Citrus Sinensis ID: 007947

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580---
MSAIVVSLTTCLSWSSSPSSSSLLFSKLGLGSAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVSLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
ccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEEEEcccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEcHHHHHHcccccEEEccccccccccEEEEEEccccccccccEEEEcccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccEEEcccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHHHHHHHHccc
ccEEEEEEHHEEcccccccHHHHHHHHcccccccccEEEEccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEcccHHHccccEEEEEEEccccccccccccccHHHHHHHHHHccHHHHHHHccccccccccEEEEEcccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHcHHHHccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHccHHHHHHHHccccccEEEEEEEEcccccccccEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccccccEEEcccccEEEcccccccHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccEEEccccHHHHHHHccccccEEcccccccHHHHHHHHHHccHccccccEEEEcccccccccccccccccHHHHHHHHHHHcc
MSAIVVSLTTclswssspssssllfsklglgsAAAFrrycapsppppllfcrgklRMAHSIARATlgltkpaqidplkisfaakevdvvEWKGDILAVgvtekdmgkddnskFQNSILKKLDAQLGgllseasseedftgkagqstvirlpgigskrvgliglgqsasragdfrSLGESVAAAAKAAQASNVAVVLAssdglsdeskLTAASAVASgtvlgtfednryrseskkpvslksvdiiglgtgpeleKKLKYAEHVSSAVIFGrelvnspanvltPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAasanlphfihlcykppggsaKIKLALVGkgltfdsggyniktgpgclienmkydMGGAAAVLGAAKaigqikppgvEVHFIVAACENmisgtgmrpgdiitaangktievnntdaeGRLTLADALIYACNQGVDKVIDLATLTGACVvalgpsvagaftpsddlANEVMAASQVsgekiwrmplEESYWEMMKSGVADMVntggrqggAITAALFLKQYVDEKVQWMHIDiagpvwsekmrsatGFGISTMVEWVLKNSC
MSAIVVSLTtclswssspssssLLFSKLGLGSAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARAtlgltkpaqiDPLKISFAakevdvveWKGDILAVgvtekdmgkddNSKFQNSILKKLDAQLGGLLSEASseedftgkagqstvirlpgigskrVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAasavasgtvlgtfednryrseskkpvslksvdiigLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAAsqvsgekiwRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
MSAIVVslttclswssspssssllfsklglgsAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSLGESvaaaakaaqasnvavvLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVSLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMggaaavlgaakaigQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
***IVVSLTTCLSW*********LFSKLGLGSAAAFR***********LFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVT********************************************TVIRLPGIGSKRVGLIGLG****************************AVV***********************VL******************KSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMK**********************GVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVL****
******SLTTCLSWSSSPSSSSLLFSKLGLG********************************ATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDN***************DIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNS*
***********************LFSKLGLGSAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLS***********AGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRS***************NVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRY********SLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
*SAIVVSLTTCLSWSSSPSSSSLLFSKLGLGSAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVSLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSAIVVSLTTCLSWSSSPSSSSLLFSKLGLGSAAAFRRYCAPSPPPPLLFCRGKLRMAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVSLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query583 2.2.26 [Sep-21-2011]
Q944P7583 Leucine aminopeptidase 3, yes no 0.900 0.900 0.798 0.0
P30184520 Leucine aminopeptidase 1 no no 0.888 0.996 0.779 0.0
Q6K669598 Leucine aminopeptidase 2, yes no 0.905 0.882 0.771 0.0
Q8RX72581 Leucine aminopeptidase 2, no no 0.912 0.915 0.760 0.0
Q42876569 Leucine aminopeptidase 2, N/A no 0.912 0.934 0.766 0.0
P31427573 Leucine aminopeptidase, c N/A no 0.910 0.926 0.705 0.0
Q10712571 Leucine aminopeptidase 1, N/A no 0.914 0.933 0.692 0.0
Q2QSB9542 Putative leucine aminopep yes no 0.876 0.942 0.670 0.0
B8HTK3493 Probable cytosol aminopep yes no 0.806 0.953 0.482 1e-120
B0CCF6492 Probable cytosol aminopep yes no 0.825 0.977 0.483 1e-117
>sp|Q944P7|AMPL3_ARATH Leucine aminopeptidase 3, chloroplastic OS=Arabidopsis thaliana GN=At4g30920 PE=2 SV=2 Back     alignment and function desciption
 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/526 (79%), Positives = 477/526 (90%), Gaps = 1/526 (0%)

Query: 57  MAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNS 116
           MAH+I+ ATLGLT+   +D  KISF+ KE+DV EWKGDILAVGVTEKDM KD NSKF+N 
Sbjct: 57  MAHTISHATLGLTQANSVDHPKISFSGKEIDVTEWKGDILAVGVTEKDMAKDVNSKFENP 116

Query: 117 ILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSL 176
           ILKKLDA LGGLL++ SSEEDF+GK GQSTV+RLPG+GSKRVGLIGLG+SAS    F+SL
Sbjct: 117 ILKKLDAHLGGLLADVSSEEDFSGKPGQSTVLRLPGLGSKRVGLIGLGKSASTPSAFQSL 176

Query: 177 GESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPV 236
           GE+VAAAAKA+QAS+VAVVLASS+ +S+ESKL +ASA+ASGTVLG FED+RY+SESKKP 
Sbjct: 177 GEAVAAAAKASQASSVAVVLASSESVSNESKLCSASAIASGTVLGLFEDSRYKSESKKP- 235

Query: 237 SLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMY 296
           SLKSVDIIG G+GPELEKKLKYAEHVS  VIFG+ELVNSPANVLTPAVLAEEA  +ASMY
Sbjct: 236 SLKSVDIIGFGSGPELEKKLKYAEHVSYGVIFGKELVNSPANVLTPAVLAEEALNLASMY 295

Query: 297 SDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTF 356
           SDV++A IL+ E+CKELKMGSYL VAAASAN PHFIHL YKP  G  K KLALVGKGLTF
Sbjct: 296 SDVMTANILNEEQCKELKMGSYLAVAAASANPPHFIHLIYKPSSGPVKTKLALVGKGLTF 355

Query: 357 DSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG 416
           DSGGYNIKTGPGCLIE MK+DMGG+AAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG
Sbjct: 356 DSGGYNIKTGPGCLIELMKFDMGGSAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG 415

Query: 417 MRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPS 476
           MRPGD++TA+NGKTIEVNNTDAEGRLTLADAL+YACNQGVDKV+DLATLTGAC++ALG S
Sbjct: 416 MRPGDVLTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKVVDLATLTGACIIALGTS 475

Query: 477 VAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAA 536
           +AG +TPSD LA EV+AAS+ SGEK+WRMP+EESYWEMMKSGVADMVNTGGR GG+ITAA
Sbjct: 476 MAGIYTPSDKLAKEVIAASERSGEKLWRMPMEESYWEMMKSGVADMVNTGGRAGGSITAA 535

Query: 537 LFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNS 582
           LFLKQ+V E V+WMHID+AGPVW+EK ++ATGFG++T+VEWV  +S
Sbjct: 536 LFLKQFVSEDVEWMHIDMAGPVWNEKKKAATGFGVATLVEWVQNHS 581
Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 5
>sp|P30184|AMPL1_ARATH Leucine aminopeptidase 1 OS=Arabidopsis thaliana GN=PM25 PE=1 SV=1 Back     alignment and function description
>sp|Q6K669|AMPL2_ORYSJ Leucine aminopeptidase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0794700 PE=2 SV=1 Back     alignment and function description
>sp|Q8RX72|AMPL2_ARATH Leucine aminopeptidase 2, chloroplastic OS=Arabidopsis thaliana GN=At4g30910 PE=2 SV=1 Back     alignment and function description
>sp|Q42876|AMPL2_SOLLC Leucine aminopeptidase 2, chloroplastic OS=Solanum lycopersicum GN=LAPA2 PE=2 SV=1 Back     alignment and function description
>sp|P31427|AMPL_SOLTU Leucine aminopeptidase, chloroplastic OS=Solanum tuberosum GN=LAP PE=2 SV=2 Back     alignment and function description
>sp|Q10712|AMPL1_SOLLC Leucine aminopeptidase 1, chloroplastic OS=Solanum lycopersicum GN=LAPA1 PE=2 SV=1 Back     alignment and function description
>sp|Q2QSB9|AMPL1_ORYSJ Putative leucine aminopeptidase 1 OS=Oryza sativa subsp. japonica GN=Os12g0434400 PE=3 SV=2 Back     alignment and function description
>sp|B8HTK3|AMPA_CYAP4 Probable cytosol aminopeptidase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pepA PE=3 SV=1 Back     alignment and function description
>sp|B0CCF6|AMPA_ACAM1 Probable cytosol aminopeptidase OS=Acaryochloris marina (strain MBIC 11017) GN=pepA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query583
255576991587 leucine aminopeptidase, putative [Ricinu 0.900 0.894 0.830 0.0
224143950526 predicted protein [Populus trichocarpa] 0.900 0.998 0.821 0.0
225445867583 PREDICTED: leucine aminopeptidase 2, chl 0.933 0.933 0.797 0.0
147836469583 hypothetical protein VITISV_029979 [Viti 0.933 0.933 0.793 0.0
297743644528 unnamed protein product [Vitis vinifera] 0.900 0.994 0.814 0.0
356564901631 PREDICTED: leucine aminopeptidase 3, chl 0.965 0.892 0.733 0.0
297798874583 cytosol aminopeptidase family protein [A 0.912 0.912 0.797 0.0
15235763583 leucine aminopeptidase 3 [Arabidopsis th 0.900 0.900 0.798 0.0
357480067567 Leucine aminopeptidase [Medicago truncat 0.886 0.911 0.783 0.0
15224101520 leucine aminopeptidase 1 [Arabidopsis th 0.888 0.996 0.779 0.0
>gi|255576991|ref|XP_002529380.1| leucine aminopeptidase, putative [Ricinus communis] gi|223531128|gb|EEF32976.1| leucine aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/526 (83%), Positives = 485/526 (92%), Gaps = 1/526 (0%)

Query: 57  MAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNS 116
           MAHS+ARATLGLT+PA +D  KISF+AKE+DVVEWKGDILAVGVTEKDM KD ++KF NS
Sbjct: 62  MAHSLARATLGLTQPANVDVPKISFSAKEIDVVEWKGDILAVGVTEKDMTKDKSTKFDNS 121

Query: 117 ILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSL 176
           +LKKLD  LGGLLSEASSEEDFTGKAGQS V+RLPG+GSKR+GLIGLGQSAS    FR+ 
Sbjct: 122 LLKKLDTHLGGLLSEASSEEDFTGKAGQSMVLRLPGLGSKRIGLIGLGQSASTTFAFRNF 181

Query: 177 GESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPV 236
           GE++AA AKAAQASNVA+VLAS++ +S+E KL  ASA+ASGTVLGT+ED R++SESKKPV
Sbjct: 182 GETIAATAKAAQASNVAIVLASAESISNELKLNTASAIASGTVLGTYEDARFKSESKKPV 241

Query: 237 SLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMY 296
            LKSVDI+G GTGP+L KKLKYAE VSSAVIFG+ELVNSPANVLTPAVLAEEASK+AS Y
Sbjct: 242 -LKSVDILGFGTGPDLAKKLKYAEDVSSAVIFGKELVNSPANVLTPAVLAEEASKIASTY 300

Query: 297 SDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTF 356
           SDVLSA IL  E+CKELKMGSYLGVAAASAN PHFIHL YKPPGG+ K KLALVGKGLTF
Sbjct: 301 SDVLSANILSAEQCKELKMGSYLGVAAASANPPHFIHLHYKPPGGTVKAKLALVGKGLTF 360

Query: 357 DSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG 416
           DSGGYNIKTGPGC IE MK+DMGG+AAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG
Sbjct: 361 DSGGYNIKTGPGCSIELMKFDMGGSAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG 420

Query: 417 MRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPS 476
           MRPGDI+TA+NGKTIEVNNTDAEGRLTLADAL+YACNQGVDK++DLATLTGACVVALGPS
Sbjct: 421 MRPGDIVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIVDLATLTGACVVALGPS 480

Query: 477 VAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAA 536
           +AG FTPSDDLANEV  A++ SGEK+WRMPLEESYWE MKSGVADMVNTGGRQGGAITAA
Sbjct: 481 IAGVFTPSDDLANEVFTAAEASGEKLWRMPLEESYWENMKSGVADMVNTGGRQGGAITAA 540

Query: 537 LFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNS 582
           LFLKQ+++EKVQWMHID+AGPVW+EK R+ATGFGIST+VEW+L NS
Sbjct: 541 LFLKQFINEKVQWMHIDMAGPVWNEKKRTATGFGISTLVEWILHNS 586

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224143950|ref|XP_002325134.1| predicted protein [Populus trichocarpa] gi|222866568|gb|EEF03699.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445867|ref|XP_002276114.1| PREDICTED: leucine aminopeptidase 2, chloroplastic isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147836469|emb|CAN66364.1| hypothetical protein VITISV_029979 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743644|emb|CBI36527.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356564901|ref|XP_003550685.1| PREDICTED: leucine aminopeptidase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297798874|ref|XP_002867321.1| cytosol aminopeptidase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313157|gb|EFH43580.1| cytosol aminopeptidase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15235763|ref|NP_194821.1| leucine aminopeptidase 3 [Arabidopsis thaliana] gi|85700452|sp|Q944P7.2|AMPL3_ARATH RecName: Full=Leucine aminopeptidase 3, chloroplastic; AltName: Full=Leucyl aminopeptidase 3; Short=LAP 3; AltName: Full=Proline aminopeptidase 3; AltName: Full=Prolyl aminopeptidase 3; Flags: Precursor gi|332660430|gb|AEE85830.1| leucine aminopeptidase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357480067|ref|XP_003610319.1| Leucine aminopeptidase [Medicago truncatula] gi|355511374|gb|AES92516.1| Leucine aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15224101|ref|NP_179997.1| leucine aminopeptidase 1 [Arabidopsis thaliana] gi|186502696|ref|NP_001118375.1| leucine aminopeptidase 1 [Arabidopsis thaliana] gi|231536|sp|P30184.1|AMPL1_ARATH RecName: Full=Leucine aminopeptidase 1; AltName: Full=Leucyl aminopeptidase 1; Short=LAP 1; AltName: Full=Proline aminopeptidase 1; AltName: Full=Prolyl aminopeptidase 1 gi|16394|emb|CAA45040.1| leucine aminopeptidase [Arabidopsis thaliana] gi|4115380|gb|AAD03381.1| putative leucine aminopeptidase [Arabidopsis thaliana] gi|17063168|gb|AAL32980.1| At2g24200/F27D4.11 [Arabidopsis thaliana] gi|30102470|gb|AAP21153.1| At2g24200/F27D4.11 [Arabidopsis thaliana] gi|330252445|gb|AEC07539.1| leucine aminopeptidase 1 [Arabidopsis thaliana] gi|330252446|gb|AEC07540.1| leucine aminopeptidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query583
TAIR|locus:2126684583 LAP2 "leucyl aminopeptidase 2" 0.900 0.900 0.747 1.3e-210
TAIR|locus:2047500520 LAP1 "leucyl aminopeptidase 1" 0.883 0.990 0.747 3.7e-206
TAIR|locus:2126669581 AT4G30910 [Arabidopsis thalian 0.912 0.915 0.709 9.4e-201
GENEDB_PFALCIPARUM|PF14_0439605 PF14_0439 "leucine aminopeptid 0.605 0.583 0.418 1.8e-71
UNIPROTKB|Q8IL11605 LAP "M17 leucyl aminopeptidase 0.605 0.583 0.418 1.8e-71
TIGR_CMR|GSU_0332496 GSU_0332 "aminopeptidase A/I" 0.787 0.925 0.358 2.4e-69
UNIPROTKB|Q4KHT6496 pepA "Probable cytosol aminope 0.780 0.917 0.343 9.2e-68
TIGR_CMR|CPS_0740501 CPS_0740 "cytosol aminopeptida 0.780 0.908 0.362 1.2e-67
TIGR_CMR|DET_1030495 DET_1030 "cytosol aminopeptida 0.790 0.931 0.356 1.7e-66
UNIPROTKB|Q887M0496 pepA "Probable cytosol aminope 0.771 0.907 0.347 5.8e-66
TAIR|locus:2126684 LAP2 "leucyl aminopeptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2036 (721.8 bits), Expect = 1.3e-210, P = 1.3e-210
 Identities = 393/526 (74%), Positives = 447/526 (84%)

Query:    57 MAHSIARATLGLTKPAQIDPLKISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNS 116
             MAH+I+ ATLGLT+   +D  KISF+ KE+DV EWKGDILAVGVTEKDM KD NSKF+N 
Sbjct:    57 MAHTISHATLGLTQANSVDHPKISFSGKEIDVTEWKGDILAVGVTEKDMAKDVNSKFENP 116

Query:   117 ILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLPGIGSKRVGLIGLGQSASRAGDFRSL 176
             ILKKLDA LGGLL++ SSEEDF+GK GQSTV+RLPG+GSKRVGLIGLG+SAS    F+SL
Sbjct:   117 ILKKLDAHLGGLLADVSSEEDFSGKPGQSTVLRLPGLGSKRVGLIGLGKSASTPSAFQSL 176

Query:   177 GESXXXXXXXXXXXXXXXXLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPV 236
             GE+                LASS+ +S+ESKL +ASA+ASGTVLG FED+RY+SESKKP 
Sbjct:   177 GEAVAAAAKASQASSVAVVLASSESVSNESKLCSASAIASGTVLGLFEDSRYKSESKKP- 235

Query:   237 SLKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMY 296
             SLKSVDIIG G+GPELEKKLKYAEHVS  VIFG+ELVNSPANVLTPAVLAEEA  +ASMY
Sbjct:   236 SLKSVDIIGFGSGPELEKKLKYAEHVSYGVIFGKELVNSPANVLTPAVLAEEALNLASMY 295

Query:   297 SDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTF 356
             SDV++A IL+ E+CKELKMGSYL VAAASAN PHFIHL YKP  G  K KLALVGKGLTF
Sbjct:   296 SDVMTANILNEEQCKELKMGSYLAVAAASANPPHFIHLIYKPSSGPVKTKLALVGKGLTF 355

Query:   357 DSGGYNIKTGPGCLIENMKYDMXXXXXXXXXXXXXXQIKPPGVEVHFIVAACENMISGTG 416
             DSGGYNIKTGPGCLIE MK+DM              QIKPPGVEVHFIVAACENMISGTG
Sbjct:   356 DSGGYNIKTGPGCLIELMKFDMGGSAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTG 415

Query:   417 MRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPS 476
             MRPGD++TA+NGKTIEVNNTDAEGRLTLADAL+YACNQGVDKV+DLATLTGAC++ALG S
Sbjct:   416 MRPGDVLTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKVVDLATLTGACIIALGTS 475

Query:   477 VAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAA 536
             +AG +TPSD LA EV+AAS+ SGEK+WRMP+EESYWEMMKSGVADMVNTGGR GG+ITAA
Sbjct:   476 MAGIYTPSDKLAKEVIAASERSGEKLWRMPMEESYWEMMKSGVADMVNTGGRAGGSITAA 535

Query:   537 LFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKNS 582
             LFLKQ+V E V+WMHID+AGPVW+EK ++ATGFG++T+VEWV  +S
Sbjct:   536 LFLKQFVSEDVEWMHIDMAGPVWNEKKKAATGFGVATLVEWVQNHS 581
GO:0004177 "aminopeptidase activity" evidence=IEA;ISS;IDA
GO:0005622 "intracellular" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008235 "metalloexopeptidase activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0019538 "protein metabolic process" evidence=IEA
GO:0030145 "manganese ion binding" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0010150 "leaf senescence" evidence=IMP
TAIR|locus:2047500 LAP1 "leucyl aminopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126669 AT4G30910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF14_0439 PF14_0439 "leucine aminopeptidase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IL11 LAP "M17 leucyl aminopeptidase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0332 GSU_0332 "aminopeptidase A/I" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KHT6 pepA "Probable cytosol aminopeptidase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_0740 CPS_0740 "cytosol aminopeptidase A" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1030 DET_1030 "cytosol aminopeptidase family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|Q887M0 pepA "Probable cytosol aminopeptidase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42876AMPL2_SOLLC3, ., 4, ., 1, 1, ., 50.76670.91250.9349N/Ano
Q3M9J6AMPA_ANAVT3, ., 4, ., 1, 1, ., 1, 00.49490.81130.9633yesno
B0CCF6AMPA_ACAM13, ., 4, ., 1, 1, ., 1, 00.48330.82500.9776yesno
P31427AMPL_SOLTU3, ., 4, ., 1, 1, ., 50.70570.91080.9267N/Ano
Q7VAP4AMPA_PROMA3, ., 4, ., 1, 1, ., 1, 00.46090.83190.9778yesno
O06865AMPA_SYNE73, ., 4, ., 1, 1, ., 1, 00.48810.82330.9876yesno
Q11A96AMPA_TRIEI3, ., 4, ., 1, 1, ., 1, 00.4720.81640.9596yesno
P30184AMPL1_ARATH3, ., 4, ., 1, 1, ., 50.77940.88850.9961nono
B1WR01AMPA_CYAA53, ., 4, ., 1, 1, ., 1, 00.49100.81130.9653yesno
Q3AZE8AMPA_SYNS93, ., 4, ., 1, 1, ., 1, 00.45180.80960.9632yesno
Q2JRU4AMPA_SYNJA3, ., 4, ., 1, 1, ., 1, 00.53640.75980.8686yesno
Q944P7AMPL3_ARATH3, ., 4, ., 1, 1, ., 50.79840.90050.9005yesno
A8G6E3AMPA_PROM23, ., 4, ., 1, 1, ., 1, 00.42510.82160.9775yesno
Q7V5X8AMPA_PROMM3, ., 4, ., 1, 1, ., 1, 00.4580.80610.9591yesno
Q8DI46AMPA_THEEB3, ., 4, ., 1, 1, ., 1, 00.48520.80100.9396yesno
O67868AMPA_AQUAE3, ., 4, ., 1, 1, ., 1, 00.39720.80440.9513yesno
A3PEG6AMPA_PROM03, ., 4, ., 1, 1, ., 1, 00.42710.82160.9775yesno
Q3AHT4AMPA_SYNSC3, ., 4, ., 1, 1, ., 1, 00.44940.82160.9795yesno
B7K4A4AMPA_CYAP83, ., 4, ., 1, 1, ., 1, 00.48700.80440.9551yesno
Q0I816AMPA_SYNS33, ., 4, ., 1, 1, ., 1, 00.43630.80270.9435yesno
A8ML24AMPA_ALKOO3, ., 4, ., 1, 1, ., 1, 00.38260.80440.9398yesno
B0JL23AMPA_MICAN3, ., 4, ., 1, 1, ., 1, 00.48230.83010.9877yesno
Q5N569AMPA_SYNP63, ., 4, ., 1, 1, ., 1, 00.48610.82330.9876yesno
B2J3G8AMPA_NOSP73, ., 4, ., 1, 1, ., 1, 00.50500.81130.9594yesno
A5GN62AMPA_SYNPW3, ., 4, ., 1, 1, ., 1, 00.43390.82670.9776yesno
Q2JKL5AMPA_SYNJB3, ., 4, ., 1, 1, ., 1, 00.51820.75810.8666yesno
Q7V0D4AMPA_PROMP3, ., 4, ., 1, 1, ., 1, 00.42510.82160.9755yesno
B1XK83AMPA_SYNP23, ., 4, ., 1, 1, ., 1, 00.51590.76670.9103yesno
B8HTK3AMPA_CYAP43, ., 4, ., 1, 1, ., 1, 00.4820.80610.9533yesno
Q319F5AMPA_PROM93, ., 4, ., 1, 1, ., 1, 00.42510.82160.9775yesno
Q10712AMPL1_SOLLC3, ., 4, ., 1, 1, ., 50.69200.91420.9334N/Ano
B7KCB0AMPA_CYAP73, ., 4, ., 1, 1, ., 1, 00.48920.82160.9775yesno
A2BSQ4AMPA_PROMS3, ., 4, ., 1, 1, ., 1, 00.43390.82330.9795yesno
Q8RX72AMPL2_ARATH3, ., 4, ., 1, 1, ., 50.76020.91250.9156nono
Q8Z064AMPA_NOSS13, ., 4, ., 1, 1, ., 1, 00.49890.81130.9633yesno
Q7U8Q1AMPA_SYNPX3, ., 4, ., 1, 1, ., 1, 00.42880.81810.9794yesno
Q3A831AMPA_PELCD3, ., 4, ., 1, 1, ., 1, 00.39070.80440.9436yesno
Q6K669AMPL2_ORYSJ3, ., 4, ., 1, 1, ., 50.77190.90560.8829yesno
Q2QSB9AMPL1_ORYSJ3, ., 4, ., 1, 1, ., 50.67090.87650.9428yesno
A9BBV5AMPA_PROM43, ., 4, ., 1, 1, ., 1, 00.44420.80270.9492yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.50.979
3rd Layer3.4.11.10.979
3rd Layer3.4.110.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XVIII.3218.1
hypothetical protein (526 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.145.154.1
hypothetical protein (564 aa)
     •• 0.906
gw1.I.2970.1
hypothetical protein (547 aa)
     •• 0.905
fgenesh4_pg.C_LG_V000227
hypothetical protein (624 aa)
     •  0.899
estExt_fgenesh4_pm.C_LG_III0405
gamma-glutamylcysteine synthetase (EC-6.3.2.2) (527 aa)
     •  0.899
estExt_Genewise1_v1.C_LG_I8937
gamma-glutamylcysteine synthetase (EC-6.3.2.2) (527 aa)
     •  0.899
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.800
gw1.XIV.1323.1
cysteine synthase/L-3-cyanoalanine synthase (EC-4.4.1.9) (342 aa)
     •  0.800
SHMT2
precursor of transferase serine hydroxymethyltransferase 2 (EC-2.1.2.1); Interconversion of ser [...] (518 aa)
     •  0.800
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.800
gw1.142.135.1
hypothetical protein (336 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query583
PRK00913483 PRK00913, PRK00913, multifunctional aminopeptidase 0.0
cd00433468 cd00433, Peptidase_M17, Cytosol aminopeptidase fam 0.0
COG0260485 COG0260, PepB, Leucyl aminopeptidase [Amino acid t 1e-174
pfam00883311 pfam00883, Peptidase_M17, Cytosol aminopeptidase f 1e-170
PRK05015424 PRK05015, PRK05015, aminopeptidase B; Provisional 8e-76
PTZ00412569 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisi 3e-56
pfam02789126 pfam02789, Peptidase_M17_N, Cytosol aminopeptidase 2e-21
>gnl|CDD|234863 PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional Back     alignment and domain information 
 Score =  576 bits (1488), Expect = 0.0
 Identities = 215/506 (42%), Positives = 297/506 (58%), Gaps = 31/506 (6%)

Query: 81  FAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTG 140
           F+ K     + K D L VGV E+           +   ++LD    G LS      DF G
Sbjct: 3   FSVKSGSPEKQKSDCLVVGVPERL----------SPAAEQLDKASDGYLSALLKRGDFKG 52

Query: 141 KAGQSTVIR-LPGIGSKRVGLIGLGQSASRAGDFRSLGESVAAAAKAAQASNVAVVLASS 199
           KAG++ ++  +PG+ ++RV L+GLG+      D   L ++   AA+A + + V   +   
Sbjct: 53  KAGETLLLHAVPGVLAERVLLVGLGKEE--ELDEEQLRKAAGKAARALKKTKVKEAVIFL 110

Query: 200 DGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVSLKSVDIIGLGTGPELEKKLKYA 259
             L    K   A A A G +LG +  ++Y+S+ +    L+ +  +      E EK + + 
Sbjct: 111 TELHTYWK---ARAAAEGALLGLYRFDKYKSKKEPRRPLEKLVFLVPTRLTEAEKAIAHG 167

Query: 260 EHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYL 319
           E ++  V   R+LVN P N+LTPA LAE A ++A  Y   L   +LD ++ ++L MG+ L
Sbjct: 168 EAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYG--LEVEVLDEKEMEKLGMGALL 225

Query: 320 GVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMG 379
            V   SAN P  I L YK         +ALVGKGLTFDSGG ++K   G  ++ MKYDMG
Sbjct: 226 AVGQGSANPPRLIVLEYKGGKK----PIALVGKGLTFDSGGISLKPAAG--MDEMKYDMG 279

Query: 380 GAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAE 439
           GAAAVLG  +A+ ++K P V V  +VAACENM SG   RPGD++T+ +GKTIEV NTDAE
Sbjct: 280 GAAAVLGTMRALAELKLP-VNVVGVVAACENMPSGNAYRPGDVLTSMSGKTIEVLNTDAE 338

Query: 440 GRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSG 499
           GRL LADAL YA     D +ID+ATLTGACVVALG   AG  + +D+LA+E++ A + SG
Sbjct: 339 GRLVLADALTYAERFKPDAIIDVATLTGACVVALGHHTAGLMSNNDELADELLKAGEESG 398

Query: 500 EKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVW 559
           E+ WR+PL + Y E +KS  ADM N GGR GGAITAA FL ++V EK  W H+DIAG  W
Sbjct: 399 ERAWRLPLGDEYQEQLKSPFADMANIGGRPGGAITAACFLSRFV-EKYPWAHLDIAGTAW 457

Query: 560 SEKMRS-----ATGFGISTMVEWVLK 580
           + K        ATG G+  +V+++  
Sbjct: 458 NSKAWGYNPKGATGRGVRLLVQFLEN 483

Length = 483
>gnl|CDD|238247 cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>gnl|CDD|223338 COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|216171 pfam00883, Peptidase_M17, Cytosol aminopeptidase family, catalytic domain Back     alignment and domain information
>gnl|CDD|235330 PRK05015, PRK05015, aminopeptidase B; Provisional Back     alignment and domain information
>gnl|CDD|240407 PTZ00412, PTZ00412, leucyl aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|217232 pfam02789, Peptidase_M17_N, Cytosol aminopeptidase family, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 583
PRK00913483 multifunctional aminopeptidase A; Provisional 100.0
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 100.0
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 100.0
PTZ00412569 leucyl aminopeptidase; Provisional 100.0
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 100.0
PRK05015424 aminopeptidase B; Provisional 100.0
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 100.0
PF02789126 Peptidase_M17_N: Cytosol aminopeptidase family, N- 99.76
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-142  Score=1160.33  Aligned_cols=474  Identities=44%  Similarity=0.682  Sum_probs=430.8

Q ss_pred             EEEeecCCcccccccEEEEEEecCCCCCCCCcccchhHHHHHHHHhhHHHHHHHhcCCCCCCCCcEEEEecC-CCCccEE
Q 007947           80 SFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLP-GIGSKRV  158 (583)
Q Consensus        80 ~~~~~~~~~~~~~~D~LVVgV~e~~~~~~~~s~~~~~~~~~ld~~l~g~Ls~~~~~~~f~Gk~Ge~~~l~~~-~~~~~rv  158 (583)
                      .|+.+...+..++.|++|||++ ..         ..+....+|+.+++.++++++..+|+||.||++.++.+ +...+++
T Consensus         2 ~~~~~~~~~~~~~~~~~vv~~~-~~---------~~~~~~~ld~~~~g~l~~~~~~~~f~gk~ge~~~l~~~~g~~~~~v   71 (483)
T PRK00913          2 EFSVKSGSPEKQKSDCLVVGVP-ER---------LSPAAEQLDKASDGYLSALLKRGDFKGKAGETLLLHAVPGVLAERV   71 (483)
T ss_pred             eEEEeccCcccccCCEEEEEec-cc---------cchhHHHHhhhhhHHHHHHHHhCCCCCCCCCEEEEecCCCCccceE
Confidence            3444555556678899999998 21         24456788999999999999999999999999988754 4678999


Q ss_pred             EEEecCCCC-CChHHHHHHHHHHHHHHHHcccCcEEEEecCCCCCCchhHHHHHHHHHHHHHhccccCccccCCCCCCCC
Q 007947          159 GLIGLGQSA-SRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPVS  237 (583)
Q Consensus       159 llVGLGk~~-~~~~~~r~~~~a~a~~~k~~~~~~v~i~l~~~~~~~~~~~~~~~~a~aeG~~lg~Y~f~~yKs~~~~~~~  237 (583)
                      ++||||+.+ ++.+.+|++++++++.+++.+.+++.+.++.+.      ....+++++||+.|+.|+|++||+++++...
T Consensus        72 i~vGlG~~~~~~~~~~r~a~a~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~eg~~l~~y~f~~~k~~~~~~~~  145 (483)
T PRK00913         72 LLVGLGKEEELDEEQLRKAAGKAARALKKTKVKEAVIFLTELH------TYWKARAAAEGALLGLYRFDKYKSKKEPRRP  145 (483)
T ss_pred             EEEEeCCcccCCHHHHHHHHHHHHHHhhhcCceEEEEecCccC------cHHHHHHHHHHHHHcCccccccCCCCcccCC
Confidence            999999865 788999999999999998888877777665432      2346889999999999999999997543324


Q ss_pred             ccEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHhhhcCCceEEEEeCHHHHHHcCCCc
Q 007947          238 LKSVDIIGLGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGS  317 (583)
Q Consensus       238 l~~v~~~~~~~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~N~ltP~~~A~~a~~~~~~~~~~~~v~V~d~~~l~~~gmg~  317 (583)
                      +.++.++......+.++.+++++++++++++||||+|+|||+|||++||+++++++++++  ++|+|+|++||+++|||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g--~~v~V~~~~~l~~~gmg~  223 (483)
T PRK00913        146 LEKLVFLVPTRLTEAEKAIAHGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYG--LEVEVLDEKEMEKLGMGA  223 (483)
T ss_pred             ccEEEEEcCCcchHHHHHHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcC--CEEEEEeHHHHHhCCCCc
Confidence            667777642112456788999999999999999999999999999999999999999884  999999999999999999


Q ss_pred             hhhhcccCCCCCeEEEEEEcCCCCCCCceEEEEecceeecCCCCCCCCCCcccccccccccchHHHHHHHHHHHHhcCCC
Q 007947          318 YLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPP  397 (583)
Q Consensus       318 llaV~~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGiTFDsGG~slKp~~~~~M~~MK~DM~GAAaVlga~~aia~lklp  397 (583)
                      ||+|||||.+|||||+|+|+|+ +   ++|+|||||||||||||||||+.  +|++||+||+|||+|+|+|+||++||+|
T Consensus       224 ~laVg~GS~~~prli~l~Y~g~-~---~~i~LVGKGITFDsGG~slKp~~--~M~~MK~DM~GAAaVlga~~aia~lkl~  297 (483)
T PRK00913        224 LLAVGQGSANPPRLIVLEYKGG-K---KPIALVGKGLTFDSGGISLKPAA--GMDEMKYDMGGAAAVLGTMRALAELKLP  297 (483)
T ss_pred             EEEEeccCCCCCeEEEEEECCC-C---CeEEEEcCceEecCCCccCCCCc--ChhhcccccHhHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999983 3   79999999999999999999998  8999999999999999999999999999


Q ss_pred             ceEEEEEEeecccCCCCCCCCCCcEEEccCCcEEEeecCCccCceehhhhhhHHHhcCCCeEEEecchhHHHHHhhCCCe
Q 007947          398 GVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSV  477 (583)
Q Consensus       398 ~vnV~~ii~~~ENm~sg~A~rPGDVvts~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~  477 (583)
                       |||++++|+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||+++
T Consensus       298 -vnV~~v~~l~ENm~~~~A~rPgDVi~~~~GkTVEV~NTDAEGRLvLADal~ya~~~~p~~iiDiATLTGa~~vALG~~~  376 (483)
T PRK00913        298 -VNVVGVVAACENMPSGNAYRPGDVLTSMSGKTIEVLNTDAEGRLVLADALTYAERFKPDAIIDVATLTGACVVALGHHT  376 (483)
T ss_pred             -ceEEEEEEeeccCCCCCCCCCCCEEEECCCcEEEeecCCcccceeehhHHHHhhhcCCCEEEEecchHHHHHHHcCCCc
Confidence             9999999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             EEEeeCCHHHHHHHHHHHHHhCCceeeCCCChhHHhhccCcccccccCCCCCCchhHHHHHHhhccCCCCCeEEeeeccc
Q 007947          478 AGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGP  557 (583)
Q Consensus       478 agvfsn~~~l~~~l~~ag~~~gE~~WrlPl~~~y~~~lkS~vADl~N~g~~~~gaitAA~FL~~Fv~~~~~WaHlDIAG~  557 (583)
                      +|+|+|||+|++++++||+++||++|||||+++|+++|||++|||+|+|+|+||+||||+||+||| +++||+|||||||
T Consensus       377 ag~~sn~~~l~~~~~~a~~~~gE~~WrlPl~~~y~~~l~S~vADl~N~~~~~~ga~~AA~FL~~Fv-~~~~WaHlDIAG~  455 (483)
T PRK00913        377 AGLMSNNDELADELLKAGEESGERAWRLPLGDEYQEQLKSPFADMANIGGRPGGAITAACFLSRFV-EKYPWAHLDIAGT  455 (483)
T ss_pred             EEEEeCCHHHHHHHHHHHHHHCCceeecCCCHHHHhHCCCchhhhcCCCCCCccccHHHHHHHHhC-CCCCEEEEECCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999 5799999999999


Q ss_pred             CCCCC-----CCCcccchHHHHHHHHH
Q 007947          558 VWSEK-----MRSATGFGISTMVEWVL  579 (583)
Q Consensus       558 a~~~~-----~kgaTG~gVrtL~~~l~  579 (583)
                      +|.++     ++|+||||||||+||++
T Consensus       456 a~~~~~~~~~~~g~tG~gvrtL~~~l~  482 (483)
T PRK00913        456 AWNSKAWGYNPKGATGRGVRLLVQFLE  482 (483)
T ss_pred             cccCCCCCCCCCCceeHHHHHHHHHHh
Confidence            99763     48999999999999997

>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>PF02789 Peptidase_M17_N: Cytosol aminopeptidase family, N-terminal domain; InterPro: IPR008283 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query583
3kqx_A528 Structure Of A Protease 1 Length = 528 9e-76
3jru_B490 Crystal Structure Of Leucyl Aminopeptidase (Pepa) F 8e-67
3h8e_A497 Low Ph Native Structure Of Leucine Aminopeptidase F 2e-65
1gyt_A503 E. Coli Aminopeptidase A (Pepa) Length = 503 7e-65
2ewb_A486 The Crystal Structure Of Bovine Lens Leucine Aminop 1e-52
1lcp_A484 Bovine Lens Leucine Aminopeptidase Complexed With L 1e-52
2j9a_A487 Bllap In Complex With Microginin Fr1 Length = 487 1e-52
1bpm_A487 Differentiation And Identification Of The Two Catal 1e-52
1bll_E488 X-Ray Crystallographic Determination Of The Structu 1e-52
3ij3_A482 1.8 Angstrom Resolution Crystal Structure Of Cytoso 1e-46
3pei_A486 Crystal Structure Of Cytosol Aminopeptidase From Fr 1e-44
3kzw_A515 Crystal Structure Of Cytosol Aminopeptidase From St 2e-44
2hb6_A491 Structure Of Caenorhabditis Elegans Leucine Aminope 2e-33
4efd_A522 Crystal Structure Of An M17 Aminopeptidase From Try 4e-32
>pdb|3KQX|A Chain A, Structure Of A Protease 1 Length = 528 Back     alignment and structure 
Iteration: 1

 Score =  281 bits (718), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 150/361 (41%), Positives = 221/361 (61%), Gaps = 8/361 (2%)
Query: 225 DNRYRSESKKPVSLKSVDIIG--LGTGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTP 282
           D R++S + K V+++ +  +G  +      +++++ A        +  +L+ +P+N   P
Sbjct: 166 DERFKS-TDKNVNMEYIKHLGVYINNADTYKEEVEKARVYYFGTYYASQLIAAPSNYCNP 224
Query: 283 AVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPGGS 342
             L+  A ++A   +  L   IL +++ +ELKMG+YL V   S     FIHL YK  G  
Sbjct: 225 VSLSNAAVELAQKLN--LEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKG-D 281
Query: 343 AKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMXXXXXXXXXXXXXXQIKPPGVEVH 402
            K K+ALVGKG+TFDSGGYN+K  PG +I+ MK+DM               +KP  VE+H
Sbjct: 282 VKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIH 341
Query: 403 FIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDL 462
           F+ A CENM+S    RPGDIITA+NGKTIEV NTDAEGRLTLADAL+YA   GVD ++D+
Sbjct: 342 FLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKLGVDYIVDI 401
Query: 463 ATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADM 522
           ATLTGA + +LG S AG F  +++L N+++ +S+ S E +W +P+   Y   + S  AD+
Sbjct: 402 ATLTGAMLYSLGTSYAGVFGNNEELINKILQSSKTSNEPVWWLPIINEYRATLNSKYADI 461
Query: 523 VN-TGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEKMRSATGFGISTMVEWVLKN 581
              +   +  +I A+LFLK++V +   W HIDIAG  W+ K R   GFG+  + E+VL +
Sbjct: 462 NQISSSVKASSIVASLFLKEFV-QNTAWAHIDIAGVSWNFKARKPKGFGVRLLTEFVLND 520
Query: 582 S 582
           +
Sbjct: 521 A 521
>pdb|3JRU|B Chain B, Crystal Structure Of Leucyl Aminopeptidase (Pepa) From Xoo0834, Xanthomonas Oryzae Pv. Oryzae Kacc10331 Length = 490 Back     alignment and structure
>pdb|3H8E|A Chain A, Low Ph Native Structure Of Leucine Aminopeptidase From Pseud Putida Length = 497 Back     alignment and structure
>pdb|1GYT|A Chain A, E. Coli Aminopeptidase A (Pepa) Length = 503 Back     alignment and structure
>pdb|2EWB|A Chain A, The Crystal Structure Of Bovine Lens Leucine Aminopeptidase In Complex With Zofenoprilat Length = 486 Back     alignment and structure
>pdb|1LCP|A Chain A, Bovine Lens Leucine Aminopeptidase Complexed With L-Leucine Phosphonic Acid Length = 484 Back     alignment and structure
>pdb|2J9A|A Chain A, Bllap In Complex With Microginin Fr1 Length = 487 Back     alignment and structure
>pdb|1BPM|A Chain A, Differentiation And Identification Of The Two Catalytic Metal Binding Sites In Bovine Lens Leucine Aminopeptidase By X-Ray Crystallography Length = 487 Back     alignment and structure
>pdb|1BLL|E Chain E, X-Ray Crystallographic Determination Of The Structure Of Bovine Lens Leucine Aminopeptidase Complexed With Amastatin: Formulation Of A Catalytic Mechanism Featuring A Gem-Diolate Transition State Length = 488 Back     alignment and structure
>pdb|3IJ3|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Cytosol Aminopeptidase From Coxiella Burnetii Length = 482 Back     alignment and structure
>pdb|3PEI|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Francisella Tularensis Length = 486 Back     alignment and structure
>pdb|3KZW|A Chain A, Crystal Structure Of Cytosol Aminopeptidase From Staphylococcus Aureus Col Length = 515 Back     alignment and structure
>pdb|2HB6|A Chain A, Structure Of Caenorhabditis Elegans Leucine Aminopeptidase (Lap1) Length = 491 Back     alignment and structure
>pdb|4EFD|A Chain A, Crystal Structure Of An M17 Aminopeptidase From Trypanosoma Brucei, Tb427tmp.02.4440 Length = 522 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query583
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 0.0
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 0.0
3kr4_A528 M17 leucyl aminopeptidase; protease, hydrolase; HE 0.0
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 0.0
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 0.0
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 0.0
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 0.0
4efd_A522 Aminopeptidase; structural genomics, structural ge 1e-171
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 1e-168
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 1e-157
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Length = 503 Back     alignment and structure
 Score =  579 bits (1494), Expect = 0.0
 Identities = 161/508 (31%), Positives = 259/508 (50%), Gaps = 19/508 (3%)

Query: 81  FAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTG 140
           F+ K     + +   + VGV E         +  + I ++LD    G +S      +  G
Sbjct: 3   FSVKSGSPEKQRSACIVVGVFEP--------RRLSPIAEQLDKISDGYISALLRRGELEG 54

Query: 141 KAGQSTVIR-LPGIGSKRVGLIGLGQSASR-AGDFRSLGESVAAAAKAAQASNVAVVLAS 198
           K GQ+ ++  +P + S+R+ LIG G+        ++ + +          +      L  
Sbjct: 55  KPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTE 114

Query: 199 SDGLSDESKLTAASAVASGTVLGTFEDNRYRS---ESKKPVSLKSVDIIGLGTGPELEKK 255
              +   +                +  ++ ++   E ++P+     ++         E+ 
Sbjct: 115 LH-VKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERA 173

Query: 256 LKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKM 315
           +++   +++ +   ++L N P N+   A LA +A ++A  YS  +   ++  ++ KEL M
Sbjct: 174 IQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGM 233

Query: 316 GSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMK 375
            SYL V   S N      + YK         + LVGKGLTFDSGG +IK   G  ++ MK
Sbjct: 234 HSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEG--MDEMK 291

Query: 376 YDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNN 435
           YDM GAAAV G  + + +++ P + V  ++A CENM  G   RPGD++T  +G+T+EV N
Sbjct: 292 YDMCGAAAVYGVMRMVAELQLP-INVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLN 350

Query: 436 TDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAAS 495
           TDAEGRL L D L Y      + VID+ATLTGACV+ALG  + G     + LA+E++AAS
Sbjct: 351 TDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAAS 410

Query: 496 QVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIA 555
           + SG++ WR+PL + Y E ++S  ADM N GGR GGAITA  FL ++   K  W H+DIA
Sbjct: 411 EQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFT-RKYNWAHLDIA 469

Query: 556 GPVWSEKM-RSATGFGISTMVEWVLKNS 582
           G  W     + ATG  ++ + +++L  +
Sbjct: 470 GTAWRSGKAKGATGRPVALLAQFLLNRA 497
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Length = 497 Back     alignment and structure
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Length = 528 Back     alignment and structure
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Length = 490 Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Length = 486 Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Length = 515 Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Length = 484 Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Length = 522 Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Length = 482 Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Length = 491 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query583
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 100.0
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 100.0
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 100.0
3kr4_A528 M17 leucyl aminopeptidase; protease, hydrolase; HE 100.0
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 100.0
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 100.0
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 100.0
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 100.0
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 100.0
4efd_A522 Aminopeptidase; structural genomics, structural ge 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 83.24
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 81.91
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Back     alignment and structure
Probab=100.00  E-value=6.3e-147  Score=1192.04  Aligned_cols=489  Identities=34%  Similarity=0.568  Sum_probs=447.7

Q ss_pred             eEEEeecCCcccccccEEEEEEecCCCCCCCCcccchhHHHHHHHHhhHHHHHHHhcCCCCCCCCcEEEEecC-CCCccE
Q 007947           79 ISFAAKEVDVVEWKGDILAVGVTEKDMGKDDNSKFQNSILKKLDAQLGGLLSEASSEEDFTGKAGQSTVIRLP-GIGSKR  157 (583)
Q Consensus        79 ~~~~~~~~~~~~~~~D~LVVgV~e~~~~~~~~s~~~~~~~~~ld~~l~g~Ls~~~~~~~f~Gk~Ge~~~l~~~-~~~~~r  157 (583)
                      |+|+.++.++.++++|+|||+|+++.        .+++.++.+|+.+++.|+++++..+|+||.||++.++.+ +...+|
T Consensus         1 M~~~~~~~~~~~~~~d~lvv~v~~~~--------~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~r   72 (497)
T 3h8g_F            1 MELVVKSVAAASVKTATLVIPVGENR--------KLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAER   72 (497)
T ss_dssp             CEEEEECSCGGGCCBSCEEEEEEGGG--------CCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSC
T ss_pred             CEEEEEcCChhhccCCEEEEEEecCC--------ccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccE
Confidence            66777888888999999999999974        135678899999999999999999999999999998865 567899


Q ss_pred             EEEEecCCCC-CChHHHHHHHHHHHHHHHHcccCcEEEEecCCCCCCchhHHHHHHHHHHHHHhccccCccccCCCCCCC
Q 007947          158 VGLIGLGQSA-SRAGDFRSLGESVAAAAKAAQASNVAVVLASSDGLSDESKLTAASAVASGTVLGTFEDNRYRSESKKPV  236 (583)
Q Consensus       158 vllVGLGk~~-~~~~~~r~~~~a~a~~~k~~~~~~v~i~l~~~~~~~~~~~~~~~~a~aeG~~lg~Y~f~~yKs~~~~~~  236 (583)
                      |++||||+.+ ++.+.+|++++++++.+++.+.+++.+.++.......+...+.+++++||+.|+.|+|++||++++++.
T Consensus        73 v~lvGlG~~~~~~~~~~r~a~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~aeG~~l~~Y~f~~yks~~~~~~  152 (497)
T 3h8g_F           73 VLLVGSGKDEALGDRTWRKLVASVAGVLKGLNGADAVLALDDVAVNNRDAHYGKYRLLAETLLDGEYVFDRFKSQKVEPR  152 (497)
T ss_dssp             EEEEEEESSSCBCHHHHHHHHHHHHHHHHHSCCSEEEECCTTCCBTTSCTTTHHHHHHHHHHHHTTCCCCTTCSSCCCCC
T ss_pred             EEEEECCCcccCCHHHHHHHHHHHHHHHhhCCCceEEEecccccccccchhhHHHHHHHHHHHhcCccccccccCccCCC
Confidence            9999999986 788999999999999999999998888876532111111134578899999999999999999876543


Q ss_pred             CccEEEEEcCC-CchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHhhhcCCceEEEEeCHHHHHHcCC
Q 007947          237 SLKSVDIIGLG-TGPELEKKLKYAEHVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKM  315 (583)
Q Consensus       237 ~l~~v~~~~~~-~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~N~ltP~~~A~~a~~~~~~~~~~~~v~V~d~~~l~~~gm  315 (583)
                      .++++.++... +.++.++.+++++++++|+++||||+|+|||+|||++||+++++++++++ |++|+|+|++||+++||
T Consensus       153 ~l~~l~l~~~~~~~~~~~~~~~~~~~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~-g~~v~v~~~~~l~~~gm  231 (497)
T 3h8g_F          153 ALKKVTLLADKAGQAEVERAVKHASAIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHK-ALKVEVLDEKKIKDLGM  231 (497)
T ss_dssp             SCCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHTTC
T ss_pred             cccEEEEEcCCcchHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcC-CceEEEEeHHHHHhCCC
Confidence            57788887532 22456788999999999999999999999999999999999999999984 49999999999999999


Q ss_pred             CchhhhcccCCCCCeEEEEEEcCCCCCCCceEEEEecceeecCCCCCCCCCCcccccccccccchHHHHHHHHHHHHhcC
Q 007947          316 GSYLGVAAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIK  395 (583)
Q Consensus       316 g~llaV~~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGiTFDsGG~slKp~~~~~M~~MK~DM~GAAaVlga~~aia~lk  395 (583)
                      |+||+|||||.+|||||+|+|+|+ ++.+++|+|||||||||||||||||+.  +|++||+||+|||+|+|+|+++++||
T Consensus       232 g~~laVg~gS~~pPrli~l~y~g~-~~~~~~i~LVGKGiTFDsGG~slKp~~--~M~~Mk~DM~GAAaV~g~~~a~a~l~  308 (497)
T 3h8g_F          232 GAFYAVGQGSDQPPRLIVLNYQGG-KKADKPFVLVGKGITFDTGGISLKPGA--GMDEMKYDMCGAASVFGTLRAVLELQ  308 (497)
T ss_dssp             HHHHHHHTTSSSCCEEEEEEEECS-CTTSCCEEEEEEEEEEECCTTSCCCST--TGGGGGGTTHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEccCCCCCCEEEEEEECCC-CCCCCcEEEEcCceEeccCCccCCCcc--chhhccccchHHHHHHHHHHHHHHcC
Confidence            999999999999999999999994 456789999999999999999999998  89999999999999999999999999


Q ss_pred             CCceEEEEEEeecccCCCCCCCCCCcEEEccCCcEEEeecCCccCceehhhhhhHHHhcCCCeEEEecchhHHHHHhhCC
Q 007947          396 PPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGP  475 (583)
Q Consensus       396 lp~vnV~~ii~~~ENm~sg~A~rPGDVvts~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~  475 (583)
                      +| +||+++||+|||||||+|||||||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||+
T Consensus       309 l~-vnv~~~i~~~ENm~~g~A~rPgDVit~~~G~TVEV~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~vALG~  387 (497)
T 3h8g_F          309 LP-VNLVCLLACAENMPSGGATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYAERFKPQAVIDIATLTGACIVALGS  387 (497)
T ss_dssp             CS-SEEEEEEEEEEECCSTTSCCTTEEEECTTSCEEEESCTTCCHHHHHHHHHHHHGGGCCSEEEEEECCCHHHHHHHTT
T ss_pred             CC-eEEEEEEEeeccCCCCCCCCCCCEEEeCCCcEEEecCCCchhhhhhHHHHHHHHhcCCCEEEEecccHHHHHHHhCC
Confidence            99 99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEeeCCHHHHHHHHHHHHHhCCceeeCCCChhHHhhccCcccccccCCCCCCchhHHHHHHhhccCCCCCeEEeeec
Q 007947          476 SVAGAFTPSDDLANEVMAASQVSGEKIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIA  555 (583)
Q Consensus       476 ~~agvfsn~~~l~~~l~~ag~~~gE~~WrlPl~~~y~~~lkS~vADl~N~g~~~~gaitAA~FL~~Fv~~~~~WaHlDIA  555 (583)
                      +++|+|+|||+|+++|++||+.+||++||||||++|+++|||++|||+|+|+|+||+||||+||++||+ ++||+|||||
T Consensus       388 ~~~g~~sn~d~l~~~l~~ag~~~ge~~WrlPl~~~y~~~l~S~~ADl~N~g~~~~g~itAA~FL~~Fv~-~~~W~HlDIA  466 (497)
T 3h8g_F          388 HTTGLMGNNDDLVGQLLDAGKRADDRAWQLPLFDEYQEQLDSPFADMGNIGGPKAGTITAGCFLSRFAK-AYNWAHMDIA  466 (497)
T ss_dssp             TSEEEEESCHHHHHHHHHHHHHHTCCEEECCCCHHHHGGGCCSSSSEESCCCSSSHHHHHHHHHHTTCT-TSCEEEEECT
T ss_pred             CceEEEECCHHHHHHHHHHHHHhCCCeEeCCCCHHHHHhcCCCeeceeCCCCCchhhHHHHHHHHHhCC-CCCEEEEeCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999995 7999999999


Q ss_pred             ccCCCCC--CCCcccchHHHHHHHHHhc
Q 007947          556 GPVWSEK--MRSATGFGISTMVEWVLKN  581 (583)
Q Consensus       556 G~a~~~~--~kgaTG~gVrtL~~~l~~~  581 (583)
                      ||+|.++  ++|+||+|||||++||+++
T Consensus       467 G~a~~~~~~~~g~TG~~vr~L~~~l~~~  494 (497)
T 3h8g_F          467 GTAWISGGKDKGATGRPVPLLTQYLLDR  494 (497)
T ss_dssp             TTSEECSSTTCEECCTTHHHHHHHHHHH
T ss_pred             CCCccCCCCCCCcccHHHHHHHHHHHHh
Confidence            9999653  5899999999999999875
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A* Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 583
d1gyta2325 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-ter 9e-92
d1lama1325 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-ter 2e-77
d1lama2159 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminope 3e-17
d1gyta1178 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminope 3e-14
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 325 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Leucine aminopeptidase, C-terminal domain
domain: Leucine aminopeptidase, C-terminal domain
species: Escherichia coli, PepA [TaxId: 562]

 Score =  283 bits (724), Expect = 9e-92
 Identities = 135/320 (42%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 262 VSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGV 321
           +++ +   ++L N P N+   A LA +A ++A  YS  +   ++  ++ KEL M SYL V
Sbjct: 2   IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAV 61

Query: 322 AAASANLPHFIHLCYKPPGGSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGA 381
              S N      + YK         + LVGKGLTFDSGG +IK   G   + MKYDM GA
Sbjct: 62  GQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGM--DEMKYDMCGA 119

Query: 382 AAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPGDIITAANGKTIEVNNTDAEGR 441
           AAV G  + + +++ P + V  ++A CENM  G   RPGD++T  +G+T+EV NTDAEGR
Sbjct: 120 AAVYGVMRMVAELQLP-INVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGR 178

Query: 442 LTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGEK 501
           L L D L Y      + VID+ATLTGACV+ALG  + G     + LA+E++AAS+ SG++
Sbjct: 179 LVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDR 238

Query: 502 IWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSE 561
            WR+PL + Y E ++S  ADM N GGR GGAITA  FL ++   K  W H+DIAG  W  
Sbjct: 239 AWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFT-RKYNWAHLDIAGTAWRS 297

Query: 562 KMRS-ATGFGISTMVEWVLK 580
                ATG  ++ + +++L 
Sbjct: 298 GKAKGATGRPVALLAQFLLN 317
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 325 Back     information, alignment and structure
>d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 159 Back     information, alignment and structure
>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} Length = 178 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query583
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 100.0
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 100.0
d1gyta1178 Leucine aminopeptidase (Aminopeptidase A), N-termi 99.88
d1lama2159 Leucine aminopeptidase (Aminopeptidase A), N-termi 99.74
d2hgaa1103 Uncharacterized protein MTH1368 {Methanobacterium 89.8
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 84.96
d1yd9a1188 Histone macro-H2a1.1 {Rat (Rattus norvegicus) [Tax 84.85
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Leucine aminopeptidase, C-terminal domain
domain: Leucine aminopeptidase, C-terminal domain
species: Escherichia coli, PepA [TaxId: 562]

Probab=100.00  E-value=2.4e-124  Score=967.45  Aligned_cols=318  Identities=42%  Similarity=0.712  Sum_probs=306.7

Q ss_pred             HHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHhhhcCCceEEEEeCHHHHHHcCCCchhhhcccCCCCCeEEEEEEcCCC
Q 007947          261 HVSSAVIFGRELVNSPANVLTPAVLAEEASKVASMYSDVLSATILDIEKCKELKMGSYLGVAAASANLPHFIHLCYKPPG  340 (583)
Q Consensus       261 ~~a~~~~~aRdL~n~P~N~ltP~~~A~~a~~~~~~~~~~~~v~V~d~~~l~~~gmg~llaV~~GS~~pPrli~l~Y~g~~  340 (583)
                      ++++|+|+||||+|+|||+|||++|++++++++++++.+++|+|+|+++|+|+|||+||+|||||.+|||||+|+|+|++
T Consensus         1 Aia~gvn~aRdLvn~P~N~ltP~~~a~~a~~l~~~~~~~v~v~V~~~~~l~~~Gm~~llaVg~GS~~~p~li~l~y~~~~   80 (325)
T d1gyta2           1 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA   80 (325)
T ss_dssp             HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred             CHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCCeEEEEecHHHHHhCCCCCeeEEeeccCCCCCceEEEecCcc
Confidence            58999999999999999999999999999999998876799999999999999999999999999999999999999954


Q ss_pred             CCCCceEEEEecceeecCCCCCCCCCCcccccccccccchHHHHHHHHHHHHhcCCCceEEEEEEeecccCCCCCCCCCC
Q 007947          341 GSAKIKLALVGKGLTFDSGGYNIKTGPGCLIENMKYDMGGAAAVLGAAKAIGQIKPPGVEVHFIVAACENMISGTGMRPG  420 (583)
Q Consensus       341 ~~~~~~i~LVGKGiTFDsGG~slKp~~~~~M~~MK~DM~GAAaVlga~~aia~lklp~vnV~~ii~~~ENm~sg~A~rPG  420 (583)
                      ...+++|+|||||||||||||||||+.  +|++||+||+|||+|+|+|+++++||+| +||++++|+||||||++|||||
T Consensus        81 ~~~~~~i~lVGKGitFDTGG~slKp~~--~M~~Mk~DM~GAA~v~g~~~a~a~l~~~-~~v~~~~p~~EN~i~~~A~kPg  157 (325)
T d1gyta2          81 SEDARPIVLVGKGLTFDSGGISIKPSE--GMDEMKYDMCGAAAVYGVMRMVAELQLP-INVIGVLAGCENMPGGRAYRPG  157 (325)
T ss_dssp             CTTCCCEEEEEEEEEEECCTTSCCCST--TGGGGGGGGHHHHHHHHHHHHHHHHTCS-SEEEEEEEEEEECCSTTCCCTT
T ss_pred             cCCCCCEEEEccceEEecccccccccc--chhhhhhhcccchhHHHHHHHHHHhCcC-ceEEEEEehhhcccCCCcccCC
Confidence            444678999999999999999999988  8999999999999999999999999999 9999999999999999999999


Q ss_pred             cEEEccCCcEEEeecCCccCceehhhhhhHHHhcCCCeEEEecchhHHHHHhhCCCeEEEeeCCHHHHHHHHHHHHHhCC
Q 007947          421 DIITAANGKTIEVNNTDAEGRLTLADALIYACNQGVDKVIDLATLTGACVVALGPSVAGAFTPSDDLANEVMAASQVSGE  500 (583)
Q Consensus       421 DVvts~~GkTVEV~NTDAEGRLvLADaL~Ya~~~~p~~iIDiATLTGA~~vALG~~~agvfsn~~~l~~~l~~ag~~~gE  500 (583)
                      ||||+||||||||.||||||||||||+|+||++++|+.|||+|||||||++|||++++|+|+||+++++++.+|++++||
T Consensus       158 DVi~s~~GkTVEI~NTDAEGRLvLADaL~ya~~~~p~~iiD~ATLTGa~~~ALG~~~ag~~~n~~~~~~~~~~a~~~~ge  237 (325)
T d1gyta2         158 DVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGD  237 (325)
T ss_dssp             CEEECTTSCEEECSCTTCCHHHHHHHHHHHGGGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHHHHHTC
T ss_pred             CeeeccCCcEEEeeccCccchhhhhHHHHHHHhhCCceeecccccccceeeeccCceeEeeccchHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeCCCChhHHhhccCcccccccCCCCCCchhHHHHHHhhccCCCCCeEEeeecccCCCCC-CCCcccchHHHHHHHHH
Q 007947          501 KIWRMPLEESYWEMMKSGVADMVNTGGRQGGAITAALFLKQYVDEKVQWMHIDIAGPVWSEK-MRSATGFGISTMVEWVL  579 (583)
Q Consensus       501 ~~WrlPl~~~y~~~lkS~vADl~N~g~~~~gaitAA~FL~~Fv~~~~~WaHlDIAG~a~~~~-~kgaTG~gVrtL~~~l~  579 (583)
                      ++||||||++|++++||++|||+|+++++||+||||+||++|| +++||+|||||||+|... .+|+||+|||||+|||+
T Consensus       238 ~~w~lPl~~~~~~~~~S~~ADl~n~~~~~~g~~~aA~FL~~Fv-~~~~w~HlDIAg~a~~~~~~~gaTG~gvr~l~~~l~  316 (325)
T d1gyta2         238 RAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFT-RKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLL  316 (325)
T ss_dssp             CEEECCCCHHHHGGGCCSSSSEESCCCSTTHHHHHHHHHHTTC-TTSCEEEEECTTTSEECGGGCEECCTTHHHHHHHHH
T ss_pred             ccccccccHhHHhhcCCCccccccCCCCCchHHHHHHHHHHhC-CCCCEEEEecCCCCcCCCCCCCccchhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999 579999999999999654 58999999999999998


Q ss_pred             hcc
Q 007947          580 KNS  582 (583)
Q Consensus       580 ~~~  582 (583)
                      +++
T Consensus       317 ~~~  319 (325)
T d1gyta2         317 NRA  319 (325)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            764
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyta1 c.50.1.1 (A:1-178) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure
>d1lama2 c.50.1.1 (A:1-159) Leucine aminopeptidase (Aminopeptidase A), N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1yd9a1 c.50.1.2 (A:6-193) Histone macro-H2a1.1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure