Citrus Sinensis ID: 008001

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580--
Protein Sequence
MFVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPESSRVLRSRSHGSGERNKRKRWRERQDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHADSTQGSSQITISSNARVSEDGSSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccHHHHcccccccccccccccHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHcccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccEEEEEccccccccccccccHHHccccccccccEcccccccccccccccccccccccccccccccccccHccccccccccccccHccccccccccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccEEEccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHc
Coil and Loop (DISEMBL)
MFVSMFKEAYEEFKHVLLTFiydkddptspvaIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEfcfhqgvpspisdltdrllleerdppatpqeslyeappfdevDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGivdsglstpsgtqtisipikvdkpesgccssrncslemdcsisknsdgetsvsntimdgspenntdvisiQGADvelrftggptgsnedcstsgshqpessrvlrsrshgsgernkRKRWRErqddfcynpeislggcnkrelnsstlipstimsreqQENYEIVLGMKELAGKGMAAEAVEEINAMdadffvqnpmllFQLKQVEFLKLVSCGDHSGALRVACAHlgplaashpalLKPLKETLLALlqpnedvlvkgfplhtLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAmskshadstqgssqitissnarvsedgsspnqvssadfvcdeNAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Flexible Loop (DISEMBL)
MFVSMFKEAYEEFKHVLLTfiydkddptSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGivdsglstpsgtqtisipikvdkpesgCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQGADVELRFTGGPTgsnedcstsgshqpessrvlrsrshgsgernkrkrwrerqddfcynpeislggcnkrelnSSTLIpstimsreqQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSkshadstqgssQITISSNARVSEDGSSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Low Complexity Region (SEG)
MFVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISdltdrllleerdPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPESSRVLRSRSHGSGERNKRKRWRERQDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHpallkplketllallQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHADstqgssqitissNARVSEDGSSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Disordered region (IsUnstruct)
****MFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTD*L********************FDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLS******TISIPI**********************************************************************************************************DFCYNPEISLGGCN*********************NYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVA************************************DFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQI**
Disordered Region (DISOPRED)
***SMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSG********************SGCCSSRNCSLEMDC*************************************************************************************DFCYNPEISLGGCN*************************VLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNE*************TSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFK***********L*IDLLK*V************************************************CDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Disordered Region (DISEMBL)
MFVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQGADVELRFTGGP*************************************RERQDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVA**********************************SADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Disordered Region (DISPRO)
*FVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSG***********************CSSRNCSLEMDCSIS********************************************************************************QDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVY********************************************DFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPESSRVLRSRSHGSGERNKRKRWRERQDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHADSTQGSSQITISSNARVSEDGSSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	582
296082437	710	unnamed protein product [Vitis vinifera]	0.981	0.804	0.723	0.0
225438670	690	PREDICTED: uncharacterized protein LOC10	0.970	0.818	0.728	0.0
224084326	770	predicted protein [Populus trichocarpa]	0.955	0.722	0.735	0.0
255565128	685	conserved hypothetical protein [Ricinus	0.953	0.810	0.736	0.0
356565624	710	PREDICTED: uncharacterized protein LOC10	0.981	0.804	0.693	0.0
356514158	705	PREDICTED: uncharacterized protein LOC10	0.982	0.811	0.687	0.0
449448510	681	PREDICTED: uncharacterized protein LOC10	0.951	0.813	0.689	0.0
449531491	602	PREDICTED: uncharacterized LOC101218546,	0.817	0.790	0.675	0.0
110737502	732	hypothetical protein [Arabidopsis thalia	0.958	0.762	0.601	0.0
30698257	750	uncharacterized protein [Arabidopsis tha	0.958	0.744	0.599	0.0

>gi|296082437|emb|CBI21442.3| unnamed protein product [Vitis vinifera]

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/593 (72%), Positives = 497/593 (83%), Gaps = 22/593 (3%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDDPTS VA EW+ERRRF+IAGL+SSVLRAH+HAYDP+F+MT
Sbjct: 124 YPEAYEEFKHVLLAFIYDKDDPTSLVAPEWSERRRFDIAGLISSVLRAHMHAYDPLFSMT 183

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCF + + SPISDLT+RLLLEERDPPATPQESLYE PPFDEVDIQALAHA
Sbjct: 184 LRYLISIHKGFCFRERMSSPISDLTERLLLEERDPPATPQESLYEVPPFDEVDIQALAHA 243

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRFA+GDLFQAFQNELC++RLDVSMLDELVREYC+YRGIVDSGL++ SG
Sbjct: 244 VELTRQGAIDSLRFAKGDLFQAFQNELCRVRLDVSMLDELVREYCIYRGIVDSGLASSSG 303

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            +T+S P+KVD+P+ G  SSR+CSLE+DC  +K+SDGE+S+SN  M+ SPE N DV+   
Sbjct: 304 VRTLSEPLKVDQPDPGYSSSRSCSLEVDCETNKHSDGESSISNAHMNNSPEINADVVGTP 363

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCYN 304
             DVE+R++  PTG+ +DCSTS +H+PE+SRVL R RSHG+GER+KRKRWR R D   Y 
Sbjct: 364 RTDVEIRYSCEPTGNRDDCSTSETHRPENSRVLQRHRSHGTGERSKRKRWRGRYDKHDYV 423

Query: 305 PEIS--------------LGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGM 350
           P++               LGG    E N ST+ P  I +RE    YE VL MKELA +GM
Sbjct: 424 PDVQQELTATTLAIGTNLLGGQQGLE-NHSTVDP--IGNRENM--YETVLAMKELASRGM 478

Query: 351 AAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPA 410
           AAE VEE+N +D +FFVQNP+LLFQLKQVEFLKLVS GDHS ALRVAC+HLGPLAA+ P+
Sbjct: 479 AAEVVEEVNGIDPEFFVQNPVLLFQLKQVEFLKLVSLGDHSSALRVACSHLGPLAANDPS 538

Query: 411 LLKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHN 470
           LLK LKETLLALL+PNED L KG PLH LATSLQVAIGR LGIEEPQLMKI+RATLHTHN
Sbjct: 539 LLKALKETLLALLRPNEDALGKGLPLHALATSLQVAIGRWLGIEEPQLMKIMRATLHTHN 598

Query: 471 EWFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHAD-STQGSSQITISSNARVSED 529
           EWFK+QMCKDRFE LL+ID LKE+ TP L+  A+SKS+AD ST GSSQ+T+SS+ R+ +D
Sbjct: 599 EWFKIQMCKDRFEGLLKIDSLKEMNTPLLSN-AVSKSNADTSTNGSSQVTVSSSGRMVDD 657

Query: 530 GSSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
           GSSP Q+SS D VCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Sbjct: 658 GSSPTQMSSRDVVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 710

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438670|ref|XP_002282018.1| PREDICTED: uncharacterized protein LOC100244129 [Vitis vinifera]

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/579 (72%), Positives = 494/579 (85%), Gaps = 14/579 (2%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDDPTS VA EW+ERRRF+IAGL+SSVLRAH+HAYDP+F+MT
Sbjct: 124 YPEAYEEFKHVLLAFIYDKDDPTSLVAPEWSERRRFDIAGLISSVLRAHMHAYDPLFSMT 183

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCF + + SPISDLT+RLLLEERDPPATPQESLYE PPFDEVDIQALAHA
Sbjct: 184 LRYLISIHKGFCFRERMSSPISDLTERLLLEERDPPATPQESLYEVPPFDEVDIQALAHA 243

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRFA+GDLFQAFQNELC++RLDVSMLDELVREYC+YRGIVDSGL++ S 
Sbjct: 244 VELTRQGAIDSLRFAKGDLFQAFQNELCRVRLDVSMLDELVREYCIYRGIVDSGLAS-SS 302

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            +T+S P+KVD+P+ G  SSR+CSLE+DC  +K+SDGE+S+SN  M+ SPE N DV+   
Sbjct: 303 VRTLSEPLKVDQPDPGYSSSRSCSLEVDCETNKHSDGESSISNAHMNNSPEINADVVGTP 362

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCYN 304
             DVE+R++  PTG+ +DCSTS +H+PE+SRVL R RSHG+GER+KRKRWR R D   Y 
Sbjct: 363 RTDVEIRYSCEPTGNRDDCSTSETHRPENSRVLQRHRSHGTGERSKRKRWRGRYDKHDYV 422

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDAD 364
           P++      ++EL ++TL   T +    +  YE VL MKELA +GMAAE VEE+N +D +
Sbjct: 423 PDV------QQELTATTLAIGTNL----ENMYETVLAMKELASRGMAAEVVEEVNGIDPE 472

Query: 365 FFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQ 424
           FFVQNP+LLFQLKQVEFLKLVS GDHS ALRVAC+HLGPLAA+ P+LLK LKETLLALL+
Sbjct: 473 FFVQNPVLLFQLKQVEFLKLVSLGDHSSALRVACSHLGPLAANDPSLLKALKETLLALLR 532

Query: 425 PNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFES 484
           PNED L KG PLH LATSLQVAIGR LGIEEPQLMKI+RATLHTHNEWFK+QMCKDRFE 
Sbjct: 533 PNEDALGKGLPLHALATSLQVAIGRWLGIEEPQLMKIMRATLHTHNEWFKIQMCKDRFEG 592

Query: 485 LLRIDLLKEVYTPFLATVAMSKSHAD-STQGSSQITISSNARVSEDGSSPNQVSSADFVC 543
           LL+ID LKE+ TP L+  A+SKS+AD ST GSSQ+T+SS+ R+ +DGSSP Q+SS D VC
Sbjct: 593 LLKIDSLKEMNTPLLSN-AVSKSNADTSTNGSSQVTVSSSGRMVDDGSSPTQMSSRDVVC 651

Query: 544 DENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
           DENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Sbjct: 652 DENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 690

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084326|ref|XP_002307260.1| predicted protein [Populus trichocarpa] gi|222856709|gb|EEE94256.1| predicted protein [Populus trichocarpa]

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/582 (73%), Positives = 486/582 (83%), Gaps = 26/582 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDD  SPVA EW+ERRRFEIAGLMSSVLRAHL AYDPVF+MT
Sbjct: 210 YPEAYEEFKHVLLAFIYDKDDQNSPVANEWSERRRFEIAGLMSSVLRAHLQAYDPVFSMT 269

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FC  QG+ SPISDLT+RLLLEERDPPA PQES YEAPPFDEVDIQALAHA
Sbjct: 270 LRYLISIHKGFCIRQGISSPISDLTERLLLEERDPPAVPQESFYEAPPFDEVDIQALAHA 329

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRFA+GDLFQAFQNELC+M++DVSMLDELV EYCVYRGIVDSGL     
Sbjct: 330 VELTRQGAIDSLRFAKGDLFQAFQNELCRMKVDVSMLDELVHEYCVYRGIVDSGL----- 384

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            +T++ P+KV + E G CSSRN S E D + SK+SDGETSVSN  M+GSPE++ DV SIQ
Sbjct: 385 -KTLAEPLKVGQSELGYCSSRNYSFEGDNTNSKHSDGETSVSNAHMNGSPEDSVDVNSIQ 443

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCYN 304
           G DVELR+    T   EDCSTSGSHQ   S+VL R+R++ +GER+KRKRWR RQDD  Y 
Sbjct: 444 GTDVELRYACESTNCYEDCSTSGSHQAGISKVLQRNRNYTTGERSKRKRWRGRQDDEDY- 502

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQ---ENYEIVLGMKELAGKGMAAEAVEEINAM 361
                    K+++N++    ST +SREQQ   + YEIVLGMKELAG+GMAAE VEE+ A+
Sbjct: 503 ---------KQDVNAT----STNLSREQQSRDDKYEIVLGMKELAGRGMAAEVVEEVTAL 549

Query: 362 DADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLA 421
           D +FF+QN +LLFQLKQVEFLKLVS GDHS ALRVA +HLGP+A+  P+LLKPLKETLLA
Sbjct: 550 DPNFFLQNHILLFQLKQVEFLKLVSSGDHSSALRVASSHLGPIASRDPSLLKPLKETLLA 609

Query: 422 LLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDR 481
           LL PNED L KG PLH L+TSLQ AIGR+LG+EEPQLMK++RATLHTHNEWFKLQMCKDR
Sbjct: 610 LLWPNEDALGKGLPLHALSTSLQFAIGRKLGVEEPQLMKLMRATLHTHNEWFKLQMCKDR 669

Query: 482 FESLLRIDLLKEVYTPFLATVAMSKSHADS-TQGSSQITISSNARVSEDGSSPNQVSSAD 540
           FESLLRID LK+V TP ++  +MSKS+ADS T GSSQ+TISS+ RVSEDGSS  Q SS D
Sbjct: 670 FESLLRIDSLKDVNTPLISACSMSKSNADSCTHGSSQVTISSSTRVSEDGSSATQESSRD 729

Query: 541 FVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
            VCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Sbjct: 730 -VCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 770

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565128|ref|XP_002523556.1| conserved hypothetical protein [Ricinus communis] gi|223537118|gb|EEF38751.1| conserved hypothetical protein [Ricinus communis]

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/580 (73%), Positives = 481/580 (82%), Gaps = 25/580 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDD +SPVA EW+ERRRF+IAGLMSSVLRAHLHAYDPVF+MT
Sbjct: 128 YPEAYEEFKHVLLAFIYDKDDQSSPVANEWSERRRFDIAGLMSSVLRAHLHAYDPVFSMT 187

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCF +G+ SPISDLT+RLLLEERDPPA PQESLYEAPPFDEVDIQALAHA
Sbjct: 188 LRYLISIHKGFCFREGISSPISDLTERLLLEERDPPAVPQESLYEAPPFDEVDIQALAHA 247

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGAVDSLRFA+GDLFQAFQNELC+M+LDVSMLDELVREYCVYRGIVDSG+ TPS 
Sbjct: 248 VELTRQGAVDSLRFAKGDLFQAFQNELCRMKLDVSMLDELVREYCVYRGIVDSGVETPSE 307

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVIS-I 244
                 P+KV++ E G  SS NCSLE+D +  K+SDGETS SN +MDGSPENN  +++  
Sbjct: 308 ------PLKVNQTEPGYSSSMNCSLEVDHTTYKHSDGETSTSNALMDGSPENNARMMNRT 361

Query: 245 QGADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCY 303
           QG D ELR+    T + EDCSTSGSHQ   S+V+ R+++  +GER+KRKRWR RQDD  Y
Sbjct: 362 QGTDAELRYACETTINFEDCSTSGSHQTGISKVIQRNKNRATGERSKRKRWRGRQDDEDY 421

Query: 304 NPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDA 363
              +S  G N             I +RE  + YE+VLG+KELA  GMAAE VEE+NA D 
Sbjct: 422 ISGVSFNGSN-------------ISNRE--DKYELVLGIKELASSGMAAEVVEEVNAFDP 466

Query: 364 DFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALL 423
           +FFVQNP+LLFQLKQVEFLKLV  GDHS AL+VAC+HLGPLAAS P LLKPLKET+LALL
Sbjct: 467 NFFVQNPVLLFQLKQVEFLKLVDSGDHSSALKVACSHLGPLAASDPDLLKPLKETMLALL 526

Query: 424 QPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFE 483
           +PNED + KG PLH LATSLQVAIGRRLGIEEPQLMKI+RA LHTHNEWFKLQMCKDRFE
Sbjct: 527 RPNEDAIGKGLPLHALATSLQVAIGRRLGIEEPQLMKIMRAMLHTHNEWFKLQMCKDRFE 586

Query: 484 SLLRIDLLKEVYTPFLATVAMSKSHADS-TQGSSQITISSNARVSEDGSSPNQVSSADFV 542
           SLLRID LKEV  P L+   +SKS+ADS T GSSQ+T+SS+ R+SEDGSSP QVSS D V
Sbjct: 587 SLLRIDSLKEVNAPMLSACLISKSNADSCTHGSSQVTVSSSIRLSEDGSSPTQVSSRD-V 645

Query: 543 CDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
            DENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Sbjct: 646 HDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 685

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565624|ref|XP_003551039.1| PREDICTED: uncharacterized protein LOC100777538 [Glycine max]

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/591 (69%), Positives = 474/591 (80%), Gaps = 20/591 (3%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDD  SPVA EW+E RR ++AG MSS+LRAHL+AYDP+F+M 
Sbjct: 124 YPEAYEEFKHVLLAFIYDKDDKNSPVANEWSEHRRLDLAGFMSSMLRAHLNAYDPIFSMA 183

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIH+ +C  QG+ SPISDLT+RLLLEERDPPATPQ+ LYE PPFDEVDIQALAHA
Sbjct: 184 LRYLISIHRVYCLRQGITSPISDLTERLLLEERDPPATPQDILYEVPPFDEVDIQALAHA 243

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRF +GD+F AFQNELC+MRLD  +LD+LVREYCVYRGIVDS     SG
Sbjct: 244 VELTRQGAIDSLRFTKGDVFLAFQNELCRMRLDAPLLDQLVREYCVYRGIVDSA----SG 299

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q I   +K +  + G CSSR+CSLE+DC+ SK+SDGETSV+N  MDGSPENNTDV S++
Sbjct: 300 KQPIPETVKFNPQDPGYCSSRDCSLELDCNASKHSDGETSVTNAQMDGSPENNTDVTSMR 359

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCYN 304
             D E+R+       +EDCSTSGS Q E + VL RSR  G+GER+KRKRWR R DD  Y 
Sbjct: 360 RIDFEVRYASELASIHEDCSTSGSQQHEDASVLQRSRLPGNGERSKRKRWRGRYDDNSYM 419

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQ-------------QENYEIVLGMKELAGKGMA 351
           P  SL   +K+E + ST++ STI   +Q             ++ YEI+LGMKELA KGMA
Sbjct: 420 PNASLEENSKQEHSISTIV-STISKEKQGSEKLSVHDISNVEDRYEILLGMKELASKGMA 478

Query: 352 AEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPAL 411
           AEAVEE+NA+D +FF QN +LLFQLKQVEFLKLVS GD++ AL+VAC HLGPLAA  PAL
Sbjct: 479 AEAVEEVNAIDPNFFAQNSVLLFQLKQVEFLKLVSSGDYNTALKVACTHLGPLAACDPAL 538

Query: 412 LKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNE 471
           LKPLKETLLALL+PNED L    PLH LA SLQVA+GRRLG+EEPQLMKI+RATL+THNE
Sbjct: 539 LKPLKETLLALLRPNEDALGNALPLHALAASLQVAVGRRLGVEEPQLMKIMRATLYTHNE 598

Query: 472 WFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHADS-TQGSSQITISSNARVSEDG 530
           WFKLQMCKDRFE LLR+D LKE  TPFLA V+ SKS+ADS T GSSQ T+SS  R+SEDG
Sbjct: 599 WFKLQMCKDRFEGLLRLDSLKEANTPFLAPVSTSKSYADSCTNGSSQATVSSGTRMSEDG 658

Query: 531 SSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIF 581
           SSP Q SS D +CDE AILKVMEFLALPRADAIHLLAQYNGNAETVIQQIF
Sbjct: 659 SSPTQASSRDVICDEGAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIF 709

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514158|ref|XP_003525773.1| PREDICTED: uncharacterized protein LOC100794305 [Glycine max]

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/592 (68%), Positives = 477/592 (80%), Gaps = 20/592 (3%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKDD TSPVA EW+E+RR ++AG MSS+LRAHL+AYDP+F+M 
Sbjct: 119 YPEAYEEFKHVLLAFIYDKDDKTSPVANEWSEQRRLDLAGFMSSMLRAHLNAYDPIFSMA 178

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIH+ +C  QG+ SPISDLT+RLLLEERDP ATPQ+ LYE PPFDEVDIQALAHA
Sbjct: 179 LRYLISIHRVYCLRQGITSPISDLTERLLLEERDPSATPQDILYEVPPFDEVDIQALAHA 238

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRF +GD+  AFQNELC+MRLDV +LD+LVREYCVYRGIVDS     SG
Sbjct: 239 VELTRQGAIDSLRFTKGDVVLAFQNELCRMRLDVPLLDQLVREYCVYRGIVDSA----SG 294

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q I  P+K+++ + G CSSR+CSLE+DC+ SK+SDGETSV+N  MDGSPENN+DV S++
Sbjct: 295 KQPIPEPVKINQQDPGYCSSRDCSLELDCNASKHSDGETSVTNAQMDGSPENNSDVTSMR 354

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVL-RSRSHGSGERNKRKRWRERQDDFCYN 304
             D E+R+       +EDCSTSGS Q E + VL R R  G+GER+KRKRWR R D   Y 
Sbjct: 355 RIDFEVRYASELASIHEDCSTSGSQQHEDASVLQRCRLSGNGERSKRKRWRGRYDGNSYM 414

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQ-------------QENYEIVLGMKELAGKGMA 351
            + SL   +K+E +  T++ STI+  +Q             ++ YEI+LGMKELA KGMA
Sbjct: 415 SDASLEENSKQEHSIGTVV-STILKEKQGSEKLSVHDINNVEDRYEILLGMKELASKGMA 473

Query: 352 AEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPAL 411
           AEAVEE+NA+D++FF QN +LLFQLKQVEFLKLVS GD++ AL+VAC HLGPLAAS PAL
Sbjct: 474 AEAVEEVNAIDSNFFAQNSILLFQLKQVEFLKLVSSGDYNAALKVACTHLGPLAASDPAL 533

Query: 412 LKPLKETLLALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNE 471
           LKPLKETLLALL+PNED L    PLH LA SLQVA+GRRLG+EEPQLMKI+RATL+THNE
Sbjct: 534 LKPLKETLLALLRPNEDALGNALPLHALAASLQVAVGRRLGVEEPQLMKIMRATLYTHNE 593

Query: 472 WFKLQMCKDRFESLLRIDLLKEVYTPFLATVAMSKSHADS-TQGSSQITISSNARVSEDG 530
           WFKLQM KDRFE LLR+D LKE  TPFLA V  SKS+ADS T GSSQ T+SS  R+SEDG
Sbjct: 594 WFKLQMWKDRFEGLLRLDSLKEANTPFLAPVTTSKSYADSCTNGSSQATVSSGTRMSEDG 653

Query: 531 SSPNQVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
           SSP Q SS D +CDE AILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA
Sbjct: 654 SSPTQASSRDVICDEGAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 705

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448510|ref|XP_004142009.1| PREDICTED: uncharacterized protein LOC101218546 [Cucumis sativus]

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/580 (68%), Positives = 467/580 (80%), Gaps = 26/580 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKD+ TSPV  EW ERRRF+IAGLMSSVLRAH+ AYDPVF+MT
Sbjct: 125 YPEAYEEFKHVLLAFIYDKDNQTSPVTYEWCERRRFDIAGLMSSVLRAHMQAYDPVFSMT 184

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCF +GV SPISDLT+RLLL+ERDPPATP+ESLYEAPPFDEVDIQALAHA
Sbjct: 185 LRYLISIHKGFCFREGVSSPISDLTERLLLDERDPPATPKESLYEAPPFDEVDIQALAHA 244

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRF +GDLF AFQNELC+M+LD+S+LDELVREYC+YRGIVDSG+     
Sbjct: 245 VELTRQGAIDSLRFTKGDLFHAFQNELCRMKLDLSVLDELVREYCIYRGIVDSGM----- 299

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q +S  +K ++ E   C SRNCS E+D + SK SDGE SVSN+ +D SPEN  DV S Q
Sbjct: 300 -QNLSSSLKANQSEQEYC-SRNCSFEVDYTTSKLSDGEISVSNSRVDSSPENTADVTSSQ 357

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVLR-SRSHGSGERNKRKRWRERQDDFCYN 304
           G D+ELR+   PT + EDCSTS S    +SR+L+ +++ G  ER+KRKRWR R DD   +
Sbjct: 358 GTDIELRYASEPTSNREDCSTSDSIHVGNSRMLQVNKNRGIVERSKRKRWRGRLDDTELH 417

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDAD 364
            ++S  GC              I S  +++ YEIVLG++ELA K  AAE VEEINA+D +
Sbjct: 418 -DVSYSGC--------------IESTGKEDKYEIVLGIRELASKRFAAEVVEEINAVDPN 462

Query: 365 FFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQ 424
           FF QNP+LLFQLKQVEFLKLVS GD+S AL+VAC HLGPLAA+ P+LLK LKETLLALL 
Sbjct: 463 FFAQNPILLFQLKQVEFLKLVSSGDYSSALKVACTHLGPLAANDPSLLKQLKETLLALLL 522

Query: 425 PNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFES 484
           P ED+L KGFP++ LA SLQVA+GRRLGIEEPQLMK++RATLH+H+EWFKLQMCKDRFE 
Sbjct: 523 PKEDILGKGFPINALANSLQVAVGRRLGIEEPQLMKLMRATLHSHSEWFKLQMCKDRFEG 582

Query: 485 LLRIDLLKEVYTPFLATVA-MSKSHADS-TQGSSQITISSNARVSEDGSSPNQVSSADFV 542
           LL+IDLLKEV  P L+T A + KS++DS + GSSQ+T SS AR SEDGSSP Q SS D  
Sbjct: 583 LLKIDLLKEVNPPLLSTTAGLLKSNSDSCSHGSSQVTKSSGARTSEDGSSPTQASSRD-A 641

Query: 543 CDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
           CDENAILKVMEFLALPRADAIHLLAQYNGNAE VIQQIFA
Sbjct: 642 CDENAILKVMEFLALPRADAIHLLAQYNGNAEMVIQQIFA 681

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531491|ref|XP_004172719.1| PREDICTED: uncharacterized LOC101218546, partial [Cucumis sativus]

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/499 (67%), Positives = 399/499 (79%), Gaps = 23/499 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL FIYDKD+ TSPV  EW ERRRF+IAGLMSSVLRAH+ AYDPVF+MT
Sbjct: 125 YPEAYEEFKHVLLAFIYDKDNQTSPVTYEWCERRRFDIAGLMSSVLRAHMQAYDPVFSMT 184

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCF +GV SPISDLT+RLLL+ERDPPATP+ESLYEAPPFDEVDIQALAHA
Sbjct: 185 LRYLISIHKGFCFREGVSSPISDLTERLLLDERDPPATPKESLYEAPPFDEVDIQALAHA 244

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGA+DSLRF +GDLF AFQNELC+M+LD+S+LDELVREYC+YRGIVDSG+     
Sbjct: 245 VELTRQGAIDSLRFTKGDLFHAFQNELCRMKLDLSVLDELVREYCIYRGIVDSGM----- 299

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q +S  +K ++ E   C SRNCS E+D + SK SDGE SVSN+ +D SPEN  DV S Q
Sbjct: 300 -QNLSSSLKANQSEQEYC-SRNCSFEVDYTTSKLSDGEISVSNSRVDSSPENTADVTSSQ 357

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSRVLR-SRSHGSGERNKRKRWRERQDDFCYN 304
           G D+ELR+   PT + EDCSTS S    +SR+L+ +++ G  ER+KRKRWR R DD   +
Sbjct: 358 GTDIELRYASEPTSNREDCSTSDSIHVGNSRMLQVNKNRGIVERSKRKRWRGRLDDTELH 417

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDAD 364
            ++S  GC              I S  +++ YEIVLG++ELA K  AAE VEEINA+D +
Sbjct: 418 -DVSYSGC--------------IESTGKEDKYEIVLGIRELASKRFAAEVVEEINAVDPN 462

Query: 365 FFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQ 424
           FF QNP+LLFQLKQVEFLKLVS GD+S AL+VAC HLGPLAA+ P+LLK LKETLLALL 
Sbjct: 463 FFAQNPILLFQLKQVEFLKLVSSGDYSSALKVACTHLGPLAANDPSLLKQLKETLLALLL 522

Query: 425 PNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFES 484
           P ED+L KGFP++ LA SLQVA+GRRLGIEEPQLMK++RATLH+H+EWFKLQMCKDRFE 
Sbjct: 523 PKEDILGKGFPINALANSLQVAVGRRLGIEEPQLMKLMRATLHSHSEWFKLQMCKDRFEG 582

Query: 485 LLRIDLLKEVYTPFLATVA 503
           LL+IDLLKEV  P L+T A
Sbjct: 583 LLKIDLLKEVNPPLLSTTA 601

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737502|dbj|BAF00693.1| hypothetical protein [Arabidopsis thaliana]

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/584 (60%), Positives = 429/584 (73%), Gaps = 26/584 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL  IYDKDD TSPVA EWAE+RR+E+AGLMSSVLRA L AYDPVF+MT
Sbjct: 168 YPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASLQAYDPVFSMT 227

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCFHQG+ S +SDLT RLLLEERD PATP ES+YE PPFDEVDIQALAHA
Sbjct: 228 LRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFDEVDIQALAHA 287

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGAVDS++FA+GDLFQAFQNELC+MRLDVS+LDELV+EYC+YRGIVDS +     
Sbjct: 288 VELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGIVDSEM----- 342

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q I+IP K ++ E G   SR+CS E+D + S++SD E   + +++DGS   +T++   +
Sbjct: 343 -QMITIPAKRNQSEVGRSLSRDCSSEIDLNTSQHSDIENYSNKSMLDGSLTYDTEMSCEE 401

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSR-VLRSRSHGSGERNKRKRWRERQDDFCYN 304
           G DV  R+   PT   EDCSTS S+Q E++R +LR RSH + E NKRKRW  R  +    
Sbjct: 402 GGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKRWCGRTAEMDCL 461

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDAD 364
           P IS                S   +   ++ YEIVL +KEL  +GMAAEA  EI+ MD D
Sbjct: 462 PRISFAN-------------SESGTNPIEDKYEIVLALKELVSRGMAAEAFSEISTMDPD 508

Query: 365 FFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQ 424
           FF QNP LLF LKQVEFLKLVS GDH+GAL+VAC HLGPLAA+  +LLK LKETLL LLQ
Sbjct: 509 FFTQNPGLLFHLKQVEFLKLVSAGDHNGALKVACFHLGPLAANDQSLLKTLKETLLVLLQ 568

Query: 425 PNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFES 484
           P+     K  PL+ LA +LQV++G RLGIEEP+LMKI++ATLHTH EWFKLQMCKDRF +
Sbjct: 569 PDGTAPGKDLPLNDLANTLQVSVGNRLGIEEPKLMKIIKATLHTHTEWFKLQMCKDRFNN 628

Query: 485 LLRIDLLKEVYTPFLATV-AMSKSHADSTQGSSQITISSNARVSEDGSSPN-----QVSS 538
           LL+ID LKEV T  +  + + SK  +++   S   T SS+   SEDG S +     Q   
Sbjct: 629 LLKIDSLKEVNTDLIGAIKSKSKKDSNTNLSSQVTTTSSSTMTSEDGGSSSLMMMTQTLP 688

Query: 539 ADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
            + + +E+AILKVMEFLA+PR+DAI LL+QYNG+AE VIQQ+F 
Sbjct: 689 REALWEESAILKVMEFLAMPRSDAIQLLSQYNGDAEAVIQQLFG 732

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30698257|ref|NP_201482.2| uncharacterized protein [Arabidopsis thaliana] gi|332010882|gb|AED98265.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/584 (59%), Positives = 428/584 (73%), Gaps = 26/584 (4%)

Query: 6   FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
           + EAYEEFKHVLL  IYDKDD TSPVA EWAE+RR+E+AGLMSSVLRA L AYDPVF+MT
Sbjct: 186 YPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASLQAYDPVFSMT 245

Query: 66  LRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQALAHA 125
           LRYLISIHK FCFHQG+ S +SDLT RLLLEERD PATP ES+YE PPFDEVDIQALAHA
Sbjct: 246 LRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFDEVDIQALAHA 305

Query: 126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
           V++TRQGAVDS++FA+GDLFQAFQNELC+MRLDVS+LDELV+EYC+YRGIVDS +     
Sbjct: 306 VELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGIVDSEM----- 360

Query: 186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
            Q I+IP K ++ E G   SR+CS E+D + S++SD E   + +++DGS   +T++   +
Sbjct: 361 -QMITIPAKRNQSEVGRSLSRDCSSEIDLNTSQHSDIENYSNKSMLDGSLTYDTEMSCEE 419

Query: 246 GADVELRFTGGPTGSNEDCSTSGSHQPESSR-VLRSRSHGSGERNKRKRWRERQDDFCYN 304
           G DV  R+   PT   EDCSTS S+Q E++R +LR RSH + E NKRKRW  R  +    
Sbjct: 420 GGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKRWCGRTAEMDCL 479

Query: 305 PEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINAMDAD 364
           P IS                S   +   ++ YEI L +KEL  +GMAAEA  EI+ MD D
Sbjct: 480 PRISFAN-------------SESGTNPIEDKYEIALALKELVSRGMAAEAFSEISTMDPD 526

Query: 365 FFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQ 424
           FF QNP LLF LKQVEFLKLVS GDH+GAL+VAC HLGPLAA+  +LLK LKETLL LLQ
Sbjct: 527 FFTQNPGLLFHLKQVEFLKLVSAGDHNGALKVACFHLGPLAANDQSLLKTLKETLLVLLQ 586

Query: 425 PNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKDRFES 484
           P+     K  PL+ LA +LQV++G RLGIEEP+LMKI++ATLHTH EWFKLQMCKDRF +
Sbjct: 587 PDGTAPGKDLPLNDLANTLQVSVGNRLGIEEPKLMKIIKATLHTHTEWFKLQMCKDRFNN 646

Query: 485 LLRIDLLKEVYTPFLATV-AMSKSHADSTQGSSQITISSNARVSEDGSSPN-----QVSS 538
           LL+ID LKEV T  +  + + SK  +++   S   T SS+   SEDG S +     Q   
Sbjct: 647 LLKIDSLKEVNTDLIGAIKSKSKKDSNTNLSSQVTTTSSSTMTSEDGGSSSLMMMTQTLP 706

Query: 539 ADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA 582
            + + +E+AILKVMEFLA+PR+DAI LL+QYNG+AE VIQQ+F 
Sbjct: 707 REALWEESAILKVMEFLAMPRSDAIQLLSQYNGDAEAVIQQLFG 750

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	582
TAIR|locus:2175014	750	AT5G66810 "AT5G66810" [Arabido	0.510	0.396	0.605	4e-90

TAIR|locus:2175014 AT5G66810 "AT5G66810" [Arabidopsis thaliana (taxid:3702)]

 Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
 Identities = 184/304 (60%), Positives = 225/304 (74%)

Query:     6 FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
             + EAYEEFKHVLL  IYDKDD TSPVA EWAE+RR+E+AGLMSSVLRA L AYDPVF+MT
Sbjct:   186 YPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASLQAYDPVFSMT 245

Query:    66 LRYLISIHKEFCFHQGVPSPISXXXXXXXXXXXXPPATPQESLYEAPPFDEVDIQALAHA 125
             LRYLISIHK FCFHQG+ S +S             PATP ES+YE PPFDEVDIQALAHA
Sbjct:   246 LRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFDEVDIQALAHA 305

Query:   126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
             V++TRQGAVDS++FA+GDLFQAFQNELC+MRLDVS+LDELV+EYC+YRGIVDS +     
Sbjct:   306 VELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGIVDSEM----- 360

Query:   186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
              Q I+IP K ++ E G   SR+CS E+D + S++SD E   + +++DGS   +T++   +
Sbjct:   361 -QMITIPAKRNQSEVGRSLSRDCSSEIDLNTSQHSDIENYSNKSMLDGSLTYDTEMSCEE 419

Query:   246 GADVELRFTGGPTGSNEDCSTSGSHQPESSR-VLRSRSHGSGERNKRKRWRERQDDFCYN 304
             G DV  R+   PT   EDCSTS S+Q E++R +LR RSH + E NKRKRW  R  +    
Sbjct:   420 GGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKRWCGRTAEMDCL 479

Query:   305 PEIS 308
             P IS
Sbjct:   480 PRIS 483

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019470001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (674 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	582
KOG2659	228	consensus LisH motif-containing protein [Cytoskele	100.0
PF10607	145	CLTH: CTLH/CRA C-terminal to LisH motif domain; In	99.82
smart00757	99	CRA CT11-RanBPM. protein-protein interaction domai	99.13
smart00668	58	CTLH C-terminal to LisH motif. Alpha-helical motif	98.88
KOG0396	389	consensus Uncharacterized conserved protein [Funct	98.71
KOG2659	228	consensus LisH motif-containing protein [Cytoskele	98.42
KOG2817	394	consensus Predicted E3 ubiquitin ligase [Posttrans	96.68
PRK06369	115	nac nascent polypeptide-associated complex protein	92.9
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	91.79
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	90.7
PF10607	145	CLTH: CTLH/CRA C-terminal to LisH motif domain; In	90.23
smart00757	99	CRA CT11-RanBPM. protein-protein interaction domai	85.38
PF00627	37	UBA: UBA/TS-N domain; InterPro: IPR000449 UBA doma	84.29

>KOG2659 consensus LisH motif-containing protein [Cytoskeleton]

Probab=100.00  E-value=8.8e-35  Score=283.97  Aligned_cols=146  Identities=22%  Similarity=0.313  Sum_probs=133.2

Q ss_pred             hhhhhhHHHHHHHHHHHhcCCHHHHHHHHhccCCCccccCcccchhhhHHHHHHHHhcCChhHHHHHHHhhcCcccccCc
Q 008001          330 REQQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHP  409 (582)
Q Consensus       330 ~~~dDsIE~R~~IReAIq~G~IqeAIelVNeLdPeILDtNP~L~FhLQQqqLIELIR~GdieeALeFAq~~LaPrae~nP  409 (582)
                      .-+.++++.|.+||++|..|+|++||+++|+|+|+|||+|++||||||||+||||||+|.+++||+|||++|+|.|++|+
T Consensus        59 ~~d~~~~~eR~~Ir~~I~~G~Ie~Aie~in~l~PeiLd~n~~l~F~Lq~q~lIEliR~~~~eeal~F~q~~LA~~a~e~~  138 (228)
T KOG2659|consen   59 SIDLDSMDERLQIRRAIEEGQIEEAIEKVNQLNPEILDTNRELFFHLQQLHLIELIREGKTEEALEFAQTKLAPFAEENP  138 (228)
T ss_pred             cCchhhHhHHHHHHHHHHhccHHHHHHHHHHhChHHHccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHccccccccH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHhcCCCCc--cccC---CCChHHHHHHHHHHHHhhcCC-CCchHHHHHHHHHHhhhhhhhh
Q 008001          410 ALLKPLKETLLALLQPNED--VLVK---GFPLHTLATSLQVAIGRRLGI-EEPQLMKILRATLHTHNEWFKL  475 (582)
Q Consensus       410 ~fL~eLErTMALLAfP~e~--l~~~---~l~r~~VAseLNaAIL~~~g~-~EPKL~~LLKLlLWAQ~Ew~Kl  475 (582)
                      +++.+||+||++|+||.++  +...   ...|+++|++||.|||++++. .+|+|++|+|++.|+|++--+-
T Consensus       139 ~~~~elE~~l~lLvf~~~~~sp~~~l~~~s~R~kvA~~vN~aiL~~~~~~~~~~l~~llk~~~~~~~~~~~~  210 (228)
T KOG2659|consen  139 KKMEELERTLALLVFELSQESPSAELLSQSLRQKVASEVNSAILASQEHESEPKLPFLLKLISWAQEELDRE  210 (228)
T ss_pred             HHHHHHHHHHHHHHcCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhHh
Confidence            9999999999999997643  1111   126899999999999999987 4999999999999999875443

>PF10607 CLTH: CTLH/CRA C-terminal to LisH motif domain; InterPro: IPR019589 This entry represents the CRA (or CT11-RanBPM) domain, which is a protein-protein interaction domain present in crown eukaryotes (plants, animals, fungi) and which is found in Ran-binding proteins such as Ran-binding protein 9 (RanBP9 or RanBPM) and RanBP10

Probab=99.82  E-value=3.1e-20  Score=163.85  Aligned_cols=134  Identities=25%  Similarity=0.332  Sum_probs=120.4

Q ss_pred             hHHHHHHHHHHHhcCCHHHHHHHHhccCCCccccCcccchhhhHHHHHHHHhcCChhHHHHHHHhhcCcccccCccchhh
Q 008001          335 NYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKP  414 (582)
Q Consensus       335 sIE~R~~IReAIq~G~IqeAIelVNeLdPeILDtNP~L~FhLQQqqLIELIR~GdieeALeFAq~~LaPrae~nP~fL~e  414 (582)
                      +++.|.+|+++|.+|++++||+.+|+..|++++.|+.|+|.|+.|+|||||++|++.+||+||+++|.|...   .+.++
T Consensus         1 ~~~~r~~I~~~I~~g~i~~Ai~w~~~~~~~l~~~~~~L~f~L~~q~fiell~~~~~~~Ai~y~r~~l~~~~~---~~~~~   77 (145)
T PF10607_consen    1 SFKERKKIRQAILNGDIDPAIEWLNENFPELLKRNSSLEFELRCQQFIELLREGDIMEAIEYARKHLSPFND---EFLEE   77 (145)
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHcCHHHHhcCCchhHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhHH---HHHHH
Confidence            478899999999999999999999999999999999999999999999999999999999999999976665   78999


Q ss_pred             HHHHHHHhcCCCCcc-----cc---CCCChHHHHHHHHHHHHhhcCC-CCchHHHHHHHHHHhhhh
Q 008001          415 LKETLLALLQPNEDV-----LV---KGFPLHTLATSLQVAIGRRLGI-EEPQLMKILRATLHTHNE  471 (582)
Q Consensus       415 LErTMALLAfP~e~l-----~~---~~l~r~~VAseLNaAIL~~~g~-~EPKL~~LLKLlLWAQ~E  471 (582)
                      ++++|+||+++....     ..   ....+.+||..+|.+|+...|. .+|.|..+++...|+...
T Consensus        78 l~~~~~lL~~~~~~~~~~s~~~~l~~~~~~~~la~~~~~~~l~~~~~~~~s~L~~~~~~g~~~l~~  143 (145)
T PF10607_consen   78 LKKLMSLLAYPDPEEPLPSPYKELLSPERREELAEEFNSAILKSYGLPKESPLEVILKAGLSALKT  143 (145)
T ss_pred             HHHHHHHHHcCCcccccchHHHHHhChHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhhh
Confidence            999999999866432     11   1126789999999999999987 689999999999999864

RanBPM is a scaffolding protein important in regulating cellular function in both the immune system and the nervous system, and may act as an adapter protein to couple membrane receptors to intracellular signaling pathways. This domain is at the C terminus of the proteins and is the binding domain for the CRA motif, which is comprised of approximately 100 amino acids at the C-terminal of RanBPM. It was found to be important for the interaction of RanBPM with fragile X mental retardation protein (FMRP), but its functional significance has yet to be determined [].

>smart00757 CRA CT11-RanBPM

Probab=99.13  E-value=1.1e-10  Score=97.00  Aligned_cols=85  Identities=31%  Similarity=0.326  Sum_probs=72.3

Q ss_pred             CChhHHHHHHHhhcCcccccCccchhhHHHHHHHhcCCCC-c--ccc---CCCChHHHHHHHHHHHHhhc-CC-CCchHH
Q 008001          388 GDHSGALRVACAHLGPLAASHPALLKPLKETLLALLQPNE-D--VLV---KGFPLHTLATSLQVAIGRRL-GI-EEPQLM  459 (582)
Q Consensus       388 GdieeALeFAq~~LaPrae~nP~fL~eLErTMALLAfP~e-~--l~~---~~l~r~~VAseLNaAIL~~~-g~-~EPKL~  459 (582)
                      +++.+||.|||++|+|.+.+++.++++||++|+||||+.. .  +..   ....+..||.++|.+|+... |. .+|.|.
T Consensus         1 ~~~~eAi~yar~~l~~~~~~~~~~~~el~~~m~llaf~~~~~~sp~~~ll~~~~~~~la~~~n~~~l~~~~~~~~~s~L~   80 (99)
T smart00757        1 GKIEEALAYARELLAPFAKEHEKFLKELEKTMALLAYPDPTEPSPYKELLSPSQREKLAEELNSAILELLHGKSSESPLE   80 (99)
T ss_pred             CcHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHHHhcCCCCCCccHHHHCCHHHHHHHHHHHHHHHHHHccCCCCCChHH
Confidence            4789999999999999999999999999999999999764 2  111   11167899999999999998 76 589999


Q ss_pred             HHHHHHHHhhhhh
Q 008001          460 KILRATLHTHNEW  472 (582)
Q Consensus       460 ~LLKLlLWAQ~Ew  472 (582)
                      .++|..+|++..-
T Consensus        81 ~~~~~~~~~~~~l   93 (99)
T smart00757       81 ILLSAGLAALKTL   93 (99)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998754

protein-protein interaction domain present in crown eukaryotes (plants, animals, fungi)

>smart00668 CTLH C-terminal to LisH motif

Probab=98.88  E-value=2.4e-09  Score=81.64  Aligned_cols=56  Identities=29%  Similarity=0.429  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHhccCCCccccCcccchhhhHHHHHHHHhcCChh
Q 008001          336 YEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHS  391 (582)
Q Consensus       336 IE~R~~IReAIq~G~IqeAIelVNeLdPeILDtNP~L~FhLQQqqLIELIR~Gdie  391 (582)
                      +..|..|+++|..|++++||+.++.++|.++..++.|+|.|++|+|||||+.|++.
T Consensus         2 ~~~~~~i~~~i~~g~~~~a~~~~~~~~~~l~~~~~~l~f~L~~q~~lell~~~~~~   57 (58)
T smart00668        2 FDERKRIRELILKGDWDEALEWLSSLKPPLLERNSKLEFELRKQKFLELVRQGKLE   57 (58)
T ss_pred             hHHHHHHHHHHHcCCHHHHHHHHHHcCHHHhccCCCchhHHHHHHHHHHHHcCCcC
Confidence            46789999999999999999999999999999999999999999999999998764

Alpha-helical motif of unknown function.

>KOG0396 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.71  E-value=7.8e-08  Score=100.96  Aligned_cols=137  Identities=23%  Similarity=0.274  Sum_probs=106.6

Q ss_pred             hhhhHHHHHHHHHHHhcCCHHHHHHHHhccCCCccccCcccchhhhHHHHHHHHhcCChhHHHHHHHhhcCcccccCccc
Q 008001          332 QQENYEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPAL  411 (582)
Q Consensus       332 ~dDsIE~R~~IReAIq~G~IqeAIelVNeLdPeILDtNP~L~FhLQQqqLIELIR~GdieeALeFAq~~LaPrae~nP~f  411 (582)
                      |-|-++.-..|++++..|.++.|+.-.++=.-++=..+-.|=|++.+|+|||||+.+++.+|++||+.|++|.+.++   
T Consensus       149 D~Dv~~~~~~I~~sll~~~l~~~Lswc~ehk~~LkK~~S~lEf~lRlQefIELi~~~~~~~Ai~~akk~f~~~~~~~---  225 (389)
T KOG0396|consen  149 DSDVYKRAYGIRDSLLAGELEPALSWCKEHKVELKKEESSLEFQLRLQEFIELIKVDNYDKAIAFAKKHFAPWAKSH---  225 (389)
T ss_pred             hHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhh---
Confidence            46778888999999999999999999999888888999999999999999999999999999999999999999966   


Q ss_pred             hhhHHHHHHHhcCCCCccccCC--C----ChHHHHHHHHHHHHhhcCC-CCchHHHHHHHHHHhhhh
Q 008001          412 LKPLKETLLALLQPNEDVLVKG--F----PLHTLATSLQVAIGRRLGI-EEPQLMKILRATLHTHNE  471 (582)
Q Consensus       412 L~eLErTMALLAfP~e~l~~~~--l----~r~~VAseLNaAIL~~~g~-~EPKL~~LLKLlLWAQ~E  471 (582)
                      .++|+.+|++||||...-.++-  +    +.+.+++---.--.+--|+ -.|.|-.++-+=|-+++-
T Consensus       226 ~~~Lk~a~g~laF~~~t~~sky~~l~~~~rw~~l~~lF~s~a~~l~~i~~~~~L~~~l~~GLsalKT  292 (389)
T KOG0396|consen  226 KSDLKLAMGLLAFPKYTSSSKYLNLLTADRWSVLADLFLSEALKLFGIPINPALTIYLQAGLSALKT  292 (389)
T ss_pred             HHHHHHHHHhhcCccccCcccccCcccHHHHHHHHHHhhHHHHHHhCCCCCcHHHHHHHhhhhhccc
Confidence            5899999999999885533321  2    2222332111111222243 368888887776666644

>KOG2659 consensus LisH motif-containing protein [Cytoskeleton]

Probab=98.42  E-value=3.9e-07  Score=90.76  Aligned_cols=87  Identities=16%  Similarity=0.117  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHhhhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHhhhhhcccCCCCCc
Q 008001            7 KEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMTLRYLISIHKEFCFHQGVPSPI   86 (582)
Q Consensus         7 peayeefk~vll~~iydkdd~~spva~ews~~rR~~lA~~~ss~lra~l~a~dP~~Sm~lRyLisiH~~~c~~~G~~spi   86 (582)
                      |++|+||+|+|..|+|| +.|.||+++.|+...|..+|+.|.+.|.++.+.+      ..++|++||      ++++.--
T Consensus       138 ~~~~~elE~~l~lLvf~-~~~~sp~~~l~~~s~R~kvA~~vN~aiL~~~~~~------~~~~l~~ll------k~~~~~~  204 (228)
T KOG2659|consen  138 PKKMEELERTLALLVFE-LSQESPSAELLSQSLRQKVASEVNSAILASQEHE------SEPKLPFLL------KLISWAQ  204 (228)
T ss_pred             HHHHHHHHHHHHHHHcC-CcccCcHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccchHHHHH------HHHHHHH
Confidence            48999999999999999 9999999999999999999999999999999997      667778877      5565677


Q ss_pred             cchhhhhcccCCCCCCCCcc
Q 008001           87 SDLTDRLLLEERDPPATPQE  106 (582)
Q Consensus        87 sdL~~rlL~~eRDPp~~p~e  106 (582)
                      ++++.+...+.++-+.++-.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~  224 (228)
T KOG2659|consen  205 EELDREKFSEPHFKDLTKIK  224 (228)
T ss_pred             HHHhHhhccccccCCccccc
Confidence            78989999888887777644

>KOG2817 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=96.68  E-value=0.003  Score=67.62  Aligned_cols=86  Identities=24%  Similarity=0.346  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHhcCCHHHHHHHHhccCCCccccCcccchhhhHHHHHHHHhcCChh--HHHHHHHhhcCcccccCccchh
Q 008001          336 YEIVLGMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHS--GALRVACAHLGPLAASHPALLK  413 (582)
Q Consensus       336 IE~R~~IReAIq~G~IqeAIelVNeLdPeILDtNP~L~FhLQQqqLIELIR~Gdie--eALeFAq~~LaPrae~nP~fL~  413 (582)
                      .-.-.+|-++++.||+.-|++-+-.=-=.+.+.|-.|=|-|..++|+.+|+.|..+  +||.+|++|.+|.+..+   ++
T Consensus       156 F~el~~Iv~~lke~Dl~~aLeWa~~~~~~L~~~~s~LE~~Lh~l~fl~l~~~g~~~~~eAl~Yar~~~~~F~~~~---~~  232 (394)
T KOG2817|consen  156 FVELNQIVEALKERDLEPALEWAESNRQKLKEKSSSLEFKLHSLHFLSLIRGGKSDQREALRYARTHFAPFVADH---LR  232 (394)
T ss_pred             HHHHHHHHHHHHhccchhHHHHHHHhhhhhccccccHHHHHHHHHHHHHHhcCCcCcHHHHHHHHHhcCccccch---HH
Confidence            34557899999999999999987766666778899999999999999999999999  99999999999999887   89


Q ss_pred             hHHHHHHHhcC
Q 008001          414 PLKETLLALLQ  424 (582)
Q Consensus       414 eLErTMALLAf  424 (582)
                      |++..|.+|.+
T Consensus       233 eIQklm~sl~~  243 (394)
T KOG2817|consen  233 EIQKLMGSLLY  243 (394)
T ss_pred             HHHHHHHHHHH
Confidence            99999998775

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=92.90  E-value=0.13  Score=47.41  Aligned_cols=38  Identities=29%  Similarity=0.351  Sum_probs=36.3

Q ss_pred             CCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          112 PPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       112 ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      ..|++.||.-++.-...||..|+.+|+-++||+.+|..
T Consensus        73 ~~i~~edI~lv~~q~gvs~~~A~~AL~~~~gDl~~AI~  110 (115)
T PRK06369         73 VEIPEEDIELVAEQTGVSEEEARKALEEANGDLAEAIL  110 (115)
T ss_pred             CCCCHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHH
Confidence            57999999999999999999999999999999999975

>TIGR00264 alpha-NAC-related protein

Probab=91.79  E-value=0.19  Score=46.53  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=35.4

Q ss_pred             CCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          113 PFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       113 pF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      .|++.||.-++.-.+.||..|+.+|+-++||+..|.-
T Consensus        76 ~i~~eDI~lV~eq~gvs~e~A~~AL~~~~gDl~~AI~  112 (116)
T TIGR00264        76 EITEDDIELVMKQCNVSKEEARRALEECGGDLAEAIM  112 (116)
T ss_pred             CCCHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHH
Confidence            5999999999999999999999999999999999964

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=90.70  E-value=0.4  Score=44.82  Aligned_cols=48  Identities=27%  Similarity=0.423  Sum_probs=39.6

Q ss_pred             CCCCcccccCCCCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHH
Q 008001          101 PATPQESLYEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAF  148 (582)
Q Consensus       101 p~~p~e~~~e~ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Af  148 (582)
                      |..|.|..-..=.|+|.||-=+++-+.-+|..|+.+|+-++|||.+|.
T Consensus        70 ~~~~ee~~~d~~~i~eeDIkLV~eQa~VsreeA~kAL~e~~GDlaeAI  117 (122)
T COG1308          70 VKKPEEKTVDESDISEEDIKLVMEQAGVSREEAIKALEEAGGDLAEAI  117 (122)
T ss_pred             cccchhcccccCCCCHHHHHHHHHHhCCCHHHHHHHHHHcCCcHHHHH
Confidence            444444333333599999999999999999999999999999999996

>PF10607 CLTH: CTLH/CRA C-terminal to LisH motif domain; InterPro: IPR019589 This entry represents the CRA (or CT11-RanBPM) domain, which is a protein-protein interaction domain present in crown eukaryotes (plants, animals, fungi) and which is found in Ran-binding proteins such as Ran-binding protein 9 (RanBP9 or RanBPM) and RanBP10

Probab=90.23  E-value=1.4  Score=39.36  Aligned_cols=66  Identities=21%  Similarity=0.229  Sum_probs=57.1

Q ss_pred             HHHHHHHHHhhhhccCCCC--CChhhHHHHHHHHHHHHHHHHHHHHHhhccc-CchhHHHHHHHHHHhh
Q 008001            9 AYEEFKHVLLTFIYDKDDP--TSPVAIEWAERRRFEIAGLMSSVLRAHLHAY-DPVFAMTLRYLISIHK   74 (582)
Q Consensus         9 ayeefk~vll~~iydkdd~--~spva~ews~~rR~~lA~~~ss~lra~l~a~-dP~~Sm~lRyLisiH~   74 (582)
                      -.++++.++-+++|.+...  .||++.-.+..||.++|..+.+.+-.+.+.- +|-|...++..++..+
T Consensus        74 ~~~~l~~~~~lL~~~~~~~~~~s~~~~l~~~~~~~~la~~~~~~~l~~~~~~~~s~L~~~~~~g~~~l~  142 (145)
T PF10607_consen   74 FLEELKKLMSLLAYPDPEEPLPSPYKELLSPERREELAEEFNSAILKSYGLPKESPLEVILKAGLSALK  142 (145)
T ss_pred             HHHHHHHHHHHHHcCCcccccchHHHHHhChHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhh
Confidence            5789999999999999887  8999999999999999999999888888765 4778888887777654

RanBPM is a scaffolding protein important in regulating cellular function in both the immune system and the nervous system, and may act as an adapter protein to couple membrane receptors to intracellular signaling pathways. This domain is at the C terminus of the proteins and is the binding domain for the CRA motif, which is comprised of approximately 100 amino acids at the C-terminal of RanBPM. It was found to be important for the interaction of RanBPM with fragile X mental retardation protein (FMRP), but its functional significance has yet to be determined [].

>smart00757 CRA CT11-RanBPM

Probab=85.38  E-value=4.6  Score=33.72  Aligned_cols=69  Identities=13%  Similarity=0.157  Sum_probs=53.0

Q ss_pred             cccHHHHHHHHHHHhhhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh-ccc-CchhHHHHHHHHHH
Q 008001            4 SMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHL-HAY-DPVFAMTLRYLISI   72 (582)
Q Consensus         4 ~aypeayeefk~vll~~iydkdd~~spva~ews~~rR~~lA~~~ss~lra~l-~a~-dP~~Sm~lRyLisi   72 (582)
                      +.+|.-..|+++++-.++|....+.||+..=++..||..+|..+-+.+=.+. +.. .|.|...++..+..
T Consensus        19 ~~~~~~~~el~~~m~llaf~~~~~~sp~~~ll~~~~~~~la~~~n~~~l~~~~~~~~~s~L~~~~~~~~~~   89 (99)
T smart00757       19 KEHEKFLKELEKTMALLAYPDPTEPSPYKELLSPSQREKLAEELNSAILELLHGKSSESPLEILLSAGLAA   89 (99)
T ss_pred             ccCHHHHHHHHHHHHHHhcCCCCCCccHHHHCCHHHHHHHHHHHHHHHHHHccCCCCCChHHHHHHHHHHH
Confidence            3445557899999999999877689999999999999999999986555555 332 36788888876653

protein-protein interaction domain present in crown eukaryotes (plants, animals, fungi)

>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []

Probab=84.29  E-value=1.4  Score=32.21  Aligned_cols=34  Identities=29%  Similarity=0.445  Sum_probs=29.1

Q ss_pred             ChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          115 DEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       115 ~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      ++..|+.|..- +.++..|..||+.++||+..|..
T Consensus         2 ~~~~v~~L~~m-Gf~~~~~~~AL~~~~~nve~A~~   35 (37)
T PF00627_consen    2 DEEKVQQLMEM-GFSREQAREALRACNGNVERAVD   35 (37)
T ss_dssp             HHHHHHHHHHH-TS-HHHHHHHHHHTTTSHHHHHH
T ss_pred             CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHH
Confidence            46778888887 99999999999999999999853

The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	582
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 47/331 (14%), Positives = 95/331 (28%), Gaps = 88/331 (26%)

Query: 298 QDDF-----CYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAA 352
           +D F     C + +        + + S   I   IMS++       +        + M  
Sbjct: 26  EDAFVDNFDCKDVQDMP-----KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80

Query: 353 EAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGD--HSGALRVACAHLGPLAASHPA 410
           + VEE+  ++  F +       +   +     +   D  ++     A         S   
Sbjct: 81  KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-----KYNVSRLQ 135

Query: 411 LLKPLKETLLALLQPNEDVLV---KGFPLHTLATSLQVA-----------------IGRR 450
               L++ LL  L+P ++VL+    G     +A  L V                  +   
Sbjct: 136 PYLKLRQALLE-LRPAKNVLIDGVLGSGKTWVA--LDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 451 LGIEEPQLMKILRATLHT-----------------HNEWFK-----LQMCKDRFESLLRI 488
              E   ++++L+  L+                       +     L   K     LL  
Sbjct: 193 NSPET--VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-- 248

Query: 489 DLLKEVYTPFLATVAMSKSHADSTQGSSQITI-SSNARVSE--DGSSPNQVSSAD----F 541
            +L  V          +    ++   S +I + +   +V++    ++   +S        
Sbjct: 249 -VLLNVQ---------NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 542 VCDENAIL--KV--MEFLALPR-ADAIHLLA 567
             DE   L  K        LPR     +   
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 4e-06
 Identities = 30/220 (13%), Positives = 75/220 (34%), Gaps = 38/220 (17%)

Query: 6   FKEAYEEFKHVLLTFIYDKDD--PTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFA 63
           +++ ++         ++      PT  +++ W +  + ++  +++ + +  L    P   
Sbjct: 371 YRKMFDRL------SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK-- 422

Query: 64  MTLRYLISIHKEFCFHQGVPSPISDLTD--RLLLEERDPPATPQESLYEAPPFDEVDIQA 121
                 ISI      +  +   + +     R +++  + P T        P  D+     
Sbjct: 423 ---ESTISIPS---IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH 476

Query: 122 LA-HAVKITRQGAVDSLRFARGDLFQAF---QNELCQ----MRLDVSMLDEL--VREYCV 171
           +  H   I     +   R     +F  F   + ++           S+L+ L  ++ Y  
Sbjct: 477 IGHHLKNIEHPERMTLFR----MVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532

Query: 172 YRGIVDSGLSTPSGTQTISIPIK-VDKPESGCCSSRNCSL 210
           Y  I D   + P   + ++  +  + K E     S+   L
Sbjct: 533 Y--ICD---NDPKYERLVNAILDFLPKIEENLICSKYTDL 567

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	582
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	93.39
2di0_A	71	Activating signal cointegrator 1 complex subunit 2	88.95
2g3q_A	43	Protein YBL047C; endocytosis, solution structure,	86.13
1wiv_A	73	UBP14, ubiquitin-specific protease 14; ubiquitin a	85.46
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	84.63
2dak_A	63	Ubiquitin carboxyl-terminal hydrolase 5; isopeptid	84.46
2ekk_A	47	UBA domain from E3 ubiquitin-protein ligase HUWE1;	84.44
1vg5_A	73	RSGI RUH-014, rhomboid family protein; UBA domain,	84.38
1z96_A	40	DNA-damage, UBA-domain protein MUD1; ubiquitin, th	84.33
2ooa_A	52	E3 ubiquitin-protein ligase CBL-B; alpha-helical d	83.97
2cpw_A	64	CBL-interacting protein STS-1 variant; ubiquitin a	82.59
1veg_A	83	NEDD8 ultimate buster-1; ubiquitin associated doma	81.64

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=93.39  E-value=0.074  Score=46.51  Aligned_cols=38  Identities=26%  Similarity=0.326  Sum_probs=36.1

Q ss_pred             CCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          112 PPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       112 ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      ..+++.||.-+..-.+.||..|+.+|+-++||+..|..
T Consensus        62 ~~i~~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~   99 (102)
T 1tr8_A           62 MEIPEDDIELVMNQTGASREDATRALQETGGDLAEAIM   99 (102)
T ss_dssp             CCCCHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence            57999999999999999999999999999999999964

>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=88.95  E-value=0.52  Score=39.23  Aligned_cols=40  Identities=28%  Similarity=0.334  Sum_probs=35.0

Q ss_pred             ccChhhHHHHHHHhc-CChhHHHHHHHHhcCCHHHHHHHHh
Q 008001          542 VCDENAILKVMEFLA-LPRADAIHLLAQYNGNAETVIQQIF  581 (582)
Q Consensus       542 ~~~e~ail~vmefla-lpr~dai~ll~qy~g~~e~viqq~~  581 (582)
                      +-=++.|-.|.|.+. |+.+=...+|..||+|+|.||+.||
T Consensus        11 ~~l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LL   51 (71)
T 2di0_A           11 VELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNIL   51 (71)
T ss_dssp             HHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHH
Confidence            334678888999874 9999999999999999999999987

>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1

Probab=86.13  E-value=0.84  Score=33.21  Aligned_cols=38  Identities=13%  Similarity=0.195  Sum_probs=33.5

Q ss_pred             ChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHhC
Q 008001          544 DENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA  582 (582)
Q Consensus       544 ~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~~  582 (582)
                      +|.+|-++|+ |-.||.+|+.-|...|||+|.-+.-||.
T Consensus         4 ~e~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~A~~~L~~   41 (43)
T 2g3q_A            4 KSLAVEELSG-MGFTEEEAHNALEKCNWDLEAATNFLLD   41 (43)
T ss_dssp             HHHHHHHHHT-TTSCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             CHHHHHHHHH-cCCCHHHHHHHHHHhCcCHHHHHHHHHc
Confidence            5788889988 6799999999999999999998887763

>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=85.46  E-value=1.5  Score=35.86  Aligned_cols=38  Identities=18%  Similarity=0.296  Sum_probs=33.8

Q ss_pred             CCCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          111 APPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       111 ~ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      .|..++..|+.|. ..+.+|+.|+.+||.++||+..|..
T Consensus        25 ~~~~~~~~v~~L~-~MGF~~~~a~~AL~~t~~nve~Ave   62 (73)
T 1wiv_A           25 TSDIDQSSVDTLL-SFGFAEDVARKALKASGGDIEKATD   62 (73)
T ss_dssp             SCSSCHHHHHHHH-HHTCCHHHHHHHHHHTTSCHHHHHH
T ss_pred             CCCCCHHHHHHHH-HcCCCHHHHHHHHHHhCCCHHHHHH
Confidence            5678999999997 5799999999999999999998853

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.63  E-value=1.1  Score=35.33  Aligned_cols=40  Identities=18%  Similarity=0.195  Sum_probs=34.2

Q ss_pred             cCCCCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHHH
Q 008001          109 YEAPPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAFQ  149 (582)
Q Consensus       109 ~e~ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Afq  149 (582)
                      .+.+.+++..|+.|.. .+.+|..|+.+||.+.||+..|..
T Consensus         3 ~~~~~~~~~~v~~L~~-MGF~~~~a~~AL~~t~~nve~A~e   42 (63)
T 2dak_A            3 SGSSGPPEDCVTTIVS-MGFSRDQALKALRATNNSLERAVD   42 (63)
T ss_dssp             CCSCCCCHHHHHHHHH-HTCCHHHHHHHHHHTTSCSHHHHH
T ss_pred             CCCCCCCHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHH
Confidence            3445678889999987 799999999999999999988853

>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.46  E-value=1.6  Score=34.40  Aligned_cols=38  Identities=21%  Similarity=0.404  Sum_probs=34.4

Q ss_pred             cChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHh
Q 008001          543 CDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIF  581 (582)
Q Consensus       543 ~~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~  581 (582)
                      .++..|-++|+ |-.||..|+.-|...+||+|..+.-||
T Consensus         8 ~~~~~v~~L~~-MGF~~~~a~~AL~~t~~nve~A~e~L~   45 (63)
T 2dak_A            8 PPEDCVTTIVS-MGFSRDQALKALRATNNSLERAVDWIF   45 (63)
T ss_dssp             CCHHHHHHHHH-HTCCHHHHHHHHHHTTSCSHHHHHHHH
T ss_pred             CCHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            57889999998 688999999999999999999888776

>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.44  E-value=2  Score=31.83  Aligned_cols=42  Identities=12%  Similarity=0.285  Sum_probs=36.1

Q ss_pred             CccccChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHhC
Q 008001          539 ADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA  582 (582)
Q Consensus       539 ~~~~~~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~~  582 (582)
                      ++...++..|-++|+ |-.||..|+.-|... ||+|.-+.-||.
T Consensus         4 ~~~~~~~~~v~~L~~-MGF~~~~a~~AL~~~-~n~e~A~~~L~~   45 (47)
T 2ekk_A            4 GSSGVNQQQLQQLMD-MGFTREHAMEALLNT-STMEQATEYLLT   45 (47)
T ss_dssp             CCCSSCHHHHHHHHH-HHCCHHHHHHHHHHS-CSHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHH-cCCCHHHHHHHHHHc-CCHHHHHHHHHc
Confidence            356779999999999 789999999999998 599998887763

>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=84.38  E-value=2.8  Score=34.64  Aligned_cols=40  Identities=15%  Similarity=0.294  Sum_probs=35.0

Q ss_pred             ccChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHhC
Q 008001          542 VCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA  582 (582)
Q Consensus       542 ~~~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~~  582 (582)
                      .-.|..|-++|| |=.+|.+|+.-|...+||.|..+.-||.
T Consensus        27 ~~~ee~I~~L~e-MGF~r~~a~~AL~~~~~nve~Ave~Ll~   66 (73)
T 1vg5_A           27 AASEEQIQKLVA-MGFDRTQVEVALAAADDDLTVAVEILMS   66 (73)
T ss_dssp             CCCHHHHHHHHT-TTCCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             cccHHHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence            456788999998 5789999999999999999999988873

>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1

Probab=84.33  E-value=0.74  Score=32.43  Aligned_cols=33  Identities=27%  Similarity=0.182  Sum_probs=29.0

Q ss_pred             ChhhHHHHHHHhccchhhHhHHHHhhhccHHHHH
Q 008001          115 DEVDIQALAHAVKITRQGAVDSLRFARGDLFQAF  148 (582)
Q Consensus       115 ~EvdiQaLahaveltRq~AvdsLr~akGDl~~Af  148 (582)
                      .+..|+.|..- +.+|+.|+.+|+.+.||+..|.
T Consensus         4 ~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~   36 (40)
T 1z96_A            4 LNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAA   36 (40)
T ss_dssp             HHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHH
T ss_pred             HHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHH
Confidence            35578888874 9999999999999999999886

>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A

Probab=83.97  E-value=0.88  Score=36.07  Aligned_cols=30  Identities=20%  Similarity=0.188  Sum_probs=27.0

Q ss_pred             hhhHHHHHHHhcCChhHHHHHHHHhcCCHHH
Q 008001          545 ENAILKVMEFLALPRADAIHLLAQYNGNAET  575 (582)
Q Consensus       545 e~ail~vmeflalpr~dai~ll~qy~g~~e~  575 (582)
                      |..|-++|+ |-.+|.+||+.|++-+||+|-
T Consensus        12 ~~~Ia~Lm~-mGFsr~~ai~AL~~a~nnve~   41 (52)
T 2ooa_A           12 DAKIAKLMG-EGYAFEEVKRALEIAQNNVEV   41 (52)
T ss_dssp             HHHHHHHHH-TTCCHHHHHHHHHHTTTCHHH
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHhCCCHHH
Confidence            379999998 578999999999999999985

>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1

Probab=82.59  E-value=3.3  Score=32.98  Aligned_cols=39  Identities=26%  Similarity=0.400  Sum_probs=34.7

Q ss_pred             cChhhHHHHHHHhcCChhHHHHHHHHhcC-CHHHHHHHHhC
Q 008001          543 CDENAILKVMEFLALPRADAIHLLAQYNG-NAETVIQQIFA  582 (582)
Q Consensus       543 ~~e~ail~vmeflalpr~dai~ll~qy~g-~~e~viqq~~~  582 (582)
                      .+|..|-++|+ |-.||..|+.-|...+| |+|.-+.-||.
T Consensus        18 ~~e~~i~~L~~-MGF~~~~a~~AL~~t~~~nve~A~ewL~~   57 (64)
T 2cpw_A           18 KHGSALDVLLS-MGFPRARAQKALASTGGRSVQTACDWLFS   57 (64)
T ss_dssp             SCCCHHHHHHH-HTCCHHHHHHHHHHTTTSCHHHHHHHHHS
T ss_pred             CCHHHHHHHHH-cCCCHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence            67889989988 68999999999999998 99998888773

>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1

Probab=81.64  E-value=5.3  Score=33.90  Aligned_cols=43  Identities=16%  Similarity=0.176  Sum_probs=36.6

Q ss_pred             CCccccChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHh
Q 008001          538 SADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIF  581 (582)
Q Consensus       538 ~~~~~~~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~  581 (582)
                      .+...-+|..|-++|+. -.+|..|+..|...+||+|.-+.-||
T Consensus        23 ~~~~~~~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~   65 (83)
T 1veg_A           23 SRQASPSQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLA   65 (83)
T ss_dssp             SSSCCCCHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            33445578999999985 68999999999999999999988887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	582
d1vg5a_	73	Rhomboid family protein At3g58460 {Thale cress (Ar	87.56
d1wiva_	73	Ubiquitin isopeptidase T {Thale cress (Arabidopsis	85.98

>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Rhomboid family protein At3g58460
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.56  E-value=0.75  Score=35.92  Aligned_cols=41  Identities=15%  Similarity=0.278  Sum_probs=35.1

Q ss_pred             cccChhhHHHHHHHhcCChhHHHHHHHHhcCCHHHHHHHHhC
Q 008001          541 FVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA  582 (582)
Q Consensus       541 ~~~~e~ail~vmeflalpr~dai~ll~qy~g~~e~viqq~~~  582 (582)
                      +..+|.+|-.+||. -.+|..|++-|...+||+|.-+.-||.
T Consensus        26 ~~~~ee~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~   66 (73)
T d1vg5a_          26 VAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMS   66 (73)
T ss_dssp             SCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred             cCcCHHHHHHHHHh-CCCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence            45678899998874 469999999999999999999888773

>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin isopeptidase T
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.98  E-value=0.65  Score=36.29  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=32.5

Q ss_pred             CCCCChhhHHHHHHHhccchhhHhHHHHhhhccHHHHH
Q 008001          111 APPFDEVDIQALAHAVKITRQGAVDSLRFARGDLFQAF  148 (582)
Q Consensus       111 ~ppF~EvdiQaLahaveltRq~AvdsLr~akGDl~~Af  148 (582)
                      .++.+|.-|+.|. ..+.+|+.|+.+||.++||+..|-
T Consensus        25 ~~~~d~~~i~~L~-~MGF~~~~a~~AL~~~~~n~e~Av   61 (73)
T d1wiva_          25 TSDIDQSSVDTLL-SFGFAEDVARKALKASGGDIEKAT   61 (73)
T ss_dssp             SCSSCHHHHHHHH-HHTCCHHHHHHHHHHTTSCHHHHH
T ss_pred             CCCCCHHHHHHHH-hcCCCHHHHHHHHHHcCCCHHHHH
Confidence            4456788899998 699999999999999999999884