCCccc--cCCcceEEEEEeCCeeeEEEEEEEEe
Q 007873 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCHK 159 (586)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vvt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (586)
++|||++++..|.|| .+|+...+..++..|+++| |+|++|+|.++.-.+ .+.. ++.+....++..+.+..
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~----~~~f~~~~~~e~~~~~~- 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPN----KITFSSPSEQEAYVRQW- 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccc----cccccCchhhhhhhhhh-
Confidence 579999999999998 9999999999999999999 899999998642111 0110 00000000000000000
Q ss_pred CCceEEEEcCccccccccCCCCCcccCCCCCCCCcchh---HHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecC
Q 007873 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236 (586)
Q Consensus 160 ~gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~ 236 (586)
.+-.++++....+. .| .+.+ .+.......+.+.++. ++|| |||.|+
T Consensus 76 ~~~~v~r~~s~~~p----------~y--------p~r~~~~~r~~~~~~~i~~~l~~------------~~pD-VIHv~t 124 (462)
T PLN02846 76 LEERISFLPKFSIK----------FY--------PGKFSTDKRSILPVGDISETIPD------------EEAD-IAVLEE 124 (462)
T ss_pred ccCeEEEecccccc----------cC--------cccccccccccCChHHHHHHHHh------------cCCC-EEEEcC
Confidence 01112222211110 01 1100 0111112233344443 3699 999987
Q ss_pred -CccchH--HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCC-CCCcCCcchhhhhH
Q 007873 237 -WHTSLI--PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY-NKPVRGRKINWMKA 312 (586)
Q Consensus 237 -~~~~~~--~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 312 (586)
++.+.+ +..+... .++ +|.+.|.-.. . | +...+. +. ...+.....+|+++
T Consensus 125 P~~LG~~~~g~~~~~k-------~~~-vV~tyHT~y~-~-Y----~~~~~~------------g~~~~~l~~~~~~~~~r 178 (462)
T PLN02846 125 PEHLTWYHHGKRWKTK-------FRL-VIGIVHTNYL-E-Y----VKREKN------------GRVKAFLLKYINSWVVD 178 (462)
T ss_pred chhhhhHHHHHHHHhc-------CCc-EEEEECCChH-H-H----HHHhcc------------chHHHHHHHHHHHHHHH
Confidence 333443 2222221 234 8889996321 0 0 000000 00 00001112233322
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
. .+|.++++|+...+ +.+ .+...++|+|.+.|.|.... +++
T Consensus 179 ~--~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~~---------------------~~~ 219 (462)
T PLN02846 179 I--YCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKLK---------------------LEQ 219 (462)
T ss_pred H--hcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCccc---------------------Hhh
Confidence 2 48999999986655 443 34445689999988876421 222
Q ss_pred HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHH
Q 007873 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (586)
..+ +.+.-.+.++|+||+.++||++.|++|++++.+ ++++|+|+|+|+ .++.+++++.+++.++..+..+...
T Consensus 220 ~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~-- 294 (462)
T PLN02846 220 QKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHA-- 294 (462)
T ss_pred hcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCH--
Confidence 222 222113579999999999999999999998865 689999999999 6777888888776434344444332
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
..+++.+|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.+ .|+++++++|.+++
T Consensus 295 ~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l 361 (462)
T PLN02846 295 DPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKAL 361 (462)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHH
Confidence 2599999999999999999999999999999999999998 5999999999975 68999999999999
Q ss_pred HhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC
Q 007873 551 ATYGTQALAEMMKNGMAQDLSWKVSIGTVQEEDSL 585 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (586)
++. + .+++..+ .+.|||+.+++++++.+++
T Consensus 362 ~~~-~---~~~~~~a-~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 362 AEE-P---APLTDAQ-RHELSWEAATERFLRVADL 391 (462)
T ss_pred ccC-c---hhHHHHH-HHhCCHHHHHHHHHHHhcc
Confidence 862 2 2223333 3699999999999998764
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=314.19 Aligned_cols=229 Identities=16% Similarity=0.167 Sum_probs=185.9
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (586)
+.+..++.+|.|+++|+..++.+.+. ++.. ....+.+|+||+|.+.|.|.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c
Confidence 34566889999999999999988752 2211 11245699999999888765321 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc-----CCeEEEEEeCCCh------hhHHHHHHHHHH-C-
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 455 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-----~~v~lvIvG~g~~------~~~~~l~~l~~~-~- 455 (586)
.+.....+ ++.++|+++||+.+.||++.+++|++++.+ ++++|+|+|+|+. .+.+.++++..+ +
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11122222 345899999999999999999999999864 4899999999863 234677777766 3
Q ss_pred -CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCC
Q 007873 456 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534 (586)
Q Consensus 456 -~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 534 (586)
.+++.+.+..+.+++..+++.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357898888888888999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHH
Q 007873 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTV 579 (586)
Q Consensus 535 ~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~ 579 (586)
++ |+++++++|.+++++ ++.+++|++++. .++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 65 999999999999998 778888999884 5889999998864
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=300.90 Aligned_cols=328 Identities=18% Similarity=0.192 Sum_probs=236.2
Q ss_pred ceEEEEeccccC--ccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCc
Q 007873 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (586)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (586)
|||++|++.+.| ....||.++++.+|+.+|.++||+|.++++........ ..
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~~--------- 54 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------LV--------- 54 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------ee---------
Confidence 899999998744 23589999999999999999999999999863211100 00
Q ss_pred eEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchH
Q 007873 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (586)
Q Consensus 163 ~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~ 242 (586)
. ......... +.............+.+.++. .+|| |||+|.+...+.
T Consensus 55 ~--~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~~ 101 (335)
T cd03802 55 P--VVPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPLP 101 (335)
T ss_pred e--ccCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccchh
Confidence 0 000000000 000000111122222233322 2699 999999877665
Q ss_pred HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 243 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
+... .++|+++++|+..... ...........+.+++
T Consensus 102 ---~~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 137 (335)
T cd03802 102 ---FARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFVS 137 (335)
T ss_pred ---hhcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEEE
Confidence 2221 5889999999754310 0112334567889999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+|+..++.+.. . .++.+||||+|.+.|.+.. .+.
T Consensus 138 ~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~~ 171 (335)
T cd03802 138 ISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PKG 171 (335)
T ss_pred ecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CCC
Confidence 99998887663 1 2899999999998887532 134
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHH---CCCceEEEeccChHHHHHHHHhccE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~---~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
..|+|+||+.+.||++.+++++.+. +++|+|+|.|.. ...+...... ..+++.+.+..+.+++..+++.+|+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 6899999999999999999998764 799999999973 2222222222 2467999988888888899999999
Q ss_pred EEEcCCC-CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHH
Q 007873 480 ILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (586)
Q Consensus 480 ~l~PS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 558 (586)
+++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. ..
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~~-- 310 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--DR-- 310 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--HH--
Confidence 9999985 99999999999999999999999999999999999997 44 99999999998764 21
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHh
Q 007873 559 AEMMKNGMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 559 ~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (586)
+..++...++|||+.++++|++.+
T Consensus 311 -~~~~~~~~~~~s~~~~~~~~~~~y 334 (335)
T cd03802 311 -AACRRRAERRFSAARMVDDYLALY 334 (335)
T ss_pred -HHHHHHHHHhCCHHHHHHHHHHHh
Confidence 222333569999999999999865
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=310.13 Aligned_cols=356 Identities=18% Similarity=0.186 Sum_probs=248.4
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCC-CccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
-||++|...+ ..||++.++.+|+++|.+.||++.+++.... .+... ....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~----------------------~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKR----------------------IQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHH----------------------HHhcCce
Confidence 4899998764 3699999999999999999999999984321 11110 0112455
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
++.+..+.. + ++ .+...+.+.++.. +|| |||+|...+. ..
T Consensus 56 ~~~~~~~~~--~--------------------~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~-~~ 95 (374)
T TIGR03088 56 FYALHKQPG--K--------------------DV----AVYPQLYRLLRQL------------RPD-IVHTRNLAAL-EA 95 (374)
T ss_pred EEEeCCCCC--C--------------------Ch----HHHHHHHHHHHHh------------CCC-EEEEcchhHH-HH
Confidence 554421100 0 00 1222333444433 599 9999975432 22
Q ss_pred HHHHhhccCCCCCCCceE-EEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhH-HhhcCCEEE
Q 007873 244 CYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA-GILESDMVL 321 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pv-v~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~vi 321 (586)
.+..+. .+.|+ +++.|....... .. ......++++ ....+|.++
T Consensus 96 ~~~~~~-------~~~~~~i~~~h~~~~~~~-----------~~----------------~~~~~~~~~~~~~~~~~~~i 141 (374)
T TIGR03088 96 QLPAAL-------AGVPARIHGEHGRDVFDL-----------DG----------------SNWKYRWLRRLYRPLIHHYV 141 (374)
T ss_pred HHHHHh-------cCCCeEEEeecCcccccc-----------hh----------------hHHHHHHHHHHHHhcCCeEE
Confidence 222222 24443 444453211000 00 0011234433 334689999
Q ss_pred EeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCC
Q 007873 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (586)
Q Consensus 322 tvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 401 (586)
++|+..++.+.+ .++++.+ ++.+|+||+|.+.|.|.... +...++....+ ++
T Consensus 142 ~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~~ 193 (374)
T TIGR03088 142 AVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--DE 193 (374)
T ss_pred EeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--CC
Confidence 999999998875 2455433 89999999999888765321 11222222222 34
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHH
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 473 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~ 473 (586)
.++|+++||+.++||++.+++|+.++.+ ++++|+++|+|+ ..+.++++..+++ .++.+.+ ..++...+
T Consensus 194 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g--~~~~~~~~ 269 (374)
T TIGR03088 194 SVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG--ERDDVPAL 269 (374)
T ss_pred CeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC--CcCCHHHH
Confidence 5899999999999999999999998854 279999999997 4566777766654 2333333 24567789
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 474 l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
++.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 270 ~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~- 338 (374)
T TIGR03088 270 MQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD- 338 (374)
T ss_pred HHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999998 999999999999999998
Q ss_pred CHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 554 GTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 554 ~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++.+.++++++. .++|||+.++++|++.+.
T Consensus 339 -~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~ 371 (374)
T TIGR03088 339 -PAARRAHGAAGRARAEQQFSINAMVAAYAGLYD 371 (374)
T ss_pred -HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 778888888874 579999999999998764
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=321.50 Aligned_cols=470 Identities=19% Similarity=0.245 Sum_probs=353.3
Q ss_pred eEEEEecccc-----CccccchHHHHhhhhHHHHHhCCCeEEEEEecCCC-ccc--------------cC----------
Q 007873 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YKD--------------AW---------- 135 (586)
Q Consensus 86 kIl~v~~~~~-----P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~-~~~--------------~~---------- 135 (586)
-+++++.||. |- ..||+|...+...++++..|....-++..|.+ |.. .|
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 4448887754 42 58999999999999999999999999877642 111 11
Q ss_pred ----CcceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccccccCCCCC-cccCCCCCCCCcchhHH---HHHHHHHH
Q 007873 136 ----DTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAA 207 (586)
Q Consensus 136 ----~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~~~-~~y~~~~~~~~~~~~~~---~~~~~~~~ 207 (586)
.....+.+.+.++...++..+....++++++++++.+-+..|.+... .+|++ |+..| +.+|+.+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGG 238 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHH
Confidence 11235566777777778888888889999999998753333333332 47863 35566 58999999
Q ss_pred HHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH-----HHHhh-ccCCC--CCCCceEEEEEcCCcccc--ccCcc
Q 007873 208 LEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-----YLKTM-YKPKG--MYKSAKVVFCIHNIAYQG--RFAFE 277 (586)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~-----~l~~~-~~~~~--~~~~~pvv~~iH~~~~~~--~~~~~ 277 (586)
+++++.+.+ .|| |||+||||++++++ ++... +.... -..+.+++||+|++.++| .|+..
T Consensus 239 l~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 239 VRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 999988764 499 99999999999998 54321 10000 012578999999999999 89877
Q ss_pred cccc--------cCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHH---HHHHhcCccCCCcchhhhh
Q 007873 278 DFGL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 346 (586)
Q Consensus 278 ~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~---~~~l~~~~~~g~~~~~~~~ 346 (586)
.+.. ++++.+....+....... ....+++++.++..|+.+.+||+-+ .+++......|.+++
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~---- 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE---- 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----
Confidence 7632 566654433222111100 0124799999999999999999987 555554223444432
Q ss_pred ccCeeEecCCcccCCcC-CCCccccccccC---------------------ccccccccHHHHHHHHHHh----------
Q 007873 347 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 394 (586)
Q Consensus 347 ~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~---------- 394 (586)
..++..|.||||...|. |..++.+ -+|. +....+.+..+|..|++.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34799999999999998 7766654 2331 2223356777777776664
Q ss_pred -----------CCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC------hhhHHHHHHH
Q 007873 395 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 451 (586)
Q Consensus 395 -----------gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~------~~~~~~l~~l 451 (586)
+.+.+++.++|+|++|+.++||.+++++.+.++.+ .++||||+|++. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55567788999999999999999999999888744 479999999987 5667788888
Q ss_pred HH--HCCCceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEcc-
Q 007873 452 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS- 526 (586)
Q Consensus 452 ~~--~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~- 526 (586)
+. .+++++.+...|+...++.++++||++++||+ +|+||++.+-||..|.+-+++..|...|.. ++.|||.+|.
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 87 67779999999999999999999999999999 999999999999999999999999999998 7899999974
Q ss_pred -ccccccCCCCCCHHHHHHHHHHHHH-hc-C------HHHHHHHHHHHHHh---cCCHHHHHHHHHHHh
Q 007873 527 -FSVDCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKVSIGTVQEED 583 (586)
Q Consensus 527 -~~~~~~~v~~~d~~~la~~I~~ll~-~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~~ 583 (586)
...|-+.-+..|+++|.+.|++.+- .+ . +..+.+|.+++|++ +|||+.++++|.+..
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 2233444556788999999976554 22 1 45789999999977 999999999999864
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=302.11 Aligned_cols=274 Identities=18% Similarity=0.150 Sum_probs=204.9
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+|| |||+|++....++...+ . .++|+|++.|+..... ....
T Consensus 85 ~~D-vv~~h~~~~~~~~~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~ 125 (372)
T cd03792 85 DAD-VVVIHDPQPLALPLFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRV 125 (372)
T ss_pred CCC-EEEECCCCchhHHHhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHH
Confidence 699 99999987544333222 1 3789999999633100 0012
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
+.+++..+..+|.+++.|+.+.. .+++. .++ +||||+|+....... ..+..
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~---------------~~~~~ 176 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE---------------LSPAD 176 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhcC-------CCCCC------ceE-EeCCCCCCCccccCC---------------CCHHH
Confidence 34567778899999988843321 22321 244 999999965311100 11223
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHH--CCCce
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEKA 459 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~---~~~~~l~~l~~~--~~~~v 459 (586)
...+++++|++. +.++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+. ...+.++++... ...++
T Consensus 177 ~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 177 IEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCe
Confidence 456777888864 45899999999999999999999998865 6899999999863 223334444432 33457
Q ss_pred EEEecc--ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCC
Q 007873 460 RGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537 (586)
Q Consensus 460 ~~~~~~--~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~ 537 (586)
.+.+.. +.+++..+++.||++++||.+|+||++++|||+||+|||+|+.||+.+++.++.+|+++ +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~-- 322 (372)
T cd03792 255 HVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D-- 322 (372)
T ss_pred EEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C--
Confidence 666655 67888899999999999999999999999999999999999999999999999999986 3
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 538 DVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 538 d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++++++.+|.+++++ ++.+++|++++. .++|||+.++++|++.++
T Consensus 323 ~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 323 TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLIS 370 (372)
T ss_pred CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 567899999999988 888899998884 478999999999998764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=295.86 Aligned_cols=355 Identities=17% Similarity=0.175 Sum_probs=244.3
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+..++|. ..||+++++.+|+++|.++||+|.|+++....... ....+|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 789998765443 48999999999999999999999999976321110 1122466666
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.++.+.... ...+..-....+...+ . ++| ++|.|.+.....+..
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~--~-----------~~~-~~~i~~~~~~~~~~~ 101 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF--V-----------KRD-IDHVHALGPAIAPFL 101 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh--c-----------cCC-eEEEEecCccHHHHH
Confidence 554321000 0000011111111111 1 244 444443332222222
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchh-hhhHHhhcCCEEEEeC
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLTVS 324 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ad~vitvS 324 (586)
..... .+.|+++++|+..+... ..+ .+ ...... ..+..++.+|.++++|
T Consensus 102 ~~~~~------~~~~~v~~~h~~~~~~~---------~~~--------------~~-~~~~~~~~~~~~~~~ad~ii~~s 151 (363)
T cd04955 102 PLLRL------KGKKVVVNMDGLEWKRA---------KWG--------------RP-AKRYLKFGEKLAVKFADRLIADS 151 (363)
T ss_pred HHHHh------cCCCEEEEccCcceeec---------ccc--------------cc-hhHHHHHHHHHHHhhccEEEeCC
Confidence 11111 37899999997543110 000 00 001122 2355678999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+..++.+.. .+|.+ . .+||||+|...+.+. ...++..+++ +.+.
T Consensus 152 ~~~~~~~~~--~~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~~ 195 (363)
T cd04955 152 PGIKEYLKE--KYGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGRY 195 (363)
T ss_pred HHHHHHHHH--hcCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCcE
Confidence 999999864 24432 3 899999998766441 1233445554 2356
Q ss_pred EEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
++|+||+.+.||++.+++|+.++.. +++|+|+|+|+ ..+.+.+++. ....+++.+.+..+.+++..+++.||++++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 273 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFYL 273 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEEe
Confidence 8899999999999999999999864 89999999985 2344444421 233457888888888888899999999999
Q ss_pred cCCC-CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 007873 483 PSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 483 PS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|+ +++.|.+++++ ++.+.++
T Consensus 274 ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~~ 337 (363)
T cd04955 274 HGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSAM 337 (363)
T ss_pred CCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHHH
Confidence 9999 9999999999999999999999999999987 78877 77665 99999999998 7888888
Q ss_pred HHHHH---HhcCCHHHHHHHHHHHh
Q 007873 562 MKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 562 ~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++++. .++|||+.++++|++.+
T Consensus 338 ~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 338 AKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 88874 46799999999999865
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=300.10 Aligned_cols=272 Identities=21% Similarity=0.270 Sum_probs=216.4
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+|| +||+|....+.....+.+. .++|+++++|+........ .... . + +...
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~---~~~~---~--------------~-~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLA---LLLR---S--------------R-WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccch---hhcc---c--------------c-hhHH
Confidence 699 9999976655555444443 4899999999643211000 0000 0 0 0111
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
....+..++.+|.++++|+..++.+.+ +|++.+ ++.+++||+|.+.+.|...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 233456678999999999999999886 465544 8999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEE
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 462 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~--~~~v~~~ 462 (586)
..+.++++|+|++.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..++ ..++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999875 689999999987 556777777763 4578888
Q ss_pred eccChHHHHHHHHhccEEEEcCC------CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCC
Q 007873 463 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 536 (586)
+..+.+++..+++.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 77788889999999999999997 499999999999999999999999999999999999998 89
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHH
Q 007873 537 VDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQE 581 (586)
Q Consensus 537 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~ 581 (586)
+|+++++++|.+++++ ++.+.+|++++. .++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999998 788888888874 578999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=290.80 Aligned_cols=361 Identities=20% Similarity=0.262 Sum_probs=265.6
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
++|+.|+..|+|. .||++..++.|.+.|-+.||.|.++|..|.... .+| ...+|.++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~------------------gir---ylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRV------------------GIR---YLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCcc------------------cee---eecCCceE
Confidence 5899999999996 999999999999999999999999998864321 122 33467899
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
|+++-...++. .|-..+|+... ++ +..+ ++. +.. |||.|.-.+.+.--
T Consensus 58 yylp~~v~~n~---tT~ptv~~~~P------------ll-r~i~--lrE-------------~I~-ivhghs~fS~lahe 105 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFSDFP------------LL-RPIL--LRE-------------RIE-IVHGHSPFSYLAHE 105 (426)
T ss_pred EEEeeeeeecc---cchhhhhccCc------------cc-chhh--hhh-------------ceE-EEecCChHHHHHHH
Confidence 98876655443 23334443211 11 1111 111 245 99998766665543
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
.+.... ..|.++|||-|.+ |.+++++..- .-+.+...+.+.|++||+|
T Consensus 106 ~l~har-----tMGlktVfTdHSl-----fGfad~~si~----------------------~n~ll~~sL~~id~~IcVs 153 (426)
T KOG1111|consen 106 ALMHAR-----TMGLKTVFTDHSL-----FGFADIGSIL----------------------TNKLLPLSLANIDRIICVS 153 (426)
T ss_pred HHHHHH-----hcCceEEEecccc-----ccccchhhhh----------------------hcceeeeeecCCCcEEEEe
Confidence 332221 2488999999964 3333332110 0123345577899999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
...++...-+ -.++ +.++.+|||.++...|.|...+ - ...+...
T Consensus 154 htskentvlr--~~L~------p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~~ 197 (426)
T KOG1111|consen 154 HTSKENTVLR--GALA------PAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADIIT 197 (426)
T ss_pred ecCCCceEEE--eccC------HhHeeeccceeeccccccCccc---------------------------c-CCCCeeE
Confidence 9888776632 2333 4499999999999999995421 0 2234478
Q ss_pred EEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCCh--hhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
|+.++||-++||+|.|+++++++.+ |+++|+|+|+|++ .+++.+++.. +++.+...+..+.+++.+.|...|+|
T Consensus 198 ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~--l~~rV~~lG~v~h~~Vr~vl~~G~IF 275 (426)
T KOG1111|consen 198 IVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLF--LQDRVVMLGTVPHDRVRDVLVRGDIF 275 (426)
T ss_pred EEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhh--ccCceEEecccchHHHHHHHhcCcEE
Confidence 9999999999999999999999987 8999999999994 3555555554 34569999999999999999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 560 (586)
++||..|.||++++|||+||+|||++++||++|++.++ .-+ ..+.++++++++++++++..++ ..+
T Consensus 276 lntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~-----------~~~~~~~dl~~~v~~ai~~~~~--~p~ 341 (426)
T KOG1111|consen 276 LNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MIT-----------LGEPGPDDLVGAVEKAITKLRT--LPL 341 (426)
T ss_pred eccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-cee-----------ccCCChHHHHHHHHHHHHHhcc--Cch
Confidence 99999999999999999999999999999999999886 222 2677899999999999987322 112
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 561 MMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 561 ~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
--.+.+.+.|+|+.++++.++.+.
T Consensus 342 ~~h~~v~~~y~w~dVa~rTekvy~ 365 (426)
T KOG1111|consen 342 EFHDRVKKMYSWKDVAERTEKVYD 365 (426)
T ss_pred hHHHHHHHhccHHHHHHHHHHHHH
Confidence 223446788999999999988653
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=296.11 Aligned_cols=338 Identities=22% Similarity=0.251 Sum_probs=244.0
Q ss_pred ccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccccccC
Q 007873 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178 (586)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~ 178 (586)
..||++.++.+|+++|+++||+|.++++.... .... ...|++++.+... ..
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~----------------------~~~~~~~~~~~~~--~~---- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL-VAEL----------------------EAEGSRHIKLPFI--SK---- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch-HHHH----------------------HhcCCeEEEcccc--cc----
Confidence 45999999999999999999999999875221 1100 0113333322100 00
Q ss_pred CCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCCCCCC
Q 007873 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKS 258 (586)
Q Consensus 179 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~ 258 (586)
. ..........+...++. ++|| +||+|.........+.... .+
T Consensus 59 ----~-------------~~~~~~~~~~l~~~~~~------------~~~d-ii~~~~~~~~~~~~~~~~~-------~~ 101 (355)
T cd03819 59 ----N-------------PLRILLNVARLRRLIRE------------EKVD-IVHARSRAPAWSAYLAARR-------TR 101 (355)
T ss_pred ----c-------------hhhhHHHHHHHHHHHHH------------cCCC-EEEECCCchhHHHHHHHHh-------cC
Confidence 0 00011111222233332 2699 9999987665555444433 48
Q ss_pred ceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCC
Q 007873 259 AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338 (586)
Q Consensus 259 ~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g 338 (586)
+|+++++|+..... .+.+..+..+|.++++|+..++.+.. .++
T Consensus 102 ~~~i~~~h~~~~~~-----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~~--~~~ 144 (355)
T cd03819 102 PPFVTTVHGFYSVN-----------------------------------FRYNAIMARGDRVIAVSNFIADHIRE--NYG 144 (355)
T ss_pred CCEEEEeCCchhhH-----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHHH--hcC
Confidence 99999999653200 13445577899999999999999884 366
Q ss_pred CcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHH
Q 007873 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSD 418 (586)
Q Consensus 339 ~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d 418 (586)
++.+ ++.+||||+|...|.+.... ......++++++++. +.++|+|+||+.++||++
T Consensus 145 ~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~~~i~~~Gr~~~~Kg~~ 201 (355)
T cd03819 145 VDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLPK--GKPVILLPGRLTRWKGQE 201 (355)
T ss_pred CChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCCC--CceEEEEeeccccccCHH
Confidence 6544 89999999999888664321 111223677777654 458999999999999999
Q ss_pred HHHHHHhhccc--CCeEEEEEeCCCh--hhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEEEEcC-CCCCCcH
Q 007873 419 ILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCGL 491 (586)
Q Consensus 419 ~Ll~A~~~l~~--~~v~lvIvG~g~~--~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~l~PS-~~E~~gl 491 (586)
.+++++..+.+ ++++|+|+|.++. .+.+.+.+...+++ +++.+.+. .+++..+++.||++++|| .+|++|+
T Consensus 202 ~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~ 279 (355)
T cd03819 202 VFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGR 279 (355)
T ss_pred HHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCch
Confidence 99999999977 6899999999863 34445555555443 35666655 456778999999999999 7899999
Q ss_pred HHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---Hh
Q 007873 492 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQ 568 (586)
Q Consensus 492 ~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~ 568 (586)
+++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|..++... ++.+.+++++++ .+
T Consensus 280 ~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 280 TAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 9999999999997666532 677788888874 68
Q ss_pred cCCHHHH
Q 007873 569 DLSWKVS 575 (586)
Q Consensus 569 ~fsw~~~ 575 (586)
+|||+.+
T Consensus 349 ~f~~~~~ 355 (355)
T cd03819 349 LFSYDRM 355 (355)
T ss_pred hhhhccC
Confidence 9999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=304.57 Aligned_cols=375 Identities=15% Similarity=0.145 Sum_probs=232.8
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
||||+|...+ ..||+|.++.+|++.|.++||+|.++..+......... .+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 8999999753 47999999999999999999999999987432211000 001111
Q ss_pred EEEcCcc-------ccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCC
Q 007873 165 VFVDHPW-------FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 237 (586)
Q Consensus 165 ~~v~~~~-------~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~ 237 (586)
.....+. ...|..++ ..+....++.+.+.. .++|| |||.|..
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~i~~--------~~~pD-viHlH~~ 103 (405)
T PRK10125 55 VIKHTPRMTAMANIALFRLFNR----------------------DLFGNFNELYRTITR--------TPGPV-VLHFHVL 103 (405)
T ss_pred EEEecccHHHHHHHHHHHhcch----------------------hhcchHHHHHHHHhh--------ccCCC-EEEEecc
Confidence 1111111 11110000 011111111111110 24699 9999998
Q ss_pred ccchHHHH--HHh--hccCCCCCCCceEEEEEcCCcc-ccccCcccccccCCChhhcccc-cc--ccCCCCCc-------
Q 007873 238 HTSLIPCY--LKT--MYKPKGMYKSAKVVFCIHNIAY-QGRFAFEDFGLLNLPAQFKSSF-DF--IDGYNKPV------- 302 (586)
Q Consensus 238 ~~~~~~~~--l~~--~~~~~~~~~~~pvv~~iH~~~~-~~~~~~~~~~~~~l~~~~~~~~-~~--~~~~~~~~------- 302 (586)
+...+... .+. ..+.+ ..++|+|+|+|+.+. .|.+.... . ...|...+ .+ ..++.+..
T Consensus 104 ~~~~~~~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~-~----C~~~~~~c~~Cp~l~~~~~~~~d~~~~~ 176 (405)
T PRK10125 104 HSYWLNLKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTD-G----CEGWKTGCQKCPTLNNYPPVKVDRAHQL 176 (405)
T ss_pred cCceecHHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCc-c----cccccccCCCCCCccCCCCCccchHHHH
Confidence 87543321 111 00000 157899999999764 23333211 0 11121111 11 11111100
Q ss_pred CCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccc
Q 007873 303 RGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 382 (586)
Q Consensus 303 ~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~ 382 (586)
+.++..+.+.....++.++++|+++++.+.+. ++ ..++.+||||+|++.+.+....
T Consensus 177 ~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~--------~~~i~vI~NGid~~~~~~~~~~-------------- 232 (405)
T PRK10125 177 VAGKRQLFREMLALGCQFISPSQHVADAFNSL--YG--------PGRCRIINNGIDMATEAILAEL-------------- 232 (405)
T ss_pred HHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cC--------CCCEEEeCCCcCcccccccccc--------------
Confidence 11122223334445789999999999988752 33 2389999999997543322100
Q ss_pred cHHHHHHHHHHhCCCCCCCCcEEEEEecC--ccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceE
Q 007873 383 KPLLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460 (586)
Q Consensus 383 ~~~~~~~l~~~~gl~~~~~~~~i~~iGrl--~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~ 460 (586)
...+ ..++.++|+++|+. .+.||++.|++|+.++. ++++|+|+|+|+... ..++.
T Consensus 233 -----~~~~------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~ 289 (405)
T PRK10125 233 -----PPVR------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVV 289 (405)
T ss_pred -----cccc------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceE
Confidence 0000 11245789999994 47899999999999984 689999999986311 12355
Q ss_pred EEecc-ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCH
Q 007873 461 GVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539 (586)
Q Consensus 461 ~~~~~-~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~ 539 (586)
..+.. +..++..+|+.||++|+||++|+||++++||||||+|||+|++||++|++.++ +|+++ +++|+
T Consensus 290 ~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~ 358 (405)
T PRK10125 290 NHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEV 358 (405)
T ss_pred EecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCH
Confidence 55443 45677889999999999999999999999999999999999999999999875 99998 99999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHhc
Q 007873 540 AAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 540 ~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (586)
++||+.+...+.+ ..+.++..++ ..+.|||+.++++|++.+.
T Consensus 359 ~~La~~~~~~~~~---~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 359 LQLAQLSKPEIAQ---AVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred HHHHhccCHHHHH---HhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999865433222 1111111222 3678999999999998754
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=292.67 Aligned_cols=359 Identities=24% Similarity=0.275 Sum_probs=254.3
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+..|+|. .||.+.++..|+++|+++||+|.++++.......... +.+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 6999999999999999999999999986432111000 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccc-hHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS-LIPC 244 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~-~~~~ 244 (586)
....+.+.. ... ... ......+.++. ++|| +||+|..... ....
T Consensus 56 ~~~~~~~~~-------~~~-----------~~~----~~~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~~ 100 (364)
T cd03814 56 SVPLPGYPE-------IRL-----------ALP----PRRRVRRLLDA------------FAPD-VVHIATPGPLGLAAL 100 (364)
T ss_pred ccccCcccc-------eEe-----------ccc----chhhHHHHHHh------------cCCC-EEEEeccchhhHHHH
Confidence 000000000 000 000 00111112222 2699 7777754322 2222
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
.+.+. .++|+++++|+...+-. ... .. .+.........+..++.+|.++++|
T Consensus 101 ~~~~~-------~~~~~i~~~~~~~~~~~------~~~-~~--------------~~~~~~~~~~~~~~~~~~d~i~~~s 152 (364)
T cd03814 101 RAARR-------LGIPVVTSYHTDFPEYL------RYY-GL--------------GPLSWLAWAYLRWFHNRADRVLVPS 152 (364)
T ss_pred HHHHH-------cCCCEEEEEecChHHHh------hhc-cc--------------chHhHhhHHHHHHHHHhCCEEEeCC
Confidence 22222 48999999997543110 000 00 0000011244566788999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+...+.+.. .+.+ ++.+++||+|...|.|... +...+++++ + .+.++
T Consensus 153 ~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~-~--~~~~~ 199 (364)
T cd03814 153 PSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG-P--PDRPV 199 (364)
T ss_pred HHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC-C--CCCeE
Confidence 999986654 2222 7899999999988876542 122334444 2 34579
Q ss_pred EEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEc
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~P 483 (586)
|+|+|++.+.||++.+++++.++.+ ++++|+|+|.|+. ...++ ....++.+.+..+.+++..+++.||++++|
T Consensus 200 i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~ 273 (364)
T cd03814 200 LLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFP 273 (364)
T ss_pred EEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 9999999999999999999999976 5899999999873 33333 334568888877888899999999999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Q 007873 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 563 (586)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~ 563 (586)
|..|+||++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++++ ++.+.+|++
T Consensus 274 s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~~ 341 (364)
T cd03814 274 SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMAA 341 (364)
T ss_pred cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 99999999999999999999999999999999999999998 999999999999999998 888889998
Q ss_pred HHHH--hcCCHHHHHHHHHHHh
Q 007873 564 NGMA--QDLSWKVSIGTVQEED 583 (586)
Q Consensus 564 ~~~~--~~fsw~~~a~~~~~~~ 583 (586)
++.. ++|+|+.+++++++.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 342 RARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHhhcCHHHHHHHHHHhh
Confidence 8853 6899999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=292.66 Aligned_cols=382 Identities=19% Similarity=0.206 Sum_probs=262.0
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+..++|. .||.+.++..++++|+++||+|.++++............ ......+|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998885 499999999999999999999999997632211110000 111223456655
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCC-ccchHH-
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIP- 243 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~-~~~~~~- 243 (586)
.+........ . +......+..+.......... .. .+|| +|++|.+ .....+
T Consensus 64 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~-~~---------~~~D-~v~~~~~~~~~~~~~ 116 (394)
T cd03794 64 RVPLPPYKKN-------G---------LLKRLLNYLSFALSALLALLK-RR---------RRPD-VIIATSPPLLIALAA 116 (394)
T ss_pred EEecCCCCcc-------c---------hHHHHHhhhHHHHHHHHHHHh-cc---------cCCC-EEEEcCChHHHHHHH
Confidence 5432211110 0 101111222222222222221 11 2699 7888763 222233
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..+++. .++|+++++|+..+......... .. ..........+.+..+..+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~~~~~-----~~------------~~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 117 LLLARL-------KGAPFVLEVRDLWPESAVALGLL-----KN------------GSLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHh-------cCCCEEEEehhhcchhHHHccCc-----cc------------cchHHHHHHHHHHHHHhcCCEEEEE
Confidence 233332 48999999998654221100000 00 0000011223446678899999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+..++.+.. .+.+ ..++.++|||+|...+.+.... .. +..... ..+.+
T Consensus 173 s~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVP------PEKISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCC------cCceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCcE
Confidence 9999999873 3433 2389999999998877665421 01 222222 23568
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHC-CCceEEEeccChHHHHHHHHhccEEE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+|+|+|++.++||++.+++|+.++.+ ++++|+|+|+|. ..+.++++.... ..++...+..+.+++..+++.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 99999999999999999999999976 489999999987 344455543322 24688888778888999999999999
Q ss_pred EcCCCCCC-----cHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHH
Q 007873 482 IPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (586)
Q Consensus 482 ~PS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~ 556 (586)
+|+..|++ |++++|||++|+|||+++.++..+.+.++.+|+++ +++|+++++++|.+++++ ++
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~ 367 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PE 367 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99998875 88899999999999999999999999999999998 899999999999999988 88
Q ss_pred HHHHHHHHHH---HhcCCHHHHHHHHH
Q 007873 557 ALAEMMKNGM---AQDLSWKVSIGTVQ 580 (586)
Q Consensus 557 ~~~~~~~~~~---~~~fsw~~~a~~~~ 580 (586)
.++++++++. .++|||+.++++|+
T Consensus 368 ~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 368 ERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 8888888874 46999999999874
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=293.17 Aligned_cols=349 Identities=18% Similarity=0.210 Sum_probs=249.8
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++++.. +. .||.++++..++++|.++||+|.+++....
T Consensus 1 MkIl~~~~~--~~--~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--DI--SGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--CC--CCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 32 699999999999999999999999986521
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
.+.. .++ ..+|| |||+|.+....+..
T Consensus 42 ------~~~~-----------------------------------~~~------------~~~~d-iih~~~~~~~~~~~ 67 (365)
T cd03825 42 ------ALIS-----------------------------------KIE------------IINAD-IVHLHWIHGGFLSI 67 (365)
T ss_pred ------hhhh-----------------------------------Chh------------cccCC-EEEEEccccCccCH
Confidence 0000 001 12599 99999866655443
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccc---cccccCCCC-CcCCcchhhhhHHh-hcCCE
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSS---FDFIDGYNK-PVRGRKINWMKAGI-LESDM 319 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~-~~ad~ 319 (586)
....... .++|+|+++|+..+...-... . .....+... ..+...+.. ......+.+....+ ..++.
T Consensus 68 ~~~~~~~-----~~~~~v~~~hd~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 68 EDLSKLL-----DRKPVVWTLHDMWPFTGGCHY--P--GGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHH-----cCCCEEEEcccCcccccccCC--c--cccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 3332220 388999999986532110000 0 000000000 000000000 00001112222222 45778
Q ss_pred EEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCC
Q 007873 320 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (586)
Q Consensus 320 vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 399 (586)
++++|+..++.+.+. +.++ ..++.++|||+|...|.|.. +...++.++++.+
T Consensus 139 ~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~~ 190 (365)
T cd03825 139 IVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPAD 190 (365)
T ss_pred EEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCCC
Confidence 999999998888752 2232 34899999999998887653 4456777787643
Q ss_pred CCCcEEEEEecCcc--ccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccC-hHHHHHH
Q 007873 400 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 473 (586)
Q Consensus 400 ~~~~~i~~iGrl~~--~KG~d~Ll~A~~~l~~---~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~~ 473 (586)
.+++++.|+... .||++.+++|+..+.+ ++++++++|.++..... ....++.+.+..+ .+++..+
T Consensus 191 --~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 191 --KKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred --CeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 367777777765 8999999999999975 78999999998742211 2344677777777 7778899
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 474 l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
++.||++++||..|++|++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~- 330 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD- 330 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999999999997 889999999999999998
Q ss_pred CHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 554 GTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 554 ~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++.+.++++++. .++|||+.++++|++.+.
T Consensus 331 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 331 -PDEREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 777888888774 578999999999998764
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=290.60 Aligned_cols=353 Identities=18% Similarity=0.230 Sum_probs=251.4
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||+++.+.+ ..||.+.++.+|+++|.++||+|++++........... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588887653 36999999999999999999999999875321111000 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.+... . ....+......+.++++. ++|| |||+|..++.++..+
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~------------~~pd-iv~~~~~~~~~~~~l 96 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQ------------FKPD-VVHAHMFHANIFARL 96 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHh------------cCCC-EEEEcccchHHHHHH
Confidence 11100 0 000011111223333333 3699 999998877766666
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
++... .+.|++++.|+....+.. .....+.....++.++++|+
T Consensus 97 ~~~~~------~~~~~v~~~h~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 97 LRLFL------PSPPLICTAHSKNEGGRL-------------------------------RMLAYRLTDFLSDLTTNVSK 139 (360)
T ss_pred HHhhC------CCCcEEEEeeccCchhHH-------------------------------HHHHHHHHhhccCceEEEcH
Confidence 65542 578999999975431100 01112333446888999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
...+.+... .+++. .++.+||||+|...|.+... .+..++++++++. +.+++
T Consensus 140 ~~~~~~~~~--~~~~~------~~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~~ 191 (360)
T cd04951 140 EALDYFIAS--KAFNA------NKSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFVI 191 (360)
T ss_pred HHHHHHHhc--cCCCc------ccEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEEE
Confidence 999988852 22333 38999999999887765432 2455777888764 45899
Q ss_pred EEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.+++...+++ .++.+.+. .+++..+|+.||+++
T Consensus 192 l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~v 267 (360)
T cd04951 192 LAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGL--RDDIAAYYNAADLFV 267 (360)
T ss_pred EEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhhceEE
Confidence 999999999999999999999865 589999999998 4455666555543 35666654 345678999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
+||..|++|++++|||++|+|||+++.|++.|++.+ +|+.+ +++|+++++++|.+++++. +.....+
T Consensus 268 ~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~~ 334 (360)
T cd04951 268 LSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDII 334 (360)
T ss_pred ecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 999999999999999999999999999999999987 78887 8999999999999999652 3444444
Q ss_pred HHH--HHHhcCCHHHHHHHHHHHhc
Q 007873 562 MKN--GMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 562 ~~~--~~~~~fsw~~~a~~~~~~~~ 584 (586)
..+ ...+.|||+.++++|++.++
T Consensus 335 ~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 335 GARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 443 35789999999999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=299.99 Aligned_cols=341 Identities=15% Similarity=0.194 Sum_probs=232.0
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhC--CCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCc
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (586)
|||++++..+++ .||+++++.+++++|.++ ||+|.++++....... +. ....+. .. +
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~-------------~~~~~~-~~---~ 59 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WL-------------KEIKYA-QS---F 59 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HH-------------Hhcchh-cc---c
Confidence 899999876433 599999999999999999 8999999976321111 00 000000 00 0
Q ss_pred eEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchH
Q 007873 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (586)
Q Consensus 163 ~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~ 242 (586)
+...+. ++. .. .....+.+.++. .+|| +||+|+.....+
T Consensus 60 ~~~~~~---~~~---------------------~~----~~~~~l~~~l~~------------~~~D-ii~~~~~~~~~~ 98 (359)
T PRK09922 60 SNIKLS---FLR---------------------RA----KHVYNFSKWLKE------------TQPD-IVICIDVISCLY 98 (359)
T ss_pred ccchhh---hhc---------------------cc----HHHHHHHHHHHh------------cCCC-EEEEcCHHHHHH
Confidence 000000 000 00 011122233333 2699 999997655444
Q ss_pred HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 243 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
...+++... ...+++.+.|...... . .. ....+..+|.+++
T Consensus 99 ~~~~~~~~~-----~~~~~~~~~h~~~~~~---------------~------------------~~-~~~~~~~~d~~i~ 139 (359)
T PRK09922 99 ANKARKKSG-----KQFKIFSWPHFSLDHK---------------K------------------HA-ECKKITCADYHLA 139 (359)
T ss_pred HHHHHHHhC-----CCCeEEEEecCccccc---------------c------------------hh-hhhhhhcCCEEEE
Confidence 444444321 2345666667421100 0 00 0111368999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcC-CCCccccccccCccccccccHHHHHHHHHHhCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 401 (586)
+|+..++.+.. +|++.+ ++.+||||+|.+.+. |.. ...+
T Consensus 140 ~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------------~~~~ 179 (359)
T PRK09922 140 ISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------------ERDK 179 (359)
T ss_pred cCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc-------------------------------ccCC
Confidence 99999999885 566644 899999999965543 221 1123
Q ss_pred CcEEEEEecCc--cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccCh--HHHHHHHH
Q 007873 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI--PLAHMIIA 475 (586)
Q Consensus 402 ~~~i~~iGrl~--~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~--~~~~~~l~ 475 (586)
.++|+|+||+. ++||++.+++|+.++. ++++|+|+|+|+ ..+.++++..+++ +++.+.+..+. +.+..+|+
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~ 256 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIK 256 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHh
Confidence 57899999996 5699999999999885 489999999998 4566777776654 46777766543 67778999
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcC
Q 007873 476 GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (586)
Q Consensus 476 ~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 554 (586)
.||++++||.+|+||++++||||||+|||+++ .||..|++.++.+|+++ +++|+++++++|.+++++..
T Consensus 257 ~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 257 NVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred cCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999 89999999999999998 99999999999999999832
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 007873 555 TQALAEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
......+..+ .++|+-+...+++.+
T Consensus 327 ~~~~~~~~~~--~~~~~~~~~~~~~~~ 351 (359)
T PRK09922 327 KYQHDAIPNS--IERFYEVLYFKNLNN 351 (359)
T ss_pred cCCHHHHHHH--HHHhhHHHHHHHHHH
Confidence 1122333332 355666666666554
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=290.37 Aligned_cols=355 Identities=19% Similarity=0.206 Sum_probs=257.5
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCc-cccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY-KDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
||+++...+.+ ||.+.++..|+++|.+.||+|.+++...... .+.. ...|+++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~----------------------~~~~i~v 54 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEEL----------------------EEAGVPV 54 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHH----------------------HhcCCeE
Confidence 68999987644 9999999999999999999999998753211 1100 0124555
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.+..+.... .. .....+.+.++.. +|| +||+|.+.......
T Consensus 55 ~~~~~~~~~~---------------------~~----~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~ 96 (365)
T cd03807 55 YCLGKRPGRP---------------------DP----GALLRLYKLIRRL------------RPD-VVHTWMYHADLYGG 96 (365)
T ss_pred EEEecccccc---------------------cH----HHHHHHHHHHHhh------------CCC-EEEeccccccHHHH
Confidence 5443221100 00 1112223333322 599 88998877666655
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
...... .+.|++++.|+...... .+. ........+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~-------------~~~-------------~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 97 LAARLA------GVPPVIWGIRHSDLDLG-------------KKS-------------TRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHHhc------CCCcEEEEecCCccccc-------------chh-------------HhHHHHHHHHhccccCeEEecc
Confidence 555432 47899999997654211 000 0011122344556789999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+...+.+.+ ++++.+ ++.+++||+|...+.+.... +..++++++++. +.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeE
Confidence 999999886 355543 89999999998887665421 445567788764 4589
Q ss_pred EEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH-HC--CCceEEEeccChHHHHHHHHhccE
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LY--PEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~-~~--~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
|+|+|++.+.||++.+++|+..+.+ ++++|+|+|.+.. ...+++... .. ..++.+.+. .+++..+++.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999866 6899999999873 223333333 32 234554442 3456789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||..|++|++++|||+||+|||+++.||..|++.+ +|+++ +++|+++++++|.+++++ ++.+.
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 337 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQ 337 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 99999999999999999999999999999999999988 89987 899999999999999998 77888
Q ss_pred HHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 560 EMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 560 ~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++++++. .++|||+.++++|.+.+
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 338 ALGEAARERIEENFSIEAMVEAYEELY 364 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 8888874 57899999999999865
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=289.78 Aligned_cols=349 Identities=21% Similarity=0.264 Sum_probs=247.6
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+.+|+|. .||.+.++.+|+++|.++||+|++++.......... ...+.+++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999999886 899999999999999999999999997632211100 01122222
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.++. +... .... +.. ......+ +. ..+|| +||+|..........
T Consensus 57 ~~~~--~~~~-----~~~~--------~~~----------~~~~~~~-~~---------~~~~D-ii~~~~~~~~~~~~~ 100 (357)
T cd03795 57 RAPS--LLNV-----ASTP--------FSP----------SFFKQLK-KL---------AKKAD-VIHLHFPNPLADLAL 100 (357)
T ss_pred Eeec--cccc-----cccc--------ccH----------HHHHHHH-hc---------CCCCC-EEEEecCcchHHHHH
Confidence 2211 1000 0000 000 0000111 11 12699 888886433222111
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
.... .+.|+++++|+....... .......+.+..++.+|.++++|+
T Consensus 101 ~~~~-------~~~~~i~~~h~~~~~~~~---------------------------~~~~~~~~~~~~~~~~d~vi~~s~ 146 (357)
T cd03795 101 LLLP-------RKKPVVVHWHSDIVKQKL---------------------------LLKLYRPLQRRFLRRADAIVATSP 146 (357)
T ss_pred HHhc-------cCceEEEEEcChhhccch---------------------------hhhhhhHHHHHHHHhcCEEEeCcH
Confidence 1111 378999999963321100 000112344667899999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
.+.+.+... .+.+ .++.+||||+|...+.+.... .. .....+ .+.+.|
T Consensus 147 ~~~~~~~~~--~~~~-------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~i 194 (357)
T cd03795 147 NYAETSPVL--RRFR-------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPFF 194 (357)
T ss_pred HHHHHHHHh--cCCc-------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcEE
Confidence 999877642 1111 279999999999888664311 00 112222 345899
Q ss_pred EEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEEEEc
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIP 483 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~l~P 483 (586)
+|+||+.+.||++.+++|+.++. +++|+|+|+|+ ....++++..+.+ .++.+.+..+.+++..+++.||++++|
T Consensus 195 ~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 195 LFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred EEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeC
Confidence 99999999999999999999996 89999999997 4556666664433 478888888888889999999999999
Q ss_pred CC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc-CcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHH
Q 007873 484 SR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560 (586)
Q Consensus 484 S~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 560 (586)
|. .|++|++++|||++|+|||+++.++..+.+.+ +.+|+++ +++|+++++++|.+++++ ++.+++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~~ 338 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRER 338 (357)
T ss_pred CcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHHH
Confidence 96 49999999999999999999999999999986 8999998 999999999999999998 888889
Q ss_pred HHHHHH---HhcCCHHHHH
Q 007873 561 MMKNGM---AQDLSWKVSI 576 (586)
Q Consensus 561 ~~~~~~---~~~fsw~~~a 576 (586)
|++++. .++|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 998884 5899999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=291.91 Aligned_cols=366 Identities=21% Similarity=0.241 Sum_probs=251.3
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|+..++|. .||.+.++.+|+++|+++||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999988764 899999999999999999999999998643222110000 00000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecC-CccchHH-
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIP- 243 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~-~~~~~~~- 243 (586)
.......... ....+ .+............ .++| +||+|+ |......
T Consensus 57 ~~~~~~~~~~--------------------~~~~~-~~~~~~~~~~~~~~----------~~~d-ii~~~~~~~~~~~~~ 104 (375)
T cd03821 57 LFSINVAYGL--------------------NLARY-LFPPSLLAWLRLNI----------READ-IVHVHGLWSYPSLAA 104 (375)
T ss_pred ecccchhhhh--------------------hhhhh-ccChhHHHHHHHhC----------CCCC-EEEEecccchHHHHH
Confidence 0000000000 00000 00001111111111 2599 888887 3332222
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..+.+. .++|++++.|+.......... .+.. . .......+..+..++.+++.
T Consensus 105 ~~~~~~-------~~~~~i~~~~~~~~~~~~~~~---------~~~~----------~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 105 ARAARK-------YGIPYVVSPHGMLDPWALPHK---------ALKK----------R--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHH-------hCCCEEEEccccccccccccc---------hhhh----------H--HHHHHHHHHHHhcCCEEEEC
Confidence 222222 488999999975431110000 0000 0 00112235567789999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+.....+... .. ..++.+||||+|...|.+... ...++..+.+ ++.+
T Consensus 157 s~~~~~~~~~~----~~------~~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~ 204 (375)
T cd03821 157 SEQEAAEIRRL----GL------KAPIAVIPNGVDIPPFAALPS--------------------RGRRRKFPIL--PDKR 204 (375)
T ss_pred CHHHHHHHHhh----CC------cccEEEcCCCcChhccCcchh--------------------hhhhhhccCC--CCCc
Confidence 98777776631 11 238999999999988876531 1114445544 3558
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
+|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.+...+...++.+..+++ .++.+.+..+.+++..+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999977 799999999987656666666544433 46888877788888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||..|+||++++|||+||+|||+++.+|+.|++.+ .+|+++ ++++++++++|.+++++ ++.++
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 889874 55679999999999998 77888
Q ss_pred HHHHHHH---HhcCCHHHHHHHHHH
Q 007873 560 EMMKNGM---AQDLSWKVSIGTVQE 581 (586)
Q Consensus 560 ~~~~~~~---~~~fsw~~~a~~~~~ 581 (586)
++++++. .++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 8888773 689999999999864
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=288.33 Aligned_cols=356 Identities=18% Similarity=0.196 Sum_probs=247.2
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||+|++..++|. ..||.+.++.+|+++|+++||+|.++++............ +....
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 57 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI----------------------GVVVY 57 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc----------------------cceee
Confidence 799999998774 5799999999999999999999999998643222110000 00000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.......... ......+ .........+...+.+.++.. +|| +||+|.+........
T Consensus 58 ~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 113 (359)
T cd03823 58 GRPIDEVLRS---ALPRDLF--------HLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSIL 113 (359)
T ss_pred ccccccccCC---Cchhhhh--------HHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHHH
Confidence 0000000000 0000000 000000011222333333332 599 889987643322222
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
..... .++|+++++|+....... ..+ .....|.++++|+
T Consensus 114 ~~~~~------~~~~~i~~~hd~~~~~~~--------------------------------~~~---~~~~~d~ii~~s~ 152 (359)
T cd03823 114 RAARD------RGIPIVLTLHDYWLICPR--------------------------------QGL---FKKGGDAVIAPSR 152 (359)
T ss_pred HHHHh------cCCCEEEEEeeeeeecch--------------------------------hhh---hccCCCEEEEeCH
Confidence 11111 478999999975431100 000 0112399999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+ ++.. ..++.+|+||+|...+.+... +. ..+.++|
T Consensus 153 ~~~~~~~~---~~~~------~~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~i 194 (359)
T cd03823 153 FLLDRYVA---NGLF------AEKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLRF 194 (359)
T ss_pred HHHHHHHH---cCCC------ccceEEecCCcChhhcccccc---------------------------CC--CCCceEE
Confidence 99999886 3332 238999999999988765431 11 1345789
Q ss_pred EEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 485 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~ 485 (586)
+|+|++.+.||++.+++++..+.+++++|+++|.+.......... ....++...+..+.+++..+++.||++++||.
T Consensus 195 ~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 195 GFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred EEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 999999999999999999999976799999999987433222211 34456888888888899999999999999998
Q ss_pred -CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 007873 486 -FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 564 (586)
Q Consensus 486 -~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~ 564 (586)
.|++|++++|||+||+|||+++.+|..|++.++.+|+++ +++|+++++++|.+++++ ++.+++++++
T Consensus 272 ~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~~ 339 (359)
T cd03823 272 WPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRAG 339 (359)
T ss_pred ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHHh
Confidence 699999999999999999999999999999999999998 999999999999999998 8888999988
Q ss_pred HHHhcCCHHHHHHHHHHHh
Q 007873 565 GMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 565 ~~~~~fsw~~~a~~~~~~~ 583 (586)
+.+ .++.+.++++|++.+
T Consensus 340 ~~~-~~~~~~~~~~~~~~~ 357 (359)
T cd03823 340 IEP-PRSIEDQAEEYLKLY 357 (359)
T ss_pred HHH-hhhHHHHHHHHHHHh
Confidence 764 344599999988765
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=292.61 Aligned_cols=349 Identities=15% Similarity=0.120 Sum_probs=243.9
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCC--ccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ--YKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
||++++..+ + .||.+.++.+++++|++.||+|+++++.... +... ....|+.
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~----------------------~~~~~~~ 54 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDE----------------------IEKLGGK 54 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHH----------------------HHHcCCe
Confidence 789999875 3 7999999999999999999999999986322 0000 0012343
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
++.+..+ .. +... +...+.+.++. ++|| +||+|......++
T Consensus 55 ~~~~~~~--~~---------------------~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~ 95 (358)
T cd03812 55 IYYIPAR--KK---------------------NPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFI 95 (358)
T ss_pred EEEecCC--Cc---------------------cHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHH
Confidence 3332111 00 0111 11222222222 2699 9999987655555
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..+.... ....++++.|+......+... ......+.+..+..+|.++++
T Consensus 96 ~~~~~~~------~~~~~v~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~i~~ 144 (358)
T cd03812 96 LLAAKKA------GVKVRIAHSHNTSDSHDKKKK-------------------------ILKYKVLRKLINRLATDYLAC 144 (358)
T ss_pred HHHHhhC------CCCeEEEEeccccccccccch-------------------------hhHHHHHHHHHHhcCCEEEEc
Confidence 5544432 233456778865432211000 000012234567789999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+..++.+... .+ ..++.+||||+|...+.+.... ++. +++.+.. .+.+
T Consensus 145 s~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~ 193 (358)
T cd03812 145 SEEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKF 193 (358)
T ss_pred CHHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCE
Confidence 99999888751 22 3489999999999887664321 111 4445544 3558
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
+|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.+++...+++ +++.+.+. .+++..+++.||+
T Consensus 194 ~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 269 (358)
T cd03812 194 VIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDV 269 (358)
T ss_pred EEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCE
Confidence 99999999999999999999999976 699999999998 4555666655543 45766665 4556789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||+.|++|++++|||++|+|||+|+.||..|++.+ ..|++. .++++++++++|.+++++ ++..+
T Consensus 270 ~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~ 336 (358)
T cd03812 270 FLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLS----------LDESPEIWAEEILKLKSE--DRRER 336 (358)
T ss_pred EEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEe----------CCCCHHHHHHHHHHHHhC--cchhh
Confidence 99999999999999999999999999999999999999 456654 777899999999999999 77778
Q ss_pred HHHHHHHHhcCCHHHHHHH
Q 007873 560 EMMKNGMAQDLSWKVSIGT 578 (586)
Q Consensus 560 ~~~~~~~~~~fsw~~~a~~ 578 (586)
.+..++..+..+++.....
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (358)
T cd03812 337 SSESIKKKGLDADDEANTL 355 (358)
T ss_pred hhhhhhhccchhhhhhhHh
Confidence 8888877666666655544
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=288.77 Aligned_cols=341 Identities=21% Similarity=0.215 Sum_probs=250.4
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||+|++..|+| |.+.++.+++++|.++||+|.+++........... ... ..+..+
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------~~~--~~~~~~- 55 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHP-----------------EDR--AELART- 55 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccc-----------------ccc--ccccch-
Confidence 79999998744 36789999999999999999999986432111000 000 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
. +. .+..........+.+.+.. .++| +||+|..........
T Consensus 56 -----~---------------------~~---~~~~~~~~~~~~~~~~~~~---------~~~D-ii~~~~~~~~~~~~~ 96 (355)
T cd03799 56 -----R---------------------YL---ARSLALLAQALVLARELRR---------LGID-HIHAHFGTTPATVAM 96 (355)
T ss_pred -----H---------------------HH---HHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCCchHHHHH
Confidence 0 00 0111111112222222211 2599 999998655444444
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
+.... .++|+++++|+...... ....+++..++.+|.++++|+
T Consensus 97 ~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 97 LASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAISE 139 (355)
T ss_pred HHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECCH
Confidence 44332 37899999996432100 001355777889999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+. ++.+. .++.+||||+|...+.+.... ...+.+.|
T Consensus 140 ~~~~~l~~~--~~~~~------~~~~vi~~~~d~~~~~~~~~~-----------------------------~~~~~~~i 182 (355)
T cd03799 140 YNRQQLIRL--LGCDP------DKIHVVHCGVDLERFPPRPPP-----------------------------PPGEPLRI 182 (355)
T ss_pred HHHHHHHHh--cCCCc------ccEEEEeCCcCHHHcCCcccc-----------------------------ccCCCeEE
Confidence 999999862 24443 389999999998877654200 11245789
Q ss_pred EEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+|+|++.+.||++.+++++.++.+ ++++|+|+|.|+ ..+.+++...++ +.++.+.+..+.+++..+++.||+++
T Consensus 183 ~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l 260 (355)
T cd03799 183 LSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFV 260 (355)
T ss_pred EEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEE
Confidence 999999999999999999999876 589999999987 345556655554 35788888888888999999999999
Q ss_pred EcCCC------CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCH
Q 007873 482 IPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 555 (586)
Q Consensus 482 ~PS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~ 555 (586)
+||.. |++|++++|||++|+|+|+++.|+..|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 261 ~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~ 328 (355)
T cd03799 261 LPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD--P 328 (355)
T ss_pred ecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999 99999999999999999999999999999999999998 889999999999999998 7
Q ss_pred HHHHHHHHHHH---HhcCCHHHHHHH
Q 007873 556 QALAEMMKNGM---AQDLSWKVSIGT 578 (586)
Q Consensus 556 ~~~~~~~~~~~---~~~fsw~~~a~~ 578 (586)
+.+.++++++. .++|||+..+++
T Consensus 329 ~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 329 ELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 77888998884 588999999875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=280.48 Aligned_cols=366 Identities=26% Similarity=0.365 Sum_probs=264.1
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++..++|. .||.+.++..|+++|.+.||+|.++++.......... . ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~----------------~------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEE----------------V------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceee----------------e------cCccee
Confidence 799999988775 7999999999999999999999999987432221100 0 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.. ... . ..+ ...............++. .++| +||+|.+........
T Consensus 57 ~~--~~~-~--------~~~----------~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~~ 102 (374)
T cd03801 57 RP--PPL-L--------RVR----------RLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAAL 102 (374)
T ss_pred cC--Ccc-c--------ccc----------hhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHHH
Confidence 00 000 0 000 000111111222222222 2599 899988776665543
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
.... .++|+++++|+..+...... .. ........+.+..++.+|.++++|+
T Consensus 103 ~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s~ 153 (374)
T cd03801 103 AARL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVSE 153 (374)
T ss_pred HHHh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEecH
Confidence 3332 58999999998765221110 00 0001123445667889999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+. ++.+. .++.++|||+|...+.+.. ...+.....+ .+.++|
T Consensus 154 ~~~~~~~~~--~~~~~------~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~i 202 (374)
T cd03801 154 ATREELREL--GGVPP------EKITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPVI 202 (374)
T ss_pred HHHHHHHhc--CCCCC------CcEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeEE
Confidence 999999862 33322 3899999999988776531 1112222222 345899
Q ss_pred EEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHH--CCCceEEEeccChHHHHHHHHhccEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+|+|++.+.||++.+++++..+.+ ++++|+|+|.+. ....++++..+ .+.++...+..+.+++..+++.||+++
T Consensus 203 ~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 280 (374)
T cd03801 203 LFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFV 280 (374)
T ss_pred EEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEE
Confidence 999999999999999999999876 589999999776 45555555433 335788888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
+|+..|++|++++|||++|+|||+++.+++.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~~ 348 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRRL 348 (374)
T ss_pred ecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHHH
Confidence 9999999999999999999999999999999999999999998 999999999999999998 7888888
Q ss_pred HHHHH---HhcCCHHHHHHHHHHHh
Q 007873 562 MKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 562 ~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++++. .+.|||+.+++++.+..
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 88875 68999999999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=304.66 Aligned_cols=285 Identities=18% Similarity=0.218 Sum_probs=219.3
Q ss_pred CCCEEEEecCCc-cchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCc
Q 007873 227 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 227 ~pDvii~~h~~~-~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
++| |+|+|... .+++++.++.. .++|+|++.|++....+.. ++.... | .....+..+.+
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~----~------~~~~~~~~~~~ 232 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQAD----W------EMSYFRRLWIR 232 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcc----c------chHHHHHHHHH
Confidence 589 99999743 34445555544 4899999999865422110 000000 0 00000011111
Q ss_pred c-hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccH
Q 007873 306 K-INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (586)
Q Consensus 306 ~-~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (586)
. ..+.+..++.||.|+++|+..++.+.. +|++.+ ++.+||||+|.+.|.+....
T Consensus 233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~---------------- 287 (475)
T cd03813 233 FFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA---------------- 287 (475)
T ss_pred HHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc----------------
Confidence 1 223466788999999999999887764 676655 89999999999988765310
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCC--hhhHHHHHHHHHHCC--Cc
Q 007873 385 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EK 458 (586)
Q Consensus 385 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~--~~~~~~l~~l~~~~~--~~ 458 (586)
. ..++.++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++++..+++ ++
T Consensus 288 ----------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~ 355 (475)
T cd03813 288 ----------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDN 355 (475)
T ss_pred ----------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCe
Confidence 0 12355899999999999999999999999876 799999999984 456778888887765 46
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc------CcceEEEcccccccc
Q 007873 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCE 532 (586)
Q Consensus 459 v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~~~~~~~~~~~ 532 (586)
+.+.+ .+++..+++.||++++||..|++|++++|||+||+|||+|+.||+.|++.+ |.+|+++
T Consensus 356 V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv-------- 424 (475)
T cd03813 356 VKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV-------- 424 (475)
T ss_pred EEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE--------
Confidence 77666 445678999999999999999999999999999999999999999999998 6799998
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 533 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 533 ~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++.|+++++++|.+++++ ++.+++|++++. .+.|+|+.++++|.+.+
T Consensus 425 --~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY 474 (475)
T cd03813 425 --PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLY 474 (475)
T ss_pred --CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999998 888899998884 58899999999999865
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=290.30 Aligned_cols=360 Identities=19% Similarity=0.188 Sum_probs=255.0
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++..+.|. ..||+++++.+|+++|+++||+|+++++............ . ....
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~--------------~-------~~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR--------------A-------ALRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch--------------h-------cccc-
Confidence 689999888772 4899999999999999999999999998743222210000 0 0000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
...... ......+............. .++| ++|+|.+.....
T Consensus 58 -~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~--- 99 (365)
T cd03809 58 -LLRLPR---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL--- 99 (365)
T ss_pred -cccccc---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc---
Confidence 000000 00001111111111122221 1599 899987665544
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
+ ..++|+++++|+..+.... ..... ........+++..++.+|.++++|+
T Consensus 100 --~-------~~~~~~i~~~hd~~~~~~~-----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s~ 149 (365)
T cd03809 100 --R-------LRGVPVVVTIHDLIPLRFP-----------EYFSP----------GFRRYFRRLLRRALRRADAIITVSE 149 (365)
T ss_pred --c-------CCCCCEEEEeccchhhhCc-----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEccH
Confidence 1 1589999999986541110 00000 0001123455777889999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+. ++.+. .++.++|||+|...+.+..++ . +...... .+.++|
T Consensus 150 ~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~--------------------~-~~~~~~~--~~~~~i 198 (365)
T cd03809 150 ATKRDLLRY--LGVPP------DKIVVIPLGVDPRFRPPPAEA--------------------E-VLRALYL--LPRPYF 198 (365)
T ss_pred HHHHHHHHH--hCcCH------HHEEeeccccCccccCCCchH--------------------H-HHHHhcC--CCCCeE
Confidence 999999862 44333 389999999998887665321 1 2222222 345899
Q ss_pred EEEecCccccCHHHHHHHHhhcccC--CeEEEEEeCCChhhHHHHHHHH-HHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~~--~v~lvIvG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
+|+|++.+.||++.+++++..+.+. +++|+++|.+........+.+. .....++...+..+.+++..+++.||++++
T Consensus 199 ~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 199 LYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred EEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999999999999999999999773 6999999987643443333321 223457888888888899999999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 562 (586)
||.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|+++++++|.+++++ ++.+.+++
T Consensus 279 ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 344 (365)
T cd03809 279 PSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREELR 344 (365)
T ss_pred cchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 99999999999999999999999999999999964 67776 899999999999999988 88888888
Q ss_pred HHH--HHhcCCHHHHHHHHHH
Q 007873 563 KNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 563 ~~~--~~~~fsw~~~a~~~~~ 581 (586)
+++ ..++|||+.++++|.+
T Consensus 345 ~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 345 ERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHhCCHHHHHHHHhC
Confidence 887 4688999999999864
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=304.29 Aligned_cols=281 Identities=14% Similarity=0.137 Sum_probs=202.2
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEE-EEcCCccccccCcccccccCCChhhccccccccCCCCCcCCc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~-~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
+|| |||+|.....++..+..+. .++|+|+ +.|+... . .. +..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~-~~---------~~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-V-DR---------PDRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-c-cc---------hhHH---------------HH
Confidence 599 9999988777666665554 3778876 5564321 0 00 0000 00
Q ss_pred chhhhhHHhh--cCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCcccccccc
Q 007873 306 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (586)
Q Consensus 306 ~~~~~~~~~~--~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (586)
........+. .++.++++|+..++.+.. .+|++.+ ++.+||||+|+..|.|....
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~--------------- 502 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC--------------- 502 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCchh---------------
Confidence 0111111222 345677778888777764 2566644 89999999998888653210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--Cce
Q 007873 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 459 (586)
Q Consensus 384 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v 459 (586)
+. .+..+.....++.++|+++||+.++||++.|++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++
T Consensus 503 ---~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 503 ---TA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 11 1111111112345799999999999999999999998865 789999999998 5677888877765 456
Q ss_pred EEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCC-
Q 007873 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 538 (586)
Q Consensus 460 ~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d- 538 (586)
.+.+.. +.+..+|+.||++++||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|+++ +++|
T Consensus 577 ~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 665543 356789999999999999999999999999999999999999999999999999998 7776
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHhc
Q 007873 539 -VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 539 -~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~~ 584 (586)
+++++++|.+++.+ .....++++++ ..++|||+.++++|++.+.
T Consensus 645 ~~~~La~aL~~ll~~--l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDM--CAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhC--hhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 46899999888876 33334455555 3579999999999998764
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=281.84 Aligned_cols=362 Identities=22% Similarity=0.302 Sum_probs=252.1
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++..|+|. .||.+..+.+++++|+++||+|.++++........... .++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 799999998886 89999999999999999999999999875432221000 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCc-cchHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPC 244 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~-~~~~~~ 244 (586)
..... +..+ . ...+ .+.......++. ++|| +||+|... ......
T Consensus 57 ~~~~~-~~~~--------~------------~~~~-~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~~ 101 (374)
T cd03817 57 RVPTF-KYPD--------F------------RLPL-PIPRALIIILKE------------LGPD-IVHTHTPFSLGLLGL 101 (374)
T ss_pred ccccc-hhhh--------h------------hccc-cHHHHHHHHHhh------------cCCC-EEEECCchhhhhHHH
Confidence 00000 0000 0 0000 011122222222 2599 88887643 233333
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcch-hhhhHHhhcCCEEEEe
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 323 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vitv 323 (586)
.+.+. .++|+++++|+.... +. ......... ...... .+.+..+..+|.++++
T Consensus 102 ~~~~~-------~~~~~i~~~~~~~~~--~~----~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 102 RVARK-------LGIPVVATYHTMYED--YT----HYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HHHHH-------cCCCEEEEecCCHHH--HH----HHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEec
Confidence 33333 489999999975430 00 000000000 000111 4557778899999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
|+..++.+.. ++.+ .++.++|||+|...+.+... ...++.++++. +.+
T Consensus 156 s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~ 203 (374)
T cd03817 156 SEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIPE--DEP 203 (374)
T ss_pred cHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCCC--CCe
Confidence 9999888875 3332 26899999999988876531 22245555543 458
Q ss_pred EEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
+|+++|++.+.||++.+++++..+.+ ++++|+++|.|+ ..+.++++..+++ .++.+.+..+.+++..+++.||+
T Consensus 204 ~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (374)
T cd03817 204 VLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAADL 281 (374)
T ss_pred EEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCE
Confidence 99999999999999999999999876 789999999987 4556666655443 47888888888889999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.++
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~~ 348 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELRR 348 (374)
T ss_pred EEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHHH
Confidence 999999999999999999999999999999999999999999998 77777 999999999998 77788
Q ss_pred HHHHHHH--HhcCCHHHHHHHH
Q 007873 560 EMMKNGM--AQDLSWKVSIGTV 579 (586)
Q Consensus 560 ~~~~~~~--~~~fsw~~~a~~~ 579 (586)
+|++++. .+++++.....++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~ 370 (374)
T cd03817 349 RLSKNAEESAEKFSFAKKVEKL 370 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8998885 3455544443333
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=287.74 Aligned_cols=373 Identities=14% Similarity=0.084 Sum_probs=245.2
Q ss_pred CceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
..+|++++.. .+|....+..++++|+++||+|+|++.......+. ....+|+.
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~ 55 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNIT 55 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEE
Confidence 4577777763 46667788999999999999999999763211100 01123566
Q ss_pred EEEEcCcc-ccccccCCCCCcccCCCCCCCCcchhHHH-HHHHHHHHHHhHhh-cccCCCCCCCCCCCCEEEEecCCcc-
Q 007873 164 RVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRIL-NLNSNKYFSGPYGEDVVFVANDWHT- 239 (586)
Q Consensus 164 ~~~v~~~~-~~~~~w~~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l-~~~~~~~~~~~~~pDvii~~h~~~~- 239 (586)
++.+..+. ... ......++ +......+.+++.+ .. .+|| +||+|....
T Consensus 56 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~D-vi~~~~~~~~ 107 (415)
T cd03816 56 IHPLPPPPQRLN------------------KLPFLLFAPLKVLWQFFSLLWLLYKL---------RPAD-YILIQNPPSI 107 (415)
T ss_pred EEECCCCccccc------------------cchHHHHHHHHHHHHHHHHHHHHHhc---------CCCC-EEEEeCCCCc
Confidence 66554321 000 00011111 11111222222211 11 1599 788876332
Q ss_pred --chHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhh-hhHHhhc
Q 007873 240 --SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILE 316 (586)
Q Consensus 240 --~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 316 (586)
+.++.++++. .++|+|+++|+..+. .. ..+.. ..+...+...| .+..++.
T Consensus 108 ~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~-------------~~~~~~~~~~~~e~~~~~~ 160 (415)
T cd03816 108 PTLLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLG-------------ENHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred hHHHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccC-------------CCCHHHHHHHHHHHHHhhc
Confidence 2233333443 478999999975421 00 00000 00000012233 3556778
Q ss_pred CCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH----
Q 007873 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA---- 392 (586)
Q Consensus 317 ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 392 (586)
+|.|+++|+.+++.+.+ +|++.+ ++.+||||. ...|.|.... .....+.+
T Consensus 161 ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~ 214 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKT 214 (415)
T ss_pred CCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccc
Confidence 99999999999999875 555544 999999994 5667665321 00111111
Q ss_pred ---------HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--------CCeEEEEEeCCChhhHHHHHHHHHHC
Q 007873 393 ---------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILY 455 (586)
Q Consensus 393 ---------~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--------~~v~lvIvG~g~~~~~~~l~~l~~~~ 455 (586)
..++.. ++.++++++||+.++||++.|++|+..+.+ ++++|+|+|+|+ .++.++++.+++
T Consensus 215 ~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~ 291 (415)
T cd03816 215 FLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKEL 291 (415)
T ss_pred ccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHc
Confidence 112222 234678899999999999999999999853 479999999998 567777777766
Q ss_pred C-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEcccccc
Q 007873 456 P-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 530 (586)
Q Consensus 456 ~-~~v~~~~~-~~~~~~~~~l~~aDi~l~PS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~ 530 (586)
+ .++.+... .+.++++.+|+.||++++|+. .|++|++++|||+||+|||+++.||..|+++++.+|+++
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv------ 365 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF------ 365 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE------
Confidence 5 25665544 477888999999999997543 478999999999999999999999999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 007873 531 CEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMA-QDLSWKVSIGTV 579 (586)
Q Consensus 531 ~~~v~~~d~~~la~~I~~ll~~~-~~~~~~~~~~~~~~-~~fsw~~~a~~~ 579 (586)
+|+++++++|.+++++. .++.+++|++++.+ ..++|+...++.
T Consensus 366 ------~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~ 410 (415)
T cd03816 366 ------GDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWDRV 410 (415)
T ss_pred ------CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHHHH
Confidence 38999999999999872 25778999999863 578888766554
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=279.41 Aligned_cols=348 Identities=22% Similarity=0.259 Sum_probs=242.1
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||+||+.. +|. .||.++++.+|+++|+++||+|.+++..... .. +... . .. .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~-~~~~--------~--~~--------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALY-PS-LLYG--------G--EQ--------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeeccc-Cc-ccCC--------C--cc--------cceeee
Confidence 79999875 564 7999999999999999999999999876321 11 0000 0 00 000000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH--
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP-- 243 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~-- 243 (586)
. .+ +. .....+.+.++.. +|| +||+|.|.....+
T Consensus 58 -~----------------~~----------~~----~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 93 (366)
T cd03822 58 -V----------------LD----------NP----LDYRRAARAIRLS------------GPD-VVVIQHEYGIFGGEA 93 (366)
T ss_pred -e----------------cC----------Cc----hhHHHHHHHHhhc------------CCC-EEEEeeccccccchh
Confidence 0 00 00 0111122223322 599 8888775543222
Q ss_pred -HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 244 -CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 244 -~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
..+....+ ..++|+|+++|+...... ......+++..++.+|.+++
T Consensus 94 ~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii~ 140 (366)
T cd03822 94 GLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVIV 140 (366)
T ss_pred hHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEEE
Confidence 22222111 148999999998511000 00122445667889999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+|....+++... .+ ..++.+||||+|...+.+... . ++...+ .+.
T Consensus 141 ~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~---------------------~--~~~~~~--~~~ 185 (366)
T cd03822 141 MSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES---------------------L--KALGGL--DGR 185 (366)
T ss_pred eeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh---------------------h--HhhcCC--CCC
Confidence 974444444321 11 238999999999776654321 0 222222 355
Q ss_pred cEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHH-------HHHHHHHCCCceEEEec-cChHHHHH
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAHM 472 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~~ 472 (586)
++|+|+|++.+.||++.+++|+.++.+ ++++|+|+|.+....... ++++ ....++.+.+. .+.+++..
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~~ 263 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELPE 263 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHHH
Confidence 899999999999999999999999976 689999999986433222 2222 23357888877 57788889
Q ss_pred HHHhccEEEEcCCCC--CCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 473 IIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
+++.||++++||.+| ++|++++|||++|+|||+++.|+ .+.+.++.+|+++ +++|+++++++|.+++
T Consensus 264 ~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 264 LFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLL 332 (366)
T ss_pred HHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999 7888888899998 9999999999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 551 ATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
++ ++.+.+|++++. .++|||+.++++|.+.+
T Consensus 333 ~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 333 AD--PELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred cC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 98 788888988884 35599999999998865
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=291.28 Aligned_cols=218 Identities=17% Similarity=0.132 Sum_probs=175.0
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (586)
+++..++.+|.++++|++.++.+.+. ++. .+++.+|+||+|++.|.+....
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~-------~~~~~vi~~gvd~~~~~~~~~~-------------------- 232 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKR-------NTKPSIVYPPCDVEELLKLPLD-------------------- 232 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCc-------CCCcEEEcCCCCHHHhcccccc--------------------
Confidence 45667889999999999999998852 221 1278999999998877554210
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C-----CeEEEEEeCCCh----hhHHHHHHHHHHCC-
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILYP- 456 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~-----~v~lvIvG~g~~----~~~~~l~~l~~~~~- 456 (586)
..++.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+++++++.+++
T Consensus 233 ---------~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 233 ---------EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ---------cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 11245799999999999999999999999875 2 599999998742 35677788777654
Q ss_pred -CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCc-ccccc---cCcceEEEccccccc
Q 007873 457 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 531 (586)
Q Consensus 457 -~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~~~~~~~~~~ 531 (586)
+++.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||++++||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 5788888888889999999999999999999999999999999999999999875 57887 89999986
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhcCCHHHHHH
Q 007873 532 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKVSIG 577 (586)
Q Consensus 532 ~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~ 577 (586)
.|+++++++|.+++++. ++.++.+.+++ ..++|||+.+.+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 49999999999999972 33344444443 358899998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=274.82 Aligned_cols=340 Identities=21% Similarity=0.204 Sum_probs=238.9
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++..+.| .||.+.++.+|+++|+++||+|.+++..... .... ...+++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~---------------------~~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFY---------------------ELDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCcc---------------------ccCCcccee
Confidence 68999988765 6999999999999999999999999986432 0100 001123333
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.+...... + .+ ........+.+.++. .+|| +|++|.+. ...+
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~---~~~~ 97 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN------------NKPD-VVISFLTS---LLTF 97 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc------------cCCC-EEEEcCch---HHHH
Confidence 22211000 0 00 000111122222222 2699 77777755 1222
Q ss_pred HHhhccCCCCCCC-ceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 246 LKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 246 l~~~~~~~~~~~~-~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
+.... .+ +|++++.|+........ .......+..++.+|.++++|
T Consensus 98 ~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~s 143 (348)
T cd03820 98 LASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVLT 143 (348)
T ss_pred HHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEeC
Confidence 22211 23 49999999654311000 001113577789999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+..+.... ... ..++.++|||++...+.+.. ..+.+.
T Consensus 144 ~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~~--------------------------------~~~~~~ 180 (348)
T cd03820 144 EEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPSS--------------------------------DLKSKR 180 (348)
T ss_pred HHHHHHhh-----ccC------CCCeEEecCCcChhhccccC--------------------------------CCCCcE
Confidence 99872222 111 23899999999977654320 124579
Q ss_pred EEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
++|+|++.+.||++.+++|++++.+ ++++|+|+|.+. ....++++..+++ .++.+.+. .+++..+++.||++
T Consensus 181 i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 256 (348)
T cd03820 181 ILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIF 256 (348)
T ss_pred EEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEE
Confidence 9999999999999999999999974 789999999987 4455555555554 24444443 56788899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCc-CcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.++
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~~ 324 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELRK 324 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 99999999999999999999999999965 567777877799998 999999999999999998 88888
Q ss_pred HHHHHH--HHhcCCHHHHHHHHHH
Q 007873 560 EMMKNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 560 ~~~~~~--~~~~fsw~~~a~~~~~ 581 (586)
+|++++ ..++|+|+.++++|.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 325 RMGANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHHHhCHHHHHHHhcC
Confidence 999887 4689999999999863
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=274.46 Aligned_cols=353 Identities=20% Similarity=0.228 Sum_probs=249.0
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++.. .||.+.++..++++|.++||+|.++++...... .....|+..+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68899875 488899999999999999999999997632211 0112344444
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.++...... +..........+.+.++. .+|| ++|+|.+...++...
T Consensus 52 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~~ 97 (359)
T cd03808 52 PIPLDRRGI---------------------NPFKDLKALLRLYRLLRK------------ERPD-IVHTHTPKPGILGRL 97 (359)
T ss_pred ecccccccc---------------------ChHhHHHHHHHHHHHHHh------------cCCC-EEEEccccchhHHHH
Confidence 442211000 000011111222233332 2699 899987766666555
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
..+.. ...++++++|+..+...... + .........+..+..+|.++++|+
T Consensus 98 ~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s~ 147 (359)
T cd03808 98 AARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQNE 147 (359)
T ss_pred HHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcCH
Confidence 55432 46788888887543211100 0 000112334666788999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
...+.+.+ .+... ....+.+++||+|...+.+.... ..++.+.|
T Consensus 148 ~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~i 191 (359)
T cd03808 148 DDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPVF 191 (359)
T ss_pred HHHHHHHH---hcCCC----cCceEEecCCCCChhhcCccccc-----------------------------cCCCCcEE
Confidence 99999886 22211 12367888999998877654310 12355899
Q ss_pred EEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHH-HCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
+|+|++.+.||++.+++++..+.+ ++++|+|+|.+..........+.. ....++.+.+. .+++..+++.||++++
T Consensus 192 ~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i~ 269 (359)
T cd03808 192 LFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFVL 269 (359)
T ss_pred EEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEEe
Confidence 999999999999999999999974 789999999987432222111111 12235666655 4567789999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 562 (586)
||..|++|++++|||+||+|||+++.++..|++.++.+|+++ +++|+++++++|.+++.+ ++.+.+++
T Consensus 270 ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~~ 337 (359)
T cd03808 270 PSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARMG 337 (359)
T ss_pred cCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHHH
Confidence 999999999999999999999999999999999999999998 999999999999999998 88888888
Q ss_pred HHHH---HhcCCHHHHHHHHHH
Q 007873 563 KNGM---AQDLSWKVSIGTVQE 581 (586)
Q Consensus 563 ~~~~---~~~fsw~~~a~~~~~ 581 (586)
+++. .++|||+.++++|++
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~~ 359 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLLE 359 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhhC
Confidence 8873 689999999999863
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=281.48 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=178.4
Q ss_pred hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHH
Q 007873 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (586)
Q Consensus 311 ~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (586)
+.....+|.|+++|++.++.+.+. ++.+ .++.+++||+|...+.+...
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~~-------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRIP-------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCCC-------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 444578999999999999998752 2221 27889999998765532110
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hhhHHHHHHHHHHCC--Cc
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EK 458 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~----~~~~~~l~~l~~~~~--~~ 458 (586)
....+.+.++++||++++||++.+|+|+.++.+ ++++|+|+|++. ..+.+++++++.+++ ++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011234789999999999999999999998643 589999999874 234567777777654 57
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcc-ccccc---CcceEEEccccccccCC
Q 007873 459 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 534 (586)
Q Consensus 459 v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~~~~~~~~~~~~v 534 (586)
+.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 888888888889999999999999999999999999999999999999999975 77765 6789974
Q ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 535 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 535 ~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.|+++++++|.+++++. ++.+++|++++. .++|||+.+++++++..
T Consensus 407 --~~~~~la~ai~~ll~~~-~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i 454 (463)
T PLN02949 407 --TTVEEYADAILEVLRMR-ETERLEIAAAARKRANRFSEQRFNEDFKDAI 454 (463)
T ss_pred --CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 49999999999999852 566778888874 47799999999998754
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-30 Score=269.65 Aligned_cols=367 Identities=23% Similarity=0.310 Sum_probs=255.7
Q ss_pred EEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEE
Q 007873 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (586)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (586)
|++++..++|. ..||.+.++..++++|.+.||+|+++++............... . .....
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~------------~-----~~~~~-- 60 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL------------V-----GVERL-- 60 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc------------c-----ccccc--
Confidence 57888887652 4699999999999999999999999998633222110000000 0 00000
Q ss_pred EcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCc-cchHHHH
Q 007873 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPCY 245 (586)
Q Consensus 167 v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~-~~~~~~~ 245 (586)
........ ..........+.......++.. .+++| +|++|... ...+...
T Consensus 61 -~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~----------~~~~d-ii~~~~~~~~~~~~~~ 111 (377)
T cd03798 61 -PVLLPVVP-----------------LLKGPLLYLLAARALLKLLKLK----------RFRPD-LIHAHFAYPDGFAAAL 111 (377)
T ss_pred -ccCcchhh-----------------ccccchhHHHHHHHHHHHHhcc----------cCCCC-EEEEeccchHHHHHHH
Confidence 00000000 0001111222333333333311 13699 77777433 3334444
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
+... .++|+++++|+........ .......++..+..+|.++++|+
T Consensus 112 ~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 112 LKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred HHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCCH
Confidence 4333 4789999999765421100 00123455777889999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
..++.+.+ .+.+ ..++.+++||+|...+.+.... . . .+.+.. .+.+.|
T Consensus 158 ~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~-~--~~~~~~--~~~~~i 205 (377)
T cd03798 158 ALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------E-A--RKLGLP--EDKKVI 205 (377)
T ss_pred HHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------H-H--HhccCC--CCceEE
Confidence 99999886 2222 3489999999999888765421 0 0 222332 355899
Q ss_pred EEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEEE
Q 007873 406 GFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 406 ~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+++|++.+.||++.+++++..+.+ ++++|+|+|.+. ..+.++++.... ..++...+..+.+++..+++.||+++
T Consensus 206 ~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 206 LFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred EEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999999999999999999999976 589999999987 344455554433 34688888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
+||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++++++|.+++++ ++. ++
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~--~~ 349 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLAD--PWL--RL 349 (377)
T ss_pred cchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcC--cHH--HH
Confidence 9999999999999999999999999999999999999999998 999999999999999998 443 44
Q ss_pred HHHH---HHhcCCHHHHHHHHHHHhc
Q 007873 562 MKNG---MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 562 ~~~~---~~~~fsw~~~a~~~~~~~~ 584 (586)
.+++ ..+.|||+..++++.+..+
T Consensus 350 ~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 350 GRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred hHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4443 4689999999999988654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-31 Score=282.25 Aligned_cols=274 Identities=12% Similarity=0.125 Sum_probs=202.4
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEE-EcCCccccccCcccccccCCChhhccccccccCCCCCcCCc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC-IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~-iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
+|| |||+|...+.+.+...... .++|++++ .|.... .. ..+
T Consensus 280 rpD-IVHt~~~~a~l~g~laA~l-------agvpviv~~~h~~~~-~~-----------------------------~~r 321 (578)
T PRK15490 280 KLD-YLSVWQDGACLMIALAALI-------AGVPRIQLGLRGLPP-VV-----------------------------RKR 321 (578)
T ss_pred CCC-EEEEcCcccHHHHHHHHHh-------cCCCEEEEeecccCC-cc-----------------------------hhh
Confidence 699 9999987765665555544 47888654 564111 00 001
Q ss_pred chhhhhHH-------hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccc
Q 007873 306 KINWMKAG-------ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (586)
Q Consensus 306 ~~~~~~~~-------~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 378 (586)
...+.... +..+| ++++|...++.+.+ .++++.+ ++.+||||+|+..|.|..+.
T Consensus 322 ~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~---------- 382 (578)
T PRK15490 322 LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYAD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV---------- 382 (578)
T ss_pred HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHH--HhCCCHH------HEEEEeCCcchhhcCccchh----------
Confidence 11111112 23345 66788888888875 2566655 99999999999988875321
Q ss_pred cccccHHHHHHHHHH--hCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHH
Q 007873 379 VMDAKPLLKEALQAE--VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL 454 (586)
Q Consensus 379 ~~~~~~~~~~~l~~~--~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~ 454 (586)
....+.. .+++ ++.++|+++||+.++||.+.+++++.++.+ ++++|+|+|+|+ ..+.++++..+
T Consensus 383 --------~~~~r~~~~~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~e 450 (578)
T PRK15490 383 --------PHKIWQQFTQKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQ 450 (578)
T ss_pred --------hHHHHHHhhhccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHH
Confidence 1122332 3343 244799999999999999999999988755 789999999998 56778777776
Q ss_pred CC--CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEcccccccc
Q 007873 455 YP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 532 (586)
Q Consensus 455 ~~--~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~ 532 (586)
++ +++.+.+. .+++..+|+.+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++
T Consensus 451 lgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV-------- 520 (578)
T PRK15490 451 LGILERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL-------- 520 (578)
T ss_pred cCCCCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE--------
Confidence 65 45666654 3456789999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCHHHHHHHHHH---HHHhcCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHh
Q 007873 533 AVDPVDVAAVSTTVRR---ALATYGTQALAEMMKNG---MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 533 ~v~~~d~~~la~~I~~---ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~ 583 (586)
++.|++++++.+.. +.+. ......|++++ +.++|||+.++++|.+.+
T Consensus 521 --p~~D~~aLa~ai~lA~aL~~l--l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~ 573 (578)
T PRK15490 521 --DDAQTVNLDQACRYAEKLVNL--WRSRTGICQQTQSFLQERFTVEHMVGTFVKTI 573 (578)
T ss_pred --CCCChhhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 99999998887743 3333 23344566666 468999999999999865
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-31 Score=281.09 Aligned_cols=441 Identities=17% Similarity=0.215 Sum_probs=265.6
Q ss_pred EeccccCccccchHHHHhhhhHHHHHhC-CCeEEEEEecCCCc-cccC-CcceE---EE---EEeCCeeeEEEEEEEEeC
Q 007873 90 VGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQY-KDAW-DTDVV---IE---LKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vvt~~~~~~-~~~~-~~~~~---~~---~~~~~~~~~~~~~~~~~~ 160 (586)
++.++. .+.||+-+++..=|+.+.+. |-+..++.|...+- .... ..... .. ......--.+++.+..++
T Consensus 7 ~swEV~--NKVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVA--NKVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhh--ccCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 344543 37899999999888777654 88888888864321 1110 00000 00 000111234677777888
Q ss_pred CceEEE-EcCc-------cccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhh-cccCCCCCCCCCCCCEE
Q 007873 161 GVDRVF-VDHP-------WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGEDVV 231 (586)
Q Consensus 161 gv~~~~-v~~~-------~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~pDvi 231 (586)
|-+++. +|.. .++...|...| +-++..+.|+.+... |...+..+++.+... . +-++| |
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~~-fgy~~~~~i~~~~~~~~---------~~~~d-V 151 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAII-FGFLVAWFLGEFAEQFD---------DEPAV-V 151 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHHH-HHHHHHHHHHHHHhhcc---------CCCCe-E
Confidence 877654 4432 23334675444 444555566655443 444444444433322 1 12588 9
Q ss_pred EEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCcccccc-CcccccccCCChhhccccccccCC---CCCcCCcch
Q 007873 232 FVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGY---NKPVRGRKI 307 (586)
Q Consensus 232 i~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~ 307 (586)
+|+|+|+++....++++.. .++|+|+|+|.... ||. ..+. ..+...+...+.- .+.-...+.
T Consensus 152 iH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g~-------~~~y~~l~~~~~d~eA~~~~I~~r~ 217 (590)
T cd03793 152 AHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAGN-------VDFYNNLDYFDVDKEAGKRGIYHRY 217 (590)
T ss_pred EEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-ccccccCC-------cccchhhhhcchhhhhhcccchHHH
Confidence 9999999999999999643 58999999997765 653 1111 0111111000100 000011233
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCcccccccc----
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK---- 383 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~---- 383 (586)
..++.+...||.++|||+.++.++.. .++.+++ + |||||+|+..|.+..+. . ... ..++
T Consensus 218 ~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~-~-----~~~-~~~k~ki~ 280 (590)
T cd03793 218 CIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF-Q-----NLH-AQSKEKIN 280 (590)
T ss_pred HHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh-h-----hhh-HHhhhhhh
Confidence 45678889999999999999999996 3677765 3 99999999999775421 0 000 0000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEE-EecCcc-ccCHHHHHHHHhhccc------CC---eEEEEEeCCC-----------
Q 007873 384 PLLKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN---VQIIVLGTGK----------- 441 (586)
Q Consensus 384 ~~~~~~l~~~~gl~~~~~~~~i~~-iGrl~~-~KG~d~Ll~A~~~l~~------~~---v~lvIvG~g~----------- 441 (586)
......++..++++. +.++++| +||++. +||+|.||+|+++|.. .+ +-|+|+=.+.
T Consensus 281 ~f~~~~~~~~~~~~~--d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 281 EFVRGHFYGHYDFDL--DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred HHHHHHHhhhcCCCC--CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 011223455567653 4477777 799998 9999999999999865 22 3344433221
Q ss_pred ---hhhHHHHHHHHHH----------------------------------------------------------------
Q 007873 442 ---KPMEKQLEQLEIL---------------------------------------------------------------- 454 (586)
Q Consensus 442 ---~~~~~~l~~l~~~---------------------------------------------------------------- 454 (586)
+...+.++++..+
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 0111112111000
Q ss_pred -C----CC--ceEEEeccC-------hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCc----ccccc
Q 007873 455 -Y----PE--KARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVE 516 (586)
Q Consensus 455 -~----~~--~v~~~~~~~-------~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~ 516 (586)
+ .+ ++.++..|. +....+++++||++++||++|+||++++|||+||+|||+|+.+|+ .|++.
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~ 518 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIE 518 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhc
Confidence 0 01 344555441 123556999999999999999999999999999999999999998 56665
Q ss_pred cC-cceEEEc-cccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHhcCCHHHHHHHHHHHhcC
Q 007873 517 EG-FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKVSIGTVQEEDSL 585 (586)
Q Consensus 517 ~g-~~G~~~~-~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~~~~~ 585 (586)
++ ..|+.+- +. ..--+.++++|+++|.++++. +.++.+.++. .++.|+|++.++.|.+...+
T Consensus 519 ~~~~~gi~V~~r~----~~~~~e~v~~La~~m~~~~~~---~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 519 DPESYGIYIVDRR----FKSPDESVQQLTQYMYEFCQL---SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred cCCCceEEEecCC----ccchHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 54 3566650 00 000145688888888888854 2333333332 46889999999999986643
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=270.57 Aligned_cols=235 Identities=40% Similarity=0.681 Sum_probs=175.2
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCC-cceEEE--------EEeCCeeeEEEEEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD-TDVVIE--------LKVGDKIEKVRFFH 156 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~ 156 (586)
||++|+.|++|+.++||+|+++..|+++|+++||+|+|++|.|+....... .....+ +.++. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 799999999999999999999999999999999999999999865555431 111111 12221 15677888
Q ss_pred EEeCCceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecC
Q 007873 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 236 (586)
Q Consensus 157 ~~~~gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~ 236 (586)
...+|+++++++++.++.+ ..+|++. +.+|.|+..||.+|+++++++++.+++ +|| |||+||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~hD 141 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCHD 141 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEEC
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEecC
Confidence 8889999999999999876 5699876 788999999999999999999998754 599 999999
Q ss_pred CccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhc
Q 007873 237 WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILE 316 (586)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (586)
|+++++|.+++..++..+.+.++|+++||||+.+||.++...+..+++|.......+. ......+++++.++..
T Consensus 142 W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~------~~~~~~in~lk~gi~~ 215 (245)
T PF08323_consen 142 WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDE------YEFYGQINFLKAGIVY 215 (245)
T ss_dssp GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTT------TEETTEEEHHHHHHHH
T ss_pred chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccc------cccccccCHHHHHHHh
Confidence 9999999999999877777789999999999999999998888888888654322111 1123478999999999
Q ss_pred CCEEEEeCHHHHHHHhcCccCCCcchhhhh
Q 007873 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIR 346 (586)
Q Consensus 317 ad~vitvS~~~~~~l~~~~~~g~~~~~~~~ 346 (586)
||.|+|||+.+++++.. ..+|..++.+++
T Consensus 216 AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l~ 244 (245)
T PF08323_consen 216 ADKVTTVSPTYAREIQT-PEFGEGLEGLLR 244 (245)
T ss_dssp SSEEEESSHHHHHHTTS-HHHHTT-HHHHH
T ss_pred cCEeeeCCHHHHHHHhC-cccCCChHHHhc
Confidence 99999999999999996 345556665554
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=280.81 Aligned_cols=222 Identities=15% Similarity=0.130 Sum_probs=171.9
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+++..++.+|.++++|+..++.+.+. .+.. ..++.+||||+|.+.|.|....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~------~~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEA------AGRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCC------CCCeEEeecccchhhcCCCccc-------------------
Confidence 345677889999999999999998752 2222 2389999999999988765321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHH----HHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll----~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~ 461 (586)
...++ .+.++|+|+|++.+.||++.++ ++++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 00011 2447899999999999999988 45555543 7899999999973 245555432 34777
Q ss_pred EeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHH
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 540 (586)
.+..+ ++..+++.||++|+||+. |++|++++|||+||+|||+|+.++ ..+..++.+|+++ . +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHH
Confidence 76654 356799999999999984 999999999999999999999753 2333445678886 5 8999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 541 AVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 541 ~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
+++++|.+++++ ++.+++|+++++ .++|||+..++++.+.++
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999998 888889999885 478999999999988754
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=277.84 Aligned_cols=209 Identities=16% Similarity=0.125 Sum_probs=161.6
Q ss_pred CCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCC
Q 007873 317 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 396 (586)
Q Consensus 317 ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 396 (586)
+|.|+++|.... .+.. . .+. ..||||++.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq-~L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997777 3321 1 222 237999999998642 122245666
Q ss_pred CCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007873 397 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (586)
Q Consensus 397 ~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 474 (586)
+..+ +.++|+||+.++||++.|++|++.+.+ ++++|+|+|+|+ ..+.+++++.+++.++.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5333 458999999999999999999998865 689999999998 5677888877766445444332 2334699
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcC
Q 007873 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (586)
Q Consensus 475 ~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 554 (586)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ .+|+++++++|.+++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd-- 681 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALAN-- 681 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhC--
Confidence 9999999999999999999999999999999999985 44777888885 38999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHhcC
Q 007873 555 TQALAEMMKNGMAQDLSWKVSIGTVQEEDSL 585 (586)
Q Consensus 555 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~~ 585 (586)
++....+.+ ...|||+.+++++++..++
T Consensus 682 ~~~rl~~~a---~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 682 EPQPLTPEQ---RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred chhhhHHHH---HhhCCHHHHHHHHHHhhcc
Confidence 433322222 4589999999999997654
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=258.45 Aligned_cols=335 Identities=21% Similarity=0.233 Sum_probs=228.8
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++++..+. .||.+.++..|+++|.+.||+|.+++............. ... .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NVK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------chh-------hhcee
Confidence 6899998752 699999999999999999999999997643221110000 000 00000
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCC-ccchHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIPC 244 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~-~~~~~~~ 244 (586)
... .. .+ . .........+.++.. +|| +|++|.. ...++..
T Consensus 58 ~~~--~~-----------~~--------~-----~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~~ 98 (353)
T cd03811 58 VLK--LK-----------SL--------R-----DLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLAL 98 (353)
T ss_pred eee--cc-----------cc--------c-----chhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHHH
Confidence 000 00 00 0 001122233333332 599 8888876 3333332
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
+.. . .++|+++++|+......... .......+..+..+|.++++|
T Consensus 99 ~~~-~-------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~s 143 (353)
T cd03811 99 LAA-R-------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAVS 143 (353)
T ss_pred HHh-h-------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEec
Confidence 222 1 26899999998654211100 000024566788999999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+..++.+.+. ++.+ ..++.+||||+|...+.+.... . . ..+. ..+.++
T Consensus 144 ~~~~~~~~~~--~~~~------~~~~~vi~~~~~~~~~~~~~~~------------------~-~---~~~~--~~~~~~ 191 (353)
T cd03811 144 EGVKEDLLKL--LGIP------PDKIEVIYNPIDIEEIRALAEE------------------P-L---ELGI--PPDGPV 191 (353)
T ss_pred cchhhhHHHh--hcCC------ccccEEecCCcChhhcCcccch------------------h-h---hcCC--CCCceE
Confidence 9999998862 3322 2389999999998887665321 0 0 1222 235589
Q ss_pred EEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007873 405 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.|+ ....++++..+++ .++...+.. +++..+++.||++
T Consensus 192 i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 267 (353)
T cd03811 192 ILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLF 267 (353)
T ss_pred EEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEE
Confidence 9999999999999999999999976 589999999987 3444555555544 356655543 3466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHH---HHHHHHHHHhcCHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV---STTVRRALATYGTQA 557 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l---a~~I~~ll~~~~~~~ 557 (586)
++||.+|++|++++|||++|+|||+++.||+.|++.++.+|+++ +++|++++ ++.+..++++ ++.
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~~ 335 (353)
T cd03811 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PEL 335 (353)
T ss_pred EeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hHH
Confidence 99999999999999999999999999999999999999999998 99999999 4555555555 666
Q ss_pred HHHHHHHH
Q 007873 558 LAEMMKNG 565 (586)
Q Consensus 558 ~~~~~~~~ 565 (586)
+.++++++
T Consensus 336 ~~~~~~~~ 343 (353)
T cd03811 336 RERLAAAA 343 (353)
T ss_pred HHHHHHHH
Confidence 77777754
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=265.12 Aligned_cols=206 Identities=19% Similarity=0.239 Sum_probs=172.8
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+.+..++++|.++++|+..++.+.+. ++ .+..+|+||+|.+.|.+...
T Consensus 145 ~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~~-------------------- 193 (351)
T cd03804 145 IWDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAEE-------------------- 193 (351)
T ss_pred HHHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCCC--------------------
Confidence 344666789999999999999998752 22 15678999999888765421
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
..+.++|+||+.+.||++.+++|+..+. ++|+|+|+|+ ..+.+++ ....++.+.+..+.
T Consensus 194 -------------~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~ 252 (351)
T cd03804 194 -------------KEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSD 252 (351)
T ss_pred -------------CCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCH
Confidence 2357999999999999999999999883 8999999998 3444544 44567999998899
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~ 547 (586)
+++..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~ 321 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVE 321 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHH
Q 007873 548 RALATYGTQALAEMMKNGMAQDLSWKVSIGTV 579 (586)
Q Consensus 548 ~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~ 579 (586)
+++++.. ...+++++++ ++|+|++..+++
T Consensus 322 ~l~~~~~-~~~~~~~~~~--~~~~~~~~~~~~ 350 (351)
T cd03804 322 RFEKNED-FDPQAIRAHA--ERFSESRFREKI 350 (351)
T ss_pred HHHhCcc-cCHHHHHHHH--HhcCHHHHHHHh
Confidence 9999831 3445555543 579999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=252.71 Aligned_cols=225 Identities=16% Similarity=0.223 Sum_probs=170.9
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|++.|.|..+. .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 44555667788999999999999985 56652 23 47899999998875321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----CeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~ 461 (586)
..++++++.+.. +.++|+++||+.++||++.|++|++++.+ + +++++++|.+ .++++. +++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~--l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLE--VPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcC--CCCcEEE
Confidence 345666664322 45799999999999999999999999865 3 4688888742 233332 4456777
Q ss_pred Eecc---ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc------------------Ccc
Q 007873 462 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 520 (586)
Q Consensus 462 ~~~~---~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------------------g~~ 520 (586)
.+.+ +.+++..+|++||++|+||++|+||++++|||+||+|||+++.||+.|++.+ ..+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 7533 5678889999999999999999999999999999999999999999997552 234
Q ss_pred eEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 007873 521 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 521 G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
||.+ ++.|+++|+++|.+++....++.+ .+.....++.|+|+.++++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 6665 889999999999999776433333 2222345799999999999974
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-28 Score=260.96 Aligned_cols=219 Identities=15% Similarity=0.135 Sum_probs=183.3
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (586)
+.+..+..+|.|+++|+..++.+.+. ++...+ ++.+++||++...+.+..
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~---------------------- 225 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP---------------------- 225 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC----------------------
Confidence 34556789999999999999998853 444433 889999999877654321
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C--CeEEEEEeCCChhhHHHHHHHHHHCC--CceEEE
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 462 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~--~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~ 462 (586)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.+++++.+.+ .++.+.
T Consensus 226 ---------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f~ 294 (407)
T cd04946 226 ---------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNFT 294 (407)
T ss_pred ---------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEEe
Confidence 11245789999999999999999999999976 2 57788999988 5566777765443 367888
Q ss_pred eccChHHHHHHHHh--ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCC-CCH
Q 007873 463 AKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VDV 539 (586)
Q Consensus 463 ~~~~~~~~~~~l~~--aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~-~d~ 539 (586)
+..+.+++..+++. ||++++||..|++|++++|||+||+|||+|+.||..|++.++.+|+++ ++ +|+
T Consensus 295 G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~~ 364 (407)
T cd04946 295 GELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPTP 364 (407)
T ss_pred cCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCCH
Confidence 87888888888875 789999999999999999999999999999999999999999999997 65 589
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHH
Q 007873 540 AAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQ 580 (586)
Q Consensus 540 ~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~ 580 (586)
++++++|.+++++ ++.+++|+++++ .++|||+...+++.
T Consensus 365 ~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999998 889999999985 58999999999875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=267.50 Aligned_cols=216 Identities=16% Similarity=0.089 Sum_probs=173.5
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCc-cCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~-~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (586)
....+|.++++|+..++.+.... .++.. ..++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc-------------------------
Confidence 35678999999999888877521 12221 23799999998654443321
Q ss_pred HHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccCh
Q 007873 392 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 467 (586)
Q Consensus 392 ~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (586)
.+....|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+. .
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~-~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGH-R- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCC-C-
Confidence 1234689999999999999999999999865 799999999998 4567888777654 35666553 2
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc-CcccccccCcceEEEccccccccCCCC----CC----
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDP----VD---- 538 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~----~d---- 538 (586)
.+..+++.||++|+||..|+||++++||||||+|||+++.+ |.+|+|.+|.+|+++ ++ .|
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv----------~~~~~~~d~~~~ 453 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLI----------PIDEEEDDEDQI 453 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEE----------eCCccccchhHH
Confidence 35579999999999999999999999999999999999986 899999999999998 52 23
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHhc
Q 007873 539 VAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 539 ~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (586)
+++||++|.++++ ++.+++|++++. +++|||+.++++|++...
T Consensus 454 ~~~la~~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 454 ITALAEKIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8999999999994 456888999885 689999999999987653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=255.38 Aligned_cols=230 Identities=12% Similarity=0.120 Sum_probs=172.4
Q ss_pred hhhhHH-hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 308 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 308 ~~~~~~-~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
.|+... ...+|.|+++|+..++.+.+ .|++. ++++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 445555 57899999999999999875 34431 2389999999999888765311
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEec
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (586)
..+.+++++.|++.++||+|.|++|++++.+ ++++++|+|++.. +..+. ...+ + .+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~--~~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML--DPRLF----GLNG-V--KTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc--chhhc----cccc-e--ecc
Confidence 1133577788899999999999999999976 6899999997652 11111 1111 1 223
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccc-c--------ccccCCC
Q 007873 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF-S--------VDCEAVD 535 (586)
Q Consensus 465 ~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~-~--------~~~~~v~ 535 (586)
.+.+++..+|+.||++++||++|+||++++||||||+|||+|+.||+.|++.++.+|+++..- . ..|=.+.
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 466788899999999999999999999999999999999999999999999999999886210 0 0111222
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHH-HH--HHhcCCHHHHHHHHHHHhc
Q 007873 536 PVDVAAVSTTVRRALATYGTQALAEMMK-NG--MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 536 ~~d~~~la~~I~~ll~~~~~~~~~~~~~-~~--~~~~fsw~~~a~~~~~~~~ 584 (586)
+.|.+++++.+.+++.++.++.++++.. ++ .+++|||+.++++|++.++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4478899999999998743344444443 33 4799999999999998765
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-28 Score=254.55 Aligned_cols=244 Identities=15% Similarity=0.094 Sum_probs=175.8
Q ss_pred CCCEEEEecCCccc---hHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcC
Q 007873 227 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 303 (586)
Q Consensus 227 ~pDvii~~h~~~~~---~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 303 (586)
+|| +||+|..... +.+.++.+. .++|+++++|+..+. ... .+.. ..+..
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~~------~~~~-------------~~~~~ 151 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LLA------LSLG-------------RSHPL 151 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HHh------cccC-------------CCCHH
Confidence 699 8899864432 223333333 478999999976321 000 0000 00000
Q ss_pred Ccch-hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccc
Q 007873 304 GRKI-NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 382 (586)
Q Consensus 304 ~~~~-~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~ 382 (586)
.+.. .+.+..++.+|.++++|+.+++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 152 ~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~-------------- 205 (371)
T PLN02275 152 VRLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE-------------- 205 (371)
T ss_pred HHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch--------------
Confidence 1122 334667788999999999999998751 343 278999994 5667664310
Q ss_pred cHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcc-------------------cCCeEEEEEeCCChh
Q 007873 383 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKP 443 (586)
Q Consensus 383 ~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~-------------------~~~v~lvIvG~g~~~ 443 (586)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+
T Consensus 206 ---------~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-- 271 (371)
T PLN02275 206 ---------I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-- 271 (371)
T ss_pred ---------h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--
Confidence 0 0111 12357889999999999999999998872 2689999999998
Q ss_pred hHHHHHHHHHHCC-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCcEEEcCCcCcccccccC
Q 007873 444 MEKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG 518 (586)
Q Consensus 444 ~~~~l~~l~~~~~-~~v~~~~~-~~~~~~~~~l~~aDi~l~PS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g 518 (586)
..+++++...+++ .++.+.+. .+.++++.+|+.||++++|+. .|++|++++||||||+|||+++.||..|+|.++
T Consensus 272 ~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g 351 (371)
T PLN02275 272 QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDG 351 (371)
T ss_pred CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCC
Confidence 5677777777665 35666664 477889999999999998642 488999999999999999999999999999999
Q ss_pred cceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 519 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 519 ~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
.+|+++ + |+++|+++|.+++
T Consensus 352 ~~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 352 KNGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CCeEEE----------C--CHHHHHHHHHHhC
Confidence 999997 4 7999999998874
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=247.90 Aligned_cols=216 Identities=19% Similarity=0.181 Sum_probs=176.8
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (586)
++...+..+|.++++|+..++.+... ++. ..++.+||||++...+.+...
T Consensus 150 ~~~~~~~~~d~ii~~s~~~~~~l~~~--~~~-------~~~v~~ip~g~~~~~~~~~~~--------------------- 199 (372)
T cd04949 150 YVFENLDKVDGVIVATEQQKQDLQKQ--FGN-------YNPIYTIPVGSIDPLKLPAQF--------------------- 199 (372)
T ss_pred HHHhChhhCCEEEEccHHHHHHHHHH--hCC-------CCceEEEcccccChhhcccch---------------------
Confidence 33344678999999999999988852 221 124899999999877655310
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEec
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAK 464 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~ 464 (586)
..+..+.|+++||+.+.||++.+++|+.++.+ ++++|+|+|.|. ....++++..+.+ +++.+.+
T Consensus 200 ---------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g- 267 (372)
T cd04949 200 ---------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG- 267 (372)
T ss_pred ---------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-
Confidence 01234789999999999999999999999865 789999999998 3445555555443 3455554
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc-CcccccccCcceEEEccccccccCCCCCCHHHHH
Q 007873 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 543 (586)
Q Consensus 465 ~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la 543 (586)
+ .+++..+++.||++|+||..|+||++++|||++|+|||+++.+ |..|++.++.+|+++ +++|+++|+
T Consensus 268 ~-~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la 336 (372)
T cd04949 268 Y-TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALA 336 (372)
T ss_pred C-CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHH
Confidence 3 4457789999999999999999999999999999999999987 899999999999998 999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHH
Q 007873 544 TTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTV 579 (586)
Q Consensus 544 ~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~ 579 (586)
++|.+++++ ++.+.+++++++ +++|||+.++++|
T Consensus 337 ~~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 337 EAIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999999998 888999999985 5899999999875
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=250.41 Aligned_cols=291 Identities=16% Similarity=0.187 Sum_probs=207.6
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
.| +|+.||+|..++|.+++... .++|+++.+|-..+ ... |..+ | .
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~HipfP-----~~e~~~~l--p--------------------~ 177 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPFP-----SSEIFRCL--P--------------------W 177 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCCC-----ChHHHhhC--C--------------------C
Confidence 57 99999999999999988764 57899999995433 111 1111 1 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchh--------hhhccCeeEecCCcccCCcCCCCccccccccCccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN--------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~--------~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 378 (586)
...+...+..+|.|.+.+..+.+.+.+....-+.++. .-+..++.+||||+|++.|.+....
T Consensus 178 ~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~---------- 247 (460)
T cd03788 178 REELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS---------- 247 (460)
T ss_pred hHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC----------
Confidence 1334466777999999998776665542211111110 0012478999999999988764311
Q ss_pred cccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CC----eEEEEEeCCC-------hhhH
Q 007873 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPME 445 (586)
Q Consensus 379 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~----v~lvIvG~g~-------~~~~ 445 (586)
+..+..+++..+... +.++|+++||+.+.||++.+++|++.+.+ ++ ++|+++|.+. ..++
T Consensus 248 -----~~~~~~~~~~~~~~~--~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~ 320 (460)
T cd03788 248 -----PEVQERAAELRERLG--GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELR 320 (460)
T ss_pred -----chhHHHHHHHHHhcC--CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHH
Confidence 112233333344432 45899999999999999999999998865 43 7788887532 2355
Q ss_pred HHHHHHHHHCCC--------ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCCcCcc
Q 007873 446 KQLEQLEILYPE--------KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 512 (586)
Q Consensus 446 ~~l~~l~~~~~~--------~v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 512 (586)
+++++++.+.+. .+.... ..+.+++..+|+.||++++||..|+||++++|||+||+| ||+|+.+|..
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch
Confidence 566655444221 243443 347788899999999999999999999999999999999 9999988888
Q ss_pred cccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 513 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
+. +.+|+++ +|.|++++|++|.+++++. ++.++++.++++ .++|||+..++++++..
T Consensus 401 ~~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 401 EE---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred hh---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 77 4689998 9999999999999999873 355556665553 47899999999998753
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-25 Score=232.68 Aligned_cols=341 Identities=16% Similarity=0.057 Sum_probs=228.7
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++++.. .||...+..+|+++|.++||+|.+++.... .... .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~-~~~~---------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARG-MEAR---------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCc-hhhh---------------------ccccCCCcE
Confidence 899999864 588888899999999999999999987531 1000 001136666
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.++.+..... . ..........+...+..+.+.++. ++|| |||+|.+..++.+.
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~---------~~pD-vv~~~~~~~~~~~~ 107 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR---------FKPD-VVVGFGGYVSGPGG 107 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEECCCcchhHHH
Confidence 66654322110 0 011111121223333333333321 2699 99999987766655
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
...+. .++|++++.|+..+ . ...+..+..+|.+++.+
T Consensus 108 ~~~~~-------~~~p~v~~~~~~~~---------------------------------~---~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 108 LAARL-------LGIPLVIHEQNAVP---------------------------------G---LANKLLARFAKKVATAF 144 (357)
T ss_pred HHHHH-------cCCCEEEEcCCCCc---------------------------------c---HHHHHHHHHhchheECc
Confidence 54443 47899987764221 0 01133466899999998
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+....+ .+ ..++++|+||+|.+.+.+... +.+++++. +.++
T Consensus 145 ~~~~~~--------~~------~~~i~vi~n~v~~~~~~~~~~-----------------------~~~~~~~~--~~~~ 185 (357)
T PRK00726 145 PGAFPE--------FF------KPKAVVTGNPVREEILALAAP-----------------------PARLAGRE--GKPT 185 (357)
T ss_pred hhhhhc--------cC------CCCEEEECCCCChHhhcccch-----------------------hhhccCCC--CCeE
Confidence 843211 22 238999999999876654211 12345442 4578
Q ss_pred EEEEecCccccCHHHHH-HHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEc
Q 007873 405 IGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (586)
Q Consensus 405 i~~iGrl~~~KG~d~Ll-~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~P 483 (586)
|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ . ++.++.+.+. . +....+++.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~g~-~-~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVVPF-I-DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEeeh-H-hhHHHHHHhCCEEEEC
Confidence 99999998888876555 99988865335677889987 34444344 3 4434443433 2 4567899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCcC--------cccccccCcceEEEccccccccCCCCCC--HHHHHHHHHHHHHhc
Q 007873 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (586)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~I~~ll~~~ 553 (586)
+- +++++|||++|+|+|++..++ ..+.+.+..+|+++ +++| +++|+++|++++++
T Consensus 260 ~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~- 324 (357)
T PRK00726 260 AG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD- 324 (357)
T ss_pred CC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC-
Confidence 62 689999999999999987653 23567778899997 7777 99999999999998
Q ss_pred CHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 554 GTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 554 ~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
++.+++|++++. .+.++-+.+++.+++..
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 325 -PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred -HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 888899999885 57899999999988753
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=240.88 Aligned_cols=291 Identities=17% Similarity=0.182 Sum_probs=207.9
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
.| +|..||+|-.++|.+++... ++.++.|.+|-..+ ..+ |.. +| .
T Consensus 128 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHipfP-----~~e~f~~--lp--------------------~ 173 (456)
T TIGR02400 128 GD-IVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIPFP-----SSEIYRT--LP--------------------W 173 (456)
T ss_pred CC-EEEEecchhhHHHHHHHhhC------CCCeEEEEEeCCCC-----ChHHHhh--CC--------------------c
Confidence 46 99999999999999999875 67899999994432 111 111 11 2
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcchh-----hhhccCeeEecCCcccCCcCCCCccccccccCcccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~~-----~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (586)
...+..++..+|.|-+.++.+++.+.+... .|.+.+. --+..++.++|||+|++.|.+....
T Consensus 174 r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~----------- 242 (456)
T TIGR02400 174 RRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK----------- 242 (456)
T ss_pred HHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC-----------
Confidence 244667888999999999999988775322 2221110 0133578999999999999764311
Q ss_pred ccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----CeEEEEEeC-----CC--hhhHH
Q 007873 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEK 446 (586)
Q Consensus 380 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v~lvIvG~-----g~--~~~~~ 446 (586)
.........++++++ +.++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..+++
T Consensus 243 -~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~ 316 (456)
T TIGR02400 243 -PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRR 316 (456)
T ss_pred -hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHH
Confidence 000011223555552 45799999999999999999999999864 3 366887753 22 22444
Q ss_pred HHHHHHHHCCC---c-----eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCCcCccc
Q 007873 447 QLEQLEILYPE---K-----ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 513 (586)
Q Consensus 447 ~l~~l~~~~~~---~-----v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 513 (586)
+++++..+.++ . +.... .++.+++..+|+.||++++||..|+||++++||||||+| +|+|+.+|..+
T Consensus 317 ~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~ 396 (456)
T TIGR02400 317 QVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ 396 (456)
T ss_pred HHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH
Confidence 55555332111 1 22222 346788899999999999999999999999999999999 99999888888
Q ss_pred ccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 514 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
.+. +|+++ +|.|++++|++|.++++++ ++.++++.+.. ....+|+..-++++++..
T Consensus 397 ~l~---~gllV----------nP~d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 397 ELN---GALLV----------NPYDIDGMADAIARALTMP-LEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HhC---CcEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 874 78987 9999999999999999864 34444444433 246799999999998754
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-24 Score=223.26 Aligned_cols=322 Identities=15% Similarity=0.094 Sum_probs=206.2
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||+|++.+ .||.......|+++|.++||+|.+++.... ... ... ...|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~-~~~-------------------~~~--~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRG-LEK-------------------RLV--PKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCc-chh-------------------ccc--ccCCCce
Confidence 789988865 355555567999999999999999986421 110 000 1135666
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.++...+... . ....+.....+.....++.+.+.. ++|| +||+|.+.......
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~---------~~pD-vVi~~~~~~~~~~~ 106 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK---------FKPD-AVIGFGGYVSGPAG 106 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh---------cCCC-EEEEcCCcccHHHH
Confidence 65543221110 0 111111111222233333332321 3699 88888766555444
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
.+.+. .++|++++.|+..+ . ...+...+.+|.++++|
T Consensus 107 ~~~~~-------~~~p~v~~~~~~~~---------------------------------~---~~~~~~~~~~d~ii~~~ 143 (348)
T TIGR01133 107 LAAKL-------LGIPLFHHEQNAVP---------------------------------G---LTNKLLSRFAKKVLISF 143 (348)
T ss_pred HHHHH-------cCCCEEEECCCCCc---------------------------------c---HHHHHHHHHhCeeEECc
Confidence 44443 47788754332110 0 11233466899999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+..++.+. ..+|+||+|...+.+... +++++++. +.++
T Consensus 144 ~~~~~~~~-----------------~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~~--~~~~ 181 (348)
T TIGR01133 144 PGAKDHFE-----------------AVLVGNPVRQEIRSLPVP-----------------------RERFGLRE--GKPT 181 (348)
T ss_pred hhHhhcCC-----------------ceEEcCCcCHHHhcccch-----------------------hhhcCCCC--CCeE
Confidence 97765532 368999998766543211 22456653 4578
Q ss_pred EEEEecCccccCHHH-HHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 405 IGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 405 i~~iGrl~~~KG~d~-Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
|+++|+....|++.. +++|+..+.+.++++++ +|++. . +.+++...+++ +...+.|.......+|+.||+++.
T Consensus 182 i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~ 256 (348)
T TIGR01133 182 ILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVIS 256 (348)
T ss_pred EEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEE
Confidence 999998888899765 55888888665677654 44443 2 46666655554 333334443367789999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcC-------cccccccCcceEEEccccccccCCCCCC--HHHHHHHHHHHHHhc
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 553 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~I~~ll~~~ 553 (586)
++ + |++++|||++|+|+|+++.+| ..+++.++.+|+++ ++.| +++|+++|.+++++
T Consensus 257 ~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~- 321 (348)
T TIGR01133 257 RA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD- 321 (348)
T ss_pred CC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC-
Confidence 65 2 789999999999999998654 23578889999987 7766 99999999999988
Q ss_pred CHHHHHHHHHHHH
Q 007873 554 GTQALAEMMKNGM 566 (586)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (586)
++.+++|++++.
T Consensus 322 -~~~~~~~~~~~~ 333 (348)
T TIGR01133 322 -PANLEAMAEAAR 333 (348)
T ss_pred -HHHHHHHHHHHH
Confidence 888899999874
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-24 Score=222.54 Aligned_cols=334 Identities=14% Similarity=0.057 Sum_probs=216.5
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
+|++.+.. +||...++..|+++|.++||+|.+++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 45666654 6888889999999999999999999876321110 0011356666
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 245 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~ 245 (586)
.++.+.+..+ . .......+..+.+...++.+.+. .++|| +||+|.+..++....
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~---------~~~pD-vI~~~~~~~~~~~~~ 106 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILK---------KFKPD-VVVGFGGYVSGPVGL 106 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCCcchHHHH
Confidence 5543322111 0 01111111112223323323222 13699 888887655544443
Q ss_pred HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCH
Q 007873 246 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325 (586)
Q Consensus 246 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~ 325 (586)
..+. .++|+++..|+... . .+.+..+..+|.|+++|+
T Consensus 107 ~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s~ 143 (350)
T cd03785 107 AAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSFP 143 (350)
T ss_pred HHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcch
Confidence 3333 47898876553211 0 111233556999999999
Q ss_pred HHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE
Q 007873 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 326 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i 405 (586)
...+.+. ..++.+|+||+|...+.+.. . +++++++. +.++|
T Consensus 144 ~~~~~~~--------------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~~~~i 184 (350)
T cd03785 144 ETAKYFP--------------KDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--GKPTL 184 (350)
T ss_pred hhhhcCC--------------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--CCeEE
Confidence 8776511 23899999999977664421 1 55666653 44788
Q ss_pred EEEecCccccCHH-HHHHHHhhcccCCeEE-EEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEc
Q 007873 406 GFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 483 (586)
Q Consensus 406 ~~iGrl~~~KG~d-~Ll~A~~~l~~~~v~l-vIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~P 483 (586)
++.|+....|+.+ .+++|+..+.++++++ +++|+|. .+.+++...++..++.+.+.. +...++|+.||+++.+
T Consensus 185 ~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 185 LVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred EEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEEC
Confidence 8888877777765 4568888887666774 4778874 244555554444567665544 5677899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCcC--------cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHhc
Q 007873 484 SRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 553 (586)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~ 553 (586)
+- +++++|||++|+|+|+++.++ ..+.+.++.+|+++ ++. |+++|+++|.+++++
T Consensus 260 sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 260 AG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC-
Confidence 62 689999999999999987654 24667777899997 766 899999999999987
Q ss_pred CHHHHHHHHHHHHH--hcCCHHHHH
Q 007873 554 GTQALAEMMKNGMA--QDLSWKVSI 576 (586)
Q Consensus 554 ~~~~~~~~~~~~~~--~~fsw~~~a 576 (586)
++.+++|++++.. +.+.-++++
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 325 -PERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred -HHHHHHHHHHHHhcCCCCHHHHHH
Confidence 8888999998853 445544444
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-23 Score=218.69 Aligned_cols=219 Identities=14% Similarity=0.123 Sum_probs=161.5
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
++++|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 56899999999999999986 677655 677766555432 222111 3356788
Q ss_pred hCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007873 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~ 473 (586)
+|++.+. ..++++.|++...|+++.+++++.+. ++++++++|++.....+.++++....+.++.+.+.. +.+.++
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHH
Confidence 8987432 23556678899999999999998754 689998775443335667777766666567776544 346789
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcc----cccccCcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 474 l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
++.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 55532 23333 34443 45899999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHhc
Q 007873 549 ALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (586)
++++ ++.+++|++++. .+.++++.+++.+++..+
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENH 370 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhh
Confidence 9998 888899998874 467899999999988654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-22 Score=230.60 Aligned_cols=292 Identities=17% Similarity=0.213 Sum_probs=203.5
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
-| +|..||+|..++|.+++... +++++.|.+|..++ ..+ |..+ | .
T Consensus 148 ~d-~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiPFP-----s~e~fr~l--p--------------------~ 193 (797)
T PLN03063 148 GD-VVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTPFP-----SSEIYKTL--P--------------------S 193 (797)
T ss_pred CC-EEEEecchhhhHHHHHHHhC------CCCcEEEEecCCCC-----CHHHHhhC--C--------------------C
Confidence 36 99999999999999999875 68999999996543 111 1111 1 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcc--hhh---hhccCeeEecCCcccCCcCCCCccccccccCcccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~--~~~---~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (586)
...+-.++..+|.|-+.+..+++.+.+.+. .|++. ..+ -+..++.+||||+|+..|.+....
T Consensus 194 r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~----------- 262 (797)
T PLN03063 194 RSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL----------- 262 (797)
T ss_pred HHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC-----------
Confidence 234567788999999999999888775221 12211 001 122478999999999988654210
Q ss_pred ccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CC----eEEEEEeC-----CC--hhhHH
Q 007873 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GK--KPMEK 446 (586)
Q Consensus 380 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~----v~lvIvG~-----g~--~~~~~ 446 (586)
.........+++.++ +.++|+++||+++.||++.+++|++.+.+ |+ +.|+.++. ++ ..+++
T Consensus 263 -~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~ 336 (797)
T PLN03063 263 -PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKS 336 (797)
T ss_pred -hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHH
Confidence 000001123344433 45799999999999999999999999864 44 44554442 22 12444
Q ss_pred HHHHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCCcCccc
Q 007873 447 QLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 513 (586)
Q Consensus 447 ~l~~l~~~~~~~--------v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 513 (586)
+++++....+++ +.... .++.+++..+|+.||++++||..|++|++.+||||||+| +|+|..+|..+
T Consensus 337 ~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~ 416 (797)
T PLN03063 337 QVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ 416 (797)
T ss_pred HHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh
Confidence 555554222211 11111 336688889999999999999999999999999999999 99999999988
Q ss_pred ccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 514 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
.+ +.+|+++ +|.|++++|++|.++|+.. ++.++++.+.. ....+||..-++.+++.+
T Consensus 417 ~l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l 475 (797)
T PLN03063 417 SL--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSEL 475 (797)
T ss_pred hh--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHH
Confidence 86 4479997 9999999999999999953 44444444433 357899999998887643
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=209.06 Aligned_cols=216 Identities=16% Similarity=0.130 Sum_probs=162.9
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
.+.+|.++++|+..++++.+ +|++.+ ++.++++++|...+.+..+ +.+++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 56899999999999999886 677755 8899999988765443321 5678899
Q ss_pred hCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcc------cCCeE-EEEEeCCChhhHHHHHHHHHHCCCceEEEeccC
Q 007873 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~------~~~v~-lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (586)
+|++. +.++|+++|+....|++..+++++..+. .++++ ++++|++. ...+.+++... ..++.+.+..+
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 99975 4489999999999999999999998753 35676 56777664 24455555422 23465555443
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC------cCcccccccCcceEEEccccccccCCCCCCHH
Q 007873 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 540 (586)
+++++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.++..|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 5788999999999855 58999999999999999983 334 44455566764 38999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 007873 541 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEE 582 (586)
Q Consensus 541 ~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (586)
+++++|.+++++. ++.+++|++++. ....+++.+++.+.+.
T Consensus 336 ~la~~i~~ll~~~-~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGDK-SDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999999862 567888988885 4567888888777653
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-21 Score=205.67 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=161.5
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+++..++.+|.|+++|+.+.+.+.. ++ .++.+||||+|.+.|.+.... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~---------~~i~~i~ngvd~~~f~~~~~~------------------~ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN---------PNVVLVPNGVDYEHFAAARDP------------------P 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC---------CCEEEcccccCHHHhhccccc------------------C
Confidence 56788899999999999999988775 33 279999999999998765321 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
...+... ..+.++|+|+|++.+.++++.+.+++... ++++|+|+|.++... ....+. ...|+.+.+..+.
T Consensus 195 ~~~~~~~----~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLA----ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHh----cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 0001111 12458999999999988888777666543 789999999983111 112221 1247998888888
Q ss_pred HHHHHHHHhccEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHH
Q 007873 468 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 542 (586)
++++.+++.||++++|+.. +.+|++++||||||+|||+|+.+.+. ..+..+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-----------eCCCHHHH
Confidence 9999999999999999863 36899999999999999999865544 33333444 56799999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 007873 543 STTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 543 a~~I~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (586)
+++|.+++.+..++..++. .+ .++.+||+..++++++.
T Consensus 331 ~~ai~~~l~~~~~~~~~~~-~~-~~~~~sW~~~a~~~~~~ 368 (373)
T cd04950 331 VAAIEKALLEDGPARERRR-LR-LAAQNSWDARAAEMLEA 368 (373)
T ss_pred HHHHHHHHhcCCchHHHHH-HH-HHHHCCHHHHHHHHHHH
Confidence 9999998776433333322 22 67889999999999854
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=188.99 Aligned_cols=165 Identities=27% Similarity=0.436 Sum_probs=142.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcc---cCCeEEEEEeCCChhhHHHHHHHHHHCC--CceEE
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 461 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~---~~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~ 461 (586)
++.++...+.+. +.++|+|+||+.+.||++.+++|+..+. .++++++|+|++. ....+..+...++ .++.+
T Consensus 2 ~~~~~~~~~~~~--~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPD--KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-T--TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCC--CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 566677777654 4589999999999999999999999996 4799999999776 5555666666544 47888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHH
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 541 (586)
.+..+.+++..+++.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888888889999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH
Q 007873 542 VSTTVRRALATYGTQALAEMMKNGMA 567 (586)
Q Consensus 542 la~~I~~ll~~~~~~~~~~~~~~~~~ 567 (586)
++++|.+++++ ++.++.|++++.+
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhcC
Confidence 99999999999 7889999998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-21 Score=205.69 Aligned_cols=219 Identities=13% Similarity=0.097 Sum_probs=157.8
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
...+|.+++.|+..++.+.+ .|++.+ ++.++.|+++.....+. .+.+++++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~--------------------~~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI--------------------DQKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc--------------------cHHHHHHH
Confidence 45799999999999999986 677655 78887777764332221 14466788
Q ss_pred hCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007873 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 473 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~ 473 (586)
+|++.+. ..++++.|+++..||++.+++++.+. .+++++++++++.+...+.+++... ...++...+ |. +.++++
T Consensus 196 ~~l~~~~-~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~-~~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPDK-QTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFK-SNENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCCC-CEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhc-cCCCeEEEe-cc-chHHHH
Confidence 8987542 24566789999999999999986432 2678987664433223344444322 223565554 33 457789
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 474 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 474 l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
|+.||++|. ++.|++++|||++|+|+|+++ .+| ..+++.+.+.|+. ..|++++++.|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999996 467999999999999999996 343 2223445556664 4699999999999
Q ss_pred HHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHhc
Q 007873 549 ALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 549 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (586)
++++ ++.+++|++++. .+.++++.+++++++..+
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIG 370 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhh
Confidence 9998 888999999985 467999999999987553
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-22 Score=227.96 Aligned_cols=291 Identities=17% Similarity=0.225 Sum_probs=202.3
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcch
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (586)
-| +|..||+|..++|.+++... ++.++.|.+|-..+... .|.. +| ..
T Consensus 134 ~d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~----~f~~--lp--------------------~~ 180 (726)
T PRK14501 134 GD-VVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFE----VFRL--LP--------------------WR 180 (726)
T ss_pred CC-EEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChH----HHhh--CC--------------------Ch
Confidence 36 99999999999999998774 68899999996544221 1111 11 12
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcch--hh---hhccCeeEecCCcccCCcCCCCccccccccCccccc
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 380 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~--~~---~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~ 380 (586)
..+-.++..+|.|-+.+..+++.+.+... .|.+-. .+ =+..++.++|||+|++.|.+....
T Consensus 181 ~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------ 248 (726)
T PRK14501 181 EEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------ 248 (726)
T ss_pred HHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------
Confidence 34566788999999999998877664221 121100 00 012368999999999999764311
Q ss_pred cccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---hhHHH
Q 007873 381 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PMEKQ 447 (586)
Q Consensus 381 ~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v~lvIvG~g~----~---~~~~~ 447 (586)
.........+++.+ .+.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++++
T Consensus 249 ~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~ 323 (726)
T PRK14501 249 PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKRE 323 (726)
T ss_pred chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHH
Confidence 00001122344443 245799999999999999999999999864 4 47898887431 1 34455
Q ss_pred HHHHHHHCCC--------ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHc-----CCcEEEcCCcCccc
Q 007873 448 LEQLEILYPE--------KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY-----GTVPIVASTGGLVD 513 (586)
Q Consensus 448 l~~l~~~~~~--------~v~-~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~-----G~PvI~s~~gg~~e 513 (586)
++++..+.++ .+. +...++.+++..+|+.||++++||..|+||++++|||+| |.||++...|+..+
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~ 403 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE 403 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH
Confidence 5555433221 122 333457788999999999999999999999999999999 55677777888888
Q ss_pred ccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 514 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
++ +|+++ +|.|++++|++|.++++++..+....+ +++ ....|||+..++++++.+
T Consensus 404 l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~-~~~~~~v~~~~~~~w~~~~l~~l 460 (726)
T PRK14501 404 LA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERM-QAMQERLRRYDVHKWASDFLDEL 460 (726)
T ss_pred hC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHH
Confidence 75 38887 999999999999999986323333222 333 247899999999988743
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=207.99 Aligned_cols=213 Identities=17% Similarity=0.151 Sum_probs=154.4
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+++..++.+|.|+++|+..++.+.+ .|++ +. +.+++|+ +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 34566788899999999999999986 5654 22 7788884 333222211 01123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCc-eEEEe-
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-ARGVA- 463 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~-v~~~~- 463 (586)
..++++++ + +.+++++.|+. .|+.+.+++|++++.+ ++++|+|+|.|+.. .+.++++..+.+.. +.+..
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677776 3 44788888864 6889999999999765 79999999998732 24566666655421 11111
Q ss_pred -----------ccChHHHHHHHHhccEEEE-cCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccC-cceEEEccccc
Q 007873 464 -----------KFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFSV 529 (586)
Q Consensus 464 -----------~~~~~~~~~~l~~aDi~l~-PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~~~~~~~~ 529 (586)
.-...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~----- 370 (425)
T PRK05749 296 EPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI----- 370 (425)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE-----
Confidence 0123467789999999655 67779999999999999999999864 6666666542 467776
Q ss_pred cccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007873 530 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (586)
Q Consensus 530 ~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 566 (586)
.++|+++|+++|.+++++ ++.+++|++++.
T Consensus 371 -----~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~ 400 (425)
T PRK05749 371 -----QVEDAEDLAKAVTYLLTD--PDARQAYGEAGV 400 (425)
T ss_pred -----EECCHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 789999999999999998 888899999885
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=199.78 Aligned_cols=236 Identities=18% Similarity=0.174 Sum_probs=174.0
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
....+|.+++.|...+..+... =+.+ ....+++.+-++|.+-+.+..- +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~---~~~L----~~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKAT---FVSL----SNSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhhh---hhhc----CCCCcceeeccccchhcccccc-------------ccchhcccccce
Confidence 3457889999888888777641 1111 1235888888888777665210 111122222333
Q ss_pred HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc-------CCeEEEEEeCC--------ChhhHHHHHHHHHHCC-
Q 007873 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--------KKPMEKQLEQLEILYP- 456 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-------~~v~lvIvG~g--------~~~~~~~l~~l~~~~~- 456 (586)
+.+.. .....+..+-++++.||++++++|+.++.. ++.+++++|+. ...+.+++.++.++++
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33433 224678899999999999999999998865 35788888842 1357778888888874
Q ss_pred -CceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCC
Q 007873 457 -EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 534 (586)
Q Consensus 457 -~~v~~~-~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 534 (586)
++.+.+ ...+......+++.+...+.....|+||++.+|||+||+|||+++.||..|+|.++.||+++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 234434 33345555557777777766666699999999999999999999999999999999999998
Q ss_pred CCCCHH---HHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 535 DPVDVA---AVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 535 ~~~d~~---~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
+| +.+ .+|+++.++.++ ++.+.+|++++. .+.|||+.+.+++....
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~ 465 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVL 465 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 77 666 699999999999 899999999994 56799999999987653
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=179.70 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=96.7
Q ss_pred EEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEecc-ChHHHHHHHHhccEEEEc
Q 007873 407 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 483 (586)
Q Consensus 407 ~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~~l~~aDi~l~P 483 (586)
|+|++.+.||++.+++|+..+.+ ++++++++|.+.................++...+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987422222111122234578777776 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEE
Q 007873 484 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 524 (586)
Q Consensus 484 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~ 524 (586)
|..|++|++++|||++|+|+|+|+.++..|++.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=194.00 Aligned_cols=291 Identities=16% Similarity=0.150 Sum_probs=207.4
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+|-+|-.||+|..++|.+++... ++.++-|.+|-..+ ..+ |..+ | .
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiPFP-----s~eifr~L--P--------------------~ 178 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTPFP-----SADVFNIL--P--------------------W 178 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCCCC-----ChHHHhhC--C--------------------c
Confidence 43399999999999999998874 68899999995433 211 1111 1 2
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcchh-------h-------------------hhccCeeEecCCcc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-------I-------------------IRKTGIKGIVNGMD 358 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~~-------~-------------------~~~~~i~vI~ngvd 358 (586)
...+-.++..+|.|=+.+..+++.+.+.+. .|.+... . =+...+.++|.|||
T Consensus 179 r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID 258 (487)
T TIGR02398 179 REQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTD 258 (487)
T ss_pred hHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEec
Confidence 244567788999999999999888775221 1221100 0 01235899999999
Q ss_pred cCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----Ce
Q 007873 359 VQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NV 432 (586)
Q Consensus 359 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v 432 (586)
++.|.+.... ..-......++++++ +.++|++++|+++.||+...++|++++.+ | ++
T Consensus 259 ~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv 321 (487)
T TIGR02398 259 PERIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKV 321 (487)
T ss_pred HHHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCce
Confidence 9998654211 011122445777776 45799999999999999999999999855 4 58
Q ss_pred EEEEEeCCC-------hhhHHHHHHHHHHCCCc---------eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHH
Q 007873 433 QIIVLGTGK-------KPMEKQLEQLEILYPEK---------ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 496 (586)
Q Consensus 433 ~lvIvG~g~-------~~~~~~l~~l~~~~~~~---------v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEA 496 (586)
.|+++|.+. ..+.+++++++.+.+++ +.+...++.+++..+|+.||++++||..||++++..|+
T Consensus 322 ~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 322 TLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred EEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhH
Confidence 999998764 23566777766654221 23334447788889999999999999999999999999
Q ss_pred HHcCC----cEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhcCC
Q 007873 497 MRYGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLS 571 (586)
Q Consensus 497 ma~G~----PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fs 571 (586)
++|+. |+|.|..+|..+.+. .++++ +|.|++++|++|.++|+.+..+..+++.+.- ....+|
T Consensus 402 va~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d 468 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYD 468 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC
Confidence 99998 999999999987774 46776 9999999999999999985434333333321 234455
Q ss_pred HHHHHHHHHH
Q 007873 572 WKVSIGTVQE 581 (586)
Q Consensus 572 w~~~a~~~~~ 581 (586)
-..=++.+++
T Consensus 469 ~~~W~~~fl~ 478 (487)
T TIGR02398 469 VQRWADEFLA 478 (487)
T ss_pred HHHHHHHHHH
Confidence 5554555544
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-17 Score=174.10 Aligned_cols=208 Identities=17% Similarity=0.115 Sum_probs=150.9
Q ss_pred CceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccC
Q 007873 258 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 337 (586)
Q Consensus 258 ~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~ 337 (586)
++|+|+++|++.+. ++.. ......+++..++.+|.|+++|+.+++.+.+ +
T Consensus 92 ~~k~i~~ihD~~~~-~~~~--------------------------~~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~---~ 141 (333)
T PRK09814 92 QVKIIILIHDIEPL-RFDS--------------------------NYYLMKEEIDMLNLADVLIVHSKKMKDRLVE---E 141 (333)
T ss_pred CCEEEEEECCcHHH-hccc--------------------------cchhhHHHHHHHHhCCEEEECCHHHHHHHHH---c
Confidence 79999999987652 1100 0011356778899999999999999999986 5
Q ss_pred CCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCH
Q 007873 338 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 417 (586)
Q Consensus 338 g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~ 417 (586)
|++.+ ++.+++++.+.....+.. ..+..+.|+|+|++....++
T Consensus 142 g~~~~------~i~~~~~~~~~~~~~~~~-------------------------------~~~~~~~i~yaG~l~k~~~l 184 (333)
T PRK09814 142 GLTTD------KIIVQGIFDYLNDIELVK-------------------------------TPSFQKKINFAGNLEKSPFL 184 (333)
T ss_pred CCCcC------ceEecccccccccccccc-------------------------------cccCCceEEEecChhhchHH
Confidence 66433 666666554331111100 11234689999999954332
Q ss_pred HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCC-----------
Q 007873 418 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF----------- 486 (586)
Q Consensus 418 d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~----------- 486 (586)
.. ..++++|+|+|+|+... ....++.+.+.++.+++..+|+. |+.+++...
T Consensus 185 ~~--------~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~ 246 (333)
T PRK09814 185 KN--------WSQGIKLTVFGPNPEDL---------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYK 246 (333)
T ss_pred Hh--------cCCCCeEEEECCCcccc---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhh
Confidence 11 23679999999997321 23457999999999999988988 776665421
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007873 487 EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (586)
Q Consensus 487 E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 566 (586)
-.+|.++.|+||||+|||+++.+++.|+|+++.+|+++ + +.+++++.+.++. ++.+.+|++|+.
T Consensus 247 ~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~--~~~el~~~l~~~~----~~~~~~m~~n~~ 310 (333)
T PRK09814 247 YNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D--SLEELPEIIDNIT----EEEYQEMVENVK 310 (333)
T ss_pred ccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C--CHHHHHHHHHhcC----HHHHHHHHHHHH
Confidence 25899999999999999999999999999999999997 4 7889999998853 467888999884
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-18 Score=180.69 Aligned_cols=436 Identities=18% Similarity=0.238 Sum_probs=228.8
Q ss_pred EeccccCccccchHHHHhhhhHHHHHhC-CCeEEEEEecCCCccc----cCCcc-eEEE---EEeCCeeeEEEEEEEEeC
Q 007873 90 VGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWDTD-VVIE---LKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vvt~~~~~~~~----~~~~~-~~~~---~~~~~~~~~~~~~~~~~~ 160 (586)
++.++. .+.||+-+++..=|+.+.+. |-+..++.|...+... ..+.. .... ......--.+++.+..++
T Consensus 2 ~sWEVc--NKVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~ 79 (633)
T PF05693_consen 2 VSWEVC--NKVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIP 79 (633)
T ss_dssp EETTTT--S-SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESST
T ss_pred chhhhc--cccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeEC
Confidence 344544 37999999999988887755 8899999986433210 00000 0000 000001124667777788
Q ss_pred CceEEEE-cCccc-------cccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEE
Q 007873 161 GVDRVFV-DHPWF-------LAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 232 (586)
Q Consensus 161 gv~~~~v-~~~~~-------~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii 232 (586)
|.+++.+ |...+ +...|...| +-++..+.||.+. ..|...+..+++.+...... ++.||.
T Consensus 80 G~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~dynea-~~Fgyava~fi~~f~~~~~~---------~~~Via 147 (633)
T PF05693_consen 80 GRPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGDYNEA-VMFGYAVAWFIEEFYKFYEE---------KPKVIA 147 (633)
T ss_dssp T--EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HHHHHH-HHHHHHHHHHHHHHHHH-S----------SEEEEE
T ss_pred CcCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcchhHH-HHHHHHHHHHHHHHHHhhcC---------CCcEEE
Confidence 8886644 43332 233564333 2222222222222 22333444444444333221 478899
Q ss_pred EecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccC-cc------cccccCCChhhccccccccCCCCCcCCc
Q 007873 233 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA-FE------DFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 233 ~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~-~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
|+|+|+++...+++++.. ..+.+|||.|.... ||+- .+ .+...+...+... .-...
T Consensus 148 HfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~ 210 (633)
T PF05693_consen 148 HFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYH 210 (633)
T ss_dssp EEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HH
T ss_pred EechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHhhcCCCcHHHHhhccCccccccC----------ccchH
Confidence 999999999888888765 68999999997654 4321 01 1111111111100 00112
Q ss_pred chhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHH
Q 007873 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (586)
Q Consensus 306 ~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (586)
+...++.+...||++.|||+-++.+-.. ++.++.=.|+|||+++..|.....- ..-...
T Consensus 211 k~~iEraaA~~AdvFTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~ef-----------qnl~~~ 269 (633)
T PF05693_consen 211 KHSIERAAAHYADVFTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHEF-----------QNLHAK 269 (633)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTHH-----------HHHHHH
T ss_pred HHHHHHHHHHhcCeeeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchHH-----------HHHHHH
Confidence 4566788889999999999999888663 2223344788999999877654310 011223
Q ss_pred HHHHHH----HH-hCC-CCC-CCCcEEEEEecCc-cccCHHHHHHHHhhccc------CC---eEEEEEeCCC-------
Q 007873 386 LKEALQ----AE-VGL-PVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGK------- 441 (586)
Q Consensus 386 ~~~~l~----~~-~gl-~~~-~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~------~~---v~lvIvG~g~------- 441 (586)
.|+.++ .. +|- .-+ ++...|..+||.+ ..||+|.+|||+.+|.. .+ +-|+|+=...
T Consensus 270 ~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~ 349 (633)
T PF05693_consen 270 AKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVES 349 (633)
T ss_dssp HHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHH
T ss_pred HHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHH
Confidence 344333 22 231 222 2456678889998 69999999999999853 23 3355543321
Q ss_pred -------hhhHHHHHHHHH-------------------------------------------------------------
Q 007873 442 -------KPMEKQLEQLEI------------------------------------------------------------- 453 (586)
Q Consensus 442 -------~~~~~~l~~l~~------------------------------------------------------------- 453 (586)
+..++.+.++.+
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 001100000000
Q ss_pred --H------CCC--ceEEEeccCh-------HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccc
Q 007873 454 --L------YPE--KARGVAKFNI-------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516 (586)
Q Consensus 454 --~------~~~--~v~~~~~~~~-------~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 516 (586)
+ ..+ ++.++..|.. -...+++.+||+.|+||++||+|.+.+|+.++|+|.|+|+..|+...+.
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~ 509 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQ 509 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHH
Confidence 0 011 3555555521 1234699999999999999999999999999999999999988765554
Q ss_pred c-----CcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc---CHHHHHHHHHHH--HHhcCCHHHHHHHHHHHhc
Q 007873 517 E-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 517 ~-----g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~---~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~~ 584 (586)
+ ...|+.+ .--...+.++.++.|.+.+..+ .+.++..++.++ +++.++|+.+...|.+..+
T Consensus 510 ~~~~~~~~~GV~V-------vdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~ 580 (633)
T PF05693_consen 510 EHIEDPEEYGVYV-------VDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYD 580 (633)
T ss_dssp TTS-HHGGGTEEE-------E-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHH
T ss_pred HhhccCcCCcEEE-------EeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3 3456655 1112344666666666655443 133444444444 5789999999999988654
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-17 Score=172.09 Aligned_cols=200 Identities=18% Similarity=0.177 Sum_probs=140.8
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 391 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (586)
..+.+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+...+ ....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~~------------------~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELAK------------------KELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhhc------------------cchhh
Confidence 346789999999999999886 677755 899999985 54333221110 11224
Q ss_pred HHhCCCCCCCCcEEEEEecCcc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHC---CCceEEEecc
Q 007873 392 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 465 (586)
Q Consensus 392 ~~~gl~~~~~~~~i~~iGrl~~---~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 465 (586)
+.++++. +..++++.||... .||++.+++|+..+.+.++++++.|.+. ..+.+++...++ ..++.+....
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 5667753 3367788999875 7999999999999864457777766655 344555554444 2456665544
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccCcceEEEccccccccCCCCCCHHHHHH
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 544 (586)
...++..+++.||++|.||- | ++.|||++|+|+|+++. +...+.+++|. ++. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 55677889999999999984 4 57999999999999974 44667766543 332 2347999999
Q ss_pred HHHHHHHhcCHHHHHHHH
Q 007873 545 TVRRALATYGTQALAEMM 562 (586)
Q Consensus 545 ~I~~ll~~~~~~~~~~~~ 562 (586)
+|.+++++ +..+..|.
T Consensus 330 ~i~~ll~~--~~~~~~~~ 345 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS 345 (363)
T ss_pred HHHHHhcC--chhhhcCC
Confidence 99999987 55555553
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-17 Score=175.88 Aligned_cols=197 Identities=17% Similarity=0.100 Sum_probs=137.0
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
..+.+|.+++.|+..++.+.+ +|+ ++.++.|.+..... +.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~~-~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAIP-LLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhcc-ccc-------------------ChHHHHH
Confidence 466789999999988888764 333 24444454432211 100 1445677
Q ss_pred HhCCCCCCCCcEE-EEEe-cCccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHC-CCceEEEeccC
Q 007873 393 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 466 (586)
Q Consensus 393 ~~gl~~~~~~~~i-~~iG-rl~~~-KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 466 (586)
+++++.+ .+++ ++.| |..+. ++++.+++|++.+.+ ++++++++|.+.. ..+.++++..++ +.++.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-RREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-hHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888643 3554 4445 44444 457999999998864 6899999876332 455566665554 323322 22
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-----------------CCcCcccccccCc--ceEEEccc
Q 007873 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 527 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~~~~~~ 527 (586)
+++..+|+.||+++.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++.
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 323 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQ--- 323 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcC---
Confidence 45678999999999987 88999999999999987 4566777777653 44554
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 007873 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 565 (586)
Q Consensus 528 ~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~ 565 (586)
+..|++++++.+.++++| ++.+++|++++
T Consensus 324 -------~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~ 352 (380)
T PRK00025 324 -------EEATPEKLARALLPLLAD--GARRQALLEGF 352 (380)
T ss_pred -------CCCCHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 778999999999999998 88888888875
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=174.90 Aligned_cols=216 Identities=18% Similarity=0.145 Sum_probs=152.2
Q ss_pred cCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHHHh
Q 007873 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (586)
Q Consensus 316 ~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 394 (586)
.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+... ....+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~~------------------~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEIA------------------YSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhhc------------------cchhHHHhc
Confidence 589999999999999986 577755 899999997 4322211110 023455566
Q ss_pred CCCCCCCCcEEEEEe-cCc-cccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHH
Q 007873 395 GLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (586)
Q Consensus 395 gl~~~~~~~~i~~iG-rl~-~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (586)
+. +.+++++.+ |.+ ..||++.+++|+.++.+ ++++++++|.+.......+.+.. ....++.+.........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 53 224555555 543 45899999999999864 58899988655432333333322 22346777766666667
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
..+++.||+++.+| |..++|||+||+|||++ +.|+..|++.++ .++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHH
Confidence 78999999999887 66789999999999996 678888988866 55553 47999999999999
Q ss_pred HHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 007873 550 LATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 550 l~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (586)
+++ ++.+++|+.+. +....+++++++.+.++
T Consensus 332 l~~--~~~~~~~~~~~~~~g~~~a~~ri~~~l~~~ 364 (365)
T TIGR00236 332 LTD--PDEYKKMSNASNPYGDGEASERIVEELLNH 364 (365)
T ss_pred HhC--hHHHHHhhhcCCCCcCchHHHHHHHHHHhh
Confidence 988 77777777654 23445667777666553
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.1e-17 Score=185.48 Aligned_cols=291 Identities=17% Similarity=0.214 Sum_probs=199.7
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
-| +|..||+|..++|.+++... +++++-|.+|-.++ ..+ |..+ | .
T Consensus 232 gD-~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiPFP-----s~Eifr~L--P--------------------~ 277 (934)
T PLN03064 232 GD-VVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTPFP-----SSEIHRTL--P--------------------S 277 (934)
T ss_pred CC-EEEEecchhhHHHHHHHHhC------CCCcEEEEecCCCC-----ChHHHhhC--C--------------------c
Confidence 36 99999999999999999875 68999999995443 211 1111 1 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcch--hhh---hccCeeEecCCcccCCcCCCCccccccccCcccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~--~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (586)
...+-.++..||.|=+.+..++..+.+.+. .|.+.. .+. +..++.++|-|||+..|......
T Consensus 278 r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~----------- 346 (934)
T PLN03064 278 RSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET----------- 346 (934)
T ss_pred HHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC-----------
Confidence 244567788999999999999988875321 122211 000 12357788999999888643210
Q ss_pred ccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CC----eEEEEE-----eCCC--hhhHH
Q 007873 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVL-----GTGK--KPMEK 446 (586)
Q Consensus 380 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~----v~lvIv-----G~g~--~~~~~ 446 (586)
..-.....+++++++ ++++|+.++|+++.||+...++|+.+|.+ |+ +.|+-+ |+++ ..++.
T Consensus 347 -~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~ 420 (934)
T PLN03064 347 -PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTS 420 (934)
T ss_pred -hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHH
Confidence 001112345666654 44799999999999999999999998754 44 334433 2332 12444
Q ss_pred HHHHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC----cEEEcCCcCccc
Q 007873 447 QLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVD 513 (586)
Q Consensus 447 ~l~~l~~~~~~~--------v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e 513 (586)
++.++..+.+.+ +.... .++.+++..+|+.||++++||..|+++++.+|||+|+. ++|.|...|..+
T Consensus 421 ~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~ 500 (934)
T PLN03064 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQ 500 (934)
T ss_pred HHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHH
Confidence 555555443311 22222 24678888999999999999999999999999999954 455588888887
Q ss_pred ccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 007873 514 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEE 582 (586)
Q Consensus 514 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (586)
.+ +..++++ +|.|++++|++|.++|+.. ++.++++.+..+ ...+||..-++.+++.
T Consensus 501 ~L--~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~ 558 (934)
T PLN03064 501 SL--GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSE 558 (934)
T ss_pred Hh--CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHH
Confidence 77 3468887 9999999999999999852 444455444443 4778988888877654
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.8e-16 Score=157.81 Aligned_cols=218 Identities=28% Similarity=0.447 Sum_probs=166.6
Q ss_pred cCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhC
Q 007873 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (586)
Q Consensus 316 ~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 395 (586)
..+.+++.++.....+.. ... ..++.+++|+++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~---------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPAR---------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCccc---------------------------cC
Confidence 478899999887555443 111 12688899999988776520 11
Q ss_pred CCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007873 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 471 (586)
Q Consensus 396 l~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 471 (586)
+..+.....++++||+.+.||++.+++++..+.. +++.++++|.+... ...+.++..++. .++.+.+..+.++..
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 1111113689999999999999999999999976 34899999999843 233444444443 457776666656666
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHH
Q 007873 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (586)
Q Consensus 472 ~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~ 551 (586)
.+++.||++++||.+|++|++++|||++|+|||+++.++..|++.++.+|+++ .+.|++++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 79999999999999999999999999999999999999999999998888864 66689999999999998
Q ss_pred hcCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHh
Q 007873 552 TYGTQALAEMMKNG---MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 552 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~~ 583 (586)
+ .+.++.+.+++ ....|+|+..++++.+..
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELY 374 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 8 55566665422 237999999999877654
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.4e-16 Score=153.07 Aligned_cols=204 Identities=15% Similarity=0.148 Sum_probs=152.5
Q ss_pred hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHH
Q 007873 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (586)
Q Consensus 311 ~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (586)
+.+-..||.+++.|.+..+.+.+. ++. ..+.+++...+++.+
T Consensus 217 ~~~G~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l---------------------------- 258 (465)
T KOG1387|consen 217 QSAGSKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL---------------------------- 258 (465)
T ss_pred HhccccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------
Confidence 444568999999999999888752 222 256666666655433
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHH-HHHHHHhhccc------CCeEEEEEeCCC----hhhHHHHHHHHHHCC--C
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--E 457 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d-~Ll~A~~~l~~------~~v~lvIvG~g~----~~~~~~l~~l~~~~~--~ 457 (586)
....+- ++.+.+.++++|.+.|+|+.. +=++|+..... ++++|+|+|+-. .+..+.++++++++. .
T Consensus 259 ks~~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~ 337 (465)
T KOG1387|consen 259 KSKFGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPK 337 (465)
T ss_pred HHHhcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCcc
Confidence 222222 344668999999999999999 33556555444 479999999843 345566777777654 4
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC-ccccccc---CcceEEEccccccccC
Q 007873 458 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE---GFTGFQMGSFSVDCEA 533 (586)
Q Consensus 458 ~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~---g~~G~~~~~~~~~~~~ 533 (586)
++.+....+-+.+..+|..|.+.+..-..|.||+.+.|+||+|+-+|+.+.|| .-|+|.+ ..+||+.
T Consensus 338 ~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla--------- 408 (465)
T KOG1387|consen 338 HVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA--------- 408 (465)
T ss_pred ceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec---------
Confidence 67777777778888999999999999999999999999999999999999777 5667754 4679974
Q ss_pred CCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007873 534 VDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (586)
Q Consensus 534 v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 566 (586)
.+.++.|+++.+++... .+.+-.|+++++
T Consensus 409 ---~t~~EYaE~iLkIv~~~-~~~r~~~r~~AR 437 (465)
T KOG1387|consen 409 ---PTDEEYAEAILKIVKLN-YDERNMMRRNAR 437 (465)
T ss_pred ---CChHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 67889999999999873 444667777774
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-13 Score=137.30 Aligned_cols=299 Identities=17% Similarity=0.226 Sum_probs=192.6
Q ss_pred CCCEEEEecCCc--cchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCC
Q 007873 227 GEDVVFVANDWH--TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (586)
Q Consensus 227 ~pDvii~~h~~~--~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 304 (586)
.+| +|..++-+ ..++.|++...+ .+++.+...||..|. . . +.+..|...|+.
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~----------l~~~~g~~h~lV- 156 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------Q----------LKLKLGFQHPLV- 156 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------H----------HHhhcCCCCchH-
Confidence 589 55555533 345566666554 699999999998872 0 0 011122223332
Q ss_pred cchhhh-hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-----cccCC----cCCCCcccccccc
Q 007873 305 RKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-----MDVQE----WNPLTDKYIGVKY 374 (586)
Q Consensus 305 ~~~~~~-~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-----vd~~~----~~p~~~~~~~~~~ 374 (586)
+..+|+ +..-+.||.-+||++.+++++.. .+|+. +..+++.- .+.++ |.+.... +.+|
T Consensus 157 ~l~~~~E~~fgk~a~~nLcVT~AMr~dL~q--nWgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d--~~~f 224 (444)
T KOG2941|consen 157 RLVRWLEKYFGKLADYNLCVTKAMREDLIQ--NWGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGD--HSPF 224 (444)
T ss_pred HHHHHHHHHhhcccccchhhHHHHHHHHHH--hcCCc--------eeEEEecCCCCCCCchhHHHHHHhhhccc--cchh
Confidence 234444 55667899999999999999986 36754 33444321 11111 2111110 0001
Q ss_pred CccccccccHHHHHHHHHHhC--C-C-CCCCCcEEEEEecCccccCHHHHHHHHhhcc-----c----CCeEEEEEeCCC
Q 007873 375 DASTVMDAKPLLKEALQAEVG--L-P-VDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTGK 441 (586)
Q Consensus 375 ~~~~~~~~~~~~~~~l~~~~g--l-~-~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~-----~----~~v~lvIvG~g~ 441 (586)
-+ ...+.+.....++-++.. . . ..+...+++......+..++.+|++|+.... + |.+-.+|.|+|+
T Consensus 225 ~a-r~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP 303 (444)
T KOG2941|consen 225 RA-REPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP 303 (444)
T ss_pred hh-cccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc
Confidence 11 122445555555554443 1 0 0112346777778899999999999998431 1 578888999998
Q ss_pred hhhHHHHHHHHHHCC-CceEEEe-ccChHHHHHHHHhccEEEE--cCCC-CCCcHHHHHHHHcCCcEEEcCCcCcccccc
Q 007873 442 KPMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILI--PSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516 (586)
Q Consensus 442 ~~~~~~l~~l~~~~~-~~v~~~~-~~~~~~~~~~l~~aDi~l~--PS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 516 (586)
.++...+...+++ .++.... +...++.+.+++.||+.|. +|.. =-.|++++.-..||+||++-+...+.|+|+
T Consensus 304 --lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVk 381 (444)
T KOG2941|consen 304 --LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVK 381 (444)
T ss_pred --hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHh
Confidence 3333333333333 2444444 4477888899999998765 4433 358999999999999999999999999999
Q ss_pred cCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcC--HHHHHHHHHHHHH-hcCCHHHHHHH
Q 007873 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMA-QDLSWKVSIGT 578 (586)
Q Consensus 517 ~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~--~~~~~~~~~~~~~-~~fsw~~~a~~ 578 (586)
+++||++| +|.++|++.+..+.+++. ...+.+..+|.++ +...|+..=++
T Consensus 382 h~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 382 HGENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWER 434 (444)
T ss_pred cCCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHH
Confidence 99999998 899999999999999652 4567788888764 56677665444
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-15 Score=136.77 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=95.5
Q ss_pred CcEEEEEecCccccCHHHHHH-HHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 402 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~-A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
.++|+++|++.+.||++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+++.. +++.++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999865 7899999999874 24444 22 258888877 57888999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 479 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
+++.|+. .|+++++++|||++|+|||+++. +..+++.....|++ -++|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999996 57899999999999999999999 67777766667765 378999999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.7e-13 Score=144.51 Aligned_cols=210 Identities=14% Similarity=0.064 Sum_probs=128.3
Q ss_pred hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHH
Q 007873 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (586)
Q Consensus 311 ~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (586)
+...+.+|.|++.++...+.+.. +|+ +..++.|++......... .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 34456899999999988877764 333 455666766322111001 14456
Q ss_pred HHHhCCCCCCCCcEEEEE-e-cCcc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEe
Q 007873 391 QAEVGLPVDRNIPVIGFI-G-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 463 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~i-G-rl~~-~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~ 463 (586)
++++|++.+ .++|++. | |..+ .|++..+++|++.+.+ +++++++.+.+.. ..+.++++...++ ..+...
T Consensus 182 r~~lgl~~~--~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDHN--GETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCCC--CCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 778888643 4677655 3 7777 7999999999999865 6888877554321 3344555544442 223322
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccC-----cce---EEEccccccccCC
Q 007873 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEG-----FTG---FQMGSFSVDCEAV 534 (586)
Q Consensus 464 ~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g-----~~G---~~~~~~~~~~~~v 534 (586)
.. ....+|+.||++|.+| |.+.+|+|++|+|+|... +..+...+... ..+ ++.|.-.+..-.-
T Consensus 258 --~~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q 329 (385)
T TIGR00215 258 --DG-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQ 329 (385)
T ss_pred --Cc-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcC
Confidence 22 3456999999999999 888889999999998883 22222211110 000 0111111111112
Q ss_pred CCCCHHHHHHHHHHHHHhcCH----HHHHHHHHHH
Q 007873 535 DPVDVAAVSTTVRRALATYGT----QALAEMMKNG 565 (586)
Q Consensus 535 ~~~d~~~la~~I~~ll~~~~~----~~~~~~~~~~ 565 (586)
+.-+++.+++.+.+++++ + +.++++.+..
T Consensus 330 ~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~ 362 (385)
T TIGR00215 330 EECTPHPLAIALLLLLEN--GLKAYKEMHRERQFF 362 (385)
T ss_pred CCCCHHHHHHHHHHHhcC--CcccHHHHHHHHHHH
Confidence 446799999999999988 5 5555555544
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-12 Score=141.77 Aligned_cols=162 Identities=14% Similarity=0.069 Sum_probs=133.9
Q ss_pred CcEEEEEe--cCccccCHHHHHHHHhhccc--CCeEEEEEeCCCh-hhHHHHHHHHHHCC--------------------
Q 007873 402 IPVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYP-------------------- 456 (586)
Q Consensus 402 ~~~i~~iG--rl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~-~~~~~l~~l~~~~~-------------------- 456 (586)
...+++++ |+ +.|.++.+|+|+.++.. |+++|.+.|.+.. .+.+.++++.++++
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 35788888 99 99999999999999954 8999999998863 34455544433321
Q ss_pred -----------CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEc
Q 007873 457 -----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMG 525 (586)
Q Consensus 457 -----------~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~ 525 (586)
..+.+.+..+...+...+..+.++|.+|..|+++ .++||+++|+|+| .-|..++|.++.||+++
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li- 472 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII- 472 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe-
Confidence 2233333334446778999999999999999999 9999999999999 55679999999999997
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 007873 526 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEE 582 (586)
Q Consensus 526 ~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (586)
+|..+|+++|..+|.+ +..+.++...++ +++||-+++.++|.+.
T Consensus 473 -----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 473 -----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred -----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 8999999999999999 889999999885 5899999999998763
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=122.64 Aligned_cols=177 Identities=22% Similarity=0.279 Sum_probs=93.3
Q ss_pred EEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEE
Q 007873 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (586)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (586)
|+++... .|. .||+++++.+|+++|+++||+|+++++......... .. ...
T Consensus 1 ili~~~~-~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---------------~~-----------~~~ 51 (177)
T PF13439_consen 1 ILITNIF-LPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---------------LV-----------KIF 51 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---------------EE-----------EE-
T ss_pred CEEEEec-CCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---------------cc-----------cee
Confidence 4555554 453 899999999999999999999999998743322210 00 000
Q ss_pred EcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHHH
Q 007873 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYL 246 (586)
Q Consensus 167 v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l 246 (586)
...+.. ......+.......+.+.++.. +|| |||+|.+.........
T Consensus 52 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~~ 98 (177)
T PF13439_consen 52 VKIPYP--------------------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALLA 98 (177)
T ss_dssp --TT-S--------------------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHHH
T ss_pred eeeecc--------------------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHHh
Confidence 000000 0111112222334444555544 499 8899987665544333
Q ss_pred HhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHH
Q 007873 247 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPH 326 (586)
Q Consensus 247 ~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~ 326 (586)
.. ++|+++++|+......+. . ....+.......+++...+.+|.++++|+.
T Consensus 99 ~~---------~~~~v~~~H~~~~~~~~~-------~-------------~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~ 149 (177)
T PF13439_consen 99 CR---------KVPIVYTIHGPYFERRFL-------K-------------SKLSPYSYLNFRIERKLYKKADRIIAVSES 149 (177)
T ss_dssp HH---------CSCEEEEE-HHH--HHTT-------T-------------TSCCCHHHHHHCTTHHHHCCSSEEEESSHH
T ss_pred cc---------CCCEEEEeCCCccccccc-------c-------------cccchhhhhhhhhhhhHHhcCCEEEEECHH
Confidence 21 679999999865310000 0 000000011123344557899999999999
Q ss_pred HHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcC
Q 007873 327 YAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN 363 (586)
Q Consensus 327 ~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~ 363 (586)
.++++.+ +|++.+ ++.+||||+|++.|.
T Consensus 150 ~~~~l~~---~~~~~~------ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 150 TKDELIK---FGIPPE------KIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHH---HT--SS-------EEE----B-CCCH-
T ss_pred HHHHHHH---hCCccc------CCEEEECCccHHHcC
Confidence 9999996 666644 999999999998773
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.9e-11 Score=130.00 Aligned_cols=295 Identities=17% Similarity=0.203 Sum_probs=168.7
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcch
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (586)
+|-+|..||+|-.++|.+++... +++++.|.+|-.++.. +.|..+ ...
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~----e~fr~l----------------------P~r 188 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIPFPSS----EIFRCL----------------------PWR 188 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S----H----HHHTTS----------------------TTH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecCCCCH----HHHhhC----------------------CcH
Confidence 44399999999999999999875 6899999999644311 111111 123
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCc--cCCCcchhh---h----hccCeeEecCCcccCCcCCCCccccccccCccc
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI---I----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~--~~g~~~~~~---~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 378 (586)
..+-.++..||.|-+.+..+++.+.+.+ ..|++.+.- + +...+.+.|-|+|++.+......
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~---------- 258 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS---------- 258 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC----------
Confidence 4566788899999999999998876532 123321110 0 12357778888888776421100
Q ss_pred cccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC----h---hhH
Q 007873 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 445 (586)
Q Consensus 379 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~----~---~~~ 445 (586)
+.-......++++++- +.++|+-+.|++..||+..=++|+.+|.+ .++.|+=++... + .+.
T Consensus 259 --~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 259 --PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred --hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 0111223456666641 24799999999999999999999998865 468888666522 2 344
Q ss_pred HHHHHHHHH----CCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCCcCcc
Q 007873 446 KQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 512 (586)
Q Consensus 446 ~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 512 (586)
.+++++..+ ++. -|.... ..+.++...+|+.||+++++|..+|+.++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 555555443 331 133332 346678888999999999999999999999999999665 6888878888
Q ss_pred cccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhcCCHHHHHHHHHHH
Q 007873 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 513 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~ 582 (586)
+.+.++ .+++ +|.|++++|++|.++|+.+..+....+.+.. ....+|-..=++.+++.
T Consensus 413 ~~L~~~--al~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~ 471 (474)
T PF00982_consen 413 EQLSEA--ALLV----------NPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRD 471 (474)
T ss_dssp GT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHH
T ss_pred HHcCCc--cEEE----------CCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHH
Confidence 887753 2555 9999999999999999974222222222211 23455555555555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-11 Score=130.76 Aligned_cols=289 Identities=15% Similarity=0.121 Sum_probs=192.8
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
-| +|-.||+|..++|.+++... ++.++-|.+|-..+ ..+ |..+ | .
T Consensus 124 ~D-~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPFP-----s~eifr~L--P--------------------~ 169 (474)
T PRK10117 124 DD-IIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPFP-----TPEIFNAL--P--------------------P 169 (474)
T ss_pred CC-EEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCCC-----ChHHHhhC--C--------------------C
Confidence 36 99999999999999999875 68899999995443 211 1111 1 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcchh--hh----hccCeeEecCCcccCCcCCCCccccccccCccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~~--~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 378 (586)
...+-.++..+|.|-+.++.+++.+.+.+. .|.+... .+ +..++.+.|-|||++.|......
T Consensus 170 r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~---------- 239 (474)
T PRK10117 170 HDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG---------- 239 (474)
T ss_pred hHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc----------
Confidence 244567788999999999999888775221 1222100 01 12367888999998877432110
Q ss_pred cccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC-------hhhH
Q 007873 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPME 445 (586)
Q Consensus 379 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~-------~~~~ 445 (586)
. .......+++.++ +..+|+-+.|++..||+..=++|++.|.+ .++.|+-+.... ..+.
T Consensus 240 --~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~ 311 (474)
T PRK10117 240 --P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (474)
T ss_pred --h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHH
Confidence 0 0111334555554 34799999999999999999999999875 367788666532 2345
Q ss_pred HHHHHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCCcCc
Q 007873 446 KQLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 511 (586)
Q Consensus 446 ~~l~~l~~~~~~~--------v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 511 (586)
.+++++..+.+++ +.... .++.+++..+|+.||++++++..+|+.++..|+.+|-. +.|.|...|.
T Consensus 312 ~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGa 391 (474)
T PRK10117 312 HQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (474)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccch
Confidence 5666655543211 22111 23567777899999999999999999999999999965 3788887777
Q ss_pred ccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhcCCHHHHHHHHHH
Q 007873 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 512 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~ 581 (586)
.+.+.+ .+++ +|.|++++|++|.++|+.+..+..+++.+.- ....+|-..=++.+++
T Consensus 392 A~~L~~---AllV----------NP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~ 449 (474)
T PRK10117 392 ANELTS---ALIV----------NPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFIS 449 (474)
T ss_pred HHHhCC---CeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHH
Confidence 777742 4555 9999999999999999985333333333221 2244444444444443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-10 Score=134.06 Aligned_cols=267 Identities=15% Similarity=0.200 Sum_probs=180.9
Q ss_pred CEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcch
Q 007873 229 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (586)
Q Consensus 229 Dvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (586)
| +|..||+|..++|.+++... +++++.|.+|..++ ..+ |..+ | ..
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFP-----s~eifr~L--P--------------------~r 248 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFP-----SSEIYKTL--P--------------------IR 248 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCCCC-----ChHHHhhC--C--------------------cH
Confidence 7 99999999999999998875 68999999996543 211 1111 1 22
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcchh-----hh----hccCeeEecCCcccCCcCCCCccccccccCc
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~~-----~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 376 (586)
..+-.++..||.|=+.+..+++.+.+.+. .|++.+. -+ +..++.+.|-|+|+..|......
T Consensus 249 ~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-------- 320 (854)
T PLN02205 249 EELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-------- 320 (854)
T ss_pred HHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC--------
Confidence 44567788999999999999988876221 2332211 00 23467788889998877432110
Q ss_pred cccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----CeEEEEEeCCC-------hh
Q 007873 377 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KP 443 (586)
Q Consensus 377 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v~lvIvG~g~-------~~ 443 (586)
..-.....+++++++- ++..+|+-+.|++..||+..=++|+.+|.+ | ++.|+-+.... .+
T Consensus 321 ----~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~ 393 (854)
T PLN02205 321 ----PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKE 393 (854)
T ss_pred ----hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHH
Confidence 0011123345665542 245799999999999999999999999865 3 67777666432 23
Q ss_pred hHHHHHHHHHH----CCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-------------
Q 007873 444 MEKQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT------------- 501 (586)
Q Consensus 444 ~~~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~------------- 501 (586)
++.+++++..+ ++. -|.... .++.+++..+|+.||++++++..+++.++..|+.+|..
T Consensus 394 ~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~ 473 (854)
T PLN02205 394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEP 473 (854)
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccc
Confidence 44455555543 321 122222 23567778899999999999999999999999999854
Q ss_pred ------cEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHH
Q 007873 502 ------VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 557 (586)
Q Consensus 502 ------PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 557 (586)
+.|.|.-.|....+.+ .++ |+|.|++++|++|.++|+.+..+.
T Consensus 474 ~~~~~gvLiLSEfaGaa~~L~~---Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er 522 (854)
T PLN02205 474 STPKKSMLVVSEFIGCSPSLSG---AIR----------VNPWNIDAVADAMDSALEMAEPEK 522 (854)
T ss_pred ccCCCCceEeeeccchhHHhCc---CeE----------ECCCCHHHHHHHHHHHHcCCHHHH
Confidence 2455555555544431 344 499999999999999999853343
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-12 Score=117.33 Aligned_cols=159 Identities=23% Similarity=0.229 Sum_probs=85.3
Q ss_pred chHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccccccCCC
Q 007873 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (586)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~ 180 (586)
||++.++.+|+++|+++||+|+++++..+...+. ...+|+.+..++.+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999875432210 1234666665543321100
Q ss_pred CCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCCCCCCce
Q 007873 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAK 260 (586)
Q Consensus 181 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~p 260 (586)
+. ... +...+...+... ..+|| +||+|++..+++...+++. .++|
T Consensus 54 ---~~----------~~~----~~~~~~~~l~~~----------~~~~D-vv~~~~~~~~~~~~~~~~~-------~~~p 98 (160)
T PF13579_consen 54 ---LR----------LLR----FLRRLRRLLAAR----------RERPD-VVHAHSPTAGLVAALARRR-------RGIP 98 (160)
T ss_dssp ---GG----------HCC----HHHHHHHHCHHC----------T---S-EEEEEHHHHHHHHHHHHHH-------HT--
T ss_pred ---hh----------hHH----HHHHHHHHHhhh----------ccCCe-EEEecccchhHHHHHHHHc-------cCCc
Confidence 00 000 112222222111 12699 9999997766666666634 3899
Q ss_pred EEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc-hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCC
Q 007873 261 VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK-INWMKAGILESDMVLTVSPHYAQELVSGEDKGV 339 (586)
Q Consensus 261 vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~ 339 (586)
+|+++|+...... ..+. .+. ..+.+..+..+|.++++|+..++.+.+ +|+
T Consensus 99 ~v~~~h~~~~~~~------------~~~~--------------~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 99 LVVTVHGTLFRRG------------SRWK--------------RRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp EEEE-SS-T------------------HH--------------HHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred EEEEECCCchhhc------------cchh--------------hHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 9999997432110 0000 011 233467888999999999999999996 677
Q ss_pred cchhhhhccCeeEecCC
Q 007873 340 ELDNIIRKTGIKGIVNG 356 (586)
Q Consensus 340 ~~~~~~~~~~i~vI~ng 356 (586)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 766 99999998
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.3e-09 Score=111.25 Aligned_cols=289 Identities=18% Similarity=0.225 Sum_probs=190.9
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
-| +|..||+|..++|.+++.+. ...++.|.+|-..+ ... |..+ | .
T Consensus 148 gD-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPfP-----ssEvfr~l--P--------------------~ 193 (486)
T COG0380 148 GD-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPFP-----SSEVFRCL--P--------------------W 193 (486)
T ss_pred CC-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCCCC-----CHHHHhhC--c--------------------h
Confidence 47 99999999999999999886 68899999995443 221 1111 1 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccC--C------Ccchhh-hhccCeeEecCCcccCCcCCCCccccccccCcc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDK--G------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~--g------~~~~~~-~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~ 377 (586)
..-+..++..+|.|-+.++.+++.+.+.+.. + +..... =+..++..+|-|+|+..|.-...
T Consensus 194 r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~---------- 263 (486)
T COG0380 194 REEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALK---------- 263 (486)
T ss_pred HHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhc----------
Confidence 2334567789999999999998887753211 1 110000 01136678899999888753321
Q ss_pred ccccccH--HHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hh--
Q 007873 378 TVMDAKP--LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP-- 443 (586)
Q Consensus 378 ~~~~~~~--~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~----~~-- 443 (586)
.+. .-..+++++++- +..+|+-+.|++.-||+..=+.|+.+|.. .++.|+-++... ..
T Consensus 264 ----~~~v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~ 335 (486)
T COG0380 264 ----SPSVQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQ 335 (486)
T ss_pred ----CCchhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHH
Confidence 011 113344555442 35799999999999999999999999975 368888777644 22
Q ss_pred -hHHHHHHHHHH----CCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC----CcEEEcCCc
Q 007873 444 -MEKQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTG 509 (586)
Q Consensus 444 -~~~~l~~l~~~----~~~----~v~~~~-~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G----~PvI~s~~g 509 (586)
+..+++++..+ ++. -+...- ..+.+++.+++..||++++++..|++.++..|+.+|- =|.|-|...
T Consensus 336 ~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 336 ALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 34445554443 331 122222 2366788899999999999999999999999999983 367777776
Q ss_pred CcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhcCCHHHHHHHHHH
Q 007873 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 510 g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~ 581 (586)
|....+.+ .+++ +|.|.+++|++|.++|+....+..+.+.... ...+++-..-+..+++
T Consensus 416 Gaa~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~ 475 (486)
T COG0380 416 GAASELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLD 475 (486)
T ss_pred cchhhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 76666665 4565 9999999999999999974333222222211 1234455555555443
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.23 E-value=5e-11 Score=100.26 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=82.0
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHH
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 558 (586)
+.+.|++.+++++.++|+||||+|+|+++.+++.+++.++.+++.+ +|++++.+.|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~------------~~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY------------NDPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE------------CCHHHHHHHHHHHHCC--HHHH
Confidence 4678999999999999999999999999999999999999999987 4999999999999998 8899
Q ss_pred HHHHHHHH---HhcCCHHHHHHHHHH
Q 007873 559 AEMMKNGM---AQDLSWKVSIGTVQE 581 (586)
Q Consensus 559 ~~~~~~~~---~~~fsw~~~a~~~~~ 581 (586)
+++++++. .++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 99999884 689999999999874
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-10 Score=126.95 Aligned_cols=435 Identities=20% Similarity=0.214 Sum_probs=262.3
Q ss_pred cchHHHHhhhhHHHHHhCCCeEEEEEecCCC-cc-------------ccCC--------------cceEEEEEeCC-eee
Q 007873 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK-------------DAWD--------------TDVVIELKVGD-KIE 150 (586)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~-~~-------------~~~~--------------~~~~~~~~~~~-~~~ 150 (586)
.||+|+..+.....++..|...+-++-+|.+ |. +.|. ..-.+.+...+ ...
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~ 193 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVV 193 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEE
Confidence 4999999999999999999999888877642 21 1111 00112233333 445
Q ss_pred EEEEEEEEeCCceEEEEcCccccccccCC-CCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhc-ccCCCCCCCCCCC
Q 007873 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGK-TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILN-LNSNKYFSGPYGE 228 (586)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~w~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~p 228 (586)
.++.......-+++++.+...--.+.|.+ .-..+|++++ -...+..-.+|+.+.++.+..+. ... ..+.+
T Consensus 194 ~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds---~elRl~Qeyfl~~agvq~I~~~~~~~~-----~~~~~ 265 (750)
T COG0058 194 TLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS---KELRLKQEYFLGSAGVQDILARGHLEH-----HDLDV 265 (750)
T ss_pred EEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc---HHHHHhhhheeeeHHHHHHHHHhhhcc-----ccccc
Confidence 55555555555566766544321111211 1125776543 11112222456667777666552 110 01123
Q ss_pred CEEEEecCCccchHHHHHHh-hccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccC---CCh------hhc
Q 007873 229 DVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN---LPA------QFK 289 (586)
Q Consensus 229 Dvii~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~---l~~------~~~ 289 (586)
- +.|.||-|.+++..-+-+ ..-..|+ ....-++||.|.+.+.+ .|+...+..+. +.. .|.
T Consensus 266 ~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l 344 (750)
T COG0058 266 L-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFL 344 (750)
T ss_pred h-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhh
Confidence 4 778999888775544332 2211111 12456789999886644 45544443211 000 000
Q ss_pred cccccccCC-----CCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcC---ccCCCcchhhhhccCeeEecCCcccCC
Q 007873 290 SSFDFIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG---EDKGVELDNIIRKTGIKGIVNGMDVQE 361 (586)
Q Consensus 290 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~---~~~g~~~~~~~~~~~i~vI~ngvd~~~ 361 (586)
......... ..++.. +++-..++..|..+..||.-..+.+... ..+++. +.+|.-+.||+.+..
T Consensus 345 ~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nvTNGIt~rr 416 (750)
T COG0058 345 PEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNVTNGITPRR 416 (750)
T ss_pred HHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccccCCcCCch
Confidence 000000000 001100 3444556777888888988776665431 122333 348899999999999
Q ss_pred cCCCCccccccccCcc--------------------------ccccccHHHHH----HHHHHhCCCCCCCCcEEEEEecC
Q 007873 362 WNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKE----ALQAEVGLPVDRNIPVIGFIGRL 411 (586)
Q Consensus 362 ~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~~----~l~~~~gl~~~~~~~~i~~iGrl 411 (586)
|.-...+.+.--|+.. .+...+..+|. .+..+.|+..+++...++++-|+
T Consensus 417 Wl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRi 496 (750)
T COG0058 417 WLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRI 496 (750)
T ss_pred hhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhh
Confidence 8544433333334433 11223333443 33455678888889999999999
Q ss_pred ccccCHHHHHHHHhhc----cc---CCeEEEEEeCCC------hhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007873 412 EEQKGSDILAAAIPHF----IK---ENVQIIVLGTGK------KPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 412 ~~~KG~d~Ll~A~~~l----~~---~~v~lvIvG~g~------~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~ 476 (586)
.++|...+.+.-+..+ .+ +.+++++.|+.. +...+.+.+.+...+ .+|.+...++...+..++.+
T Consensus 497 heYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa 576 (750)
T COG0058 497 HEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPA 576 (750)
T ss_pred hhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhccc
Confidence 9999988865544433 32 568889999854 345566666666544 36899999999999999999
Q ss_pred ccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCcccccc--cCcceEEEccccccccC-----CCCC-CHHHHHHHH
Q 007873 477 ADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEA-----VDPV-DVAAVSTTV 546 (586)
Q Consensus 477 aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~-----v~~~-d~~~la~~I 546 (586)
||+-...|+ .|.+|..-+-+|..|.+-|+|-.|...|+.+ .+.|||+||....+.+. .++. +...+...|
T Consensus 577 ~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v 656 (750)
T COG0058 577 ADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEV 656 (750)
T ss_pred ccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHH
Confidence 999999887 5999999999999999999999999999997 88999999965544322 2222 344455555
Q ss_pred HHHHH
Q 007873 547 RRALA 551 (586)
Q Consensus 547 ~~ll~ 551 (586)
..++.
T Consensus 657 ~~~~~ 661 (750)
T COG0058 657 KPVLD 661 (750)
T ss_pred HHHHH
Confidence 55555
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-08 Score=104.56 Aligned_cols=147 Identities=17% Similarity=0.194 Sum_probs=89.0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCH-HHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEecc
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKF 465 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~-d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 465 (586)
+..++.++++. +.++|+.+|.=.--+.+ +.+.+++..+. .++++++ +|... +++.+.. +. ++. ...|
T Consensus 173 ~~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--~~~~~~~----~~-~~~-~~~f 241 (352)
T PRK12446 173 EKGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--LDDSLQN----KE-GYR-QFEY 241 (352)
T ss_pred hHHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--HHHHHhh----cC-CcE-Eecc
Confidence 34456677764 34677666654445555 44455666653 3577664 45432 4433322 12 222 2244
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc-----C----cccccccCcceEEEccccccccCCCC
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDP 536 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~~~~~~~~~~~~v~~ 536 (586)
..+.+..+|+.||++|. =+-++++.|++++|+|.|.-... + ..+.+.+...|..+ .-+.
T Consensus 242 ~~~~m~~~~~~adlvIs----r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~ 309 (352)
T PRK12446 242 VHGELPDILAITDFVIS----RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEED 309 (352)
T ss_pred hhhhHHHHHHhCCEEEE----CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhc
Confidence 44567789999999984 34678899999999999988532 1 22244444455554 0123
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHH
Q 007873 537 VDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 537 ~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
-+++.|++.+.++++| ++.++
T Consensus 310 ~~~~~l~~~l~~ll~~--~~~~~ 330 (352)
T PRK12446 310 VTVNSLIKHVEELSHN--NEKYK 330 (352)
T ss_pred CCHHHHHHHHHHHHcC--HHHHH
Confidence 3689999999999987 55554
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.6e-10 Score=118.97 Aligned_cols=177 Identities=8% Similarity=0.021 Sum_probs=135.2
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHh
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 394 (586)
.+.|.||+.++...+.+.++... ..++.+||-|+=.. .+..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~--~~~~---------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP--FKKD---------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe--eccc----------------------------
Confidence 57899999998877777753211 22566777665311 1111
Q ss_pred CCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007873 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 472 (586)
Q Consensus 395 gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 472 (586)
++....+++++. +..|+++.+|.+ |+++|.| |.+.+ +...|.++ .++ .++.....+..+.+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHH
Confidence 112345666662 889999999866 8999999 87764 45788888 677 4677777887777889
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~ 551 (586)
++..||+++-.|..|++++++.||+..|+|+++-+ +-|..+++.+ |.++ +.+|+++|+++|.++++
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998 4566677776 7777 99999999999999999
Q ss_pred hcCHHHHHH
Q 007873 552 TYGTQALAE 560 (586)
Q Consensus 552 ~~~~~~~~~ 560 (586)
+ +..+++
T Consensus 411 d--~~~~~~ 417 (438)
T TIGR02919 411 D--PNQFRE 417 (438)
T ss_pred C--HHHHHH
Confidence 8 555443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-07 Score=98.80 Aligned_cols=323 Identities=17% Similarity=0.145 Sum_probs=181.8
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCe-EEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~-V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
|+|++...- +||--.....|+++|.++|++ |.++.... .. . .+.....|+.
T Consensus 1 ~~ivl~~gG------TGGHv~pAlAl~~~l~~~g~~~v~~~~~~~-~~-e--------------------~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAGG------TGGHVFPALALAEELAKRGWEQVIVLGTGD-GL-E--------------------AFLVKQYGIE 52 (357)
T ss_pred CeEEEEeCC------CccchhHHHHHHHHHHhhCccEEEEecccc-cc-e--------------------eeeccccCce
Confidence 455555542 788777888899999999996 55542221 00 0 0111112556
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
+..++...+..+ . ...++.....++++..+..+.+.. ++||+|+-+..+.+. .+
T Consensus 53 ~~~I~~~~~~~~--------~--------~~~~~~~~~~~~~~~~~a~~il~~---------~kPd~vig~Ggyvs~-P~ 106 (357)
T COG0707 53 FELIPSGGLRRK--------G--------SLKLLKAPFKLLKGVLQARKILKK---------LKPDVVIGTGGYVSG-PV 106 (357)
T ss_pred EEEEeccccccc--------C--------cHHHHHHHHHHHHHHHHHHHHHHH---------cCCCEEEecCCcccc-HH
Confidence 666654433221 0 111333334455555555555542 479966666554443 33
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
.+..+. .++|++...-|... | ... +...+.++.|.+.
T Consensus 107 ~~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~an---k~~~~~a~~V~~~ 143 (357)
T COG0707 107 GIAAKL-------LGIPVIIHEQNAVP-G--------------------------------LAN---KILSKFAKKVASA 143 (357)
T ss_pred HHHHHh-------CCCCEEEEecCCCc-c--------------------------------hhH---HHhHHhhceeeec
Confidence 333333 47899887766543 1 111 2234567777665
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
-+. .. .+.+ +.++.+.-|.+..+... .. ....+..... +++
T Consensus 144 f~~----~~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~~ 184 (357)
T COG0707 144 FPK----LE----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DKK 184 (357)
T ss_pred ccc----cc----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CCc
Confidence 544 11 1222 22566666666654443 11 1112222111 446
Q ss_pred EEEEEec-CccccCHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 404 VIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 404 ~i~~iGr-l~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
+|+.+|. .+-.+=-+.+.++...+.+ +++++. +|.+. + +.+.+.-.+++ +.....|..+ +..+|+.||++|
T Consensus 185 ~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--~-~~~~~~~~~~~--~~~v~~f~~d-m~~~~~~ADLvI 257 (357)
T COG0707 185 TILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--L-EELKSAYNELG--VVRVLPFIDD-MAALLAAADLVI 257 (357)
T ss_pred EEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--H-HHHHHHHhhcC--cEEEeeHHhh-HHHHHHhccEEE
Confidence 6666655 5555544444455555543 677764 44433 2 23333333333 2334445444 667999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCcCc--------ccccccCcceEEEccccccccCCCCCC--HHHHHHHHHHHHH
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALA 551 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~I~~ll~ 551 (586)
. + +=++++-|..++|+|.|--..+.- +..+.+...|.++ +..+ ++.+.+.|.++++
T Consensus 258 s--R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 258 S--R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLS 323 (357)
T ss_pred e--C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhc
Confidence 3 3 456999999999999988765433 3344555666666 5555 9999999999999
Q ss_pred hcCHHHHHHHHHHHH
Q 007873 552 TYGTQALAEMMKNGM 566 (586)
Q Consensus 552 ~~~~~~~~~~~~~~~ 566 (586)
+ ++.+++|.+++.
T Consensus 324 ~--~~~l~~m~~~a~ 336 (357)
T COG0707 324 N--PEKLKAMAENAK 336 (357)
T ss_pred C--HHHHHHHHHHHH
Confidence 8 889999988874
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-08 Score=112.05 Aligned_cols=299 Identities=18% Similarity=0.210 Sum_probs=192.0
Q ss_pred CCEEEEecCCccchHHHHHH-hhccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccC-----C----Chhh
Q 007873 228 EDVVFVANDWHTSLIPCYLK-TMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----L----PAQF 288 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~-~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~-----l----~~~~ 288 (586)
..++||.||-|++++..-+- ......|+ ....-++||-|.+.+.+ .|+.+.+..+- + ..++
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~f 392 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF 392 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHH
Confidence 34599999999877554433 22211111 23567899999886644 45555443321 0 0111
Q ss_pred cccc--cccc-----CCCCCcC---CcchhhhhHHhhcCCEEEEeCHHHHHHHhcCc---cCCCcchhhhhccCeeEecC
Q 007873 289 KSSF--DFID-----GYNKPVR---GRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVN 355 (586)
Q Consensus 289 ~~~~--~~~~-----~~~~~~~---~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~n 355 (586)
...+ .|.. +....+. ...+++...++..|..|..||.-..+.+.+.. .+.+- +.++.-|.|
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~------P~kf~niTN 466 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIF------PGRFCNVTN 466 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhC------CCcccccCC
Confidence 1110 0000 0000000 11345556677788889899987765543211 01111 236777999
Q ss_pred CcccCCcC----CCCcc----cccc--------------ccCccc----cccccHHHHHH----HHHHhCCCCCCCCcEE
Q 007873 356 GMDVQEWN----PLTDK----YIGV--------------KYDAST----VMDAKPLLKEA----LQAEVGLPVDRNIPVI 405 (586)
Q Consensus 356 gvd~~~~~----p~~~~----~~~~--------------~~~~~~----~~~~~~~~~~~----l~~~~gl~~~~~~~~i 405 (586)
|+.+..|- |.-.+ +|.- -.++++ +.+.+..+|.. ++++.|...+++...+
T Consensus 467 GV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd 546 (815)
T PRK14986 467 GVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFD 546 (815)
T ss_pred CCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCccccee
Confidence 99998885 32111 1110 011222 22334444444 4557798888899999
Q ss_pred EEEecCccccCHHH-HHHHHhhc---cc-C-----CeEEEEEeCCC------hhhHHHHHHHHH------HCCC--ceEE
Q 007873 406 GFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEI------LYPE--KARG 461 (586)
Q Consensus 406 ~~iGrl~~~KG~d~-Ll~A~~~l---~~-~-----~v~lvIvG~g~------~~~~~~l~~l~~------~~~~--~v~~ 461 (586)
+++-|+.++|...+ ++..+..+ .+ + ++++++.|+.. +...+.+.+++. ...+ ++.+
T Consensus 547 ~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVF 626 (815)
T PRK14986 547 VQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVF 626 (815)
T ss_pred eeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEE
Confidence 99999999999999 66665444 33 2 68999999854 345556666665 3344 7889
Q ss_pred EeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEcccccccc
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCE 532 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~~ 532 (586)
...++...+..++.+||+....|+ .|.+|..-+-+|..|.+-+++-.|...|+.++ +.|||+||....++.
T Consensus 627 lenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~ 701 (815)
T PRK14986 627 IPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVE 701 (815)
T ss_pred eCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHH
Confidence 999999999999999999999988 59999999999999999999999999999987 899999986555533
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.4e-08 Score=110.61 Aligned_cols=296 Identities=16% Similarity=0.186 Sum_probs=188.4
Q ss_pred CCCEEEEecCCccchHHHH-HHhhccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccCCChhhc----ccc
Q 007873 227 GEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK----SSF 292 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~-l~~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~~~~----~~~ 292 (586)
.+. +||.||-|++++..- ++......|+ ....-++||.|.+.+.+ .|+...+..+ +|.-+. ..-
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~-Lpr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSL-LPRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHH-hHHHHHHHHHHHH
Confidence 466 999999988775443 3322211111 23557899999886644 4555444322 111110 000
Q ss_pred ccc----cCCCC---------CcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCcc---CCCcchhhhhccCeeEecCC
Q 007873 293 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED---KGVELDNIIRKTGIKGIVNG 356 (586)
Q Consensus 293 ~~~----~~~~~---------~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~---~g~~~~~~~~~~~i~vI~ng 356 (586)
.|. ..+.. .+....+++-..++..|..|..||.-..+.+.+... +.+- +.++.-+.||
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~------p~kf~nvTNG 453 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLW------PNKFHNVTNG 453 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhC------CCccCCcCCC
Confidence 010 00000 000112444455666777788888766554443111 1111 3477889999
Q ss_pred cccCCcC----CCCc----cccc-------------cccC-cccc----ccccHHHHHH----HHHHhCCCCCCCCcEEE
Q 007873 357 MDVQEWN----PLTD----KYIG-------------VKYD-ASTV----MDAKPLLKEA----LQAEVGLPVDRNIPVIG 406 (586)
Q Consensus 357 vd~~~~~----p~~~----~~~~-------------~~~~-~~~~----~~~~~~~~~~----l~~~~gl~~~~~~~~i~ 406 (586)
|.+..|- |.-. ++|. .+|. ++.. .+.+..+|.. ++++.|...+++...++
T Consensus 454 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 533 (798)
T PRK14985 454 ITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDV 533 (798)
T ss_pred cCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchh
Confidence 9999884 3211 1111 1122 2231 2334444444 45777888888889999
Q ss_pred EEecCccccCHHH-HHHHHhhccc----C-----CeEEEEEeCCC------hhhHHHHHHHHHHC------CC--ceEEE
Q 007873 407 FIGRLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGK------KPMEKQLEQLEILY------PE--KARGV 462 (586)
Q Consensus 407 ~iGrl~~~KG~d~-Ll~A~~~l~~----~-----~v~lvIvG~g~------~~~~~~l~~l~~~~------~~--~v~~~ 462 (586)
++-|+.++|...+ ++..+..+.+ + ++++++.|+.. +...+.+..++... .+ +|.+.
T Consensus 534 q~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 613 (798)
T PRK14985 534 QIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFL 613 (798)
T ss_pred hHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEe
Confidence 9999999999999 6666544432 2 58899999854 34455555665433 23 68888
Q ss_pred eccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEcccccc
Q 007873 463 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVD 530 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~ 530 (586)
..++...+..++.+||+....|+ .|.+|..-+-+|..|.+-++|-.|...|+.++ +.|||+||....+
T Consensus 614 enY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~e 685 (798)
T PRK14985 614 PDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQ 685 (798)
T ss_pred CCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHH
Confidence 89999999999999999999887 59999999999999999999999999999986 7899999865554
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.3e-07 Score=104.63 Aligned_cols=292 Identities=19% Similarity=0.224 Sum_probs=192.2
Q ss_pred CCCEEEEecCCccchHHHH-HHhhccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccCCChhhc-------
Q 007873 227 GEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK------- 289 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~-l~~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~~~~------- 289 (586)
.+. +||.||-|++++..- ++......|+ .....++||.|.+.+.+ .|+.+.+..+ +|.-+.
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHH
Confidence 456 999999888765433 3322211111 23557899999886544 4554444322 111110
Q ss_pred -----------------cccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCc---cCCCcchhhhhccC
Q 007873 290 -----------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTG 349 (586)
Q Consensus 290 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~---~~g~~~~~~~~~~~ 349 (586)
..+.-++.. ....+++-..++..|..|..||.-..+.+.+.. .+.+= +.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~------P~k 447 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELY------PEK 447 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhC------CCc
Confidence 000001110 012355556678889999999987776665420 01111 237
Q ss_pred eeEecCCcccCCcC----CCCcc----ccc-------------cccC-c----cccccccHHHHHH----HHHHhCCCCC
Q 007873 350 IKGIVNGMDVQEWN----PLTDK----YIG-------------VKYD-A----STVMDAKPLLKEA----LQAEVGLPVD 399 (586)
Q Consensus 350 i~vI~ngvd~~~~~----p~~~~----~~~-------------~~~~-~----~~~~~~~~~~~~~----l~~~~gl~~~ 399 (586)
+.-+.||+.+..|- |.-.+ .|. .+|- + ..+.+.+..+|.. +++..|+..+
T Consensus 448 f~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ld 527 (797)
T cd04300 448 FNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVD 527 (797)
T ss_pred cCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 78899999998885 22111 111 0111 2 1223444445554 4667898888
Q ss_pred CCCcEEEEEecCccccCHHH-HHHHHh---hccc-C-----CeEEEEEeCCC------hhhHHHHHHHHHH------CCC
Q 007873 400 RNIPVIGFIGRLEEQKGSDI-LAAAIP---HFIK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE 457 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~KG~d~-Ll~A~~---~l~~-~-----~v~lvIvG~g~------~~~~~~l~~l~~~------~~~ 457 (586)
++...++++-|+.++|...+ ++..+. ++.+ + ++++++.|+.. +...+.+..++.. ..+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 99999999999999999999 655544 4433 2 58899999854 3445556566553 333
Q ss_pred --ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEcccccc
Q 007873 458 --KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVD 530 (586)
Q Consensus 458 --~v~~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~ 530 (586)
+|.+...++...+..++.+||+....|+ .|.+|..-+-+|.-|.+.++|-.|...|+.++ ++|+|+||....+
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~e 686 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEE 686 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHH
Confidence 6888889999999999999999999887 59999999999999999999999999999987 8899999865544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.6e-09 Score=105.78 Aligned_cols=315 Identities=18% Similarity=0.252 Sum_probs=177.1
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccC-cccccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA-FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+-||-|.|+|..+...++.+... ..+-+|||.|..-. ||+- .+..+..+-.+.|- .+-..|..+ ....
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd~f~--vD~EAGkr~--IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLDSFD--VDKEAGKRQ--IYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchhhcc--cchhhccch--hHHH
Confidence 45678899999876444433321 47788999996532 3211 11111111111110 001111111 1112
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
+-+++.+...|+...|||+-.+-+.. -+++.++-.+.|||.++..|.....- ..-.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HEF-----------QNLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHEF-----------QNLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHHH-----------HHHHHHH
Confidence 34556777778888999997765543 23444566778999999888654210 0112233
Q ss_pred HHHHHHHh-----C-CCCC-CCCcEEEEEecCc-cccCHHHHHHHHhhccc------CC---eEEEEEeCCCh-------
Q 007873 387 KEALQAEV-----G-LPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTGKK------- 442 (586)
Q Consensus 387 ~~~l~~~~-----g-l~~~-~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~------~~---v~lvIvG~g~~------- 442 (586)
|+.+++-+ | +.-| ++...+...||.+ ..||-|++||++++|.. .+ +.|+|.-....
T Consensus 302 KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesL 381 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESL 381 (692)
T ss_pred HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhh
Confidence 44443321 1 1111 1334566779988 59999999999998843 12 33444432100
Q ss_pred ---hhHHHHHHHH----H----------------------------------------HCC-------------------
Q 007873 443 ---PMEKQLEQLE----I----------------------------------------LYP------------------- 456 (586)
Q Consensus 443 ---~~~~~l~~l~----~----------------------------------------~~~------------------- 456 (586)
...++|.+.. + .+|
T Consensus 382 kgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~i 461 (692)
T KOG3742|consen 382 KGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSI 461 (692)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHh
Confidence 0000000000 0 000
Q ss_pred ------------CceEEEeccC---hH----HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCc----cc
Q 007873 457 ------------EKARGVAKFN---IP----LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VD 513 (586)
Q Consensus 457 ------------~~v~~~~~~~---~~----~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e 513 (586)
-++.++..|. .+ +..++..+|.+.|+||++||+|.+..|.-.+|+|-|+|+..|+ .|
T Consensus 462 Rr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMee 541 (692)
T KOG3742|consen 462 RRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEE 541 (692)
T ss_pred HhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHH
Confidence 1233444341 11 2335889999999999999999999999999999999998884 44
Q ss_pred ccccC-cceEEEccccccccCCCC-CCHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHhcCCHHHHHHHHHH
Q 007873 514 TVEEG-FTGFQMGSFSVDCEAVDP-VDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 514 ~v~~g-~~G~~~~~~~~~~~~v~~-~d~~~la~~I~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~ 581 (586)
.|.+. ..|+-+ +|-..-.| +.+++|++.+.+.... ..++++.++- +..-++|+.+...|.+
T Consensus 542 hi~d~~ayGIYI----vDRRfks~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 542 HIEDPQAYGIYI----VDRRFKSPDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred HhcCchhceEEE----EecccCChhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 55442 334432 33333333 3478888888887764 3444554443 3566899999888765
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.3e-08 Score=90.28 Aligned_cols=181 Identities=19% Similarity=0.267 Sum_probs=110.6
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEE
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (586)
||++|++--.| ...||.++++.+|+..|+++||+|+|.|.... +... ....+|++.+
T Consensus 3 kIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~-~~~~---------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDY-YPYK---------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCC-CCCC---------------------CcccCCeEEE
Confidence 79999988677 37999999999999999999999999998622 1110 1123578888
Q ss_pred EEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCc-cchHHH
Q 007873 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPC 244 (586)
Q Consensus 166 ~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~-~~~~~~ 244 (586)
.++.|..-. ..-+.....+++.+++.... .+.+.| |++.+... .+++..
T Consensus 60 ~i~~~~~g~----------------------~~si~yd~~sl~~al~~~~~-------~~~~~~-ii~ilg~~~g~~~~~ 109 (185)
T PF09314_consen 60 YIPAPKNGS----------------------AESIIYDFLSLLHALRFIKQ-------DKIKYD-IILILGYGIGPFFLP 109 (185)
T ss_pred EeCCCCCCc----------------------hHHHHHHHHHHHHHHHHHhh-------ccccCC-EEEEEcCCccHHHHH
Confidence 776552210 01111122233333321110 012478 77776655 344444
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchh-hhhHHhhcCCEEEEe
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILESDMVLTV 323 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ad~vitv 323 (586)
+++.+.+ .+.|+++.+|++++. |- +|.. + .+..++ -++.+.+.||.+|+.
T Consensus 110 ~~r~~~~-----~g~~v~vN~DGlEWk-R~------------KW~~----------~-~k~~lk~~E~~avk~ad~lIaD 160 (185)
T PF09314_consen 110 FLRKLRK-----KGGKVVVNMDGLEWK-RA------------KWGR----------P-AKKYLKFSEKLAVKYADRLIAD 160 (185)
T ss_pred HHHhhhh-----cCCcEEECCCcchhh-hh------------hcCH----------H-HHHHHHHHHHHHHHhCCEEEEc
Confidence 4443321 367999999987751 10 0100 0 001112 225567899999999
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 358 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd 358 (586)
|+...+.+.+. |+ ..+.++|++|.|
T Consensus 161 s~~I~~y~~~~--y~--------~~~s~~IaYGad 185 (185)
T PF09314_consen 161 SKGIQDYIKER--YG--------RKKSTFIAYGAD 185 (185)
T ss_pred CHHHHHHHHHH--cC--------CCCcEEecCCCC
Confidence 99999999963 44 127899999986
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.8e-07 Score=103.62 Aligned_cols=298 Identities=20% Similarity=0.224 Sum_probs=192.4
Q ss_pred CCCEEEEecCCccchHHHH-HHhhccCCCC-------CCCceEEEEEcCCcccc--ccCccccccc---------CCChh
Q 007873 227 GEDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 287 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~-l~~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~---------~l~~~ 287 (586)
.+. +||.||-|++++..- ++......|+ ....-++||-|.+.+.+ .|+.+.+..+ ++..+
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 456 999999888775443 3322211111 23557899999886544 4555444321 11111
Q ss_pred hccccc--cccCCC-----CCc---CCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCc---cCCCcchhhhhccCeeEec
Q 007873 288 FKSSFD--FIDGYN-----KPV---RGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 354 (586)
Q Consensus 288 ~~~~~~--~~~~~~-----~~~---~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~ 354 (586)
|..... +....+ ..+ ....+++-..++..|..|..||+-..+.+.... .+.+= +.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCccCCcC
Confidence 111000 000000 000 012355556677788999999987776655310 01111 23778899
Q ss_pred CCcccCCcC----CCCc----cccc-------------ccc-Cc----cccccccHHHHHHH----HHHhCCCCCCCCcE
Q 007873 355 NGMDVQEWN----PLTD----KYIG-------------VKY-DA----STVMDAKPLLKEAL----QAEVGLPVDRNIPV 404 (586)
Q Consensus 355 ngvd~~~~~----p~~~----~~~~-------------~~~-~~----~~~~~~~~~~~~~l----~~~~gl~~~~~~~~ 404 (586)
||+.+..|- |.-. ++|. .+| ++ ..+.+.|..+|..| +++.|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 999998885 2111 1111 112 22 22233444455544 56778888888899
Q ss_pred EEEEecCccccCHHH-HHHHHhh---ccc-C-----CeEEEEEeCCC------hhhHHHHHHHHHH------CCC--ceE
Q 007873 405 IGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KAR 460 (586)
Q Consensus 405 i~~iGrl~~~KG~d~-Ll~A~~~---l~~-~-----~v~lvIvG~g~------~~~~~~l~~l~~~------~~~--~v~ 460 (586)
++++-|+.++|...+ ++..+.. +.+ + +.++++.|+.. +...+.+.+++.. ..+ +|.
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999999 6665544 433 2 67899999854 3445555555543 233 688
Q ss_pred EEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEccccccc
Q 007873 461 GVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDC 531 (586)
Q Consensus 461 ~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~ 531 (586)
+...++...+..++.+||+....|+ .|.+|..-+-+|..|.+.++|-.|...|+.++ ++|+|+||....++
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev 684 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEV 684 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHH
Confidence 8999999999999999999999887 59999999999999999999999999999987 88999998655543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.6e-06 Score=89.81 Aligned_cols=119 Identities=19% Similarity=0.260 Sum_probs=83.7
Q ss_pred CCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
...+++++|..+.. .++++++.+ ++.+++++|.... .....++. ...|+.+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~----------~~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAA----------DPRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCcc----------cccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44689999988777 667888876 5788888876631 11134565 4466667778899999999
Q ss_pred EEcCCCCCCcHH-HHHHHHcCCcEEEcCCcCccc------ccccCcceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 481 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 481 l~PS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
|. ..|.. +.||+++|+|+|+-...+..| .+++.+.|..+ ..+.-+++.|++.|+++
T Consensus 255 Is-----~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 IS-----KGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EE-----CCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 94 35666 999999999999998766444 33444555553 11344678888887754
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-06 Score=97.35 Aligned_cols=288 Identities=19% Similarity=0.245 Sum_probs=164.6
Q ss_pred EEEEecCCccchHHHH-HHhhccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccCCCh----------hhc
Q 007873 230 VVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 289 (586)
Q Consensus 230 vii~~h~~~~~~~~~~-l~~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~----------~~~ 289 (586)
++||.||-|++++..- ++......|+ ....-.+||.|.+-+.+ +|+.+.+..+ ||. +|.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 4999999988875444 3333322332 12446799999987655 4554444321 111 111
Q ss_pred cc--------------cccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecC
Q 007873 290 SS--------------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 355 (586)
Q Consensus 290 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~n 355 (586)
.. +...+.. ....+++...++..|..+..||.-..+.+.+....... . +-+.++.-+.|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~----~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~--~-l~P~kf~nvTN 367 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEG----NSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFY--E-LWPEKFGNVTN 367 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETS----SSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHH--H-HSGGGEEE---
T ss_pred HHHHHHhcCcchhhhhccccccc----chhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhh--h-cCCceeecccc
Confidence 10 0001000 11345666778889999999999887765542111110 1 12347999999
Q ss_pred CcccCCcCCCC--------cccccccc--Ccccc----------------ccccHHHH----HHHHHHhCCCCCCCCcEE
Q 007873 356 GMDVQEWNPLT--------DKYIGVKY--DASTV----------------MDAKPLLK----EALQAEVGLPVDRNIPVI 405 (586)
Q Consensus 356 gvd~~~~~p~~--------~~~~~~~~--~~~~~----------------~~~~~~~~----~~l~~~~gl~~~~~~~~i 405 (586)
||.+..|-... +++|.-.+ +++.+ .+.+..+| +.++++.|...+++...+
T Consensus 368 GVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfd 447 (713)
T PF00343_consen 368 GVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFD 447 (713)
T ss_dssp -B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEE
T ss_pred CccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhh
Confidence 99999984321 11222111 11111 01112223 334667787777888899
Q ss_pred EEEecCccccCHHHH-H---HHHhhccc------CCeEEEEEeCCCh------hhHHHHHHHHHH------CCC--ceEE
Q 007873 406 GFIGRLEEQKGSDIL-A---AAIPHFIK------ENVQIIVLGTGKK------PMEKQLEQLEIL------YPE--KARG 461 (586)
Q Consensus 406 ~~iGrl~~~KG~d~L-l---~A~~~l~~------~~v~lvIvG~g~~------~~~~~l~~l~~~------~~~--~v~~ 461 (586)
+++-|+.++|...+. + +-+.++++ .+++|+|.|+..+ ...+.+.+++.. ..+ +|.+
T Consensus 448 v~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvF 527 (713)
T PF00343_consen 448 VQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVF 527 (713)
T ss_dssp EEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEE
T ss_pred hhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEe
Confidence 999999999999883 3 44444443 3689999998542 344455555432 223 6889
Q ss_pred EeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEc
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 525 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 525 (586)
...++...+..++.+||+.+..|+ .|.+|..-+-+|..|.+-+++-.|...|+.++ ..+.|+||
T Consensus 528 lenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 528 LENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp ETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred ecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 999999999999999999999987 59999999999999999999999999999864 46899997
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.70 E-value=3e-06 Score=89.78 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=129.7
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecC-CcccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~n-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
+-|+..++.++..++.+.+ .|++.+ +|.++-| ++|.-.+.... .+..+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHH
Confidence 4578899999999998886 566543 6766654 45543322111 14567778
Q ss_pred hCCCCCCCCcEEEEEecCc--c---ccCHHHHHHHHhhcccCCeEEEEE-e-CCChhhHHHHHHHHHHCCCceEEEeccC
Q 007873 394 VGLPVDRNIPVIGFIGRLE--E---QKGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 466 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~--~---~KG~d~Ll~A~~~l~~~~v~lvIv-G-~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (586)
+|++.+. ..+++.+-+-. . .+.+..+++++..+. .++.++.- + .+.+...+.++++... ..++.......
T Consensus 195 lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 8885322 24344444432 2 334556666665552 34533321 2 2223344555555322 23587777778
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
-.+...+++.||++|--| .|.. .||.++|+|+|+ .+.-+|.+..|.+.+++ +.|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 888889999999999322 2333 899999999994 45688888888888864 56899999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 007873 547 RRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
.++++ +..+..+.. ....|-....++++.+
T Consensus 334 ~~~~~---~~~~~~~~~--~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 334 EKLLD---PAFKKSLKN--VKNPYGDGNSSERIIE 363 (365)
T ss_pred HHHhC---hHHHHHHhh--CCCCCCCChHHHHHHH
Confidence 99543 332222211 1234655556666554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.3e-06 Score=85.59 Aligned_cols=294 Identities=17% Similarity=0.189 Sum_probs=162.3
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++=-.. +| ...+...+...|.++||+|.|.+..++...+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 33 3568888999999999999999988765433211 114444
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
..+.. .|..+++ +.........++.+... +++|| ++.++....+.-.+
T Consensus 52 ~~iG~----------~g~~~~~------------Kl~~~~~R~~~l~~~~~---------~~~pD-v~is~~s~~a~~va 99 (335)
T PF04007_consen 52 IVIGK----------HGDSLYG------------KLLESIERQYKLLKLIK---------KFKPD-VAISFGSPEAARVA 99 (335)
T ss_pred EEEcC----------CCCCHHH------------HHHHHHHHHHHHHHHHH---------hhCCC-EEEecCcHHHHHHH
Confidence 43321 1112221 12122233333333332 24799 55554322222111
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
++ .++|.|....+-.. . .-.+-.+..||.++++.
T Consensus 100 ~~----------lgiP~I~f~D~e~a-~-----------------------------------~~~~Lt~Pla~~i~~P~ 133 (335)
T PF04007_consen 100 FG----------LGIPSIVFNDTEHA-I-----------------------------------AQNRLTLPLADVIITPE 133 (335)
T ss_pred HH----------hCCCeEEEecCchh-h-----------------------------------ccceeehhcCCeeECCc
Confidence 11 38899988774211 0 00111245689998877
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEe-cCCcccCC----cCCCCccccccccCccccccccHHHHHHHHHHhCCCCC
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 399 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~ngvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 399 (586)
-.-...+.. +|.. + .+. +||++... |.|. ..+.+++|+..
T Consensus 134 ~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~Pd----------------------~~vl~~lg~~~- 178 (335)
T PF04007_consen 134 AIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKPD----------------------PEVLKELGLDD- 178 (335)
T ss_pred ccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCCC----------------------hhHHHHcCCCC-
Confidence 654444443 4433 1 233 67776433 4443 45688899652
Q ss_pred CCCcEEEEEecCccccC------HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChH--HHH
Q 007873 400 RNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP--LAH 471 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~KG------~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~--~~~ 471 (586)
.+.|+. |.++.+- -+.+-+.++.|.+..-.+|++-...+ + .++.++++ + ....+ ..+
T Consensus 179 --~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~--~---~~~~~~~~--~----~i~~~~vd~~ 243 (335)
T PF04007_consen 179 --EPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED--Q---RELFEKYG--V----IIPPEPVDGL 243 (335)
T ss_pred --CCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc--h---hhHHhccC--c----cccCCCCCHH
Confidence 245542 5544332 23345566666553222666654331 1 12223332 1 11111 234
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc---CcccccccCcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 472 ~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
.++..||++| -+-|.-..||...|+|.|.+..| +..+.+.+ .|+++ ...|++++.+.+.+
T Consensus 244 ~Ll~~a~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 244 DLLYYADLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRK 306 (335)
T ss_pred HHHHhcCEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHH
Confidence 7999999999 35678899999999999997654 23344444 47776 78999999997776
Q ss_pred HHHh
Q 007873 549 ALAT 552 (586)
Q Consensus 549 ll~~ 552 (586)
.+..
T Consensus 307 ~~~~ 310 (335)
T PF04007_consen 307 NLGK 310 (335)
T ss_pred hhhc
Confidence 6654
|
They are found in archaea and some bacteria and have no known function. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-06 Score=86.39 Aligned_cols=297 Identities=14% Similarity=0.097 Sum_probs=169.2
Q ss_pred CcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH--HHHHhhccCCCCCCCceEEEEEcCCcc
Q 007873 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP--CYLKTMYKPKGMYKSAKVVFCIHNIAY 270 (586)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~--~~l~~~~~~~~~~~~~pvv~~iH~~~~ 270 (586)
|.+-..+...+.+...++.+.+-.+ +|| ++.+-|.+..-+. ..+++.. +++|+|+.+-...+
T Consensus 60 f~EVL~~lp~llk~~~~~~~~i~~~---------kpD-~~i~IDsPdFnl~vak~lrk~~------p~i~iihYV~PsVW 123 (381)
T COG0763 60 FVEVLGRLPRLLKIRRELVRYILAN---------KPD-VLILIDSPDFNLRVAKKLRKAG------PKIKIIHYVSPSVW 123 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---------CCC-EEEEeCCCCCchHHHHHHHHhC------CCCCeEEEECccee
Confidence 4555555555666666666654322 699 5555565544443 3344432 56888876652111
Q ss_pred ccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCe
Q 007873 271 QGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 350 (586)
Q Consensus 271 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i 350 (586)
-++-+......+..|+++++=|.-.+.+.+ .|++ .
T Consensus 124 ---------------------------------AWr~~Ra~~i~~~~D~lLailPFE~~~y~k---~g~~---------~ 158 (381)
T COG0763 124 ---------------------------------AWRPKRAVKIAKYVDHLLAILPFEPAFYDK---FGLP---------C 158 (381)
T ss_pred ---------------------------------eechhhHHHHHHHhhHeeeecCCCHHHHHh---cCCC---------e
Confidence 111233445567899999999988888886 4443 4
Q ss_pred eEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEec-Ccc-ccCHHHHHHHHhhc
Q 007873 351 KGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHF 427 (586)
Q Consensus 351 ~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGr-l~~-~KG~d~Ll~A~~~l 427 (586)
+.|=|.+ |.-.+.+ +++..++++|++.+. ..+.+..|. -++ .+-...+.+|++++
T Consensus 159 ~yVGHpl~d~i~~~~---------------------~r~~ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l 216 (381)
T COG0763 159 TYVGHPLADEIPLLP---------------------DREAAREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQEL 216 (381)
T ss_pred EEeCChhhhhccccc---------------------cHHHHHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 4444443 2211222 266789999998654 344555554 444 45577889999999
Q ss_pred cc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEE
Q 007873 428 IK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV 505 (586)
Q Consensus 428 ~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~ 505 (586)
.. ++.+|++--.... ++....+. .+.+. ........+...++.+..||+.+. .+|.+.||+|.+|+|.|+
T Consensus 217 ~~~~~~~~~vlp~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~a~~~aD~al~-----aSGT~tLE~aL~g~P~Vv 288 (381)
T COG0763 217 KARYPDLKFVLPLVNAK-YRRIIEEA-LKWEV-AGLSLILIDGEKRKAFAAADAALA-----ASGTATLEAALAGTPMVV 288 (381)
T ss_pred HhhCCCceEEEecCcHH-HHHHHHHH-hhccc-cCceEEecCchHHHHHHHhhHHHH-----hccHHHHHHHHhCCCEEE
Confidence 75 7999998665442 23333222 22221 112334456677789999999885 579999999999999998
Q ss_pred cC-CcCccccccc-----Cc---ceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH------HHhcC
Q 007873 506 AS-TGGLVDTVEE-----GF---TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG------MAQDL 570 (586)
Q Consensus 506 s~-~gg~~e~v~~-----g~---~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~------~~~~f 570 (586)
+- +..+.-.+.. .. --++.|.+.++==.-+.-.++.+++++..++.+ ...++++.+.. +..+.
T Consensus 289 ~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~--~~~~~~~~~~~~~l~~~l~~~~ 366 (381)
T COG0763 289 AYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN--GDRREALKEKFRELHQYLREDP 366 (381)
T ss_pred EEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC--hHhHHHHHHHHHHHHHHHcCCc
Confidence 74 3332221110 00 001111111110001334689999999999998 43444443333 22333
Q ss_pred CHHHHHHHHHHH
Q 007873 571 SWKVSIGTVQEE 582 (586)
Q Consensus 571 sw~~~a~~~~~~ 582 (586)
.-+..++..++.
T Consensus 367 ~~e~aA~~vl~~ 378 (381)
T COG0763 367 ASEIAAQAVLEL 378 (381)
T ss_pred HHHHHHHHHHHH
Confidence 455555555443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.1e-05 Score=79.00 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=71.7
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEE-EEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~l-vIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
.+++++|..+..+....+++++.++. .++++ +|+|.+.+ ..+.+++.....+ ++.. .-..+.+.++|+.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~--~~~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIIL--FIDVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEE--EeCHHHHHHHHHHCCEEE
Confidence 57899999998887888999998763 34443 37787654 3456677665544 4542 234566778999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCC
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVAST 508 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~ 508 (586)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 77999999999999998764
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.4e-05 Score=80.58 Aligned_cols=207 Identities=15% Similarity=0.035 Sum_probs=121.6
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
-+.|+.|++..+...+.+.+ .|+ ++.++=|.+-.... +.. +
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~-~~~--------------------~------ 198 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLE-PPE--------------------R------ 198 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCc-ccc--------------------c------
Confidence 35799999999988888874 333 45566565422211 100 0
Q ss_pred hCCCCCCCCcEEEEEecC--ccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCc------------
Q 007873 394 VGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEK------------ 458 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl--~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~------------ 458 (586)
.+++.+. ..++++.|.- +-.+++..+++++..+.+ ++++|++.-.+.. ..+.+++...+.+..
T Consensus 199 ~~l~~~~-~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 199 KPLLTGR-FRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL-SLEKLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred cccCCCC-CEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC-CHHHHHHHHHhcCceecCCccccchhh
Confidence 0333221 2344555554 235678899999999965 5888876432222 123333333322211
Q ss_pred ----eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcc---cccccC----cceEEEccc
Q 007873 459 ----ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEEG----FTGFQMGSF 527 (586)
Q Consensus 459 ----v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~g----~~G~~~~~~ 527 (586)
+... .+ ......+++.||++|.. .|.+..|++++|+|+|.....+-. .+.+.. ..++.
T Consensus 277 ~~~~~~v~-~~-~~~~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~---- 345 (396)
T TIGR03492 277 QKGTLEVL-LG-RGAFAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF---- 345 (396)
T ss_pred ccCceEEE-ec-hHhHHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe----
Confidence 2211 22 23467899999999976 567779999999999998743321 112220 12222
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHH
Q 007873 528 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQ 580 (586)
Q Consensus 528 ~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~ 580 (586)
+...|++.+++.+.+++++ ++.+++|.++.. .+...-+.+++.+.
T Consensus 346 ------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 346 ------LASKNPEQAAQVVRQLLAD--PELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred ------cCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 2567889999999999998 777777764332 23344555555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.8e-05 Score=81.57 Aligned_cols=123 Identities=20% Similarity=0.183 Sum_probs=81.4
Q ss_pred CcEEEEEecCcc---ccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 402 IPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 402 ~~~i~~iGrl~~---~KG~d~Ll~A~~~l~~~~v~lv-IvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
.++++..|.... .+-...+++|+..+ +.+++ .+|..... . ...++++......+. ..++..|
T Consensus 240 ~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~~ 305 (401)
T cd03784 240 PPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPRC 305 (401)
T ss_pred CcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhhh
Confidence 467778888753 44556667777665 45544 45544311 1 234456665544432 3578999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHH
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 551 (586)
|++|. -+-..++.||+++|+|+|+....+ ..+.+.+...|... +.. +++++++++.++++
T Consensus 306 d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 306 AAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLLD 371 (401)
T ss_pred heeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHhC
Confidence 99993 333488999999999999997654 34455555567654 443 78999999999998
Q ss_pred h
Q 007873 552 T 552 (586)
Q Consensus 552 ~ 552 (586)
+
T Consensus 372 ~ 372 (401)
T cd03784 372 P 372 (401)
T ss_pred H
Confidence 5
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.8e-06 Score=75.14 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=28.3
Q ss_pred eEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecC
Q 007873 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (586)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~ 128 (586)
|||+++.... .++.+++.+|.++||+|.++++..
T Consensus 1 KIl~i~~~~~---------~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTPS---------TFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCcH---------HHHHHHHHHHHHCCCEEEEEEcCC
Confidence 6889987632 367899999999999999999963
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.3e-05 Score=80.32 Aligned_cols=251 Identities=14% Similarity=0.132 Sum_probs=137.7
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+||+|++.=|-.+++.++..... .++| |.++|.-...+... .+.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~HieaGlRs~d~~------~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEAGLRSGDRT------EGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES-----S-TT------SSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecCCCCccccC------CCCch--------------------
Confidence 59976666677777766665554 4899 55566421100000 01222
Q ss_pred hhhhhHHh-hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcCCCCccccccccCccccccccH
Q 007873 307 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (586)
Q Consensus 307 ~~~~~~~~-~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (586)
...|..+ +-|+..++.++..++.+.+ .|++.+ +|.++=|- +|.-......
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~~~~------------------ 164 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQNKEE------------------ 164 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHHHHT------------------
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHhHHH------------------
Confidence 2233333 4699999999999999997 688766 77777553 3322111000
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEecCcc---ccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCce
Q 007873 385 LLKEAL-QAEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 459 (586)
Q Consensus 385 ~~~~~l-~~~~gl~~~~~~~~i~~iGrl~~---~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v 459 (586)
..+.+ ....... .++..+++..-|.+. ......+.+++..+.+ +++++++.....+.....+.+...++ .++
T Consensus 165 -~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 165 -IEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp -TCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred -HhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 00000 1111001 123344555544432 3446677777777766 58999988875555666666666666 378
Q ss_pred EEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccCcceEEEccccccccCCCCCC
Q 007873 460 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (586)
Q Consensus 460 ~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d 538 (586)
.............+++.|+++|- ..|.++-||..+|+|+|.-. .|--.+.+..+.+-+ + +.|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvg-----dSsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVG-----DSSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEE-----SSHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEE-----cCccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 88878788888889999999983 45644449999999999995 455566666555444 5 389
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHH
Q 007873 539 VAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 539 ~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
++++.++|.+++++ ...+..+
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~ 325 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKL 325 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhh
Confidence 99999999999986 4444444
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00025 Score=78.22 Aligned_cols=225 Identities=14% Similarity=0.122 Sum_probs=128.4
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
..+..-+..|.+++.=|...+.+.+ .|+ +++.+=|.+ |. ..+.. ++
T Consensus 354 Rikki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~ 400 (608)
T PRK01021 354 RKTILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PN 400 (608)
T ss_pred hHHHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CH
Confidence 3445556789999999988888775 455 345555543 22 11111 14
Q ss_pred HHHHHHhCCCCCCCCcEEEEEe-cCcc-ccCHHHHHHHHh--hcccCCeEEEEEeCCChhhHHHHHHHHHHCCC-ceEEE
Q 007873 388 EALQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV 462 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iG-rl~~-~KG~d~Ll~A~~--~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~-~v~~~ 462 (586)
+++++++|++.+. ..+-+..| |-.| .+....+++|+. .+. ++.++++..... ..++.+++.....+. .+.
T Consensus 401 ~~~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~-- 475 (608)
T PRK01021 401 LSWKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSANP-KYDHLILEVLQQEGCLHSH-- 475 (608)
T ss_pred HHHHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecCch-hhHHHHHHHHhhcCCCCeE--
Confidence 5678889996443 23345555 4545 556788899998 654 468887754332 234555555433220 122
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCccccccc-------Ccce---EEEccccccc
Q 007873 463 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEE-------GFTG---FQMGSFSVDC 531 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~-------g~~G---~~~~~~~~~~ 531 (586)
...+...+++++.||+.+. .+|.+.+|++.+|+|.|+.- .+.+.-.+.. ..-| ++.|...+ .
T Consensus 476 -ii~~~~~~~~m~aaD~aLa-----aSGTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~Vv-P 548 (608)
T PRK01021 476 -IVPSQFRYELMRECDCALA-----KCGTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIF-P 548 (608)
T ss_pred -EecCcchHHHHHhcCeeee-----cCCHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcc-h
Confidence 1122224689999999996 46999999999999998864 3322221110 0000 01111100 2
Q ss_pred cCC---CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH-------HhcCCHHHHHHHHHH
Q 007873 532 EAV---DPVDVAAVSTTVRRALATYGTQALAEMMKNGM-------AQDLSWKVSIGTVQE 581 (586)
Q Consensus 532 ~~v---~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~-------~~~fsw~~~a~~~~~ 581 (586)
+.+ +..+++.+++.+ +++.+ ++.++++.++.. ...-+.++..+.+.+
T Consensus 549 EllqgQ~~~tpe~La~~l-~lL~d--~~~r~~~~~~l~~lr~~Lg~~~~~~~~~~~~~~~ 605 (608)
T PRK01021 549 EFIGGKKDFQPEEVAAAL-DILKT--SQSKEKQKDACRDLYQAMNESASTMKECLSLIFE 605 (608)
T ss_pred hhcCCcccCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHh
Confidence 233 466899999996 88877 555655555542 134455555554443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00015 Score=76.50 Aligned_cols=312 Identities=19% Similarity=0.148 Sum_probs=174.1
Q ss_pred HhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceEEEEcCccccccccCCCCCccc
Q 007873 106 VLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIY 185 (586)
Q Consensus 106 ~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~~~~~y 185 (586)
+..+|.++|.++.-++.++.-..++... .|+..++ +...+ .+-
T Consensus 13 ~ga~Li~~Lk~~~p~~~~~GvGG~~M~~--------------------------~G~~~l~-d~~~l----------svm 55 (373)
T PF02684_consen 13 HGARLIRALKARDPDIEFYGVGGPRMQA--------------------------AGVESLF-DMEEL----------SVM 55 (373)
T ss_pred HHHHHHHHHHhhCCCcEEEEEechHHHh--------------------------CCCceec-chHHh----------hhc
Confidence 6677999999998788877655433222 1333332 11111 111
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH--HHHHhhccCCCCCCCceEEE
Q 007873 186 GPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP--CYLKTMYKPKGMYKSAKVVF 263 (586)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~--~~l~~~~~~~~~~~~~pvv~ 263 (586)
| +.+-..++..+.+...++.+.+..+ +|| +++.=|++..-+. ..+++.. ..+|+++
T Consensus 56 G------~~Evl~~l~~~~~~~~~~~~~~~~~---------~pd-~vIlID~pgFNlrlak~lk~~~------~~~~viy 113 (373)
T PF02684_consen 56 G------FVEVLKKLPKLKRLFRKLVERIKEE---------KPD-VVILIDYPGFNLRLAKKLKKRG------IPIKVIY 113 (373)
T ss_pred c------HHHHHHHHHHHHHHHHHHHHHHHHc---------CCC-EEEEeCCCCccHHHHHHHHHhC------CCceEEE
Confidence 1 5555666666666555555544322 699 5555576654443 3344331 2344777
Q ss_pred EEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchh
Q 007873 264 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 343 (586)
Q Consensus 264 ~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~ 343 (586)
.+-.. - |+ +.-...+..-+..|.++++=|.-.+.+.+ .|+
T Consensus 114 YI~Pq---v-WA-----------------------------Wr~~R~~~i~~~~D~ll~ifPFE~~~y~~---~g~---- 153 (373)
T PF02684_consen 114 YISPQ---V-WA-----------------------------WRPGRAKKIKKYVDHLLVIFPFEPEFYKK---HGV---- 153 (373)
T ss_pred EECCc---e-ee-----------------------------eCccHHHHHHHHHhheeECCcccHHHHhc---cCC----
Confidence 65421 1 10 11133444556789999999988888775 454
Q ss_pred hhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEE-EEEe-cCcccc-CHHHH
Q 007873 344 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI-GFIG-RLEEQK-GSDIL 420 (586)
Q Consensus 344 ~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i-~~iG-rl~~~K-G~d~L 420 (586)
+++.+=|.+= +...+.. .+...++.+ ++.+ .++| +..| |-.+.+ .+..+
T Consensus 154 -----~~~~VGHPl~-d~~~~~~-------------------~~~~~~~~~-l~~~--~~iIaLLPGSR~~EI~rllP~~ 205 (373)
T PF02684_consen 154 -----PVTYVGHPLL-DEVKPEP-------------------DRAEAREKL-LDPD--KPIIALLPGSRKSEIKRLLPIF 205 (373)
T ss_pred -----CeEEECCcch-hhhccCC-------------------CHHHHHHhc-CCCC--CcEEEEeCCCCHHHHHHHHHHH
Confidence 3555555431 1111111 134445555 6543 3544 4454 455544 45889
Q ss_pred HHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHH
Q 007873 421 AAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 498 (586)
Q Consensus 421 l~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma 498 (586)
++++.++.+ +++++++..... ...+.+++.....+.++... .......+.++.||+.+. ..|.+.+|++.
T Consensus 206 l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~m~~ad~al~-----~SGTaTLE~Al 277 (373)
T PF02684_consen 206 LEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIV--IIEGESYDAMAAADAALA-----ASGTATLEAAL 277 (373)
T ss_pred HHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEE--EcCCchHHHHHhCcchhh-----cCCHHHHHHHH
Confidence 999999976 799999876544 24444555555444333222 222345569999999986 46999999999
Q ss_pred cCCcEEEcC-CcCccccc-----ccCcce---EEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 499 YGTVPIVAS-TGGLVDTV-----EEGFTG---FQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 499 ~G~PvI~s~-~gg~~e~v-----~~g~~G---~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
+|+|.|+.- ++.+.-.+ +-..-| ++.|...+.==..+..+++.+++.+.+++.+
T Consensus 278 ~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 278 LGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN 340 (373)
T ss_pred hCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC
Confidence 999998775 33222211 110001 0111111110012456899999999999998
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0005 Score=72.04 Aligned_cols=211 Identities=18% Similarity=0.110 Sum_probs=138.0
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
-.+.+..+...|.|++.|+..++++.+ .|.. ++.+.-| ........ ......
T Consensus 168 ~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~ 219 (419)
T COG1519 168 KFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAE 219 (419)
T ss_pred HHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHH
Confidence 355577788999999999999999997 6655 3333333 22111111 122334
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEec
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (586)
...++..++.+ .++++..+. +..--+.++++.+.+++ ++..++++=.-++ --+.++++..+.+-.+...-.
T Consensus 220 ~~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 220 LAALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred HHHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHHHHHHHcCCeEEeecC
Confidence 56677777753 368888887 33345568889988877 6788887776554 345566666655422221111
Q ss_pred c-------------ChHHHHHHHHhccEEEEcCC-CCCCcHHHHHHHHcCCcEEEcC-CcCccc---ccccCcceEEEcc
Q 007873 465 F-------------NIPLAHMIIAGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVD---TVEEGFTGFQMGS 526 (586)
Q Consensus 465 ~-------------~~~~~~~~l~~aDi~l~PS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e---~v~~g~~G~~~~~ 526 (586)
- .--++..+|..||+.++--. .+-=|=-++|+.++|+|||.-. +--..| -+...+.|+.+
T Consensus 293 ~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 293 GDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 1 01245569999999877644 4455667999999999999875 223333 33344567765
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007873 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (586)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 566 (586)
+|.+.+++.+..++++ +..+++|++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5688888888888887 888889988874
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0063 Score=67.38 Aligned_cols=123 Identities=12% Similarity=0.025 Sum_probs=81.1
Q ss_pred CcEEEEEecCcc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHH--
Q 007873 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-- 474 (586)
Q Consensus 402 ~~~i~~iGrl~~-----~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l-- 474 (586)
.++++..|.... .+-+..+++|+..+ +.++++..++.. .. ...+.|+....+++.. ++|
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~--~~------~~~p~Nv~i~~w~Pq~---~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV--EA------INLPANVLTQKWFPQR---AVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc--Cc------ccCCCceEEecCCCHH---HHhcC
Confidence 367777788642 33456677777776 357766554431 10 2345677766555553 367
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCC--CCHHHHHHHHHH
Q 007873 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRR 548 (586)
Q Consensus 475 ~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~I~~ 548 (586)
..++++|. -+=..++.||+.+|+|+|+-...+ ....+.+-+.|... +. -+.+++.++|.+
T Consensus 363 p~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l----------~~~~~t~~~l~~ai~~ 428 (507)
T PHA03392 363 KNVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL----------DTVTVSAAQLVLAIVD 428 (507)
T ss_pred CCCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe----------ccCCcCHHHHHHHHHH
Confidence 45888883 344567999999999999986543 44455555677765 33 367999999999
Q ss_pred HHHh
Q 007873 549 ALAT 552 (586)
Q Consensus 549 ll~~ 552 (586)
++++
T Consensus 429 vl~~ 432 (507)
T PHA03392 429 VIEN 432 (507)
T ss_pred HhCC
Confidence 9987
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0015 Score=65.58 Aligned_cols=184 Identities=19% Similarity=0.220 Sum_probs=111.0
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
.+..||.+++++....+++.. +|-.+.++..-..+.-+.| ...|.|. .++.+
T Consensus 123 ~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~evlk 174 (346)
T COG1817 123 TLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEVLK 174 (346)
T ss_pred chhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHHHH
Confidence 366799999999888887775 5655543333223333322 3335554 35678
Q ss_pred HhCCCCCCCCcEEEEEe-----cCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 393 EVGLPVDRNIPVIGFIG-----RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iG-----rl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
++|+..+ +..+++=.- -...+++++.+.++++.|.+.. +|++-... ..++.-+.+.+.+ ... ..
T Consensus 175 eLgl~~~-~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i--~pk-~~ 243 (346)
T COG1817 175 ELGLEEG-ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNII--IPK-KA 243 (346)
T ss_pred HcCCCCC-CceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhcccc--CCc-cc
Confidence 8999754 233333221 1235778888999999996533 44444322 2333333333111 000 11
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc---CcccccccCcceEEEccccccccCCCCCCHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 544 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 544 (586)
-+..+++-.|++++ -+-|.-.-||...|+|.|+..-| +..+...+ .|.++ ...|+.+..+
T Consensus 244 vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~----------~s~~~~~~~~ 306 (346)
T COG1817 244 VDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLY----------HSTDEIAIVE 306 (346)
T ss_pred ccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCcee----------ecCCHHHHHH
Confidence 11224777788887 45667788999999999999844 23334443 67776 7778888888
Q ss_pred HHHHHHHh
Q 007873 545 TVRRALAT 552 (586)
Q Consensus 545 ~I~~ll~~ 552 (586)
.+.+.+.+
T Consensus 307 ~a~~~l~~ 314 (346)
T COG1817 307 YAVRNLKY 314 (346)
T ss_pred HHHHHhhc
Confidence 88888866
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0012 Score=68.80 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=74.1
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
.+++|.|. -+...+++++.++ +++.+++ |+... .. ..++.++... .|..+.+..+++.||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35555443 3456777887766 4555544 43221 11 1234456655 4554667789999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcCccc------ccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
-+= ..++.||+++|+|+|.....+..| .+.+...|..+ +..+. ++.+++.+.+++
T Consensus 254 ~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 542 246899999999999998766444 35556677765 66666 444455444444
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.011 Score=61.75 Aligned_cols=200 Identities=17% Similarity=0.109 Sum_probs=129.9
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
.-||.-++.++..++.|.+ -|++.+ +|.++=|-+ |.-.+.-. +..........
T Consensus 144 ~~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~ 197 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAK 197 (383)
T ss_pred HhhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHh
Confidence 3589999999999999996 677755 788887754 32222100 00001112222
Q ss_pred -hCCCCCCCCcEEEEEecCccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccCh
Q 007873 394 -VGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 467 (586)
Q Consensus 394 -~gl~~~~~~~~i~~iGrl~~~-KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 467 (586)
++.. .++.+++..-|-+-. +++..+++++.++.+ ++++++.-=...+ ..+++.. ..++ .++..+-.+.-
T Consensus 198 ~~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~-~v~e~~~--~~L~~~~~v~li~pl~~ 272 (383)
T COG0381 198 GLDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRP-RVRELVL--KRLKNVERVKLIDPLGY 272 (383)
T ss_pred hhccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCCh-hhhHHHH--HHhCCCCcEEEeCCcch
Confidence 2222 233566666666544 899999999988876 5677665443322 2222221 2233 25777777777
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
...+.++..|-+++ -..|..+=||-..|+||++-+. -.-+|.+..| +-.+ -..|.+.+.+.+
T Consensus 273 ~~f~~L~~~a~~il-----tDSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~l-----------vg~~~~~i~~~~ 335 (383)
T COG0381 273 LDFHNLMKNAFLIL-----TDSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNIL-----------VGTDEENILDAA 335 (383)
T ss_pred HHHHHHHHhceEEE-----ecCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEE-----------eCccHHHHHHHH
Confidence 77888999997666 3568889999999999998864 4456665544 4444 356889999999
Q ss_pred HHHHHhcCHHHHHHHHHH
Q 007873 547 RRALATYGTQALAEMMKN 564 (586)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~ 564 (586)
..++++ ++.+++|+..
T Consensus 336 ~~ll~~--~~~~~~m~~~ 351 (383)
T COG0381 336 TELLED--EEFYERMSNA 351 (383)
T ss_pred HHHhhC--hHHHHHHhcc
Confidence 999998 7777777664
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0027 Score=68.47 Aligned_cols=179 Identities=13% Similarity=-0.013 Sum_probs=101.6
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC---CceEEEecc
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 465 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 465 (586)
|+.+|||.+. |+|..--...|=.+..+++..++.+ |+-.|++...+.. .++.+++...+.+ +++.+...-
T Consensus 276 R~~~gLp~d~----vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPEDA----VVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS-GEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--SSS----EEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-HHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCCCc----eEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-HHHHHHHHHHHcCCChhhEEEcCCC
Confidence 7889998543 4444444456777777777777766 8999988765442 4566666666655 367665544
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHH
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 545 (586)
..++-...+..+|++|=|.- =+-+.+.+||+.+|+|||+-....+..=+.. +++ -+..|...-..|.+++.+.
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~a---SiL---~~lGl~ElIA~s~~eYv~~ 423 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGA---SIL---RALGLPELIADSEEEYVEI 423 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHH---HHH---HHHT-GGGB-SSHHHHHHH
T ss_pred CHHHHHHHhhhCCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHH---HHH---HHcCCchhcCCCHHHHHHH
Confidence 55555567899999997643 2347889999999999998874433322111 000 0111111234689999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHh
Q 007873 546 VRRALATYGTQALAEMMKNGM-----AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 546 I~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~~ 583 (586)
-.++.++ ++.++++++.-. ..-|+-+..++.+++.+
T Consensus 424 Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~ 464 (468)
T PF13844_consen 424 AVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAY 464 (468)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHH
T ss_pred HHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 9999998 666666655542 24588888888887754
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0013 Score=61.45 Aligned_cols=130 Identities=19% Similarity=0.270 Sum_probs=71.5
Q ss_pred CcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecC-CccchHHHHHHhhccCCCCCCCceEEEEEcCCccc
Q 007873 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQ 271 (586)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~-~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~ 271 (586)
|...++.-..-.+++.++++.|+.+ .|.|| ||++|. |-. +++++..+ +++|++..+= .+|.
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~GWGe---~Lflkdv~------P~a~li~Y~E-~~y~ 100 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHPGWGE---TLFLKDVF------PDAPLIGYFE-FYYR 100 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcCCcch---hhhHHHhC------CCCcEEEEEE-EEec
Confidence 4445555555566666666666532 46799 777775 543 45677665 7888875431 1111
Q ss_pred cccCcccccccCCChhhccccccccCCCCCcCCcchhhh-hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCe
Q 007873 272 GRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGI 350 (586)
Q Consensus 272 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i 350 (586)
. .-...+.+.++..+. ......+..|.. ...+..+|..++.|.+.++.+-... ..+|
T Consensus 101 ~-----~g~d~~FDpe~p~~~------~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~~-----------r~kI 158 (171)
T PF12000_consen 101 A-----SGADVGFDPEFPPSL------DDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAEF-----------RSKI 158 (171)
T ss_pred C-----CCCcCCCCCCCCCCH------HHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHHH-----------HcCc
Confidence 1 111112111111100 000001112222 3456689999999999988876421 2499
Q ss_pred eEecCCcccCCc
Q 007873 351 KGIVNGMDVQEW 362 (586)
Q Consensus 351 ~vI~ngvd~~~~ 362 (586)
.||+-|||++.+
T Consensus 159 ~VihdGiDt~~~ 170 (171)
T PF12000_consen 159 SVIHDGIDTDRF 170 (171)
T ss_pred EEeecccchhhc
Confidence 999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.01 Score=63.93 Aligned_cols=153 Identities=15% Similarity=0.154 Sum_probs=94.2
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
++.+..|..... .+.+-.++..+.+-++++++...+.+ .. ....+.|+.-...++.. .++..||++|.
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~---~~----~~~~p~n~~v~~~~p~~---~~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR---DT----LVNVPDNVIVADYVPQL---ELLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc---cc----cccCCCceEEecCCCHH---HHhhhcCEEEe
Confidence 455666766655 44444444444445888887764421 01 12344556545444443 38999999996
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHH
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 558 (586)
. +=-.+..||+.+|+|+|+-..+. ..+-+++-..|... ..+..+++.++++|+++|++ +...
T Consensus 307 h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~--~~~~ 372 (406)
T COG1819 307 H----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLAD--DSYR 372 (406)
T ss_pred c----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcC--HHHH
Confidence 4 33457889999999998876542 45566777888775 12368899999999999997 3322
Q ss_pred HHHHH--HHHHhcCCHHHHHHHHHH
Q 007873 559 AEMMK--NGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 559 ~~~~~--~~~~~~fsw~~~a~~~~~ 581 (586)
+...+ +.+.+.-.-+.+++.+++
T Consensus 373 ~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 373 RAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHH
Confidence 22211 223445555555555544
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.014 Score=59.28 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=87.9
Q ss_pred cEEEEEecC-ccccCHHHHHHHHhhcccCCeEEEE-EeC--CChhhHHHHHHHHHHCC--CceEEEecc-ChHHHHHHHH
Q 007873 403 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILYP--EKARGVAKF-NIPLAHMIIA 475 (586)
Q Consensus 403 ~~i~~iGrl-~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~--g~~~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~~l~ 475 (586)
++-+.+|+= ++..++...++++.+....++++++ .|- |.+.|.+++++.+.++- +++.....+ +-++..++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 566667775 5778899999999888778899875 565 77889999988887643 366555555 4466678999
Q ss_pred hccEEEEcC-CCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccCc
Q 007873 476 GADFILIPS-RFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGF 519 (586)
Q Consensus 476 ~aDi~l~PS-~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~ 519 (586)
.||+.++.- +.++.|+.++ .+..|+||+.+. +.-..++.+.|.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC
Confidence 999998876 5689999887 899999998885 555666555543
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.5 Score=51.12 Aligned_cols=211 Identities=14% Similarity=0.112 Sum_probs=110.4
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+++..++++|.|.+=-+...+.+.+ .|++.. ++.+.+ |+..--|.... +....
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~--------------~~~~~ 221 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTE--------------DFTAS 221 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccc--------------ccccc
Confidence 44577789999988777777777765 666533 444433 44332221100 00000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEec-Ccc-cc--------CHHHHHHHHhhcccCCeEEEEEeC--C----ChhhHHHHHHH
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGR-LEE-QK--------GSDILAAAIPHFIKENVQIIVLGT--G----KKPMEKQLEQL 451 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGr-l~~-~K--------G~d~Ll~A~~~l~~~~v~lvIvG~--g----~~~~~~~l~~l 451 (586)
..+....+.+. ..++|++.=| +.+ .| -...+.+++..+.+.+.+++++-. + .+......+++
T Consensus 222 ~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 222 YAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHH
Confidence 01111122221 2356655533 321 11 124566677776655655554442 1 11122333455
Q ss_pred HHHCCCc--eEE-EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC-ccccccc-CcceEEEcc
Q 007873 452 EILYPEK--ARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMGS 526 (586)
Q Consensus 452 ~~~~~~~--v~~-~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~~~~~ 526 (586)
...++.. ... ...++..++..+++.||++|-.-.+ ..+=|++.|+|+|+-.... ...+..+ |...+++
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~-- 372 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI-- 372 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--
Confidence 5554321 221 2235666777899999998864443 3455899999999887421 2222221 1122222
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 007873 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 527 ~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 561 (586)
.++.-++++|.+.+.+++++ .+.+++.
T Consensus 373 ------~~~~l~~~~Li~~v~~~~~~--r~~~~~~ 399 (426)
T PRK10017 373 ------DIRHLLDGSLQAMVADTLGQ--LPALNAR 399 (426)
T ss_pred ------chhhCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 13556788999999999998 5554433
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.011 Score=62.69 Aligned_cols=192 Identities=15% Similarity=0.156 Sum_probs=97.0
Q ss_pred hhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHH
Q 007873 310 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 389 (586)
Q Consensus 310 ~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (586)
........|.+++.|+...+.+.+ .+|.+.+ .++..|..-. |.. ........+.
T Consensus 128 ~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~--------~i~~~G~PR~------D~l----------~~~~~~~~~~ 181 (369)
T PF04464_consen 128 YKRNYRNYDYFIVSSEFEKEIFKK--AFGYPED--------KILVTGYPRN------DYL----------FNKSKENRNR 181 (369)
T ss_dssp HHHHHTT-SEEEESSHHHHHHHHH--HTT--GG--------GEEES--GGG------HHH----------HHSTT-HHHH
T ss_pred hhhhccCCcEEEECCHHHHHHHHH--HhccCcc--------eEEEeCCCeE------hHH----------hccCHHHHHH
Confidence 445567899999999999988885 3666543 2344454211 100 0111112567
Q ss_pred HHHHhCCCCCCCCcEEEEEecCccccCH------H--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 007873 390 LQAEVGLPVDRNIPVIGFIGRLEEQKGS------D--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (586)
Q Consensus 390 l~~~~gl~~~~~~~~i~~iGrl~~~KG~------d--~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~ 461 (586)
+++.++++. ++.+|+|.-.+...... . .-.+.+..+.+.++.+++-.-.. ........ .....++..
T Consensus 182 i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~--~~~~~~~~-~~~~~~i~~ 256 (369)
T PF04464_consen 182 IKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPN--MKKKFKDF-KEDNSNIIF 256 (369)
T ss_dssp HHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHH--HHTT-----TT-TTTEEE
T ss_pred HHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCch--hhhchhhh-hccCCcEEE
Confidence 788888864 44699998665443332 1 12333334445788887765321 22222221 122334543
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc--CC-------cCcccccccCcceEEEcccccccc
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--ST-------GGLVDTVEEGFTGFQMGSFSVDCE 532 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s--~~-------gg~~e~v~~g~~G~~~~~~~~~~~ 532 (586)
.. +.+.+.+++..||++| --++-+++|++.+++|||.- |. |...+ ..+..-|-.+
T Consensus 257 ~~--~~~~~~~ll~~aDiLI-----TDySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~~-------- 320 (369)
T PF04464_consen 257 VS--DNEDIYDLLAAADILI-----TDYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPIV-------- 320 (369)
T ss_dssp -T--T-S-HHHHHHT-SEEE-----ESS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-EE--------
T ss_pred CC--CCCCHHHHHHhcCEEE-----EechhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCcee--------
Confidence 32 2335778999999999 35778999999999999954 33 22222 2223334443
Q ss_pred CCCCCCHHHHHHHHHHHHHh
Q 007873 533 AVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 533 ~v~~~d~~~la~~I~~ll~~ 552 (586)
.+.++|.+.|..++++
T Consensus 321 ----~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 321 ----YNFEELIEAIENIIEN 336 (369)
T ss_dssp ----SSHHHHHHHHTTHHHH
T ss_pred ----CCHHHHHHHHHhhhhC
Confidence 7899999999999887
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.27 Score=50.83 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=98.6
Q ss_pred cEEEEEecC-ccccCHHHHHHHHhhcccCCeEEEE-EeCC--ChhhHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007873 403 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 475 (586)
Q Consensus 403 ~~i~~iGrl-~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~~l~ 475 (586)
+.-+.+|+= ++.-+....++++.+...+++++++ .|-| .++|.+++.+.+.++ + +++.....+ +-++..++++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 555666764 5777788899988886567888776 5555 467888888888875 3 245544444 5567778999
Q ss_pred hccEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHH
Q 007873 476 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (586)
Q Consensus 476 ~aDi~l~PS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~ 551 (586)
.||+.+++.. .++.|+.++ .+.+|+||+.+....+-..+.+..--+++ ..+.-|.+.+.++=+++..
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLAN 332 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhh
Confidence 9999999975 689999888 89999999998866665555554333443 1245566666666555554
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.091 Score=55.18 Aligned_cols=91 Identities=19% Similarity=0.111 Sum_probs=59.3
Q ss_pred cEEEEEecCc-c-ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLE-E-QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~-~-~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+.++.|.=. + .+-+..+++++.++.+...++++.|... . +.+++...+.. .+... + ...++++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~---~--~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS---Y--DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe---c--cHHHHHHhhhHH
Confidence 3445555542 2 3456667799999876557788887654 2 34444333221 12211 1 345799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
+. ..|.+.+|++.+|+|.|..-
T Consensus 240 l~-----~SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FI-----CSGTATLEAALIGTPFVLAY 261 (347)
T ss_pred Hh-----cCcHHHHHHHHhCCCEEEEE
Confidence 85 46899999999999998864
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.003 Score=67.51 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=47.4
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
.|| +||.|...+++++.++.... ++|.+++-|.+..+. +..+++.+-.+..++.-+ ..
T Consensus 401 ~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Yhfs-------------~q 458 (550)
T PF00862_consen 401 KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKYHFS-------------CQ 458 (550)
T ss_dssp --S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-HH-------------HH
T ss_pred CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhccch-------------hh
Confidence 599 99999988899998888874 999999999886422 111111111111111111 12
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQ 329 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~ 329 (586)
+.....+++.||.|||-+.+-..
T Consensus 459 ftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 459 FTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhHHHHHhhcCCEEEEcchHhhc
Confidence 33345678899999998876544
|
4.1.13 from EC in the following reaction: |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.023 Score=60.70 Aligned_cols=153 Identities=12% Similarity=0.102 Sum_probs=87.4
Q ss_pred CcEEEEEecCccccC--HHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 402 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG--~d~Ll~A~~~l~~~~v~lv-IvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
.++++..|.....+. ++.+++++.. .+++++ .+|.+.. ...++ ..+.++......+. ..+++.||
T Consensus 226 ~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~ 293 (392)
T TIGR01426 226 PVVLISLGTVFNNQPSFYRTCVEAFRD---LDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKAD 293 (392)
T ss_pred CEEEEecCccCCCCHHHHHHHHHHHhc---CCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCC
Confidence 356677788643322 2334444443 355554 4565542 12222 23455655544443 25899999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcC
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 554 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 554 (586)
++|..+= ..+++||+++|+|+|+....+ ..+.+.+...|..+. -..-++++++++|++++++
T Consensus 294 ~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~-- 359 (392)
T TIGR01426 294 AFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSD-- 359 (392)
T ss_pred EEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcC--
Confidence 9996432 247899999999999976443 333455556676540 0233689999999999987
Q ss_pred HHHH---HHHHHHHHHhcCCHHHHHHHHHH
Q 007873 555 TQAL---AEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 555 ~~~~---~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
++.. +++.+. +...-.-+..++.+++
T Consensus 360 ~~~~~~~~~l~~~-~~~~~~~~~aa~~i~~ 388 (392)
T TIGR01426 360 PRYAERLRKMRAE-IREAGGARRAADEIEG 388 (392)
T ss_pred HHHHHHHHHHHHH-HHHcCCHHHHHHHHHH
Confidence 4422 233322 2233355555555544
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.15 Score=50.29 Aligned_cols=192 Identities=19% Similarity=0.239 Sum_probs=104.6
Q ss_pred CCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCc
Q 007873 226 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 305 (586)
Q Consensus 226 ~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 305 (586)
+.|| ++.+-...++.+..++++.+ .++++|-..|. + +|
T Consensus 69 ~~Pd-l~I~aGrrta~l~~~lkk~~------~~~~vVqI~~P-----r----------lp-------------------- 106 (329)
T COG3660 69 QRPD-LIITAGRRTAPLAFYLKKKF------GGIKVVQIQDP-----R----------LP-------------------- 106 (329)
T ss_pred CCCc-eEEecccchhHHHHHHHHhc------CCceEEEeeCC-----C----------CC--------------------
Confidence 4699 66666888999999999886 46566655552 1 11
Q ss_pred chhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHH
Q 007873 306 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385 (586)
Q Consensus 306 ~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (586)
....|.|+..-.++.++... .|.+ ++ .+.+.+|-+..+...+
T Consensus 107 --------~~~fDlvivp~HD~~~~~s~---~~~N---il---pi~Gs~h~Vt~~~lAa--------------------- 148 (329)
T COG3660 107 --------YNHFDLVIVPYHDWREELSD---QGPN---IL---PINGSPHNVTSQRLAA--------------------- 148 (329)
T ss_pred --------cccceEEeccchhhhhhhhc---cCCc---ee---eccCCCCcccHHHhhh---------------------
Confidence 33578888877777766332 1211 11 2333344443222111
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEecCccccCH--HHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHH-CCCc
Q 007873 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEIL-YPEK 458 (586)
Q Consensus 386 ~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~--d~Ll~A~~~l~~----~~v~lvIvG~g~~~~~~~l~~l~~~-~~~~ 458 (586)
..++++....++ ...+-+++|.-.+.-.. |...+-+..+.+ ....|++--+-. -.+.++++... ++ .
T Consensus 149 ~~e~~~~~~p~~---rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~-s 222 (329)
T COG3660 149 LREAFKHLLPLP---RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLN-S 222 (329)
T ss_pred hHHHHHhhCCCC---CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccc-c
Confidence 233444433333 45788899987665544 333333333322 467777655432 22333333332 22 1
Q ss_pred eEEEeccCh-----HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 459 ARGVAKFNI-----PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 459 v~~~~~~~~-----~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
..+.+ ++. .=...+|+.||.++.+.-. =.-.-||.+.|+||.+--
T Consensus 223 ~~~i~-w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~ 272 (329)
T COG3660 223 SPGIV-WNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFILE 272 (329)
T ss_pred CceeE-eCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEe
Confidence 11111 111 1234699999999987542 233579999999997654
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.03 Score=58.06 Aligned_cols=202 Identities=13% Similarity=0.093 Sum_probs=128.0
Q ss_pred CCEEEEeCHHH-HHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhC
Q 007873 317 SDMVLTVSPHY-AQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (586)
Q Consensus 317 ad~vitvS~~~-~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 395 (586)
.|.|++.++.. ++.+.+ +.| ..+...++.++|...|.|.+..
T Consensus 139 fd~v~~~g~~l~~~~yyq--~~~--------~~~~~~~~~a~d~~~~~~i~~d--------------------------- 181 (373)
T COG4641 139 FDNVLSFGGGLVANKYYQ--EGG--------ARNCYYLPWAVDDSLFHPIPPD--------------------------- 181 (373)
T ss_pred hhhhhhccchHHHHHHHH--hhc--------ccceeccCccCCchhcccCCcc---------------------------
Confidence 45566667766 444332 011 1267888999999999886521
Q ss_pred CCCCCCCcEEEEEecCccccCHHHHHHHHhhccc-------CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccCh-
Q 007873 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI- 467 (586)
Q Consensus 396 l~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-------~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~- 467 (586)
..-.--+.++|+-.+. ..+.++++.- .+-++.+.|..-. ...+... .-.++...++.+.
T Consensus 182 ---a~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y~--~~~~~~~---~~~~~~yIg~~~~~ 248 (373)
T COG4641 182 ---ASYDVDLNLIGNPYPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRYP--DDIWGRT---WEPNVQYIGYYNPK 248 (373)
T ss_pred ---ccceeeeEEecCCCcc-----HHHHHHHHhhccchhhhccceeeecCCccc--hhhhccc---ccchhhhhhccCcc
Confidence 0011247888887765 3333333322 1345666776510 0011110 1112333344433
Q ss_pred HHHHHHHHhccEEEEcCCC---CC---CcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHH
Q 007873 468 PLAHMIIAGADFILIPSRF---EP---CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~---E~---~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 541 (586)
...+..++.-|+.+.=++. ++ +.+-+.|+|+||.|.|++...++.-.+.+|..=++. .|..+
T Consensus 249 ~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~------------~d~kd 316 (373)
T COG4641 249 DGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY------------QDSKD 316 (373)
T ss_pred chhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe------------cCHHH
Confidence 4455677777777765553 22 378899999999999999999999999998766654 89999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHH
Q 007873 542 VSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEE 582 (586)
Q Consensus 542 la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~ 582 (586)
+.+.++.++.. +..++++.+.+. ...++.+.-+.+++++
T Consensus 317 l~~~~~yll~h--~~erkeiae~~ye~V~~~ht~~~r~~~~~~~ 358 (373)
T COG4641 317 LKEKLKYLLNH--PDERKEIAECAYERVLARHTYEERIFKLLNE 358 (373)
T ss_pred HHHHHHHHhcC--cchHHHHHHhhHHHHHHhccHHHHHHHHHHH
Confidence 99999999998 667778877774 3558888877666654
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.081 Score=60.44 Aligned_cols=263 Identities=20% Similarity=0.243 Sum_probs=162.8
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccc-cccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
.| +|..||++..++|-+++... ..+++-+..|...+ .... ..+ ..
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhspfp-----ssEi~r~l----------------------p~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSPFP-----SSEIYRCL----------------------PV 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCCCC-----hHHHHHhc----------------------cc
Confidence 67 99999999999998888765 47788788885432 1110 110 01
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcch-----hhh----hccCeeEecCCcccCCcCCCCccccccccC
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD-----NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~~-----~~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~ 375 (586)
.+-+-.++..+|.+=..+..++..+.+.+. .|++.. .++ +...+..+|-|+|+..+.-....
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~------- 259 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL------- 259 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-------
Confidence 122344566777777777766665554221 111111 000 12356667888888777433210
Q ss_pred ccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCC----hhhH
Q 007873 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPME 445 (586)
Q Consensus 376 ~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~----~~~~ 445 (586)
..-..-..+++..+ .+..+|+-+-|+...||+-.=+.|+.++.. +.+.++.+..+. ++++
T Consensus 260 -----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~ 329 (732)
T KOG1050|consen 260 -----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVE 329 (732)
T ss_pred -----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHH
Confidence 00011122333333 356789999999999999887788877765 356665555432 2222
Q ss_pred HH---HHHHHH----HCCC----ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC----CcEEEcCCc
Q 007873 446 KQ---LEQLEI----LYPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTG 509 (586)
Q Consensus 446 ~~---l~~l~~----~~~~----~v~-~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G----~PvI~s~~g 509 (586)
+. +..... +++. .+. ..-.++..++-++++.+|+.++.+..++..++.+|...|. .+.|.+..-
T Consensus 330 ~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~ 409 (732)
T KOG1050|consen 330 ELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFI 409 (732)
T ss_pred HHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeec
Confidence 22 222222 2221 111 2222356777789999999999999999999999999873 667777777
Q ss_pred CcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 510 g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
|-.++.+++. .+ +.|.|.++++..|..+++..
T Consensus 410 G~~~tl~d~a--iv----------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 410 GDDTTLEDAA--IV----------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred cccccccccC--EE----------ECCcchHHHHHHHHHHhhcC
Confidence 7777776543 22 49999999999999999873
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=1.5 Score=45.41 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=74.9
Q ss_pred CcEEEEEecCcc-ccCHHHHHHHHhhccc-CCeEEEEEeCCC-hhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 402 IPVIGFIGRLEE-QKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 402 ~~~i~~iGrl~~-~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
..+++.+|.-.. ..=++..++|...+.. ...-++|.|.-- ....+.+...+.+.+ ++. ...|..+ ..+++++|+
T Consensus 220 ~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~-I~~f~~~-~~~ll~gA~ 296 (400)
T COG4671 220 FDILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HIS-IFEFRND-FESLLAGAR 296 (400)
T ss_pred ceEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeE-EEEhhhh-HHHHHHhhh
Confidence 356777775432 2223444555555433 222355666543 233344444444333 343 3345443 446999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCC--cCccccccc---CcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAST--GGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~--gg~~e~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
..|.-+= =+++.|-+++|+|.+.-.. ++-..++.- .+-|++ |...-+.-.++.||++|..+++.
T Consensus 297 ~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~~ 365 (400)
T COG4671 297 LVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALAR 365 (400)
T ss_pred eeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhcccC
Confidence 9985322 2678899999999876653 332222221 123332 11122444589999999999874
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.13 Score=56.18 Aligned_cols=112 Identities=17% Similarity=0.114 Sum_probs=83.7
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHHCC---CceEEEec
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 464 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 464 (586)
|+.+|||++ .++|.+--...|-...+.+...++.+ |+-.|++.|.|+ +.....+++++++.+ .++++...
T Consensus 421 R~~lglp~~----avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPED----AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCC----eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 678899854 35566666667776666666555544 888899888865 567889999998877 36777777
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 465 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 465 ~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
-..+...+.+.-||+++=+.-+ +-..+.+||+.+|+|||+-.
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~ 538 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRV 538 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeec
Confidence 6777777899999999955432 34577999999999998754
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.017 Score=58.34 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=36.9
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~ 128 (586)
|+|++|+.-.+|+ ..||++..+.+|.+.|-+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999888897 789999999999999977766777777764
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.48 Score=49.02 Aligned_cols=117 Identities=16% Similarity=0.078 Sum_probs=71.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCcccc--CHH---HHHHHHhhccc-CCeEEEEEeCC--ChhhHHHHHHHHHHCCCc
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEK 458 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~K--G~d---~Ll~A~~~l~~-~~v~lvIvG~g--~~~~~~~l~~l~~~~~~~ 458 (586)
..+++.+++-. +...+.+.+|.-.... +.+ .|++.+..+.+ ....+.|..+- +++.++.|+++....+ .
T Consensus 134 ~~~~~~~~~~l--~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~ 210 (311)
T PF06258_consen 134 AAAWAPRLAAL--PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-G 210 (311)
T ss_pred HHhhhhhhccC--CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-c
Confidence 33444554422 2335667888654333 333 56666666655 46788888874 3456666666664333 2
Q ss_pred eEEEecc-ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC
Q 007873 459 ARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (586)
Q Consensus 459 v~~~~~~-~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (586)
+..+..- ..+ ...+|+.||.++++.- .-.=+.||.+.|+||.+-...+
T Consensus 211 ~~~~~~~~~nP-y~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENP-YLGFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCc-HHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 3222111 223 4469999999999754 3445889999999998888766
|
The function of this family is unknown. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.37 E-value=1.5 Score=43.99 Aligned_cols=88 Identities=17% Similarity=0.280 Sum_probs=55.1
Q ss_pred EEEEEecCccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lv-IvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
+++..|.-++ |+ +.++.++.|.+.++.+. ++|.+.+.+ +.+....++++ ++.. ..+.+.+..++..||+.+.
T Consensus 161 ilI~lGGsDp-k~--lt~kvl~~L~~~~~nl~iV~gs~~p~l-~~l~k~~~~~~-~i~~--~~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSDP-KN--LTLKVLAELEQKNVNLHIVVGSSNPTL-KNLRKRAEKYP-NINL--YIDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCCh-hh--hHHHHHHHhhccCeeEEEEecCCCcch-hHHHHHHhhCC-Ceee--EecchhHHHHHHhcchhee
Confidence 5666665444 33 33455555544445553 456555434 34445555555 2432 3355667789999999995
Q ss_pred cCCCCCCcHHHHHHHHcCCcE
Q 007873 483 PSRFEPCGLIQLHAMRYGTVP 503 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~Pv 503 (586)
.-|.++.||...|+|.
T Consensus 234 -----AaGstlyEa~~lgvP~ 249 (318)
T COG3980 234 -----AAGSTLYEALLLGVPS 249 (318)
T ss_pred -----ccchHHHHHHHhcCCc
Confidence 4689999999999993
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.15 Score=47.70 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=24.0
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhh
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNI 344 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~ 344 (586)
-..+|..++.|+..++++.+ +|++.+++
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~~I 162 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPERI 162 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChhHE
Confidence 35799999999999999997 89997743
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.23 Score=41.90 Aligned_cols=80 Identities=15% Similarity=0.212 Sum_probs=59.0
Q ss_pred EEEEeCCChhhHHHHHHHHHHCCCceEEE---eccChHH--HHHHHHhccEEEEcCCC---CCCcHHHHHHHHcCCcEEE
Q 007873 434 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 505 (586)
Q Consensus 434 lvIvG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~~l~~aDi~l~PS~~---E~~gl~~lEAma~G~PvI~ 505 (586)
++|+|.-+ .+...++++.++++.....+ ..+.... ++..+..||++|++..+ ..+-.+--+|-..|+|++.
T Consensus 2 vliVGG~~-~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGRE-DRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCc-ccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 56777522 26777888888888777777 4454444 78899999999999875 4456667788899999999
Q ss_pred cCCcCcccc
Q 007873 506 ASTGGLVDT 514 (586)
Q Consensus 506 s~~gg~~e~ 514 (586)
+...|+..+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665544
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=92.59 E-value=1.6 Score=45.57 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=70.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEec-CccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceE-EE
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GV 462 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGr-l~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~-~~ 462 (586)
...+..+++++.+ ...+++..|. ..+.|. .+...+.+..+.+.+.+++++|+.. ..+..+++....+.++. ..
T Consensus 161 ~~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 161 QAAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNLA 237 (334)
T ss_pred HHHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccCC
Confidence 3445566676432 2244455555 346665 4467777777765678999999765 23445555555543333 23
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC
Q 007873 463 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~ 508 (586)
+..+-.++..+++.||++|-.-. |. .==|.|.|+|+|+--.
T Consensus 238 g~~sL~el~ali~~a~l~I~~DS----Gp-~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 238 GETSLDEAVDLIALAKAVVTNDS----GL-MHVAAALNRPLVALYG 278 (334)
T ss_pred CCCCHHHHHHHHHhCCEEEeeCC----HH-HHHHHHcCCCEEEEEC
Confidence 44566777889999999996432 22 2227799999987643
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.55 E-value=1.7 Score=47.69 Aligned_cols=134 Identities=12% Similarity=0.058 Sum_probs=73.1
Q ss_pred CcEEEEEecCcc--ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 402 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 402 ~~~i~~iGrl~~--~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
..+.+..|.... ..-+..+++++... +..|+++..++. ..+.+. .+++.....+.++. ++|+.+++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~~---~~~~lw~~~~~~---~~~~~~---~~~~~~v~~w~pQ~---~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRDS---GVRFLWVARGEA---SRLKEI---CGDMGLVVPWCDQL---KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCch---hhHhHh---ccCCEEEeccCCHH---HHhccCcc
Confidence 356677777642 22245555555544 667776655431 112221 22334333333332 37777776
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccC-cceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
..+-+. +=.++++||+++|+|+|+-...+ ....+.+. ..|+-+.. +.+.-..-+.+++++++++++.+
T Consensus 343 ~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~---~~~~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 343 GGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKR---EVGEETLVGREEIAELVKRFMDL 415 (459)
T ss_pred ceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEec---ccccCCcCcHHHHHHHHHHHhcC
Confidence 332222 23467999999999999986543 44444442 45665410 00000124789999999999975
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=91.92 E-value=6.5 Score=41.33 Aligned_cols=103 Identities=13% Similarity=0.013 Sum_probs=65.0
Q ss_pred CcEEEEEecCccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC-Cc-eEEEeccChHHHHHHHHhc
Q 007873 402 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EK-ARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~-~~-v~~~~~~~~~~~~~~l~~a 477 (586)
..+++..|.-.+.|. .+...+.+..|.+.+.+++++|...+...+..+++..... .. +...+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 456677777667776 4467777777765678999887654322333445544322 12 2234445667788899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~g 509 (586)
|++|-.-. |..=+ |.|.|+|+|+--.+
T Consensus 264 ~l~v~nDS----Gp~Hl-AaA~g~P~v~lfGp 290 (352)
T PRK10422 264 QLFIGVDS----APAHI-AAAVNTPLICLFGA 290 (352)
T ss_pred CEEEecCC----HHHHH-HHHcCCCEEEEECC
Confidence 99995432 33222 77899999876533
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=90.94 E-value=11 Score=38.54 Aligned_cols=100 Identities=14% Similarity=-0.001 Sum_probs=60.0
Q ss_pred cEEEEEecCc---cccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 403 PVIGFIGRLE---EQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 403 ~~i~~iGrl~---~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
+.|++.-|-. ..+.++.+.+++..+.+ .+.+++++.-......+..+++...++.........+.++...+++.||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4566554432 22336677888888765 3666666553322234455566655543222223345667778999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
++|-...+ ..+=|+.+|+|+|+-.
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEee
Confidence 87765543 3445899999999764
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=90.80 E-value=20 Score=36.16 Aligned_cols=141 Identities=13% Similarity=0.091 Sum_probs=76.8
Q ss_pred CcEE---EEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCC-hhhHHHHHH--------------HHHHCCCceEEE
Q 007873 402 IPVI---GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQ--------------LEILYPEKARGV 462 (586)
Q Consensus 402 ~~~i---~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~-~~~~~~l~~--------------l~~~~~~~v~~~ 462 (586)
.+.. +|+||..-.||...+++.-++..+ ++..-++-|=.. ......++. .....+.-+...
T Consensus 180 e~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~ 259 (355)
T PF11440_consen 180 EKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVY 259 (355)
T ss_dssp GSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEE
T ss_pred hhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceec
Confidence 3455 899999999999999998887766 678888888432 112222211 000011124445
Q ss_pred eccChHHHHHHHHhccEEEEcCC------CCCCcHHHHHHHHcCCcEEEcC-CcCccc-------ccccCcceEEEcccc
Q 007873 463 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVAS-TGGLVD-------TVEEGFTGFQMGSFS 528 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~------~E~~gl~~lEAma~G~PvI~s~-~gg~~e-------~v~~g~~G~~~~~~~ 528 (586)
+.+-.++....++.+-+...-+. .+..-.+.+|..|||+.+|--. +|..-. ++... .|.+.
T Consensus 260 ~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~-~~~I~---- 334 (355)
T PF11440_consen 260 GPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHP-YSAIY---- 334 (355)
T ss_dssp SS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS---S-EE----
T ss_pred chhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccC-cceeE----
Confidence 55666677778888887765543 3568899999999998776653 444333 22222 33332
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHh
Q 007873 529 VDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 529 ~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
.+.+|.++-.+.|.++.++
T Consensus 335 -----~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 335 -----FDENDLESTVEKLIEVANN 353 (355)
T ss_dssp -----E-TTSHHHHHHHHHHHHT-
T ss_pred -----eccchHHHHHHHHHHHhcc
Confidence 3888888888877777654
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=90.57 E-value=3.4 Score=45.18 Aligned_cols=130 Identities=8% Similarity=-0.030 Sum_probs=75.2
Q ss_pred CcEEEEEecCc---cccCHHHHHHHHhhcccCCeEEEE-EeCCCh-hhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 402 ~~~i~~iGrl~---~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
..+++..|... ..+-+..++.++..+ ...|++ +..+.. ...+.+ .++.++++....+.++. .+|+.
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~---~~~~~~~~~v~~w~PQ~---~iL~h 344 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGY---VERVSKQGKVVSWAPQL---EVLKH 344 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHH---HHHhccCEEEEecCCHH---HHhCC
Confidence 35777888754 344566666666665 335443 433211 111111 12223445444333443 37777
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc----Cccccccc-CcceEEEccccccccCCCCCCHHHHHHHHHHHHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~ 551 (586)
+++.++=+. +=-++.+||+.+|+|+|+.... .....+.+ -..|+-+ ...+.++++++|++++.
T Consensus 345 ~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 345 QAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred CccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 765333232 2246799999999999987643 34455544 3566654 44678999999999997
Q ss_pred h
Q 007873 552 T 552 (586)
Q Consensus 552 ~ 552 (586)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=90.38 E-value=6 Score=40.79 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=78.7
Q ss_pred cEEEEEecCccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~--d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+++..|.=.+.|.. +...+.+..+.+.+.+++++|+++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 456677765566765 5677777777656788888865542 23344555555543 2334555667778899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcc--eEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT--GFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~--G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
|-+-. |..=+ |.+.|+|+|+--.+.-+........ ..+. .| ..+.=+|+++.+++.++|
T Consensus 259 I~~DS----gp~Hl-Aaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~-----~~-~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 259 VGVDT----GLTHL-AAALDKPTVTLYGATDPGRTGGYGKPNVALL-----GE-SGANPTPDEVLAALEELL 319 (319)
T ss_pred EeCCC----hHHHH-HHHcCCCEEEEECCCCHhhcccCCCCceEEc-----cC-ccCCCCHHHHHHHHHhhC
Confidence 96432 22222 6788999998653332222211111 1111 11 135556777777776653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.076 Score=49.42 Aligned_cols=82 Identities=16% Similarity=0.210 Sum_probs=49.6
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC--------cccccccCcceEEEccccccccCCCCCCHH
Q 007873 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (586)
Q Consensus 469 ~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 540 (586)
.+..+++.||++|. =+=+.++.|++++|+|.|.-...+ ....+.+...|..+ .-...+++
T Consensus 65 ~m~~~m~~aDlvIs----~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~--------~~~~~~~~ 132 (167)
T PF04101_consen 65 NMAELMAAADLVIS----HAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML--------DESELNPE 132 (167)
T ss_dssp SHHHHHHHHSEEEE----CS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS--------ECCC-SCC
T ss_pred hHHHHHHHcCEEEe----CCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc--------CcccCCHH
Confidence 36789999998884 223478999999999998876555 22233333334432 01233478
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHH
Q 007873 541 AVSTTVRRALATYGTQALAEMMKN 564 (586)
Q Consensus 541 ~la~~I~~ll~~~~~~~~~~~~~~ 564 (586)
.|.+.|..++++ ++...++.++
T Consensus 133 ~L~~~i~~l~~~--~~~~~~~~~~ 154 (167)
T PF04101_consen 133 ELAEAIEELLSD--PEKLKEMAKA 154 (167)
T ss_dssp CHHHHHHCHCCC--HH-SHHHCCC
T ss_pred HHHHHHHHHHcC--cHHHHHHHHH
Confidence 899999999987 6555555444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=89.42 E-value=2.4 Score=42.95 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=66.2
Q ss_pred EEEEEecCccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC-CceE-EEeccChHHHHHHHHhccE
Q 007873 404 VIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKAR-GVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 404 ~i~~iGrl~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~-~~v~-~~~~~~~~~~~~~l~~aDi 479 (586)
+++..|.-.+.|. .+...+.++.+.+.+++++++|... .++..+++....+ .++. ..+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4555555555554 4678888888876689999998755 3444555555441 2222 2333455677789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccc
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 513 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 513 (586)
+|-+- .|..-+ |.+.|+|+|+--.+..++
T Consensus 202 ~I~~D----sg~~Hl-A~a~~~p~i~l~g~~~~~ 230 (279)
T cd03789 202 VVTND----SGPMHL-AAALGTPTVALFGPTDPA 230 (279)
T ss_pred EEeeC----CHHHHH-HHHcCCCEEEEECCCCcc
Confidence 99754 244444 569999998876544443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=89.19 E-value=2.3 Score=39.44 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=25.1
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEec
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~ 127 (586)
|||+++.+++ .|.-...+..|++.+ -|+++++|-.
T Consensus 1 M~ILlle~y~-----ggSHk~~~~~L~~~~---~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPYY-----GGSHKQWADGLAAHS---EHEWTLLTLP 35 (168)
T ss_pred CeEEEEcccc-----ccCHHHHHHHHHHhc---cCCEEEEEcC
Confidence 8999999764 455555666666666 4888888853
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.75 E-value=2.8 Score=41.46 Aligned_cols=103 Identities=15% Similarity=0.083 Sum_probs=61.4
Q ss_pred CCcEEEEEecCccccCHHH--HHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC-ceEEEeccChHHHHHHHHhc
Q 007873 401 NIPVIGFIGRLEEQKGSDI--LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~--Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~~l~~a 477 (586)
+..+++..|.-.+.|.... ..+.+..+.+...+++++|...+..++..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 3456777777777887544 88888888765688999998764344555556554432 24444455667777899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~ 508 (586)
|++|-+-. |.. -=|.|.|+|+|+--.
T Consensus 185 ~~~I~~Dt----g~~-HlA~a~~~p~v~lfg 210 (247)
T PF01075_consen 185 DLVIGNDT----GPM-HLAAALGTPTVALFG 210 (247)
T ss_dssp SEEEEESS----HHH-HHHHHTT--EEEEES
T ss_pred CEEEecCC----hHH-HHHHHHhCCEEEEec
Confidence 99997532 333 237889999988743
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=88.21 E-value=7.2 Score=40.76 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=63.8
Q ss_pred cEEEEEecCccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC-ceE-EEeccChHHHHHHHHhcc
Q 007873 403 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KAR-GVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 403 ~~i~~iGrl~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~-~v~-~~~~~~~~~~~~~l~~aD 478 (586)
.+++..|.-.+.|. .+...+.+..+.+.+.+++++|...+...+..+++....+. ++. ..+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666555565 45666777666556788999986543233344555444332 233 334456677888999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~g 509 (586)
++|-+- .|..=+ |.|.|+|+|+--.+
T Consensus 263 l~Vs~D----SGp~Hl-AaA~g~p~v~Lfgp 288 (344)
T TIGR02201 263 LFIGVD----SVPMHM-AAALGTPLVALFGP 288 (344)
T ss_pred EEEecC----CHHHHH-HHHcCCCEEEEECC
Confidence 999642 233322 78999999986533
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=88.07 E-value=6.8 Score=42.78 Aligned_cols=138 Identities=7% Similarity=0.049 Sum_probs=72.5
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
..+.+.+|.... -..+.+.+.+.-|...++-.++-.+......+.+.+.. .+.++....+.++. ++|+...+..
T Consensus 265 svvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~W~PQ~---~iL~H~~v~~ 338 (449)
T PLN02173 265 SVVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLKWSPQL---QVLSNKAIGC 338 (449)
T ss_pred ceEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeCCCCHH---HHhCCCccce
Confidence 356677787642 23445555555553334333332111111111111111 13345544443432 3787777544
Q ss_pred EcCCCCCCc-HHHHHHHHcCCcEEEcCCcC----cccccccC-cceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 482 IPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 482 ~PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
+-+. || ++++||+++|+|+|+-..-+ ....+.+. ..|+-+..- +.+ ..-+.++++++|++++.+
T Consensus 339 FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~--~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 339 FMTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE--KES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred EEec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec--ccC--CcccHHHHHHHHHHHhcC
Confidence 4333 54 78999999999999986433 44455543 566654100 000 012789999999999975
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=87.21 E-value=12 Score=39.00 Aligned_cols=100 Identities=21% Similarity=0.224 Sum_probs=70.0
Q ss_pred cEEEEEe-cCccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 403 PVIGFIG-RLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 403 ~~i~~iG-rl~~~KG~--d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
.+++..| .-...|.. +...+.+..+.+...++++.|... .++..+++...++..+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4566667 55566764 467777777766668999999873 677778888777753334445555677789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCc
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~g 509 (586)
+|-+.. |..=+ |.|.|+|+|+--..
T Consensus 255 ~I~~DS----g~~Hl-AaA~~~P~I~iyg~ 279 (334)
T COG0859 255 VIGNDS----GPMHL-AAALGTPTIALYGP 279 (334)
T ss_pred EEccCC----hHHHH-HHHcCCCEEEEECC
Confidence 986543 33333 78999999987633
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=86.11 E-value=19 Score=39.59 Aligned_cols=73 Identities=16% Similarity=0.177 Sum_probs=48.0
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCc----CcccccccCcceEEEccccccccCCCCCCHHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 547 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~ 547 (586)
+|+...+..+-+ .|| ++++||+.+|+|+|+.... .....+.+-+.|+.+.....+ ..-+.++++++|+
T Consensus 352 IL~H~~v~~Fvt---HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av~ 424 (472)
T PLN02670 352 ILSHESVGGFLT---HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESVR 424 (472)
T ss_pred HhcCcccceeee---cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHHH
Confidence 777666633323 354 6799999999999997643 344455556778765110000 1136899999999
Q ss_pred HHHHh
Q 007873 548 RALAT 552 (586)
Q Consensus 548 ~ll~~ 552 (586)
+++.+
T Consensus 425 ~vm~~ 429 (472)
T PLN02670 425 LAMVD 429 (472)
T ss_pred HHhcC
Confidence 99976
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=85.53 E-value=0.98 Score=43.43 Aligned_cols=39 Identities=31% Similarity=0.406 Sum_probs=29.4
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~ 130 (586)
||||+.+..- =.+.-+..|.++|++.||+|.|++|...+
T Consensus 1 M~ILlTNDDG-------i~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDG-------IDAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS--------TTSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCC-------CCCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 8999998762 12234778999998888999999998543
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=84.72 E-value=28 Score=38.08 Aligned_cols=68 Identities=21% Similarity=0.184 Sum_probs=45.8
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCc----CcccccccC-cceEEEccccccccCCCCCCHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
+|+..++-.+-+ .|| ++++||+.+|+|+|+.... .....+.+. ..|+-+. ..-+.++++++|
T Consensus 337 iL~h~~v~~fvt---H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av 404 (451)
T PLN02410 337 VLSHPAVGGFWS---HCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAV 404 (451)
T ss_pred HhCCCccCeeee---cCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHH
Confidence 677655522222 244 5799999999999987643 344444443 5776551 235789999999
Q ss_pred HHHHHh
Q 007873 547 RRALAT 552 (586)
Q Consensus 547 ~~ll~~ 552 (586)
++++.+
T Consensus 405 ~~lm~~ 410 (451)
T PLN02410 405 KRLMVE 410 (451)
T ss_pred HHHHcC
Confidence 999976
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=84.20 E-value=6.5 Score=43.36 Aligned_cols=127 Identities=16% Similarity=0.100 Sum_probs=70.7
Q ss_pred CCcEEEEEecCcc---ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 401 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 401 ~~~~i~~iGrl~~---~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
+..+++..|.+.. .+-.+.+++|++++ ++ ++++.=++.. . .. ++.|+...-+.++. ++|+..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~--~---~~----l~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEP--P---EN----LPKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSH--G---CH----HHTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-cccccccccc--c---cc----ccceEEEeccccch---hhhhcc
Confidence 3456777788642 22245577777776 33 7776655531 1 11 22346444444443 477655
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
.+-++=+. +=-++++||+.+|+|+|+-..-| ....+.+.+.|.... ...-+.+++.++|.++++|
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHHHHHHHHHHHHhh
Confidence 44333222 23456999999999999986432 444555656677651 1223579999999999998
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=84.04 E-value=13 Score=38.91 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=63.9
Q ss_pred HHHHHhCCCCCCCCcEEEEEecC-ccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCC----ceE-
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KAR- 460 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl-~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~----~v~- 460 (586)
.+.+.+++..+ ...+++..|.- .+.|. .+...+.+..+.+.+++++++|+.. .++..+++....+. ++.
T Consensus 169 ~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T PRK10916 169 ETCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRN 245 (348)
T ss_pred HHHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceee
Confidence 34445554322 22445566553 45665 3456666666655678999998654 23344444444331 122
Q ss_pred EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 461 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 461 ~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
..+..+-.++..+++.||++|-.-. |..=+ |.|.|+|+|+--
T Consensus 246 l~g~~sL~el~ali~~a~l~I~nDT----Gp~Hl-AaA~g~P~valf 287 (348)
T PRK10916 246 LAGETQLEQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVALY 287 (348)
T ss_pred ccCCCCHHHHHHHHHhCCEEEecCC----hHHHH-HHHhCCCEEEEE
Confidence 2234455667789999999995432 22222 788999998754
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.71 E-value=3.6 Score=41.48 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCcEEEEEecCccc-------cCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHHCCCceEEEeccCh
Q 007873 400 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~-------KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
.+++.|+++...... .....+++.+..+.+ |+.+++|==-... .....+.++.. .. ++... .+.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~-~~~~~--~~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LP-NVVII--DDD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CC-CeEEE--CCC
Confidence 356788888887654 233445555555443 5777776433210 01122222221 11 12211 122
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 508 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~ 508 (586)
-...+++..||.++. --+.+.+||+.+|+||++-..
T Consensus 191 ~~~~~Ll~~s~~Vvt-----inStvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 191 VNLYELLEQSDAVVT-----INSTVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCHHHHHHhCCEEEE-----ECCHHHHHHHHcCCceEEecC
Confidence 345579999999884 356799999999999999754
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=83.50 E-value=17 Score=39.79 Aligned_cols=137 Identities=11% Similarity=-0.012 Sum_probs=75.4
Q ss_pred CcEEEEEecCc--cccCHHHHHHHHhhcccCCeEEEEEeCCCh-------hhHHHH-HHHHHHCC-CceEEEeccChHHH
Q 007873 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILYP-EKARGVAKFNIPLA 470 (586)
Q Consensus 402 ~~~i~~iGrl~--~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~-------~~~~~l-~~l~~~~~-~~v~~~~~~~~~~~ 470 (586)
..+.+.+|... ..+-+..|..++.... ..|+.+=..+. .....+ +...++.. .++....+.++.
T Consensus 271 sVvyvsfGS~~~~~~~q~~ela~gL~~s~---~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~-- 345 (451)
T PLN03004 271 SVVFLCFGSLGLFSKEQVIEIAVGLEKSG---QRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQV-- 345 (451)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHCC---CCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHH--
Confidence 45677778773 3445566666666652 24443322110 011101 11111121 234444444443
Q ss_pred HHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCC----cCccccccc-CcceEEEccccccccCCCCCCHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVST 544 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~ 544 (586)
++|+.+++..+-+. || ++++||+++|+|+|+... ......+.+ -+.|+.+.. + .-..-+.+++++
T Consensus 346 -~iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~---~--~~~~~~~e~l~~ 416 (451)
T PLN03004 346 -PVLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNE---S--ETGFVSSTEVEK 416 (451)
T ss_pred -HHhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecC---C--cCCccCHHHHHH
Confidence 38888888443333 44 679999999999999764 334545543 367776510 0 000237899999
Q ss_pred HHHHHHHh
Q 007873 545 TVRRALAT 552 (586)
Q Consensus 545 ~I~~ll~~ 552 (586)
+|++++++
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999976
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=83.13 E-value=17 Score=39.57 Aligned_cols=72 Identities=7% Similarity=0.054 Sum_probs=46.7
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCcC----ccccccc-CcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
+|+...+-++-+. || ++++||+++|+|+|+-..-+ ....+.+ -..|..++.. .-..-+.++++++|
T Consensus 324 iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-----~~~~~~~~~l~~ai 395 (442)
T PLN02208 324 ILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE-----KTGWFSKESLSNAI 395 (442)
T ss_pred HhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc-----cCCcCcHHHHHHHH
Confidence 7777766444333 55 66999999999999976432 4444333 4567665100 00013789999999
Q ss_pred HHHHHh
Q 007873 547 RRALAT 552 (586)
Q Consensus 547 ~~ll~~ 552 (586)
++++++
T Consensus 396 ~~~m~~ 401 (442)
T PLN02208 396 KSVMDK 401 (442)
T ss_pred HHHhcC
Confidence 999976
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=83.04 E-value=24 Score=38.69 Aligned_cols=138 Identities=11% Similarity=0.075 Sum_probs=73.0
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEE-EeCCC-hhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
..+.+..|..... .-+.+-+.+..|...+.+|++ ++... ......+++... +++.. ...|-.+. ++|+.+.+
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCc
Confidence 3567777876532 334444444444343556554 44321 111122222211 12222 22343322 38888873
Q ss_pred EEEcCCCCCCc-HHHHHHHHcCCcEEEcCCcC----ccccccc-CcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 480 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 480 ~l~PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
..+-+ .|| ++++||+.+|+|+|+-...+ ....+.+ -+.|+.+..-.. -..-+.++++++|++++.+
T Consensus 344 g~Fit---H~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~----~~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVT---HCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAV----DGELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEe---eCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecccc----CCcCCHHHHHHHHHHHhcC
Confidence 33322 244 57999999999999986433 4445554 467776510000 0124789999999999976
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=82.34 E-value=23 Score=38.94 Aligned_cols=139 Identities=14% Similarity=0.041 Sum_probs=69.3
Q ss_pred CcEEEEEecCc--cccCHHHHHHHHhhcccCCeEEE-EEeCCChhh---HHHH-HHHHHHCCCceEEEeccChHHHHHHH
Q 007873 402 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQII-VLGTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMII 474 (586)
Q Consensus 402 ~~~i~~iGrl~--~~KG~d~Ll~A~~~l~~~~v~lv-IvG~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l 474 (586)
..+.+.+|.+. ..+-+..+++++..+ +..|+ +++...... ...+ +...++..++.....+.++. .+|
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~---~iL 354 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQV---EIL 354 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHH---HHh
Confidence 35666777763 233466666666665 44554 344221100 0000 01111111222222222332 267
Q ss_pred Hhcc--EEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCcC----ccc-ccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 475 AGAD--FILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 475 ~~aD--i~l~PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
+... .|| -.|| ++.+||+++|+|+|+-...+ ... ++..-+.|+.+..... -+.-..-+.++++++|
T Consensus 355 ~h~~vg~fv-----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~-~~~~~~~~~~~l~~av 428 (475)
T PLN02167 355 AHKAIGGFV-----SHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYV-SAYGEIVKADEIAGAV 428 (475)
T ss_pred cCcccCeEE-----eeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccc-cccCCcccHHHHHHHH
Confidence 6644 444 2354 47999999999999886433 332 2444456765410000 0000123689999999
Q ss_pred HHHHHh
Q 007873 547 RRALAT 552 (586)
Q Consensus 547 ~~ll~~ 552 (586)
++++.+
T Consensus 429 ~~~m~~ 434 (475)
T PLN02167 429 RSLMDG 434 (475)
T ss_pred HHHhcC
Confidence 999975
|
|
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=82.18 E-value=6.2 Score=34.68 Aligned_cols=83 Identities=17% Similarity=0.089 Sum_probs=39.5
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCe----eeEEEEEEEEeC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDK----IEKVRFFHCHKR 160 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 160 (586)
|||+|+-.... ...=..+....|+.+..++||+|.++.+..-.+.+..-......+.+.+. .+..........
T Consensus 1 Mki~fvmDpi~---~i~~~kDTT~alm~eAq~RGhev~~~~~~dL~~~~g~~~a~~~~v~~~~~~~~~~~~~~~~~~~L~ 77 (119)
T PF02951_consen 1 MKIAFVMDPIE---SIKPYKDTTFALMLEAQRRGHEVFYYEPGDLSLRDGRVWARARPVEVKDDPKDWYKLGEEEEIPLD 77 (119)
T ss_dssp -EEEEEES-GG---G--TTT-HHHHHHHHHHHTT-EEEEE-GGGEEEETTEEEEEEEEEEE-S-SS--EEEEEEEEEEGG
T ss_pred CeEEEEeCCHH---HCCCCCChHHHHHHHHHHCCCEEEEEEcCcEEEECCEEEEEEEEEEEecCCCCcEecCCcEEcccc
Confidence 89999986321 11112335667889999999999999987322222111111222333221 122222233456
Q ss_pred CceEEEEcCc
Q 007873 161 GVDRVFVDHP 170 (586)
Q Consensus 161 gv~~~~v~~~ 170 (586)
.++++++...
T Consensus 78 ~~DvvlmRkD 87 (119)
T PF02951_consen 78 DFDVVLMRKD 87 (119)
T ss_dssp GSSEEEEE--
T ss_pred cCCEEEEecC
Confidence 7888877543
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.58 E-value=16 Score=40.23 Aligned_cols=74 Identities=18% Similarity=0.070 Sum_probs=45.9
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCc----Cccccc-ccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 473 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 473 ~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
+|+.+++..+-+. || ++.+||+.+|+|+|+-..- -....+ +.-+.|+.+.. +-..-..-+.++++++|
T Consensus 352 iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~---~~~~~~~~~~e~l~~av 425 (480)
T PLN00164 352 ILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKV---DRKRDNFVEAAELERAV 425 (480)
T ss_pred HhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecc---ccccCCcCcHHHHHHHH
Confidence 7777775333232 44 5799999999999997643 244333 33466765410 00000113689999999
Q ss_pred HHHHHh
Q 007873 547 RRALAT 552 (586)
Q Consensus 547 ~~ll~~ 552 (586)
++++.+
T Consensus 426 ~~vm~~ 431 (480)
T PLN00164 426 RSLMGG 431 (480)
T ss_pred HHHhcC
Confidence 999975
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=80.42 E-value=3.3 Score=36.53 Aligned_cols=46 Identities=13% Similarity=0.034 Sum_probs=31.0
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccc
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 513 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 513 (586)
..+.+++..+|++|--|..+..--.+-.++.+|+|+|+--+|.-.+
T Consensus 59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 3456788889999987765555556667888999999988877543
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=80.18 E-value=8 Score=31.88 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=24.4
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCC
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 268 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~ 268 (586)
+.| |||.|...+.+..-.+.... ..|.++|||-|++
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 478 99999876665443332221 1589999999965
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 586 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 0.0 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 1e-53 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 2e-51 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 3e-51 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 1e-50 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 6e-50 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 2e-11 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 3e-11 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 3e-11 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 1e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 7e-06 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 9e-06 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 8e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 603 bits (1557), Expect = 0.0
Identities = 166/503 (33%), Positives = 244/503 (48%), Gaps = 51/503 (10%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEF 60
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALS 115
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
AA + + D+V A+DW ++ P Y++ +
Sbjct: 116 LAAARIGAGVLPG--------WRPDMVH-AHDWQAAMTPVYMRYAE-----TPEIPSLLT 161
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IHNIA+QG+F F L LPA + I+ YN ++++K G+ + + TVS
Sbjct: 162 IHNIAFQGQFGANIFSKLALPAHA-FGMEGIEYYND------VSFLKGGLQTATALSTVS 214
Query: 325 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA 382
P YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A+ +
Sbjct: 215 PSYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAAN-LKN 272
Query: 383 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK 442
+ L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 273 RALNKKAVAEHFRIDDD-GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
Query: 443 PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV 502
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +
Sbjct: 332 ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391
Query: 503 PIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553
P+VA TGGL DTV + TG Q PV + + +RR + Y
Sbjct: 392 PVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441
Query: 554 GTQAL-AEMMKNGMAQDLSWKVS 575
L +M K GM D+SW+ S
Sbjct: 442 HDPKLWTQMQKLGMKSDVSWEKS 464
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 600 bits (1550), Expect = 0.0
Identities = 149/506 (29%), Positives = 236/506 (46%), Gaps = 56/506 (11%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIEL 143
+ +L V +E+ P KTGGL DV+G LP A A+G + P + + D VV
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR 60
Query: 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLL 203
+ H GV +D P + Y Y DN LRF+LL
Sbjct: 61 DTFA--GHITLLFGHYNGVGIYLIDAPHLYDR-----PGSPYHDTNLFAYTDNVLRFALL 113
Query: 204 CQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF 263
E L+ P+ V A+DWH L P YL +P AK VF
Sbjct: 114 GWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVF 158
Query: 264 CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323
+HN+AYQG F + LP F + ++ + I+++KAG+ +D + V
Sbjct: 159 TVHNLAYQGMFYAHHMNDIQLPWSF-FNIHGLEFNGQ------ISFLKAGLYYADHITAV 211
Query: 324 SPHYAQELVSGEDKGVELDNII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379
SP YA+E+ + ++ ++ R+ + G++NG+D + W+P TD + +Y T
Sbjct: 212 SPTYAREITEPQ-FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT- 269
Query: 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT 439
++ K K LQ +GL VD +P+ + RL QKG D++ A+P +++ Q+ +LG
Sbjct: 270 LEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGA 329
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G +++ YP + ++ +H I+ GAD IL+PSRFEPCGL QL+ ++Y
Sbjct: 330 GDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY 389
Query: 500 GTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550
GT+P+V TGGL DTV + +GF + + ++ +RRA
Sbjct: 390 GTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRAF 439
Query: 551 ATYGTQAL-AEMMKNGMAQDLSWKVS 575
+ +L + + MA D SW+V+
Sbjct: 440 VLWSRPSLWRFVQRQAMAMDFSWQVA 465
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 443 bits (1142), Expect = e-152
Identities = 103/497 (20%), Positives = 174/497 (35%), Gaps = 86/497 (17%)
Query: 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELK 144
+ +L +G E P K GGL + L + ALA+ GH V+ P + +++ + +++
Sbjct: 3 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIR 57
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC 204
V + +V+ + + + + +YG + +
Sbjct: 58 VFGEEVQVKVSYEERGNLRIYRIGGGLL-------DSEDVYG----PGWDGLIRKAVTFG 106
Query: 205 QAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 264
+A++ L DVV +DWHT +K +K VF
Sbjct: 107 RASVLLLNDLLREEPLP-------DVV-HFHDWHTVFAGALIKKYFKIP-------AVFT 151
Query: 265 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324
IH + A F L + Y I+ G +D+V TVS
Sbjct: 152 IHRLNKSKLPA-FYFHEAGLSE--------LAPYPD------IDPEHTGGYIADIVTTVS 196
Query: 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 384
Y + G + + I + NG+D WN ++
Sbjct: 197 RGYLIDE-----WGFFRN---FEGKITYVFNGIDCSFWNESYLT------------GSRD 236
Query: 385 LLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK----ENVQIIVLGT 439
K++L ++ G+ FIGR QKG D+L AI + ++ I++G
Sbjct: 237 ERKKSLLSKFGMDEG---VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGK 293
Query: 440 GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY 499
G +E LE + + + DF++IPS FEP GL+ L AM
Sbjct: 294 GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL 353
Query: 500 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559
G +PI ++ GGL D + TG D ++ + +AL +
Sbjct: 354 GAIPIASAVGGLRDIITNE-TGI---LV-------KAGDPGELANAILKALELSRSDLSK 402
Query: 560 -EMMKNGMAQDLSWKVS 575
A SW+ S
Sbjct: 403 FRENCKKRAMSFSWEKS 419
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 9e-91
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 352 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL 411
G NG+D WN ++ K++L ++ G+ FIGR
Sbjct: 1 GSHNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDEG---VTFMFIGRF 45
Query: 412 -EEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466
QKG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 DRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLS 105
Query: 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 526
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D + TG
Sbjct: 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGIL--- 161
Query: 527 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 572
V D ++ + +AL L++ +N + +S+
Sbjct: 162 -------VKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 199
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-22
Identities = 36/265 (13%), Positives = 84/265 (31%), Gaps = 51/265 (19%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
+S ++ ++ + + E + + G+
Sbjct: 136 KSTKLMMLTDKQIADFQ--KHYQTEPERFQI------LPPGIYPDRKYS----------- 176
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII 435
+ P +E + + G+ + ++ +G +KG D A+ +
Sbjct: 177 -----EQIPNSREIYRQKNGIKEQQ--NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT 229
Query: 436 VLGTGKKPMEKQLEQLEILYPEKARGVA---KFNIPLAHM--IIAGADFILIPSRFEPCG 490
+L + ++ E L + GV F + ++A AD +L P+ E G
Sbjct: 230 LLFVVGQDKPRKFEALA-----EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAG 284
Query: 491 LIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549
++ L A+ G P++ + G + + G + +P ++ +R+A
Sbjct: 285 IVLLEAITAGL-PVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKA 334
Query: 550 LATYGTQALAEMMKNG--MAQDLSW 572
L + +N A
Sbjct: 335 LTQ--SPLRMAWAENARHYADTQDL 357
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 2e-22
Identities = 60/273 (21%), Positives = 102/273 (37%), Gaps = 61/273 (22%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
+D++ + Q+L+ + D I + G DV+ ++P D+
Sbjct: 184 NADVLAVNTQEEMQDLM--HHYDADPDRISV------VSPGADVELYSPGNDR------- 228
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE----N 431
E + E+G+P+ V+ F+GRL+ KG +L A+ N
Sbjct: 229 ----------ATERSRRELGIPLHT--KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276
Query: 432 VQIIVLG--TGKKPMEKQLEQLEILYPEKARGVAK---FNIPLAH----MIIAGADFILI 482
+++I+ G +G + + GV K F P + AD + +
Sbjct: 277 LRVIICGGPSGPNATPDTYRHMA-----EELGVEKRIRFLDPRPPSELVAVYRAADIVAV 331
Query: 483 PSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 541
PS E GL+ + A GT P++A+ GGL V EG TG VD A
Sbjct: 332 PSFNESFGLVAMEAQASGT-PVIAARVGGLPIAVAEGETGL----------LVDGHSPHA 380
Query: 542 VSTTVRRALATYGTQALAEMMKNG--MAQDLSW 572
+ + L + M ++ A+ SW
Sbjct: 381 WADALATLLDD--DETRIRMGEDAVEHARTFSW 411
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 5e-22
Identities = 49/262 (18%), Positives = 91/262 (34%), Gaps = 57/262 (21%)
Query: 298 YNKPVRGRKINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
+N + + GI +SD+V VS E EL + I+ + N
Sbjct: 137 ITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETH-------ELVKPNKD--IQTVYNF 187
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKG 416
+D + + L+ E G+ ++ I + K
Sbjct: 188 IDERVYFKRD--------------------MTQLKKEYGISESE--KILIHISNFRKVKR 225
Query: 417 SDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA---KF--NIPLA 470
+ A + E + +++++G G P + QL K + F
Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDG--PEFCTILQLV-----KNLHIEDRVLFLGKQDNV 278
Query: 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSV 529
++A +D +L+ S E GL+ L AM G VP + + GG+ + ++ G TG+
Sbjct: 279 AELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVIQHGDTGY------- 330
Query: 530 DCEAVDPVDVAAVSTTVRRALA 551
+ D V+ + L
Sbjct: 331 ---LCEVGDTTGVADQAIQLLK 349
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 2e-20
Identities = 70/476 (14%), Positives = 136/476 (28%), Gaps = 108/476 (22%)
Query: 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159
GG + + ALA G +V I R + KD + E+ + KVR
Sbjct: 32 FGGQLVYVKEVSLALAEMGVQV-DIITR--RIKDENWPEFSGEIDYYQETNKVR------ 82
Query: 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSN 219
+ R+ FL K +L + L + +
Sbjct: 83 --IVRIPFGGDKFLPK--------------------EEL-WPYLHEYVNKIINFYREEGK 119
Query: 220 KYFSGPYGEDVVFVANDWHTSLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFED 278
VV + L LK + P F H++ Q
Sbjct: 120 FP-------QVV-TTHYGDGGLAGVLLKNIKGLP--------FTFTGHSLGAQKM----- 158
Query: 279 FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKG 338
L + + + + R I + + +D ++ + S +
Sbjct: 159 ---EKLNVNTSNFKEMDERFKFHRR---IIAERLTMSYADKIIVSTSQERFGQYSHDLYR 212
Query: 339 VELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398
++ I G++ + ++ K + + L+ ++G
Sbjct: 213 GAVNVEDDDK-FSVIPPGVNTRVFDGEYGD------------KIKAKITKYLERDLGSE- 258
Query: 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQ-IIVLGTGKKPMEKQLEQLEILY 455
+P I RL+++K L A + + ++ L + P E +
Sbjct: 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEK 318
Query: 456 PE--------KARGVA-KFNIPLAHM----------IIAGADFILIPSRFEPCGLIQLHA 496
K ++ + + + + S +EP GL + A
Sbjct: 319 EILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEA 378
Query: 497 MRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551
M G P V + GG + ++ G G VDP D ++ + +A
Sbjct: 379 MASGL-PAVVTRNGGPAEILDGGKYGV----------LVDPEDPEDIARGLLKAFE 423
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 3e-20
Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 66/253 (26%)
Query: 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYD 375
E D++ +S + + + +G+DV+ + P
Sbjct: 140 EVDVLTYISQYTLRRFK---SAFGSHPTFEH------LPSGVDVKRFTP----------- 179
Query: 376 ASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQ 433
A P K A + ++G PVI RL +KG D L A+P I + Q
Sbjct: 180 ------ATPEDKSATRKKLGFTDTT--PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ 231
Query: 434 IIVLGTGKKPMEKQLEQLEILYPEKARGVAK-----FNIPLAHM--IIAGADFILIPSR- 485
++++G+G E L +L A V++ + M +A AD +P+R
Sbjct: 232 LLIVGSG--RYESTLRRL-------ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPART 282
Query: 486 ------FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
E G++ L A G VP++A +GG +TV TG V+ D
Sbjct: 283 RGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPA-TGL----------VVEGSD 330
Query: 539 VAAVSTTVRRALA 551
V +S + L
Sbjct: 331 VDKLSELLIELLD 343
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 4e-18
Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 52/232 (22%)
Query: 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 366
+++ + + D + P Y Q + + + +D
Sbjct: 166 WEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVI-------------MPPSIDPLSEKN-- 210
Query: 367 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 426
++ K + + ++ P+I + R + KG +
Sbjct: 211 -------------VELKQTEILRILERFDVDPEK--PIITQVSRFDPWKGIFDVIEIYRK 255
Query: 427 FIKE--NVQIIVLGTG-------KKPMEKQLEQLEILYPEKARGVAK------FNIPLAH 471
++ VQ++++G EK L ++ + V + +
Sbjct: 256 VKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG-----EDYDVKVLTNLIGVHAREVN 310
Query: 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGF 522
+D IL S E GL AM G P++ GG+ + +G TGF
Sbjct: 311 AFQRASDVILQMSIREGFGLTVTEAMWKG-KPVIGRAVGGIKFQIVDGETGF 361
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 83.9 bits (207), Expect = 5e-17
Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 38/249 (15%)
Query: 350 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 409
+ G D+ + P T++ + S + + + + + D+ P++ +
Sbjct: 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEI-EELLYSDVENKEHLCVLKDKKKPILFTMA 579
Query: 410 RLEEQKGSDILAAAIPHFIK--ENVQIIVLG---------TGKKPMEKQLEQLEILYPEK 458
RL+ K L + E ++V+G +K K++ L Y K
Sbjct: 580 RLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY--K 637
Query: 459 ARGVAKF---------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509
G ++ N L I + P+ +E GL + AM G G
Sbjct: 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697
Query: 510 GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGM- 566
G + + G +GF +DP + T+ E+ K G+
Sbjct: 698 GPAEIIVHGKSGF----------HIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747
Query: 567 --AQDLSWK 573
+ +W+
Sbjct: 748 RIEEKYTWQ 756
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 7e-15
Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 40/188 (21%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKAR- 460
I +GR +K +L A+ + ++ +++ G G P EK+++ L A+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKG--PDEKKIKLL-------AQK 53
Query: 461 -GVAKF-------NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST--GG 510
GV + I+ + + E + L A+ G VP++A++
Sbjct: 54 LGVKAEFGFVNSNELLE---ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 511 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQ 568
+ + +P + +S + L M A
Sbjct: 111 TRQFALDERSL------------FEPNNAKDLSAKIDWWLEN--KLERERMQNEYAKSAL 156
Query: 569 DLSWKVSI 576
+ + + S+
Sbjct: 157 NYTLENSV 164
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 50/288 (17%), Positives = 83/288 (28%), Gaps = 91/288 (31%)
Query: 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK 368
++ + + VS + + I NG+DV +
Sbjct: 153 ILRPYHEKIIGRIAVSDLARRWQMEALGSDAVE-----------IPNGVDVASFAD---- 197
Query: 369 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHF 427
A + R + F+GR E +KG +L AA+P
Sbjct: 198 -----------------------APLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKL 234
Query: 428 IKE--NVQIIVLGTGKKPMEKQLEQLEIL-----------YPEKARGVAKFNIPLAHMII 474
+ +V+I+++G G ++ EQ L KA +
Sbjct: 235 VARFPDVEILIVGRG--DEDELREQAGDLAGHLRFLGQVDDATKAS------------AM 280
Query: 475 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCE 532
AD P E G++ + AM GT +VAS + +G G
Sbjct: 281 RSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVLADGDAGR---------- 329
Query: 533 AVDPVDVAAVSTTVRRAL------ATYGTQALAEMMKNGMAQDLSWKV 574
V D ++ + L A Y +A W V
Sbjct: 330 LVPVDDADGMAAALIGILEDDQLRAGYVARASER------VHRYDWSV 371
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 74.5 bits (182), Expect = 4e-14
Identities = 31/251 (12%), Positives = 70/251 (27%), Gaps = 47/251 (18%)
Query: 183 KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242
I P + ++ + L +V ++W +
Sbjct: 147 GIPSPENDFET-NDAILLGYTVAWFLGE----------VAHLDSQHAIVAHFHEWLAGVA 195
Query: 243 PCYLKTMYKPKGMYKSAKVVFCIH------NIAYQGRFAFEDFGLLNLPAQFKSSFDFID 296
+ +F H + G F F + L + D
Sbjct: 196 LPLCRKRRID------VVTIFTTHATLLGRYLCASGSFDFYN----CLES-----VDVDH 240
Query: 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356
+ + +A +D+ TVS A E ++++++ + NG
Sbjct: 241 EAGRFGIYHRYCIERAAAHSADVFTTVSQITAF----------EAEHLLKRKPDGILPNG 290
Query: 357 MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQK 415
++V ++ + + D ++ +D + GR E + K
Sbjct: 291 LNVIKFQAFHEFQNLHALKKEKINDF---VRGHFHGCFDFDLDNTLYFF-IAGRYEYKNK 346
Query: 416 GSDILAAAIPH 426
G+D+ A+
Sbjct: 347 GADMFIEALAR 357
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 4e-07
Identities = 44/310 (14%), Positives = 86/310 (27%), Gaps = 30/310 (9%)
Query: 286 AQFKSSFDFI--DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDN 343
F FDF + + GR K G DM + L K +
Sbjct: 319 GHFHGCFDFDLDNTLYFFIAGRYEYKNK-GA---DMFIEALARLNYRLKVSGSKKTVVAF 374
Query: 344 IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL---LKEALQAEVG-LPVD 399
I+ ++ + ++ +T + + ++ LP D
Sbjct: 375 IVMPAKNNSF--TVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTD 432
Query: 400 RNI------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEI 453
V+ L ++ L + H + ++ ++L ++ +
Sbjct: 433 LGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRV 492
Query: 454 ---LYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510
+PE + G + PS +EP G G I + G
Sbjct: 493 KMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552
Query: 511 LVDTVEEGFTGFQM---GSFSVDCEAVDPVDVA-AVSTTVRRALATYGTQALAEMMKNG- 565
+E+ Q G + VD P + + + + Q +N
Sbjct: 553 FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQ--RINQRNAT 610
Query: 566 --MAQDLSWK 573
++ L WK
Sbjct: 611 EALSDLLDWK 620
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 1e-10
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 394 VGLPVDRNI-------PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEK 446
PV+ + + R+ +K ++ ++ ++ ++G
Sbjct: 8 HSHPVETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWF--SKGD 63
Query: 447 QLEQLEILYPEKARGVAKF--NIPLAHMI--IAGADFILIPSRFEPCGLIQLHAMRYGTV 502
E+ + A KF ++ +I + +L ++ E GL + AM G
Sbjct: 64 HAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK- 122
Query: 503 PIVAS-TGGLVDTVEEGFTGF 522
P++A GG +TV TG+
Sbjct: 123 PVIAVNEGGFKETVINEKTGY 143
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 3e-10
Identities = 19/223 (8%), Positives = 69/223 (30%), Gaps = 25/223 (11%)
Query: 365 LTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAA 423
L + Y+ + +P + L+ + + +I GR ++ ++ A
Sbjct: 205 LKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNAFTLIVEA 263
Query: 424 IPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM--IIAGAD 478
+ F++ + + ++ G+K + L + + + L ++ +
Sbjct: 264 LKIFVQKYDRSNEWKIISVGEKHKDIAL-------GKGIHLNSLGKLTLEDYADLLKRSS 316
Query: 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 538
+ L +G ++ + D ++ ++
Sbjct: 317 IGISLMISPHPSYPPLEMAHFGL-RVITNKYENKDLSNWHSNIVS----------LEQLN 365
Query: 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581
++ T+ ++ + + + + M ++ ++E
Sbjct: 366 PENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKE 408
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 18/170 (10%)
Query: 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 462
+ F+GR+ KG+ AA ++++ G + +++ Y +
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPA--WEPEYFDEITRRYGSTVEPI 217
Query: 463 AKFNIPLAHMIIAGADFILIPSRF----------EPCGLIQLHAMRYGTVPIVAS-TGGL 511
+ ++A A +L S+ EP + A GT P+V + G L
Sbjct: 218 GEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCL 276
Query: 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR-ALATYGTQALAE 560
+ V G+ EA + S VRR A+ +G +AE
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRRAAVRLWGHVTIAE 326
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 3e-08
Identities = 47/302 (15%), Positives = 84/302 (27%), Gaps = 33/302 (10%)
Query: 235 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF 294
++ I + ++++ + ++ F GL K D
Sbjct: 31 HEVIVFGIHAFGRSVHANIEEFD----AQTAEHVRGLNEQGFYYSGLSEFIDVHK--PDI 84
Query: 295 IDGYNKP-VRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353
+ YN P V G + M + +VL V +N+ +
Sbjct: 85 VMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR----------ENLWWIFSHPKV 134
Query: 354 VNGMDVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLE 412
V M + + G K + V + VGL + + + R
Sbjct: 135 VGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNT 194
Query: 413 EQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470
+K DI A FI + + ++ L + L + + + F
Sbjct: 195 ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254
Query: 471 HMIIAG-------------ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517
MI D I+ S E GL G I+++ GG D
Sbjct: 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314
Query: 518 GF 519
Sbjct: 315 DC 316
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 3e-08
Identities = 51/368 (13%), Positives = 106/368 (28%), Gaps = 96/368 (26%)
Query: 41 RSLNIIDDLQ----VKTMASK---LATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTE 93
L ++ ++Q L T+R + + + + ++ E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 94 V----APW--SKTGGL-GDVLGGLPPALAANGHRVMTIAPRYDQYK--DAWDTDVVIELK 144
V + + L +VL P L+ + +D +K + +IE
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWF----LAKVWGKTQSKIYGPRTGEDYQDNQLRF 200
+ + +E + R VF L+ +W D +
Sbjct: 363 L-NVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFD-----------VIKSDVMVVV 408
Query: 201 SLLCQAALEAPRILNLNSNKYFSGPYGEDVVF---VANDW--HTSLIPCY-LKTMYKPKG 254
+ L + +L + + + + N++ H S++ Y + +
Sbjct: 409 NKLHKYSL-----VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 255 M-------YKSAKVVFCIHNIAY-------QGRFA-----FEDF---------------- 279
+ Y F H I + R F DF
Sbjct: 464 LIPPYLDQY------FYSH-IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516
Query: 280 --GLLNLPAQFKSSFDFI-DGYNKPVRGRKINWMKAGILESDMVLTVSPH--YAQELVSG 334
+LN Q K +I D N P R +N + + + + L S + + +
Sbjct: 517 SGSILNTLQQLKFYKPYICD--NDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Query: 335 EDKGVELD 342
ED+ + +
Sbjct: 575 EDEAIFEE 582
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 586 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.96 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.94 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.93 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.91 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.9 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.88 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.87 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.85 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.8 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.79 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.71 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.69 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.68 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.61 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.59 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.56 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.48 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.48 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.47 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.29 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.21 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.06 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.03 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 98.95 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.92 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.76 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.7 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.1 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.17 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.13 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 96.73 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 96.24 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 95.58 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 95.57 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.01 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 94.99 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 91.86 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 91.2 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 91.14 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 90.57 | |
| 3jte_A | 143 | Response regulator receiver protein; structural ge | 83.78 | |
| 3kht_A | 144 | Response regulator; PSI-II, 11023K, structural gen | 82.5 | |
| 3grc_A | 140 | Sensor protein, kinase; protein structure initiati | 82.32 | |
| 2zay_A | 147 | Response regulator receiver protein; structural ge | 81.89 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-78 Score=665.09 Aligned_cols=502 Identities=69% Similarity=1.156 Sum_probs=455.3
Q ss_pred CCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCc
Q 007873 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (586)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (586)
..||||||++|++|+.|+||++++++.|+++|+++||+|.|++|.|+++.+.++......+.+++....+++++...+|+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 47999999999999999999999999999999999999999999999998888888888899999999999999999999
Q ss_pred eEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchH
Q 007873 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (586)
Q Consensus 163 ~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~ 242 (586)
+++++++|.++.+.|+.++..+|++..|.||.|+..||.+|+++++++++.+......++.+.+++|+|+|+|||+++++
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l~ 167 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL 167 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGSTH
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHHH
Confidence 99999999999999999999999999999999999999999999999999998887888888888888999999999999
Q ss_pred HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 243 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
|.+++..++..+.+.++|+|+|+||+.+||.|+...+..++++..+....++...+..+.+...+++++.++..||.|+|
T Consensus 168 ~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~t 247 (536)
T 3vue_A 168 ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLT 247 (536)
T ss_dssp HHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEEE
T ss_pred HHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEEE
Confidence 99999998888888899999999999999999999999999998888777777777777777889999999999999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
||+.+++++.....+|.+++...+..++.+|+||+|.+.|+|.++.++..+|+..+..+.|..+|..+++++||+.+++.
T Consensus 248 VS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~ 327 (536)
T 3vue_A 248 VSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKI 327 (536)
T ss_dssp SCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTS
T ss_pred cCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCCC
Confidence 99999999987666788777777788999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
|+|+|+||+.++||++.|++|++++.+++.+|+|+|.|+...+..++.+...+++++.+.+.++.++.+.+|++||++|+
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~ 407 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAV 407 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEEE
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheeec
Confidence 99999999999999999999999998889999999999988888899999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHH
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 562 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 562 (586)
||++|+||++++|||+||+|||+|++||++|+|.++.||++++....++..++|.|+++|+++|.++++.+.++.+++|+
T Consensus 408 PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~ 487 (536)
T 3vue_A 408 PSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMV 487 (536)
T ss_dssp CCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred ccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999866567899999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhc
Q 007873 563 KNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 563 ~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
+++|+++|||++++++|++.+.
T Consensus 488 ~~am~~~fSW~~~A~~y~~ly~ 509 (536)
T 3vue_A 488 RNCMNQDLSWKGPAKNWENVLL 509 (536)
T ss_dssp HHHHHSCCSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHH
Confidence 9999999999999999999764
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-50 Score=435.20 Aligned_cols=455 Identities=32% Similarity=0.574 Sum_probs=345.2
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEE-EE-EeCCeeeEEEEEEEEeCCc
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-EL-KVGDKIEKVRFFHCHKRGV 162 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~gv 162 (586)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....+...... .. ..++ .....+...+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999888655899999999999999999999999998754322211111000 00 0010 112233345799
Q ss_pred eEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchH
Q 007873 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 242 (586)
Q Consensus 163 ~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~ 242 (586)
++++++.+.++.+ . ..+|+...+.+|.++..++..+...+.++++.+.. ..+|| |||+|+|..+++
T Consensus 78 ~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~D-ivh~~~~~~~~~ 143 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----P-GSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP--------FWRPD-VVHAHDWHAGLA 143 (485)
T ss_dssp EEEEEECHHHHCC----S-SCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST--------TCCCS-EEEEETGGGTTH
T ss_pred EEEEEeChhhccC----C-CCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc--------CCCCC-EEEeeccchhHH
Confidence 9998876544432 0 01455444556778888887777777776665431 13699 999999998888
Q ss_pred HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 243 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 243 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
+.+++... .++|+|+++|+..+++.+....+..++++..+... .. ..+.....+++..++.+|.+++
T Consensus 144 ~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 144 PAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HG---LEFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp HHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TT---TEETTEEEHHHHHHHHCSEEEE
T ss_pred HHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----cc---ccccccccHHHHHHHhcCeEEe
Confidence 77766211 48999999999876554443333333333322110 00 0001123566778899999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhh--hc--cCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 398 (586)
+|+.+++.+.+. .+|++++.++ +. .++.+||||+|.+.|.|..+..+..+|+..+. ..+...+..+++++|++.
T Consensus 211 ~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~ 288 (485)
T 2qzs_A 211 VSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLKV 288 (485)
T ss_dssp SSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCCC
T ss_pred cCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCCC
Confidence 999999988741 1343222222 12 58999999999999998877777777877664 566677889999999986
Q ss_pred CCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 399 ~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
+++.++|+|+||+.++||++.|++|++.+.+++++|+|+|+|+..+.+.++++..++++++..+..+..+++..+|+.||
T Consensus 289 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 289 DDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp CTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCC
Confidence 55668999999999999999999999999777999999999986678899999988877787666677777789999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC---------cceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
++|+||++|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ +++|+++|+++|.++
T Consensus 369 v~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~l 438 (485)
T 2qzs_A 369 VILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRA 438 (485)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHHH
T ss_pred EEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 899998 999999999999999
Q ss_pred H---HhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 007873 550 L---ATYGTQALAEMMKNGMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 550 l---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (586)
+ ++ ++.+++|++++++++|||+.++++|++.+
T Consensus 439 l~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 439 FVLWSR--PSLWRFVQRQAMAMDFSWQVAAKSYRELY 473 (485)
T ss_dssp HHHHTS--HHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHcCC--HHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 9 46 78899999999989999999999999865
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=434.79 Aligned_cols=454 Identities=35% Similarity=0.592 Sum_probs=347.3
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcc-eEEEE--EeCCeeeEEEEEEEEeCC
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-VVIEL--KVGDKIEKVRFFHCHKRG 161 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~g 161 (586)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....+... ...+. ..+. ..+..+...+|
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g 77 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGE---KADLLEVQHER 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSC---CEEEEEEEETT
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCC---eEEEEEEEecC
Confidence 899999999988645799999999999999999999999998754322211100 00000 0110 12233344589
Q ss_pred ceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhh-cccCCCCCCCCCCCCEEEEecCCccc
Q 007873 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGEDVVFVANDWHTS 240 (586)
Q Consensus 162 v~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~pDvii~~h~~~~~ 240 (586)
++++.++.+.++.+ . ..+|+...+.+|.++..++..+..++.++++.+ + .++|| |||+|+|.++
T Consensus 78 v~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~D-iIh~~~~~~~ 142 (485)
T 1rzu_A 78 LDLLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP---------GWRPD-MVHAHDWQAA 142 (485)
T ss_dssp EEEEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSS---------SCCCS-EEEEEHHHHT
T ss_pred ceEEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhcc---------CCCCC-EEEecccchh
Confidence 99998876544432 0 125554456668888888888887777776654 2 13699 9999999888
Q ss_pred hHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEE
Q 007873 241 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 320 (586)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 320 (586)
+++.+++... ..++|+|+++|+..+++.+....+..++++..+... +. ..+.....+++..++.+|.+
T Consensus 143 ~~~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 143 MTPVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EG---IEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp THHHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TT---TEETTEEEHHHHHHHHCSEE
T ss_pred HHHHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----cc---ccccccccHHHHHHhhcCEE
Confidence 8877776541 148999999999876665554444444444332210 00 00001235667888999999
Q ss_pred EEeCHHHHHHHhcCccCCCcchhhh--hccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCC
Q 007873 321 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (586)
Q Consensus 321 itvS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 398 (586)
+++|+..++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..+. +.+...+..+++++|++.
T Consensus 211 i~~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~ 288 (485)
T 1rzu_A 211 STVSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD 288 (485)
T ss_dssp EESCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC
T ss_pred EecCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCC
Confidence 99999999998741 1232211111 2348999999999999998877777777777664 567777889999999985
Q ss_pred CCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 399 ~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
++ .++|+|+||+.++||++.|++|++.+.+++++|+|+|+|+..+.+.++++..++++++..+..++.+++..+|+.||
T Consensus 289 ~~-~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad 367 (485)
T 1rzu_A 289 DG-SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCD 367 (485)
T ss_dssp SS-SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CC-CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCC
Confidence 42 46999999999999999999999999778999999999986678899999988877888666778888789999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccC---------cceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++|+++|.++
T Consensus 368 v~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~l 437 (485)
T 1rzu_A 368 AIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRT 437 (485)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHH
T ss_pred EEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 899998 999999999999999
Q ss_pred H---HhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 007873 550 L---ATYGTQALAEMMKNGMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 550 l---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (586)
+ ++ ++.+++|++++++++|||+.++++|++.+
T Consensus 438 l~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 438 VRYYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALY 472 (485)
T ss_dssp HHHHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHH
T ss_pred HHHhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 9 56 88899999999989999999999999865
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=406.41 Aligned_cols=419 Identities=25% Similarity=0.349 Sum_probs=325.3
Q ss_pred CCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCc
Q 007873 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (586)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (586)
++|||++|+.+++| ...||++.++.+|+++|+++||+|+|+++.++...+.. ...+.+-......+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 37999999999888 46899999999999999999999999999865544321 11111122344556666678999
Q ss_pred eEEEEcCccccccccCCCCCcccCCCCCCCCcch-hHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccch
Q 007873 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (586)
Q Consensus 163 ~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~ 241 (586)
+++.++. .++.+ ..+|+. +.++ ..++..+...+.+.++.+-. ..++|| |||+|+|..++
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~D-ii~~~~~~~~~ 135 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLR-------EEPLPD-VVHFHDWHTVF 135 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTT-------TSCCCS-EEEEESGGGHH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhc-------cCCCCe-EEEecchhhhh
Confidence 9999987 44443 244432 5566 67777788888888877610 013699 99999999888
Q ss_pred HHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEE
Q 007873 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (586)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 321 (586)
++.++++. .++|+|+++|+...... +..+.. .....+........+++..++.+|.++
T Consensus 136 ~~~~~~~~-------~~~~~v~~~h~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ad~ii 193 (439)
T 3fro_A 136 AGALIKKY-------FKIPAVFTIHRLNKSKL-----------PAFYFH----EAGLSELAPYPDIDPEHTGGYIADIVT 193 (439)
T ss_dssp HHHHHHHH-------HCCCEEEEESCCCCCCE-----------EHHHHH----HTTCGGGCCSSEECHHHHHHHHCSEEE
T ss_pred hHHHHhhc-------cCCCEEEEecccccccC-----------chHHhC----ccccccccccceeeHhhhhhhhccEEE
Confidence 88887755 48999999998764221 111100 000000001123366788899999999
Q ss_pred EeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCC
Q 007873 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (586)
Q Consensus 322 tvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 401 (586)
++|+.+++.... .++++ ..++.+||||+|.+.|.|.... ..+...+..+++++|++. +
T Consensus 194 ~~S~~~~~~~~~--~~~~~------~~~i~vi~ngvd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~ 251 (439)
T 3fro_A 194 TVSRGYLIDEWG--FFRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDE--G 251 (439)
T ss_dssp ESCHHHHHHTHH--HHGGG------TTSEEECCCCCCTTTSCGGGSC------------SCHHHHHHHHHHHHTCCS--C
T ss_pred ecCHHHHHHHhh--hhhhc------CCceeecCCCCCchhcCccccc------------chhhhhHHHHHHHcCCCC--C
Confidence 999999888442 11222 3499999999999998775311 234556888999999963 3
Q ss_pred CcEEEEEecCc-cccCHHHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 402 IPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 402 ~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~----~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
++|+|+||+. ++||++.+++|++.+.+ ++++|+|+|+|+..+.+.++++..++++.+.+.+..+.+++..+|+.
T Consensus 252 -~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 -VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp -EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT
T ss_pred -cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHH
Confidence 8999999999 99999999999999977 69999999999977779999999998844445555788899999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHH-hcCH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGT 555 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~ 555 (586)
||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ +++|+++++++|.++++ + +
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~--~ 397 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS--R 397 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--T
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--H
Confidence 999999999999999999999999999999999999999987 99998 99999999999999999 6 6
Q ss_pred HHHHHHHHHHHH--hcCCHHHHHHHHHHHhc
Q 007873 556 QALAEMMKNGMA--QDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 556 ~~~~~~~~~~~~--~~fsw~~~a~~~~~~~~ 584 (586)
+.++++++++.+ ++|||+.++++|++.+.
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 428 (439)
T 3fro_A 398 SDLSKFRENCKKRAMSFSWEKSAERYVKAYT 428 (439)
T ss_dssp TTTHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 778888888854 78999999999998654
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=362.89 Aligned_cols=396 Identities=18% Similarity=0.251 Sum_probs=280.0
Q ss_pred CCCceeeecCCCceEEEEeccccCcc-----ccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCC
Q 007873 73 NGPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147 (586)
Q Consensus 73 ~~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~ 147 (586)
+++.+....++.|||++|+..|+|.. ..||.+.++.+|+++|+++||+|+++++........
T Consensus 9 ~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------- 75 (438)
T 3c48_A 9 HHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE------------- 75 (438)
T ss_dssp ----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS-------------
T ss_pred ccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc-------------
Confidence 33444455566799999999888832 369999999999999999999999999864211110
Q ss_pred eeeEEEEEEEEeCCceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHH-hHhhcccCCCCCCCCC
Q 007873 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPY 226 (586)
Q Consensus 148 ~~~~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~ 226 (586)
.....+|+.++.++...+... . ..+....+..+...+++. ++...
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~----------- 121 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREKV----------- 121 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHTC-----------
T ss_pred -------cccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhccC-----------
Confidence 011235677776643221100 0 000011111233333333 33221
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+|| |||+|.|..++++..+.+. .++|+|+++|+........ +.....+. ....
T Consensus 122 ~~D-iv~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~---~~~~~~~~----------------~~~~ 174 (438)
T 3c48_A 122 TYD-LIHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY---RDDSDTPE----------------SEAR 174 (438)
T ss_dssp CCS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC-------CCHH----------------HHHH
T ss_pred CCC-EEEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc---ccccCCcc----------------hHHH
Confidence 399 9999988766666655554 3889999999864311100 00000000 0011
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHH
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 386 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 386 (586)
..+.+..++.+|.|+++|+..++.+.+ .+|++.+ ++.+||||+|...|.|.... .
T Consensus 175 ~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~g~~~~------k~~vi~ngvd~~~~~~~~~~-----------------~ 229 (438)
T 3c48_A 175 RICEQQLVDNADVLAVNTQEEMQDLMH--HYDADPD------RISVVSPGADVELYSPGNDR-----------------A 229 (438)
T ss_dssp HHHHHHHHHHCSEEEESSHHHHHHHHH--HHCCCGG------GEEECCCCCCTTTSCCC---------------------
T ss_pred HHHHHHHHhcCCEEEEcCHHHHHHHHH--HhCCChh------heEEecCCccccccCCcccc-----------------h
Confidence 223466788999999999999999875 2566544 89999999999988775321 1
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C--CeEEEEEeC----CChhhHHHHHHHHHHCC--
Q 007873 387 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP-- 456 (586)
Q Consensus 387 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~--~v~lvIvG~----g~~~~~~~l~~l~~~~~-- 456 (586)
+..++++++++. +.++|+|+||+.++||++.+++|+..+.+ + +++|+|+|+ |+ ..+.++++..+++
T Consensus 230 ~~~~r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~ 305 (438)
T 3c48_A 230 TERSRRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVE 305 (438)
T ss_dssp CHHHHHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCT
T ss_pred hhhhHHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCC
Confidence 234788889864 45899999999999999999999999975 3 799999998 54 5667777777654
Q ss_pred CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCC
Q 007873 457 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 536 (586)
Q Consensus 457 ~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 536 (586)
+++.+.+..+.+++..+|+.||++|+||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~ 375 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------DG 375 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------SS
T ss_pred CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------CC
Confidence 57888888888889999999999999999999999999999999999999999999999999999998 99
Q ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 537 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 537 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.|+++++++|.+++++ ++.+++|++++. .++|||+.++++|++.+
T Consensus 376 ~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 422 (438)
T 3c48_A 376 HSPHAWADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQLSSLY 422 (438)
T ss_dssp CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999998 888889988874 34499999999998865
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=347.89 Aligned_cols=360 Identities=21% Similarity=0.277 Sum_probs=277.8
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCcc-ccCCcceEEEEEeCCeeeEEEEEEEEeC
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (586)
|++|||++++..|+|. .||.+.++.+|+++| +||+|+|+++...... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 4579999999998886 899999999999999 7999999998754321 1000 012
Q ss_pred CceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccc
Q 007873 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 240 (586)
Q Consensus 161 gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~ 240 (586)
|+.++.++...++.. ..+...+.+.++.. +|| +||+|.....
T Consensus 57 ~~~~~~~~~~~~~~~-------------------------~~~~~~l~~~~~~~------------~~D-vv~~~~~~~~ 98 (394)
T 3okp_A 57 DYEVIRWPRSVMLPT-------------------------PTTAHAMAEIIRER------------EID-NVWFGAAAPL 98 (394)
T ss_dssp SSEEEEESSSSCCSC-------------------------HHHHHHHHHHHHHT------------TCS-EEEESSCTTG
T ss_pred ceEEEEccccccccc-------------------------hhhHHHHHHHHHhc------------CCC-EEEECCcchH
Confidence 455555433211110 02233344444443 599 8888875443
Q ss_pred -hHHHHHHhhccCCCCCCCce-EEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCC
Q 007873 241 -LIPCYLKTMYKPKGMYKSAK-VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 318 (586)
Q Consensus 241 -~~~~~l~~~~~~~~~~~~~p-vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 318 (586)
++...++. .++| +|+++|+....... ......+++..++.+|
T Consensus 99 ~~~~~~~~~--------~~~~~~i~~~h~~~~~~~~----------------------------~~~~~~~~~~~~~~~d 142 (394)
T 3okp_A 99 ALMAGTAKQ--------AGASKVIASTHGHEVGWSM----------------------------LPGSRQSLRKIGTEVD 142 (394)
T ss_dssp GGGHHHHHH--------TTCSEEEEECCSTHHHHTT----------------------------SHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHh--------cCCCcEEEEeccchhhhhh----------------------------cchhhHHHHHHHHhCC
Confidence 33333333 2554 88999975430000 0012344577789999
Q ss_pred EEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCC
Q 007873 319 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (586)
Q Consensus 319 ~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 398 (586)
.++++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. +..+..+++++|++.
T Consensus 143 ~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~~ 196 (394)
T 3okp_A 143 VLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFTD 196 (394)
T ss_dssp EEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCCT
T ss_pred EEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCCc
Confidence 9999999999998852 221 23899999999999888743 223678899999874
Q ss_pred CCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 399 ~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
+.++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++...+..++.+.+..+.+++..+|+.
T Consensus 197 --~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 272 (394)
T 3okp_A 197 --TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAA 272 (394)
T ss_dssp --TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHH
T ss_pred --CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHh
Confidence 34899999999999999999999999866 799999999997 667788877666678999999888999999999
Q ss_pred ccEEEEcCCC-------CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 477 ADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 477 aDi~l~PS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
||++|+||.+ |++|++++|||++|+|||+++.||..|++.++ +|+++ +++|+++++++|.++
T Consensus 273 ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~l 341 (394)
T 3okp_A 273 ADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIEL 341 (394)
T ss_dssp CSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHHH
T ss_pred CCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHHH
Confidence 9999999999 99999999999999999999999999999999 99998 899999999999999
Q ss_pred HHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 550 LATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 550 l~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
+++ ++.++++++++. .++|||+.++++|++.+
T Consensus 342 ~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 376 (394)
T 3okp_A 342 LDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNIL 376 (394)
T ss_dssp HTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHH
T ss_pred HhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 998 888899998884 46799999999999865
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=358.61 Aligned_cols=400 Identities=16% Similarity=0.131 Sum_probs=285.5
Q ss_pred CceEEEEeccccCc---------cccchHHHHhhhhHHHHHhCCCeEEEEEecCCCcc-ccCCcceEEEEEeCCeeeEEE
Q 007873 84 GLNILFVGTEVAPW---------SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (586)
Q Consensus 84 ~MkIl~v~~~~~P~---------~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (586)
.|||++|+..++|. ...||++.++.+|+++|+++||+|+|+++...... ..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------------- 71 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE--------------- 71 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS---------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh---------------
Confidence 59999999988773 13699999999999999999999999998643111 100000
Q ss_pred EEEEE--eCCceEEEEcCccc--cccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCC
Q 007873 154 FFHCH--KRGVDRVFVDHPWF--LAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGED 229 (586)
Q Consensus 154 ~~~~~--~~gv~~~~v~~~~~--~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pD 229 (586)
.... .+|++++.++.... +.+ .. +. ..+..+...+.+.++... .+||
T Consensus 72 -~~~~~~~~gv~v~~~~~~~~~~~~~------~~---------~~---~~~~~~~~~l~~~l~~~~----------~~~D 122 (499)
T 2r60_A 72 -IDYYQETNKVRIVRIPFGGDKFLPK------EE---------LW---PYLHEYVNKIINFYREEG----------KFPQ 122 (499)
T ss_dssp -EEECTTCSSEEEEEECCSCSSCCCG------GG---------CG---GGHHHHHHHHHHHHHHHT----------CCCS
T ss_pred -HHhccCCCCeEEEEecCCCcCCcCH------HH---------HH---HHHHHHHHHHHHHHHhcC----------CCCC
Confidence 0011 24677766643211 000 00 00 011122333444444421 1599
Q ss_pred EEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCC-hhhccccccccCCCCCcCCcchh
Q 007873 230 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKIN 308 (586)
Q Consensus 230 vii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 308 (586)
|||+|.+..++++..+.+. .++|+|+++|+........ +...+.+ ..+...+. +.....
T Consensus 123 -ivh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~ 182 (499)
T 2r60_A 123 -VVTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRII 182 (499)
T ss_dssp -EEEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHH
T ss_pred -EEEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHH
Confidence 9999987766666655554 3899999999865321100 0000000 00000000 000112
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCC-C----cchhhhhccCeeEecCCcccCCcCCCCccccccccCcccccccc
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 383 (586)
+.+..++.+|.|+++|+..++.+.+...+| + +.+ ++.+||||+|...|.|...
T Consensus 183 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~---------------- 240 (499)
T 2r60_A 183 AERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG---------------- 240 (499)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------
Confidence 346678899999999999999887520034 4 333 8999999999998877532
Q ss_pred HHHHHHHHHHhC-----CCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C-CeEEEEEeC--CC-----------h
Q 007873 384 PLLKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK-----------K 442 (586)
Q Consensus 384 ~~~~~~l~~~~g-----l~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~-~v~lvIvG~--g~-----------~ 442 (586)
...+..+++++| ++. +.++|+|+||+.++||++.+++|+..+.+ + .++|+|+|+ |+ .
T Consensus 241 ~~~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~ 318 (499)
T 2r60_A 241 DKIKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEK 318 (499)
T ss_dssp HHHHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHH
T ss_pred hhhHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccch
Confidence 123466788887 654 45899999999999999999999999965 2 468999998 32 1
Q ss_pred hhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccc
Q 007873 443 PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 516 (586)
Q Consensus 443 ~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a----Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 516 (586)
.|.+.++++..+++ +++.+.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.
T Consensus 319 ~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~ 398 (499)
T 2r60_A 319 EILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILD 398 (499)
T ss_dssp HHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTG
T ss_pred HHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhc
Confidence 12678888887765 478888888888999999999 999999999999999999999999999999999999999
Q ss_pred cCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 517 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 517 ~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
++.+|+++ +++|+++|+++|.+++++ ++.++++++++. .++|||+.++++|++.+
T Consensus 399 ~~~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y 456 (499)
T 2r60_A 399 GGKYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVI 456 (499)
T ss_dssp GGTSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred CCceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999998 999999999999999998 888899998884 45699999999998865
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-40 Score=372.71 Aligned_cols=422 Identities=15% Similarity=0.177 Sum_probs=281.0
Q ss_pred CceEEEEecccc---------CccccchHHHHhh--------hhHHHHHhCCCeEE----EEEecCCCccccCCcceEEE
Q 007873 84 GLNILFVGTEVA---------PWSKTGGLGDVLG--------GLPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (586)
Q Consensus 84 ~MkIl~v~~~~~---------P~~~~GG~~~~~~--------~L~~~L~~~Gh~V~----vvt~~~~~~~~~~~~~~~~~ 142 (586)
.|+|++|+...+ |. +||...|+. +|+++|+++||+|+ |+|...+.. ...+.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 689999998876 75 999999998 47777788999886 998875322 1111111111
Q ss_pred EEeCCeeeEEEEEEEEeCCceEEEEcCcc---ccccccCCCCCcccCCCCCCCCcchhHHHHHHH-HHHHHHhHhhcccC
Q 007873 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLNS 218 (586)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~v~~~~---~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 218 (586)
... ..+|+.++.++... +..+ |-. ...++ ... ..|. .++...++...
T Consensus 355 ~i~------------~~~gv~I~RvP~~~~~g~l~~-~l~-k~~L~---------~~L---~~F~~~~l~~il~~~~--- 405 (816)
T 3s28_A 355 RVY------------DSEYCDILRVPFRTEKGIVRK-WIS-RFEVW---------PYL---ETYTEDAAVELSKELN--- 405 (816)
T ss_dssp ECT------------TCSSEEEEEECEEETTEEECS-CCC-TTTCG---------GGH---HHHHHHHHHHHHHHCS---
T ss_pred eec------------CcCCeEEEEecCCCccccccc-ccc-HHHHH---------HHH---HHHHHHHHHHHHHhcC---
Confidence 100 01366666664211 0010 000 01111 111 1233 33333333332
Q ss_pred CCCCCCCCCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCCh-hhccccccccC
Q 007873 219 NKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFIDG 297 (586)
Q Consensus 219 ~~~~~~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~ 297 (586)
.+|| |||+|.|.+++++..+++.. ++|+|+|.|+........ . +... .....+.+
T Consensus 406 -------~~PD-VIHsH~~~sglva~llar~~-------gvP~V~T~Hsl~~~k~~~-~-----~~~~~~~~~~y~~--- 461 (816)
T 3s28_A 406 -------GKPD-LIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYPD-S-----DIYWKKLDDKYHF--- 461 (816)
T ss_dssp -------SCCS-EEEEEHHHHHHHHHHHHHHH-------TCCEEEECSCCHHHHSTT-T-----TTTHHHHHHHHCH---
T ss_pred -------CCCe-EEEeCCchHHHHHHHHHHHc-------CCCEEEEEeccccccccc-c-----cchhhhHHHHHHH---
Confidence 2599 99999999988888887764 899999999875422111 0 0000 00000000
Q ss_pred CCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCc-cCCCc----chh---------hhhccCeeEecCCcccCCcC
Q 007873 298 YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LDN---------IIRKTGIKGIVNGMDVQEWN 363 (586)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~-~~g~~----~~~---------~~~~~~i~vI~ngvd~~~~~ 363 (586)
...+...+..+..||.|+++|+..++.+.... .++.. +.. .. ..++.+||||+|.+.|.
T Consensus 462 ------~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F~ 534 (816)
T 3s28_A 462 ------SCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIYF 534 (816)
T ss_dssp ------HHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTSC
T ss_pred ------HHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHcC
Confidence 00112244578899999999999998643211 11110 000 00 12899999999999998
Q ss_pred CCCccc--cccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeC
Q 007873 364 PLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT 439 (586)
Q Consensus 364 p~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~ 439 (586)
|...+. +..-+... +....++...++.+|+..+++.++|+|+||+.++||++.|++|+.++.+ ++++|+|+|+
T Consensus 535 P~~~~~~Rl~~~~~~i---~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~ 611 (816)
T 3s28_A 535 PYTEEKRRLTKFHSEI---EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGG 611 (816)
T ss_dssp CTTCTTTCCGGGHHHH---HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECC
T ss_pred ccchhhhhhhhccccc---cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeC
Confidence 865321 00000000 0000001123455666445677999999999999999999999999976 6899999999
Q ss_pred CCh---------hhHHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCcE
Q 007873 440 GKK---------PMEKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVP 503 (586)
Q Consensus 440 g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~~l~-~aDi~l~PS~~E~~gl~~lEAma~G~Pv 503 (586)
|+. .+.+.++++..+++ +++.+.+..+ .+++..+++ .||++|+||.+|+||++++|||+||+||
T Consensus 612 g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PV 691 (816)
T 3s28_A 612 DRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 691 (816)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCE
T ss_pred CCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCE
Confidence 882 25667777777766 4777776433 366667777 6899999999999999999999999999
Q ss_pred EEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH----HhcCHHHHHHHHHHHH---HhcCCHHHHH
Q 007873 504 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNGM---AQDLSWKVSI 576 (586)
Q Consensus 504 I~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll----~~~~~~~~~~~~~~~~---~~~fsw~~~a 576 (586)
|+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+++|+++++ .++|||+.++
T Consensus 692 Iasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~a 759 (816)
T 3s28_A 692 FATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIYS 759 (816)
T ss_dssp EEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHHH
T ss_pred EEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999998 9999999999998777 66 788899999985 3889999999
Q ss_pred HHHHHHh
Q 007873 577 GTVQEED 583 (586)
Q Consensus 577 ~~~~~~~ 583 (586)
++|++.+
T Consensus 760 ~~ll~lY 766 (816)
T 3s28_A 760 QRLLTLT 766 (816)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=334.61 Aligned_cols=363 Identities=19% Similarity=0.186 Sum_probs=262.1
Q ss_pred CceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
-|+.-+....| |. .||.+.++.+|+++|+++||+|+++++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 36666666665 43 7999999999999999999999999975321100 0112333
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
+..++.+.+.. +. +. ... ..+...+.+.++.. +|| |||+|.+....+.
T Consensus 67 ~~~~~~~~~~~----------~~------~~--~~~-~~~~~~l~~~l~~~------------~~D-vv~~~~~~~~~~~ 114 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YP--PYD-LALASKMAEVAQRE------------NLD-ILHVHYAIPHAIC 114 (394)
T ss_dssp EECCCCC--------------CC------SC--CHH-HHHHHHHHHHHHHH------------TCS-EEEECSSTTHHHH
T ss_pred EEecccccccc----------cc------cc--ccc-HHHHHHHHHHHHHc------------CCC-EEEEcchhHHHHH
Confidence 33232211100 00 00 001 11223344444443 599 9999976543333
Q ss_pred HH-HHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEE
Q 007873 244 CY-LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 322 (586)
Q Consensus 244 ~~-l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vit 322 (586)
.+ .+.... .++|+|+++|+.... . .+. ......+++..++.+|.+++
T Consensus 115 ~~~~~~~~~-----~~~p~v~~~h~~~~~-~--------~~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 115 AYLAKQMIG-----ERIKIVTTLHGTDIT-V--------LGS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHTT-----TCSEEEEECCHHHHH-T--------TTT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHhhc-----CCCCEEEEEecCccc-c--------cCC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 33 333321 268999999974320 0 000 00122455677889999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+|+..++.+.+. ++. ..++.+||||+|...|.|.. +..++++++++. +.
T Consensus 163 ~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-------NKDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SE 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-------SSCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-------cccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CC
Confidence 999999998852 222 23899999999999887753 345678888864 44
Q ss_pred cEEEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
++|+|+||+.++||++.+++|+..+.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+. .+++..+|+.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999988 5667777777665 45666653 3556789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ +++|+++++++|.+++++ ++.++
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999998 999999999999999998 88888
Q ss_pred HHHHHHH---HhcCCHHHHHHHHHHHh
Q 007873 560 EMMKNGM---AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 560 ~~~~~~~---~~~fsw~~~a~~~~~~~ 583 (586)
+|++++. .++|||+.++++|++.+
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~ 382 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIY 382 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9998885 38899999999999865
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=331.14 Aligned_cols=359 Identities=14% Similarity=0.092 Sum_probs=256.1
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCc-cccCCcceEEEEEeCCeeeEEEEEEEEeC
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQY-KDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (586)
|++|||++++.. + ..||.+.++.+|+++|+++||+|.+++...... .+.. +
T Consensus 38 ~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~------------------------~ 89 (416)
T 2x6q_A 38 LKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVT------------------------K 89 (416)
T ss_dssp TTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHH------------------------H
T ss_pred hhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhh------------------------c
Confidence 567999999986 3 279999999999999999999999998653210 0000 0
Q ss_pred CceEEEEcCccccccccCCCCCcccCCCCCCCCcchhH-HHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCcc
Q 007873 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 239 (586)
Q Consensus 161 gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~ 239 (586)
++. ..+. +...+. +..... .+..+...+.+.++. .+|| |||+|++..
T Consensus 90 ~~~-------~~~~------~~~~~~------~~~~~~~~~~~~~~~~~~~l~~------------~~~D-vv~~~~~~~ 137 (416)
T 2x6q_A 90 TFH-------NALQ------GNESLK------LTEEMKELYLNVNRENSKFIDL------------SSFD-YVLVHDPQP 137 (416)
T ss_dssp HHH-------HHHT------TCCSCC------CCHHHHHHHHHHHHHHHHSSCG------------GGSS-EEEEESSTT
T ss_pred ccc-------eeec------cccccc------ccHHHHHHHHHHHHHHHHHHhh------------cCCC-EEEEeccch
Confidence 000 0000 000000 111111 111122222222222 2599 999998765
Q ss_pred chHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCE
Q 007873 240 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 319 (586)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 319 (586)
..+..+++ ..+|+|+++|+..... ......+++..+..+|.
T Consensus 138 ~~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 178 (416)
T 2x6q_A 138 AALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDR 178 (416)
T ss_dssp GGGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSE
T ss_pred hhHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCE
Confidence 44322211 2489999999743210 00123455666778887
Q ss_pred EE-EeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCC
Q 007873 320 VL-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 398 (586)
Q Consensus 320 vi-tvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 398 (586)
++ ++|+..++.+ + ..++.+||||+|...+.+.. ..+..+..++++++++.
T Consensus 179 ~i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~---------------~~~~~~~~~r~~~~~~~ 229 (416)
T 2x6q_A 179 YIFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVE---------------LKQTEILRILERFDVDP 229 (416)
T ss_dssp EEESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSC---------------CCHHHHHHHHHHTTCCT
T ss_pred EEEechHHHHhhC--------C------ccceEEeCCCCChhhhcccc---------------cChhhHHHHHHHhCCCC
Confidence 76 5565443321 1 23899999999987765432 11234667889999874
Q ss_pred CCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHHCC--CceEEEeccC---hH
Q 007873 399 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKFN---IP 468 (586)
Q Consensus 399 ~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~~---~~ 468 (586)
+.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+. .+.+.++++..+++ +++.+.+.++ .+
T Consensus 230 --~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 230 --EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp --TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred --CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHH
Confidence 44899999999999999999999999976 6999999999962 34556667666544 4788887553 56
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 469 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 469 ~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
++..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.+
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~ 375 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLY 375 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999997 4 99999999999
Q ss_pred HHHhcCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHhc
Q 007873 549 ALATYGTQALAEMMKNGM---AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 549 ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~~~ 584 (586)
++++ ++.+++|++++. .++|||+.++++|++.+.
T Consensus 376 ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 376 LLKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILN 412 (416)
T ss_dssp HHHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred HHhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 9998 888899999884 468999999999998653
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=334.44 Aligned_cols=358 Identities=16% Similarity=0.162 Sum_probs=256.5
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++++..++| .||.+.++.+|+++|+++||+|+++++...... .+|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--------------------------~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC--------------------------PKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------CTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------CCCcEE
Confidence 899999998777 599999999999999999999999997632100 125555
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.++.+.+. +..++..+...+.+.++.. +|| +||+|.+..+....
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~------------~~D-vv~~~~~~~~~~~~ 96 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH------------PAD-RVVGFNKMPGLDVY 96 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS------------CCS-EEEESSCCTTCSEE
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc------------CCC-EEEEecCCCCceee
Confidence 555322111 1112223333444444433 599 89998754332110
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhh--cCCEEEE
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVLT 322 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~vit 322 (586)
+... ...++.+.+.|+.... ....+ .....+.+..+. .+|.+++
T Consensus 97 ~~~~-------~~~~~~~~~~~~~~~~------------~~~~~---------------~~~~~~~~~~~~~~~~d~ii~ 142 (374)
T 2iw1_A 97 FAAD-------VCYAEKVAQEKGFLYR------------LTSRY---------------RHYAAFERATFEQGKSTKLMM 142 (374)
T ss_dssp ECCS-------CCHHHHHHHHCCHHHH------------TSHHH---------------HHHHHHHHHHHSTTCCCEEEE
T ss_pred eccc-------cccceeeeecccchhh------------hcHHH---------------HHHHHHHHHHhhccCCcEEEE
Confidence 0000 0122223223321110 00000 001112233333 6999999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+|+..++.+.+ .+|++.+ ++.+||||+|...|.|... ...+..+++++|++. +.
T Consensus 143 ~s~~~~~~~~~--~~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~ 196 (374)
T 2iw1_A 143 LTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKE--QQ 196 (374)
T ss_dssp SCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCT--TC
T ss_pred cCHHHHHHHHH--HhCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCC--CC
Confidence 99999999885 2465544 8999999999988876432 123567889999875 44
Q ss_pred cEEEEEecCccccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~---~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a 477 (586)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. .+++..+|+.|
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 271 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA 271 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHhc
Confidence 899999999999999999999999965 4899999999873 44555555543 46887774 34577899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCC-CCCHHHHHHHHHHHHHhcCHH
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGTQ 556 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~-~~d~~~la~~I~~ll~~~~~~ 556 (586)
|++++||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ ++
T Consensus 272 d~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~~ 339 (374)
T 2iw1_A 272 DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--SP 339 (374)
T ss_dssp SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--HH
T ss_pred CEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--hH
Confidence 99999999999999999999999999999999999999999999998 7 88999999999999998 88
Q ss_pred HHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 557 ALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 557 ~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.++++++++. .++++|+..++++.+..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 368 (374)
T 2iw1_A 340 LRMAWAENARHYADTQDLYSLPEKAADII 368 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8999999885 46788888888887754
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=325.62 Aligned_cols=357 Identities=18% Similarity=0.199 Sum_probs=260.7
Q ss_pred CCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCC
Q 007873 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (586)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (586)
.+.|||+|++..++|. .||.+.++..|+++|+++||+|.++++...... ..... ...|
T Consensus 18 ~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~------------------~~~~ 75 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYV------------------VSGG 75 (406)
T ss_dssp ---CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTE------------------EECC
T ss_pred CCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCccc------------------ccCC
Confidence 3469999999876553 699999999999999999999999998743220 00000 0011
Q ss_pred ceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccch
Q 007873 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 241 (586)
Q Consensus 162 v~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~ 241 (586)
.++.++...... .+. +. ..+...+.+.++.. +|| +||+|.+....
T Consensus 76 -~~~~~~~~~~~~--------~~~-------~~------~~~~~~l~~~l~~~------------~~D-ii~~~~~~~~~ 120 (406)
T 2gek_A 76 -KAVPIPYNGSVA--------RLR-------FG------PATHRKVKKWIAEG------------DFD-VLHIHEPNAPS 120 (406)
T ss_dssp -CCC---------------------------CC------HHHHHHHHHHHHHH------------CCS-EEEEECCCSSS
T ss_pred -cEEeccccCCcc--------ccc-------cc------HHHHHHHHHHHHhc------------CCC-EEEECCccchH
Confidence 111111000000 000 10 01223333444443 599 88888876655
Q ss_pred HHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEE
Q 007873 242 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 321 (586)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 321 (586)
+...+.+. .++|+|+++|+...... +. .....+++..++.+|.++
T Consensus 121 ~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~--------------~~~~~~~~~~~~~~d~ii 165 (406)
T 2gek_A 121 LSMLALQA-------AEGPIVATFHTSTTKSL--------------TL--------------SVFQGILRPYHEKIIGRI 165 (406)
T ss_dssp HHHHHHHH-------EESSEEEEECCCCCSHH--------------HH--------------HHHHSTTHHHHTTCSEEE
T ss_pred HHHHHHHh-------cCCCEEEEEcCcchhhh--------------hH--------------HHHHHHHHHHHhhCCEEE
Confidence 55444443 37899999997533110 00 011233346788999999
Q ss_pred EeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCC
Q 007873 322 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 401 (586)
Q Consensus 322 tvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 401 (586)
++|+..++.+.+. ++ ..++ +||||+|...|.+.... .+++ ++
T Consensus 166 ~~s~~~~~~~~~~--~~--------~~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~--~~ 207 (406)
T 2gek_A 166 AVSDLARRWQMEA--LG--------SDAV-EIPNGVDVASFADAPLL-------------------------DGYP--RE 207 (406)
T ss_dssp ESSHHHHHHHHHH--HS--------SCEE-ECCCCBCHHHHHTCCCC-------------------------TTCS--CS
T ss_pred ECCHHHHHHHHHh--cC--------CCcE-EecCCCChhhcCCCchh-------------------------hhcc--CC
Confidence 9999999988741 22 2378 99999998877654321 1122 13
Q ss_pred CcEEEEEecC-ccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 402 IPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 402 ~~~i~~iGrl-~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
.++|+|+||+ .+.||++.+++|+..+.+ ++++|+|+|+|+. +.++++..++.+++.+.+..+.+++..+|+.||
T Consensus 208 ~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 284 (406)
T 2gek_A 208 GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMRSAD 284 (406)
T ss_dssp SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSS
T ss_pred CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCC
Confidence 4799999999 999999999999999976 6899999999983 667777666556798888888888999999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHH
Q 007873 479 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 557 (586)
Q Consensus 479 i~l~PS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~ 557 (586)
++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ +++|+++++++|.+++++ ++.
T Consensus 285 v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~ 352 (406)
T 2gek_A 285 VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED--DQL 352 (406)
T ss_dssp EEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--HHH
T ss_pred EEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--HHH
Confidence 9999996 899999999999999999999999999999999999997 999999999999999998 888
Q ss_pred HHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 558 LAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 558 ~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
+.++++++. .+.|||+.++++|++.+
T Consensus 353 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 380 (406)
T 2gek_A 353 RAGYVARASERVHRYDWSVVSAQIMRVY 380 (406)
T ss_dssp HHHHHHHHHHHGGGGBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 888988874 35999999999998864
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-37 Score=325.38 Aligned_cols=351 Identities=14% Similarity=0.125 Sum_probs=255.9
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||+|++..+ |. .||.+.++..|+++|+++ |+|++++........ .. ....
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~-~~------------------------~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV-HA------------------------NIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS-CS------------------------SSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc-cc------------------------cccc
Confidence 9999999864 54 799999999999999999 999999976321000 00 0000
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.. . .... ...+.+.. + ....+.+.++.. +|| |||+|.|...+.+.
T Consensus 52 ~~~--~-~~~~------~~~~~~~~---~---------~~~~l~~~l~~~------------~~D-iv~~~~~~~~~~~~ 97 (413)
T 3oy2_A 52 FDA--Q-TAEH------VRGLNEQG---F---------YYSGLSEFIDVH------------KPD-IVMIYNDPIVIGNY 97 (413)
T ss_dssp EEH--H-HHHH------HTTCCSTT---C---------CHHHHHHHHHHH------------CCS-EEEEEECHHHHHHH
T ss_pred CCc--c-cccc------cccccccc---c---------hHHHHHHHHHhc------------CCC-EEEEcchHHHHHHH
Confidence 000 0 0000 00110000 0 011122223332 599 99999666554433
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCC--EEEE
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVLT 322 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vit 322 (586)
..... + +....+++...|+..... ...++..++.+| .+++
T Consensus 98 ~~~~~-~---~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~ii~ 139 (413)
T 3oy2_A 98 LLAMG-K---CSHRTKIVLYVDLVSKNI----------------------------------RENLWWIFSHPKVVGVMA 139 (413)
T ss_dssp HHHGG-G---CCSCCEEEEEECCCSBSC----------------------------------CGGGGGGGGCTTEEEEEE
T ss_pred HHHhc-c---CCCCCceeeeccccchhh----------------------------------HHHHHHHHhccCCceEEE
Confidence 33322 1 112356666666533200 011355678888 9999
Q ss_pred eCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 323 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 323 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+|+..++.+.+ +|++ .++.+||||+|...|. ..+++++++.+++.
T Consensus 140 ~S~~~~~~~~~---~~~~-------~~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~~ 184 (413)
T 3oy2_A 140 MSKCWISDICN---YGCK-------VPINIVSHFVDTKTIY-------------------------DARKLVGLSEYNDD 184 (413)
T ss_dssp SSTHHHHHHHH---TTCC-------SCEEECCCCCCCCCCT-------------------------THHHHTTCGGGTTS
T ss_pred cCHHHHHHHHH---cCCC-------CceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccCc
Confidence 99999999986 5542 2899999999988771 13567787754456
Q ss_pred cEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHHCC--Cc-------eEEEeccCh
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFNI 467 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~----~~~~l~~l~~~~~--~~-------v~~~~~~~~ 467 (586)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+.. +++.++++..+++ ++ +.+.+..+.
T Consensus 185 ~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~ 264 (413)
T 3oy2_A 185 VLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTD 264 (413)
T ss_dssp EEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCH
T ss_pred eEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCH
Confidence 899999999999999999999999865 78999999998742 3477777776654 23 555566688
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcc---------------eE--EEcccccc
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSVD 530 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~---------------G~--~~~~~~~~ 530 (586)
+++..+|+.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+ |+ ++
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~------ 338 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE------ 338 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE------
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee------
Confidence 89999999999999999999999999999999999999999999999999887 88 88
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHH---hcCCHHHHHHHHHHHhc
Q 007873 531 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMA---QDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 531 ~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~~~ 584 (586)
++.|+++|+++| +++++ ++.+++|++++.+ ++|||+.++++|++.+.
T Consensus 339 ----~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 339 ----GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp ----EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 899999999999 99998 8888999998853 78999999999998653
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=319.44 Aligned_cols=309 Identities=15% Similarity=0.110 Sum_probs=239.5
Q ss_pred CCCceEEEEecc--------c---cCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeee
Q 007873 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (586)
Q Consensus 82 ~~~MkIl~v~~~--------~---~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (586)
|+.|||++++.. + +|. ..||.+.++.+|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~-~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQ-GYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCS-SSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCcc-cCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 567999999998 3 442 46999999999999999999999999986322110
Q ss_pred EEEEEEEEeCCceEEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCE
Q 007873 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 230 (586)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDv 230 (586)
+++.++ ..+ .. ..+.+.++.. +||
T Consensus 63 ---------~~~~~~--~~~-------------------------~~-------~~l~~~l~~~------------~~D- 86 (342)
T 2iuy_A 63 ---------PGLTVV--PAG-------------------------EP-------EEIERWLRTA------------DVD- 86 (342)
T ss_dssp ---------TTEEEC--SCC-------------------------SH-------HHHHHHHHHC------------CCS-
T ss_pred ---------Ccceec--cCC-------------------------cH-------HHHHHHHHhc------------CCC-
Confidence 122211 000 00 0222333332 599
Q ss_pred EEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhh
Q 007873 231 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 310 (586)
Q Consensus 231 ii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (586)
|||+|.+...... .. ..++| |+++|+.....
T Consensus 87 vi~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~-------------------------------------- 117 (342)
T 2iuy_A 87 VVHDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP-------------------------------------- 117 (342)
T ss_dssp EEEECSSSSSCST---TC-------CTTCE-EEEEECSSSBC--------------------------------------
T ss_pred EEEECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc--------------------------------------
Confidence 9999987654332 11 25889 99999754300
Q ss_pred hHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHH
Q 007873 311 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (586)
Q Consensus 311 ~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (586)
..+|.++++|+..++.+.+ ..++.+||||+|...|.|...
T Consensus 118 ----~~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~----------------------- 157 (342)
T 2iuy_A 118 ----VNPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD----------------------- 157 (342)
T ss_dssp ----SCCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT-----------------------
T ss_pred ----ccceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc-----------------------
Confidence 0199999999999998774 128999999999988876532
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHH
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (586)
.. ++.++|+|+||+.++||++.+++|++.+ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+++
T Consensus 158 ----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l 225 (342)
T 2iuy_A 158 ----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERR 225 (342)
T ss_dssp ----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHH
T ss_pred ----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHH
Confidence 01 2346899999999999999999999998 89999999997 566777777776678999888899889
Q ss_pred HHHHHhccEEEEcCC----------CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEccccccccCCCCCC
Q 007873 471 HMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVD 538 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~~~v~~~d 538 (586)
..+|+.||++++||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++ |
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d 294 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-A 294 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-C
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-C
Confidence 999999999999999 79999999999999999999999999999999 9999987 88 9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 007873 539 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 539 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~ 583 (586)
+++++++|.++++ .+.+++...++|||+.++++|++.+
T Consensus 295 ~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~ 332 (342)
T 2iuy_A 295 PDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQY 332 (342)
T ss_dssp HHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999999999876 1122222458899999999998865
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=333.90 Aligned_cols=437 Identities=16% Similarity=0.165 Sum_probs=290.1
Q ss_pred EEeccccCccccchHHHHhhhhHHHHHhC-CCeEEEEEecCCCccc----cCC-cceE--------EE---EEeCCeeeE
Q 007873 89 FVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWD-TDVV--------IE---LKVGDKIEK 151 (586)
Q Consensus 89 ~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vvt~~~~~~~~----~~~-~~~~--------~~---~~~~~~~~~ 151 (586)
=++.++.- +.||+-+++..-|+.+.+. |-+..++.|....... ..+ .... .. .....+--.
T Consensus 32 E~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 109 (725)
T 3nb0_A 32 ETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRGVH 109 (725)
T ss_dssp EEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTCC
T ss_pred eeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCCCe
Confidence 35666654 7999999999988887755 8899999985321111 000 0000 00 000111234
Q ss_pred EEEEEEEeCCceEEEE-cCccccc-------cccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCC
Q 007873 152 VRFFHCHKRGVDRVFV-DHPWFLA-------KVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS 223 (586)
Q Consensus 152 ~~~~~~~~~gv~~~~v-~~~~~~~-------~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 223 (586)
+++.+..++|.+++.+ +...++. ..|...| +-++..+. +.+...+|.+++.++++.+..+.
T Consensus 110 v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~--i~s~~~yg-~~dd~~~F~y~~~avl~~l~~~~-------- 178 (725)
T 3nb0_A 110 FVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVG--IPSPENDF-ETNDAILLGYTVAWFLGEVAHLD-------- 178 (725)
T ss_dssp EEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHC--CCCCSSCH-HHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred EEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhC--cCCCCccc-chhHHHHHHHHHHHHHHHHHhcC--------
Confidence 6777888889886644 5443333 3564333 22222222 44577899999999999887654
Q ss_pred CCCCCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCcc------ccccCc-ccccccCCChhhcccccccc
Q 007873 224 GPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAF-EDFGLLNLPAQFKSSFDFID 296 (586)
Q Consensus 224 ~~~~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~------~~~~~~-~~~~~~~l~~~~~~~~~~~~ 296 (586)
.+.|| |+|+|||++++++.+++..+ .++|+|||+|+..+ |+.+.. ..+..++++.....
T Consensus 179 -~~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------ 244 (725)
T 3nb0_A 179 -SQHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------ 244 (725)
T ss_dssp -CSEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH------
T ss_pred -CCCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh------
Confidence 23589 99999999999999999764 69999999999853 232221 11222232222110
Q ss_pred CCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCc
Q 007873 297 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 376 (586)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 376 (586)
.-.....++++.++..||.|+|||+.+++++.. .++.+.+ .+||||+|+..|+|...
T Consensus 245 ----~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~--Ll~r~~d--------~iIpNGID~~~f~p~~~--------- 301 (725)
T 3nb0_A 245 ----FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH--LLKRKPD--------GILPNGLNVIKFQAFHE--------- 301 (725)
T ss_dssp ----TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH--HTSSCCS--------EECCCCBCCCCCSSTTH---------
T ss_pred ----hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH--HhcCCCC--------EEEcCCccccccCcchh---------
Confidence 001125688899999999999999999999985 2343322 33999999999998631
Q ss_pred cccccccHHHHHHHHHHh------CCCCC-CCCcEEEEEecCc-cccCHHHHHHHHhhccc---------CCeEEEEEeC
Q 007873 377 STVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVLGT 439 (586)
Q Consensus 377 ~~~~~~~~~~~~~l~~~~------gl~~~-~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~---------~~v~lvIvG~ 439 (586)
....+...|..+++.+ |++.+ ++.++|+.+||++ ++||+|.+++|+.+|.. .-+.|+|+..
T Consensus 302 --~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~ 379 (725)
T 3nb0_A 302 --FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPA 379 (725)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCC
T ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCC
Confidence 0123445566666554 44443 3445666689999 79999999999999863 1377888887
Q ss_pred CChhh--------------HHHHH-----------HHH------------------------------------------
Q 007873 440 GKKPM--------------EKQLE-----------QLE------------------------------------------ 452 (586)
Q Consensus 440 g~~~~--------------~~~l~-----------~l~------------------------------------------ 452 (586)
+...+ .+.+. +..
T Consensus 380 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~l 459 (725)
T 3nb0_A 380 KNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQL 459 (725)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCC
T ss_pred CCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCC
Confidence 63211 00000 000
Q ss_pred --------------------HHC--C----C--ceEEEeccChH-------HHHHHHHhccEEEEcCCCCCCcHHHHHHH
Q 007873 453 --------------------ILY--P----E--KARGVAKFNIP-------LAHMIIAGADFILIPSRFEPCGLIQLHAM 497 (586)
Q Consensus 453 --------------------~~~--~----~--~v~~~~~~~~~-------~~~~~l~~aDi~l~PS~~E~~gl~~lEAm 497 (586)
.++ . + ++.++..|... ....++++||++|+||++|+||++++|||
T Consensus 460 pp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAm 539 (725)
T 3nb0_A 460 PPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECT 539 (725)
T ss_dssp CCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHH
T ss_pred CCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHH
Confidence 000 0 1 25666666322 36789999999999999999999999999
Q ss_pred HcCCcEEEcCCcCcccccccC-------cceEEEccccccccCCCCCCHHHHHHHHHHHHHhc---CHHHHHHHHHHH--
Q 007873 498 RYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG-- 565 (586)
Q Consensus 498 a~G~PvI~s~~gg~~e~v~~g-------~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~---~~~~~~~~~~~~-- 565 (586)
|||+|||+|++||+.|++.++ .+|+++- .-++.|+++++++|.+++..+ .+..+.+|++++
T Consensus 540 A~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~-------~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~ 612 (725)
T 3nb0_A 540 VMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIV-------DRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEA 612 (725)
T ss_dssp HTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEE-------CCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCCCChhhhhhccccccCCCCceEEEe-------CCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999876 4798760 013457777777777777531 256677888877
Q ss_pred HHhcCCHHHHHHHHHHHhc
Q 007873 566 MAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 566 ~~~~fsw~~~a~~~~~~~~ 584 (586)
++++|||+.++++|++.+.
T Consensus 613 ~A~~FSWe~iA~~Yl~~Ye 631 (725)
T 3nb0_A 613 LSDLLDWKRMGLEYVKARQ 631 (725)
T ss_dssp GGGGGBHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4689999999999998764
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=298.96 Aligned_cols=351 Identities=12% Similarity=0.093 Sum_probs=227.8
Q ss_pred ecCCCceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEe
Q 007873 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159 (586)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (586)
....+|||++++..|+|....||.. .+.+|+++|+++||+|+|+++......... . ..
T Consensus 42 ~~~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~-------~--------------~~ 99 (413)
T 2x0d_A 42 SSIKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL-------Q--------------SF 99 (413)
T ss_dssp CCCCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH-------G--------------GG
T ss_pred CCCCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH-------H--------------hh
Confidence 3467899999999998842346665 688999999999999999998632100000 0 00
Q ss_pred CCceEEEEcCc-cccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCc
Q 007873 160 RGVDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 238 (586)
Q Consensus 160 ~gv~~~~v~~~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~ 238 (586)
.+.....+..+ .+..+ +.. +.. . ....+.. .++| +||+|.|.
T Consensus 100 ~~~~~~~~~~~~~~~~~--------i~~------~~~----------~---~~~~~~~---------~~~D-vv~a~~~~ 142 (413)
T 2x0d_A 100 KSFKYVMPEEDKDFALQ--------IVP------FND----------R---YNRTIPV---------AKHD-IFIATAWW 142 (413)
T ss_dssp TTSEECCTTCCCCCSEE--------EEE------CSC----------C---TTCCEEE---------CTTE-EEEECSHH
T ss_pred hccceeeccCCccccce--------eee------ccc----------c---ccccccC---------CCCC-EEEEehHH
Confidence 01100000000 00000 000 000 0 0000000 1489 88999987
Q ss_pred cchHHHHHH----hhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHh
Q 007873 239 TSLIPCYLK----TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 314 (586)
Q Consensus 239 ~~~~~~~l~----~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (586)
++.....+. ..+. ....|.++.+|+.... +. . ......+.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~--~~-------~-------------------~~~~~~~~~~~~ 190 (413)
T 2x0d_A 143 TAYAAQRIVSWQSDTYG----IPPNKILYIIQDFEPG--FY-------Q-------------------WSSQYVLAESTY 190 (413)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCCCEEEEECSCGGG--GS-------C-------------------SSHHHHHHHHTT
T ss_pred HHHHHHHhhhhhhhhcc----cccCcEEEEEeechhh--cC-------c-------------------cChHHHHHHHHh
Confidence 766554431 1110 0256788888865421 00 0 000112233445
Q ss_pred hcCC--EEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 315 LESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 315 ~~ad--~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
..++ .++++|+..++.+.+ +|++.+ ++.+|+||+|.+.|.+...
T Consensus 191 ~~~~~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~~------------------------- 236 (413)
T 2x0d_A 191 KYRGPQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIND------------------------- 236 (413)
T ss_dssp SCCSCEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTTS-------------------------
T ss_pred ccCCceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhccccc-------------------------
Confidence 5554 589999999999986 344322 6889999999775543210
Q ss_pred HhCCCCCCCCcEEEEEecC-ccccCHHHHHHHHhhccc--C---CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccC
Q 007873 393 EVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 466 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl-~~~KG~d~Ll~A~~~l~~--~---~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 466 (586)
..++.+.|+++||+ .+.||++.|++|++.+.+ + +++|+|+|+|... .++ ....++.+.+..+
T Consensus 237 -----~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~ 304 (413)
T 2x0d_A 237 -----KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLT 304 (413)
T ss_dssp -----CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCC
T ss_pred -----ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCC
Confidence 11234689999996 689999999999999865 4 3899999998742 111 1234688888888
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 467 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
.+++..+|+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++|+++|
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai 373 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETL 373 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999995 56788999999999998 999999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 007873 547 RRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
.+++++ ++.+++ .....++.|||+...+++.-
T Consensus 374 ~~ll~~--~~~~~~-~~~~~~~~~~W~~~~~~~~~ 405 (413)
T 2x0d_A 374 VELCMS--FNNRDV-DKKESSNMMFYINEFNEFSF 405 (413)
T ss_dssp HHHHHH--TC--------CCBSCGGGCCCC---TT
T ss_pred HHHHcC--HHHHHH-hHHHHHHhCCHHHHHHHHHH
Confidence 999998 444444 21123478999998776443
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=262.08 Aligned_cols=334 Identities=15% Similarity=0.008 Sum_probs=226.7
Q ss_pred CceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCce
Q 007873 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (586)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (586)
.|||++++. + .||....+..|+++|+++||+|.++++......... ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 389999973 2 588888899999999999999999998632111100 012455
Q ss_pred EEEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHH
Q 007873 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 243 (586)
Q Consensus 164 ~~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~ 243 (586)
++.++.+.+... .... ......++......+.+.++.. +|| +||+|.....+..
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~------------~pD-vv~~~~~~~~~~~ 111 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY------------KPD-VVLGMGGYVSGPG 111 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH------------CCS-EEEECSSTTHHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc------------CCC-EEEEeCCcCchHH
Confidence 544432211100 0000 0001111111223333444433 599 8888865433333
Q ss_pred HHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEe
Q 007873 244 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 323 (586)
Q Consensus 244 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitv 323 (586)
..+.+. .++|++++.|+... + ...+...+.+|.+++.
T Consensus 112 ~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 112 GLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEES
T ss_pred HHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEec
Confidence 333333 48999999996421 0 0112235679999988
Q ss_pred CHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCc
Q 007873 324 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 403 (586)
Q Consensus 324 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 403 (586)
++.. ++ ++.+|+||+|...+.+.. .+++++++. +.+
T Consensus 149 ~~~~-----------~~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (364)
T 1f0k_A 149 FPGA-----------FP--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPV 184 (364)
T ss_dssp STTS-----------SS--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSE
T ss_pred Chhh-----------cC--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCc
Confidence 7643 11 577999999987665432 134566653 335
Q ss_pred E-EEEEecCccccCHHHHHHHHhhcccCCeE-EEEEeCCChhhHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhccEE
Q 007873 404 V-IGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 404 ~-i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~-lvIvG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
+ +++.|++.++||.+.+++|+..+.+ +++ ++++|+|+ . +.++++..+++ .++.+.+.. +++..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 4 4555799999999999999999966 788 56789887 2 55666666655 367777655 4567899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcc--------cccccCcceEEEccccccccCCCCCC--HHHHHHHHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 550 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~I~~ll 550 (586)
|+||. |++++|||+||+|||+++.+|.. +++.++ .|+++ +++| +++|+++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99993 99999999999999999999875 455555 59997 8888 99999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 551 ATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
+ ++.+++|++++. .+.|+|+.++++|++.+
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 354 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVA 354 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 5 888899999885 47899999999999865
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=270.63 Aligned_cols=196 Identities=16% Similarity=0.112 Sum_probs=160.0
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHH
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+++..++.+|.|+++|+..++.+.+ .| ++.+||||+|.+.|.|....
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~~------------------- 217 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDPS------------------- 217 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCSC-------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCccccc-------------------
Confidence 45677889999999999999887764 22 68999999998877543210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
..++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ ++++ ...+++.+.+..+.
T Consensus 218 ----------~~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 218 ----------PYAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMKH 275 (406)
T ss_dssp ----------SCCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCCH
T ss_pred ----------ccCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCCH
Confidence 11233799999999999999 4444332 3799999999987 1111 23457999988888
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHH-------HcCCcEEEcCCcCcccccccCcceEE-EccccccccCCCCCCH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDV 539 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~~-~~~~~~~~~~v~~~d~ 539 (586)
+++..+|+.||++++||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCCH
Confidence 899999999999999999999999999999 99999999987 677889999 8 99999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 007873 540 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 540 ~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 582 (586)
++|+++|.+++++.. . ..++.|||+.+++++++.
T Consensus 340 ~~la~ai~~ll~~~~------~---~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 340 DSVIAAITQALEAPR------V---RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HHHHHHHHHHHHCCC------C---CCSCCCBHHHHHHHHHCG
T ss_pred HHHHHHHHHHHhCcc------h---hhhhcCCHHHHHHHHHHh
Confidence 999999999999843 1 236889999999999876
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-27 Score=258.47 Aligned_cols=290 Identities=14% Similarity=0.118 Sum_probs=208.3
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCccc-ccccCCChhhccccccccCCCCCcCCcc
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+| |||+|||+..+++.+++... .++|+++++|...+ ... +.. +| .
T Consensus 124 ~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pfp-----~~~~~~~--lp--------------------~ 169 (482)
T 1uqt_A 124 DD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFP-----TPEIFNA--LP--------------------T 169 (482)
T ss_dssp TC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCC-----CHHHHTT--ST--------------------T
T ss_pred CC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCCCC-----CHHHHhh--Cc--------------------c
Confidence 68 99999999999999888753 58999999996422 110 000 01 1
Q ss_pred hhhhhHHhhcCCEEEEeCHHHHHHHhcCcc--CCCcc------hhhhhccCeeEecCCcccCCcCCCCccccccccCccc
Q 007873 307 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 378 (586)
Q Consensus 307 ~~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~g~~~------~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 378 (586)
...+...+..+|.+...+..+.+.+.+... .+.+. ...-+..++.+||||+|++.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 122344556789988888877766543110 11100 000112478999999999887543110
Q ss_pred cccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---hhH
Q 007873 379 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PME 445 (586)
Q Consensus 379 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~----~v~lvIvG~g~----~---~~~ 445 (586)
..... ..+++++++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00111 356777776 34899999999999999999999999854 2 58899999632 1 245
Q ss_pred HHHHHHHHHCC--------CceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCCcCc
Q 007873 446 KQLEQLEILYP--------EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 511 (586)
Q Consensus 446 ~~l~~l~~~~~--------~~v~~~-~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 511 (586)
+++++++.+.+ ..+.+. +.++.+++..+|+.||++++||..|+||++++||||||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 56666654422 125544 455788899999999999999999999999999999997 8999998888
Q ss_pred ccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 512 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 512 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.+.+. +|+++ +|.|++++|++|.+++++. ++.++++.++++ .+.|||+..+++|++.+
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l 451 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDL 451 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88873 78998 9999999999999999852 455666766664 36799999999998864
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=248.58 Aligned_cols=223 Identities=15% Similarity=0.091 Sum_probs=171.8
Q ss_pred hhHHh-hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcCCCCccccccccCccccccccHHHH
Q 007873 310 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 387 (586)
Q Consensus 310 ~~~~~-~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 387 (586)
.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+.... +
T Consensus 143 ~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------~ 195 (375)
T 3beo_A 143 NRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------S 195 (375)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------C
T ss_pred hhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------h
Confidence 33334 3499999999999999875 576644 89999999 787666443200 1
Q ss_pred HHHHHHhCCCCCCCCcEEEEEecCccc-cCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHHCCCceEEEe
Q 007873 388 EALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVA 463 (586)
Q Consensus 388 ~~l~~~~gl~~~~~~~~i~~iGrl~~~-KG~d~Ll~A~~~l~~--~~v~lvIvG~g~-~~~~~~l~~l~~~~~~~v~~~~ 463 (586)
..+++++ + ++.++++++||+++. ||++.+++|+.++.+ +++++++ |.|+ ..+.+.++++... ..++.+.+
T Consensus 196 ~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~g 269 (375)
T 3beo_A 196 HPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLIE 269 (375)
T ss_dssp CHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred HHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEeC
Confidence 1233333 2 234578899999876 999999999999865 6888655 6664 3345555555322 24688777
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-CcCcccccccCcceEEEccccccccCCCCCCHHHH
Q 007873 464 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 542 (586)
Q Consensus 464 ~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 542 (586)
.....++..+|+.||++|+|| |.+++|||+||+|||+++ .||..|++.+| +|+++ ++ |+++|
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~l 332 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEETI 332 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHHH
Confidence 666668889999999999999 788999999999999996 49999999888 99986 65 99999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHhc
Q 007873 543 STTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 543 a~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~~ 584 (586)
+++|.+++++ ++.+++|++++. .+.|+|+.+++.+++...
T Consensus 333 a~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9999999998 888888888763 468999999999988653
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-27 Score=246.73 Aligned_cols=226 Identities=15% Similarity=0.096 Sum_probs=171.6
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
.+.+|.++++|+..++.+.+ +|++.+ ++.+++||+ |...+.+... ......+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccchhhhHHHHH
Confidence 34599999999999998875 677644 799999995 4322211100 000001235667
Q ss_pred HhC-CCCCCCCcEEEEEecCccc-cCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 393 EVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 393 ~~g-l~~~~~~~~i~~iGrl~~~-KG~d~Ll~A~~~l~~--~~v~lvIv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
++| ++.+ +.++++++||+.++ ||++.+++|+.++.+ ++++|+++ |.++ .+.+.++++.... .++.+.+....
T Consensus 197 ~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~-~~~~~l~~~~~~~-~~v~~~g~~~~ 273 (384)
T 1vgv_A 197 NYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP-NVREPVNRILGHV-KNVILIDPQEY 273 (384)
T ss_dssp TCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH-HHHHHHHHHHTTC-TTEEEECCCCH
T ss_pred hccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH-HHHHHHHHHhhcC-CCEEEeCCCCH
Confidence 777 6432 33578899999876 999999999999865 68999886 4332 3556666664322 46877665555
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
+++..+|+.||++|+|| |.+++|||+||+|||+++. ||..|++.+| +|+++ ++ |+++|+++|
T Consensus 274 ~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d~~~la~~i 336 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-DKQRIVEEV 336 (384)
T ss_dssp HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-CHHHHHHHH
Confidence 77889999999999999 4458999999999999986 9999999888 99997 66 999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 547 RRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.+++++ ++.+++|++++. .+.|+|+.+++.+++.+
T Consensus 337 ~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 337 TRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp HHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred HHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHH
Confidence 999998 888899988763 46899999999998754
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=222.34 Aligned_cols=184 Identities=30% Similarity=0.511 Sum_probs=159.8
Q ss_pred EecCCcccCCcC--CCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCc-cccCHHHHHHHHhhcc
Q 007873 352 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 428 (586)
Q Consensus 352 vI~ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~ 428 (586)
+||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 489999999998 7641 1122356789999997 336999999999 9999999999999995
Q ss_pred --c--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcE
Q 007873 429 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 503 (586)
Q Consensus 429 --~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~Pv 503 (586)
+ ++++|+|+|.++..+.+.++++..+++ ++.+ .+..+.+++..+|+.||++|+||..|+||++++|||+||+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 689999999988667778888888887 7988 888888889999999999999999999999999999999999
Q ss_pred EEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Q 007873 504 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 566 (586)
Q Consensus 504 I~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~~~~~~~~~~~~ 566 (586)
|+++.||+.|++ ++.+|+++ +++|+++++++|.++++ + ++.+++|++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 99999998 89999999999999999 8 888999999885
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-26 Score=253.96 Aligned_cols=355 Identities=15% Similarity=0.153 Sum_probs=254.0
Q ss_pred HHHHHHHHHH-hHhhcccCCCCCCCCCCCCEEEEecCCccchHHH-HHHhhccCCCCC-------CCceEEEEEcCCccc
Q 007873 201 SLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQ 271 (586)
Q Consensus 201 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~ 271 (586)
.+|+.+.++. ++.+..... .+..-..|| +||+||||+++++. +++......|+- .+..++||+|++.++
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~-~~~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~e 350 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGR-KLHELADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPE 350 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-CGGGHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGG
T ss_pred HHHHHHHHHHHHHHHHHcCC-ChhhcCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHh
Confidence 4677887875 554321000 000000488 99999999999888 555442111111 378899999999998
Q ss_pred cc--cCcccccccC---------CChhhccc-----------cccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHH
Q 007873 272 GR--FAFEDFGLLN---------LPAQFKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQ 329 (586)
Q Consensus 272 ~~--~~~~~~~~~~---------l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ 329 (586)
+. |+...+..+- ++..|... +.. .+. .....+++++.++..|+.|.+||+.+.+
T Consensus 351 gle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i---~~~~~vnMa~lai~~S~~VNgVS~lH~e 426 (796)
T 1l5w_A 351 ALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAV---VHDKQVHMANLCVVGGFAVNGVAALHSD 426 (796)
T ss_dssp GSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCS---EETTEEEHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhh-hhc---ccCCcccHHHHHHHhcCccccccHHHHH
Confidence 85 6555442211 11111000 000 000 0112578889999999999999999999
Q ss_pred HHhcCccCCCcchhhhhccCeeEecCCcccCCc----CCCCccccccccC----------------ccc------ccccc
Q 007873 330 ELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST------VMDAK 383 (586)
Q Consensus 330 ~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~----------------~~~------~~~~~ 383 (586)
.+... .++ ...+ +.+.++..|.||||+..| +|..++.|...|+ ..+ +.+.|
T Consensus 427 ~ik~~-~f~-~~~~-~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K 503 (796)
T 1l5w_A 427 LVVKD-LFP-EYHQ-LWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIK 503 (796)
T ss_dssp HHHHT-TSH-HHHH-HCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHH
T ss_pred HHHhH-Hhh-HHHH-hCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 98742 222 1111 224589999999999999 7887777777766 333 23567
Q ss_pred HHHHHH----HHHHhCCCCCCCCcEEEEEecCccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH--
Q 007873 384 PLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ-- 447 (586)
Q Consensus 384 ~~~~~~----l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~-Ll~A~~~l~~---------~~v~lvIvG~g~~~~~~~-- 447 (586)
..+|.+ ++++.|++.+++.+.++++.|+.++||.++ ++..+.++.+ .+++|||.|++.+.++..
T Consensus 504 ~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~ 583 (796)
T 1l5w_A 504 QANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKN 583 (796)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHH
Confidence 777877 589999999999999999999999999999 8888887755 479999999988555444
Q ss_pred ----HHHHHH------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccc
Q 007873 448 ----LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVD 513 (586)
Q Consensus 448 ----l~~l~~------~~~~--~v~~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e 513 (586)
+.+++. ++++ +|.+...|+...++.++++||++++||+ +|+||+..+-+|.+|++.|++-.|...|
T Consensus 584 iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvE 663 (796)
T 1l5w_A 584 IIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVE 663 (796)
T ss_dssp HHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHH
T ss_pred HHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeee
Confidence 777777 6777 8999999999999999999999999999 9999999999999999999999999998
Q ss_pred cccc--CcceEEEccccccccCCCCCCHHHHH---HHHHHHHHhcC-HHHHHHHHHHHHHhcCCHHHH
Q 007873 514 TVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKVS 575 (586)
Q Consensus 514 ~v~~--g~~G~~~~~~~~~~~~v~~~d~~~la---~~I~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~ 575 (586)
+.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+++...|||+..
T Consensus 664 i~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~ 720 (796)
T 1l5w_A 664 IAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK 720 (796)
T ss_dssp HHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT
T ss_pred hhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH
Confidence 8765 47999994 3 666665 33222222110 236788888889999999763
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-27 Score=259.26 Aligned_cols=204 Identities=12% Similarity=0.046 Sum_probs=162.3
Q ss_pred cCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhC
Q 007873 316 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 395 (586)
Q Consensus 316 ~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 395 (586)
.+|.++++|+...+ ++ .++.+|||..++....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 11 27999999543322111110 112356778
Q ss_pred CCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEe-CCChhhHHHHHHHHHHCC---CceEEEeccChHH
Q 007873 396 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 469 (586)
Q Consensus 396 l~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 469 (586)
++.+ ++++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+.++++..+++ +++.+.+..+.++
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8633 35669999999 999999999999855 799999999 776 6677777777654 4688888888788
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEE-------cCCc-------CcccccccCcceEEEccccccccCCC
Q 007873 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 535 (586)
Q Consensus 470 ~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~~~~~~~~~~~~v~ 535 (586)
+..+|+.||++|+||.+ ++|++++|||+||+|||+ |+.| |+.|++.+
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------ 507 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------ 507 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC------------------
Confidence 89999999999999999 999999999999999999 9999 88887742
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHh
Q 007873 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGM-----AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 536 ~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~~ 583 (586)
|+++++++|.+++++ ++.+++|++++. .+.|||+.++++|++.+
T Consensus 508 --~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y 556 (568)
T 2vsy_A 508 --DDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALL 556 (568)
T ss_dssp --SHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH
Confidence 899999999999998 888889998874 26799999999998865
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=253.93 Aligned_cols=361 Identities=14% Similarity=0.133 Sum_probs=255.4
Q ss_pred HHHHHHHHHH-hHhhcccCCCCCCCCCCCCEEEEecCCccchHHH-HHHhhccCCCCC-------CCceEEEEEcCCccc
Q 007873 201 SLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQ 271 (586)
Q Consensus 201 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~ 271 (586)
.+|+.+.++. ++.+..... .+..-..|| +||+||||+++++. +++...-..|+- .+..++||+|++.++
T Consensus 263 ~ff~~a~lq~ilr~~~~~~~-~l~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~e 340 (796)
T 2c4m_A 263 YFFTSASLQAMIQDHLAHHK-DLSNFAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTE 340 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHSS-CSTTHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSST
T ss_pred HHHHHHHHHHHHHHHHHhCC-ChhhcCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHH
Confidence 4677787875 554311000 000000488 99999999999888 555432111111 367899999999998
Q ss_pred cc--cCccccccc---------CCChhhccccccccC------CCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcC
Q 007873 272 GR--FAFEDFGLL---------NLPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG 334 (586)
Q Consensus 272 ~~--~~~~~~~~~---------~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~ 334 (586)
+. |+...+..+ +++..+.....-..+ .........+++++.++..|+.|.+||+.+.+.+...
T Consensus 341 gle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~ 420 (796)
T 2c4m_A 341 ALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE 420 (796)
T ss_dssp TSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT
T ss_pred HhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh
Confidence 85 655544321 111111110000000 0000111257889999999999999999999998852
Q ss_pred ccCCCcchhhhhccCeeEecCCcccCCc----CCCCccccccccC-----------------ccc------cccccHHHH
Q 007873 335 EDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLK 387 (586)
Q Consensus 335 ~~~g~~~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~ 387 (586)
.++ ..-. ..+.++..|.||||+..| +|..++.|...|. ..+ +.+.|..+|
T Consensus 421 -~f~-~~~~-~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK 497 (796)
T 2c4m_A 421 -TLA-DWYA-LWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANK 497 (796)
T ss_dssp -TTH-HHHH-HCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHH
T ss_pred -hhh-hHHH-cCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHH
Confidence 232 1111 224589999999999999 7887777766666 333 235677777
Q ss_pred HH----HHHHhCCCCCCCCcEEEEEecCccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH------
Q 007873 388 EA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------ 447 (586)
Q Consensus 388 ~~----l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~-Ll~A~~~l~~---------~~v~lvIvG~g~~~~~~~------ 447 (586)
.+ ++++.|++.+++.+.++++.|+.++||.++ ++..+.++.+ .+++|||.|++.+.++..
T Consensus 498 ~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~ 577 (796)
T 2c4m_A 498 QDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKL 577 (796)
T ss_dssp HHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHH
Confidence 77 599999999999999999999999999999 8888887753 379999999988555444
Q ss_pred HHHHHH------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc
Q 007873 448 LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 517 (586)
Q Consensus 448 l~~l~~------~~~~--~v~~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 517 (586)
+.+++. ++++ +|.+...|+...++.++++||++++||+ +|+||+..+-+|.+|++.|++-.|...|+.++
T Consensus 578 i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~ 657 (796)
T 2c4m_A 578 INSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDS 657 (796)
T ss_dssp HHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHH
T ss_pred HHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhh
Confidence 777877 6777 8999999999999999999999999999 99999999999999999999998999888765
Q ss_pred --CcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCHHHH
Q 007873 518 --GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKVS 575 (586)
Q Consensus 518 --g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~ 575 (586)
..|||+||. ...++.++..+ .+..+-+. .+.++++..+++...|||+..
T Consensus 658 vG~~NgF~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~ 709 (796)
T 2c4m_A 658 VGEENAYIFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS 709 (796)
T ss_dssp HCGGGSEEESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC
T ss_pred cCCCcEEEecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH
Confidence 479999952 23667777665 33333221 235777777778889999653
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-25 Score=237.22 Aligned_cols=289 Identities=13% Similarity=0.139 Sum_probs=211.5
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcch
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (586)
.| +|..||+|..++|.+++... ++.++.|.+|...+ ....- ..+|.. ..
T Consensus 150 ~D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiPfP-----s~e~f-~~Lp~~------------------~r 198 (496)
T 3t5t_A 150 DP-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIPWP-----SADYW-RILPKE------------------IR 198 (496)
T ss_dssp SC-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSCCC-----CHHHH-TTSCHH------------------HH
T ss_pred CC-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCCCC-----CHHHH-hhCcHh------------------HH
Confidence 46 99999999999999999875 68999999995432 11110 011110 12
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCcc--C-CCcchh-------hhhccCeeEecCCcccCCcCCCCccccccccCcc
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGED--K-GVELDN-------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 377 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~~--~-g~~~~~-------~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~ 377 (586)
..+..++..+|.|.+.++.+++.+.+.+. . |.+.+. .-+..++.++|+|||++.|.+....
T Consensus 199 ~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~--------- 269 (496)
T 3t5t_A 199 TGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ--------- 269 (496)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC---------
T ss_pred HHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH---------
Confidence 34567788999999999999888664221 1 322110 0122478899999999999775320
Q ss_pred ccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--C---CeEEEEEeCC-----C--hhhH
Q 007873 378 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPME 445 (586)
Q Consensus 378 ~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~---~v~lvIvG~g-----~--~~~~ 445 (586)
. ...++++++ +.++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.. + ..++
T Consensus 270 ----~----~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~ 335 (496)
T 3t5t_A 270 ----L----PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYV 335 (496)
T ss_dssp ----C----CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHH
T ss_pred ----H----HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHH
Confidence 0 145677776 358999999999999999999999 7754 4 4678888742 2 2345
Q ss_pred HHHHHHHHHCCC-----ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC---CcEEEcCCcCccccccc
Q 007873 446 KQLEQLEILYPE-----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVEE 517 (586)
Q Consensus 446 ~~l~~l~~~~~~-----~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~~ 517 (586)
+++++++.+.+. .|.+.+..+.+++..+|+.||++++||..|+||++.+|||||| .|+|+|..+|..+.+.
T Consensus 336 ~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~- 414 (496)
T 3t5t_A 336 HRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG- 414 (496)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-
T ss_pred HHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-
Confidence 666666554321 4777777788889999999999999999999999999999997 8999999999888884
Q ss_pred CcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 518 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 518 g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
.+|+++ +|.|++++|++|.++|+++ ++.++++.++.+ .+.++++.-++.+++..
T Consensus 415 -~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L 470 (496)
T 3t5t_A 415 -EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGL 470 (496)
T ss_dssp -GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHH
T ss_pred -CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 379998 9999999999999999974 344455555443 47788888888887754
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=205.96 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=136.1
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+++..+|+.||++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~ 78 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLY 78 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEE
Confidence 3789999999999999999999999965 799999999988 567778887777766766 666788899999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCC-cEEE-cCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 558 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~ 558 (586)
++||..|+||++++|||+||+ |||+ ++.|+..|++.++.+ ++ +++|+++++++|.+++++ ++.+
T Consensus 79 v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~ 144 (166)
T 3qhp_A 79 VHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLER 144 (166)
T ss_dssp EECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHH
T ss_pred EECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHH
Confidence 999999999999999999998 9999 568999999998766 44 899999999999999998 8888
Q ss_pred HHHHHHHH--HhcCCHHHHHHH
Q 007873 559 AEMMKNGM--AQDLSWKVSIGT 578 (586)
Q Consensus 559 ~~~~~~~~--~~~fsw~~~a~~ 578 (586)
+++++++. .++|||+.++++
T Consensus 145 ~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 145 ERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHCChhhhhcC
Confidence 99998884 588999998764
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-24 Score=237.02 Aligned_cols=329 Identities=16% Similarity=0.161 Sum_probs=238.5
Q ss_pred CCCEEEEecCCccchHHH-HHHhhccCCCCC-------CCceEEEEEcCCccccc--cCcccccccC---------CChh
Q 007873 227 GEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLN---------LPAQ 287 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~~~--~~~~~~~~~~---------l~~~ 287 (586)
.|| +||+||||+++++. +++...-..|+- ....++||+|++.++|. |+...+..+- ++..
T Consensus 320 ~p~-viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 320 DKV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCc-EEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 478 99999999999888 565433111110 23459999999999997 7665553321 1111
Q ss_pred hccc-----------cccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC
Q 007873 288 FKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 356 (586)
Q Consensus 288 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng 356 (586)
|... +......+.. ....+++++.++..|+.|.+||+.+.+.+... .++ +.-. ..+.++..|.||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNG 474 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEECCCC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhcccccCC
Confidence 1000 0000110100 12357889999999999999999999998642 232 1111 124589999999
Q ss_pred cccCCc----CCCCccccccc-----------------cCc-cccc----cccHHHHHH----HHHHhCCCCCCCCcEEE
Q 007873 357 MDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVIG 406 (586)
Q Consensus 357 vd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----l~~~~gl~~~~~~~~i~ 406 (586)
||+..| +|..++.|... |.. .+.. +.|..+|.+ ++++.|++.+++.++++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 78766555533 664 3332 456667776 89999999999999999
Q ss_pred EEecCccccCHHHH-HHHHhhcc---c-C-----CeEEEEEeCCChhhHHH------HHHHHHHC------CC--ceEEE
Q 007873 407 FIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARGV 462 (586)
Q Consensus 407 ~iGrl~~~KG~d~L-l~A~~~l~---~-~-----~v~lvIvG~g~~~~~~~------l~~l~~~~------~~--~v~~~ 462 (586)
++.|+.++||.+++ +..+.++. + + +++|||.|++.+.++.. +.+++..+ ++ ++.+.
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 99999999999998 88888774 2 2 68999999988555444 77777655 55 79999
Q ss_pred eccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCcccccc--cCcceEEEccccccccCCCCCC
Q 007873 463 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVD 538 (586)
Q Consensus 463 ~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~v~~~d 538 (586)
..|+...++.++++||++++||+ +|+||+..+-||.+|++.|++--|...|+.+ ...|||+|| . .
T Consensus 635 ~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~-~ 703 (824)
T 2gj4_A 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------M-R 703 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------C-C
T ss_pred CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------C-c
Confidence 99999999999999999999999 9999999999999999999999998888875 357999994 2 2
Q ss_pred HHHHHHHHH-------HHHHhcCHHHHHHHHHHHHHhcCCHHH
Q 007873 539 VAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKV 574 (586)
Q Consensus 539 ~~~la~~I~-------~ll~~~~~~~~~~~~~~~~~~~fsw~~ 574 (586)
++++ ..+. .+.+. .+.++++..+.+...|||..
T Consensus 704 ~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~ 743 (824)
T 2gj4_A 704 VEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQ 743 (824)
T ss_dssp HHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTS
T ss_pred HHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCC
Confidence 5555 3331 23333 35677777788889999865
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-22 Score=211.65 Aligned_cols=211 Identities=14% Similarity=0.066 Sum_probs=152.5
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
...+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+. +..+++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~~ 193 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLPE 193 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCCT
T ss_pred HHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHHH
Confidence 45699999999999999886 577644 899999975 42211100 000111
Q ss_pred HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHHCCCceEEEeccChHH
Q 007873 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 469 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 469 (586)
++ + ++.++++++||+...||++.+++|+.++.+ ++++++++ |++. ...+.++++... .+++.+.+.....+
T Consensus 194 ~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 194 GL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYGS 267 (376)
T ss_dssp TC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHHH
T ss_pred hc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHHH
Confidence 11 1 234577889999999999999999999865 68998886 6554 245666666432 23687776555557
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 470 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 470 ~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
+..+|+.||++|.|| | |+ ++|||+||+|||++ +.+|..+++.++ +|+++ + .|+++|+++|.+
T Consensus 268 ~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~~ 330 (376)
T 1v4v_A 268 MAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVKG 330 (376)
T ss_dssp HHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHHH
T ss_pred HHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHHH
Confidence 788999999999999 2 44 88999999999998 578999988665 89885 4 599999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHhcCCH----HHHHHHHHH
Q 007873 549 ALATYGTQALAEMMKNGMAQDLSW----KVSIGTVQE 581 (586)
Q Consensus 549 ll~~~~~~~~~~~~~~~~~~~fsw----~~~a~~~~~ 581 (586)
++++ ++.+++|++++ +.|.| +.+++.+.+
T Consensus 331 ll~d--~~~~~~~~~~~--~~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 331 LLEN--PEELSRMRKAK--NPYGDGKAGLMVARGVAW 363 (376)
T ss_dssp HHTC--HHHHHHHHHSC--CSSCCSCHHHHHHHHHHH
T ss_pred HHhC--hHhhhhhcccC--CCCCCChHHHHHHHHHHH
Confidence 9998 88888888643 44444 455554444
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.7e-22 Score=184.93 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=125.1
Q ss_pred CCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCCh--hhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 400 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 400 ~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
++.++|+|+|++.+.||++.+++|+..+ ++++|+|+|.|+. .+++.++++...+++++.+.+..+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 3558999999999999999999999998 7899999999873 34444443334466689999999999999999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
|++++||..|++|++++|||+||+|||+++.|++.|++.++.+|++ + +.|+++++++|.+++++.
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999999999999999999999997 3 789999999999999983
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-21 Score=200.88 Aligned_cols=199 Identities=13% Similarity=0.045 Sum_probs=146.3
Q ss_pred hhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHH
Q 007873 309 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 388 (586)
Q Consensus 309 ~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 388 (586)
+++..++.+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+....
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 4566788999999999999999986 5654 688999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEE-----
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG----- 461 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~----- 461 (586)
++ .+ ..+++++.|+ ..||++.|++|++++.+ ++++|+|+|+|+. ..+.++++..+.+-....
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1257777775 46899999999999865 6899999999873 224566666665522110
Q ss_pred -EeccC--hHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCcEEEc-CCcCcccccccC-cceEEEccccccccCCC
Q 007873 462 -VAKFN--IPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEAVD 535 (586)
Q Consensus 462 -~~~~~--~~~~~~~l~~aDi~l~PS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~~~~~~~~~~~~v~ 535 (586)
.+.+. .+++..+|+.||++++||.+ |.+|++++||||||+|||++ +.++..|++.+. .+|+++ .
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~----------~ 329 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF----------E 329 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE----------E
T ss_pred CcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE----------E
Confidence 11221 25577899999999888765 67899999999999999986 789999988763 578877 7
Q ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 007873 536 PVDVAAVSTTVRRALATYGTQALAEMMKNGM 566 (586)
Q Consensus 536 ~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~ 566 (586)
++|+++|+++|.+++++ +.+++|+++++
T Consensus 330 ~~d~~~La~ai~~ll~d---~~r~~mg~~ar 357 (374)
T 2xci_A 330 VKNETELVTKLTELLSV---KKEIKVEEKSR 357 (374)
T ss_dssp CCSHHHHHHHHHHHHHS---CCCCCHHHHHH
T ss_pred eCCHHHHHHHHHHHHhH---HHHHHHHHHHH
Confidence 89999999999999985 34566777765
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-19 Score=186.60 Aligned_cols=247 Identities=16% Similarity=0.080 Sum_probs=171.3
Q ss_pred CCCEEEEecC-CccchH-HHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCC
Q 007873 227 GEDVVFVAND-WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 304 (586)
Q Consensus 227 ~pDvii~~h~-~~~~~~-~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 304 (586)
++|+||+.+. |++... ..++++..+ .++|+++++||+.+.. +. . . .
T Consensus 74 ~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~----------~-------------~---~ 121 (339)
T 3rhz_A 74 HGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS----------G-------------N---F 121 (339)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG----------G-------------G---G
T ss_pred CCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc----------c-------------c---h
Confidence 5895554333 433333 334444321 3899999999986521 10 0 0 0
Q ss_pred cchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccH
Q 007873 305 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (586)
Q Consensus 305 ~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (586)
.....++..++.||.|+++|+.+++.+.+ +|++.+ ++.++++. |.. .+..
T Consensus 122 ~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~~-~~~--~~~~------------------ 171 (339)
T 3rhz_A 122 YLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGMW-DHP--TQAP------------------ 171 (339)
T ss_dssp GGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCSC-CCC--CCCC------------------
T ss_pred hhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCCC-Ccc--Cccc------------------
Confidence 12235677899999999999999999986 676533 45433332 111 0100
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEec
Q 007873 385 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 464 (586)
Q Consensus 385 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~ 464 (586)
+....+.++|+|+|+++....+ ..+ .++++|+|+|+|+.. +++ ++.+.+.
T Consensus 172 -----------~~~~~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G~ 221 (339)
T 3rhz_A 172 -----------MFPAGLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE----------LPQ-NVHKINY 221 (339)
T ss_dssp -----------CCCCEEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC----------CCT-TEEEEEC
T ss_pred -----------ccccCCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc----------CcC-CEEEeCC
Confidence 0011244799999999953322 222 378999999999842 244 7999999
Q ss_pred cChHHHHHHHHhccEEEEcCCC-------CCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCC
Q 007873 465 FNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 537 (586)
Q Consensus 465 ~~~~~~~~~l~~aDi~l~PS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~ 537 (586)
++.++++.+++.+|+.+++... ..+|.+++||||||+|||+++.+++.|++.++.+|+++ .
T Consensus 222 ~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------~ 289 (339)
T 3rhz_A 222 RPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------K 289 (339)
T ss_dssp CCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------S
T ss_pred CCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------C
Confidence 9999999999999999886211 35799999999999999999999999999999999987 3
Q ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHH
Q 007873 538 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQE 581 (586)
Q Consensus 538 d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~ 581 (586)
+.+++++.|..+. ++.+++|++|+. ++.++|....++.+.
T Consensus 290 ~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 290 DVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRRLLT 331 (339)
T ss_dssp SHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 6889998888763 457899999985 355666666655544
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.2e-18 Score=179.05 Aligned_cols=218 Identities=12% Similarity=0.107 Sum_probs=156.0
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
+.+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +...+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------chHHHHh
Confidence 3589999999999999986 687755 89999884 565444322100 0122333
Q ss_pred hCCCCCCCCcEEEEEecCcc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHH
Q 007873 394 VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~~-~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (586)
+ + ++..++++.||.+. .|+++.+++|+.++.+ +++++++.+.......+.+++.... ..++.........+.
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGG-HERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCC-CCCEEEeCCCCHHHH
Confidence 3 2 23355667777654 4789999999999865 7899998743222345556554322 236777776666778
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 549 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~l 549 (586)
..+++.||+++.+| |.+.+|||++|+|+|+. +.++..|.+..| +|+++ .+ |+++++++|.++
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~~ai~~l 358 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLIKEALDL 358 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHHHHHHHH
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHHHHHHHH
Confidence 88999999999887 56669999999999999 688888988766 88885 44 999999999999
Q ss_pred HHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 550 LATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 550 l~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
+++ ++.+++|++++ +....+++.+++.+.+..
T Consensus 359 l~~--~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 359 LDN--KESHDKMAQAANPYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHC--HHHHHHHHHSCCTTCCSCHHHHHHHHHHHHH
T ss_pred HcC--HHHHHHHHhhcCcccCCcHHHHHHHHHHHHh
Confidence 998 88888887754 234556667776665543
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=185.03 Aligned_cols=157 Identities=15% Similarity=0.065 Sum_probs=121.0
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
..++++.|++. .++.+.+.+++..+.+.++++++++++.. ..+.++ ..+.++.+.+..+ ...+|+.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEEE
Confidence 35677888886 78888888888888666788877766542 111221 2345677766553 567999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCc----CcccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHhcCH
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 555 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~~ 555 (586)
.++ .+.+++|||++|+|+|+...+ +..+.+.+..+|+++ .++ |+++|+++|.+++++ +
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~--~ 377 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE--E 377 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--H
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--H
Confidence 765 348999999999999996654 478888888899987 666 999999999999998 7
Q ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 556 QALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 556 ~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
+.+++|++++ +.+.++|+.+++.+++..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 7888888776 357789999999988764
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=180.19 Aligned_cols=222 Identities=14% Similarity=0.057 Sum_probs=154.6
Q ss_pred hhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHH
Q 007873 314 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 392 (586)
Q Consensus 314 ~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (586)
-+.+|.+++.|+..++.+.+ .|++.+ ++.++.|.+ |...+.+... +.....+.++++
T Consensus 164 ~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~~~~~r~ 221 (396)
T 3dzc_A 164 AALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDLQATLES 221 (396)
T ss_dssp HHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHHHHHHHH
T ss_pred HHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhhHHHHHH
Confidence 35789999999999999986 688755 889998854 4322211000 000111367788
Q ss_pred HhC-CCCCCCCcEEEEEecCc-cccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHHCCCceEEEeccCh
Q 007873 393 EVG-LPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNI 467 (586)
Q Consensus 393 ~~g-l~~~~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~--~~v~lvIv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 467 (586)
++| ++.+. ..++++.+|.+ ..|+++.+++|+.++.+ ++++|++. |.++ ...+.++++... ..++........
T Consensus 222 ~lg~l~~~~-~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~-~~~~~l~~~~~~-~~~v~~~~~lg~ 298 (396)
T 3dzc_A 222 QFPMLDASK-KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNP-NVREPVNKLLKG-VSNIVLIEPQQY 298 (396)
T ss_dssp TCTTCCTTS-EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCH-HHHHHHHHHTTT-CTTEEEECCCCH
T ss_pred HhCccCCCC-CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCCh-HHHHHHHHHHcC-CCCEEEeCCCCH
Confidence 898 44322 23444555654 35789999999999865 78999885 5443 345556554322 235776655555
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
.+...+|+.||++|.+| |.+++|||++|+|+|++ +.++..|++.+| +++++ +.|+++|+++|
T Consensus 299 ~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv-----------~~d~~~l~~ai 361 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDS-----GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV-----------GTNQQQICDAL 361 (396)
T ss_dssp HHHHHHHHHCSEEEESC-----SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC-----------TTCHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECC-----ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc-----------CCCHHHHHHHH
Confidence 56778999999999998 34459999999999999 688888998887 56764 34899999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 007873 547 RRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQE 581 (586)
Q Consensus 547 ~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 581 (586)
.+++++ ++.+++|++++ ..|.....++++.+
T Consensus 362 ~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~ 392 (396)
T 3dzc_A 362 SLLLTD--PQAYQAMSQAH--NPYGDGKACQRIAD 392 (396)
T ss_dssp HHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHH
T ss_pred HHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHH
Confidence 999998 88888888764 33544445555443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-15 Score=154.68 Aligned_cols=159 Identities=13% Similarity=0.070 Sum_probs=110.8
Q ss_pred cEEEEEecCccccCHHHHHHHHhhccc-CCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.++++.|++...+..+.+.+++..+.. .++++++ +|.+. .+ .+.+...+.+.++.... |. +++.++|+.||++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~~-f~-~dm~~~l~~aDlv 256 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVAP-FI-SDMAAAYAWADLV 256 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEES-CC-SCHHHHHHHCSEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceeccccccccccc-ch-hhhhhhhccceEE
Confidence 345556788888989999999999865 4566554 44443 33 33344445555555443 32 3466799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCc--------ccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll 550 (586)
|.-+ -++++.|+|++|+|+|....+.. .+.+.+...|+++ +.. ++++|+++|.+++
T Consensus 257 I~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 257 ICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred EecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHH
Confidence 9533 37889999999999998875432 2345566678876 443 5899999999999
Q ss_pred HhcCHHHHHHHHHHHHH--hcCCHHHHHHHHHHH
Q 007873 551 ATYGTQALAEMMKNGMA--QDLSWKVSIGTVQEE 582 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 582 (586)
+| ++.+++|++++.+ .....+.+++.+++.
T Consensus 323 ~d--~~~~~~m~~~a~~~~~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 323 MH--PETLRSMADQARSLAKPEATRTVVDACLEV 354 (365)
T ss_dssp HC--THHHHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 99 8899999999863 445667777777653
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3e-16 Score=166.09 Aligned_cols=153 Identities=13% Similarity=0.117 Sum_probs=104.9
Q ss_pred CCcEEEEEecCcccc----------CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHH
Q 007873 401 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470 (586)
Q Consensus 401 ~~~~i~~iGrl~~~K----------G~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 470 (586)
..+++++.|++...| .++.+++++..+ ++++++++++.. .+.++ ..+.++......+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 346778889996544 467777777665 789998887752 22332 3456787776553 4
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEE----cCCcCcccccccCcceEEEccccccccCCCCC--CHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 544 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~ 544 (586)
..+++.||++|. ++-+.+++|||++|+|+|+ .+..+..+.+.+..+|+++ ++. |+++|++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 569999999995 4557899999999999999 5555788888899999986 665 7899999
Q ss_pred HHHHHHHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Q 007873 545 TVRRALATYGTQALAEMMKNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 545 ~I~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 581 (586)
+|.+++++ ++.+++|++.+ +....+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 77777777766 4578999999987753
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-15 Score=161.05 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=111.9
Q ss_pred CCcEEEEEecCccccCHHHHHHHHhhccc-CCeEE-EEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007873 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 478 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~-~~v~l-vIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 478 (586)
+.+++++.|++. .++.+.+.+++..+.+ +++++ +++|.+.. .+.++ .++.++...+..+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~--~~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVT--PAELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---C--GGGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC--hHHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788999998 5666665555555544 57888 47887752 11221 245567766655543 6899999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHh
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 552 (586)
++|..+ -+++++|||++|+|+|++..++ ..+.+.+...|+.+ +++ |+++|+++|.+++++
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 999754 2379999999999999998765 46667777889986 655 899999999999998
Q ss_pred cCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 007873 553 YGTQALAEMMKNG--MAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 553 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (586)
++.++++++.+ +.+..+++.+++.+++.
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 397 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAE 397 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 77777777665 34568999999988764
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-14 Score=153.23 Aligned_cols=156 Identities=13% Similarity=0.137 Sum_probs=113.2
Q ss_pred CcEEEEEecCccccCH-HHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 402 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~-d~Ll~A~~~l~~-~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
..++++.|++...|+. ..+++++.+..+ ++++++++|++.. .+.++ ..+.++......+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3566677998765443 555555444433 5899999987752 11221 344567766554433 46799999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEE----cCCcCcccccccCcceEEEccccccccCCCC----CCHHHHHHHHHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 551 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~----~d~~~la~~I~~ll~ 551 (586)
+|. ++-+++++|||++|+|+|+ .+..+..+.+.+...|+++ .+ .|+++|+++|.++++
T Consensus 290 ~v~----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VIC----AGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEe----CCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 995 4556799999999999999 4455677788888899987 66 789999999999999
Q ss_pred hcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 007873 552 TYGTQALAEMMKNG--MAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 552 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (586)
+ ++.+++|++.+ +....+|+.+++.+++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 386 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENT 386 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8 66677776655 45778999999988764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.4e-14 Score=148.76 Aligned_cols=153 Identities=13% Similarity=0.077 Sum_probs=112.4
Q ss_pred CcEEEEEecCccc-cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 402 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 402 ~~~i~~iGrl~~~-KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+++++.|++... ++.+.+.+++..+.+.+++++++|++.. .+.++ ..+.++......+ ..++++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCEE
Confidence 4677888999655 4655555555555445889999887762 11121 3456787776653 34589999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEE----cCCcCcc--cccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHh
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 552 (586)
|. .+-+.+++|||++|+|+|+ .+..+.. +.+.+...|+.+ ++. ++++++ +++++
T Consensus 304 v~----~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VH----HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EE----CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 95 4556899999999999999 6678888 999998999986 554 566666 78887
Q ss_pred cCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 553 YGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 553 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
+..+++|++.+ +....+|+.+++.+++..
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 77777777766 467899999999887653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.5e-13 Score=142.04 Aligned_cols=155 Identities=14% Similarity=0.053 Sum_probs=108.6
Q ss_pred CCcEEEEEecCcccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 401 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 401 ~~~~i~~iGrl~~~K--G~d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
...++++.|+....+ .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++......+.. ++++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 345678889987665 355555555543 467665 565531 11121 245567766554443 799999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-----CcCcccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHH
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS-----TGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~-----~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll 550 (586)
|++|..+- ..+++|||++|+|+|+.. ..+..+.+.+...|..+ .++ |+++|+++|.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99997542 378899999999999554 45677788888899886 554 8999999999999
Q ss_pred HhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 551 ATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
++ ++.++++.+.+ +....+++.+++.+++..
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 98 76666666654 456788999988887643
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=8.8e-12 Score=130.90 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=107.6
Q ss_pred CcEEEEEecCccc-------cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007873 402 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 474 (586)
Q Consensus 402 ~~~i~~iGrl~~~-------KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 474 (586)
..++++.|++... +.++.+++++..+ ++++++++++. ..+.++. .+.++.. ...+. .++|
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 4578899999875 6788888888765 78888866543 2223332 3456776 55443 4588
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHH
Q 007873 475 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 548 (586)
Q Consensus 475 ~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ 548 (586)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+...|+.+ ++. ++++|+++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999853 3468999999999999998744 67777777789886 544 79999999999
Q ss_pred HHHhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Q 007873 549 ALATYGTQALAEMMKNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 549 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 581 (586)
++++ ++.++++.+.+ +...-.-+.+++.+++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 376 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQ 376 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9998 66666666654 2334455666655543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.2e-12 Score=135.68 Aligned_cols=155 Identities=13% Similarity=0.018 Sum_probs=107.1
Q ss_pred CCcEEEEEecCcccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 401 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 401 ~~~~i~~iGrl~~~K--G~d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
...++++.|+..... .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 345677888876443 245555555544 488776 665532 11121 245567766544443 699999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CCcCcccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHH
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 551 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 551 (586)
|++|..+ -..+++|||++|+|+|+. +.....+.+.+...|..+ .++ ++++|+++|.++++
T Consensus 315 d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 9999753 236889999999999994 445567777777888876 554 89999999999999
Q ss_pred hcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHHh
Q 007873 552 TYGTQALAEMMKNG--MAQDLSWKVSIGTVQEED 583 (586)
Q Consensus 552 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~~ 583 (586)
+ ++.++++.+.+ +.....++.+++.+++..
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYL 412 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 8 66666666654 456788888888877653
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=144.21 Aligned_cols=190 Identities=20% Similarity=0.146 Sum_probs=133.6
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCc-ccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
+.+|.+++.++..++.+.+ .|++.+ ++.++.|.+ |...+.. ....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~~------------------~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRFM------------------PKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHHH------------------HHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHhh------------------hhcchhHHHHH
Confidence 4689999999999999986 687755 788888743 4221110 11234567888
Q ss_pred hCCCCCCCCcEEEEEecCc---cccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHH-H-HHCCCceEEEeccCh
Q 007873 394 VGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGVAKFNI 467 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~---~~KG~d~Ll~A~~~l~~~-~v~lvIvG~g~~~~~~~l~~l-~-~~~~~~v~~~~~~~~ 467 (586)
+|++. +..++++.||.+ ..|+++.+++|+.++.+. ++++++... + ...+.++++ . .....++.....+..
T Consensus 198 lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~-p-~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH-P-RTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC-H-HHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC-h-HHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 99864 235666677754 347899999999998653 788777543 2 244455544 1 111235766555565
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc-CcccccccCcceEEEccccccccCCCCCCHHHHHHHH
Q 007873 468 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 546 (586)
Q Consensus 468 ~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I 546 (586)
.+...+++.||+++.+| |.++.||+++|+|+|+.... +..|.++.| +++++ +.|++++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv-----------~~d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS-----------GFKAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC-----------CSSHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc-----------CCCHHHHHHHH
Confidence 66778999999999776 66789999999999998654 367777765 66764 35999999999
Q ss_pred HHHHHh
Q 007873 547 RRALAT 552 (586)
Q Consensus 547 ~~ll~~ 552 (586)
.+++++
T Consensus 337 ~~ll~d 342 (385)
T 4hwg_A 337 KTITEE 342 (385)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 999987
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-10 Score=125.01 Aligned_cols=153 Identities=16% Similarity=0.104 Sum_probs=109.5
Q ss_pred CcEEEEEecCcc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 402 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 402 ~~~i~~iGrl~~-----~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
..++++.|++.. .|.++.+++++..+ ++++++.+.+.. .+.+ . ..+.++......+. ..+|..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~--~~~l---~-~~~~~v~~~~~~~~---~~ll~~ 335 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ--LEGV---A-NIPDNVRTVGFVPM---HALLPT 335 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT--TSSC---S-SCCSSEEECCSCCH---HHHGGG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc--hhhh---c-cCCCCEEEecCCCH---HHHHhh
Confidence 357788899875 48899999999876 688888766542 1111 1 24556776655553 357899
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll 550 (586)
||++|.. +-+++++|||++|+|+|+....+ ..+.+.+...|+.+ ++. ++++|+++|.+++
T Consensus 336 ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 336 CAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVL 401 (441)
T ss_dssp CSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred CCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHh
Confidence 9999973 44579999999999999998743 66677777889876 554 8999999999999
Q ss_pred HhcCHHHHHHHHHHH--HHhcCCHHHHHHHHHHH
Q 007873 551 ATYGTQALAEMMKNG--MAQDLSWKVSIGTVQEE 582 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 582 (586)
++ ++.++++.+.+ +.....++.+++.+++.
T Consensus 402 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 433 (441)
T 2yjn_A 402 DD--PAHRAGAARMRDDMLAEPSPAEVVGICEEL 433 (441)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 98 66666666654 35678888888887764
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-09 Score=113.19 Aligned_cols=155 Identities=8% Similarity=-0.007 Sum_probs=100.7
Q ss_pred CCcEEEEEecCccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 401 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 401 ~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lv-IvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
...++++.|+.. .+..+.+.+++..+.+.+++++ ++|.+... +.+ ..++.++......+.. .+|+.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 345677889887 4444444444444444577874 56775421 111 1245567766544433 58999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHhc
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 553 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~ 553 (586)
+|.. +-.++++|||++|+|+|+....+ ..+.+.+...|+.+ +.. ++++++++|.+++++
T Consensus 325 ~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 8863 22378999999999999997643 45566667788875 443 899999999999988
Q ss_pred CHHHHHHHHHHH--HHhcCCHHHHHHHHHH
Q 007873 554 GTQALAEMMKNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 554 ~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 581 (586)
++.++++.+.+ +...-..+..++.+++
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 418 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEG 418 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 65555555443 2344556666665554
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.9e-09 Score=110.98 Aligned_cols=153 Identities=15% Similarity=0.114 Sum_probs=94.0
Q ss_pred CcEEEEEecCcccc-CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 402 IPVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 402 ~~~i~~iGrl~~~K-G~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
..+++..|++...+ +.+.+.+++..+.+.+.++++.+.+... +.....+.++....+.+. ..+|..||++
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~v~~~~~~p~---~~lL~~~~~~ 308 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL------ALLGELPANVRVVEWIPL---GALLETCDAI 308 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC------CCCCCCCTTEEEECCCCH---HHHHTTCSEE
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc------cccccCCCCEEEEeecCH---HHHhhhhhhe
Confidence 35666778876544 3455566666665667787776654311 011234556765555553 3588999998
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHH
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 556 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~ 556 (586)
|. .+-.++++|||++|+|+|+....+ ..+.+.+...|+.+ +. .+..+++|+++|+| +.
T Consensus 309 v~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~--~~~~~~al~~lL~d--~~ 370 (400)
T 4amg_A 309 IH----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EA--GSLGAEQCRRLLDD--AG 370 (400)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CT--TTCSHHHHHHHHHC--HH
T ss_pred ec----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CC--CCchHHHHHHHHcC--HH
Confidence 84 344578999999999999965443 55666666678765 43 34467899999998 54
Q ss_pred HHHHHHHHH--HHhcCCHHHHHHHHHH
Q 007873 557 ALAEMMKNG--MAQDLSWKVSIGTVQE 581 (586)
Q Consensus 557 ~~~~~~~~~--~~~~fsw~~~a~~~~~ 581 (586)
.+++..+-+ ++..=+-...++.+++
T Consensus 371 ~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 371 LREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 433322221 2333367777777665
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-08 Score=104.79 Aligned_cols=150 Identities=13% Similarity=0.070 Sum_probs=100.1
Q ss_pred CcEEEEEecCc-cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 402 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 402 ~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+++++.|++. ..+.++.+++++..+ ++++++.++... .. . ...+.++......+. ..++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~---~~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNH---QVLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCH---HHHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCH---HHHHhhCcEE
Confidence 46778889988 777788888888876 677777654331 10 0 123456776655443 3588999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCC--CCHHHHHHHHHHHHHhcC
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATYG 554 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~I~~ll~~~~ 554 (586)
|..+ -..++.||+++|+|+|+....+ ..+.+.+...|..+ .+ .++++|+++|.++++
T Consensus 289 v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l----------~~~~~~~~~l~~ai~~ll~--- 351 (404)
T 3h4t_A 289 VHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH----------DGPTPTVESLSAALATALT--- 351 (404)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHHTS---
T ss_pred EECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc----------CcCCCCHHHHHHHHHHHhC---
Confidence 9532 2378999999999999986544 33445566678875 43 379999999999986
Q ss_pred HHHHHHHHHHHH--HhcCCHHHHHHHHHHH
Q 007873 555 TQALAEMMKNGM--AQDLSWKVSIGTVQEE 582 (586)
Q Consensus 555 ~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 582 (586)
++.++++.+.+. .. -.++.+++.+++.
T Consensus 352 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 380 (404)
T 3h4t_A 352 PGIRARAAAVAGTIRT-DGTTVAAKLLLEA 380 (404)
T ss_dssp HHHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence 344555554432 23 4666666666543
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=6.2e-09 Score=96.24 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=94.5
Q ss_pred CcEEEEEecCc---cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007873 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 476 (586)
Q Consensus 402 ~~~i~~iGrl~---~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~ 476 (586)
..++++.|++. +.|.+..+++++..+ +.++++++++... ..++.++......+.. +++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCCC
Confidence 46888899986 778889999998765 4788877765521 1245568777665653 345 99
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc----CcccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 550 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll 550 (586)
||++|.. +-+++++|||++|+|+|+.... +..+.+.+...|+.+ ++. ++++|+++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999974 4469999999999999999864 456677788899986 655 8999999999999
Q ss_pred Hh
Q 007873 551 AT 552 (586)
Q Consensus 551 ~~ 552 (586)
++
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.76 E-value=9.5e-07 Score=93.56 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=93.3
Q ss_pred CcEEEEEecCc---cccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007873 402 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 477 (586)
Q Consensus 402 ~~~i~~iGrl~---~~KG~d~Ll~A~~~l~~~~v~lvIv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 477 (586)
..++++.|++. ..+.++.+++++..+ +++++++ |.+... . ...+.++......+. .+++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 35778889985 577788888888876 5667664 665421 1 234556766555453 3578999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
|++|. .+-.++++||+++|+|+|+....+ ..+.+.+...|+.+. .+..++++++++|.++ ++
T Consensus 304 d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 99997 233469999999999999976533 555666677888750 1235899999999999 77
Q ss_pred CHHHHHHHHHH
Q 007873 554 GTQALAEMMKN 564 (586)
Q Consensus 554 ~~~~~~~~~~~ 564 (586)
++.++++.+.
T Consensus 370 -~~~~~~~~~~ 379 (416)
T 1rrv_A 370 -PETRARAEAV 379 (416)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 6655555554
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.70 E-value=2.3e-07 Score=101.66 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=112.2
Q ss_pred HhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEE--EEeCCCh---hhHHHHHHHHHHCCCceEEEecc
Q 007873 393 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGKK---PMEKQLEQLEILYPEKARGVAKF 465 (586)
Q Consensus 393 ~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lv--IvG~g~~---~~~~~l~~l~~~~~~~v~~~~~~ 465 (586)
.++++.+.+.++++.+.++ .|..+.+++++.++.+ |+..++ ++|.+.. ...+.+.+... .+.+.+.+..
T Consensus 432 ~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI--~~Rv~F~g~~ 507 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYL--GDSATAHPHS 507 (631)
T ss_dssp CCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHH--GGGEEEECCC
T ss_pred cccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCC--CccEEEcCCC
Confidence 3566644345677777764 7999999999998876 665553 3674322 22233333332 2468888777
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccc------cCcceE-EEccccccccCCCCCC
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGF-QMGSFSVDCEAVDPVD 538 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~-~~~~~~~~~~~v~~~d 538 (586)
+.++....++.||++|-|+.+.+ |++.+|||++|+|||+...+++..-+. -|..++ +. .|
T Consensus 508 p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA------------~d 574 (631)
T 3q3e_A 508 PYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA------------NT 574 (631)
T ss_dssp CHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE------------SS
T ss_pred CHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec------------CC
Confidence 87777789999999999997654 999999999999999987666655443 233442 32 57
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 007873 539 VAAVSTTVRRALATYGTQALAEMMKNGMA 567 (586)
Q Consensus 539 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~ 567 (586)
.+++++...++.+| ++.+.+++++..+
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~ 601 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIE 601 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHH
Confidence 99999999999999 8888888887753
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.10 E-value=6.1e-06 Score=87.30 Aligned_cols=133 Identities=17% Similarity=0.096 Sum_probs=93.0
Q ss_pred CcEEEEEecC-ccccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 402 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 402 ~~~i~~iGrl-~~~KG~d~Ll~A~~~l~~~~v~lvIv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
..++++.|++ ...+..+.+++++..+ +.+++++ |.+... . ...+.++......+.. +++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3678888999 5888899999999876 4566554 765421 1 1234467655555543 46899999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCC--CCHHHHHHHHHHHHHhc
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 553 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~I~~ll~~~ 553 (586)
+|.. +-.++++|||++|+|+|+....+ ..+.+.+...|+.+ +. .++++++++|.++ ++
T Consensus 305 ~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 9973 22369999999999999997654 55667777788875 43 4899999999999 77
Q ss_pred CHHHHHHHHHHH
Q 007873 554 GTQALAEMMKNG 565 (586)
Q Consensus 554 ~~~~~~~~~~~~ 565 (586)
++.++++.+.+
T Consensus 369 -~~~~~~~~~~~ 379 (415)
T 1iir_A 369 -PETHARATAVA 379 (415)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 65555555543
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.036 Score=56.87 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=74.3
Q ss_pred HHHHHhCCCCCCCCcEEEEEecCccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEE-Eecc
Q 007873 389 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKF 465 (586)
Q Consensus 389 ~l~~~~gl~~~~~~~~i~~iGrl~~~KG~--d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~-~~~~ 465 (586)
.+.++.|++.++ ..+++..|.-.+.|.. +.+.+.+..|.+.+.+++++|... ..+..+++....+.++.. .+..
T Consensus 174 ~~l~~~g~~~~~-~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 174 EFYSSHGLTDTD-ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHHTTCCTTC-CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHHcCCCCCC-CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 344566775332 2344556654556654 678888888866678888888654 345566666655543333 3345
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCc
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 509 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~g 509 (586)
+-.++..+++.||++|.+- .|..-+ |.++|+|+|+--.+
T Consensus 251 sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg~ 289 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYGP 289 (349)
T ss_dssp CHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECSS
T ss_pred CHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEECC
Confidence 6677888999999999642 455555 89999999986433
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.014 Score=66.05 Aligned_cols=179 Identities=12% Similarity=-0.026 Sum_probs=116.8
Q ss_pred HHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC---CceEEEecc
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 465 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 465 (586)
|+.+|||.+. |+|..--...|=-+.++++..++.+ |+-+|++...... .++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~~~----v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPEDA----IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-GEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTTS----EEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-GHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCCC----EEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-HHHHHHHHHHhcCCCcCeEEECCCC
Confidence 5678888543 4443334457777777777777766 8999998876543 4566666666655 367777777
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHH
Q 007873 466 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 545 (586)
Q Consensus 466 ~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 545 (586)
+.++-...+..+|++|=|.-+ +-+.+.+||+.+|+|||+-....+..=+.. +++ -++.+...-..|.++..+.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~---s~l---~~~gl~e~ia~~~~~Y~~~ 661 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAA---SQL---TCLGCLELIAKNRQEYEDI 661 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHH---HHH---HHHTCGGGBCSSHHHHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHH---HHH---HHcCCcccccCCHHHHHHH
Confidence 777766789999999987665 458999999999999998764332221110 000 0000011123688999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHh
Q 007873 546 VRRALATYGTQALAEMMKNGM-----AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 546 I~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~~ 583 (586)
-.++.+| ++.+.++++.-. ..-|+-+..++.+++.+
T Consensus 662 a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 662 AVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLY 702 (723)
T ss_dssp HHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHH
Confidence 9999888 666655554432 23577777777776643
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.013 Score=59.61 Aligned_cols=114 Identities=16% Similarity=0.158 Sum_probs=75.8
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEec-CccccCHH--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC----Cc
Q 007873 386 LKEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EK 458 (586)
Q Consensus 386 ~~~~l~~~~gl~~~~~~~~i~~iGr-l~~~KG~d--~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~----~~ 458 (586)
..+.+++.+|++.+ ...+++..|. ..+.|... .+.+++..|.+.+++++++|... ..+..+++....+ .+
T Consensus 166 ~~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~ 242 (348)
T 1psw_A 166 EKSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccc
Confidence 34566777887532 2245566676 55667654 88888888866689999988654 3444555554433 13
Q ss_pred eEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 459 ARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 459 v~~~-~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
+... +..+-.++..+++.||++|... .|..-+ |.++|+|+|+--
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 4333 3445677788999999999865 344444 999999999864
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.022 Score=56.64 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=62.6
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
.++++.|..+...-.+.+++++... .. -.+|+|.+.+ ..+.+++...+.+ ++... .|. +.+.++|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~-~~~~l~~~~~~~~-~v~v~-~~~-~~m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNP-NLKKLQKFAKLHN-NIRLF-IDH-ENIAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCT-THHHHHHHHHTCS-SEEEE-ESC-SCHHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCch-HHHHHHHHHhhCC-CEEEE-eCH-HHHHHHHHHCCEEEE
Confidence 4566788776655455566665543 23 3466788865 3455666555444 45544 333 346679999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcC
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVAS 507 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~ 507 (586)
+ .|.++.|++++|+|.|.-.
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEEC
T ss_pred C-----CcHHHHHHHHcCCCEEEEe
Confidence 3 4689999999999998865
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.1 Score=55.49 Aligned_cols=134 Identities=14% Similarity=0.009 Sum_probs=78.7
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
.+.+..|..... ..+.+.+.+..|.+.+.+|+++-.+.. ....-+...++.++++....+.++ ..+|+.+++-++
T Consensus 275 vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~Pq---~~vL~h~~v~~f 349 (454)
T 3hbf_A 275 VVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWAPQ---VEILKHSSVGVF 349 (454)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSCCH---HHHHHSTTEEEE
T ss_pred eEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeCCH---HHHHhhcCcCeE
Confidence 455666776532 334444444444334666665433321 111001122334455665543343 268999995544
Q ss_pred cCCCCCCc-HHHHHHHHcCCcEEEcCCcC----cccccccC-cceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 483 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 483 PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
-+. || ++++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.++++++|++++++
T Consensus 350 vtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 350 LTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred Eec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 444 55 67999999999999986533 33455553 6787651 0135789999999999976
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.04 Score=58.76 Aligned_cols=142 Identities=11% Similarity=-0.029 Sum_probs=80.7
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEE-EeCCCh-hhHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GA 477 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~a 477 (586)
..+++..|..... ..+.+.+.+..|.+.++++++ +|.... ...+.+ ..+.+.++....+.+. . .+|+ .+
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~~w~pq-~--~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVVPWAPQ-A--EVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEESCCCH-H--HHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEecCCCH-H--HHhcCCcC
Confidence 3556667776643 344444444444333556554 454321 111111 1122345654443343 2 4788 67
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccC-cceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 478 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 478 Di~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
|++|. -+=.++++||+++|+|+|+-...+ ....+.+. +.|+.+. -..-+.++++++|++++++
T Consensus 345 ~~fvt----h~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 345 GAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred CEEEe----cCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 78883 233477999999999999987532 33455555 6777651 0124789999999999987
Q ss_pred cCHHHHHHHHHHH
Q 007873 553 YGTQALAEMMKNG 565 (586)
Q Consensus 553 ~~~~~~~~~~~~~ 565 (586)
++ .+++++++
T Consensus 413 --~~-~~~~r~~a 422 (456)
T 2c1x_A 413 --EK-GKKLRENL 422 (456)
T ss_dssp --HH-HHHHHHHH
T ss_pred --Cc-HHHHHHHH
Confidence 43 33444444
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.25 Score=55.79 Aligned_cols=188 Identities=11% Similarity=0.078 Sum_probs=106.2
Q ss_pred HhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccC--CcCCCCccccccccCccccccccHHHHHHH
Q 007873 313 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ--EWNPLTDKYIGVKYDASTVMDAKPLLKEAL 390 (586)
Q Consensus 313 ~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (586)
.....|.+++.|+...+.+.+ .++++.+ .++.-|..-. .+... .....++.+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~--~f~~~~~--------~i~~~G~PR~D~l~~~~----------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRS--AFWMDEE--------RILEIGYPRNDVLVNRA----------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHH--HTCCCGG--------GEEESCCGGGHHHHHST----------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHH--HhCCCcc--------eEEEcCCCchHHHhccc----------------chHHHHHHH
Confidence 345689999999999888875 3555433 2333444111 11111 122346678
Q ss_pred HHHhCCCCCCCCcEEEEEecCcccc----C-----HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 007873 391 QAEVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (586)
Q Consensus 391 ~~~~gl~~~~~~~~i~~iGrl~~~K----G-----~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~ 461 (586)
+++++++. ++++|+|.-.+.... | ...-++.+.+...++..+++-.- ......+ .+ ..+.+.+..
T Consensus 529 ~~~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~H--p~~~~~~-~~-~~~~~~~~~ 602 (729)
T 3l7i_A 529 RTHLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRMH--YLISNAL-DL-SGYENFAID 602 (729)
T ss_dssp HHHTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECCC--HHHHTTC-CC-TTCTTTEEE
T ss_pred HHHhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEecC--cchhccc-cc-cccCCcEEe
Confidence 89999874 458999998766531 1 11112333332235666666332 1111110 00 112223333
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC----------cCcccccccCcceEEEccccccc
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST----------GGLVDTVEEGFTGFQMGSFSVDC 531 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~----------gg~~e~v~~g~~G~~~~~~~~~~ 531 (586)
...+ +.+.+++..||++| --++-+++|++..++|||.-.- |-..+ +.+..-|-++
T Consensus 603 ~~~~--~di~~ll~~aD~lI-----TDySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~------- 667 (729)
T 3l7i_A 603 VSNY--NDVSELFLISDCLI-----TDYSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIY------- 667 (729)
T ss_dssp CTTC--SCHHHHHHTCSEEE-----ESSCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEE-------
T ss_pred CCCC--cCHHHHHHHhCEEE-----eechHHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeE-------
Confidence 3222 34567999999999 3588899999999999997731 11111 1111223333
Q ss_pred cCCCCCCHHHHHHHHHHHHHh
Q 007873 532 EAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 532 ~~v~~~d~~~la~~I~~ll~~ 552 (586)
.|.++|.++|......
T Consensus 668 -----~~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 668 -----TEPYGLAKELKNLDKV 683 (729)
T ss_dssp -----SSHHHHHHHHTTHHHH
T ss_pred -----CCHHHHHHHHhhhhcc
Confidence 6889999999988764
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=94.99 E-value=0.21 Score=53.38 Aligned_cols=142 Identities=6% Similarity=-0.059 Sum_probs=80.2
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEE-eCCC----h-hhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 476 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIv-G~g~----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 476 (586)
.+++..|.+.. ...+.+.+.+..|.+.+.+++++ |... . ...+.+ .+..++++.... |-.+. .+|+.
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~~~~v~~-~~pq~--~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF---TNEIADRGLIAS-WCPQD--KVLNH 369 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH---HHHHTTTEEEES-CCCHH--HHHTS
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH---HHhcCCCEEEEe-ecCHH--HHhcC
Confidence 45666677642 23444444444444446777654 4221 0 011122 222344566554 43332 48877
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccc-cCcceEEEccccccccCCCCCCHHHHHHHHHHHHH
Q 007873 477 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 551 (586)
Q Consensus 477 aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~ 551 (586)
+++-++=+. +=.++++||+++|+|+|+-...+ ....+. +-+.|+.+. ..-+.++++++|+++++
T Consensus 370 ~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 370 PSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVIA 438 (482)
T ss_dssp TTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHHT
T ss_pred CCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHHc
Confidence 665222222 33477999999999999987543 333343 456777650 23579999999999998
Q ss_pred hcCHHHHHHHHHHH
Q 007873 552 TYGTQALAEMMKNG 565 (586)
Q Consensus 552 ~~~~~~~~~~~~~~ 565 (586)
+ ++ .+++++++
T Consensus 439 ~--~~-~~~~r~~a 449 (482)
T 2pq6_A 439 G--DK-GKKMKQKA 449 (482)
T ss_dssp S--HH-HHHHHHHH
T ss_pred C--Cc-HHHHHHHH
Confidence 7 43 24455554
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=91.86 E-value=1.3 Score=46.98 Aligned_cols=138 Identities=12% Similarity=0.021 Sum_probs=75.3
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcc
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GAD 478 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aD 478 (586)
..+++..|.....-+.+.+.+++..|.+.+.++++ +|.+.+.+.+.+.+.... ++++.... |-.+. .+|+ .+|
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~v~~-w~pq~--~vL~h~~~~ 352 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL-EGKGMICG-WAPQV--EVLAHKAIG 352 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH-HCSEEEES-SCCHH--HHHHSTTEE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc-CCCEEEEc-cCCHH--HHhCCCccC
Confidence 35666777776222434444444444334677665 444311111111111100 23454443 43332 4776 677
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccc-cccCcceEEEccccccccCCC--CCCHHHHHHHHHHHHH
Q 007873 479 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALA 551 (586)
Q Consensus 479 i~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~~~~~~~~~~~~v~--~~d~~~la~~I~~ll~ 551 (586)
++|. =+=.++++||+++|+|+|+-...+ .... +.+-+.|+.+. +-..-. .-+.++++++|+++++
T Consensus 353 ~fvt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~----~~~~~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 353 GFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR----VDYRKGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp EEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC----SSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred eEEe----cCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe----cccCCCCccccHHHHHHHHHHHHh
Confidence 8874 233478999999999999987533 3334 45666777630 000001 3478999999999996
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=91.20 E-value=0.81 Score=45.81 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=84.2
Q ss_pred cEEEEEecCccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+++..|.=.+.|. .+.+.+.+..|.+.++++++.+.++. ..+..+++....+ ++...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~-e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH-EEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH-HHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH-HHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCCEE
Confidence 45556665555665 44888888888767889888743432 3344556655554 34444555667788899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc-CcceEEE-ccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~~~-~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
|..- .|..=+ |.+.|+|+|+--...-+..... +....++ +. .+| +..-+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~c--m~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GNE--LSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GGC--GGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--ccc--ccCCCHHHHHHHHHHHHHH
Confidence 9642 355555 7779999988642222222111 1111111 11 122 2445788999999888764
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=91.14 E-value=1.2 Score=47.37 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=75.5
Q ss_pred CcEEEEEecCccccCHHHHHHHHhhcccCCeEEEEE-eCCC-------------hhhHHHH-HHHHHHCCCceEEEeccC
Q 007873 402 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-------------KPMEKQL-EQLEILYPEKARGVAKFN 466 (586)
Q Consensus 402 ~~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIv-G~g~-------------~~~~~~l-~~l~~~~~~~v~~~~~~~ 466 (586)
..+.+..|.+.. ...+.+.+.+..|.+.+.+++++ |.+. ......+ +...++..++-.....|-
T Consensus 269 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~ 347 (480)
T 2vch_A 269 SVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWA 347 (480)
T ss_dssp CEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCC
T ss_pred ceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCcc
Confidence 356667777753 34455555555554456777654 4321 0000000 001111111112232243
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCcEEEcCCcC----ccccc-ccCcceEEEccccccccCCC-----
Q 007873 467 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVD----- 535 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~~v~----- 535 (586)
.+. .+|+.+++-++=+. || ++++||+++|+|+|+-...+ ....+ .+-+.|+.+ +
T Consensus 348 Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l----------~~~~~~ 412 (480)
T 2vch_A 348 PQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP----------RAGDDG 412 (480)
T ss_dssp CHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC----------CCCTTS
T ss_pred CHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEe----------ecccCC
Confidence 332 69999996433333 44 67999999999999987543 33343 455677754 3
Q ss_pred CCCHHHHHHHHHHHHH
Q 007873 536 PVDVAAVSTTVRRALA 551 (586)
Q Consensus 536 ~~d~~~la~~I~~ll~ 551 (586)
.-+.++++++|+++++
T Consensus 413 ~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 413 LVRREEVARVVKGLME 428 (480)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHhc
Confidence 2478999999999997
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=90.57 E-value=0.14 Score=48.92 Aligned_cols=66 Identities=15% Similarity=0.053 Sum_probs=44.1
Q ss_pred HHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCc--------ccccccCcceEEEccccccccCCCCCC
Q 007873 468 PLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD 538 (586)
Q Consensus 468 ~~~~~~l~-~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~~d 538 (586)
+.+..+|+ .||++|. =+=..+++|++++|+|.|.-..... .+.+.+...++++ +
T Consensus 123 ~~m~~~l~~~AdlvIs----haGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~-------------~ 185 (224)
T 2jzc_A 123 TKMQSIIRDYSDLVIS----HAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC-------------A 185 (224)
T ss_dssp SSHHHHHHHHCSCEEE----SSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE-------------C
T ss_pred chHHHHHHhcCCEEEE----CCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc-------------C
Confidence 34567999 9999994 2345789999999999988765431 2233333334432 4
Q ss_pred HHHHHHHHHHHH
Q 007873 539 VAAVSTTVRRAL 550 (586)
Q Consensus 539 ~~~la~~I~~ll 550 (586)
++.|+++|.++.
T Consensus 186 ~~~L~~~i~~l~ 197 (224)
T 2jzc_A 186 PTETGLIAGLRA 197 (224)
T ss_dssp SCTTTHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566777777763
|
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=83.78 E-value=17 Score=30.38 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=70.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHH----hccEEEEcCCC-CCCcHHHHHHHHc---CCcE
Q 007873 432 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 503 (586)
Q Consensus 432 v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~----~aDi~l~PS~~-E~~gl~~lEAma~---G~Pv 503 (586)
.+++|+.+.+ .....++.+....+..+. ..-+.+++...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVL--TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEE--EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4677777654 345566666666553332 3335555555555 56888876553 4567777766643 6777
Q ss_pred EEcCCcC----cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 504 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 504 I~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
|.-.... ..+.+..|..+++. .|.++++|.++|.+++..
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLR----------KPVTAQDLSIAINNAINR 123 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHhCcceeEe----------CCCCHHHHHHHHHHHHHH
Confidence 6543222 34456678899998 999999999999999875
|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=82.50 E-value=21 Score=29.94 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=73.1
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--ccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007873 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY-----GTV 502 (586)
Q Consensus 431 ~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDi~l~PS~~-E~~gl~~lEAma~-----G~P 502 (586)
..+++|+.+.. .....++++....+........-+..++...+.. .|++++-... +.-|+.+++.+.. .+|
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 46777887654 3455666666665543323333356666555544 5788775543 4467888888765 577
Q ss_pred EEEcCCcC----cccccccCcceEEEccccccccCCCCC-CHHHHHHHHHHHHHh
Q 007873 503 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 552 (586)
Q Consensus 503 vI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~-d~~~la~~I~~ll~~ 552 (586)
+|+-.... ..+.+..|..+++. .|. ++++|.++|.++++.
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVD----------KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEE----------CCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCcHHHHHHHHHHHHHH
Confidence 76654322 33455678899998 999 999999999999875
|
| >3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=82.32 E-value=18 Score=30.09 Aligned_cols=109 Identities=13% Similarity=0.139 Sum_probs=71.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--ccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007873 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY-----GTV 502 (586)
Q Consensus 431 ~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDi~l~PS~~-E~~gl~~lEAma~-----G~P 502 (586)
..+++|+.+... ....++++..+.+..+ ...-+.+++...+.. .|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~iLivdd~~~-~~~~l~~~l~~~g~~v--~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDPD-IARLLNLMLEKGGFDS--DMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCHH-HHHHHHHHHHHTTCEE--EEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCHH-HHHHHHHHHHHCCCeE--EEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 457777776543 4555556555555333 223355555555543 4888876553 4567888888765 678
Q ss_pred EEEcCCcC----cc-cccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 503 PIVASTGG----LV-DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 503 vI~s~~gg----~~-e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
+|.-.... .. +....|..+++. .|.++++|.++|.++++.
T Consensus 83 ii~~s~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPLAVSTWLE----------KPIDENLLILSLHRAIDN 127 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTTCCCEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhcCCCEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 86654332 22 556678889987 999999999999999986
|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} | Back alignment and structure |
|---|
Probab=81.89 E-value=20 Score=30.16 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CC
Q 007873 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 501 (586)
Q Consensus 430 ~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDi~l~PS~~-E~~gl~~lEAma~-----G~ 501 (586)
...+++|+.+... ....+.+.....+ ......-+..++...+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 7 ~~~~iLivd~~~~-~~~~l~~~L~~~g--~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 83 (147)
T 2zay_A 7 KWWRIMLVDTQLP-ALAASISALSQEG--FDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASI 83 (147)
T ss_dssp -CEEEEEECTTGG-GGHHHHHHHHHHT--EEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTS
T ss_pred CCceEEEEeCCHH-HHHHHHHHHHHcC--CeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCC
Confidence 3567888887653 3334444433333 22223334555544443 36888876544 4567888888764 57
Q ss_pred cEEEcC-CcC---cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 502 VPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 502 PvI~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
|+|+-. ... ..+.+..|..+++. .|.++++|.+.|.+++..
T Consensus 84 pii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 84 PVIALSGRATAKEEAQLLDMGFIDFIA----------KPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp CEEEEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 776543 222 23345678889998 999999999999999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 586 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 8e-99 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-36 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-08 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 2e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 306 bits (785), Expect = 8e-99
Identities = 161/493 (32%), Positives = 236/493 (47%), Gaps = 33/493 (6%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
N+L V +E+ P KTGGL DV+G LP AL A+G R T+ P Y K A V
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFT 61
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
EK +D + +D P + + G Y +TG+DY DN RF+ L
Sbjct: 62 DLLGEKADLLEVQHERLDLLILDAPAYYERSGG-----PYLGQTGKDYPDNWKRFAALSL 116
Query: 206 AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265
AA + P + A+DW ++ P Y++ P+ + I
Sbjct: 117 AAARIGAGVL---------PGWRPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTI 162
Query: 266 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325
HNIA+QG+F F L LPA G ++++K G+ + + TVSP
Sbjct: 163 HNIAFQGQFGANIFSKLALPAHA-------FGMEGIEYYNDVSFLKGGLQTATALSTVSP 215
Query: 326 HYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 383
YA+E+++ E G+ L+ +I R + GIVNG+D WNP TD I Y A + +
Sbjct: 216 SYAEEILTAE-FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSA-ANLKNR 273
Query: 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 443
L K+A+ + D P+ I RL QKG D++A A+ + +++VLG G
Sbjct: 274 ALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVA 332
Query: 444 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 503
+E L + + +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P
Sbjct: 333 LEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIP 392
Query: 504 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMM 562
+VA TGGL DTV + + PV + + +RR + Y L +M
Sbjct: 393 VVARTGGLADTVIDANHAALASK-AATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQ 451
Query: 563 KNGMAQDLSWKVS 575
K GM D+SW+ S
Sbjct: 452 KLGMKSDVSWEKS 464
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 138 bits (346), Expect = 5e-36
Identities = 103/497 (20%), Positives = 177/497 (35%), Gaps = 86/497 (17%)
Query: 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKV 145
+L +G E P K GGL + L + ALA+ GH V+ P + +++ + +V
Sbjct: 2 KVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKI----RV 56
Query: 146 GDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ 205
+ +V+ + + + + ++ +YGP + + +
Sbjct: 57 FGEEVQVKVSYEERGNLRIYRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGR 105
Query: 206 AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCI 265
A++ L DVV +DWHT +K +K VF I
Sbjct: 106 ASVLLLNDLLREEPLP-------DVVH-FHDWHTVFAGALIKKYFKI-------PAVFTI 150
Query: 266 HNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 325
H + AF + G ++ I+ G +D+V TVS
Sbjct: 151 HRLNKSKLPAF---------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSR 195
Query: 326 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 385
Y + + I + NG+D WN S + ++
Sbjct: 196 GYLIDEWG--------FFRNFEGKITYVFNGIDCSFWNE------------SYLTGSRDE 235
Query: 386 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL----AAAIPHFIKENVQIIVLGTGK 441
K++L ++ G+ IG R QKG D+L + ++ I++G G
Sbjct: 236 RKKSLLSKFGMDEGVTFMFIGRFDR--GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD 293
Query: 442 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT 501
+E LE + + + DF++IPS FEP GL+ L AM G
Sbjct: 294 PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA 353
Query: 502 VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 561
+PI ++ GGL D + TG V D ++ + +AL L++
Sbjct: 354 IPIASAVGGLRDIITNE-TGI----------LVKAGDPGELANAILKALELS-RSDLSKF 401
Query: 562 MKNG--MAQDLSWKVSI 576
+N A SW+ S
Sbjct: 402 RENCKKRAMSFSWEKSA 418
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 55.3 bits (132), Expect = 1e-08
Identities = 43/368 (11%), Positives = 98/368 (26%), Gaps = 84/368 (22%)
Query: 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ 287
+D++++ D+H L+ + ++ F +H
Sbjct: 123 DDIIWIH-DYHLLPFAHELRKRGV------NNRIGFFLHI-------------------P 156
Query: 288 FKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 347
F + F P + + + + D++ + + + + K
Sbjct: 157 FPTPEIFN---ALPTY----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK 209
Query: 348 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGF 407
+ G + IG++ A PL + Q + +N+ I
Sbjct: 210 SHT---AWGKAFRTEVY----PIGIEPKEIAKQAAGPLPPKLAQLK---AELKNVQNIFS 259
Query: 408 IGRLEEQKGSDILAAAIPHFIKENVQI---IVLGTGKKPMEKQLEQLEILYPEKARGVAK 464
+ RL+ KG A +++ Q I ++ + + + +
Sbjct: 260 VERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGR 319
Query: 465 FN-------------------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT---- 501
N L I +D L+ + L+ +
Sbjct: 320 INGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANP 379
Query: 502 -VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 560
V +++ G + + V+P D V+ + RAL T
Sbjct: 380 GVLVLSQFAGAANELTSALI-------------VNPYDRDEVAAALDRAL-TMSLAERIS 425
Query: 561 MMKNGMAQ 568
+
Sbjct: 426 RHAEMLDV 433
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 52.1 bits (123), Expect = 2e-08
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE-Q 414
G+D WN S + ++ K++L ++ G+ FIGR + Q
Sbjct: 1 GIDCSFWNE------------SYLTGSRDERKKSLLSKFGMDEG---VTFMFIGRFDRGQ 45
Query: 415 KGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 470
KG D+L AI + ++ I++G G +E LE + +
Sbjct: 46 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFV 105
Query: 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 530
+ DF++IPS FEP GL+ L AM G +PI ++ GGL D +
Sbjct: 106 RELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET----------- 154
Query: 531 CEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 572
V D ++ + +AL L++ +N + +S+
Sbjct: 155 GILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 586 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.95 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.46 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.36 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.08 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.92 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.9 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.89 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.56 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.4 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.98 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.62 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.59 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.53 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.47 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 93.31 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 87.55 | |
| d2d1pa1 | 128 | tRNA 2-thiouridine synthesizing protein D, TusD {E | 83.05 | |
| d1a04a2 | 138 | Nitrate/nitrite response regulator (NarL), receive | 82.78 | |
| d2hy5a1 | 130 | Sulfurtransferase DsrE {Chromatium vinosum [TaxId: | 82.16 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 81.43 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2.8e-59 Score=507.92 Aligned_cols=461 Identities=35% Similarity=0.551 Sum_probs=380.1
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
|||++|+.+|+|+.++||+|+++.+|+++|+++||+|+|++|.|+.....+.......-........++.++...+|+++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 80 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL 80 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence 99999999999988899999999999999999999999999998766555443333222222222345667778899999
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+++++|.++.+.+ .+|.+..+.+|.++..++..+++++.++++.+.. .++|| |||+|+|++++.+.
T Consensus 81 ~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~pD-IvH~h~~~~~l~~~ 146 (477)
T d1rzua_ 81 LILDAPAYYERSG-----GPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLP--------GWRPD-MVHAHDWQAAMTPV 146 (477)
T ss_dssp EEEECHHHHCSSS-----CSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSS--------SCCCS-EEEEEHHHHTTHHH
T ss_pred EEecChhhcccCC-----CcccCcccccccccHHHHHHHHHHHHhhhhhccc--------CCCCC-EEEecchhHHHHHH
Confidence 9999999887643 5677778888999999999999998887776432 35799 99999999999998
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
+++.... .++|+|+|+|+..++..++...+..++.+...... ..........+++..+..+|.++++|
T Consensus 147 ~~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ad~~~~vs 214 (477)
T d1rzua_ 147 YMRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM-------EGIEYYNDVSFLKGGLQTATALSTVS 214 (477)
T ss_dssp HHHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST-------TTTEETTEEEHHHHHHHHCSEEEESC
T ss_pred HHHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhccc-------ccccccchhHHHHHHHHhhhhhhhcc
Confidence 8775542 58999999999988888777777666655543221 11111234567788889999999999
Q ss_pred HHHHHHHhcCccCCCcchhhh--hccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCC
Q 007873 325 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 402 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 402 (586)
+.+++++... .+|...+.+. +..++.+|+||+|.+.|+|...++|...++.... .....++.+++...+++. ++.
T Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~ 291 (477)
T d1rzua_ 215 PSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDD-DGS 291 (477)
T ss_dssp HHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCC-SSS
T ss_pred HHHHHHHHHH-hcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhH-HHhhhhHHHHHHhccccc-CCc
Confidence 9999887642 2344333333 2358999999999999999988888877766654 455667788899999964 467
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
++|+|+||+.++||++.|++|++++.+.+.+|+++|.|+......+.++...+++++.+.+.++.++.+.++++||++|+
T Consensus 292 ~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~ 371 (477)
T d1rzua_ 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (477)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred cEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccC
Confidence 89999999999999999999999988889999999999987888888888889999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCc---------ceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~---------~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
||++|+||++++|||+||+|||+|++||++|+|.|+. +|++| ++.|+++|+++|.++++.+
T Consensus 372 PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~----------~~~d~~~la~ai~~~l~~~ 441 (477)
T d1rzua_ 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441 (477)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHHH
T ss_pred CccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEe----------CCCCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999998875 89998 9999999999999998743
Q ss_pred -CHHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q 007873 554 -GTQALAEMMKNGMAQDLSWKVSIGTVQEEDS 584 (586)
Q Consensus 554 -~~~~~~~~~~~~~~~~fsw~~~a~~~~~~~~ 584 (586)
.++.+++|++++++++|||+.++++|++.++
T Consensus 442 ~~~~~~~~~~~~a~~~~fsw~~~a~~~~~lY~ 473 (477)
T d1rzua_ 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYS 473 (477)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 2788999999999999999999999998764
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=5.9e-46 Score=394.99 Aligned_cols=418 Identities=24% Similarity=0.339 Sum_probs=309.5
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEEEEEecCCCccccCCcceEEEEEeCCeeeEEEEEEEEeCCceE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (586)
||||+++.+|+|. ++||+++++..|+++|+++||+|+|+||.++.+.. .....+.................++.+
T Consensus 1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (437)
T d2bisa1 1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQG----EEIGKIRVFGEEVQVKVSYEERGNLRI 75 (437)
T ss_dssp CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCC----EEEEEEECSSSEEEEEEEEEEETTEEE
T ss_pred CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccch----hhccceeecccccceeeeeeccCCeEE
Confidence 9999999999995 68999999999999999999999999998765443 222333333333344455566778888
Q ss_pred EEEcCccccccccCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHHhHhhcccCCCCCCCCCCCCEEEEecCCccchHHH
Q 007873 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 244 (586)
Q Consensus 165 ~~v~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvii~~h~~~~~~~~~ 244 (586)
+.+..+.+... ..|.+ .+.....+...++++....+..+... ...|| |||+|+|.+++++.
T Consensus 76 ~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~pD-iIh~~~~~~~~~~~ 136 (437)
T d2bisa1 76 YRIGGGLLDSE-------DVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE-------EPLPD-VVHFHDWHTVFAGA 136 (437)
T ss_dssp EEEESSGGGCS-------CTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTS-------SCCCS-EEEEETGGGHHHHH
T ss_pred EecCccccccc-------ccccc----chhhHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-EEEECChhhhhHhh
Confidence 88876544321 22221 12223333444556655555544221 12589 99999999988887
Q ss_pred HHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcchhhhhHHhhcCCEEEEeC
Q 007873 245 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 324 (586)
Q Consensus 245 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS 324 (586)
++++. .++|+++++|+..+.. ++...+...+++. .........++.....+|.+++++
T Consensus 137 ~~~~~-------~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~d~v~~~~ 194 (437)
T d2bisa1 137 LIKKY-------FKIPAVFTIHRLNKSK-LPAFYFHEAGLSE--------------LAPYPDIDPEHTGGYIADIVTTVS 194 (437)
T ss_dssp HHHHH-------HCCCEEEEESSCCCCC-EEHHHHHHTTCGG--------------GCCSSEECHHHHHHHHSSEEEESC
T ss_pred hhhcc-------ccCceeEEEeeccccc-cchhhhhhccchh--------------hhhHHHHHHHHHHHHhhhhhcccc
Confidence 87776 4899999999876522 1111111111111 111233455677788899999999
Q ss_pred HHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcE
Q 007873 325 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 404 (586)
Q Consensus 325 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 404 (586)
+....+.... ++.. ..++.+|+||+|.+.|.|.... ..+...+..++.++++. +.++
T Consensus 195 ~~~~~~~~~~--~~~~------~~ki~vi~~g~d~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~~~~ 251 (437)
T d2bisa1 195 RGYLIDEWGF--FRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVT 251 (437)
T ss_dssp HHHHHHTHHH--HGGG------TTTEEECCCCCCTTTSCGGGCC------------SCHHHHHHHHHHHTTCC---SCEE
T ss_pred hhhhhhhhhh--hccc------cCceEEEecccccccccccccc------------hhhHHHHHhhhhhhhcc---CCce
Confidence 9888765531 2222 3489999999999988765321 33455577788888886 4589
Q ss_pred EEEEecCc-cccCHHHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007873 405 IGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 479 (586)
Q Consensus 405 i~~iGrl~-~~KG~d~Ll~A~~~l~~----~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi 479 (586)
|+|+||+. ++||++.+++|+..+.. ++++|+|+|.|+...+..++.+....+..+...+..+.+.+..+++.||+
T Consensus 252 i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi 331 (437)
T d2bisa1 252 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 331 (437)
T ss_dssp EEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSE
T ss_pred EEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccCcHHHHHHHHhhhcc
Confidence 99999996 57999999999998743 58999999999877777888887777665555555578889999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHH
Q 007873 480 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 559 (586)
Q Consensus 480 ~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 559 (586)
+++||..|++|++++|||+||+|||+++.||..|++.+ .+|+++ ++.|+++|+++|.+++++. ++.++
T Consensus 332 ~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~----------~~~d~~~la~~i~~ll~~~-~~~~~ 399 (437)
T d2bisa1 332 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDLS 399 (437)
T ss_dssp EEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHTTT-TSCTH
T ss_pred ccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEE----------CCCCHHHHHHHHHHHHhCC-HHHHH
Confidence 99999999999999999999999999999999999886 589998 9999999999999999742 56778
Q ss_pred HHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 560 EMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 560 ~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
+|++++. +++|||++++++|++.+
T Consensus 400 ~~~~~~~~~~~~~s~~~~a~~~~~iY 425 (437)
T d2bisa1 400 KFRENCKKRAMSFSWEKSAERYVKAY 425 (437)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 8888874 56899999999999865
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.3e-36 Score=311.26 Aligned_cols=225 Identities=15% Similarity=0.181 Sum_probs=177.4
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccCCcCCCCccccccccCccccccccHHHHHHHHHHh
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 394 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 394 (586)
..++.+++.++...+++.+ .++++.+ ++.+||||+|+..+.+.. .+..++.++..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~--~~~~~~~------~i~vi~~gv~~~~~~~~~----------------~~~~~~~~r~~~ 189 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQ----------------IPNSREIYRQKN 189 (370)
T ss_dssp TCCCEEEESCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGS----------------CTTHHHHHHHHT
T ss_pred ccCceEEEecHHHHHHHHH--hcCCCcc------eEEEEEeecccccccccC----------------chhhhhhhhhcc
Confidence 3678999999999888775 2455544 899999999987765432 123467788999
Q ss_pred CCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCC--CceEEEeccChHHH
Q 007873 395 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLA 470 (586)
Q Consensus 395 gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 470 (586)
|++. +.++|+++||+.++||++.+++|+.++.+ ++..++++|+++. .+.++++..+++ .++.+.+.. +++
T Consensus 190 ~~~~--~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~--~~~~~~~~~~~~~~~~v~~~g~~--~~~ 263 (370)
T d2iw1a1 190 GIKE--QQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK--PRKFEALAEKLGVRSNVHFFSGR--NDV 263 (370)
T ss_dssp TCCT--TCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--CHHHHHHHHHHTCGGGEEEESCC--SCH
T ss_pred CCCc--cceEEEEEeccccccchhhhcccccccccccccceeeecccccc--ccccccccccccccccccccccc--ccc
Confidence 9875 44899999999999999999999999976 5666666665542 234455555443 356666543 346
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 471 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 471 ~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
.++|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++|+++|.+++
T Consensus 264 ~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~---------~~~~d~~~la~~i~~ll 334 (370)
T d2iw1a1 264 SELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI---------AEPFSQEQLNEVLRKAL 334 (370)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE---------CSSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEE---------cCCCCHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999865 37899999999999999
Q ss_pred HhcCHHHHHHHHHHHH--HhcC---CHHHHHHHHH
Q 007873 551 ATYGTQALAEMMKNGM--AQDL---SWKVSIGTVQ 580 (586)
Q Consensus 551 ~~~~~~~~~~~~~~~~--~~~f---sw~~~a~~~~ 580 (586)
+| ++.+++|+++|+ .+.| +|.+.+.+++
T Consensus 335 ~d--~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 335 TQ--SPLRMAWAENARHYADTQDLYSLPEKAADII 367 (370)
T ss_dssp HC--HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 98 899999999985 3444 5555554443
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.95 E-value=3.3e-27 Score=224.16 Aligned_cols=189 Identities=28% Similarity=0.449 Sum_probs=160.9
Q ss_pred CcccCCcCCCCccccccccCccccccccHHHHHHHHHHhCCCCCCCCcEEEEEecCc-cccCHHHHHHHHhhccc----C
Q 007873 356 GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK----E 430 (586)
Q Consensus 356 gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~----~ 430 (586)
|+|++.|.|.... ..+...+..+++++|++ +.++|+|+||+. ++||++.+++|++.+.+ +
T Consensus 1 gid~~~~~~~~~~------------~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~ 65 (196)
T d2bfwa1 1 GIDCSFWNESYLT------------GSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ 65 (196)
T ss_dssp CCCTTTSSGGGSC------------SCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG
T ss_pred CcChhhcCCCCCC------------chhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCC
Confidence 7899999876421 34456688899999996 557899999997 59999999999998853 6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC
Q 007873 431 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 510 (586)
Q Consensus 431 ~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg 510 (586)
+++|+|+|+|+..++..++.+...++..+...+..+.+++..+|+.||++|+||+.|+||++++|||+||+|||+++.|+
T Consensus 66 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 66 EMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred CeEEEEEeecccchhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 89999999998778888888888877655555666788899999999999999999999999999999999999999999
Q ss_pred cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCC
Q 007873 511 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLS 571 (586)
Q Consensus 511 ~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs 571 (586)
+.|++.+ .+|+++ +++|+++++++|.++++.. ++.+.+|+++|+ +++||
T Consensus 146 ~~e~i~~-~~g~~~----------~~~~~~~l~~~i~~~l~~~-~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-ETGILV----------KAGDPGELANAILKALELS-RSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-TTCEEE----------CTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-CceeeE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhCC
Confidence 9999876 589998 9999999999999999842 778889999886 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.2e-23 Score=222.75 Aligned_cols=291 Identities=14% Similarity=0.088 Sum_probs=208.7
Q ss_pred CCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcch
Q 007873 228 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 307 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 307 (586)
-| +|+.||++..++|.+++... .++++++.+|...+.. ..|..+ ...
T Consensus 123 ~d-~iwvhDyhl~llp~~lR~~~------~~~~i~~flH~pfP~~----~~fr~l----------------------p~~ 169 (456)
T d1uqta_ 123 DD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNAL----------------------PTY 169 (456)
T ss_dssp TC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTTS----------------------TTH
T ss_pred CC-eEEEeccchhhhHHHHHHhC------CCCcEEEEeCCCCCCh----HHhccC----------------------cch
Confidence 36 99999999999999999875 6899999999654310 011110 112
Q ss_pred hhhhHHhhcCCEEEEeCHHHHHHHhcCc--cCCCcch--hhh----hccCeeEecCCcccCCcCCCCccccccccCcccc
Q 007873 308 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD--NII----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 379 (586)
Q Consensus 308 ~~~~~~~~~ad~vitvS~~~~~~l~~~~--~~g~~~~--~~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 379 (586)
..+..++..+|.|...+..++..+.... ..+.... ..+ +..++.++|+|+|+..|.+....
T Consensus 170 ~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~----------- 238 (456)
T d1uqta_ 170 DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG----------- 238 (456)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS-----------
T ss_pred HHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhccc-----------
Confidence 4456677899999999998887765311 0111100 000 12478899999999887542211
Q ss_pred ccccHHHHHHHHHHhCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc------CCeEEEEEeCCCh-------hhHH
Q 007873 380 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKK-------PMEK 446 (586)
Q Consensus 380 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~------~~v~lvIvG~g~~-------~~~~ 446 (586)
........++++++ +.++|+++||+++.||++.+++|+.++.+ .++.++.+|.+.. .+..
T Consensus 239 --~~~~~~~~l~~~~~-----~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ 311 (456)
T d1uqta_ 239 --PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRH 311 (456)
T ss_dssp --CCCHHHHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHH
T ss_pred --HHHHHHHHHHHhcC-----CCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHH
Confidence 11112334555443 56899999999999999999999999855 2578888887641 2333
Q ss_pred HHHHHHHHC---------CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc-----EEEcCCcCcc
Q 007873 447 QLEQLEILY---------PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-----PIVASTGGLV 512 (586)
Q Consensus 447 ~l~~l~~~~---------~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~P-----vI~s~~gg~~ 512 (586)
+++++..+. ...+......+.+++..+++.||++++||..|+||++++|||+||+| +|+|+.+|..
T Consensus 312 ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~ 391 (456)
T d1uqta_ 312 QLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 391 (456)
T ss_dssp HHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG
T ss_pred HHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH
Confidence 444443321 12344555567888889999999999999999999999999999999 8999999999
Q ss_pred cccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHh
Q 007873 513 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKVSIGTVQEED 583 (586)
Q Consensus 513 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~~ 583 (586)
+.+.+ |+++ +|.|++++|++|.++|+++ ++.++++.++++ ...+|+..-++.+++..
T Consensus 392 ~~l~~---g~lV----------nP~d~~~~A~ai~~aL~~~-~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l 450 (456)
T d1uqta_ 392 NELTS---ALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDL 450 (456)
T ss_dssp GTCTT---SEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHhCC---eEEE----------CcCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 99964 7887 9999999999999999863 456666666654 35788888888877654
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=4.2e-22 Score=183.45 Aligned_cols=138 Identities=15% Similarity=0.225 Sum_probs=121.4
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC--hhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
..++|+||+.++||++.+++|++++ ++.+++|+|.+. ...+...+++.....+++.+.+..+.+++..+|+.||++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 90 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL 90 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence 4578999999999999999999998 578889999765 234445555555555689999988999999999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHhc
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 553 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 553 (586)
++||+.|+||++++|||++|+|||+++.+++.|++.++.+|+++ + .|+++++++|.++++++
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~----------~-~d~~~~~~~i~~l~~~~ 152 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV----------N-ADVNEIIDAMKKVSKNP 152 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE----------C-SCHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccccccccceeecCCcceeeecCCcccccC----------C-CCHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999975 4 58999999999999983
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=1.1e-11 Score=136.67 Aligned_cols=295 Identities=16% Similarity=0.149 Sum_probs=186.7
Q ss_pred CCEEEEecCCccchHHHHHHhh-ccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccCCChh----------
Q 007873 228 EDVVFVANDWHTSLIPCYLKTM-YKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQ---------- 287 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~l~~~-~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~~---------- 287 (586)
++ ++|.||-|++++.+-+-.. ....|+ .....++||.|...+.| .|+.+.+..+ +|..
T Consensus 300 ~~-vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~-l~~~~~~i~~i~~~ 377 (796)
T d1l5wa_ 300 YE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHMQIINEINTR 377 (796)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred hh-hhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHH-hHHHHHHHhHhhHH
Confidence 56 9999999988766543322 111121 12467899999987655 3444333221 1110
Q ss_pred hccccccccCCC-------CCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCCcccC
Q 007873 288 FKSSFDFIDGYN-------KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ 360 (586)
Q Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ngvd~~ 360 (586)
|........+.+ .......+++...++..|..+..||+-..+.+.+.. +.. -.-+-+.++.-|.|||.+.
T Consensus 378 fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~-~~~--~~~~~p~~i~~ITNGVh~~ 454 (796)
T d1l5wa_ 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL-FPE--YHQLWPNKFHNVTNGITPR 454 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT-SHH--HHHHCGGGEEECCCCBCHH
T ss_pred HHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHHHHHHh-hhh--ccccCCcccccccccccHH
Confidence 000000000000 000112456667788899999999998877655411 100 0001134899999999998
Q ss_pred CcCCCCcc--------cccc-------------ccCc-----cccccccHHHH----HHHHHHhCCCCCCCCcEEEEEec
Q 007873 361 EWNPLTDK--------YIGV-------------KYDA-----STVMDAKPLLK----EALQAEVGLPVDRNIPVIGFIGR 410 (586)
Q Consensus 361 ~~~p~~~~--------~~~~-------------~~~~-----~~~~~~~~~~~----~~l~~~~gl~~~~~~~~i~~iGr 410 (586)
.|-..... ++.- ++.. ....+.+..+| +.++++.|...+++..+++|+-|
T Consensus 455 ~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRR 534 (796)
T d1l5wa_ 455 RWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKR 534 (796)
T ss_dssp HHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESC
T ss_pred HHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhh
Confidence 88432110 1100 0000 00111222222 34466778888889999999999
Q ss_pred CccccCHHHHHHHHh----hccc------CCeEEEEEeCCCh------hhHHHHHHHHHHC---C-----CceEEEeccC
Q 007873 411 LEEQKGSDILAAAIP----HFIK------ENVQIIVLGTGKK------PMEKQLEQLEILY---P-----EKARGVAKFN 466 (586)
Q Consensus 411 l~~~KG~d~Ll~A~~----~l~~------~~v~lvIvG~g~~------~~~~~l~~l~~~~---~-----~~v~~~~~~~ 466 (586)
+.++|..++++.-+. .+.. .+++||+.|+..+ ...+.+.+++... + .+|.+...++
T Consensus 535 fa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYd 614 (796)
T d1l5wa_ 535 LHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYC 614 (796)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCC
T ss_pred hhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCc
Confidence 999999998544333 3332 2699999998542 3444455554421 1 1688999999
Q ss_pred hHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEccc
Q 007873 467 IPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 527 (586)
Q Consensus 467 ~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~ 527 (586)
...+..++.+||+.+..++ +|.+|.+-+-||..|.+.+++--|...|+..+ +.|||+||..
T Consensus 615 v~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~~ 679 (796)
T d1l5wa_ 615 VSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHT 679 (796)
T ss_dssp HHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred hHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecCc
Confidence 9999999999999999997 59999999999999999999999999999875 7899999844
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.36 E-value=2.2e-10 Score=126.06 Aligned_cols=308 Identities=18% Similarity=0.177 Sum_probs=195.1
Q ss_pred CCEEEEecCCccchHHHH-HHhhccCCCC-------CCCceEEEEEcCCcccc--ccCcccccccCCCh----------h
Q 007873 228 EDVVFVANDWHTSLIPCY-LKTMYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------Q 287 (586)
Q Consensus 228 pDvii~~h~~~~~~~~~~-l~~~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~----------~ 287 (586)
++ ++|.||-|++++.+- ++......|+ .....++||.|.+.+.+ .|+.+.+..+ +|. .
T Consensus 321 ~~-vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~-lpr~~~ii~ei~~~ 398 (824)
T d2gj4a1 321 KV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQR 398 (824)
T ss_dssp HE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred cc-eeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHH-hHHHhhhhhhhHHH
Confidence 44 899999998876654 3322222221 11346899999987655 3544433221 111 1
Q ss_pred hccc--------------cccccCCCCCcCCcchhhhhHHhhcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEe
Q 007873 288 FKSS--------------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 353 (586)
Q Consensus 288 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI 353 (586)
|... +..++.. ....+++...++..|..+..||.-..+-+.+.. + ..-.-+-+.++.-|
T Consensus 399 fl~~~~~~~~~d~~~~~~l~ii~e~----~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~-~--~~~~~~~p~ki~~i 471 (824)
T d2gj4a1 399 FLNRVAAAFPGDVDRLRRMSLVEEG----AVKRINMAHLCIAGSHAVNGVARIHSEILKKTI-F--KDFYELEPHKFQNK 471 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECS----SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTT-T--HHHHHHCGGGEEEC
T ss_pred HHHHHHHHCCCcHHHHhhccccccc----CCceeeHHHHHHHhchhHHHHHHHHHHHHHHhh-c--cccccCCCcceecc
Confidence 1100 0000000 112356667788899999999998877666421 0 00001123489999
Q ss_pred cCCcccCCcCCCCccccc---------------------ccc-Ccc----ccccccHHHHH----HHHHHhCCCCCCCCc
Q 007873 354 VNGMDVQEWNPLTDKYIG---------------------VKY-DAS----TVMDAKPLLKE----ALQAEVGLPVDRNIP 403 (586)
Q Consensus 354 ~ngvd~~~~~p~~~~~~~---------------------~~~-~~~----~~~~~~~~~~~----~l~~~~gl~~~~~~~ 403 (586)
.|||.+..|-....+.+. ..| +++ ...+.+..+|. .++++.|...+++..
T Consensus 472 TNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~l 551 (824)
T d2gj4a1 472 TNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSL 551 (824)
T ss_dssp CCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSE
T ss_pred cCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchh
Confidence 999999999532211110 011 111 11122333333 356677888888999
Q ss_pred EEEEEecCccccCHHHHH----HHHhhccc------CCeEEEEEeCCC------hhhHHHHHHHHHH---CC-----Cce
Q 007873 404 VIGFIGRLEEQKGSDILA----AAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEIL---YP-----EKA 459 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll----~A~~~l~~------~~v~lvIvG~g~------~~~~~~l~~l~~~---~~-----~~v 459 (586)
.++++-|+.++|...+.+ ..+.++++ .+++||+.|+.. +...+.+.+++.. .+ .+|
T Consensus 552 fd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkV 631 (824)
T d2gj4a1 552 FDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRV 631 (824)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEE
T ss_pred hhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeE
Confidence 999999999999998833 23344433 379999999854 2344455555431 11 158
Q ss_pred EEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCCcCccccccc--CcceEEEccccccccC--
Q 007873 460 RGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEA-- 533 (586)
Q Consensus 460 ~~~~~~~~~~~~~~l~~aDi~l~PS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~~~-- 533 (586)
.+...++...+..++.+||+.+..|+ .|.+|..-+-+|..|.+.+++-.|...|+.++ +.|||.||....+.+.
T Consensus 632 vFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ev~~~~ 711 (824)
T d2gj4a1 632 IFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLD 711 (824)
T ss_dssp EEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHH
T ss_pred EEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCChhhhhHHh
Confidence 89999999999999999999999998 59999999999999999999999999998875 7899999965544322
Q ss_pred CCCCCHHHHHH
Q 007873 534 VDPVDVAAVST 544 (586)
Q Consensus 534 v~~~d~~~la~ 544 (586)
-+..|+.++.+
T Consensus 712 ~~~y~~~~~y~ 722 (824)
T d2gj4a1 712 QRGYNAQEYYD 722 (824)
T ss_dssp HHCCCHHHHHH
T ss_pred hcCCCHHHHHh
Confidence 13345555544
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=8.9e-08 Score=95.63 Aligned_cols=159 Identities=11% Similarity=0.004 Sum_probs=92.1
Q ss_pred cEEEEEec-CccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007873 403 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 481 (586)
Q Consensus 403 ~~i~~iGr-l~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l 481 (586)
..++.+|. .....-.+.+.+.+..+.. ....++++.... ............+.++... .|.. ...++|+.||++|
T Consensus 178 ~~i~~~~gs~g~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~v~-~f~~-~~~~lm~~adl~I 253 (351)
T d1f0ka_ 178 VRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS-QQSVEQAYAEAGQPQHKVT-EFID-DMAAAYAWADVVV 253 (351)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC-HHHHHHHHHHTTCTTSEEE-SCCS-CHHHHHHHCSEEE
T ss_pred cccccccccchhhhhHHHHHHhhhhhcc-cceeeeeccccc-hhhhhhhhcccccccceee-eehh-hHHHHHHhCchhh
Confidence 45555544 4333334555556666533 334444444432 2222222233333344333 3433 3557999999998
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCCc---C----cccccccCcceEEEccccccccCCCC--CCHHHHHHHHHHHHHh
Q 007873 482 IPSRFEPCGLIQLHAMRYGTVPIVASTG---G----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALAT 552 (586)
Q Consensus 482 ~PS~~E~~gl~~lEAma~G~PvI~s~~g---g----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~I~~ll~~ 552 (586)
. -+=+.++.||+++|+|+|+.... + .++.+.+-+.|+.+ +. -+++.+.+.|..+ +
T Consensus 254 t----~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~----------~~~~~~~e~l~~~l~~l--~ 317 (351)
T d1f0ka_ 254 C----RSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKII----------EQPQLSVDAVANTLAGW--S 317 (351)
T ss_dssp E----CCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHTC--C
T ss_pred c----cccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEe----------chhhCCHHHHHHHHHhh--C
Confidence 4 23348899999999999986532 2 24455666678765 33 2467777776665 2
Q ss_pred cCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHh
Q 007873 553 YGTQALAEMMKNGMA--QDLSWKVSIGTVQEED 583 (586)
Q Consensus 553 ~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~~ 583 (586)
++.+.+|++++.+ ..-.++.+++..++-.
T Consensus 318 --~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 318 --RETLLTMAERARAASIPDATERVANEVSRVA 348 (351)
T ss_dssp --HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHccCCccHHHHHHHHHHHHH
Confidence 5677788888764 2335788888777643
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.90 E-value=2.9e-08 Score=100.60 Aligned_cols=80 Identities=23% Similarity=0.179 Sum_probs=60.6
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC--------cccccccCcceEEEccc
Q 007873 456 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSF 527 (586)
Q Consensus 456 ~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~ 527 (586)
+.++....+.+.+ .++..+|++|..+- ..+++|||++|+|+|+....+ ..+.+.+.+.|+.+
T Consensus 269 ~~~v~i~~~~p~~---~ll~~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l--- 338 (391)
T d1pn3a_ 269 GADCFVVGEVNLQ---ELFGRVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV--- 338 (391)
T ss_dssp CTTCCEESSCCHH---HHHTTSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE---
T ss_pred CCCEEEecccCHH---HHHhhccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc---
Confidence 4567666665533 47899999997643 478999999999999987544 35567777789876
Q ss_pred cccccCCCCC--CHHHHHHHHHHHHHh
Q 007873 528 SVDCEAVDPV--DVAAVSTTVRRALAT 552 (586)
Q Consensus 528 ~~~~~~v~~~--d~~~la~~I~~ll~~ 552 (586)
+.. ++++|+++|++++++
T Consensus 339 -------~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 339 -------DGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp -------CCSSCCHHHHHHHHHHHTST
T ss_pred -------CcCCCCHHHHHHHHHHHhCH
Confidence 444 489999999999964
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.89 E-value=3.7e-08 Score=100.14 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=80.1
Q ss_pred cEEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 403 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 403 ~~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
.+++..|........+.+-.++..+...+..+++....... .....+.++....+++.. .++..+|++|.
T Consensus 239 ~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~p~~---~ll~~~~~~I~ 308 (401)
T d1rrva_ 239 PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTEL-------VLPDDRDDCFAIDEVNFQ---ALFRRVAAVIH 308 (401)
T ss_dssp CEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTC-------CCSCCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred eEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEecccccc-------ccccCCCCEEEEeccCcH---HHhhhccEEEe
Confidence 45556666554433333333333333333333333332210 011345677766665543 47889999995
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHh
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 552 (586)
.+-..++.||+++|+|+|+....+ ..+.+++.+.|..+ +.. ++++|+++|++++++
T Consensus 309 ----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l----------~~~~~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 309 ----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH----------DGPTPTFESLSAALTTVLAP 370 (401)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC----------SSSCCCHHHHHHHHHHHTSH
T ss_pred ----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 666789999999999999987665 56666777789876 554 589999999999953
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.56 E-value=1.9e-06 Score=86.62 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=78.0
Q ss_pred cEEEEEecCc-cccCHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007873 403 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 480 (586)
Q Consensus 403 ~~i~~iGrl~-~~KG~d~Ll~A~~~l~~~~v~lvI-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~ 480 (586)
.+++..|... ..+..+.+++++..+ +..+++ .|.... .....+.|+....+.+.. ++|..+|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~--------~~~~~~~nv~~~~~~p~~---~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADL--------VLPDDGADCFAIGEVNHQ---VLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTC--------CCSSCGGGEEECSSCCHH---HHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCcc--------ccccCCCCEEEEeccCHH---HHHhhcCEE
Confidence 3444444433 355566666666665 333333 333221 011234567766655532 578999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccccccCcceEEEccccccccCCCCC--CHHHHHHHHHHHHHh
Q 007873 481 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 552 (586)
Q Consensus 481 l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 552 (586)
|. .+-.+++.||+++|+|+|+....+ ..+.+.+.+.|..+ +.+ ++++|+++|.+++++
T Consensus 306 V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l----------~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 306 IH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHHTSH
T ss_pred Ee----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHhCH
Confidence 94 677899999999999999975544 55566666778875 444 699999999999964
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.40 E-value=3.7e-05 Score=77.82 Aligned_cols=195 Identities=14% Similarity=0.091 Sum_probs=130.5
Q ss_pred hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcCCCCccccccccCccccccccHHHHHHHHHH
Q 007873 315 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 393 (586)
Q Consensus 315 ~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 393 (586)
+-||..++.++..++.+.+ .|.+.. +|.++=+. +|. .....-..+
T Consensus 142 kls~~hf~~t~~~~~~L~~---~Ge~~~------~I~~vG~p~~D~-------------------------i~~~~~~~~ 187 (373)
T d1v4va_ 142 VLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDA-------------------------VLLAAKLGR 187 (373)
T ss_dssp HHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHH-------------------------HHHHHHHCC
T ss_pred cccceeeecchhhhhhhhh---hccccc------ceeecccchhhH-------------------------HHhhhhhcc
Confidence 4699999999999999997 677755 55554332 221 001000001
Q ss_pred hCCCCCCCCcEEEEEecCccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEeccChHHHH
Q 007873 394 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 471 (586)
Q Consensus 394 ~gl~~~~~~~~i~~iGrl~~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 471 (586)
.......+.+.++.+-|-+..+....+.+++..+.+ .++.+++.............+..... .++.....+......
T Consensus 188 ~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~-~n~~~~~~l~~~~~l 266 (373)
T d1v4va_ 188 LPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGV-RNFVLLDPLEYGSMA 266 (373)
T ss_dssp CCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHHH
T ss_pred cccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhccc-ccceeeccchHHHHH
Confidence 111112244677888888777778888888887765 57777766554433444444433333 367777777777777
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CCcCcccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHH
Q 007873 472 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 550 (586)
Q Consensus 472 ~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll 550 (586)
.++..|++++ -..|..+.||..+|+|+|.- +.|.-.+.+..|.+ ++ .+.|++++.+++..++
T Consensus 267 ~ll~~s~~vi-----gnSssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vl-----------v~~d~~~I~~~i~~~l 329 (373)
T d1v4va_ 267 ALMRASLLLV-----TDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KL-----------AGTDPEGVYRVVKGLL 329 (373)
T ss_dssp HHHHTEEEEE-----ESCHHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EE-----------CCSCHHHHHHHHHHHH
T ss_pred HHhhhceeEe-----cccchhhhcchhhcCcEEEeCCCccCHHHHhcCee-EE-----------cCCCHHHHHHHHHHHH
Confidence 8899999998 35678899999999999988 45666676665544 33 4669999999999999
Q ss_pred HhcCHHHHHHHHH
Q 007873 551 ATYGTQALAEMMK 563 (586)
Q Consensus 551 ~~~~~~~~~~~~~ 563 (586)
.+ +..+..+..
T Consensus 330 ~~--~~~~~~~~~ 340 (373)
T d1v4va_ 330 EN--PEELSRMRK 340 (373)
T ss_dssp TC--HHHHHHHHH
T ss_pred cC--HHHHhhccc
Confidence 87 665555533
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=0.00078 Score=67.76 Aligned_cols=250 Identities=16% Similarity=0.069 Sum_probs=145.0
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+||+|++.=|-..++.++..... .++|++. +|.-...+... .+.|+
T Consensus 86 kPD~v~v~GDr~e~la~a~aa~~-------~~ipi~H-iegG~~s~~~~------~~~pd-------------------- 131 (376)
T d1f6da_ 86 KPDVVLVHGDTTTTLATSLAAFY-------QRIPVGH-VEAGLRTGDLY------SPWPE-------------------- 131 (376)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHT-------TTCCEEE-ESCCCCCSCTT------SSTTH--------------------
T ss_pred cCcceeeeccccchhhHHHHHHh-------hCceEEE-Eeccccccccc------ccCch--------------------
Confidence 59966666566666666655543 5888775 45322111000 01122
Q ss_pred hhhhhHHh-hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcC-CCCccccccccCcccccccc
Q 007873 307 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWN-PLTDKYIGVKYDASTVMDAK 383 (586)
Q Consensus 307 ~~~~~~~~-~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~-p~~~~~~~~~~~~~~~~~~~ 383 (586)
...|.++ +-||..+|.++..++.+.+ .|.+.+ +|.++=|. +|.-... +... ..+
T Consensus 132 -e~~R~~iskls~~hf~~~~~~~~~L~~---~G~~~~------~I~~vG~~~~D~l~~~~~~~~-------------~~~ 188 (376)
T d1f6da_ 132 -EANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQVM-------------SSD 188 (376)
T ss_dssp -HHHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHTT-------------TCH
T ss_pred -hhhhhhhccceeEEEeccHHHHhHHHh---cCCCcc------ccceecCchHHHHHHHHhhhh-------------ccc
Confidence 2234444 5799999999999999997 777755 67766542 3321100 0000 000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEecCc-cccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceE
Q 007873 384 PLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 460 (586)
Q Consensus 384 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~KG~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~ 460 (586)
...+..+.....+.. ...++++..-|.+ ..+....++.++..+.+ .++.+++--...........+.... ..++.
T Consensus 189 ~~~~~~~~~~~~~~~-~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~-~~ni~ 266 (376)
T d1f6da_ 189 KLRSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-VKNVI 266 (376)
T ss_dssp HHHHHHHTTCTTCCT-TSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-CTTEE
T ss_pred hhhhhhhccccccCC-CCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcc-cccce
Confidence 111112222222222 2334555555544 34556777777776654 5677766654433333344443333 34677
Q ss_pred EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccCcceEEEccccccccCCCCCCH
Q 007873 461 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 539 (586)
Q Consensus 461 ~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~ 539 (586)
....+.......++..|++++- ..|..+.||-.+|+|+|.-.. ..-.+.+..+ +-++ .+.|.
T Consensus 267 ~~~~l~~~~fl~ll~~a~~vig-----nSssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~-----------v~~~~ 329 (376)
T d1f6da_ 267 LIDPQEYLPFVWLMNHAWLILT-----DSGGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRL-----------VGTDK 329 (376)
T ss_dssp EECCCCHHHHHHHHHHCSEEEE-----SSSGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEE-----------CCSSH
T ss_pred eeccccHHHHHHHHhhceEEEe-----cCcchHhhHHHhCCCEEEcCCCccCccceecC-eeEE-----------CCCCH
Confidence 7777777777789999999994 466778899999999987632 2344555443 4444 34689
Q ss_pred HHHHHHHHHHHHh
Q 007873 540 AAVSTTVRRALAT 552 (586)
Q Consensus 540 ~~la~~I~~ll~~ 552 (586)
+++.+++.+++.+
T Consensus 330 ~~I~~ai~~~l~~ 342 (376)
T d1f6da_ 330 QRIVEEVTRLLKD 342 (376)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999987
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.62 E-value=0.0048 Score=62.14 Aligned_cols=138 Identities=9% Similarity=-0.005 Sum_probs=76.1
Q ss_pred EEEEEecCccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007873 404 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 482 (586)
Q Consensus 404 ~i~~iGrl~~~KG~d~Ll~A~~~l~~~~v~lvIvG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~ 482 (586)
+++..+........+.+...+..+......+++.-.+. ......+.+... .+.++........+.. ..+..||++|.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~v~~~~pq~~~-l~~p~~~~fIt 354 (461)
T d2acva1 277 VFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWME-LEGKGMICGWAPQVEV-LAHKAIGGFVS 354 (461)
T ss_dssp EEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHH-HHCSEEEESSCCHHHH-HHSTTEEEEEE
T ss_pred eeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhc-cCCCeEEEecCCHHHH-HhcccCCEEEe
Confidence 33344444444555555444444433355555443332 111111112111 2234544444444433 36789999994
Q ss_pred cCCCCCCcHHHHHHHHcCCcEEEcCCcC----cccc-cccCcceEEEccccccccCCC---CCCHHHHHHHHHHHHHh
Q 007873 483 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMGSFSVDCEAVD---PVDVAAVSTTVRRALAT 552 (586)
Q Consensus 483 PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~~~~~~~~~~~~v~---~~d~~~la~~I~~ll~~ 552 (586)
-+=..++.||+.+|+|+|+....+ ...- ++..+.|+.+ +.+... .-++++++++|.++|++
T Consensus 355 ----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l-----~~~~~~~~~~~t~~~l~~a~~~vl~~ 423 (461)
T d2acva1 355 ----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGL-----RVDYRKGSDVVAAEEIEKGLKDLMDK 423 (461)
T ss_dssp ----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEES-----CSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred ----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEe-----eccccccCCccCHHHHHHHHHHHhhC
Confidence 445578999999999999976433 4444 3555678764 100000 14789999999999965
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.59 E-value=0.0018 Score=65.55 Aligned_cols=116 Identities=13% Similarity=-0.049 Sum_probs=70.9
Q ss_pred HHHHHHHHhhcccCCeEEEEEeCCChhhHHHH-HHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHH
Q 007873 417 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 495 (586)
Q Consensus 417 ~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lE 495 (586)
...+++++..+ +.++++...+... ..+ +......+.++....+.+..++. ....++++|. =+=..++.|
T Consensus 283 ~~~~~~~~~~~---~~~vl~~~~~~~~--~~l~~~~~~~~~~nv~~~~~~pq~~lL-~hp~~~~fIt----HGG~~s~~e 352 (450)
T d2c1xa1 283 VVALSEALEAS---RVPFIWSLRDKAR--VHLPEGFLEKTRGYGMVVPWAPQAEVL-AHEAVGAFVT----HCGWNSLWE 352 (450)
T ss_dssp HHHHHHHHHHH---TCCEEEECCGGGG--GGSCTTHHHHHTTTEEEESCCCHHHHH-TSTTEEEEEE----CCCHHHHHH
T ss_pred HHHHHHHHHhc---CCeEEEEECCCcc--ccCChhhhhhccccccccccCChHhhh-ccCceeEEEc----cCCccHHHH
Confidence 44455555554 5566655443311 111 11122234457666555554321 2367788884 345578999
Q ss_pred HHHcCCcEEEcCCcC----ccccccc-CcceEEEccccccccCCCC--CCHHHHHHHHHHHHHh
Q 007873 496 AMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALAT 552 (586)
Q Consensus 496 Ama~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~--~d~~~la~~I~~ll~~ 552 (586)
|+.+|+|+|+....+ ...-+.+ .+.|... +. -+++++.++|.++|++
T Consensus 353 al~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l----------~~~~~t~~~l~~ai~~vL~d 406 (450)
T d2c1xa1 353 SVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI----------EGGVFTKSGLMSCFDQILSQ 406 (450)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC----------GGGSCCHHHHHHHHHHHHHS
T ss_pred HHHcCCCEEecccccchHHHHHHHHHHcCcEEEe----------cCCCcCHHHHHHHHHHHhcC
Confidence 999999999987654 3334544 4788865 33 3789999999999997
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.53 E-value=0.0086 Score=59.81 Aligned_cols=249 Identities=15% Similarity=0.104 Sum_probs=132.6
Q ss_pred CCCEEEEecCCccchHHHHHHhhccCCCCCCCceEEEEEcCCccccccCcccccccCCChhhccccccccCCCCCcCCcc
Q 007873 227 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 306 (586)
Q Consensus 227 ~pDvii~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (586)
+||+|++.=|-..++.++..... .++|++. +|.-...+.. ..+.|+
T Consensus 88 kpD~v~v~GDr~e~la~a~aa~~-------~~Ipi~H-iegG~~s~~~------~~~~~d-------------------- 133 (377)
T d1o6ca_ 88 KPDIVLVHGDTTTTFAGSLAAFY-------HQIAVGH-VEAGLRTGNK------YSPFPE-------------------- 133 (377)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHH-------TTCEEEE-ESCCCCCSCT------TTTTTH--------------------
T ss_pred ccceeEeeecccccchhhhhhhh-------ccceEEE-Eecccccccc------cccCch--------------------
Confidence 59966665566666666555554 4889854 4432211100 011222
Q ss_pred hhhhhHHh-hcCCEEEEeCHHHHHHHhcCccCCCcchhhhhccCeeEecCC-cccCCcCCCCccccccccCccccccccH
Q 007873 307 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 384 (586)
Q Consensus 307 ~~~~~~~~-~~ad~vitvS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 384 (586)
...|.++ +-||..++.++..++.+.+ .|.+.+ +|.++=|. +|.-........ .
T Consensus 134 -e~~R~~iskls~~hf~~t~~~~~~L~~---~G~~~~------~I~~vG~~~~D~i~~~~~~~~-~-------------- 188 (377)
T d1o6ca_ 134 -ELNRQMTGAIADLHFAPTGQAKDNLLK---ENKKAD------SIFVTGNTAIDALNTTVRDGY-S-------------- 188 (377)
T ss_dssp -HHHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC-C--------------
T ss_pred -hhhccccccceeEEeecchhhhhhhhh---hccccc------eEeeccchhHHHHHHHHHHHH-h--------------
Confidence 2334344 5699999999999999997 677755 66666553 332111000000 0
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEecCcccc-CHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHHCCCceEE
Q 007873 385 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQK-GSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 461 (586)
Q Consensus 385 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~K-G~d~Ll~A~~~l~~--~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~ 461 (586)
...... ...+.++++.+-|.+..+ .....+.++..+.. .++.+++-..........+.+.. ....++..
T Consensus 189 ------~~~~~~-~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~ni~~ 260 (377)
T d1o6ca_ 189 ------HPVLDQ-VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHF-GDSDRVHL 260 (377)
T ss_dssp ------CSTTTT-TTTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC---CCSSEEE
T ss_pred ------hhhhhh-ccCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhcc-ccccceEe
Confidence 000001 112345666666655432 22333333333322 56666655443322222322222 23346877
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCC-cCcccccccCcceEEEccccccccCCCCCCHH
Q 007873 462 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 540 (586)
Q Consensus 462 ~~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 540 (586)
...+.......++..|++++ -..|-.+.||-.+|+|+|.-.. +.-.+.+..|. -+++ +.|.+
T Consensus 261 ~~~l~~~~fl~llk~s~~vI-----gnSss~i~Ea~~lg~P~Inir~~tERqe~~~~g~-nilv-----------~~~~~ 323 (377)
T d1o6ca_ 261 IEPLEVIDFHNFAAKSHFIL-----TDSGGVQEEAPSLGKPVLVLRDTTERPEGVEAGT-LKLA-----------GTDEE 323 (377)
T ss_dssp CCCCCHHHHHHHHHHCSEEE-----EC--CHHHHGGGGTCCEEEECSCCC---CTTTTS-SEEE-----------CSCHH
T ss_pred ccccchHHHHHHHhhhheee-----cccchhHHhhhhhhceEEEeCCCCcCcchhhcCe-eEEC-----------CCCHH
Confidence 77777778888999999998 3456668899999999998754 33556655553 3443 45899
Q ss_pred HHHHHHHHHHHhcCHHHHHHH
Q 007873 541 AVSTTVRRALATYGTQALAEM 561 (586)
Q Consensus 541 ~la~~I~~ll~~~~~~~~~~~ 561 (586)
++.+++..++.+ ...++.+
T Consensus 324 ~I~~~i~~~l~~--~~~~~~~ 342 (377)
T d1o6ca_ 324 NIYQLAKQLLTD--PDEYKKM 342 (377)
T ss_dssp HHHHHHHHHHHC--HHHHHHH
T ss_pred HHHHHHHHHHhC--hHHHhhh
Confidence 999999999987 5544443
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.47 E-value=0.0041 Score=62.82 Aligned_cols=82 Identities=9% Similarity=-0.027 Sum_probs=58.7
Q ss_pred HCCCceEEEeccChHHHHHHH--HhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----ccccc-ccCcceEEEcc
Q 007873 454 LYPEKARGVAKFNIPLAHMII--AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGS 526 (586)
Q Consensus 454 ~~~~~v~~~~~~~~~~~~~~l--~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~ 526 (586)
..+.|+....+++.+. +| ..++++|. =+=.+++.||+.+|+|+|+....+ ...-+ +..+.|...
T Consensus 343 ~~~~Nv~~~~~~Pq~~---lL~hp~~~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l-- 413 (473)
T d2pq6a1 343 EIADRGLIASWCPQDK---VLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI-- 413 (473)
T ss_dssp HHTTTEEEESCCCHHH---HHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC--
T ss_pred hccCceEEeeeCCHHH---HhcCCcCcEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee--
Confidence 3455777665555543 55 57888884 345578999999999999987543 44444 444678875
Q ss_pred ccccccCCC-CCCHHHHHHHHHHHHHh
Q 007873 527 FSVDCEAVD-PVDVAAVSTTVRRALAT 552 (586)
Q Consensus 527 ~~~~~~~v~-~~d~~~la~~I~~ll~~ 552 (586)
+ .-+.++|+++|.+++++
T Consensus 414 --------~~~~t~~~l~~ai~~vl~d 432 (473)
T d2pq6a1 414 --------DTNVKREELAKLINEVIAG 432 (473)
T ss_dssp --------CSSCCHHHHHHHHHHHHTS
T ss_pred --------CCCcCHHHHHHHHHHHHcC
Confidence 3 34799999999999987
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=93.31 E-value=0.64 Score=44.22 Aligned_cols=157 Identities=15% Similarity=0.147 Sum_probs=89.0
Q ss_pred HHHHHHHHhCCCCCCCCcEEEE-Ee-cCccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCC----C
Q 007873 386 LKEALQAEVGLPVDRNIPVIGF-IG-RLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----E 457 (586)
Q Consensus 386 ~~~~l~~~~gl~~~~~~~~i~~-iG-rl~~~KG--~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~----~ 457 (586)
.+....+.+++..+ .+.|++ .| +..+.|. .+..++.+..+.+.+.+++++|...+ .+..+++..... .
T Consensus 166 ~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e--~~~~~~~~~~~~~~~~~ 241 (348)
T d1pswa_ 166 EKSYTCNQFSLSSE--RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD--HEAGNEILAALNTEQQA 241 (348)
T ss_dssp HHHHHHHHTTCCSS--SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG--HHHHHHHHTTSCHHHHT
T ss_pred HHHHHHHHhccccC--CCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccch--HHHHHHHHHhhhccccc
Confidence 35556667777643 355444 43 3344565 55677888888777888999986552 333333332221 1
Q ss_pred ceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcCccccccc-CcceEEEcccccccc---
Q 007873 458 KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCE--- 532 (586)
Q Consensus 458 ~v~~~-~~~~~~~~~~~l~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~~~~~~~~~~~--- 532 (586)
.+... +..+-.++..+++.||++|-+.. ..+--|.++|+|+|+--.+..++.... +.+..++ .-..+|.
T Consensus 242 ~~~~l~g~~sl~el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lfg~~~~~~~~P~~~~~~~l-~~~~~c~~c~ 315 (348)
T d1pswa_ 242 WCRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVI-RLITGYHKVR 315 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEESSSCTTSSCCCCTTEEEE-ESSCC-----
T ss_pred ccccccCCccHHHHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEECCCCHhhhCCCCCCeEEE-ecCCCCCccc
Confidence 23332 34466777789999999997643 334559999999998754333333222 1111111 1111111
Q ss_pred -----C-----CCCCCHHHHHHHHHHHHHh
Q 007873 533 -----A-----VDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 533 -----~-----v~~~d~~~la~~I~~ll~~ 552 (586)
. +..=+++++.++++++|.+
T Consensus 316 ~~~~~~~~~~c~~~I~~~~V~~~~~~lL~~ 345 (348)
T d1pswa_ 316 KGDAAEGYHQSLIDITPQRVLEELNALLLQ 345 (348)
T ss_dssp -----CCCCHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCchhhHhCCCHHHHHHHHHHHhcc
Confidence 1 2334677778888877765
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.55 E-value=0.57 Score=46.09 Aligned_cols=85 Identities=9% Similarity=-0.125 Sum_probs=54.0
Q ss_pred CCceEEEeccChHHHHHHH--HhccEEEEcCCCCCCcHHHHHHHHcCCcEEEcCCcC----ccccccc-CcceEEEcccc
Q 007873 456 PEKARGVAKFNIPLAHMII--AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFS 528 (586)
Q Consensus 456 ~~~v~~~~~~~~~~~~~~l--~~aDi~l~PS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~ 528 (586)
++|+....+.+... +| ..++++|. =+=.+++.||+.+|+|+|+....+ ....+.+ -+.|+...
T Consensus 333 ~~nv~~~~w~Pq~~---lL~hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~--- 402 (471)
T d2vcha1 333 KRGFVIPFWAPQAQ---VLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPR--- 402 (471)
T ss_dssp TTEEEEESCCCHHH---HHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCC---
T ss_pred CCCeeecccCCHHH---HhcCccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEe---
Confidence 34566555555543 66 46788883 344578999999999999986432 3333433 35666430
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHh
Q 007873 529 VDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 529 ~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
-+....-+.++|+++|.+++++
T Consensus 403 --~~~~~~~t~~~l~~ai~~vl~~ 424 (471)
T d2vcha1 403 --AGDDGLVRREEVARVVKGLMEG 424 (471)
T ss_dssp --CCTTSCCCHHHHHHHHHHHHTS
T ss_pred --cCCCCcCCHHHHHHHHHHHhCC
Confidence 0000113789999999999987
|
| >d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: tRNA 2-thiouridine synthesizing protein D, TusD species: Escherichia coli [TaxId: 562]
Probab=83.05 E-value=0.74 Score=37.65 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeEE-EEEe
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVM-TIAP 126 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~-vvt~ 126 (586)
||++++-.. +|+ .+........+++++.++||+|. |+..
T Consensus 1 Mk~~i~v~~-~P~--~~~~a~~A~~fA~aal~~Gh~V~~vF~~ 40 (128)
T d2d1pa1 1 MRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFFY 40 (128)
T ss_dssp CEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEEec-CCC--CcHHHHHHHHHHHHHHhCCCceeEEEEe
Confidence 888888775 676 45566678899999999999994 6654
|
| >d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Nitrate/nitrite response regulator (NarL), receiver domain species: Escherichia coli [TaxId: 562]
Probab=82.78 E-value=9.7 Score=30.57 Aligned_cols=111 Identities=19% Similarity=0.265 Sum_probs=71.7
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEecc-ChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc---CCc
Q 007873 430 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTV 502 (586)
Q Consensus 430 ~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~~l~--~aDi~l~PS~~-E~~gl~~lEAma~---G~P 502 (586)
++++++|+-+.+ ...+.++++....++ ....... ++.++.+.+. ..|++++=-.. +.-|+-+++.+.. .+|
T Consensus 1 ePi~VLiVDD~~-~~r~~l~~~L~~~~~-~~~v~~a~~~~~al~~~~~~~~DlvllD~~mP~~~G~el~~~ir~~~~~~~ 78 (138)
T d1a04a2 1 EPATILLIDDHP-MLRTGVKQLISMAPD-ITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGR 78 (138)
T ss_dssp CCEEEEEECSCH-HHHHHHHHHHTTCTT-EEEEEEESSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSE
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhhCCCCC
Confidence 367788887754 355566665544442 3333333 5666555554 46888876554 5578888887754 556
Q ss_pred EEEcC-CcC---cccccccCcceEEEccccccccCCCCCCHHHHHHHHHHHHHh
Q 007873 503 PIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 552 (586)
Q Consensus 503 vI~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 552 (586)
+|.-. .+. ..+.++.|..||+. .|.++++|.++|.+++..
T Consensus 79 vivlt~~~~~~~~~~a~~~Ga~~yl~----------Kp~~~~~L~~~i~~v~~g 122 (138)
T d1a04a2 79 IVVFSVSNHEEDVVTALKRGADGYLL----------KDMEPEDLLKALHQAAAG 122 (138)
T ss_dssp EEEEECCCCHHHHHHHHHTTCSEEEE----------TTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEECCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHCC
Confidence 55433 332 22344569999998 999999999999999874
|
| >d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DsrEFH-like superfamily: DsrEFH-like family: DsrEF-like domain: Sulfurtransferase DsrE species: Chromatium vinosum [TaxId: 1049]
Probab=82.16 E-value=0.84 Score=37.35 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=30.2
Q ss_pred ceEEEEeccccCccccchHHHHhhhhHHHHHhCCCeE-EEEE
Q 007873 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIA 125 (586)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V-~vvt 125 (586)
||++++-.. .|+ ..-......++++++.++||+| .|+.
T Consensus 1 Mk~~i~v~~-~P~--~~~~a~~al~fA~aal~~gh~V~~vFf 39 (130)
T d2hy5a1 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFF 39 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 898888875 676 4456667888999999999999 4664
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=81.43 E-value=6.9 Score=33.09 Aligned_cols=127 Identities=15% Similarity=0.114 Sum_probs=69.6
Q ss_pred CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHHCCCceEEEecc----------------C-hHHHHHHHHhcc
Q 007873 416 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF----------------N-IPLAHMIIAGAD 478 (586)
Q Consensus 416 G~d~Ll~A~~~l~~~~v~lvIvG~g~~~~~~~l~~l~~~~~~~v~~~~~~----------------~-~~~~~~~l~~aD 478 (586)
-.+...+.-+.|.+.+. .|+.| |.......+.+-+.+.++.+.+.... + .+....++..||
T Consensus 21 ~~~~a~~lG~~la~~g~-~V~~G-G~~GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~~~~~~Rk~~m~~~sd 98 (170)
T d1rcua_ 21 LRDICLELGRTLAKKGY-LVFNG-GRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRNAD 98 (170)
T ss_dssp GHHHHHHHHHHHHHTTC-EEEEC-CSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHCCC-EEECC-CccCHHHHHHHHHHhcCCccccccchhhccCcccceeEEeccchhhhHHHHhhccc
Confidence 34444455555555665 55444 54445556666565555555444321 1 123445789999
Q ss_pred EEEEcCCCCCCcHH--HHHHHHcCCcEEEcC-CcCcccccccC--cceEEEccccccccCCCCCCHHHHHHHHHH
Q 007873 479 FILIPSRFEPCGLI--QLHAMRYGTVPIVAS-TGGLVDTVEEG--FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 548 (586)
Q Consensus 479 i~l~PS~~E~~gl~--~lEAma~G~PvI~s~-~gg~~e~v~~g--~~G~~~~~~~~~~~~v~~~d~~~la~~I~~ 548 (586)
++|... -++|.. ++|++..++|+|.-+ .|++.+.+.+. ..|++- ....+. ..-.+|++++.+.|++
T Consensus 99 a~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~-~~~~~~-i~~~~~~ee~~~~l~~ 169 (170)
T d1rcua_ 99 VVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLD-NRRIVE-IHQAWTVEEAVQIIEQ 169 (170)
T ss_dssp EEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSS-TTCCSC-EEEESSHHHHHHHHHT
T ss_pred ceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCC-HHHcCe-EEEeCCHHHHHHHHHc
Confidence 998643 345654 789999999999876 45555555421 123321 000011 1124588888877764
|