Citrus Sinensis ID: 007911
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | 2.2.26 [Sep-21-2011] | |||||||
| F4J2K2 | 625 | Folylpolyglutamate syntha | yes | no | 0.969 | 0.907 | 0.636 | 0.0 | |
| F4K2A1 | 571 | Folylpolyglutamate syntha | no | no | 0.863 | 0.884 | 0.503 | 1e-145 | |
| Q8W035 | 492 | Folylpolyglutamate syntha | no | no | 0.830 | 0.987 | 0.471 | 1e-137 | |
| Q05932 | 587 | Folylpolyglutamate syntha | yes | no | 0.842 | 0.839 | 0.347 | 4e-80 | |
| A6H751 | 585 | Folylpolyglutamate syntha | yes | no | 0.832 | 0.832 | 0.338 | 3e-78 | |
| Q924L9 | 587 | Folylpolyglutamate syntha | yes | no | 0.844 | 0.841 | 0.339 | 7e-75 | |
| P48760 | 587 | Folylpolyglutamate syntha | yes | no | 0.841 | 0.838 | 0.349 | 2e-73 | |
| Q54CY5 | 626 | Putative folylpolyglutama | yes | no | 0.854 | 0.798 | 0.323 | 5e-72 | |
| Q09509 | 510 | Putative folylpolyglutama | yes | no | 0.570 | 0.654 | 0.371 | 2e-62 | |
| Q9Y893 | 514 | Folylpolyglutamate syntha | N/A | no | 0.8 | 0.910 | 0.304 | 8e-61 |
| >sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS2 PE=1 SV=1 | Back alignment and function desciption |
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Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/586 (63%), Positives = 447/586 (76%), Gaps = 19/586 (3%)
Query: 2 SSQVKGKTVSNALTTEYEENLPLSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMS 61
S +V K N + E + + P SSY++AM+ALS+LI+R+ RG+++ G KL+++
Sbjct: 57 SIEVVEKAAINMGSKEDKADNPALSSYDDAMEALSTLISRRNRGDRTPTKGNRDKLEQVV 116
Query: 62 MYLKILGLEDRIAELKVIHVSGTKGKGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFR 121
YLKIL LED+I ELKVIHV+GTKGKGSTC F EAILR CGFRTG+FTSPHLIDVRERFR
Sbjct: 117 TYLKILDLEDKIKELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFR 176
Query: 122 INGLDITEDKFLFYFWECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVG 181
I+GLDI+E+KFL YFWECW LL+E + L MPPLFQFLTVLAFKIFVCE+VDVA+IEVG
Sbjct: 177 IDGLDISEEKFLQYFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVG 236
Query: 182 LGGEKDSTNVIKEPVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEA 241
LGG+ DSTNVI++PVVCG+ SLGMDHM++LGNTL DIAFHKAGIFKPQIPAFTVPQLSEA
Sbjct: 237 LGGKLDSTNVIQKPVVCGIASLGMDHMDILGNTLADIAFHKAGIFKPQIPAFTVPQLSEA 296
Query: 242 MSVLQDRALELMVPLEVAAPLDIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWE 301
M VLQ A L VPLEV APL+ +KL + L LSGDHQLVNAGLAVSLS CWL+RTGNW+
Sbjct: 297 MDVLQKTANNLEVPLEVVAPLEPKKLDGVTLGLSGDHQLVNAGLAVSLSRCWLQRTGNWK 356
Query: 302 KVSHNDGQGADLPDAFVRGLSTAHLLGRAQIVYDISLVP-NSSGLFENSSGELIFYLDGA 360
K+ N+ + ++P AF RGL+TA L GRAQ+V+D+ P +SS E G+LIFYLDGA
Sbjct: 357 KIFPNESKETEIPVAFCRGLATARLHGRAQVVHDVVSDPQDSSDSMETPCGDLIFYLDGA 416
Query: 361 HTAESMEACAKWFSSVVKGSGNSSLSSMSSTTKTNNMEEVVQRNGYIGHKMEKTKHANKI 420
H+ ESMEAC +WFSS V+ G+ SLS+ NGY+ H E N++
Sbjct: 417 HSPESMEACGRWFSSAVR--GDKSLSTAV--------------NGYMRHG-EYGTDLNRV 459
Query: 421 SKQILLFNCMEARHPQVLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAIS 480
SKQILLFNCME R PQVLLP+LV+TCASSGTHFS+ALFVPS+STY+KV SG+S IP
Sbjct: 460 SKQILLFNCMEVRDPQVLLPKLVTTCASSGTHFSRALFVPSMSTYNKVISGASAIPSDTR 519
Query: 481 GKDLSWQFSLQRLWERIIHGADPVLEKSSMKESTEILPPCKFLYEDAPLC-SPAEECFAC 539
KDL+WQF LQRLWE+ I G D L+ + + LPP FL DAP C PA
Sbjct: 520 RKDLTWQFRLQRLWEKSIQGTDAGLDHTLKPDGITALPPHDFLCGDAPQCGGPAGTPVTS 579
Query: 540 SAVIPSLPLTIKWLRDSVQENPSIRVQVLVTGSLHLVGDVLKLLKR 585
SAV+PSLPLTI WLRD V+ NPS++++VLVTGSLHLVGDVL+LLKR
Sbjct: 580 SAVMPSLPLTINWLRDCVRRNPSLKLEVLVTGSLHLVGDVLRLLKR 625
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Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: 1EC: 7 |
| >sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8W035|FPGS3_ARATH Folylpolyglutamate synthase OS=Arabidopsis thaliana GN=FPGS3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q05932|FOLC_HUMAN Folylpolyglutamate synthase, mitochondrial OS=Homo sapiens GN=FPGS PE=1 SV=3 | Back alignment and function description |
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| >sp|A6H751|FOLC_BOVIN Folylpolyglutamate synthase, mitochondrial OS=Bos taurus GN=FPGS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q924L9|FOLC_CRIGR Folylpolyglutamate synthase, mitochondrial OS=Cricetulus griseus GN=FPGS PE=2 SV=1 | Back alignment and function description |
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| >sp|P48760|FOLC_MOUSE Folylpolyglutamate synthase, mitochondrial OS=Mus musculus GN=Fpgs PE=1 SV=3 | Back alignment and function description |
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| >sp|Q54CY5|FOLC_DICDI Putative folylpolyglutamate synthase OS=Dictyostelium discoideum GN=folC PE=3 SV=1 | Back alignment and function description |
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| >sp|Q09509|FOLC_CAEEL Putative folylpolyglutamate synthase OS=Caenorhabditis elegans GN=F25B5.6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9Y893|FOLE_CANAX Folylpolyglutamate synthase OS=Candida albicans GN=MET7 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | ||||||
| 225441349 | 570 | PREDICTED: folylpolyglutamate synthase, | 0.962 | 0.987 | 0.711 | 0.0 | |
| 297739883 | 673 | unnamed protein product [Vitis vinifera] | 0.982 | 0.854 | 0.699 | 0.0 | |
| 224086916 | 588 | folylpolyglutamate synthase [Populus tri | 0.998 | 0.993 | 0.677 | 0.0 | |
| 224137770 | 581 | folylpolyglutamate synthase [Populus tri | 0.986 | 0.993 | 0.682 | 0.0 | |
| 79396625 | 625 | DHFS-FPGS homolog C [Arabidopsis thalian | 0.969 | 0.907 | 0.636 | 0.0 | |
| 17976757 | 625 | folylpolyglutamate synthetase, mitochond | 0.969 | 0.907 | 0.633 | 0.0 | |
| 356537507 | 658 | PREDICTED: folylpolyglutamate synthase, | 0.974 | 0.866 | 0.634 | 0.0 | |
| 449437789 | 558 | PREDICTED: folylpolyglutamate synthase-l | 0.947 | 0.992 | 0.646 | 0.0 | |
| 449494729 | 558 | PREDICTED: folylpolyglutamate synthase-l | 0.947 | 0.992 | 0.646 | 0.0 | |
| 255578463 | 581 | folylpolyglutamate synthase, putative [R | 0.822 | 0.827 | 0.716 | 0.0 |
| >gi|225441349|ref|XP_002274685.1| PREDICTED: folylpolyglutamate synthase, mitochondrial [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/572 (71%), Positives = 469/572 (81%), Gaps = 9/572 (1%)
Query: 15 TTEYEENLPLSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIA 74
T E E LPLSSSYE AM+ALSSLIT QKRG +S ++G+YGKL RMSMYLKILGLE++IA
Sbjct: 7 TIECSEELPLSSSYEMAMEALSSLITSQKRGGRSSVSGKYGKLDRMSMYLKILGLEEKIA 66
Query: 75 ELKVIHVSGTKGKGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFRINGLDITEDKFLF 134
LK+IHV+GTKGKGSTCTFCEAILRECGFRTGLF SPHLIDVRER RI+GLDI+E+KFL
Sbjct: 67 GLKIIHVAGTKGKGSTCTFCEAILRECGFRTGLFISPHLIDVRERLRIDGLDISEEKFLM 126
Query: 135 YFWECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVGLGGEKDSTNVIKE 194
+FW+CW+ L+E VT DLPMPPLFQFL+VLAFKIF CE+VDVAIIEVGLGG++DSTNVIKE
Sbjct: 127 HFWDCWNRLKEKVTNDLPMPPLFQFLSVLAFKIFTCEEVDVAIIEVGLGGKRDSTNVIKE 186
Query: 195 PVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMV 254
PVVCG+TSLGMDH E LG+TL IA HKAGIFKPQIPAFTVPQLSEAM VLQ RA EL V
Sbjct: 187 PVVCGITSLGMDHTETLGDTLGKIASHKAGIFKPQIPAFTVPQLSEAMDVLQQRAHELEV 246
Query: 255 PLEVAAPLDIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHNDGQGADLP 314
PLEVAAPLD + LK L+LSLSGDHQ +NAGLAVSL +CWL+ TGNWEK+ N Q DL
Sbjct: 247 PLEVAAPLDHKNLKGLKLSLSGDHQFINAGLAVSLCKCWLQSTGNWEKLLKNANQEDDLL 306
Query: 315 DAFVRGLSTAHLLGRAQIVYDISLVP-NSSGLFENSSGELIFYLDGAHTAESMEACAKWF 373
+AF+RGLSTA L GRAQ VYD L N S ENS G+LIFYLDGAH+ ESM+ CA+WF
Sbjct: 307 EAFLRGLSTARLSGRAQTVYDTPLKSYNLSEATENSFGDLIFYLDGAHSPESMDVCARWF 366
Query: 374 SSVVKGSGNSSLSSMSSTTKTNNMEEVVQRNGYIGHKMEKTKHANKISKQILLFNCMEAR 433
S+ VK NS SS K NM NGYI HK E T+ +NKISKQILLFNCME R
Sbjct: 367 SNAVKERRNSPSSSF---VKVGNM-----VNGYIHHKKEDTEESNKISKQILLFNCMEVR 418
Query: 434 HPQVLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAISGKDLSWQFSLQRL 493
P +LLP+LV TCASSGTHFSKALFVPS+STY+KVTSG S +PL + +DLSWQF+LQR+
Sbjct: 419 DPHILLPQLVRTCASSGTHFSKALFVPSISTYNKVTSGDSIVPLDLPARDLSWQFNLQRI 478
Query: 494 WERIIHGADPVLEKSSMKESTEILPPCKFLYEDAPLCSPAEECFACSAVIPSLPLTIKWL 553
WE+IIH D V+++S +S ILPP +FLYE+ SP+ +C + SAV+PSLPLTI+WL
Sbjct: 479 WEKIIHNKDVVVDESFKMDSPRILPPFEFLYENGSSGSPSSKCLSSSAVMPSLPLTIRWL 538
Query: 554 RDSVQENPSIRVQVLVTGSLHLVGDVLKLLKR 585
RD V+ENPS+R+QVLVTGSLHLVGDVLKLL+R
Sbjct: 539 RDCVKENPSLRLQVLVTGSLHLVGDVLKLLRR 570
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297739883|emb|CBI30065.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224086916|ref|XP_002308003.1| folylpolyglutamate synthase [Populus trichocarpa] gi|222853979|gb|EEE91526.1| folylpolyglutamate synthase [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224137770|ref|XP_002322647.1| folylpolyglutamate synthase [Populus trichocarpa] gi|222867277|gb|EEF04408.1| folylpolyglutamate synthase [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|79396625|ref|NP_187627.3| DHFS-FPGS homolog C [Arabidopsis thaliana] gi|363579869|sp|F4J2K2.1|FPGS2_ARATH RecName: Full=Folylpolyglutamate synthase; AltName: Full=DHFS-FPGS homolog C; AltName: Full=Folylpoly-gamma-glutamate synthetase; Short=FPGS; AltName: Full=Tetrahydrofolylpolyglutamate synthase; Short=Tetrahydrofolate synthase gi|332641345|gb|AEE74866.1| DHFS-FPGS homolog C [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|17976757|emb|CAC81075.1| folylpolyglutamate synthetase, mitochondrial isoform [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356537507|ref|XP_003537268.1| PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449437789|ref|XP_004136673.1| PREDICTED: folylpolyglutamate synthase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449494729|ref|XP_004159630.1| PREDICTED: folylpolyglutamate synthase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255578463|ref|XP_002530096.1| folylpolyglutamate synthase, putative [Ricinus communis] gi|223530407|gb|EEF32295.1| folylpolyglutamate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 585 | ||||||
| TAIR|locus:2100048 | 625 | DFC "DHFS-FPGS homolog C" [Ara | 0.969 | 0.907 | 0.624 | 2.7e-187 | |
| TAIR|locus:2153639 | 571 | DFB "DHFS-FPGS homolog B" [Ara | 0.572 | 0.586 | 0.570 | 7.1e-141 | |
| TAIR|locus:2078936 | 492 | DFD "DHFS-FPGS homolog D" [Ara | 0.531 | 0.632 | 0.546 | 5.7e-119 | |
| UNIPROTKB|Q05932 | 587 | FPGS "Folylpolyglutamate synth | 0.576 | 0.574 | 0.443 | 1.2e-75 | |
| UNIPROTKB|A6H751 | 585 | FPGS "Folylpolyglutamate synth | 0.581 | 0.581 | 0.419 | 9.7e-74 | |
| UNIPROTKB|E2RRC8 | 588 | FPGS "Folylpolyglutamate synth | 0.562 | 0.559 | 0.434 | 1.6e-73 | |
| ZFIN|ZDB-GENE-040426-2781 | 572 | fpgs "folylpolyglutamate synth | 0.572 | 0.585 | 0.439 | 2.5e-73 | |
| MGI|MGI:95576 | 587 | Fpgs "folylpolyglutamyl synthe | 0.574 | 0.572 | 0.432 | 8.6e-73 | |
| UNIPROTKB|E1B859 | 430 | FPGS "Folylpolyglutamate synth | 0.581 | 0.790 | 0.419 | 4.7e-70 | |
| WB|WBGene00017777 | 510 | F25B5.6 [Caenorhabditis elegan | 0.567 | 0.650 | 0.384 | 6.4e-66 |
| TAIR|locus:2100048 DFC "DHFS-FPGS homolog C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1816 (644.3 bits), Expect = 2.7e-187, P = 2.7e-187
Identities = 366/586 (62%), Positives = 437/586 (74%)
Query: 2 SSQVKGKTVSNALTTEYEENLPLSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMS 61
S +V K N + E + + P SSY++AM+ALS+LI+R+ RG+++ G KL+++
Sbjct: 57 SIEVVEKAAINMGSKEDKADNPALSSYDDAMEALSTLISRRNRGDRTPTKGNRDKLEQVV 116
Query: 62 MYLKILGLEDRIAELKVIHVSGTKGKGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFR 121
YLKIL LED+I ELKVIHV+GTKGKGSTC F EAILR CGFRTG+FTSPHLIDVRERFR
Sbjct: 117 TYLKILDLEDKIKELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFR 176
Query: 122 INGLDITEDKFLFYFWECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVG 181
I+GLDI+E+KFL YFWECW LL+E + L MPPLFQFLTVLAFKIFVCE+VDVA+IEVG
Sbjct: 177 IDGLDISEEKFLQYFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVG 236
Query: 182 LGGEKDSTNVIKEPVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEA 241
LGG+ DSTNVI++PVVCG+ SLGMDHM++LGNTL DIAFHKAGIFKPQIPAFTVPQLSEA
Sbjct: 237 LGGKLDSTNVIQKPVVCGIASLGMDHMDILGNTLADIAFHKAGIFKPQIPAFTVPQLSEA 296
Query: 242 MSVLQDRALELMVPLEVAAPLDIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWE 301
M VLQ A L VPLEV APL+ +KL + L LSGDHQLVNAGLAVSLS CWL+RTGNW+
Sbjct: 297 MDVLQKTANNLEVPLEVVAPLEPKKLDGVTLGLSGDHQLVNAGLAVSLSRCWLQRTGNWK 356
Query: 302 KVSHNDGQGADLPDAFVRGLSTAHLLGRAQIVYDISLVP-NSSGLFENSSGELIFYLDGA 360
K+ N+ + ++P AF RGL+TA L GRAQ+V+D+ P +SS E G+LIFYLDGA
Sbjct: 357 KIFPNESKETEIPVAFCRGLATARLHGRAQVVHDVVSDPQDSSDSMETPCGDLIFYLDGA 416
Query: 361 HTAESMEACAKWFXXXXXXXXXXXXXXXXXXXXXXXXEEVVQRNGYIGHKMEKTKHANKI 420
H+ ESMEAC +WF NGY+ H E N++
Sbjct: 417 HSPESMEACGRWFSSAVRGDKSLSTAV----------------NGYMRHG-EYGTDLNRV 459
Query: 421 SKQILLFNCMEARHPQVLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAIS 480
SKQILLFNCME R PQVLLP+LV+TCASSGTHFS+ALFVPS+STY+KV SG+S IP
Sbjct: 460 SKQILLFNCMEVRDPQVLLPKLVTTCASSGTHFSRALFVPSMSTYNKVISGASAIPSDTR 519
Query: 481 GKDLSWQFSLQRLWERIIHGADPVLEKSSMKESTEILPPCKFLYEDAPLCS-PAEECFAC 539
KDL+WQF LQRLWE+ I G D L+ + + LPP FL DAP C PA
Sbjct: 520 RKDLTWQFRLQRLWEKSIQGTDAGLDHTLKPDGITALPPHDFLCGDAPQCGGPAGTPVTS 579
Query: 540 SAVIPSLPLTIKWLRDSVQENPSIRVQVLVTGSLHLVGDVLKLLKR 585
SAV+PSLPLTI WLRD V+ NPS++++VLVTGSLHLVGDVL+LLKR
Sbjct: 580 SAVMPSLPLTINWLRDCVRRNPSLKLEVLVTGSLHLVGDVLRLLKR 625
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| TAIR|locus:2153639 DFB "DHFS-FPGS homolog B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2078936 DFD "DHFS-FPGS homolog D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q05932 FPGS "Folylpolyglutamate synthase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A6H751 FPGS "Folylpolyglutamate synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RRC8 FPGS "Folylpolyglutamate synthase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2781 fpgs "folylpolyglutamate synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:95576 Fpgs "folylpolyglutamyl synthetase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1B859 FPGS "Folylpolyglutamate synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| WB|WBGene00017777 F25B5.6 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q05932 | FOLC_HUMAN | 6, ., 3, ., 2, ., 1, 7 | 0.3470 | 0.8427 | 0.8398 | yes | no |
| A6H751 | FOLC_BOVIN | 6, ., 3, ., 2, ., 1, 7 | 0.3382 | 0.8324 | 0.8324 | yes | no |
| Q924L9 | FOLC_CRIGR | 6, ., 3, ., 2, ., 1, 7 | 0.3394 | 0.8444 | 0.8415 | yes | no |
| F4J2K2 | FPGS2_ARATH | 6, ., 3, ., 2, ., 1, 7 | 0.6365 | 0.9692 | 0.9072 | yes | no |
| P48760 | FOLC_MOUSE | 6, ., 3, ., 2, ., 1, 7 | 0.3494 | 0.8410 | 0.8381 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.2.17 | 0.824 |
| 3rd Layer | 6.3.2 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00025328001 | SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (570 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00030018001 | • | • | • | • | 0.955 | |||||
 | GSVIVG00036344001 | • | • | 0.915 | |||||||
 | GSVIVG00014568001 | • | • | 0.914 | |||||||
 | GSVIVG00027851001 | • | • | 0.909 | |||||||
 | GSVIVG00014289001 | • | • | 0.588 | |||||||
 | GSVIVG00019724001 | • | • | 0.478 | |||||||
 | GSVIVG00005777001 | • | • | 0.448 | |||||||
 | GSVIVG00026904001 | • | 0.402 | ||||||||
 | GSVIVG00001677001 | • | • | 0.401 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 585 | |||
| PLN02881 | 530 | PLN02881, PLN02881, tetrahydrofolylpolyglutamate s | 0.0 | |
| TIGR01499 | 398 | TIGR01499, folC, folylpolyglutamate synthase/dihyd | 6e-96 | |
| COG0285 | 427 | COG0285, FolC, Folylpolyglutamate synthase [Coenzy | 4e-84 | |
| PLN02913 | 510 | PLN02913, PLN02913, dihydrofolate synthetase | 8e-43 | |
| PRK10846 | 416 | PRK10846, PRK10846, bifunctional folylpolyglutamat | 2e-29 | |
| TIGR04012 | 366 | TIGR04012, poly_gGlu_PgsB, poly-gamma-glutamate sy | 1e-06 | |
| COG0769 | 475 | COG0769, MurE, UDP-N-acetylmuramyl tripeptide synt | 8e-06 | |
| PRK00139 | 460 | PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-gluta | 1e-04 | |
| TIGR01085 | 464 | TIGR01085, murE, UDP-N-acetylmuramyl-tripeptide sy | 2e-04 | |
| TIGR01087 | 433 | TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-gl | 0.002 |
| >gnl|CDD|215476 PLN02881, PLN02881, tetrahydrofolylpolyglutamate synthase | Back alignment and domain information |
|---|
Score = 849 bits (2195), Expect = 0.0
Identities = 316/569 (55%), Positives = 384/569 (67%), Gaps = 43/569 (7%)
Query: 17 EYEENLPLSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIAEL 76
E++ P S SYE A+ ALSSLIT++ R + S + + YLKIL LE+ I+ L
Sbjct: 5 ATEDDAPTSDSYEEALDALSSLITKKSRADPS---NPGDQFDLLFDYLKILELEEAISRL 61
Query: 77 KVIHVSGTKGKGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFRINGLDITEDKFLFYF 136
KVIHV+GTKGKGSTCTF E+ILR CGFRTGLFTSPHLIDVRERFR++G+DI+E+KFL YF
Sbjct: 62 KVIHVAGTKGKGSTCTFTESILRNCGFRTGLFTSPHLIDVRERFRLDGVDISEEKFLRYF 121
Query: 137 WECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVGLGGEKDSTNVIKEPV 196
W CW L+E TEDLPMP F+FLT+LAFKIF EQVDVAI+EVGLGG D+TNV+++PV
Sbjct: 122 WWCWDRLKEKTTEDLPMPAYFRFLTLLAFKIFSAEQVDVAILEVGLGGRLDATNVVQKPV 181
Query: 197 VCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVPL 256
VCG+TSLG DHME+LG+TL IA KAGIFKP +PAFTVPQ EAM VL++RA EL VPL
Sbjct: 182 VCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVPL 241
Query: 257 EVAAPLDIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHNDGQGADLPDA 316
+V PLD L L+L L+G+HQ +NAGLAV+L WL+RTG+ E + Q LP+
Sbjct: 242 QVVEPLDSYGLSGLKLGLAGEHQYLNAGLAVALCSTWLQRTGHEEFEALL--QAGTLPEQ 299
Query: 317 FVRGLSTAHLLGRAQIVYDISLVPNSSGLFENSSGELIFYLDGAHTAESMEACAKWFSSV 376
F++GLSTA L GRAQ+V D S + SG+L+FYLDGAH+ ESMEACA+WFSS
Sbjct: 300 FIKGLSTASLQGRAQVVPD-------SYINSEDSGDLVFYLDGAHSPESMEACARWFSSA 352
Query: 377 VKGSGNSSLSSMSSTTKTNNMEEVVQRNGYIGHKMEKTKHANKISKQILLFNCMEARHPQ 436
+KG S S G +NKIS+QILLFNCM R PQ
Sbjct: 353 IKGDEQSPGSGYGP-----------HGGGGKSED----TESNKISEQILLFNCMSVRDPQ 397
Query: 437 VLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAISGKDLSWQFSLQRLWER 496
+LLP L +TCAS+G F KALFVP++S Y+KV SG +P+ DLSWQF+LQR+WE
Sbjct: 398 LLLPPLANTCASNGVPFKKALFVPNISVYNKVGSG---LPVDDPQVDLSWQFTLQRVWES 454
Query: 497 IIHGADPVLEKSSMKESTEILPPCKFLYEDAPLCSPAEECFACSAVIPSLPLTIKWLRDS 556
+I G E A + SAV PSLPL IKWLRD
Sbjct: 455 LIRGKAGAPAD-------------AVCEESASSGLNDGKSDENSAVFPSLPLAIKWLRDC 501
Query: 557 VQENPSIRVQVLVTGSLHLVGDVLKLLKR 585
+ENPS+R QVLVTGSLHLVGDVL+LLK+
Sbjct: 502 ARENPSLRFQVLVTGSLHLVGDVLRLLKK 530
|
Length = 530 |
| >gnl|CDD|233440 TIGR01499, folC, folylpolyglutamate synthase/dihydrofolate synthase | Back alignment and domain information |
|---|
| >gnl|CDD|223362 COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|178501 PLN02913, PLN02913, dihydrofolate synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|182774 PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188527 TIGR04012, poly_gGlu_PgsB, poly-gamma-glutamate synthase PgsB/CapB | Back alignment and domain information |
|---|
| >gnl|CDD|223840 COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234660 PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233265 TIGR01085, murE, UDP-N-acetylmuramyl-tripeptide synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|233266 TIGR01087, murD, UDP-N-acetylmuramoylalanine--D-glutamate ligase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| PLN02881 | 530 | tetrahydrofolylpolyglutamate synthase | 100.0 | |
| KOG2525 | 496 | consensus Folylpolyglutamate synthase [Coenzyme tr | 100.0 | |
| COG0285 | 427 | FolC Folylpolyglutamate synthase [Coenzyme metabol | 100.0 | |
| PLN02913 | 510 | dihydrofolate synthetase | 100.0 | |
| TIGR01499 | 397 | folC folylpolyglutamate synthase/dihydrofolate syn | 100.0 | |
| PRK10846 | 416 | bifunctional folylpolyglutamate synthase/ dihydrof | 100.0 | |
| PRK00139 | 460 | murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-d | 100.0 | |
| PRK11929 | 958 | putative bifunctional UDP-N-acetylmuramoylalanyl-D | 100.0 | |
| PRK14022 | 481 | UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine l | 100.0 | |
| TIGR02068 | 864 | cya_phycin_syn cyanophycin synthetase. Cyanophycin | 100.0 | |
| TIGR01085 | 464 | murE UDP-N-acetylmuramyl-tripeptide synthetase. A | 100.0 | |
| COG0769 | 475 | MurE UDP-N-acetylmuramyl tripeptide synthase [Cell | 100.0 | |
| TIGR01143 | 417 | murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a | 100.0 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK03803 | 448 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK14093 | 479 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminop | 100.0 | |
| PRK10773 | 453 | murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a | 100.0 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 100.0 | |
| PRK03806 | 438 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK11929 | 958 | putative bifunctional UDP-N-acetylmuramoylalanyl-D | 100.0 | |
| PRK02006 | 498 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| TIGR01081 | 448 | mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl | 100.0 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| TIGR01087 | 433 | murD UDP-N-acetylmuramoylalanine--D-glutamate liga | 100.0 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK14573 | 809 | bifunctional D-alanyl-alanine synthetase A/UDP-N-a | 100.0 | |
| PRK11930 | 822 | putative bifunctional UDP-N-acetylmuramoyl-tripept | 100.0 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| TIGR01082 | 448 | murC UDP-N-acetylmuramate--alanine ligase. UDP-N-a | 100.0 | |
| PRK04690 | 468 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK01368 | 454 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 100.0 | |
| COG0770 | 451 | MurF UDP-N-acetylmuramyl pentapeptide synthase [Ce | 100.0 | |
| COG0771 | 448 | MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas | 99.98 | |
| COG0773 | 459 | MurC UDP-N-acetylmuramate-alanine ligase [Cell env | 99.97 | |
| PRK04663 | 438 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 99.97 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 99.97 | |
| PRK00683 | 418 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 99.96 | |
| PRK03815 | 401 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 99.94 | |
| PRK14016 | 727 | cyanophycin synthetase; Provisional | 99.93 | |
| PF08245 | 188 | Mur_ligase_M: Mur ligase middle domain; InterPro: | 99.92 | |
| PF02875 | 91 | Mur_ligase_C: Mur ligase family, glutamate ligase | 99.24 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 97.42 | |
| PF03308 | 266 | ArgK: ArgK protein; InterPro: IPR005129 Bacterial | 96.58 | |
| TIGR00750 | 300 | lao LAO/AO transport system ATPase. Mutations have | 96.04 | |
| PRK09435 | 332 | membrane ATPase/protein kinase; Provisional | 94.13 | |
| PHA02519 | 387 | plasmid partition protein SopA; Reviewed | 93.1 | |
| PRK13705 | 388 | plasmid-partitioning protein SopA; Provisional | 92.97 | |
| COG1072 | 283 | CoaA Panthothenate kinase [Coenzyme metabolism] | 91.26 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 91.07 | |
| PRK13869 | 405 | plasmid-partitioning protein RepA; Provisional | 90.83 | |
| COG0489 | 265 | Mrp ATPases involved in chromosome partitioning [C | 90.0 | |
| COG2403 | 449 | Predicted GTPase [General function prediction only | 89.01 | |
| TIGR03172 | 232 | probable selenium-dependent hydroxylase accessory | 88.73 | |
| COG1763 | 161 | MobB Molybdopterin-guanine dinucleotide biosynthes | 87.85 | |
| cd03114 | 148 | ArgK-like The function of this protein family is u | 87.68 | |
| TIGR01007 | 204 | eps_fam capsular exopolysaccharide family. This mo | 87.65 | |
| TIGR03029 | 274 | EpsG chain length determinant protein tyrosine kin | 87.45 | |
| TIGR03018 | 207 | pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t | 87.22 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 86.67 | |
| cd02117 | 212 | NifH_like This family contains the NifH (iron prot | 86.65 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 85.77 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a var | 85.67 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 85.04 | |
| cd02035 | 217 | ArsA ArsA ATPase functionas as an efflux pump loca | 84.44 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 84.37 | |
| PRK00652 | 325 | lpxK tetraacyldisaccharide 4'-kinase; Reviewed | 84.3 | |
| PHA02518 | 211 | ParA-like protein; Provisional | 82.31 | |
| TIGR03371 | 246 | cellulose_yhjQ cellulose synthase operon protein Y | 82.31 | |
| PF00448 | 196 | SRP54: SRP54-type protein, GTPase domain; InterPro | 81.74 | |
| PRK05439 | 311 | pantothenate kinase; Provisional | 81.31 | |
| TIGR03453 | 387 | partition_RepA plasmid partitioning protein RepA. | 81.27 | |
| PRK13235 | 274 | nifH nitrogenase reductase; Reviewed | 81.07 | |
| COG0132 | 223 | BioD Dethiobiotin synthetase [Coenzyme metabolism] | 80.38 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 80.12 |
| >PLN02881 tetrahydrofolylpolyglutamate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-107 Score=891.80 Aligned_cols=527 Identities=60% Similarity=0.958 Sum_probs=419.0
Q ss_pred hhhhccCCCcCcHHHHHHHHHhhhhhhhcCCCccccccCCChHHHHHHHHHhCCCCcccCccEEEEecCCCCchHHHHHH
Q 007911 16 TEYEENLPLSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIAELKVIHVSGTKGKGSTCTFCE 95 (585)
Q Consensus 16 ~~~~~~~~~~~~y~~a~~~L~~l~~~~~~~~~~~~~~~~~~l~~~~~~L~~Lg~~~p~~~l~vIhVTGTnGKgST~aml~ 95 (585)
-..+...+..++|++|+++|+++++++.+...... ..+|++|+++|++||+++|.+++++|||||||||||||+|++
T Consensus 4 ~~~~~~~~~~~~y~~a~~~L~sl~~~~~~~~~~~~---~~~L~rm~~~L~~LG~p~~~~~l~vIhVaGTnGKGSt~a~l~ 80 (530)
T PLN02881 4 MATEDDAPTSDSYEEALDALSSLITKKSRADPSNP---GDQFDLLFDYLKILELEEAISRLKVIHVAGTKGKGSTCTFTE 80 (530)
T ss_pred ccccccCccccCHHHHHHHHHhcccchhhcccccc---CCChHHHHHHHHHcCCCchhhcCCEEEEeCCCCHHHHHHHHH
Confidence 34456677888999999999999998665543333 378999999999999877778999999999999999999999
Q ss_pred HHHHHCCCCeEEEcCCccccccceEEECCEecCHHHHHHHHHHHHHhhhhhccCCCCCCCHHHHHHHHHHHHhhhCCCcE
Q 007911 96 AILRECGFRTGLFTSPHLIDVRERFRINGLDITEDKFLFYFWECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDV 175 (585)
Q Consensus 96 sIL~~~G~kvGl~tSPhL~~~rERI~inG~~is~~~f~~~f~~v~~~l~~~~~~~~~~ps~Fe~lTllA~~~F~~~~vd~ 175 (585)
+||+++|+|||+||||||+++||||+|||.+|+++.|.++||+||++++.......+.|+|||++|+|||++|.+++||+
T Consensus 81 siL~~~G~rvGl~tSPhL~~~rERiring~~Is~e~f~~~f~~v~~~l~~~~~~~~~~pt~Fe~lTlla~~~F~~~~vD~ 160 (530)
T PLN02881 81 SILRNCGFRTGLFTSPHLIDVRERFRLDGVDISEEKFLRYFWWCWDRLKEKTTEDLPMPAYFRFLTLLAFKIFSAEQVDV 160 (530)
T ss_pred HHHHHCCCCEEEECCCccCcceeEEEECCEecCHHHHHHHHHHHHHHHHHhcccccCCCcHHHHHHHHHHHHHHhCCCCE
Confidence 99999999999999999999999999999999999999999999999997654555679999999999999999999999
Q ss_pred EEEeecCCCCccccccccCCcEEEEcCCCcccccccCCCHHHHHHHHhcccCCCCcEEeeCCchHHHHHHHHHHHhcCcc
Q 007911 176 AIIEVGLGGEKDSTNVIKEPVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVP 255 (585)
Q Consensus 176 aVlEvG~gGr~D~Tnvi~~P~vavITNIg~DHld~lG~Tle~IA~~KagI~k~g~~aV~~~qd~~~~~vl~~~a~~~~~~ 255 (585)
+|||||+|||+|+||++.+|+++|||||++||+++||+|+++|||+|+||||+|.|+|+.+|+++++++++++|++++++
T Consensus 161 aVlEvGlgGr~DaTnvi~~p~v~vITnIg~DH~~~LG~Tle~IA~~KagI~k~g~p~vt~~q~~ea~~vl~~~A~e~~a~ 240 (530)
T PLN02881 161 AILEVGLGGRLDATNVVQKPVVCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVP 240 (530)
T ss_pred EEEEecCCCCchhhhccCCCCEEEEccccHHHHHhhcCCHHHHHHHHHHHHhcCCCEEEeCCChHHHHHHHHHHHHhCCc
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccchhhhhcccccCcchhhHhhHHHHHHHHHHHHHhcCCCcccccCCCCCCCcHHHHHHHHhhCCCCCcEEEEec
Q 007911 256 LEVAAPLDIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHNDGQGADLPDAFVRGLSTAHLLGRAQIVYD 335 (585)
Q Consensus 256 l~~~~~~~~~~~~~~~l~L~G~hq~~Na~lAia~a~~ll~~~g~~~~~~~~~~~~~~~~e~i~~gL~~~~~pGR~E~i~~ 335 (585)
+++++..+...+..+.++|.|.||..||++|++++..++++.|... .+.......+++.+++||+++.||||||++..
T Consensus 241 l~~v~~~~~~~~~~~~l~L~G~~Q~~NaalAla~~~~~l~~~~~~~--~~~~~~~~~l~~~i~~GL~~~~wpGR~e~v~~ 318 (530)
T PLN02881 241 LQVVEPLDSYGLSGLKLGLAGEHQYLNAGLAVALCSTWLQRTGHEE--FEALLQAGTLPEQFIKGLSTASLQGRAQVVPD 318 (530)
T ss_pred EEEecccccceecccCCCCCChhHHHhHHHHHHHHHHHHhhccccc--cccccccCCCHHHHHHHHHhCCCCceEEEecc
Confidence 9987653321223467899999999999999999999887654210 00001011357899999999999999999965
Q ss_pred ccCCCCCCCccccCCCCeEEEEecCCCHHHHHHHHHHHHhhhccCCCCCCccccccccccchhHHHhhcccccccccccc
Q 007911 336 ISLVPNSSGLFENSSGELIFYLDGAHTAESMEACAKWFSSVVKGSGNSSLSSMSSTTKTNNMEEVVQRNGYIGHKMEKTK 415 (585)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~vilDgAHnp~sl~a~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (585)
... ....++++.|||||||||+||++|.+||....+.....+... +.... +.+ +....
T Consensus 319 ~~~-------~~~~~~~~~~~LDGAHNp~s~~~l~~wf~~~~~~~~~~~~~~-~~~~~-~~~-------------~~~~~ 376 (530)
T PLN02881 319 SYI-------NSEDSGDLVFYLDGAHSPESMEACARWFSSAIKGDEQSPGSG-YGPHG-GGG-------------KSEDT 376 (530)
T ss_pred ccc-------cccCCCCCeEEEECCCCHHHHHHHHHHHHHHhcccccCCccc-ccccc-ccc-------------ccccc
Confidence 100 000013468999999999999999999988654322111100 00000 000 00001
Q ss_pred ccccCccEEEEEecCCCCChhhhhHHHHHHhhhcCCCccEEEEeCCCcccccccCCCCccCCCccccchhHHHHHHHHHH
Q 007911 416 HANKISKQILLFNCMEARHPQVLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAISGKDLSWQFSLQRLWE 495 (585)
Q Consensus 416 ~~~~~~~~ilvFg~~~~Rd~~~ll~~l~~~~~~~~~~fd~~if~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~w~ 495 (585)
...+..++|+||||+++||+..||+.|.+.|.+.+..||+||||||.++|++. ++. .+..++..+|+||+.+++.|+
T Consensus 377 ~~~~~~~~ilvF~~~~dkD~~~lL~~L~~~~~~~~~~f~~aiF~~n~~~~~~~--~~~-~~~~~~~~~l~~q~~l~~~W~ 453 (530)
T PLN02881 377 ESNKISEQILLFNCMSVRDPQLLLPPLANTCASNGVPFKKALFVPNISVYNKV--GSG-LPVDDPQVDLSWQFTLQRVWE 453 (530)
T ss_pred cccCCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCCCCeEEEcCCccccCCC--ccc-CCCcchhhhHHHHHHHHHHHH
Confidence 12234579999999999999999999999998788999999999999998876 444 333344568999999999999
Q ss_pred HhhcCCCCcccccccccccccCCCccccccCCCCCCCCcccCccceecCCHHHHHHHHHhhhhcCCCCcceEEEeCchhc
Q 007911 496 RIIHGADPVLEKSSMKESTEILPPCKFLYEDAPLCSPAEECFACSAVIPSLPLTIKWLRDSVQENPSIRVQVLVTGSLHL 575 (585)
Q Consensus 496 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~si~~ai~~~~~~~~~~~~~~~~VlVTGSlhL 575 (585)
+|..+....+..+..+ +..+.+.+.....++++|||||++||+|+|+++.+++..++||||||||||
T Consensus 454 ~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v~~si~~Ai~~~r~~~~~~~~~~~~vlVTGSlhL 520 (530)
T PLN02881 454 SLIRGKAGAPADAVCE-------------ESASSGLNDGKSDENSAVFPSLPLAIKWLRDCARENPSLRFQVLVTGSLHL 520 (530)
T ss_pred Hhcccccccccccccc-------------ccccccccCCCCCCceeEecCHHHHHHHHHHHhhhCCCcceEEEEecchhh
Confidence 9964322100000000 111111122223357999999999999999998776666899999999999
Q ss_pred hHhHHhhhcC
Q 007911 576 VGDVLKLLKR 585 (585)
Q Consensus 576 VG~~l~~l~~ 585 (585)
|||||++|+|
T Consensus 521 vG~~l~~l~~ 530 (530)
T PLN02881 521 VGDVLRLLKK 530 (530)
T ss_pred hhHHHHHhcC
Confidence 9999999986
|
|
| >KOG2525 consensus Folylpolyglutamate synthase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >COG0285 FolC Folylpolyglutamate synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PLN02913 dihydrofolate synthetase | Back alignment and domain information |
|---|
| >TIGR01499 folC folylpolyglutamate synthase/dihydrofolate synthase | Back alignment and domain information |
|---|
| >PRK10846 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK00139 murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional | Back alignment and domain information |
|---|
| >PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK14022 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase; Provisional | Back alignment and domain information |
|---|
| >TIGR02068 cya_phycin_syn cyanophycin synthetase | Back alignment and domain information |
|---|
| >TIGR01085 murE UDP-N-acetylmuramyl-tripeptide synthetase | Back alignment and domain information |
|---|
| >COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | Back alignment and domain information |
|---|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed | Back alignment and domain information |
|---|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR01081 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase | Back alignment and domain information |
|---|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase | Back alignment and domain information |
|---|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
| >PRK11930 putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional | Back alignment and domain information |
|---|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR01082 murC UDP-N-acetylmuramate--alanine ligase | Back alignment and domain information |
|---|
| >PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG0773 MurC UDP-N-acetylmuramate-alanine ligase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK03815 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14016 cyanophycin synthetase; Provisional | Back alignment and domain information |
|---|
| >PF08245 Mur_ligase_M: Mur ligase middle domain; InterPro: IPR013221 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment | Back alignment and domain information |
|---|
| >PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family | Back alignment and domain information |
|---|
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components | Back alignment and domain information |
|---|
| >TIGR00750 lao LAO/AO transport system ATPase | Back alignment and domain information |
|---|
| >PRK09435 membrane ATPase/protein kinase; Provisional | Back alignment and domain information |
|---|
| >PHA02519 plasmid partition protein SopA; Reviewed | Back alignment and domain information |
|---|
| >PRK13705 plasmid-partitioning protein SopA; Provisional | Back alignment and domain information |
|---|
| >COG1072 CoaA Panthothenate kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
| >PRK13869 plasmid-partitioning protein RepA; Provisional | Back alignment and domain information |
|---|
| >COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG2403 Predicted GTPase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03172 probable selenium-dependent hydroxylase accessory protein YqeC | Back alignment and domain information |
|---|
| >COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >cd03114 ArgK-like The function of this protein family is unkown | Back alignment and domain information |
|---|
| >TIGR01007 eps_fam capsular exopolysaccharide family | Back alignment and domain information |
|---|
| >TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG | Back alignment and domain information |
|---|
| >TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed | Back alignment and domain information |
|---|
| >PHA02518 ParA-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ | Back alignment and domain information |
|---|
| >PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] | Back alignment and domain information |
|---|
| >PRK05439 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03453 partition_RepA plasmid partitioning protein RepA | Back alignment and domain information |
|---|
| >PRK13235 nifH nitrogenase reductase; Reviewed | Back alignment and domain information |
|---|
| >COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 585 | ||||
| 1o5z_A | 442 | Crystal Structure Of Folylpolyglutamate Synthase (T | 1e-34 | ||
| 1fgs_A | 428 | Folylpolyglutamate Synthetase From Lactobacillus Ca | 2e-27 | ||
| 2gca_A | 428 | Apo Form Of L. Casei Fpgs Length = 428 | 6e-27 | ||
| 1jbv_A | 428 | Fpgs-Amppcp Complex Length = 428 | 9e-27 | ||
| 2gcb_A | 428 | G51sS52T DOUBLE MUTANT OF L. CASEI FPGS Length = 42 | 2e-26 | ||
| 2gc6_A | 428 | S73a Mutant Of L. Casei Fpgs Length = 428 | 6e-26 | ||
| 2gc5_A | 428 | G51s Mutant Of L. Casei Fpgs Length = 428 | 2e-25 | ||
| 1w78_A | 422 | E.Coli Folc In Complex With Dhpp And Adp Length = 4 | 1e-24 | ||
| 3n2a_A | 437 | Crystal Structure Of Bifunctional Folylpolyglutamat | 2e-24 | ||
| 2vor_A | 487 | Crystal Structures Of Mycobacterium Tuberculosis Fo | 1e-20 | ||
| 2vos_A | 487 | Mycobacterium Tuberculosis Folylpolyglutamate Synth | 3e-12 |
| >pdb|1O5Z|A Chain A, Crystal Structure Of Folylpolyglutamate Synthase (Tm0166) From Thermotoga Maritima At 2.10 A Resolution Length = 442 | Back alignment and structure |
|
| >pdb|1FGS|A Chain A, Folylpolyglutamate Synthetase From Lactobacillus Casei Length = 428 | Back alignment and structure |
| >pdb|2GCA|A Chain A, Apo Form Of L. Casei Fpgs Length = 428 | Back alignment and structure |
| >pdb|1JBV|A Chain A, Fpgs-Amppcp Complex Length = 428 | Back alignment and structure |
| >pdb|2GCB|A Chain A, G51sS52T DOUBLE MUTANT OF L. CASEI FPGS Length = 428 | Back alignment and structure |
| >pdb|2GC6|A Chain A, S73a Mutant Of L. Casei Fpgs Length = 428 | Back alignment and structure |
| >pdb|2GC5|A Chain A, G51s Mutant Of L. Casei Fpgs Length = 428 | Back alignment and structure |
| >pdb|1W78|A Chain A, E.Coli Folc In Complex With Dhpp And Adp Length = 422 | Back alignment and structure |
| >pdb|3N2A|A Chain A, Crystal Structure Of Bifunctional Folylpolyglutamate SynthaseDIHYDROFOLATE SYNTHASE FROM YERSINIA PESTIS CO92 Length = 437 | Back alignment and structure |
| >pdb|2VOR|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis Folylpolyglutamate Synthase Complexed With Adp And Amppcp Length = 487 | Back alignment and structure |
| >pdb|2VOS|A Chain A, Mycobacterium Tuberculosis Folylpolyglutamate Synthase Complexed With Adp Length = 487 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A Length = 428 | Back alignment and structure |
|---|
Score = 299 bits (768), Expect = 3e-96
Identities = 95/366 (25%), Positives = 151/366 (41%), Gaps = 62/366 (16%)
Query: 27 SYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGL-EDRIAELKVIHVSGTK 85
+Y + + S K G +R+ L LG + + + IHV+GT
Sbjct: 2 NYTETVAYIHSFPRLAKTG----------DHRRILTLLHALGNPQQQ---GRYIHVTGTN 48
Query: 86 GKGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFRINGLDITEDKFLFYFWECWHLLRE 145
GKGS +L G GL+TSP ++ ER I+ I + + L
Sbjct: 49 GKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALER 108
Query: 146 NVTEDLPMPP-LFQFLTVLAFKIFVCEQVDVAIIEVGLGGEKDSTNVIKEPVVCGVTSLG 204
+ F+F+T LA+ F QVDVA+IEVG+GG+ DSTNVI PVV +T +
Sbjct: 109 LQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIGGDTDSTNVIT-PVVSVLTEVA 167
Query: 205 MDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVPLEVAAP--- 261
+DH +LLG+T+ IA HKAGI K IP T + +A +V+ +
Sbjct: 168 LDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFS 227
Query: 262 ------------LDIE----KLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSH 305
E ++ LE+ L GD+Q N +A+ ++ + ++T ++
Sbjct: 228 VPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTE--WPLT- 284
Query: 306 NDGQGADLPDAFVRGLSTAHLLGRAQIVYDISLVPNSSGLFENSSGELIFYLDGAHTAES 365
P +GL+ +H R + + S + +DGAH +
Sbjct: 285 --------PQNIRQGLAASHWPARLEKI----------------SDTPLIVIDGAHNPDG 320
Query: 366 MEACAK 371
+
Sbjct: 321 INGLIT 326
|
| >1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2 Length = 442 | Back alignment and structure |
|---|
| >2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A* Length = 487 | Back alignment and structure |
|---|
| >3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A* Length = 437 | Back alignment and structure |
|---|
| >1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A* Length = 422 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A* Length = 535 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
| >1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 498 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| 3nrs_A | 437 | Dihydrofolate:folylpolyglutamate synthetase; struc | 100.0 | |
| 2vos_A | 487 | Folylpolyglutamate synthase protein FOLC; ligase, | 100.0 | |
| 1jbw_A | 428 | Folylpolyglutamate synthase; FPGS folate AMPPCP te | 100.0 | |
| 1o5z_A | 442 | Folylpolyglutamate synthase/dihydrofolate synthas; | 100.0 | |
| 1w78_A | 422 | FOLC bifunctional protein; DHFS, dihydrofolate syn | 100.0 | |
| 1e8c_A | 498 | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diami | 100.0 | |
| 2wtz_A | 535 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-di | 100.0 | |
| 1gg4_A | 452 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamino | 100.0 | |
| 2am1_A | 454 | SP protein, UDP-N-acetylmuramoylalanine-D-glutamyl | 100.0 | |
| 1p3d_A | 475 | UDP-N-acetylmuramate--alanine ligase; alpha/beta p | 100.0 | |
| 2f00_A | 491 | UDP-N-acetylmuramate--L-alanine ligase; amide bond | 100.0 | |
| 1j6u_A | 469 | UDP-N-acetylmuramate-alanine ligase MURC; structur | 100.0 | |
| 2x5o_A | 439 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; A | 100.0 | |
| 4hv4_A | 494 | UDP-N-acetylmuramate--L-alanine ligase; MURC, yers | 100.0 | |
| 3hn7_A | 524 | UDP-N-acetylmuramate-L-alanine ligase; ATP-binding | 100.0 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 100.0 | |
| 3eag_A | 326 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME | 99.95 | |
| 3mvn_A | 163 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M | 99.37 | |
| 2obn_A | 349 | Hypothetical protein; structural genomics, joint c | 93.19 | |
| 3fwy_A | 314 | Light-independent protochlorophyllide reductase I | 91.8 | |
| 1byi_A | 224 | Dethiobiotin synthase; biotin synthesis, cyclo-lig | 90.71 | |
| 3dm5_A | 443 | SRP54, signal recognition 54 kDa protein; protein- | 89.36 | |
| 3bfv_A | 271 | CAPA1, CAPB2, membrane protein CAPA1, protein tyro | 89.32 | |
| 3of5_A | 228 | Dethiobiotin synthetase; structural genomics, cent | 88.58 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 88.08 | |
| 3kl4_A | 433 | SRP54, signal recognition 54 kDa protein; signal r | 88.0 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 87.32 | |
| 3cio_A | 299 | ETK, tyrosine-protein kinase ETK; WZC, escherichia | 87.32 | |
| 1xjc_A | 169 | MOBB protein homolog; structural genomics, midwest | 86.76 | |
| 1g3q_A | 237 | MIND ATPase, cell division inhibitor; alpha-beta-a | 86.37 | |
| 3la6_A | 286 | Tyrosine-protein kinase WZC; P-loop protein, nucle | 85.89 | |
| 3ez2_A | 398 | Plasmid partition protein A; type IA, DNA binding, | 85.52 | |
| 1wcv_1 | 257 | SOJ, segregation protein; ATPase, bacterial, chrom | 84.29 | |
| 2oze_A | 298 | ORF delta'; para, walker type atpases, DNA segrega | 84.11 | |
| 1hyq_A | 263 | MIND, cell division inhibitor (MIND-1); MINC, FTSZ | 83.38 | |
| 3q9l_A | 260 | Septum site-determining protein MIND; ATPase, bact | 82.74 | |
| 3ea0_A | 245 | ATPase, para family; alpha-beta-alpha sandwich, st | 82.34 | |
| 2ph1_A | 262 | Nucleotide-binding protein; alpha-beta protein, st | 82.07 | |
| 3qxc_A | 242 | Dethiobiotin synthetase; DTBS, structural genomics | 81.76 | |
| 2xj4_A | 286 | MIPZ; replication, cell division, ATPase, WACA; 1. | 81.58 | |
| 3k9g_A | 267 | PF-32 protein; ssgcid, SBRI, decode biostructures, | 80.92 |
| >3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-72 Score=611.54 Aligned_cols=401 Identities=26% Similarity=0.331 Sum_probs=310.4
Q ss_pred CcCcHHHHHHHHHhhhhhhhcCCCccccccCCChHHHHHHHHHhCCCCcccCccEEEEecCCCCchHHHHHHHHHHHCCC
Q 007911 24 LSSSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIAELKVIHVSGTKGKGSTCTFCEAILRECGF 103 (585)
Q Consensus 24 ~~~~y~~a~~~L~~l~~~~~~~~~~~~~~~~~~l~~~~~~L~~Lg~~~p~~~l~vIhVTGTnGKgST~aml~sIL~~~G~ 103 (585)
...+|+++++||.++..+ +.+++|+||+++|++||+ |+.++++|||||||||||||+||++||+++|+
T Consensus 12 ~~~~~~~~l~~l~~~~~~----------~~~~gL~r~~~ll~~lg~--p~~~~~vI~VtGTNGKgSt~~~l~~iL~~~G~ 79 (437)
T 3nrs_A 12 ATSPLAAWLCYLEHLHSQ----------PIELGLERVKQVAERLDL--LKPAPKIFTVAGTNGKGTTCCTLEAILLAAGL 79 (437)
T ss_dssp TTSCHHHHHHHHHTC-----------------CCHHHHHHHHHTTC--SCSSSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHhcCCC----------CCCCCHHHHHHHHHHcCC--ccccCCEEEEECCcChHHHHHHHHHHHHHCCC
Confidence 346899999999998754 233789999999999994 78899999999999999999999999999999
Q ss_pred CeEEEcCCccccccceEEECCEecCHHHHHHHHHHHHHhhhhhccCCCCCCCHHHHHHHHHHHHhhhCCCcEEEEeecCC
Q 007911 104 RTGLFTSPHLIDVRERFRINGLDITEDKFLFYFWECWHLLRENVTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVGLG 183 (585)
Q Consensus 104 kvGl~tSPhL~~~rERI~inG~~is~~~f~~~f~~v~~~l~~~~~~~~~~ps~Fe~lTllA~~~F~~~~vd~aVlEvG~g 183 (585)
|||+||||||.+|||||+|||++|+++.|.++|.+|..... + ..||+||+.|++||.+|.++++|++|||||+|
T Consensus 80 ~vg~~tSphl~~~neri~i~g~~i~~~~~~~~~~~v~~~~~-----~-~~~T~fe~~t~~a~~~f~~~~~d~~VlEvGlg 153 (437)
T 3nrs_A 80 RVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRG-----D-ISLTYFEFGTLSALQLFKQAKLDVVILEVGLG 153 (437)
T ss_dssp CEEEECCCCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHT-----T-CCCCHHHHHHHHHHHHHHHTCCSEEEEECSSS
T ss_pred cEEEECCCCcCCcceEEEECCEECCHHHHHHHHHHHHHhhc-----C-CCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999877655331 1 35899999999999999999999999999999
Q ss_pred CCccccccccCCcEEEEcCCCcccccccCCCHHHHHHHHhcccCCCCcEEeeCCchHHHHHHHHHHHhcCccEEEecc-c
Q 007911 184 GEKDSTNVIKEPVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVPLEVAAP-L 262 (585)
Q Consensus 184 Gr~D~Tnvi~~P~vavITNIg~DHld~lG~Tle~IA~~KagI~k~g~~aV~~~qd~~~~~vl~~~a~~~~~~l~~~~~-~ 262 (585)
||+|+||++ +|+++|||||+.||+|+||+|+|+||++|++||++++++|++.+++. .++.+.|++.+++++.++. +
T Consensus 154 grld~tnii-~p~vaVITnI~~DHld~lG~t~e~ia~~Ka~I~~~~~~~V~~~d~~~--~~~~~~a~~~~~~~~~~g~~~ 230 (437)
T 3nrs_A 154 GRLDATNIV-DSDVAAITSIALDHTDWLGYDRESIGREKAGVFRGGKPAVVGEPDMP--QSIADVAAELGAQLYRRDVAW 230 (437)
T ss_dssp STTSGGGGS-CCSEEEECCCCCCBCCCTTCSHHHHHHHHGGGCCTTSEEEECCSSCC--HHHHHHHHHHTCEEEEBTTTE
T ss_pred Ccccccccc-CCCEEEEcCccHHHHHHhCCcHHHHHHHHHhhccCCCeEEECCccHH--HHHHHHHHHcCCcEEEecccc
Confidence 999999999 69999999999999999999999999999999999999999987653 4677788888888776642 1
Q ss_pred ch---------------h-h-------hhcccccCcchhhHhhHHHHHHHHHHHHHhcCCCcccccCCCCCCCcHHHHHH
Q 007911 263 DI---------------E-K-------LKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHNDGQGADLPDAFVR 319 (585)
Q Consensus 263 ~~---------------~-~-------~~~~~l~L~G~hq~~Na~lAia~a~~ll~~~g~~~~~~~~~~~~~~~~e~i~~ 319 (585)
+. . . ...+.++++| ||..|++.|++++..+ ..| ..++.|.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-~~~~Na~~Alaa~~~~--~lg-------------i~~~~i~~ 294 (437)
T 3nrs_A 231 KFSQQEPFDQQEPVDQQINGWHWQCGERQLTGLPVPN-VPLANAATALAVLHYS--ELP-------------LSDEAIRQ 294 (437)
T ss_dssp EEEC--------------CCEEEEETTEEEEEECCCS-SCHHHHHHHHHHHHHH--TCC-------------CCHHHHHH
T ss_pred eeeecccccccccccccCceEEEecCCcceeccCCcc-hhHHHHHHHHHHHHHh--CCC-------------CCHHHHHH
Confidence 00 0 0 0124566674 4555555555554443 113 23688999
Q ss_pred HHhhCCCCCcEEEEecccCCCCCCCccccCCCCeEEEEecCCCHHHHHHHHHHHHhhhccCCCCCCccccccccccchhH
Q 007911 320 GLSTAHLLGRAQIVYDISLVPNSSGLFENSSGELIFYLDGAHTAESMEACAKWFSSVVKGSGNSSLSSMSSTTKTNNMEE 399 (585)
Q Consensus 320 gL~~~~~pGR~E~i~~~~~~~~~~~~~~~~~~~~~vilDgAHnp~sl~a~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (585)
||+++.||||||++... +.+|+||||||+|+++++++++...+..
T Consensus 295 gL~~~~~pGR~e~v~~~----------------~~vi~D~AHNp~a~~all~~l~~~~~~~------------------- 339 (437)
T 3nrs_A 295 GLQAASLPGRFQVVSEQ----------------PLLILDVAHNPHAARYLVNRLAQVINPV------------------- 339 (437)
T ss_dssp HHHHCCCTTSSEEEETT----------------TEEEECCCCSHHHHHHHHHHHHHTC----------------------
T ss_pred HHHhCCCCCceEEEecC----------------CeEEEECCCCHHHHHHHHHHHHhhcchh-------------------
Confidence 99999999999999754 5799999999999999999997211000
Q ss_pred HHhhccccccccccccccccCccEEEEEecCCCCChhhhhHHHHHHhhhcCCCccEEEEeCCCcccccccCCCCccCCCc
Q 007911 400 VVQRNGYIGHKMEKTKHANKISKQILLFNCMEARHPQVLLPRLVSTCASSGTHFSKALFVPSVSTYSKVTSGSSFIPLAI 479 (585)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~ilvFg~~~~Rd~~~ll~~l~~~~~~~~~~fd~~if~~~~~~~~~~~~~~~~~~~~~ 479 (585)
...+.+++++||||++|||...+++.|.+ .++++++++.. +.+. .
T Consensus 340 ----------------~~~~~~r~i~V~G~~~dkd~~~~~~~l~~-------~~~~v~~~~~~--------~~r~----~ 384 (437)
T 3nrs_A 340 ----------------NASKQGKVRAVVGMLSDKDIAGTLACLSE-------RVDEWYCAPLE--------GPRG----A 384 (437)
T ss_dssp ---------------------CCEEEEECCBTTBCHHHHHHHHTT-------TCCEEEECCCS--------STTB----C
T ss_pred ----------------hhcCCCCEEEEEeCCCCCCHHHHHHHHHh-------cCCEEEEeCCC--------CCCC----C
Confidence 00123578999999999999887766632 46888887654 1111 1
Q ss_pred cccchhHHHHHHHHHHHhhcCCCCcccccccccccccCCCccccccCCCCCCCCcccCccceecCCHHHHHHHHHhhhhc
Q 007911 480 SGKDLSWQFSLQRLWERIIHGADPVLEKSSMKESTEILPPCKFLYEDAPLCSPAEECFACSAVIPSLPLTIKWLRDSVQE 559 (585)
Q Consensus 480 ~~~~~~~q~~~~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~si~~ai~~~~~~~~~ 559 (585)
+. +++..... .. .++++.++|++++.+.+++
T Consensus 385 ~~-------------~~l~~~~~-----------------------------------~~-~~~~d~~~Ai~~a~~~a~~ 415 (437)
T 3nrs_A 385 SA-------------GQLAEHLV-----------------------------------SA-RQFSDVETAWRQAMQDADT 415 (437)
T ss_dssp CH-------------HHHHTTCS-----------------------------------SC-EECSSHHHHHHHHHHHCCT
T ss_pred CH-------------HHHHHHHh-----------------------------------hC-CCcCCHHHHHHHHHHhcCC
Confidence 11 11211000 01 4678999999999887643
Q ss_pred CCCCcceEEEeCchhchHhHHhhhc
Q 007911 560 NPSIRVQVLVTGSLHLVGDVLKLLK 584 (585)
Q Consensus 560 ~~~~~~~VlVTGSlhLVG~~l~~l~ 584 (585)
.--|||+||||+||++++.|.
T Consensus 416 ----~D~VLv~GS~~~v~~~~~~~~ 436 (437)
T 3nrs_A 416 ----QDVVIVCGSFHTVAHVMAALH 436 (437)
T ss_dssp ----TCEEEEESSHHHHHHHHHHTT
T ss_pred ----CCeEEEEehHHHHHHHHHHhc
Confidence 125999999999999998874
|
| >2vos_A Folylpolyglutamate synthase protein FOLC; ligase, peptidoglycan synthesis, cell division; HET: ADP; 2.0A {Mycobacterium tuberculosis} PDB: 2vor_A* | Back alignment and structure |
|---|
| >1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A | Back alignment and structure |
|---|
| >1o5z_A Folylpolyglutamate synthase/dihydrofolate synthas; TM0166, structural genomics, JC protein structure initiative; 2.10A {Thermotoga maritima} SCOP: c.59.1.2 c.72.2.2 | Back alignment and structure |
|---|
| >1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A* | Back alignment and structure |
|---|
| >1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 | Back alignment and structure |
|---|
| >2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A* | Back alignment and structure |
|---|
| >1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 | Back alignment and structure |
|---|
| >2am1_A SP protein, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-A alanine ligase, MURF protein; HET: 1LG; 2.50A {Streptococcus pneumoniae} PDB: 2am2_A* | Back alignment and structure |
|---|
| >1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A* | Back alignment and structure |
|---|
| >2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 | Back alignment and structure |
|---|
| >2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* | Back alignment and structure |
|---|
| >4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A | Back alignment and structure |
|---|
| >3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4} | Back alignment and structure |
|---|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
| >3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi} | Back alignment and structure |
|---|
| >2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis} | Back alignment and structure |
|---|
| >3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} | Back alignment and structure |
|---|
| >1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A | Back alignment and structure |
|---|
| >3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A* | Back alignment and structure |
|---|
| >3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp} | Back alignment and structure |
|---|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
| >3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A | Back alignment and structure |
|---|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
| >3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 | Back alignment and structure |
|---|
| >1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A* | Back alignment and structure |
|---|
| >3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli} | Back alignment and structure |
|---|
| >3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A | Back alignment and structure |
|---|
| >1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A* | Back alignment and structure |
|---|
| >2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10 | Back alignment and structure |
|---|
| >3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A* | Back alignment and structure |
|---|
| >3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum} | Back alignment and structure |
|---|
| >2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A* | Back alignment and structure |
|---|
| >3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A | Back alignment and structure |
|---|
| >2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A | Back alignment and structure |
|---|
| >3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 585 | ||||
| d2gc6a2 | 296 | c.72.2.2 (A:1-296) Folylpolyglutamate synthetase { | 8e-31 | |
| d1o5za2 | 296 | c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase | 5e-30 | |
| d1e8ca3 | 234 | c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptid | 3e-08 | |
| d1j6ua3 | 207 | c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine l | 2e-06 | |
| d1gg4a4 | 214 | c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl | 3e-05 | |
| d2jfga3 | 204 | c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine | 7e-05 | |
| d1p3da3 | 215 | c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine | 0.004 |
| >d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]} Length = 296 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: MurD-like peptide ligases, catalytic domain family: Folylpolyglutamate synthetase domain: Folylpolyglutamate synthetase species: Lactobacillus casei [TaxId: 1582]
Score = 119 bits (299), Expect = 8e-31
Identities = 66/318 (20%), Positives = 117/318 (36%), Gaps = 42/318 (13%)
Query: 27 SYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIAELKVIHVSGTKG 86
+Y + + S K G +R+ L LG + + + IHV+GT G
Sbjct: 2 NYTETVAYIHSFPRLAKTG----------DHRRILTLLHALGNPQQ--QGRYIHVTGTNG 49
Query: 87 KGSTCTFCEAILRECGFRTGLFTSPHLIDVRERFRINGLDITEDKFLFYFWECWHLLREN 146
KGS +L G GL+T+P ++ ER I+ I + + L
Sbjct: 50 KGSAANAIAHVLEASGLTVGLYTAPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERL 109
Query: 147 VTEDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVGLGGEKDSTNVIKEPVVCGVTSLGMD 206
+ + ++ + G + + PVV +T + +D
Sbjct: 110 QQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTEVALD 169
Query: 207 HMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVPLEVAAPL---- 262
H +LLG+T+ IA HKAGI K IP T + +A +V+ +
Sbjct: 170 HQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVP 229
Query: 263 ---------------DIEKLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHND 307
++ LE+ L GD+Q N +A+ ++ + ++T W ++
Sbjct: 230 KAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTE-W-PLT--- 284
Query: 308 GQGADLPDAFVRGLSTAH 325
P +GL+ +H
Sbjct: 285 ------PQNIRQGLAASH 296
|
| >d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]} Length = 296 | Back information, alignment and structure |
|---|
| >d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]} Length = 234 | Back information, alignment and structure |
|---|
| >d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} Length = 207 | Back information, alignment and structure |
|---|
| >d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]} Length = 214 | Back information, alignment and structure |
|---|
| >d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Length = 204 | Back information, alignment and structure |
|---|
| >d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Length = 215 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 585 | |||
| d2gc6a2 | 296 | Folylpolyglutamate synthetase {Lactobacillus casei | 100.0 | |
| d1o5za2 | 296 | Folylpolyglutamate synthetase {Thermotoga maritima | 100.0 | |
| d1e8ca3 | 234 | UDP-N-acetylmuramyl tripeptide synthetase MurE {Es | 99.97 | |
| d2jfga3 | 204 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 99.95 | |
| d1p3da3 | 215 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 99.94 | |
| d1gg4a4 | 214 | UDP-murNac-tripeptide D-alanyl-D-alanine-adding en | 99.93 | |
| d1j6ua3 | 207 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 99.93 | |
| d2gc6a1 | 129 | Folylpolyglutamate synthetase, C-terminal domain { | 99.8 | |
| d1o5za1 | 137 | Folylpolyglutamate synthetase, C-terminal domain { | 99.8 | |
| d1e8ca2 | 160 | UDP-N-acetylmuramyl tripeptide synthetase MurE {Es | 99.5 | |
| d1j6ua2 | 151 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 98.86 | |
| d1gg4a1 | 135 | UDP-murNac-tripeptide D-alanyl-D-alanine-adding en | 98.59 | |
| d1p3da2 | 152 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 98.47 | |
| d2jfga2 | 140 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.83 | |
| d2p67a1 | 327 | LAO/AO transport system kinase ArgK {Escherichia c | 95.55 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 94.57 | |
| d2qm8a1 | 323 | Metallochaperone MeaB {Methylobacterium extorquens | 94.19 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 88.89 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 88.44 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 87.02 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 86.45 | |
| d2afhe1 | 289 | Nitrogenase iron protein {Azotobacter vinelandii [ | 82.73 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 81.63 | |
| d1j8yf2 | 211 | GTPase domain of the signal sequence recognition p | 80.4 |
| >d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: MurD-like peptide ligases, catalytic domain family: Folylpolyglutamate synthetase domain: Folylpolyglutamate synthetase species: Lactobacillus casei [TaxId: 1582]
Probab=100.00 E-value=5.6e-54 Score=440.89 Aligned_cols=274 Identities=31% Similarity=0.466 Sum_probs=239.3
Q ss_pred CcHHHHHHHHHhhhhhhhcCCCccccccCCChHHHHHHHHHhCCCCcccCccEEEEecCCCCchHHHHHHHHHHHCCCCe
Q 007911 26 SSYENAMQALSSLITRQKRGEQSHIAGRYGKLQRMSMYLKILGLEDRIAELKVIHVSGTKGKGSTCTFCEAILRECGFRT 105 (585)
Q Consensus 26 ~~y~~a~~~L~~l~~~~~~~~~~~~~~~~~~l~~~~~~L~~Lg~~~p~~~l~vIhVTGTnGKgST~aml~sIL~~~G~kv 105 (585)
|+|+|+++||++++++. ..++|+||+++|++|| +|++++++|||||||||||||+|+++||+++|++|
T Consensus 1 m~~~e~~~~l~~~~~~~----------~~~~l~r~~~~l~~lg--~P~~~lkvI~VTGTNGKtST~~~i~~IL~~~G~kv 68 (296)
T d2gc6a2 1 MNYTETVAYIHSFPRLA----------KTGDHRRILTLLHALG--NPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTV 68 (296)
T ss_dssp CCHHHHHHHHHTCCCCC-------------CCHHHHHHHHHTT--CGGGSSCEEEEECSSSHHHHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHhcCcCC----------CCCCHHHHHHHHHHcC--CchhhCCEEEEeccCcHHHHHHHHHHHHHhcCCce
Confidence 79999999999987642 2378999999999999 59999999999999999999999999999999999
Q ss_pred EEEcCCccccccceEEECCEecCHHHHHHHHHHHHHhhhhhcc-CCCCCCCHHHHHHHHHHHHhhhCCCcEEEEeecCCC
Q 007911 106 GLFTSPHLIDVRERFRINGLDITEDKFLFYFWECWHLLRENVT-EDLPMPPLFQFLTVLAFKIFVCEQVDVAIIEVGLGG 184 (585)
Q Consensus 106 Gl~tSPhL~~~rERI~inG~~is~~~f~~~f~~v~~~l~~~~~-~~~~~ps~Fe~lTllA~~~F~~~~vd~aVlEvG~gG 184 (585)
|+|||||+.+++||+++||.+|+++.|..++.+++..+..... .....+++|++++++++.+|.+..+|++|+|+|+||
T Consensus 69 G~~tSP~~~~~~e~~~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~d~~i~e~g~g~ 148 (296)
T d2gc6a2 69 GLYTAPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGG 148 (296)
T ss_dssp EEECSSCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred eeeecccccchhhhhcccccCCcHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHHHHHhcchhhhhhhHHHH
Confidence 9999999999999999999999999999988888776654321 112357999999999999999999999999999999
Q ss_pred CccccccccCCcEEEEcCCCcccccccCCCHHHHHHHHhcccCCCCcEEeeCCchHHHHHHHHHHHhcCccEEEecc-cc
Q 007911 185 EKDSTNVIKEPVVCGVTSLGMDHMELLGNTLNDIAFHKAGIFKPQIPAFTVPQLSEAMSVLQDRALELMVPLEVAAP-LD 263 (585)
Q Consensus 185 r~D~Tnvi~~P~vavITNIg~DHld~lG~Tle~IA~~KagI~k~g~~aV~~~qd~~~~~vl~~~a~~~~~~l~~~~~-~~ 263 (585)
++|+||++ +|++++||||+.||+++||+|+++||++|++|||++.++|+..+++++.+++++.+.+.++.++.++. +.
T Consensus 149 ~~d~~~~~-~~~~~viTni~~dH~~~lg~tle~Ia~~K~~i~k~~~~~v~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~ 227 (296)
T d2gc6a2 149 DTDSTNVI-TPVVSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFS 227 (296)
T ss_dssp TTSTTCSC-CCSEEEECCCCSTTHHHHCSSHHHHHHHHHTTCCTTCCEEECCCCHHHHHHHHHHHHHHTCCEEEBTTTEE
T ss_pred hhhhhhcc-cceeecccccchHHHHhhhhHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHhhCCcccccCccee
Confidence 99999998 79999999999999999999999999999999999999999999999999999999999888877642 11
Q ss_pred --------------hh----hhhcccccCcchhhHhhHHHHHHHHHHHHHhcCCCcccccCCCCCCCc-HHHHHHHHhhC
Q 007911 264 --------------IE----KLKRLELSLSGDHQLVNAGLAVSLSECWLRRTGNWEKVSHNDGQGADL-PDAFVRGLSTA 324 (585)
Q Consensus 264 --------------~~----~~~~~~l~L~G~hq~~Na~lAia~a~~ll~~~g~~~~~~~~~~~~~~~-~e~i~~gL~~~ 324 (585)
+. .+..+.++|+|.||++||++|++++..+....+. ++ .+.|++||+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~G~hn~~Na~~Aia~~~~l~~~~~~------------~i~~e~I~~GL~~~ 295 (296)
T d2gc6a2 228 VPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEW------------PLTPQNIRQGLAAS 295 (296)
T ss_dssp EEEEEECSSSEEEEEEETTEEEEEEEESCCSHHHHHHHHHHHHHHHHHHHHTTC------------CCCHHHHHHHHHHC
T ss_pred eeccccccCCceEEEEcCCCccCcCCCCCCcHHHHHHHHHHHHHHHHHHhhcCC------------CCCHHHHHHHHHhh
Confidence 00 1124788999999999999999999998655441 23 68999999875
|
| >d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
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| >d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1e8ca2 c.59.1.1 (A:338-497) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1p3da2 c.59.1.1 (A:322-473) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
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| >d2jfga2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
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| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
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| >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
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| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
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| >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} | Back information, alignment and structure |
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