Citrus Sinensis ID: 007906


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MTGESPSMGLIADPMEKASRYDGSSSKVRLLWKKLARKASKPCIESKALSSYSGREERKVYEKFRPFQDSVLGATSVKSRTSKVPNCSGEENAEPLSSTFPRSKSQSQLSVVSDADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVSTSGSRWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQNSKNLDCYERPDTVSKVTSIPSTSSSTPAIQNSKFLRELRTPLLEIDNSQEACQQNKEELSECQSPSATSSTQSEKQMIGIEEDDSRLKKPGRRARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP
ccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccEEEEEEEccccccEEEccccccccccccEEEEEEEEEcccEEEEEEccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEEEEEEEEEEEEEEEEcccccccEEEEccccccEEEEEEEcccccEEEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccc
ccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHcccHHHHcHcccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHcccEEEEEEccccccccEccccccccccccEEEEEEEEEEEcEEEEEEEEEEEEEEccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEcccccccEEEEEEccccEEEEEEEEcccccEEcHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccEEccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccc
mtgespsmgliadpmekasrydgsssKVRLLWKKLARKAskpcieskalssysgreerkvyekfrpfqdsvlgatsvksrtskvpncsgeenaeplsstfprsksqsqlsvvsdadsddkfIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSnmrtpsyigeiictdidtgnlppyvhgmrvlptdmnevwAFEVDIEYAGGVVLDVETRLEVRELDLHkgivdanseeagavgdvssDLLEGFEYFGKqlnisegtfdgqdhkdqgdpkpdglknnrstmpvstsgSRWKSILNSIAKQVSQVPISLSIRVAALRGTlrlhikpppsdqlwfgftsmpdiefamessvgdhkitsGQVALFLINRFKASIretmvlpncesvsvpwmsaekddwvprnvapfiwlnheansdqvpaceafssqtTEVKTTMeatsvtsidqpeqknqnsknldcyerpdtvskvtsipstssstpaiqnsKFLRELRTplleidnsQEACQQNKEelsecqspsatsstqsekqmigieeddsrlkkpgrrARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP
mtgespsmgliadpmekasrydgssSKVRLLWKKLarkaskpcieskalssysgreerkvyekfrpfqdsvlgatsvksrtskvpncsgeenaeplsstfprsksqsqlSVVSDADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRAlsnmrtpsyIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHkgivdanseeagaVGDVSSDLLEGFEYFGKQLNISegtfdgqdhkdqgdpkpdglknnrstmpvstsgsRWKSILNSIAKQVSQVPISLSIRVAALRGTLrlhikpppsdqLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEAtsvtsidqpeqknqnsknldcyerPDTVSkvtsipstssstpaiqnskFLRELRTPLLEIDNSQEACQQNKEElsecqspsatsstqsekqmigieeddsrlkkpgrrarmldlgknmkekleekrrhieekgrhivekmrgp
MTGESPSMGLIADPMEKASRYDGSSSKVRLLWKKLARKASKPCIESKALSSYSGREERKVYEKFRPFQDSVLGATSVKSRTSKVPNCSGEENAEPLSSTFPRSKSQSQLSVVSDADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVSTSGSRWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQNSKNLDCYERPDtvskvtsipstssstpAIQNSKFLRELRTPLLEIDNSQEACQQNKEELSECQSPSATSSTQSEKQMIGIEEDDSRLKKPGRRARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP
*****************************LLWKKL************************************************************************************KFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLEGFEYFGKQLNI************************************WKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEA***********************************************************************************************************************************************************************
****************************************************************************************************************************EATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELD**************************************************************************SILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNV******************************************************************************************************************************************************NM************EK**HIVEKM***
********GLIADPMEK*********KVRLLWKKLARKASKPCIESKALSSYSGREERKVYEKFRPFQDSVLGATS***************************************DSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRS*********RWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTE**********************SKNLDCYERPDTV***************IQNSKFLRELRTPLLEIDNSQE******************************EEDDSRLKKPGRRARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP
**************************KVRLL**KLARKA********************************************************************************KFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDL********************************************************************GSRWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNV****************************************************************************************************************************************************GKNMKEKLEEKRRHIEEKGRHIVEK*R**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTGESPSMGLIADPMEKASRYDGSSSKVRLLWKKLARKASKPCIESKALSSYSGREERKVYEKFRPFQDSVLGATSVKSRTSKVPNCSGEENAEPLSSTFPRSKSQSQLSVVSDADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVSTSGSRWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQNSKNLDCYERPDTVSKVTSIPSTSSSTPAIQNSKFLRELRTPLLEIDNSQEACQQNKEELSECQSPSATSSTQSEKQMIGIEEDDSRLKKPGRRARMxxxxxxxxxxxxxxxxxxxxxGRHIVEKMRGP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query585 2.2.26 [Sep-21-2011]
Q6ZPJ01128 Testis-expressed sequence yes no 0.476 0.247 0.227 4e-17
Q8IWB91127 Testis-expressed sequence yes no 0.456 0.236 0.215 4e-15
O94464 779 Uncharacterized protein C yes no 0.117 0.088 0.320 2e-09
Q06833770 Uncharacterized PH domain yes no 0.150 0.114 0.288 9e-08
>sp|Q6ZPJ0|TEX2_MOUSE Testis-expressed sequence 2 protein OS=Mus musculus GN=Tex2 PE=1 SV=2 Back     alignment and function desciption
 Score = 90.5 bits (223), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 38/317 (11%)

Query: 131  NLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRV 190
            N L+ R+F+D          +  +IQ  LS ++ P ++ E+  T++D G   P +     
Sbjct: 826  NALLGRIFWDFLGEKYWSDVVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFK 885

Query: 191  LPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGDVSSDLLE 250
               D   +W  ++++ Y G  ++ +ET++ + +L     +      EA  VG++     E
Sbjct: 886  PYVDHQGLW-IDLEMSYNGSFLMTLETKMNLTKLGKEPLV------EALKVGEIGK---E 935

Query: 251  GFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVS---TSGSRWKSILNSIAK 307
            G       L  S+         ++ DP P+    ++  +P +     G R   I+  + K
Sbjct: 936  GCRPRAYCLADSDEESSSAGSSEEDDP-PEPTAGDKQPLPGAEGYVGGHRTSKIMRFVDK 994

Query: 308  ---------------------QVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSM 346
                                 +VS  P+ L++ V   RGTL ++I PPP+D++W+GF   
Sbjct: 995  ITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRIWYGFRKP 1054

Query: 347  PDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPR 406
            P +E      +G+ ++T   V  ++  + +  +++  V+PN + V +P M +  D   PR
Sbjct: 1055 PYVELKARPKLGEREVTLVHVTEWIEKKLEQELQKVFVMPNMDDVYIPIMHSAMD---PR 1111

Query: 407  NVAPFIWLNHEANSDQV 423
            + +  +       SDQ+
Sbjct: 1112 STSCLLKEPPVETSDQL 1128





Mus musculus (taxid: 10090)
>sp|Q8IWB9|TEX2_HUMAN Testis-expressed sequence 2 protein OS=Homo sapiens GN=TEX2 PE=1 SV=2 Back     alignment and function description
>sp|O94464|YBR6_SCHPO Uncharacterized protein C23G7.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23G7.06c PE=1 SV=3 Back     alignment and function description
>sp|Q06833|YP091_YEAST Uncharacterized PH domain-containing protein YPR091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR091C PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
255569399 792 conserved hypothetical protein [Ricinus 0.976 0.720 0.625 0.0
224116568 802 predicted protein [Populus trichocarpa] 0.984 0.718 0.615 0.0
359489932 1249 PREDICTED: uncharacterized protein LOC10 0.982 0.460 0.576 0.0
224118514 776 predicted protein [Populus trichocarpa] 0.938 0.707 0.583 1e-175
297737191 751 unnamed protein product [Vitis vinifera] 0.907 0.707 0.551 1e-169
356533705 789 PREDICTED: uncharacterized protein LOC10 0.941 0.698 0.520 1e-163
356561792 801 PREDICTED: uncharacterized protein LOC10 0.979 0.715 0.534 1e-158
30685543 803 Putative integral membrane protein conse 0.931 0.678 0.505 1e-149
297850174 797 hypothetical protein ARALYDRAFT_889192 [ 0.929 0.682 0.501 1e-149
9665060 797 Strong similarity to a hypothetical prot 0.921 0.676 0.504 1e-148
>gi|255569399|ref|XP_002525667.1| conserved hypothetical protein [Ricinus communis] gi|223535103|gb|EEF36785.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/582 (62%), Positives = 441/582 (75%), Gaps = 11/582 (1%)

Query: 6   PSMGLIADPMEKASRYDGSSSKVRLLWKKLARKASKPCIESKALSSYSGREERKVYEKFR 65
           PS G+ A+P ++ ++ DGS+SKVRL  KKLARKASK  IE++   S S R+ERK+ +K R
Sbjct: 220 PSAGVNAEPTDRVTKLDGSASKVRLFLKKLARKASKASIENRGTFSLS-RDERKINDKTR 278

Query: 66  PFQDSVLGATSVKSR-TSKVPNCSGEENAEPL-SSTFPRSKSQSQLSVVSDADSDDKFIV 123
            FQD  L  + +K+  T+K   CS EE+   L SST  RS SQS     SD DSD+KF +
Sbjct: 279 SFQDPNLSTSLIKTAPTAKSYLCSEEESISALASSTISRSASQSP---TSDVDSDEKFSI 335

Query: 124 DEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPP 183
           DE TLCWNLLI R FFDAK NV +KS +Q+RIQR LSNMRTP+YIGEI+CTD+  G+LPP
Sbjct: 336 DEGTLCWNLLISRFFFDAKSNVSIKSLVQSRIQRTLSNMRTPNYIGEIVCTDLALGSLPP 395

Query: 184 YVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANSEEAGAVGD 243
           Y+HG+RVLPTDMNEVWA+EVD+EY+GG+VLD+ETRLEV+  +L + +VD NSE +     
Sbjct: 396 YIHGIRVLPTDMNEVWAWEVDVEYSGGLVLDIETRLEVQ--NLEQDMVDTNSESSSGD-- 451

Query: 244 VSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVSTSGSRWKSILN 303
           VSSDLLEGFEYFGKQLN+SEG  D  + K++G+ K DGLKN  S +P ST+ S+WKSILN
Sbjct: 452 VSSDLLEGFEYFGKQLNLSEGAADVPERKNEGNLKLDGLKNPTSYLPTSTNVSKWKSILN 511

Query: 304 SIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKIT 363
           S+AKQVSQVP+SLSIRVA+LRGTLRLHIKPPPSDQLW+GFTSMPDIEF +ESSVGDHKI+
Sbjct: 512 SVAKQVSQVPLSLSIRVASLRGTLRLHIKPPPSDQLWYGFTSMPDIEFDLESSVGDHKIS 571

Query: 364 SGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQV 423
           S  +ALFLINRFKA+IRETMVLPNCES+ +PWM AEK+DW PR VAPF+WLN EA+ DQ 
Sbjct: 572 SAHIALFLINRFKAAIRETMVLPNCESLCIPWMLAEKNDWAPRTVAPFMWLNREASCDQA 631

Query: 424 PACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQNSKNLDCYERPDTVSKVTSIPSTSSST 483
            + E   SQ  E KT  EA    S +  E KN   +N++C ++  + S  T   S SS+ 
Sbjct: 632 TSNETLGSQLDEAKTKEEAYRRASSNDSESKNLKVQNIECTQQSISDSSDTLESSLSSTK 691

Query: 484 PAIQNSKFLRELRTPLLEIDNSQEACQQNKEELSECQSPSATSSTQSEKQMIGIEEDDSR 543
           P+IQNSK L+EL +PLL     QE C+Q++   SECQSPS  S   +EK     EEDDSR
Sbjct: 692 PSIQNSKSLQELTSPLLTSYEPQETCEQSRGCTSECQSPS-RSLIHAEKHNHAAEEDDSR 750

Query: 544 LKKPGRRARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP 585
            K+ GRRARMLDLGK M EKLEEKRRHIEEKGR+IVEKMRGP
Sbjct: 751 PKRMGRRARMLDLGKKMGEKLEEKRRHIEEKGRNIVEKMRGP 792




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116568|ref|XP_002331929.1| predicted protein [Populus trichocarpa] gi|222874601|gb|EEF11732.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359489932|ref|XP_002266946.2| PREDICTED: uncharacterized protein LOC100244234 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224118514|ref|XP_002331381.1| predicted protein [Populus trichocarpa] gi|222873595|gb|EEF10726.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297737191|emb|CBI26392.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533705|ref|XP_003535400.1| PREDICTED: uncharacterized protein LOC100816218 [Glycine max] Back     alignment and taxonomy information
>gi|356561792|ref|XP_003549162.1| PREDICTED: uncharacterized protein LOC100812281 [Glycine max] Back     alignment and taxonomy information
>gi|30685543|ref|NP_173224.2| Putative integral membrane protein conserved region (DUF2404) [Arabidopsis thaliana] gi|22135976|gb|AAM91570.1| unknown protein [Arabidopsis thaliana] gi|34098829|gb|AAQ56797.1| At1g17820 [Arabidopsis thaliana] gi|332191519|gb|AEE29640.1| Putative integral membrane protein conserved region (DUF2404) [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297850174|ref|XP_002892968.1| hypothetical protein ARALYDRAFT_889192 [Arabidopsis lyrata subsp. lyrata] gi|297338810|gb|EFH69227.1| hypothetical protein ARALYDRAFT_889192 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|9665060|gb|AAF97262.1|AC034106_5 Strong similarity to a hypothetical protein T18K17.13 gi|6598861 from Arabidopsis thaliana BAC T18K17 gb|AC010556 and contains a PH PF|00169 domain [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
TAIR|locus:2030983803 AT1G17820 [Arabidopsis thalian 0.890 0.648 0.496 1.2e-132
TAIR|locus:2197269779 AT1G73200 [Arabidopsis thalian 0.940 0.706 0.470 5.9e-128
UNIPROTKB|J9P4621039 TEX2 "Uncharacterized protein" 0.627 0.353 0.222 1.8e-16
RGD|1305112634 Tex2 "testis expressed 2" [Rat 0.644 0.594 0.227 5.3e-16
ZFIN|ZDB-GENE-070615-71070 tex2 "testis expressed 2" [Dan 0.617 0.337 0.237 1.6e-15
UNIPROTKB|J3KRZ8626 TEX2 "Testis-expressed sequenc 0.529 0.495 0.232 1.8e-15
MGI|MGI:1024651128 Tex2 "testis expressed gene 2" 0.656 0.340 0.231 1.8e-15
UNIPROTKB|G3V9L11122 Tex2 "Protein Tex2" [Rattus no 0.644 0.336 0.227 3.2e-15
UNIPROTKB|F1NX58587 LOC416541 "Uncharacterized pro 0.153 0.153 0.277 1.2e-14
UNIPROTKB|F6XFT81128 TEX2 "Uncharacterized protein" 0.567 0.294 0.222 2.5e-14
TAIR|locus:2030983 AT1G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1223 (435.6 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
 Identities = 274/552 (49%), Positives = 346/552 (62%)

Query:    53 SGREERKVYEKFRPFQDSVLGATSVKSRTSKVPNCSGEENAEPLSSTFPRSK---SQSQL 109
             S RE+RK Y           G++S K    K  N + + +    S +   S      S L
Sbjct:   263 SNREDRKTYSHH--------GSSSGKCFPGK-NNMTDDTDVPIFSRSVSHSSHISGVSHL 313

Query:   110 SVVSDADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIG 169
             S VSD DS++K  +DE TL  NLLI RLFFD K   GVK+S+QARIQR LSNMRTPSYIG
Sbjct:   314 SGVSDGDSEEKVDMDEGTLALNLLISRLFFDLKRKTGVKNSVQARIQRLLSNMRTPSYIG 373

Query:   170 EIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKG 229
             E+IC+D+DTGNLPP++H  RVLP +M+ VWAFE+DIEY+G VV+DVETR+++RE+DL +G
Sbjct:   374 ELICSDVDTGNLPPHIHATRVLPMEMSGVWAFELDIEYSGDVVIDVETRVDIREVDLQQG 433

Query:   230 IVDANSEEAGAVGDVSSDLLEGFEYFGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTM 289
             I D   +   + G V S+  EG E F KQL     T +  + K+ G  K D  K++R T 
Sbjct:   434 ITDTRLQPRSS-GVVPSNFAEGVEDFEKQLVFPVETVNAGEVKNGGANKADESKSSRGTK 492

Query:   290 PVSTSGSRWKSILNSIAKQVSQVPISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDI 349
                   SRWKSIL +IA+QVSQVPISLSIRV++LRGTLR+H+KPPPSDQLWFGFTSMPDI
Sbjct:   493 AAPNGVSRWKSILKTIAEQVSQVPISLSIRVSSLRGTLRVHMKPPPSDQLWFGFTSMPDI 552

Query:   350 EFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSVPWMSAEKDDWVPRNVA 409
             EF + SSVG+HKIT+  VA+FLINRFK +IRE +VLPNCES+++PWM AEKDDWV R  A
Sbjct:   553 EFDLASSVGEHKITNSHVAMFLINRFKTAIREAVVLPNCESLTIPWMIAEKDDWVQRKAA 612

Query:   410 PFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQN--SK-----NLD 462
             PF+WLN E + +   A EA  S++ +  T+        + +     Q   S+     +  
Sbjct:   613 PFMWLNQENDHNTSHATEA-RSKSDKPPTSFSCLQAEQMQRTANATQKIISEIGTLASSS 671

Query:   463 CYERPDXXXXXXXXXXXXXXXXAIQNSKFLRELRTPLLEIDNSQEACQ--------QNKE 514
             C +                   AI ++  L    T  +E D S E  +         NK+
Sbjct:   672 CAQSEQVQKAATAFQKQNTEAEAIMSTP-LSNSTTVTIENDKSLEELKTPLLVPSSSNKQ 730

Query:   515 ELSECQSPSATSSTQSEKQMIGI-EEDDSRLKKPGRRARMLDLGKNMKEKLEEKRRHIEE 573
             E +   S    S+ QS  + +   EEDDSR KK GRRARMLDLGK M EKLEEKRRH+EE
Sbjct:   731 ETNSRGSSREVSAVQSPSRSVASSEEDDSRGKKQGRRARMLDLGKKMGEKLEEKRRHMEE 790

Query:   574 KGRHIVEKMRGP 585
             K R IVEKMRGP
Sbjct:   791 KSRQIVEKMRGP 802


GO:0005543 "phospholipid binding" evidence=IEA
GO:0007165 "signal transduction" evidence=ISS
GO:0035091 "phosphatidylinositol binding" evidence=ISS
TAIR|locus:2197269 AT1G73200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|J9P462 TEX2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1305112 Tex2 "testis expressed 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070615-7 tex2 "testis expressed 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J3KRZ8 TEX2 "Testis-expressed sequence 2 protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:102465 Tex2 "testis expressed gene 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V9L1 Tex2 "Protein Tex2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NX58 LOC416541 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F6XFT8 TEX2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.01840040
hypothetical protein (802 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
pfam1029691 pfam10296, DUF2404, Putative integral membrane pro 9e-24
>gnl|CDD|192522 pfam10296, DUF2404, Putative integral membrane protein conserved region (DUF2404) Back     alignment and domain information
 Score = 94.9 bits (237), Expect = 9e-24
 Identities = 30/89 (33%), Positives = 50/89 (56%)

Query: 131 NLLIFRLFFDAKINVGVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRV 190
           N LI RLFFD      +++ I+ +IQ+ LS ++ P ++GE+  TDID G   P++    +
Sbjct: 1   NALIGRLFFDLLRTEALENFIREKIQKKLSKIKKPGFLGELTLTDIDVGTSAPFITNPSL 60

Query: 191 LPTDMNEVWAFEVDIEYAGGVVLDVETRL 219
                +     + DI Y GG+ L +ET++
Sbjct: 61  PELSPDGELWVDFDILYRGGLSLTIETKV 89


This domain is conserved from plants to humans. The function is not known. Length = 91

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 585
KOG2238795 consensus Uncharacterized conserved protein TEX2, 100.0
PF1029691 DUF2404: Putative integral membrane protein conser 99.92
KOG2238795 consensus Uncharacterized conserved protein TEX2, 99.85
COG5038 1227 Ca2+-dependent lipid-binding protein, contains C2 99.18
KOG3532 1051 consensus Predicted protein kinase [General functi 99.13
>KOG2238 consensus Uncharacterized conserved protein TEX2, contains PH domain [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=2.3e-53  Score=468.82  Aligned_cols=532  Identities=37%  Similarity=0.545  Sum_probs=422.3

Q ss_pred             CCCcccccccccccccCCCChhHHHHHHHHHHhhhcCCcccccccccCcchhhhhhhcc--ccC----CCCCcccccccc
Q 007906            5 SPSMGLIADPMEKASRYDGSSSKVRLLWKKLARKASKPCIESKALSSYSGREERKVYEK--FRP----FQDSVLGATSVK   78 (585)
Q Consensus         5 ~~~~~~~~~~~~~~~~~dg~~sk~r~~~k~~~~k~s~~~~~~~~~~~~~~~~~~k~~~~--~~~----~~~~~~~~~~~~   78 (585)
                      ||+.||+.|..|+..   |.+|||||+++||-.|.+..++--.      ++++.|++.-  .-+    ..+-+|....+ 
T Consensus       234 k~~~~~s~e~~dk~t---t~s~~Vrl~g~~~~~k~~~k~v~k~------a~~dp~~~~~~~q~s~~~~~s~i~l~pk~~-  303 (795)
T KOG2238|consen  234 KPSSGFSSENLDKGT---THSSKVRLEGSMFSFKRSDKNVDKE------ARDDPTTNSSLSQNSYSNGSSTISLDPKRL-  303 (795)
T ss_pred             CccccCCcccccccc---ccceEEEecccceeEecccccccch------hhccccccccccccccccCCCceecCchhh-
Confidence            678889999999777   7889999999999999987654211      1555555542  222    11112222222 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCcccccccccc---cCCCCCcccCCchhHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 007906           79 SRTSKVPNCSGEENAEPLSSTFPRSKSQSQLSVVS---DADSDDKFIVDEATLCWNLLIFRLFFDAKINVGVKSSIQARI  155 (585)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~e~~~~dEst~WlNaLL~RLFfD~~rs~~~~~~Ik~KI  155 (585)
                                         +---|+.+..++....   +.|+..+...|++|.|+|++++|+|+++.+.....+.++++|
T Consensus       304 -------------------a~~~~~~tk~pi~ir~~sh~~ds~skte~d~~T~~ln~~~~rl~~~~k~~~~~~n~~~~r~  364 (795)
T KOG2238|consen  304 -------------------ANNRHWKTKVPIQIRFGSHDRDSESKTETDEGTLALNAVLGRLFLDLKQPTDLKNSSHERI  364 (795)
T ss_pred             -------------------hccccccccCceEEEecccccccccccccchhhhhhhhhcchhhhcccCCccccchHHHHH
Confidence                               2223334444444443   455777777799999999999999999999866999999999


Q ss_pred             HHHHccCCCCCCCCcEEEEEeecCCCCceeecccccccCCCCcEEEEEeEEEeCCeEEEEEEEEeeeeccccccccccCc
Q 007906          156 QRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTDMNEVWAFEVDIEYAGGVVLDVETRLEVRELDLHKGIVDANS  235 (585)
Q Consensus       156 QkKLskiklP~FI~eI~VteLdLG~s~P~Is~vrvp~lD~~G~wa~ElDV~Y~Gg~~LtIETkLnL~~l~~~~~~~~~n~  235 (585)
                      |+.++++|+|.|++++.+..++.|+.+|+|++++++++.+.|.|+++.||.|.|+.++.++|+|..+....+++++..-.
T Consensus       365 q~~y~~~Rt~~~~eelv~~~vd~~nl~p~i~~~~~l~~~~~gv~~~~~di~y~~d~~~~i~~~v~~~e~~~~~~ie~~~~  444 (795)
T KOG2238|consen  365 QRIYSKMRTPSYIEELVCRKVDTGNLPPLITSTRVLPVEMSGVWAFEIDIEYRGDLTIIIETRVDIREGSRQKGIEESLL  444 (795)
T ss_pred             HHHHhccccchhhhhhhhhhhhhcCCccccccceeEEeeccccccCccceeeccccccccccccchhhhhhcchhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988988887755


Q ss_pred             cccccCCCCccccchhhhh-cccccccCCCccCCCCCCCCCCCCCCCCCCCCCCCCccCCCCchhhhhh-hhcccceeec
Q 007906          236 EEAGAVGDVSSDLLEGFEY-FGKQLNISEGTFDGQDHKDQGDPKPDGLKNNRSTMPVSTSGSRWKSILN-SIAKQVSQVP  313 (585)
Q Consensus       236 ~~s~S~g~v~sdl~esie~-~G~~f~~s~~s~ds~e~~~~~~~k~d~~~~s~st~~~s~~~sRfk~iv~-sIAe~VS~vP  313 (585)
                      . +...+.+.+.+++++.+ |.+++.+...+.+.+....+..-. ++.+.+..+...++..++|+++|. +|+.++++.|
T Consensus       445 q-p~k~~~~~s~l~~~~~d~~~kq~~~~~~t~~~~~~~~~~~vs-~~sK~~~~t~~~~~~~s~~~~~L~~ri~~~f~~d~  522 (795)
T KOG2238|consen  445 Q-PKKIELVKSPLLEGLKDPFEKQIWVPFSTVSAQDVESESIVS-DESKLSEGTKTISAEKSKWKSALKERIVEQFSDDP  522 (795)
T ss_pred             C-cchhcccCchhhhhccchhhhceeeeccccCCCccccccccc-ccccCCCCCcchhhhhhhhHHHhhhheeecccCCc
Confidence            4 77788999999998876 888877776666655544432111 345556666666788899998776 5999999999


Q ss_pred             EEEEEEEEEEEEEEEEEecCCCCCcEEEEeecCCceEEEEEecccceeechhHHHHHHHHHHHHHHHhhcccCCCCcccc
Q 007906          314 ISLSIRVAALRGTLRLHIKPPPSDQLWFGFTSMPDIEFAMESSVGDHKITSGQVALFLINRFKASIRETMVLPNCESVSV  393 (585)
Q Consensus       314 L~LsV~L~sLsGtLrV~IpPPPSDRlWygF~~~P~LeL~ieP~VGeR~It~~~Vt~~IenkLk~~I~e~lVLPNmdDi~I  393 (585)
                      +.|.+....|+|+|..+..|||++++|+||..+|+|.+...|.||++.+++.+++....++++..++..|+||+|++  +
T Consensus       523 ~~ls~~~s~lr~kl~~~~~P~~~~~l~~~~ta~pdi~~~~~~~v~e~~~~~~d~~ms~~~~~~~~~rt~~nL~~l~s--~  600 (795)
T KOG2238|consen  523 IWLSIVSSSLRGKLWEHMKPPPSDQLWFGFTAAPDILQALASKVGEHKITGGDVAMSYIGRFLTALRTKMNLPKLQS--I  600 (795)
T ss_pred             eeecchhhhhhheehhccCCchhhhhhhccccchhHHHHhhhhhcccccccchHHHHHHhhHHHHHHhhhccccccc--c
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999  9


Q ss_pred             cCccCCCCCCccCCCcCceeecCCCCCCCCccccccccCccccccccccccccccCcccccccCCCCCcCCCCCCC-C--
Q 007906          394 PWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSIDQPEQKNQNSKNLDCYERPDT-V--  470 (585)
Q Consensus       394 P~M~s~~dd~vp~~~~p~iw~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--  470 (585)
                      |||.+++++||.+..++|+|++..  +.++.+....++.+|.++....+..+..+.+..++.|+++..+.+.+..+ +  
T Consensus       601 p~v~aek~~~V~r~~at~~~~~~s--d~d~~ss~es~s~~Dk~~~~~~~~~~~~~E~t~~~~q~~kI~~~vd~~~s~s~~  678 (795)
T KOG2238|consen  601 PWVAAEKDDWVTRTTATFRDLSSS--DSDTPSSKESSSSEDKPPRPFGDNVGSDMEGTVNIDQKKKIDDSVDERESQSES  678 (795)
T ss_pred             cceeeecccceeeecccchhcccc--ccCCccccccccccccCCCCccccccccccccccccccchhhhhhhhccccchh
Confidence            999999999999999999999994  34455556667777877776666555677888888888777555544211 1  


Q ss_pred             --------CcccccCCCCCCCccccCchhhhhhccccccccch--HH-HHhhccc-ccc-ccCCCCCCCccccccccccc
Q 007906          471 --------SKVTSIPSTSSSTPAIQNSKFLRELRTPLLEIDNS--QE-ACQQNKE-ELS-ECQSPSATSSTQSEKQMIGI  537 (585)
Q Consensus       471 --------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~-~~~-~~~s~~~~~~~~~~~~~~~~  537 (585)
                              ...-. +.-.|++|.+.++..+||+++||++|.-+  ++ ..++.+. ... --||+..        +..++
T Consensus       679 ~qka~~~~ai~r~-i~~~s~tpL~~~~~~vEe~k~~l~~N~p~ppsd~~~~~~r~~~~~~~k~sps~--------g~~s~  749 (795)
T KOG2238|consen  679 FQKAAKAEAIRRP-IEDVSNTPLVLLDPEVEELKGPLTENIPPPPSDRNWRGFRRAPIEKLKQSPSS--------GDRSV  749 (795)
T ss_pred             hccchhHHhhhcC-ccccCCCchhccChhhhhhcCCCcCCCCCCchhhhhhcccccchhhhccCCcc--------CCccc
Confidence                    11112 56789999999999999999999985443  33 3333333 111 1244330        22234


Q ss_pred             ccccc--cccCccc-chhhchhhhhhhHHHHHHHHhHHHhhhhhhhhccCC
Q 007906          538 EEDDS--RLKKPGR-RARMLDLGKNMKEKLEEKRRHIEEKGRHIVEKMRGP  585 (585)
Q Consensus       538 ~~~d~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~iv~kmr~~  585 (585)
                      +.+|.  ..||+|| +++|++++++|+|++|++||     ++.+|||||||
T Consensus       750 ~l~~~~~~ikk~~rq~~q~~~~~p~m~e~~e~v~~-----~~p~vek~r~p  795 (795)
T KOG2238|consen  750 ELDDVDPWIKKKLRQSAQKFDVKPNMDEKNEPVRR-----SDPPVEKMRGP  795 (795)
T ss_pred             ccccccHHHHHHHHhhhhccccCcccchhcccccc-----CCCcchhccCC
Confidence            45555  8889999 99999999999999999999     99999999998



>PF10296 DUF2404: Putative integral membrane protein conserved region (DUF2404); InterPro: IPR019411 This is entry represents a domain of unknown function found in mitochondrial distribution and morphology proteins Mdm12 and Mdm34, and in maintenance of mitochondrial morphology protein Mmm1 Back     alignment and domain information
>KOG2238 consensus Uncharacterized conserved protein TEX2, contains PH domain [General function prediction only] Back     alignment and domain information
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>KOG3532 consensus Predicted protein kinase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.2 bits (119), Expect = 2e-06
 Identities = 66/540 (12%), Positives = 125/540 (23%), Gaps = 185/540 (34%)

Query: 31  LWKKLARKASKPCIESKALSSYSGREERKVYEKFRPFQDSVLGATSVKSRTSKVPNCSGE 90
           L   +  +  +P + ++       R      + F  +         V SR          
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN-QVFAKYN--------V-SRLQPY-----L 138

Query: 91  ENAEPLSSTFPRS-----------KSQSQLSVVSDADSDDKFIVDEATLCWNLLIFRLFF 139
           +  + L    P             K+   L V        K              F++F+
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD------------FKIFW 186

Query: 140 DAKINVGVKSSIQARI---------------QRALSNMRTPSYIGEIICTDIDTGNLPPY 184
              +N+   +S +  +                R+  +      I  I           PY
Sbjct: 187 ---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 185 VHGMRVLPTDMNEVW------AFEV---------DIEYAGGVVLDVETRLEVRELDLHKG 229
            + + VL      V       AF +           +      L   T   +        
Sbjct: 244 ENCLLVL--L--NVQNAKAWNAFNLSCKILLTTRFKQVTD--FLSAATTTHISLDHHSMT 297

Query: 230 IVDANSEE--AGAVGDVSSDL-------------------------LEGFEYFG--KQLN 260
           +     +      +     DL                          + +++    K   
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 261 ISEGTFDGQDHKDQGDPK---------PDGLKNNRSTMPVSTSGSRWK--------SILN 303
           I E + +  +  +    +         P         +P       W          ++N
Sbjct: 358 IIESSLNVLEPAEY---RKMFDRLSVFPPSAH-----IPTILLSLIWFDVIKSDVMVVVN 409

Query: 304 SIAKQ--VSQVPISLSIRVAAL--------RGTLRLHIK-----------------PPPS 336
            + K   V + P   +I + ++             LH                   PP  
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 337 DQLWFGFTSMPDIEFAMESSVGDHKITSGQV-------ALFLINRF-KASIRETMVLPNC 388
           DQ ++               +G H               +FL  RF +  IR      N 
Sbjct: 470 DQYFYSH-------------IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 389 ESVSVPWMSAEKDDWVPRNVAPFIWLNHEANSDQVPACEAFSSQTTEVKTTMEATSVTSI 448
               +  +         +   P+I  N       V A   F  +  E     + T +  I
Sbjct: 517 SGSILNTLQ----QL--KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00