Citrus Sinensis ID: 008038
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | 2.2.26 [Sep-21-2011] | |||||||
| Q40588 | 578 | L-ascorbate oxidase OS=Ni | N/A | no | 0.951 | 0.955 | 0.761 | 0.0 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.95 | 0.951 | 0.721 | 0.0 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.95 | 0.998 | 0.715 | 0.0 | |
| P14133 | 587 | L-ascorbate oxidase OS=Cu | N/A | no | 0.932 | 0.921 | 0.740 | 0.0 | |
| Q1PDH6 | 566 | Laccase-16 OS=Arabidopsis | no | no | 0.920 | 0.943 | 0.342 | 2e-70 | |
| Q9FLB5 | 565 | Laccase-12 OS=Arabidopsis | no | no | 0.855 | 0.877 | 0.318 | 3e-66 | |
| Q5N9X2 | 579 | Laccase-4 OS=Oryza sativa | no | no | 0.867 | 0.868 | 0.323 | 8e-65 | |
| Q8RYM9 | 562 | Laccase-2 OS=Oryza sativa | no | no | 0.870 | 0.898 | 0.315 | 1e-63 | |
| Q56YT0 | 570 | Laccase-3 OS=Arabidopsis | no | no | 0.806 | 0.821 | 0.324 | 9e-63 | |
| Q9FJD5 | 577 | Laccase-17 OS=Arabidopsis | no | no | 0.896 | 0.901 | 0.309 | 4e-62 |
| >sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/553 (76%), Positives = 473/553 (85%), Gaps = 1/553 (0%)
Query: 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVI 87
+KTRH+KW+VEY+ WSPD +ES+VMGINGQFPGPTIRA+AGDT+AV LTNKL+TEGVVI
Sbjct: 27 AAKTRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVI 86
Query: 88 HWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSL 147
HWHGIRQ+GTPWADGTA+ISQC INPGET+LYRFKVDKAGTYFYHGH GMQRSAGLYGSL
Sbjct: 87 HWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKVDKAGTYFYHGHYGMQRSAGLYGSL 146
Query: 148 IVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFN 207
IV+V +GEKEPFHYDGEFNLLLSDWWH+ HEQEV LSS PLRWIGEPQTLL+NGRGQ+N
Sbjct: 147 IVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDLSSNPLRWIGEPQTLLLNGRGQYN 206
Query: 208 CSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV 267
CSLAA FS QCKLRG EQ APQIL V+PNK YRLR+ASTTAL SL+LA+ HKMVV
Sbjct: 207 CSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVV 266
Query: 268 VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNY 327
VEADGNYVQPF V DMDIYSGESYSVL T+QDP+ NYWIS VRGR+P TP LTLLNY
Sbjct: 267 VEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLNY 326
Query: 328 HPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 387
P SASK P PPPI P W+DY+HSKSFSNKIFALMGSPKPP HRR+ LLNTQN I+G
Sbjct: 327 LPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQNKIDG 386
Query: 388 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 447
+TKWAINNVSL LP YLGSI+YG+ +AFD PP+NF +YDV+K N+N+T G+GV
Sbjct: 387 YTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGV 445
Query: 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP 507
YML NTT+D+ILQNANA+ ++SEIHPWHLHGHDFWVLG GEGKF+++D KKFNLKNPP
Sbjct: 446 YMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPP 505
Query: 508 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALAC 567
L+NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+GMGV+ A GV V IP +ALAC
Sbjct: 506 LRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIPKEALAC 565
Query: 568 GLTGKRFMNPKQN 580
GLTGK M+ K N
Sbjct: 566 GLTGKMLMSNKHN 578
|
May be involved in a redox system involving ascorbic acid. Nicotiana tabacum (taxid: 4097) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 3 |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/552 (72%), Positives = 457/552 (82%), Gaps = 1/552 (0%)
Query: 25 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEG 84
+S GS+ RHYKWEVEYMFW+PDC E+IVMGINGQFPGPTIRA AGDT+ VEL NKL+TEG
Sbjct: 27 SSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEG 86
Query: 85 VVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLY 144
VVIHWHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLY
Sbjct: 87 VVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLY 146
Query: 145 GSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRG 204
GSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRG
Sbjct: 147 GSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRG 206
Query: 205 QFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264
QF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH
Sbjct: 207 QFDCSIAAKY-DSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHP 265
Query: 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324
++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G RGR P TPP LTL
Sbjct: 266 LLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTL 325
Query: 325 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 384
LNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP +RR+ LLNTQN
Sbjct: 326 LNYLPNSVSKLPTSPPPETPAWDDFDRSKNFTYRITAAMGSPKPPVKSNRRIFLLNTQNV 385
Query: 385 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 444
ING+ KWAIN+VSL LPPTPYLG++K+ L AFDQN PPE F +YD+ PP N T +G
Sbjct: 386 INGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIG 445
Query: 445 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLK 504
+GVY + VDVILQNAN ++ NLSEIHPWHLHGHDFWVLG G+GKFT E+E NLK
Sbjct: 446 NGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLK 505
Query: 505 NPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQA 564
NPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +A
Sbjct: 506 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKA 565
Query: 565 LACGLTGKRFMN 576
LACG T K +N
Sbjct: 566 LACGGTAKSLIN 577
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/552 (71%), Positives = 457/552 (82%), Gaps = 1/552 (0%)
Query: 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
S+ RHYKWEVEYMFW+P+C E+IVMGINGQFPGPTIRA AGD++ VELTNKL+TEGVVIH
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLI 148
WHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLYGSLI
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLI 120
Query: 149 VDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 208
VD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRGQF+C
Sbjct: 121 VDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC 180
Query: 209 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268
S+AA + + + E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH+++VV
Sbjct: 181 SIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239
Query: 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328
EADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY
Sbjct: 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYL 299
Query: 329 PTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 388
P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR+ LLNTQN ING+
Sbjct: 300 PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359
Query: 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 448
KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ PP N T +G+GVY
Sbjct: 360 VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVY 419
Query: 449 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508
+ VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+ E+E NLKNPPL
Sbjct: 420 QFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479
Query: 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568
+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG
Sbjct: 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACG 539
Query: 569 LTGKRFMNPKQN 580
T K +N +N
Sbjct: 540 GTAKSLINNPKN 551
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/543 (74%), Positives = 455/543 (83%), Gaps = 2/543 (0%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
K +HYKW+VEYMFWSPDC E+IVMGING+FPGPTIRA AGD + VELTNKL+TEGVVIHW
Sbjct: 37 KIKHYKWDVEYMFWSPDCVENIVMGINGEFPGPTIRANAGDIVVVELTNKLHTEGVVIHW 96
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
HGI Q GTPWADGTASISQC INPGET+ YRF VDKAGTYFYHGHLGMQRSAGLYGSLIV
Sbjct: 97 HGILQRGTPWADGTASISQCAINPGETFTYRFVVDKAGTYFYHGHLGMQRSAGLYGSLIV 156
Query: 150 DVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCS 209
D +G EPFHYD E NLLLSDWWH+SVH+QEVGLSS+P+RWIGEPQ++LING+GQF+CS
Sbjct: 157 DPPEGRSEPFHYDEEINLLLSDWWHQSVHKQEVGLSSKPMRWIGEPQSILINGKGQFDCS 216
Query: 210 LAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE 269
+AA ++ G +QC+L G E+CAP ILHVQP KTYR+RIASTTALASLN A+ NH+++VVE
Sbjct: 217 IAAKYNQG-LKQCELSGKEKCAPFILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVE 275
Query: 270 ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 329
ADGNYVQPF D+DIYSGESYSVL+TT+Q+P NYW+S GVR R P TPP LTLLNY P
Sbjct: 276 ADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVRARLPKTPPGLTLLNYLP 335
Query: 330 TSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT 389
SASK+P+SPPP TP W+D+D SK+F+ +IFA MGSPKPP ++RRL LLNTQN INGF
Sbjct: 336 NSASKLPISPPPETPHWEDFDRSKNFTFRIFAAMGSPKPPVRYNRRLFLLNTQNRINGFM 395
Query: 390 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 449
KWAINNVSL LPPTPYL ++K L AF+QN PPE F YD+ PP N TT G+GVY
Sbjct: 396 KWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYK 455
Query: 450 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEKKFNLKNPPL 508
+ TVDVILQNAN + PN+SEIHPWHLHGHDFWVLG GEGKF EDEKK NLKNPPL
Sbjct: 456 FNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPL 515
Query: 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568
+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GV VG IP +ALACG
Sbjct: 516 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHMVGMIPPKALACG 575
Query: 569 LTG 571
T
Sbjct: 576 STA 578
|
May be involved in a redox system involving ascorbic acid. Cucumis sativus (taxid: 3659) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 291/587 (49%), Gaps = 53/587 (9%)
Query: 1 MGLGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFP 60
M + R V+T ++ +L S T+ S RHYK+ V + C ++ +NGQFP
Sbjct: 1 MEIPRRFCICVLTFFVFVLLS--PTTVHSIIRHYKFNV-MTNTTKLCSSKPIVTVNGQFP 57
Query: 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYR 120
GPTI AR GDTI +++ N + V IHWHGIRQL T WADG A I+QCPI PG+ YL+
Sbjct: 58 GPTIVAREGDTILIKVVNHV-KYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHN 116
Query: 121 FKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVH 178
F + + GT ++H H+ R A ++G++++ G PF E ++LS+WW V
Sbjct: 117 FTLTGQRGTLWWHAHILWLR-ATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDV- 174
Query: 179 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238
E+ + +SR ING +GS C + + L V+
Sbjct: 175 EELINEASRIGTAPSASDAHTINGH------------SGSISNCPSQSSYG-----LPVR 217
Query: 239 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN 298
KTY LRI + L + H + VVE D Y +P++ D + I G++ +VLLT N
Sbjct: 218 AGKTYMLRIINAALNEELFFKIAGHVLTVVEVDAVYTKPYKTDTVFIAPGQTTNVLLTAN 277
Query: 299 QDPSYNYWISAGV---------RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 349
+ NY ++A AT + + TS + S PP W
Sbjct: 278 ANAGSNYMVAATTFTDAHIPYDNVTATATLHYIGHTSTVSTSKKTVLASLPPQNATWVAT 337
Query: 350 DHSKSFSNKIFALMGSPKPPTNFHRRLTLL------NTQNTINGFTKWA-INNVSLTLPP 402
++S + + +L + PT L Q+ NG A INNV+ T+P
Sbjct: 338 KFTRSLRS-LNSLEYPARVPTTVEHSLFFTVGLGANPCQSCNNGVRLVAGINNVTFTMPK 396
Query: 403 TPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVI 459
T L + + + F + P + SN YD P VNA T G+ +Y L N TV ++
Sbjct: 397 TALLQAHFFNISGVFTDDFPAKP-SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIV 455
Query: 460 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIFPYG 518
LQN I LS+ HP+HLHG +F+ +GRG G F E D K FNL +P +NT + G
Sbjct: 456 LQNTAMI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGG 512
Query: 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 565
WTA+RF+ADNPG W HCH+E H G+ +A V+ G+ P+Q+L
Sbjct: 513 WTAIRFIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 279/581 (48%), Gaps = 85/581 (14%)
Query: 16 ILMLCSVFETSYG-SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAV 74
+L CS+F S +K +H+ + ++ CK + +NG FPGPT+ GDT+ V
Sbjct: 10 LLFFCSLFSASLIIAKVQHHDFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNNGDTLEV 69
Query: 75 ELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHG 133
++ N+ + IHWHG+RQ+ T WADG ++QCPI PG++Y YRF + + GT ++H
Sbjct: 70 KVHNRA-RYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGTLWWHA 128
Query: 134 HLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWI 192
H R A +YG+LI+ G PF D + L+L +WW+ V + ++ R
Sbjct: 129 HSSWLR-ATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWN----ANPVDVINQATRTG 183
Query: 193 GEP---QTLLINGR--GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRI 247
P ING+ +NCS ++ + +T LR+
Sbjct: 184 AAPNISDAYTINGQPGDLYNCSTKETV-------------------VVPINSGETSLLRV 224
Query: 248 ASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 307
+ L V NHK+ VV AD +Y++PF + + G++ VLLT +Q P Y+I
Sbjct: 225 INAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPK-RYYI 283
Query: 308 SAGVRGRKPATP----PALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALM 363
+A P +L Y T+ + P+ P + P ++D + SFS K +L
Sbjct: 284 AARAYQSAQNAPFDNTTTTAILQYKKTTTTSKPIMP--VLPAFNDTNTVTSFSRKFKSLR 341
Query: 364 GSPKPPT--------------NFHRRLTLLNTQNTING--FTKWAINNVSLTLPPTPYLG 407
P T N ++ Q +NG FT ++NNVS LP
Sbjct: 342 NVVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQG-LNGTRFTA-SMNNVSFVLPS----- 394
Query: 408 SIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT------------LGSGVYMLGLNTT 455
+ L A NG P F+ ++ KPPV + T G+ +Y L +
Sbjct: 395 --NFSLLQA-HSNGIPGVFTTDFP-SKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSR 450
Query: 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEKKFNLKNPPLKNTAVI 514
V V+LQ+ N + SE HP HLHG+DF+++G G G F K+D KFNL +PPL+NT +
Sbjct: 451 VQVVLQDTNIVT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVAV 507
Query: 515 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 555
GW +RFVADNPG W HCH++ HI G+ +A V+
Sbjct: 508 PVNGWAVIRFVADNPGVWLMHCHLD--VHIKWGLAMAFLVD 546
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 279/572 (48%), Gaps = 69/572 (12%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWH 90
TRHY++ V+ + C ++ +NGQ PGP + AR GD + + +TN + + +HWH
Sbjct: 30 TRHYEFNVQMANATRLCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNV-AHNISLHWH 88
Query: 91 GIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV 149
G+RQ+ T WADG A I+QCPI G++Y+Y F V + GT ++H H+ R A +YG+L++
Sbjct: 89 GVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLR-ATVYGALVI 147
Query: 150 DVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT---LLINGRGQ 205
G PF E ++ +WW+ E + ++ ++ G P ING
Sbjct: 148 LPKLGVPYPFPAPHKEVPVIFGEWWNADTEE----VVNQAVQTGGGPNVSDAFTINGLPG 203
Query: 206 --FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263
+NCS F L V+P KTY LR+ + L AV NH
Sbjct: 204 PLYNCSAQDTFK-------------------LKVKPGKTYMLRLINAALNEELFFAVANH 244
Query: 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISAG-VRGRKPATPPA 321
+ VVE D YV+PF VD + I G++ +VLLT P N+++SA +P T
Sbjct: 245 TLTVVEVDAVYVKPFTVDTLVISPGQTTNVLLTAKPYYPGANFYMSAAPYSTARPGTFGN 304
Query: 322 LT---LLNYH-----PTSASKIPLSP--PPITPRWDDYDHSKSFSNKIFALMGSPKP--- 368
T +L Y P++AS + P P P+ +D D +F++K+ +L P
Sbjct: 305 TTVAGILEYENPAMSPSAASFVKGLPLFKPTLPQLNDTDFVTNFTDKLRSLATPEYPAAV 364
Query: 369 PTNFHRRLTL------------LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKD- 415
P + +R + Q N ++NNVS LP L S GL
Sbjct: 365 PQSVDKRFFFTVGLGTLPCPANMTCQGPNNTQMAASMNNVSFVLPARALLQSHFTGLSSG 424
Query: 416 AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 475
+ + P S PP N N G+ + +L NT+V++++Q+ + + E HP
Sbjct: 425 VYAPDFPVAPLSPFNYTGTPPNNTNVKTGTKLLVLRYNTSVELVMQDTSILG---IESHP 481
Query: 476 WHLHGHDFWVLGRGEGKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 534
HLHG +F+V+G+G G + D KFNL +P +NT + GW A+RF+ADNPG W
Sbjct: 482 LHLHGFNFFVIGQGFGNYDAVNDPAKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFM 541
Query: 535 HCHIEPHFHIGMGVV-LALGVETVGNIPNQAL 565
HCH+E H G+ + L L G+ PNQ L
Sbjct: 542 HCHLEAHTTWGLRMAWLVLD----GSHPNQKL 569
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 276/555 (49%), Gaps = 50/555 (9%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWH 90
+ Y++++ S C E ++ +NG +PGPTI AR GD + V +TN + + IHWH
Sbjct: 28 VKRYQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHV-KHNMTIHWH 86
Query: 91 GIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA-GTYFYHGHLGMQRSAGLYGSLIV 149
G++Q WADG A ++QCPI G +Y+Y F V + GT ++H H+ R A ++G++++
Sbjct: 87 GLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMR-ATVHGAIVI 145
Query: 150 DVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 208
A G PF D E ++L +WWH V E R +G +
Sbjct: 146 LPAAGVPYPFPKPDDEAEIVLGEWWHADVETVE-----RQGSMLGMAPNMS--------- 191
Query: 209 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268
AH NG +E+ L VQ KTY LRI + L ++ H M VV
Sbjct: 192 --DAHTINGKPGPLVPFCSEKHT-YALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVV 248
Query: 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA---TPPALTLL 325
E D Y +PF + + G++ +VL++ +Q P Y++ A P A +L
Sbjct: 249 EIDATYTKPFAASTVQLSPGQTMNVLVSADQSPG-RYFMVAKPFNDVPIPADNKTATAIL 307
Query: 326 NYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNF------HRRLTL- 378
Y S +P + P P + +F +K+ +L SP+ P + H T+
Sbjct: 308 QYAGVPTSVVP-ALPQTMPATNSTGSVAAFHDKLRSL-NSPRYPADVPLAVDRHLLYTIG 365
Query: 379 --LNTQNTINGFTKWA--INNVSLTLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYD 431
++ T ++ A +NN++ +P T L + YG K F + PP F+ Y
Sbjct: 366 LNIDPCETCLNRSRLAASLNNITFVMPRTALLQAHYYGQKGVFAADFPDRPPARFN--YT 423
Query: 432 VMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG 491
+ T+LG+ + + N TV+++LQ+ N + E HP+HLHG++F+V+GRG G
Sbjct: 424 GVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLS---VESHPFHLHGYNFFVVGRGVG 480
Query: 492 KFT-KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
F +D K+NL +PP +NT + GWTA+RF ADNPG W HCH+E H G+ +
Sbjct: 481 NFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLE--VHTSWGLKM 538
Query: 551 ALGVETVGNIPNQAL 565
A VE G+ P++++
Sbjct: 539 AFLVED-GSGPDESV 552
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q56YT0|LAC3_ARATH Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 267/542 (49%), Gaps = 74/542 (13%)
Query: 47 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106
C+ + +NGQ+PGPT+ R GD++A+ + N+ + IHWHGIRQL PWADG I
Sbjct: 43 CRTHQSITVNGQYPGPTLVVRNGDSLAITVINRA-RYNISIHWHGIRQLRNPWADGPEYI 101
Query: 107 SQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGE 164
+QCPI PG+TY YRFK+ D+ GT ++H H R A +YG+LI+ G PF +
Sbjct: 102 TQCPIRPGQTYTYRFKIEDQEGTLWWHAHSRWLR-ATVYGALIIYPRLGSPYPFSMPKRD 160
Query: 165 FNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKL 224
+LL +WW R+ P+ + + Q + + + G +C
Sbjct: 161 IPILLGEWWDRN-----------PMDVLKQAQ--FTGAAANVSDAYTINGQPGDLYRCSR 207
Query: 225 RGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMD 284
G + + P +T +LR+ + L +V NH+ VVE D Y +PF + +
Sbjct: 208 AGTIR-----FPIFPGETVQLRVINAGMNQELFFSVANHQFTVVETDSAYTKPFTTNVIM 262
Query: 285 IYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPP-----ALTLLNY--HPT--SASKI 335
I G++ +VLLT NQ P Y+++A R A P +L Y PT +
Sbjct: 263 IGPGQTTNVLLTANQRPG-RYYMAA--RAYNSANAPFDNTTTTAILQYVNAPTRRGRGRG 319
Query: 336 PLSPP-PITPRWDDYDHSKSFSNKIFALMGSPKPPTN-----FHRRLTLLNTQNT----- 384
++P P+ P ++D + +F+N++ +P P F L L+N N
Sbjct: 320 QIAPVFPVLPGFNDTATATAFTNRLRYWKRAPVPQQVDENLFFTVGLGLINCANPNSPRC 379
Query: 385 --INGFTKWA--INNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNAN 440
NG T++A +NN+S LP + + Y G P F+ ++ + PPV +
Sbjct: 380 QGPNG-TRFAASMNNMSFVLPRSNSVMQAYY--------QGTPGIFTTDFPPV-PPVQFD 429
Query: 441 TT-----------LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489
T G+ Y L + V ++LQ+ + + P E HP HLHG+ F+V+G G
Sbjct: 430 YTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTP---ENHPMHLHGYQFYVVGSG 486
Query: 490 EGKFT-KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548
G F + D +FNL +PP +NT P GW A+RFVADNPGAW HCHI+ H G+ +
Sbjct: 487 FGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAM 546
Query: 549 VL 550
V
Sbjct: 547 VF 548
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 189/610 (30%), Positives = 291/610 (47%), Gaps = 90/610 (14%)
Query: 3 LGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGP 62
+ L+ + V +C +L+ F TRHY E++ + C ++ +NGQFPGP
Sbjct: 1 MALQLLLAVFSCVLLLPQPAFGI-----TRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGP 55
Query: 63 TIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFK 122
+ AR GD + +++ N++ + +HWHGIRQL + WADG A I+QCPI G++Y+Y +
Sbjct: 56 KLIAREGDQVLIKVVNQV-PNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYT 114
Query: 123 -VDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWH---RSV 177
V + GT +YH H+ RS +YG LI+ G PF E ++ +W++ ++
Sbjct: 115 IVGQRGTLWYHAHISWLRST-VYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFNADTEAI 173
Query: 178 HEQEVGLSSRPLRWIGEPQTLLINGRG--QFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 235
Q P ING +NCS F L
Sbjct: 174 IRQATQTGGGP----NVSDAYTINGLPGPLYNCSAKDTFR-------------------L 210
Query: 236 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLL 295
V+P KTY LR+ + L ++ NH + VVEAD YV+PFE + + I G++ +VLL
Sbjct: 211 RVKPGKTYLLRLINAALNDELFFSIANHTVTVVEADAIYVKPFETETILIAPGQTTNVLL 270
Query: 296 TTNQD-PSYNYWISA-------------GVRGRKPATPPALTLLNYHPTSASKIPLSPPP 341
T PS +++++A V G PP T + TS + L P
Sbjct: 271 KTKSSYPSASFFMTARPYVTGQGTFDNSTVAGILEYEPPKQTKGAHSRTSIKNLQLFKP- 329
Query: 342 ITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL--------LNTQN--TINGF 388
I P +D + + FSNK+ +L P P N R+ N +N T G
Sbjct: 330 ILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCNHKNNQTCQGP 389
Query: 389 TK-----WAINNVSLTLPPTPYLGSIKYGLK-DAFDQNGP-----PENFSNEYDVMKPPV 437
T +I+N+S T+P L S G + P P N++ PP
Sbjct: 390 TNTTMFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYTGT-----PPN 444
Query: 438 NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KE 496
N + G+ + +L NT+V++++Q+ + + +E HP HLHG +F+V+G+G G F +
Sbjct: 445 NTMVSNGTNLMVLPYNTSVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPNK 501
Query: 497 DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV-LALGVE 555
D + FNL +P +NT + GW A+RF+ADNPG W HCH+E H G+ + L L
Sbjct: 502 DPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLVLD-- 559
Query: 556 TVGNIPNQAL 565
G+ P+Q L
Sbjct: 560 --GDKPDQKL 567
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | ||||||
| 225436045 | 581 | PREDICTED: L-ascorbate oxidase-like [Vit | 0.972 | 0.970 | 0.761 | 0.0 | |
| 147844747 | 558 | hypothetical protein VITISV_044128 [Viti | 0.953 | 0.991 | 0.774 | 0.0 | |
| 118488761 | 594 | unknown [Populus trichocarpa] | 0.975 | 0.952 | 0.759 | 0.0 | |
| 224059236 | 566 | predicted protein [Populus trichocarpa] | 0.962 | 0.985 | 0.768 | 0.0 | |
| 224102875 | 597 | l-ascorbate oxidase precursor [Populus t | 0.975 | 0.948 | 0.751 | 0.0 | |
| 2493321 | 578 | RecName: Full=L-ascorbate oxidase; Short | 0.951 | 0.955 | 0.761 | 0.0 | |
| 255578674 | 589 | l-ascorbate oxidase, putative [Ricinus c | 0.987 | 0.972 | 0.724 | 0.0 | |
| 2827764 | 579 | RecName: Full=L-ascorbate oxidase; Short | 0.95 | 0.951 | 0.721 | 0.0 | |
| 543859 | 552 | RecName: Full=L-ascorbate oxidase; Short | 0.95 | 0.998 | 0.715 | 0.0 | |
| 356575058 | 574 | PREDICTED: L-ascorbate oxidase [Glycine | 0.974 | 0.984 | 0.701 | 0.0 |
| >gi|225436045|ref|XP_002275678.1| PREDICTED: L-ascorbate oxidase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/567 (76%), Positives = 493/567 (86%), Gaps = 3/567 (0%)
Query: 10 VVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAG 69
+++TC+ V + SKTRH+KWEVEYM+WSPDC E +VMGINGQFPGPTIRA AG
Sbjct: 13 LILTCFFSF---VIQLCLASKTRHFKWEVEYMYWSPDCMEGVVMGINGQFPGPTIRAVAG 69
Query: 70 DTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTY 129
DTI VELTN+L+TEGVVIHWHGIRQ GTPWADGTASISQC INPGET++YR+KVDKAGTY
Sbjct: 70 DTIVVELTNRLHTEGVVIHWHGIRQFGTPWADGTASISQCAINPGETFIYRYKVDKAGTY 129
Query: 130 FYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPL 189
FYHGH GMQRSAGLYGSL+V+V +G+KEPFHYDGEFNLLLSDWWH+ EQEV LSS+P
Sbjct: 130 FYHGHYGMQRSAGLYGSLVVEVGEGQKEPFHYDGEFNLLLSDWWHKGSQEQEVALSSKPF 189
Query: 190 RWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAS 249
RWIGEPQTLLINGRGQ+NCSLAAH +N S+ QC+ RGNEQC+PQILHVQP+KTYRLR++S
Sbjct: 190 RWIGEPQTLLINGRGQYNCSLAAHVTNSSSPQCQFRGNEQCSPQILHVQPHKTYRLRVSS 249
Query: 250 TTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309
TTALASLNL + NHKMV+VEADGNY+QP VDD+DIYSGESYSVL+ T+QDPS NYWIS
Sbjct: 250 TTALASLNLQIGNHKMVMVEADGNYIQPVAVDDLDIYSGESYSVLIHTDQDPSKNYWISV 309
Query: 310 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPP 369
VRGR+P TP LT+LNY TSASK+P S PP++P W+DY+HSKSFSNKI ALMGSPKPP
Sbjct: 310 SVRGREPKTPQGLTILNYQTTSASKLPTSTPPVSPLWNDYNHSKSFSNKILALMGSPKPP 369
Query: 370 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 429
T ++RR+ LLNTQNTINGFTKWAINN+SLTLPPTPYLG+IK+ L +AFDQ PPENF N+
Sbjct: 370 TTYNRRIILLNTQNTINGFTKWAINNISLTLPPTPYLGAIKHRLSNAFDQKSPPENFPND 429
Query: 430 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489
YDVMKPP N N+T G+GVYML TTVDVILQNANA+ +SEIHPWHLHGHDFWVLG G
Sbjct: 430 YDVMKPPTNTNSTYGNGVYMLEFRTTVDVILQNANALATGVSEIHPWHLHGHDFWVLGYG 489
Query: 490 EGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 549
EGKF ++D K+FNLKNPPL+NTAVIFP+GWTALRFVADNPG WAFHCHIEPH H+GMGVV
Sbjct: 490 EGKFREKDAKRFNLKNPPLRNTAVIFPFGWTALRFVADNPGVWAFHCHIEPHLHMGMGVV 549
Query: 550 LALGVETVGNIPNQALACGLTGKRFMN 576
A GV V ++PN ALACGLTGK M+
Sbjct: 550 FAEGVHLVKDVPNHALACGLTGKMLMS 576
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147844747|emb|CAN82127.1| hypothetical protein VITISV_044128 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/559 (77%), Positives = 487/559 (87%), Gaps = 6/559 (1%)
Query: 18 MLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELT 77
MLC SKTRH+KWEVEYM+WSPDC E +VMGINGQFPGPTIRA AGDTI VELT
Sbjct: 1 MLC------LASKTRHFKWEVEYMYWSPDCMEGVVMGINGQFPGPTIRAVAGDTIVVELT 54
Query: 78 NKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGM 137
N+L+TEGVVIHWHGIRQ GTPWADGTASISQC INPGET++YR+KVDKAGTYFYHGH GM
Sbjct: 55 NRLHTEGVVIHWHGIRQFGTPWADGTASISQCAINPGETFIYRYKVDKAGTYFYHGHYGM 114
Query: 138 QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 197
QRSAGLYGSL V+V +G+KEPFHYDGEFNLLLSDWWH+ EQEV LSS+P RWIGEPQT
Sbjct: 115 QRSAGLYGSLXVEVGEGQKEPFHYDGEFNLLLSDWWHKGSQEQEVALSSKPFRWIGEPQT 174
Query: 198 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN 257
LLINGRGQ+NCSLAAH +N S+ QC+ RGNEQCAPQILHVQP+KTYRLR++STTALASLN
Sbjct: 175 LLINGRGQYNCSLAAHVTNSSSPQCQFRGNEQCAPQILHVQPHKTYRLRVSSTTALASLN 234
Query: 258 LAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA 317
L + NHKMV+VEADGNY+QP VDD+DIYSGESYSVL+ T+QDPS NYWIS VRGR+P
Sbjct: 235 LQIGNHKMVMVEADGNYIQPVAVDDLDIYSGESYSVLIHTDQDPSXNYWISVSVRGREPK 294
Query: 318 TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLT 377
TP LT+LNY TSASK+P S PP++P W+DY+HSKSFSNKI ALMGSPKPPT ++RR+
Sbjct: 295 TPQGLTILNYQTTSASKLPTSTPPVSPLWNDYNHSKSFSNKILALMGSPKPPTTYNRRII 354
Query: 378 LLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPV 437
LLNTQNTINGFTKWAINN+SLTLPPTPYLG+IK+ L +AFDQ PPENF N+YDVMKPP
Sbjct: 355 LLNTQNTINGFTKWAINNISLTLPPTPYLGAIKHRLSNAFDQKSPPENFPNDYDVMKPPT 414
Query: 438 NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 497
N N+T G+GVYML TTVDVILQNANA+ +SEIHPWHLHGHDFWVLG GEGKF ++D
Sbjct: 415 NTNSTYGNGVYMLEFRTTVDVILQNANALATGVSEIHPWHLHGHDFWVLGYGEGKFREKD 474
Query: 498 EKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 557
K+FNLKNPPL+NTAVIFP+GWTALRFVADNPG WAFHCHIEPH H+GMGVV A GV V
Sbjct: 475 AKRFNLKNPPLRNTAVIFPFGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHLV 534
Query: 558 GNIPNQALACGLTGKRFMN 576
++PN ALACGLTGK M+
Sbjct: 535 KDVPNHALACGLTGKMLMS 553
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118488761|gb|ABK96191.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/569 (75%), Positives = 486/569 (85%), Gaps = 3/569 (0%)
Query: 10 VVVTCWIL-MLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARA 68
+++ C +L M+ TS + YKW+VEYM+WSPD E++VMGINGQFPGPTIRARA
Sbjct: 20 LIIWCILLYMIQCSSATSNKTGNHFYKWKVEYMYWSPDGIENVVMGINGQFPGPTIRARA 79
Query: 69 GDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGT 128
GD + V+LTNKL+TEGVVIHWHGIRQ GTPWADGTASISQC INPGET+ YRF VD+AGT
Sbjct: 80 GDIVHVQLTNKLHTEGVVIHWHGIRQKGTPWADGTASISQCVINPGETFDYRFTVDRAGT 139
Query: 129 YFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRP 188
YFYHGH GMQRSAGLYGS+IVDVA+GEKEPFHYDGEF+LLLSDWWH+SVH QEVGLSSRP
Sbjct: 140 YFYHGHYGMQRSAGLYGSMIVDVAEGEKEPFHYDGEFDLLLSDWWHKSVHHQEVGLSSRP 199
Query: 189 LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIA 248
+RWI EPQ LLINGRGQ+ CSLAAH N S QC + G+EQ AP ILHV PNKTYR+RIA
Sbjct: 200 MRWINEPQALLINGRGQYGCSLAAHHGNSSFSQCNITGHEQWAPYILHVDPNKTYRIRIA 259
Query: 249 STTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 308
STTALASLNLA+ NHKM+VVEADGNY+QPFE +D+DIYSGESYSVLL T+QD S NYWIS
Sbjct: 260 STTALASLNLAIGNHKMMVVEADGNYLQPFETNDLDIYSGESYSVLLKTSQDSSQNYWIS 319
Query: 309 AGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL--MGSP 366
GVRGR+P TP ALT+LNY SASK+PLSPPP+TPRWDDY HSK+FSNKI AL P
Sbjct: 320 FGVRGREPHTPQALTILNYKTNSASKLPLSPPPVTPRWDDYAHSKAFSNKIKALDHKSIP 379
Query: 367 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 426
KP +HRR+ LLNTQN +NG+TKW+INNVSL++P TPYLGSI++GL+DAFDQ PPE+F
Sbjct: 380 KPSPTYHRRIVLLNTQNKMNGYTKWSINNVSLSIPATPYLGSIRFGLRDAFDQTKPPEDF 439
Query: 427 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 486
YDVMKPPVN NTT GSGVYMLG +TVDVILQNANA+ N+SEIHPWHLHGHDFWVL
Sbjct: 440 PGHYDVMKPPVNPNTTTGSGVYMLGYYSTVDVILQNANALTENVSEIHPWHLHGHDFWVL 499
Query: 487 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 546
G GEGKFTK DEKKFNLKNPP +NTAVIFPYGWTALRFVADNPG WAFHCHIEPH H+GM
Sbjct: 500 GYGEGKFTKSDEKKFNLKNPPYRNTAVIFPYGWTALRFVADNPGVWAFHCHIEPHLHLGM 559
Query: 547 GVVLALGVETVGNIPNQALACGLTGKRFM 575
GVV A GV+ V IP +AL+CGLTGKRFM
Sbjct: 560 GVVFAEGVQHVAKIPKEALSCGLTGKRFM 588
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059236|ref|XP_002299782.1| predicted protein [Populus trichocarpa] gi|222847040|gb|EEE84587.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/561 (76%), Positives = 481/561 (85%), Gaps = 3/561 (0%)
Query: 17 LMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVEL 76
++ CS TS + YKWEVEYM+WSPD E++VMGINGQFPGPTIRARAGD + V+L
Sbjct: 1 MIQCSS-ATSNKTGNHFYKWEVEYMYWSPDGIENVVMGINGQFPGPTIRARAGDIVHVQL 59
Query: 77 TNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLG 136
TNKL+TEGVVIHWHGIRQ GTPWADGTASISQC INPGET+ YRF VD+AGTYFYHGH G
Sbjct: 60 TNKLHTEGVVIHWHGIRQKGTPWADGTASISQCVINPGETFDYRFTVDRAGTYFYHGHYG 119
Query: 137 MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 196
MQRSAGLYGS+IVDVA+GEKEPFHYDGEF+LLLSDWWH+SVH QEVGLSSRP+RWI EPQ
Sbjct: 120 MQRSAGLYGSMIVDVAEGEKEPFHYDGEFDLLLSDWWHKSVHHQEVGLSSRPMRWINEPQ 179
Query: 197 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASL 256
LLINGRGQ+ CSLAAH N S QC + G+EQ AP ILHV PNKTYR+RIASTTALASL
Sbjct: 180 ALLINGRGQYGCSLAAHHGNSSFSQCNITGHEQWAPYILHVDPNKTYRIRIASTTALASL 239
Query: 257 NLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP 316
NLA+ NHKM+VVEADGNY+QPFE +D+DIYSGESYSVLL T+QD S NYWIS GVRGR+P
Sbjct: 240 NLAIGNHKMMVVEADGNYLQPFETNDLDIYSGESYSVLLKTSQDSSQNYWISFGVRGREP 299
Query: 317 ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL--MGSPKPPTNFHR 374
TP ALT+LNY SASK+PLSPPP+TPRWDDY HSK+FSNKI AL PKP +HR
Sbjct: 300 HTPQALTILNYKTNSASKLPLSPPPVTPRWDDYAHSKAFSNKIKALDHKSIPKPSPTYHR 359
Query: 375 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMK 434
R+ LLNTQN +NG+TKW+INNVSL++P TPYLGSI++GL+ AFDQ PPE+F YDVMK
Sbjct: 360 RIVLLNTQNKMNGYTKWSINNVSLSIPATPYLGSIRFGLRGAFDQTKPPEDFPGHYDVMK 419
Query: 435 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 494
PPVN NTT GSGVYMLG +TVDVILQNANA+ N+SEIHPWHLHGHDFWVLG GEGKFT
Sbjct: 420 PPVNPNTTTGSGVYMLGYYSTVDVILQNANALTENVSEIHPWHLHGHDFWVLGYGEGKFT 479
Query: 495 KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554
K DEKKFNLKNPP +NTAVIFPYGWTALRFVADNPG WAFHCHIEPH H+GMGVV A GV
Sbjct: 480 KSDEKKFNLKNPPYRNTAVIFPYGWTALRFVADNPGVWAFHCHIEPHLHLGMGVVFAEGV 539
Query: 555 ETVGNIPNQALACGLTGKRFM 575
+ V IP +AL+CGLTGKRFM
Sbjct: 540 QHVAKIPKEALSCGLTGKRFM 560
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102875|ref|XP_002312838.1| l-ascorbate oxidase precursor [Populus trichocarpa] gi|222849246|gb|EEE86793.1| l-ascorbate oxidase precursor [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/575 (75%), Positives = 496/575 (86%), Gaps = 9/575 (1%)
Query: 9 AVVVTCWILML--CSVFETSYGSKTRH---YKWEVEYMFWSPDCKESIVMGINGQFPGPT 63
++V C +L L CS+ T+ +KTR YKWEVEYM+WSPD E++VMGING+FPGPT
Sbjct: 18 GLIVWCILLSLTQCSL-ATATSNKTRSLHFYKWEVEYMYWSPDGLENVVMGINGKFPGPT 76
Query: 64 IRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV 123
IRARAGDT+ V LTNKL+TEGVVIHWHGIRQ GTPWADGTASISQC INPGE++ YRF V
Sbjct: 77 IRARAGDTVHVHLTNKLHTEGVVIHWHGIRQKGTPWADGTASISQCAINPGESFDYRFTV 136
Query: 124 DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG 183
D+AGTYFYHGH GMQRSAGLYGSLIVDVA+GEKEPFHYDGEF+LLLSDWWH S H QEVG
Sbjct: 137 DRAGTYFYHGHYGMQRSAGLYGSLIVDVAEGEKEPFHYDGEFDLLLSDWWHESAHHQEVG 196
Query: 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA-EQCKLRGNEQCAPQILHVQPNKT 242
LSSRP+RWIGEPQTLL+NGRGQ+ CSLAAH+SN S+ QC + G+EQ AP ILHV PNKT
Sbjct: 197 LSSRPMRWIGEPQTLLVNGRGQYGCSLAAHYSNNSSLSQCNVTGHEQWAPYILHVDPNKT 256
Query: 243 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 302
YR+R++STTALASLNLA+ NHKM+VVEADGNY+QPFE DD+DIYSGESYSVLL T+QDPS
Sbjct: 257 YRIRLSSTTALASLNLAIGNHKMLVVEADGNYLQPFETDDLDIYSGESYSVLLKTSQDPS 316
Query: 303 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 362
NYWIS GVRGRKP TP ALT+LNY SASK PLSPPP+TPRWDDY HSK+F+NK+ AL
Sbjct: 317 QNYWISFGVRGRKPQTPQALTILNYKTNSASKFPLSPPPVTPRWDDYAHSKAFTNKVKAL 376
Query: 363 MGS--PKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 420
PKPP+ +HRR+ LLNTQN +NG+TKW+INNVSL+LP TPYLGSI++GL++ FDQ
Sbjct: 377 DHKTIPKPPSTYHRRIILLNTQNKMNGYTKWSINNVSLSLPATPYLGSIRFGLQNGFDQT 436
Query: 421 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 480
PPE+F +YDVMKPP N NTT G+GVYML +TVDVILQNANA+ N+SEIHPWHLHG
Sbjct: 437 KPPESFPVQYDVMKPPGNPNTTTGNGVYMLSYYSTVDVILQNANALAENVSEIHPWHLHG 496
Query: 481 HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 540
HDFWVLG GEGKFTK+DEKKFN+KNPP +N+AVIFPYGWTALRFVADNPG WAFHCHIEP
Sbjct: 497 HDFWVLGYGEGKFTKDDEKKFNMKNPPYRNSAVIFPYGWTALRFVADNPGVWAFHCHIEP 556
Query: 541 HFHIGMGVVLALGVETVGNIPNQALACGLTGKRFM 575
H H+GMGVVLA GV+ + IP +AL+CGLTGK+FM
Sbjct: 557 HLHMGMGVVLAEGVQRLPKIPKEALSCGLTGKKFM 591
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2493321|sp|Q40588.1|ASO_TOBAC RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase; Flags: Precursor gi|599594|dbj|BAA07734.1| ascorbate oxidase precursor [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/553 (76%), Positives = 473/553 (85%), Gaps = 1/553 (0%)
Query: 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVI 87
+KTRH+KW+VEY+ WSPD +ES+VMGINGQFPGPTIRA+AGDT+AV LTNKL+TEGVVI
Sbjct: 27 AAKTRHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVI 86
Query: 88 HWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSL 147
HWHGIRQ+GTPWADGTA+ISQC INPGET+LYRFKVDKAGTYFYHGH GMQRSAGLYGSL
Sbjct: 87 HWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKVDKAGTYFYHGHYGMQRSAGLYGSL 146
Query: 148 IVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFN 207
IV+V +GEKEPFHYDGEFNLLLSDWWH+ HEQEV LSS PLRWIGEPQTLL+NGRGQ+N
Sbjct: 147 IVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDLSSNPLRWIGEPQTLLLNGRGQYN 206
Query: 208 CSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV 267
CSLAA FS QCKLRG EQ APQIL V+PNK YRLR+ASTTAL SL+LA+ HKMVV
Sbjct: 207 CSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVV 266
Query: 268 VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNY 327
VEADGNYVQPF V DMDIYSGESYSVL T+QDP+ NYWIS VRGR+P TP LTLLNY
Sbjct: 267 VEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLNY 326
Query: 328 HPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 387
P SASK P PPPI P W+DY+HSKSFSNKIFALMGSPKPP HRR+ LLNTQN I+G
Sbjct: 327 LPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQNKIDG 386
Query: 388 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 447
+TKWAINNVSL LP YLGSI+YG+ +AFD PP+NF +YDV+K N+N+T G+GV
Sbjct: 387 YTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGV 445
Query: 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP 507
YML NTT+D+ILQNANA+ ++SEIHPWHLHGHDFWVLG GEGKF+++D KKFNLKNPP
Sbjct: 446 YMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPP 505
Query: 508 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALAC 567
L+NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+GMGV+ A GV V IP +ALAC
Sbjct: 506 LRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIPKEALAC 565
Query: 568 GLTGKRFMNPKQN 580
GLTGK M+ K N
Sbjct: 566 GLTGKMLMSNKHN 578
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578674|ref|XP_002530197.1| l-ascorbate oxidase, putative [Ricinus communis] gi|223530290|gb|EEF32187.1| l-ascorbate oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/581 (72%), Positives = 488/581 (83%), Gaps = 8/581 (1%)
Query: 2 GLGLRHVAVVVTCWILMLCSVFETSYGSKT-----RH-YKWEVEYMFWSPDCKESIVMGI 55
G R ++V+ C + L S+ + S GS RH YKW+VEYMFWSPDC+E++VMGI
Sbjct: 7 GGSYRIKSLVLVC--VFLSSLIKASLGSSNVNGGNRHFYKWDVEYMFWSPDCEENVVMGI 64
Query: 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGE 115
NGQFPGPTIRA AGD I +ELTNKL+TEGVVIHWHGIRQLGTPWADGTA+ISQC INPGE
Sbjct: 65 NGQFPGPTIRAHAGDYIHIELTNKLHTEGVVIHWHGIRQLGTPWADGTAAISQCAINPGE 124
Query: 116 TYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHR 175
T+ YRF VD+ GTYFYHGH GMQRSAGLYGSLIVDVA+G+KEPF YDGEF+LLLSDWWH
Sbjct: 125 TFTYRFIVDRPGTYFYHGHYGMQRSAGLYGSLIVDVAEGQKEPFKYDGEFDLLLSDWWHE 184
Query: 176 SVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 235
+VH QEVGLSS P+RWIGEPQT+L+NGRGQ+NCSLAA +S +QCKL+G E CAP I
Sbjct: 185 NVHHQEVGLSSSPMRWIGEPQTILMNGRGQYNCSLAAVYSRNPTQQCKLKGGENCAPFIF 244
Query: 236 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLL 295
HV+P K YRLRIASTTALASLNLA+ HKM+VVEADGNYV+PFE D +DIYSGESYSV++
Sbjct: 245 HVEPKKKYRLRIASTTALASLNLAIDGHKMLVVEADGNYVKPFETDSLDIYSGESYSVII 304
Query: 296 TTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSF 355
TTNQ P NYWISAGV GR+P TP LTLL+Y+ TSASK+P SPPP+TPRW+D SK+F
Sbjct: 305 TTNQHPYQNYWISAGVIGREPHTPQGLTLLHYNQTSASKLPESPPPVTPRWNDTARSKAF 364
Query: 356 SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKD 415
+NKI A G+ PP N+ RR+ LLNTQN NG TKWAINNVSL+LP TPYLG++K+GL++
Sbjct: 365 TNKILAKKGTQPPPKNYDRRIILLNTQNKYNGHTKWAINNVSLSLPATPYLGAMKFGLRN 424
Query: 416 AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 475
AFDQ PPE + YDVMKP N NTT+GSGVY +G TTVDVILQNANA+ ++SE+HP
Sbjct: 425 AFDQEKPPEKYDESYDVMKPAANPNTTVGSGVYTIGYQTTVDVILQNANALSKDVSEVHP 484
Query: 476 WHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 535
WHLHGHDFWVLG GEGKFT++DEKKFNLKNPPL+NTAVIFPYGWTALRFVADNPG WAFH
Sbjct: 485 WHLHGHDFWVLGYGEGKFTEKDEKKFNLKNPPLRNTAVIFPYGWTALRFVADNPGVWAFH 544
Query: 536 CHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMN 576
CHIEPH H+GMGVV A G+E V +IP++ALACGLTG+RFM+
Sbjct: 545 CHIEPHLHMGMGVVFAEGIEHVKDIPHEALACGLTGRRFMD 585
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2827764|sp|P24792.2|ASO_CUCMA RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase; Flags: Precursor gi|885589|dbj|BAA09528.1| ascorbate oxidase [Cucurbita maxima] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/552 (72%), Positives = 457/552 (82%), Gaps = 1/552 (0%)
Query: 25 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEG 84
+S GS+ RHYKWEVEYMFW+PDC E+IVMGINGQFPGPTIRA AGDT+ VEL NKL+TEG
Sbjct: 27 SSEGSQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEG 86
Query: 85 VVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLY 144
VVIHWHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLY
Sbjct: 87 VVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLY 146
Query: 145 GSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRG 204
GSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRG
Sbjct: 147 GSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRG 206
Query: 205 QFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264
QF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH
Sbjct: 207 QFDCSIAAKY-DSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHP 265
Query: 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324
++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G RGR P TPP LTL
Sbjct: 266 LLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTL 325
Query: 325 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 384
LNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP +RR+ LLNTQN
Sbjct: 326 LNYLPNSVSKLPTSPPPETPAWDDFDRSKNFTYRITAAMGSPKPPVKSNRRIFLLNTQNV 385
Query: 385 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 444
ING+ KWAIN+VSL LPPTPYLG++K+ L AFDQN PPE F +YD+ PP N T +G
Sbjct: 386 INGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIG 445
Query: 445 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLK 504
+GVY + VDVILQNAN ++ NLSEIHPWHLHGHDFWVLG G+GKFT E+E NLK
Sbjct: 446 NGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLK 505
Query: 505 NPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQA 564
NPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +A
Sbjct: 506 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKA 565
Query: 565 LACGLTGKRFMN 576
LACG T K +N
Sbjct: 566 LACGGTAKSLIN 577
|
Source: Cucurbita maxima Species: Cucurbita maxima Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|543859|sp|P37064.1|ASO_CUCPM RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase gi|442635|pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution gi|442636|pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution gi|493837|pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493838|pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493839|pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-forms gi|493840|pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-forms gi|493841|pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493842|pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms | Back alignment and taxonomy information |
|---|
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/552 (71%), Positives = 457/552 (82%), Gaps = 1/552 (0%)
Query: 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
S+ RHYKWEVEYMFW+P+C E+IVMGINGQFPGPTIRA AGD++ VELTNKL+TEGVVIH
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLI 148
WHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLYGSLI
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLI 120
Query: 149 VDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 208
VD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRGQF+C
Sbjct: 121 VDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC 180
Query: 209 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268
S+AA + + + E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH+++VV
Sbjct: 181 SIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239
Query: 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328
EADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY
Sbjct: 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYL 299
Query: 329 PTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 388
P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR+ LLNTQN ING+
Sbjct: 300 PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359
Query: 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 448
KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ PP N T +G+GVY
Sbjct: 360 VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVY 419
Query: 449 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508
+ VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+ E+E NLKNPPL
Sbjct: 420 QFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479
Query: 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568
+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG
Sbjct: 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACG 539
Query: 569 LTGKRFMNPKQN 580
T K +N +N
Sbjct: 540 GTAKSLINNPKN 551
|
Source: Cucurbita pepo var. melopepo Species: Cucurbita pepo Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356575058|ref|XP_003555659.1| PREDICTED: L-ascorbate oxidase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/567 (70%), Positives = 464/567 (81%), Gaps = 2/567 (0%)
Query: 9 AVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARA 68
A+ V C I + + E S G RHYK++VEYM PDC E ++MGINGQFPGPTIRA
Sbjct: 5 ALFVGCIIWL--GLVELSIGGIVRHYKFDVEYMIRKPDCLEHVLMGINGQFPGPTIRAEV 62
Query: 69 GDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGT 128
GD + + LTNKL+TEG VIHWHGIRQ+GTPWADGTASISQC INPGET+ Y+F VD+ GT
Sbjct: 63 GDILDIALTNKLFTEGTVIHWHGIRQVGTPWADGTASISQCAINPGETFHYKFTVDRPGT 122
Query: 129 YFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRP 188
YFYHGH GMQR+AGLYGSLIVD+ G+ EPFHYDGEFNLL SD WH S HEQEVGLS++P
Sbjct: 123 YFYHGHHGMQRAAGLYGSLIVDLPKGQNEPFHYDGEFNLLFSDLWHTSSHEQEVGLSTKP 182
Query: 189 LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIA 248
L+WIGEPQTLLINGRGQFNCSLA+ F N + +C+ +G E+CAPQILHV+PNKTYR+RIA
Sbjct: 183 LKWIGEPQTLLINGRGQFNCSLASKFINTTLPECQFKGGEECAPQILHVEPNKTYRIRIA 242
Query: 249 STTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 308
STT+LA+LNLA+ NHK+VVVEADGNYV PF VDD+DIYSGESYSVLL T+QDP+ NYW+S
Sbjct: 243 STTSLAALNLAISNHKLVVVEADGNYVTPFAVDDVDIYSGESYSVLLRTDQDPNKNYWLS 302
Query: 309 AGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP 368
GVRGRKP+T LT+LNY SAS P SPPPITP W+D++HSK+F+ KI A MG+P+P
Sbjct: 303 IGVRGRKPSTSQGLTILNYKTISASIFPTSPPPITPLWNDFEHSKAFTKKIIAKMGTPQP 362
Query: 369 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 428
P + RR+ LLNTQN ++GFTKW+INNVSLTLPPTPYLGSIK+ + +AFDQ PP NF
Sbjct: 363 PKLYDRRVFLLNTQNRVDGFTKWSINNVSLTLPPTPYLGSIKFKINNAFDQTPPPMNFPQ 422
Query: 429 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 488
+YD+ PPVN N T+G+GVYM LN VDVILQN+N + N SEIHPWHLHGHDFWVLG
Sbjct: 423 DYDIFNPPVNPNATIGNGVYMFNLNEVVDVILQNSNQLSVNGSEIHPWHLHGHDFWVLGY 482
Query: 489 GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548
GEGKF DEKKFNL + PL+NTAVIFPYGWTALRF ADNPG WAFHCHIEPH H+GMGV
Sbjct: 483 GEGKFKLGDEKKFNLTHAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGV 542
Query: 549 VLALGVETVGNIPNQALACGLTGKRFM 575
+ A GV VG IP +AL CGLTGK+ +
Sbjct: 543 IFAEGVHKVGKIPREALTCGLTGKKLV 569
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 580 | ||||||
| TAIR|locus:505006625 | 588 | AT5G21105 [Arabidopsis thalian | 0.975 | 0.962 | 0.630 | 8e-211 | |
| TAIR|locus:2178973 | 573 | AT5G21100 [Arabidopsis thalian | 0.968 | 0.980 | 0.609 | 1.5e-195 | |
| TAIR|locus:2135242 | 582 | AT4G39830 [Arabidopsis thalian | 0.968 | 0.965 | 0.489 | 3e-149 | |
| TAIR|locus:2153469 | 565 | LAC12 "laccase 12" [Arabidopsi | 0.881 | 0.904 | 0.305 | 8.1e-60 | |
| TAIR|locus:2042842 | 558 | IRX12 "IRREGULAR XYLEM 12" [Ar | 0.894 | 0.930 | 0.320 | 1.9e-58 | |
| TAIR|locus:2143563 | 557 | LAC11 "laccase 11" [Arabidopsi | 0.887 | 0.924 | 0.299 | 2.5e-58 | |
| TAIR|locus:2154518 | 566 | LAC16 "laccase 16" [Arabidopsi | 0.929 | 0.952 | 0.316 | 4.6e-57 | |
| ASPGD|ASPL0000063817 | 580 | AN7389 [Emericella nidulans (t | 0.632 | 0.632 | 0.272 | 2.1e-56 | |
| TAIR|locus:2150139 | 558 | LAC10 "laccase 10" [Arabidopsi | 0.894 | 0.930 | 0.315 | 2.3e-55 | |
| TAIR|locus:2168128 | 577 | LAC17 "laccase 17" [Arabidopsi | 0.284 | 0.285 | 0.356 | 7.4e-55 |
| TAIR|locus:505006625 AT5G21105 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2038 (722.5 bits), Expect = 8.0e-211, P = 8.0e-211
Identities = 358/568 (63%), Positives = 432/568 (76%)
Query: 15 WILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAV 74
WI+++ +V + + R Y WEVEY +WSPDCKE VM +NG+FPGPTI+A AGDTI V
Sbjct: 21 WIVLVVAVLTHTASAAVREYHWEVEYKYWSPDCKEGAVMTVNGEFPGPTIKAFAGDTIVV 80
Query: 75 ELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH 134
LTNKL TEG+VIHWHGIRQ G+PWADG A ++QC INPGET+ Y F V+K GT+FYHGH
Sbjct: 81 NLTNKLTTEGLVIHWHGIRQFGSPWADGAAGVTQCAINPGETFTYNFTVEKPGTHFYHGH 140
Query: 135 LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGE 194
GMQRSAGLYGSLIVDVA G+ E YDGEFNLLLSDWWH ++ QE+GLSS+P+RWIGE
Sbjct: 141 YGMQRSAGLYGSLIVDVAKGKSERLRYDGEFNLLLSDWWHEAIPSQELGLSSKPMRWIGE 200
Query: 195 PQTLLINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXX 253
Q++LINGRGQFNCSLAA FSN S C + +QCAPQILHV+PNKTYR+R+
Sbjct: 201 AQSILINGRGQFNCSLAAQFSNNTSLPMCTFKEGDQCAPQILHVEPNKTYRIRLSSTTAL 260
Query: 254 XXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313
V+ HK+VVVEADGNY+ PF DD+DIYSGESYSVLLTT+QDPS NY+IS GVRG
Sbjct: 261 ASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRG 320
Query: 314 RKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 373
RKP T ALT+LNY ASK+P SPPP+TPRWDD++ SK+FS KIF+ MGSP PP +
Sbjct: 321 RKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSPPKKYR 380
Query: 374 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 433
+RL LLNTQN I+G+TKWAINNVSL P TPYLGS+KY LK F++ PP ++ +YD+M
Sbjct: 381 KRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIM 440
Query: 434 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF 493
PP NTT G+G+Y+ N TVDVI+QNAN ++ +SEIHPWHLHGHDFWVLG G+GKF
Sbjct: 441 NPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFWVLGYGDGKF 500
Query: 494 TKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552
DE TA+++PYGWTA+RFV DNPG W FHCHIEPH H+GMGVV A
Sbjct: 501 KPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAE 560
Query: 553 GVETVGNIPNQALACGLTGKRFMNPKQN 580
G+ +G +P++AL CGLT + MN +N
Sbjct: 561 GLNRIGKVPDEALGCGLTKQFLMNRNRN 588
|
|
| TAIR|locus:2178973 AT5G21100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 348/571 (60%), Positives = 412/571 (72%)
Query: 11 VVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGD 70
V+ W+L + V S + WEVEY +W PDCKE IVM INGQFPGPTI A AGD
Sbjct: 3 VIVWWLLTVVVVAFHSASAAVVESTWEVEYKYWWPDCKEGIVMAINGQFPGPTIDAVAGD 62
Query: 71 TIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYF 130
T+ + + NKL TEGVVIHWHGIRQ GTPWADG A ++QCPINPGET+ Y+F VDKAGT+F
Sbjct: 63 TVIIHVVNKLSTEGVVIHWHGIRQKGTPWADGAAGVTQCPINPGETFTYKFIVDKAGTHF 122
Query: 131 YHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLR 190
YHGH GMQRS+GLYG LIV KE YDGEFNLLLSDWWH+S+H QE+ LSSRP+R
Sbjct: 123 YHGHYGMQRSSGLYGMLIVR---SPKERLIYDGEFNLLLSDWWHQSIHAQELALSSRPMR 179
Query: 191 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ-CKLRGNEQCAPQILHVQPNKTYRLRIXX 249
WIGEPQ+LLINGRGQFNCS AA+F+ G + C + N+QCAPQ L V+PN+ YRLRI
Sbjct: 180 WIGEPQSLLINGRGQFNCSQAAYFNKGGEKDVCTFKENDQCAPQTLRVEPNRVYRLRIAS 239
Query: 250 XXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309
V+ H++VVVEADGNYV PF V+D+D+YSGE+YSVLL TN PS YWIS
Sbjct: 240 TTALASLNLAVQGHQLVVVEADGNYVAPFTVNDIDVYSGETYSVLLKTNALPSKKYWISV 299
Query: 310 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPP 369
GVRGR+P TP ALT++NY + S+ P PPP+TP W+D D SKSFS KIFA G PKPP
Sbjct: 300 GVRGREPKTPQALTVINYVDATESR-PSHPPPVTPIWNDTDRSKSFSKKIFAAKGYPKPP 358
Query: 370 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF-SN 428
H +L LLNTQN +TKW+INNVSL++P TPYLGSI+YGLK A+D P + +
Sbjct: 359 EKSHDQLILLNTQNLYEDYTKWSINNVSLSVPVTPYLGSIRYGLKSAYDLKSPAKKLIMD 418
Query: 429 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 488
YD+MKPP N NTT GSG+Y VDVILQNAN ++ +SEIHPWH+HGHDFWVLG
Sbjct: 419 NYDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHDFWVLGY 478
Query: 489 GEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMG 547
GEGKF DE T V++P+GWTA+RFV DNPG W FHCHIEPH H+GMG
Sbjct: 479 GEGKFKPGIDEKTFNLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPHLHMGMG 538
Query: 548 VVLALGVETVGN--IPNQALACGLTGKRFMN 576
VV GV+ +G IP++AL CGLT K MN
Sbjct: 539 VVFVEGVDRIGKMEIPDEALGCGLTRKWLMN 569
|
|
| TAIR|locus:2135242 AT4G39830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 282/576 (48%), Positives = 365/576 (63%)
Query: 7 HVA-VVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIR 65
HV ++V C+I + S K R +KWEV+Y F SPDC E +V+ ING+FPGPTI+
Sbjct: 12 HVFNLMVLCFIALFFS--SVLCQGKIRRFKWEVKYEFKSPDCFEKLVITINGKFPGPTIK 69
Query: 66 ARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK 125
A+ GDTI VEL N TE V +HWHGIRQ+GTPW DG ++QCPI PGE ++Y+F VD+
Sbjct: 70 AQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEGVTQCPILPGEVFIYQFVVDR 129
Query: 126 AGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 185
GTY YH H GMQR +GL G + V E EPF YD + N LL+DW+H+S+ E+ GL+
Sbjct: 130 PGTYMYHSHYGMQRESGLIGMIQVSPPATEPEPFTYDYDRNFLLTDWYHKSMSEKATGLA 189
Query: 186 SRPLRWIGEPQTLLINGRGQFNCS--LAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 243
S P +W+GEPQ+L+I GRG+FNCS L S S C + N C+ IL V P KTY
Sbjct: 190 SIPFKWVGEPQSLMIQGRGRFNCSNNLTTPPSLVSGV-CNV-SNADCSRFILTVIPGKTY 247
Query: 244 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 303
RLRI ++ H + VVEADG+YV+PF V ++ +YSGE+YSVLL +Q+P
Sbjct: 248 RLRIGSLTALSALSFQIEGHNLTVVEADGHYVEPFTVKNLFVYSGETYSVLLKADQNPRR 307
Query: 304 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPP--ITPRWDDYDHSKSFSNKIFA 361
NYWI++ + R TPPA +LNY+P + P + I P W+D + S I A
Sbjct: 308 NYWITSSIVSRPATTPPATAVLNYYPNHPRRRPPTSESSNIVPEWNDTRSRLAQSLAIKA 367
Query: 362 LMGSPKP-PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 420
G P N + + LLNTQN +NG+ +W++NNVS P TPYL ++K L +AFD
Sbjct: 368 RRGFIHALPENSDKVIVLLNTQNEVNGYRRWSVNNVSYHHPKTPYLIALKQNLTNAFDWR 427
Query: 421 -GPPENF-SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHL 478
PEN+ S YD+ P+NAN T G+Y L N+TVDVILQNAN + N SE HPWHL
Sbjct: 428 FTAPENYDSRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHL 487
Query: 479 HGHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCH 537
HGHDFWVLG GEGKF + ED T + P+GWTALRF ADNPG W+FHCH
Sbjct: 488 HGHDFWVLGYGEGKFNESEDPKRYNRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCH 547
Query: 538 IEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKR 573
IE HF +GMG+V G++ V ++P+ + CG T KR
Sbjct: 548 IESHFFMGMGIVFESGIDKVSSLPSSIMGCGQT-KR 582
|
|
| TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 176/577 (30%), Positives = 273/577 (47%)
Query: 16 ILMLCSVFETSYG-SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAV 74
+L CS+F S +K +H+ + ++ CK + +NG FPGPT+ GDT+ V
Sbjct: 10 LLFFCSLFSASLIIAKVQHHDFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNNGDTLEV 69
Query: 75 ELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHG 133
++ N+ + IHWHG+RQ+ T WADG ++QCPI PG++Y YRF + + GT ++H
Sbjct: 70 KVHNRA-RYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGTLWWHA 128
Query: 134 HLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRS---VHEQEVGLSSRPL 189
H R A +YG+LI+ G PF D + L+L +WW+ + V Q + P
Sbjct: 129 HSSWLR-ATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVINQATRTGAAPN 187
Query: 190 RWIGEPQTLLINGR-GQ-FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRI 247
I + T ING+ G +NCS + E ++ + +T LR+
Sbjct: 188 --ISDAYT--INGQPGDLYNCS--------TKETV-----------VVPINSGETSLLRV 224
Query: 248 XXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 307
V NHK+ VV AD +Y++PF + + G++ VLLT +Q P Y
Sbjct: 225 INAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPKRYYIA 284
Query: 308 SAGVRGRKPA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 364
+ + + A +L Y T+ + P+ P + P ++D + SFS K +L
Sbjct: 285 ARAYQSAQNAPFDNTTTTAILQYKKTTTTSKPIMP--VLPAFNDTNTVTSFSRKFKSLRN 342
Query: 365 SPKPPT-NFHRRLTL-LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD---- 418
P T + + T+ L N F K ++ T T + ++ + L F
Sbjct: 343 VVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQGLNGTRF-TASMNNVSFVLPSNFSLLQA 401
Query: 419 -QNGPPENFSNEYDVMKPPV-------NANTTL-----GSGVYMLGLNTTVDVILQNANA 465
NG P F+ ++ KPPV N + L G+ +Y L + V V+LQ+ N
Sbjct: 402 HSNGIPGVFTTDFP-SKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNI 460
Query: 466 IRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRF 524
+ SE HP HLHG+DF+++G G G F K+D T + GW +RF
Sbjct: 461 VT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRF 517
Query: 525 VADNPGAWAFHCHIEPHFHIGMGVVLALGVET-VGNI 560
VADNPG W HCH++ HI G+ +A V+ VG +
Sbjct: 518 VADNPGVWLMHCHLD--VHIKWGLAMAFLVDNGVGEL 552
|
|
| TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 184/574 (32%), Positives = 270/574 (47%)
Query: 15 WILMLCS---VFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDT 71
W L L S VF S RHYK+ V + C + +NG++PGPTI AR DT
Sbjct: 7 WFLFLVSFFSVFPAPSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIYAREDDT 66
Query: 72 IAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYF 130
+ +++ N + V IHWHG+RQ+ T WADG A I+QCPI PG+ Y Y + + + GT +
Sbjct: 67 LLIKVVNHV-KYNVSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLW 125
Query: 131 YHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPL 189
+H H+ R A +YG+L++ G PF D E ++L +WW +S E + + +
Sbjct: 126 WHAHILWLR-ATVYGALVILPKRGVPYPFPKPDNEKVIVLGEWW-KSDTENIINEALKSG 183
Query: 190 RWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXX 249
+ +ING H G C +G + L V+ KTY LR+
Sbjct: 184 LAPNVSDSHMING----------H--PGPVRNCPSQGYK------LSVENGKTYLLRLVN 225
Query: 250 XXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309
V H VVE D YV+PF+ D + I G++ +VLLT ++ Y ++A
Sbjct: 226 AALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAG-KYLVTA 284
Query: 310 GVRGRKPATPPALTL---LNYHPT-SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS 365
P +T ++Y T S+S L+ PP P+ + + +F+N + +L
Sbjct: 285 SPFMDAPIAVDNVTATATVHYSGTLSSSPTILTLPP--PQ-NATSIANNFTNSLRSLNSK 341
Query: 366 PKP---PTNFHRRL--TL---LNTQNTI---NGFTKWA-INNVSLTLPPTPYLGSIKYGL 413
P PT L T+ LN T NG A INNV+ +P T L + +
Sbjct: 342 KYPALVPTTIDHHLFFTVGLGLNACPTCKAGNGSRVVASINNVTFIMPKTALLPAHYFNT 401
Query: 414 KDAFDQNGPPENFSNEYDVMKPPV-NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 472
F + P +N + ++ V N T G+ +Y L N TV ++LQ+ I P E
Sbjct: 402 SGVFTTDFP-KNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQDTGVIAP---E 457
Query: 473 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGA 531
HP HLHG +F+ +GRG G F + + P G W +RF ADNPG
Sbjct: 458 NHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGV 517
Query: 532 WAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 565
W HCH+E H G+ +A VE G PNQ++
Sbjct: 518 WFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548
|
|
| TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 170/567 (29%), Positives = 275/567 (48%)
Query: 14 CWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIA 73
C++L + + + Y+++V+ S C ++ +NG FPGPT+ AR GD +
Sbjct: 10 CYLLAFLGY--SPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDRVI 67
Query: 74 VELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYH 132
+ +TN + + IHWHG++Q WADG A I+QCPI G++YLY F V + GT ++H
Sbjct: 68 INVTNHVQYN-MSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGTLWWH 126
Query: 133 GHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRW 191
H+ R A +YG++++ A G+ PF E N++L +WW++ V E V +++
Sbjct: 127 AHILWLR-ATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDV-ETAVNQANQ---- 180
Query: 192 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXX 251
+G P + AH NG L + ++ + KTY LRI
Sbjct: 181 LGAPPPMS-----------DAHTINGKPGP--LFPCSEKHTFVIEAEAGKTYLLRIINAA 227
Query: 252 XXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311
+ H M VVE D Y +PF + + G++ +VL+ T++ P+ Y+++A
Sbjct: 228 LNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTTNVLVKTDRSPN-RYFMAASP 286
Query: 312 RGRKPATPPALT---LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP 368
P + T +L Y + +P+ P P +D + ++ K+ +L P
Sbjct: 287 FMDAPVSVDNKTVTAILQYKGVPNTVLPILPKLPLP--NDTSFALDYNGKLKSLNTPNFP 344
Query: 369 ---PTNFHRRL--TL---LNTQNT-INGFTKWA-INNVSLTLPPTPYLGSIKYGLKDAF- 417
P RRL T+ +N T +NG A INN++ +P T L + + F
Sbjct: 345 ALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFIMPKTALLKAHYSNISGVFR 404
Query: 418 -D-QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 475
D + PP+ F+ Y + N T+ G+ + + NTT++++LQ+ N + E HP
Sbjct: 405 TDFPDRPPKAFN--YTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLTV---ESHP 459
Query: 476 WHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAF 534
+HLHG++F+V+G G G F K+D T + GW A+RF ADNPG W
Sbjct: 460 FHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFM 519
Query: 535 HCHIEPHFHIGMGVVLALGVETVGNIP 561
HCH+E H G+ +A VE G P
Sbjct: 520 HCHLE--VHTMWGLKMAFVVEN-GETP 543
|
|
| TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 184/582 (31%), Positives = 274/582 (47%)
Query: 1 MGLGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFP 60
M + R V+T ++ +L S T+ S RHYK+ V + C ++ +NGQFP
Sbjct: 1 MEIPRRFCICVLTFFVFVLLS--PTTVHSIIRHYKFNV-MTNTTKLCSSKPIVTVNGQFP 57
Query: 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYR 120
GPTI AR GDTI +++ N + V IHWHGIRQL T WADG A I+QCPI PG+ YL+
Sbjct: 58 GPTIVAREGDTILIKVVNHV-KYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHN 116
Query: 121 FKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVH 178
F + + GT ++H H+ R A ++G++++ G PF E ++LS+WW V
Sbjct: 117 FTLTGQRGTLWWHAHILWLR-ATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDV- 174
Query: 179 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238
E+ + +SR ING + + S G +R + +I++
Sbjct: 175 EELINEASRIGTAPSASDAHTINGHSGSISNCPSQSSYG----LPVRAGKTYMLRIINAA 230
Query: 239 PNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDM----DIYSGESYSVL 294
N+ +I V + D ++ P + ++ + +G +Y V
Sbjct: 231 LNEELFFKIAGHVLTVVEVDAVYTKPY---KTDTVFIAPGQTTNVLLTANANAGSNYMVA 287
Query: 295 LTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 354
TT D Y V AT + + TS + S PP W ++S
Sbjct: 288 ATTFTDAHIPY---DNVTAT--ATLHYIGHTSTVSTSKKTVLASLPPQNATWVATKFTRS 342
Query: 355 FSNKIFALMGSPKPPTNFHRRL--TL-LNT---QNTINGFTKWA-INNVSLTLPPTPYLG 407
+ + +L + PT L T+ L Q+ NG A INNV+ T+P T L
Sbjct: 343 LRS-LNSLEYPARVPTTVEHSLFFTVGLGANPCQSCNNGVRLVAGINNVTFTMPKTALLQ 401
Query: 408 SIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNAN 464
+ + + F + P + SN YD P VNA T G+ +Y L N TV ++LQN
Sbjct: 402 AHFFNISGVFTDDFPAKP-SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTA 460
Query: 465 AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALR 523
I LS+ HP+HLHG +F+ +GRG G F E + V P G WTA+R
Sbjct: 461 MI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIR 517
Query: 524 FVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 565
F+ADNPG W HCH+E H G+ +A V+ G+ P+Q+L
Sbjct: 518 FIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556
|
|
| ASPGD|ASPL0000063817 AN7389 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 353 (129.3 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 117/430 (27%), Positives = 182/430 (42%)
Query: 151 VADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSL 210
V E P+HYD E +++SD++ E GL S W GE + +L+NG+ S
Sbjct: 149 VDSSEPAPYHYDEERTVMISDYFSEPDDEIVDGLVSTNFTWSGETEAILVNGQ-----SR 203
Query: 211 AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEA 270
A + G+ CKL + V+ KTYRLR +++H M ++EA
Sbjct: 204 PATNATGA---CKLAA--------ISVEAGKTYRLRFIGATALSFVSLAIESHHMHIIEA 252
Query: 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN------YWISAGVRGRKPATPPALTL 324
DG+Y +P E D + I SG+ YSVLLT + +++ R PA + +
Sbjct: 253 DGHYTKPLETDFLQIGSGQRYSVLLTAKGEDELKALDRRQFYLQITTLER-PAVLTSFAV 311
Query: 325 LNYHPTSA---SKIPLSPPPI----TPR-WDDYDHSKSFSNKIFALMGSPKPPTNFHRRL 376
L+Y +A + +P SPPP+ T + W DY+ + N+ F + RR+
Sbjct: 312 LDYTSDAAPDLTTVP-SPPPLPVATTVQGWLDYELEPAHPNEDFPTLDEVT------RRI 364
Query: 377 TLLNTQNTINGFTKWAINNVSL--TLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMK 434
+ QN ++ T W N + P +PYL I D N +D
Sbjct: 365 VIDVHQN-VSDRTIWLQNGYDWVESFPKSPYLVDIYQDRLDLDASYHRALTRGNGFD--- 420
Query: 435 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 494
N T + V ++++ QN + + HP+H HG F+ +G G+G +
Sbjct: 421 ---NITRTFPARV-----GEVLEIVWQNRGTVENGGVDAHPFHAHGRHFYDIGGGDGLYN 472
Query: 495 KE-DEXXXXXXXXXXXXTAVIFPY----------GWTALRFVADNPGAWAFHCHIEPHFH 543
+E T+V++ Y GW A R NPG W +HCH+ H
Sbjct: 473 ATANEIRLRGTHPIQRDTSVLYRYRSKTSQLVPSGWRAWRIRVTNPGVWMYHCHVLQHMI 532
Query: 544 IGMGVVLALG 553
+GM V G
Sbjct: 533 MGMQTVFTFG 542
|
|
| TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 180/571 (31%), Positives = 269/571 (47%)
Query: 16 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVE 75
+L F R Y + V + C ++ +NG+FPGPTI A DTI V
Sbjct: 9 VLFALLAFPACVHGAIRKYTFNVVTKQVTRICSTKQIVTVNGKFPGPTIYANEDDTILVN 68
Query: 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHGH 134
+ N + V IHWHGIRQL T WADG A I+QCPI PG +Y+Y F V + GT ++H H
Sbjct: 69 VVNNV-KYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGHSYVYNFTVTGQRGTLWWHAH 127
Query: 135 LGMQRSAGLYGSLIVDVADGEKEPFHYDG-EFNLLLSDWWHRSVHEQEVGLSSRPLRWIG 193
+ R A ++G++++ G PF E ++L +WW +S E V + +
Sbjct: 128 VLWLR-ATVHGAIVILPKLGLPYPFPKPHREEVIILGEWW-KSDTETVVNEALKSGLAPN 185
Query: 194 EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXX 253
+ING H G C +GN + A V+ KTY LR+
Sbjct: 186 VSDAHVING----------H--PGFVPNCPSQGNFKLA-----VESGKTYMLRLINAALN 228
Query: 254 XXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313
+ H+ VVE D YV+PF D + I G++ + L++ + PS Y I+A
Sbjct: 229 EELFFKIAGHRFTVVEVDAVYVKPFNTDTILIAPGQTTTALVSAAR-PSGQYLIAAAPFQ 287
Query: 314 RKPATP----PALTLLNYHPT-SASKIPL-SPPP--ITPRWDDYDHS-KSFSNKIFALMG 364
A ++Y T SA+ SPPP T + + +S +S ++K +
Sbjct: 288 DSAVVAVDNRTATATVHYSGTLSATPTKTTSPPPQNATSVANTFVNSLRSLNSKTYP--- 344
Query: 365 SPKPPTNFHRRL-TL---LNTQNTING--FTKW--AINNVSLTLPPTPYLGSIKYGLKDA 416
+ P T H L T+ +N ++ F++ AINN++ +P T L + + L
Sbjct: 345 ANVPITVDHDLLFTVGLGINRCHSCKAGNFSRVVAAINNITFKMPKTALLQAHYFNLTGI 404
Query: 417 FDQNGPPENFSNEYDVM-KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 475
+ + P + +D KPP N T + +Y L N+TV V+LQ+ + P E HP
Sbjct: 405 YTTDFPAKP-RRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHP 460
Query: 476 WHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAF 534
HLHG +F+V+G G G + +K+D T + GW A+RF ADNPG W
Sbjct: 461 IHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFM 520
Query: 535 HCHIEPHFHIGMGVVLALGVETVGNIPNQAL 565
HCH+E H G+ +A VE G PNQ++
Sbjct: 521 HCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548
|
|
| TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 7.4e-55, Sum P(3) = 7.4e-55
Identities = 62/174 (35%), Positives = 102/174 (58%)
Query: 3 LGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGP 62
+ L+ + V +C +L+L + ++G TRHY E++ + C ++ +NGQFPGP
Sbjct: 1 MALQLLLAVFSC-VLLLP---QPAFGI-TRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGP 55
Query: 63 TIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFK 122
+ AR GD + +++ N++ + +HWHGIRQL + WADG A I+QCPI G++Y+Y +
Sbjct: 56 KLIAREGDQVLIKVVNQV-PNNISLHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNYT 114
Query: 123 -VDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDG-EFNLLLSDWWH 174
V + GT +YH H+ RS +YG LI+ G PF E ++ +W++
Sbjct: 115 IVGQRGTLWYHAHISWLRST-VYGPLIILPKRGVPYPFAKPHKEVPMIFGEWFN 167
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P14133 | ASO_CUCSA | 1, ., 1, 0, ., 3, ., 3 | 0.7403 | 0.9327 | 0.9216 | N/A | no |
| Q40588 | ASO_TOBAC | 1, ., 1, 0, ., 3, ., 3 | 0.7613 | 0.9517 | 0.9550 | N/A | no |
| P24792 | ASO_CUCMA | 1, ., 1, 0, ., 3, ., 3 | 0.7210 | 0.95 | 0.9516 | N/A | no |
| P37064 | ASO_CUCPM | 1, ., 1, 0, ., 3, ., 3 | 0.7155 | 0.95 | 0.9981 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 580 | |||
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 0.0 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 0.0 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 0.0 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 1e-104 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 1e-85 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 1e-66 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 8e-62 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 2e-61 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 9e-60 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 5e-57 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 4e-55 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 4e-52 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 2e-47 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 8e-46 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 1e-35 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 1e-33 | |
| TIGR02376 | 311 | TIGR02376, Cu_nitrite_red, nitrite reductase, copp | 1e-14 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 2e-13 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 3e-07 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 0.001 | |
| PRK10883 | 471 | PRK10883, PRK10883, FtsI repressor; Provisional | 0.004 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 1050 bits (2718), Expect = 0.0
Identities = 415/541 (76%), Positives = 465/541 (85%), Gaps = 1/541 (0%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWH 90
RHYKWEVEY FWSPDC E +V+GINGQFPGPTIRA+AGDTI VELTNKL+TEGVVIHWH
Sbjct: 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWH 60
Query: 91 GIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150
GIRQ+GTPWADGTA ++QC INPGET++Y F VD+ GTYFYHGH GMQRSAGLYGSLIVD
Sbjct: 61 GIRQIGTPWADGTAGVTQCAINPGETFIYNFVVDRPGTYFYHGHYGMQRSAGLYGSLIVD 120
Query: 151 VADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSL 210
V DGEKEPFHYDGEFNLLLSDWWH+S+HEQEVGLSS+P+RWIGEPQ+LLINGRGQFNCSL
Sbjct: 121 VPDGEKEPFHYDGEFNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRGQFNCSL 180
Query: 211 AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270
AA FS+ + QC L+GNEQCAPQILHV+P KTYRLRIASTTALA+LN A++ HK+ VVEA
Sbjct: 181 AAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEA 240
Query: 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330
DGNYV+PF V D+DIYSGE+YSVLLTT+QDPS NYWIS GVRGRKP TPP LT+LNY+P
Sbjct: 241 DGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPN 300
Query: 331 SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 390
S S++P +PPP+TP WDD+D SK+FS I A MGSPKPP RR+ LLNTQN ING+TK
Sbjct: 301 SPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKPPETSDRRIVLLNTQNKINGYTK 360
Query: 391 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 450
WAINNVSLTLP TPYLGS+KY L +AFDQ PPEN+ +YD+ KPP N NTT G+G+Y L
Sbjct: 361 WAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRL 420
Query: 451 GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEKKFNLKNPPLK 509
NTTVDVILQNAN + N SE HPWHLHGHDFWVLG GEGKF DEK +NLKNPPL+
Sbjct: 421 KFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLR 480
Query: 510 NTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGL 569
NT VIFPYGWTALRFVADNPG WAFHCHIEPH H+GMGVV A GVE VG +P +AL CGL
Sbjct: 481 NTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGKLPKEALGCGL 540
Query: 570 T 570
T
Sbjct: 541 T 541
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 885 bits (2289), Expect = 0.0
Identities = 380/572 (66%), Positives = 453/572 (79%), Gaps = 2/572 (0%)
Query: 11 VVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGD 70
++ WI+ + +V + + R Y WEVEY +W PDCKE VM +NGQFPGPTI A AGD
Sbjct: 3 MIVWWIVTVVAVLTHTASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGD 62
Query: 71 TIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYF 130
TI V LTNKL TEG+VIHWHGIRQ G+PWADG A ++QC INPGET+ Y+F V+K GT+F
Sbjct: 63 TIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTVEKPGTHF 122
Query: 131 YHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLR 190
YHGH GMQRSAGLYGSLIVDVA G KE YDGEFNLLLSDWWH S+ QE+GLSS+P+R
Sbjct: 123 YHGHYGMQRSAGLYGSLIVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGLSSKPMR 182
Query: 191 WIGEPQTLLINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTYRLRIAS 249
WIGE Q++LINGRGQFNCSLAA FSNG C + +QCAPQ L V+PNKTYR+R+AS
Sbjct: 183 WIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLAS 242
Query: 250 TTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309
TTALASLNLAV+ HK+VVVEADGNY+ PF DD+DIYSGESYSVLLTT+QDPS NY+IS
Sbjct: 243 TTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISV 302
Query: 310 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPP 369
GVRGRKP T ALT+LNY ASK+P SPPP+TPRWDD++ SK+FS KIF+ MGSP PP
Sbjct: 303 GVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSPP 362
Query: 370 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 429
+ +RL LLNTQN I+G+TKWAINNVSL P TPYLGS+KY LK F++ PP ++ +
Sbjct: 363 KKYRKRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMD 422
Query: 430 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489
YD+M PP NTT G+G+Y+ N TVDVI+QNAN ++ +SEIHPWHLHGHDFWVLG G
Sbjct: 423 YDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYG 482
Query: 490 EGKFTKE-DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548
+GKF DEK +NLKNPPL+NTA+++PYGWTA+RFV DNPG W FHCHIEPH H+GMGV
Sbjct: 483 DGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGV 542
Query: 549 VLALGVETVGNIPNQALACGLTGKRFMNPKQN 580
V A G+ +G IP++AL CGLT + MN +N
Sbjct: 543 VFAEGLNRIGKIPDEALGCGLTKQFLMNRNRN 574
|
Length = 574 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 695 bits (1796), Expect = 0.0
Identities = 293/558 (52%), Positives = 379/558 (67%), Gaps = 5/558 (0%)
Query: 16 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVE 75
L+ + + ++ R YKWEV+Y + SPDC + +V+ ING+ PGPTI A+ GDT+ VE
Sbjct: 9 FLLFSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVE 68
Query: 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135
L N L TE V IHWHGIRQ+GTPW DGT ++QCPI PGET+ Y F VD+ GTY YH H
Sbjct: 69 LKNSLLTENVAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVVDRPGTYLYHAHY 128
Query: 136 GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 195
GMQR AGLYGS+ V + G+ EPF YD + +++L+DW+H+S +EQ +GLSS P W+GEP
Sbjct: 129 GMQREAGLYGSIRVSLPRGKSEPFSYDYDRSIILTDWYHKSTYEQALGLSSIPFDWVGEP 188
Query: 196 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALAS 255
Q+LLI G+G++NCSL + A C N +C+P +L V P KTYRLRI+S TAL++
Sbjct: 189 QSLLIQGKGRYNCSLVSS-PYLKAGVCNAT-NPECSPYVLTVVPGKTYRLRISSLTALSA 246
Query: 256 LNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 315
L+ ++ H M VVEADG+YV+PF V ++ IYSGE+YSVL+ +QDPS NYW++ V R
Sbjct: 247 LSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRN 306
Query: 316 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS-PKPPTNFHR 374
TPP L + NY+P + P + PP P W+D + + S I A G PP R
Sbjct: 307 NTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPPPLTSDR 366
Query: 375 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF-SNEYDVM 433
+ LLNTQN +NG+ +W++NNVS LP TPYL ++K L AFDQ PPE + YD+
Sbjct: 367 VIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIY 426
Query: 434 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF 493
P N+N T +Y L N+TVD+ILQNAN + N SE HPWHLHGHDFWVLG GEGKF
Sbjct: 427 AKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYGEGKF 486
Query: 494 TK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552
D KK+NL +P +KNT + PYGWTALRF ADNPG WAFHCHIE HF +GMGVV
Sbjct: 487 NMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEE 546
Query: 553 GVETVGNIPNQALACGLT 570
G+E VG +P+ + CG +
Sbjct: 547 GIERVGKLPSSIMGCGES 564
|
Length = 566 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 325 bits (834), Expect = e-104
Identities = 197/565 (34%), Positives = 289/565 (51%), Gaps = 66/565 (11%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
+ RHY ++V+ + C ++ +NG+FPGPT+ AR GDT+ V +TN + V IHW
Sbjct: 2 EVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNV-QYNVTIHW 60
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLI 148
HG+RQL WADG A I+QCPI PG++Y+Y F + + GT ++H H+ R A +YG+++
Sbjct: 61 HGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIV 119
Query: 149 VDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ---TLLINGRG 204
+ G PF D E ++L +WW+ V + ++ + G P ING
Sbjct: 120 ILPKPGVPYPFPKPDREVPIILGEWWNADVEA----VINQANQTGGAPNVSDAYTINGHP 175
Query: 205 Q--FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN 262
+NCS F L V+P KTY LRI + L A+ N
Sbjct: 176 GPLYNCSSKDTFK-------------------LTVEPGKTYLLRIINAALNDELFFAIAN 216
Query: 263 HKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT---P 319
H + VVE D Y +PF+ + I G++ +VLLT +Q P Y+++A P
Sbjct: 217 HTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPG-RYFMAARPYMDAPGAFDNT 275
Query: 320 PALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP---PTNFHRRL 376
+L Y TS S P+ P P ++D + +FSNK+ +L + P P RRL
Sbjct: 276 TTTAILQYKGTSNSAKPILP--TLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRL 333
Query: 377 TL----------LNTQNTINGFTKWA--INNVSLTLPPTPYLGSIKYGLKDAFDQN---G 421
NT NG T++A +NN+S +P T L + +G+ F +
Sbjct: 334 FFTIGLGLDPCPNNTCQGPNG-TRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPAN 392
Query: 422 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 481
PP F+ Y P N TT G+ V L N+TV+++LQ+ + + E HP HLHG+
Sbjct: 393 PPTKFN--YTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGS---ENHPIHLHGY 447
Query: 482 DFWVLGRGEGKF-TKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 540
+F+V+G G G F K+D KFNL +PP +NT + GW A+RFVADNPG W HCH+E
Sbjct: 448 NFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEV 507
Query: 541 HFHIGMGVVLALGVETVGNIPNQAL 565
H G+ + V+ G PNQ+L
Sbjct: 508 HTTWGLKMAFL--VDN-GKGPNQSL 529
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 1e-85
Identities = 164/544 (30%), Positives = 246/544 (45%), Gaps = 76/544 (13%)
Query: 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+ S+V +NG PGP IR + G T + + N + V +HWHG+ Q P++DGT S
Sbjct: 27 RYSVV--VNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLAS 84
Query: 108 QCPINPGETYLYRFKVD--KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF 165
Q PI PG + Y K + AG+YFYH H+G Q + +G LIV+ D E P+ YD E
Sbjct: 85 QWPIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQ-AVTAFGPLIVE--DCEPPPYKYDDER 141
Query: 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLR 225
LL+SD++ + E E GL S P W GE + +L+NG+ + ++
Sbjct: 142 ILLVSDFFSATDEEIEQGLLSTPFTWSGETEAVLLNGKSG-----------NKSFYAQIN 190
Query: 226 GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK-MVVVEADGNYVQPFEVDDMD 284
+ C ++ V+P KTYRLR TAL+ ++L +++H+ + ++EADG+Y +P ++D +
Sbjct: 191 PSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQ 250
Query: 285 IYSGESYSVLLTTN------QDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLS 338
+ G+ YSVL Y+I R R P +L Y ASK+P
Sbjct: 251 LGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDR-PKVYRGYAVLRYRSDKASKLPSV 309
Query: 339 PPP-------ITPRWDDYDHSKSFSNKIFALMGSPKPPT--NFHRRLTLLNTQN--TING 387
P T W +Y+ + PT RR+ + QN +NG
Sbjct: 310 PETPPLPLPNSTYDWLEYELEPLSEEN------NQDFPTLDEVTRRVVIDAHQNVDPLNG 363
Query: 388 FTKWAINNVSLT--LPPTPYLGSI-KYGLKDAFDQNGPPEN--FSNEYDVMKPPVNANTT 442
W N +S T + TPYL I + GL + N F E P
Sbjct: 364 RVAWLQNGLSWTESVRQTPYLVDIYENGLPATPNYTAALANYGFDPETRAF--PAKVGEV 421
Query: 443 LGSGVYMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEK 499
L +++ QN + + HP+H HG F+ +G G+G++ +E
Sbjct: 422 L-------------EIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEA 468
Query: 500 KFNLKNPPLKNTAVIFPY----------GWTALRFVADNPGAWAFHCHIEPHFHIGMGVV 549
K P L++T +++ Y GW A R NPG W HCHI H +GM V
Sbjct: 469 KLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTV 528
Query: 550 LALG 553
G
Sbjct: 529 WVFG 532
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 1e-66
Identities = 158/558 (28%), Positives = 255/558 (45%), Gaps = 67/558 (12%)
Query: 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI 92
+ W V Y SP V+ INGQFPGP I + + + I + + N L E ++ W GI
Sbjct: 29 FFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNL-DEPFLLTWSGI 87
Query: 93 RQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDV 151
+Q W DG + CPI PG + Y F+ D+ G+YFY+ GM R+AG +G L V+
Sbjct: 88 QQRKNSWQDGVPG-TNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNS 146
Query: 152 ADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSL 210
P+ + ++ +L+ DW+ +S + L S R +G P +LING+
Sbjct: 147 RLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLDSG--RTLGRPDGVLINGKSG----- 199
Query: 211 AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270
K G + + ++P KTYR RI + +SLN ++ HKM +VE
Sbjct: 200 ------------KGDGKD---EPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEM 244
Query: 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330
+G++V + D +D++ G+ +SVL+T NQ P +Y++ A R K ++ Y
Sbjct: 245 EGSHVLQNDYDSLDVHVGQCFSVLVTANQAPK-DYYMVASTRFLKKVL-TTTGIIRY--- 299
Query: 331 SASKIPLSP----PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH-------RRLTLL 379
K P SP P+ W + +SF + A P P ++H R + L+
Sbjct: 300 EGGKGPASPELPEAPVGWAW-SLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLV 358
Query: 380 NTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMK---PP 436
N+ + ++G ++A+N VS P TP + +G+ D F +YD +K P
Sbjct: 359 NSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKV--------F--KYDTIKDNPPA 408
Query: 437 VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 496
+ V + T V++I +N S + WHL G+ F+ + G +T E
Sbjct: 409 KITKIKIQPNVLNITFRTFVEIIFEN-----HEKS-MQSWHLDGYSFFAVAVEPGTWTPE 462
Query: 497 DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV---VL--A 551
K +NL + ++T ++P W A+ DN G W ++G + VL
Sbjct: 463 KRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPE 522
Query: 552 LGVETVGNIPNQALACGL 569
+ N+P AL CG
Sbjct: 523 RSLRDEYNMPENALLCGK 540
|
Length = 552 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 212 bits (542), Expect = 8e-62
Identities = 168/569 (29%), Positives = 257/569 (45%), Gaps = 66/569 (11%)
Query: 16 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVE 75
+ +L SV + ++Y W V Y SP V+ INGQFPGP + D I +
Sbjct: 14 LAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILN 73
Query: 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGH 134
L NKL + ++ W+GI+Q W DG + CPI P Y Y+F+ D+ GT+ Y
Sbjct: 74 LINKL-DQPFLLTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGTFTYFPS 131
Query: 135 LGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVGLSS-RPLRWI 192
++AG +G++ V PF DG+F LL+ DW+ S + L S + L +
Sbjct: 132 TLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGKVLPF- 190
Query: 193 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA 252
P +LING+ Q S S +Q KTY RI++
Sbjct: 191 --PDGVLINGQTQ---------STFSGDQ------------------GKTYMFRISNVGL 221
Query: 253 LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312
SLN ++ H M +VE +G++ D +D++ G+S +VL+T NQ P +Y+I A R
Sbjct: 222 STSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPK-DYYIVASTR 280
Query: 313 -GRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN 371
R+ T A+ + T AS + P W ++++ + A P P +
Sbjct: 281 FTRQILTATAVLHYSNSRTPASGPLPALPSGELHW-SMRQARTYRWNLTASAARPNPQGS 339
Query: 372 FH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 424
FH + + L N+ ING ++A+N VS TP LK A D G P
Sbjct: 340 FHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTP--------LKLA-DYFGIPG 390
Query: 425 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 484
FS + P + + V L+ ++V+ QN N + WHL G+DFW
Sbjct: 391 VFSVN-SIQSLPSGGPAFVATSVMQTSLHDFLEVVFQN------NEKTMQSWHLDGYDFW 443
Query: 485 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 544
V+G G G++T +NL + ++TA ++P WT + DN G W I ++
Sbjct: 444 VVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYL 503
Query: 545 GMGVVLAL--GVETVGN---IPNQALACG 568
G L + V ++ N IP+ AL CG
Sbjct: 504 GQQFYLRVWNQVHSLANEYDIPDNALLCG 532
|
Length = 539 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 212 bits (540), Expect = 2e-61
Identities = 170/586 (29%), Positives = 257/586 (43%), Gaps = 88/586 (15%)
Query: 5 LRHVAVVVTCWILMLCSVFETSYG-SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPT 63
+RHV V V ++L+ + E SY + Y+W V Y V+ IN FPGP
Sbjct: 1 MRHVFVEV--FVLISLVILELSYAFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPL 58
Query: 64 IRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV 123
+ A A D I V + N L TE ++ W+G++ W DG + CPI PG + YRF+V
Sbjct: 59 LNATANDVINVNIFNNL-TEPFLMTWNGLQLRKNSWQDGVRG-TNCPILPGTNWTYRFQV 116
Query: 124 -DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWW---HRSVH 178
D+ G+YFY L +Q++AG YG++ + + PF D E+++L+ DW+ H +
Sbjct: 117 KDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMR 176
Query: 179 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238
S P P +L NGRG E +
Sbjct: 177 ASLDNGHSLP-----NPDGILFNGRGP---------------------EET----FFAFE 206
Query: 239 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN 298
P KTYRLRI++ LN +++H M++VE +G YVQ +DI+ G+SYSVL+T
Sbjct: 207 PGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAK 266
Query: 299 QDPS---YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS--- 352
DP +Y+I A R A + L+ Y P S P+ P P+ P DY S
Sbjct: 267 TDPVGIYRSYYIVATAR-FTDAYLGGVALIRY-PNS-PLDPVGPLPLAPALHDYFSSVEQ 323
Query: 353 -KSFSNKIFALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTP 404
S + P ++H R + L N +G ++ IN VS P TP
Sbjct: 324 ALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTP 383
Query: 405 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKP------PVNANTTLGSGVYMLGLNTTVDV 458
L D F N D + P P N TLG+ V + +
Sbjct: 384 ------LKLVDHFQLN----------DTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHI 427
Query: 459 ILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG 518
+ QN L + +H+ G++F+V+G G G +++ + +NL + ++T ++PY
Sbjct: 428 VFQNP------LFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYS 481
Query: 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGV---VLALGVETVGNIP 561
WTA+ DN G W +++G + V G E IP
Sbjct: 482 WTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIP 527
|
Length = 545 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 9e-60
Identities = 159/591 (26%), Positives = 267/591 (45%), Gaps = 74/591 (12%)
Query: 10 VVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSP--DCKESIVMGINGQFPGPTIRAR 67
+++ L L + G +Y WEV Y+ +P K+ +GINGQFPGP +
Sbjct: 7 LLLLAAALALAPAPAGA-GDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVT 65
Query: 68 AGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKA 126
+ V + N L E +++ WHG++Q + W DG + C I G + Y+F+V D+
Sbjct: 66 TNWNLVVNVRNAL-DEPLLLTWHGVQQRKSAWQDGVGG-TNCAIPAGWNWTYQFQVKDQV 123
Query: 127 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--DGEFNLLLSDWWHRSVHEQEVGL 184
G++FY + R+AG YG++ ++ D PF + G+ L ++DW+ R L
Sbjct: 124 GSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRAL 183
Query: 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAP-----QILHVQP 239
+ L +G P +LIN G + + N+ P + ++V P
Sbjct: 184 DAGDL--LGAPDGVLINAFGPY------------------QYNDSLVPPGITYERINVDP 223
Query: 240 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ 299
KTYR R+ + SLN ++ H +++VEA+G+Y ++DI+ G+SYS LLT +Q
Sbjct: 224 GKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQ 283
Query: 300 DPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYD------HSK 353
+ S +Y++ A R A LT + S S+ P S P D YD ++
Sbjct: 284 NASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQAR 343
Query: 354 SFSNKIFALMGSPKPPTNFH------RRLTLLNTQ--NTINGFTKWAINNVSLTLPPTPY 405
S + A P P +FH + LL + I+G + +N +S P TP
Sbjct: 344 SIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPL 403
Query: 406 LGSIKYGLKDAFDQNGP--PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNA 463
+ + + + F + P P N + D T++ +G Y +++I QN
Sbjct: 404 MLAQIFNVPGVFKLDFPNHPMNRLPKLD---------TSIINGTY----KGFMEIIFQN- 449
Query: 464 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR 523
N + + +HL G+ F+V+G G +T +N + ++T +FP WTA+
Sbjct: 450 -----NATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAIL 504
Query: 524 FVADNPGAWAFHCHIEPHFHIGMGVVLAL------GVETVGNIPNQALACG 568
DN G W +++G V + + +TV IP+ A+ CG
Sbjct: 505 VFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCG 555
|
Length = 596 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 5e-57
Identities = 127/506 (25%), Positives = 175/506 (34%), Gaps = 106/506 (20%)
Query: 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+ V G NG PGPTIR + GDT+ ++LTN+L +HWHG+ G DG ++
Sbjct: 50 TGATVWGYNGALPGPTIRVKKGDTVTLDLTNRL-LVDTSVHWHGLPVPGE--MDGVPPLT 106
Query: 108 QCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNL 167
Q P PGET Y F D GTY+YH H Q GL G+LI++ D EP D E +
Sbjct: 107 QIPPGPGETPTYTFTQDVPGTYWYHPHTHGQVYDGLAGALIIE--DENSEPLGVDDEPVI 164
Query: 168 LLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGN 227
L DW + P TLL+NG
Sbjct: 165 LQDDW---LDEDGTDLYQEGPAMGGFPGDTLLVNGA------------------------ 197
Query: 228 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYS 287
V RLR+ + + +LA+ + V+ DG + P VD++ +
Sbjct: 198 ---ILPFKAVPGG-VVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAP 253
Query: 288 GESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWD 347
GE Y VL+ N + + S L+ P D
Sbjct: 254 GERYEVLVDMNDGGAVTLTALGEDMPDTLKG----FRAPNPILTPSYPVLNGRVGAPTGD 309
Query: 348 DYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 407
DH+ + P T+FH I G+ WAIN +
Sbjct: 310 MADHAPVGLLVTILVEPGPNRDTDFH-------LIGGIGGYV-WAINGKA---------- 351
Query: 408 SIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 467
+D + + A T +L N
Sbjct: 352 ----------------------FDDNRVTLIAK-----------AGTRERWVLTN----- 373
Query: 468 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527
+ HP+HLHGH F VL P K+T ++ P +RF AD
Sbjct: 374 -DTPMPHPFHLHGHFFQVLSGD---------APAPGAAPGWKDTVLVAPGERLLVRFDAD 423
Query: 528 NPGAWAFHCHIEPHFHIGMGVVLALG 553
PG W FHCHI H GM +
Sbjct: 424 YPGPWMFHCHILEHEDNGMMGQFGVV 449
|
Length = 451 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 4e-55
Identities = 159/593 (26%), Positives = 252/593 (42%), Gaps = 81/593 (13%)
Query: 9 AVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARA 68
A+++ L+ E Y R ++W V Y SP + ING+FPGP I +
Sbjct: 10 AMILGLLFLISFVAAEDPY----RFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVT 65
Query: 69 GDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAG 127
D + + + N L E +I W GIR + DG + CPI PG+ Y Y +V D+ G
Sbjct: 66 NDNLIINVFNHL-DEPFLISWSGIRNWRNSYQDGVYG-TTCPIPPGKNYTYALQVKDQIG 123
Query: 128 TYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWW---HRSVHEQEVG 183
+++Y LG ++AG +G++ + PF ++ +L+ DW+ H+ + Q
Sbjct: 124 SFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDN 183
Query: 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 243
PL P +LINGRG + L+++P KTY
Sbjct: 184 GGKLPL-----PDGILINGRG--------------------------SGATLNIEPGKTY 212
Query: 244 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 303
RLRI++ SLN ++NH M +VE +G + +D++ G+SYSVL+T +Q P+
Sbjct: 213 RLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQ-PAK 271
Query: 304 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPP----PITPRWDDYDHSKSFSNKI 359
+Y+I R T L S S P+S P PI W +D +++ +
Sbjct: 272 DYYIVVSSR----FTSKILITTGVLHYSNSAGPVSGPIPDGPIQLSW-SFDQARAIKTNL 326
Query: 360 FALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 412
A P P ++H R + L N+ I G ++A+N+ S TP
Sbjct: 327 TASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTP------LK 380
Query: 413 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 472
L D F G N + P N + V V+++ +N I
Sbjct: 381 LADYFKIAG----VYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI------ 430
Query: 473 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 532
+ WHL G+ F+V+G GK++ K +NL + + T ++P WTA+ DN G W
Sbjct: 431 VQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMW 490
Query: 533 AFHCHIEPHFHIGMGVVLALGVETVG-----NIPNQALACG-LTGKRFMNPKQ 579
+ ++G + + + IP AL CG TG P
Sbjct: 491 NLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHTTTPGP 543
|
Length = 543 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 186 bits (473), Expect = 4e-52
Identities = 152/576 (26%), Positives = 248/576 (43%), Gaps = 61/576 (10%)
Query: 16 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVE 75
++M ++ T Y W V Y S + INGQFPGP IR+ D + +
Sbjct: 1 MMMTTTIISFVKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVIN 60
Query: 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGH 134
+ N L E ++ W+G+ + DG + CPI PG+ Y Y F+V D+ G+YFY
Sbjct: 61 VHNDL-DEPFLLSWNGVHMRKNSYQDGVYG-TTCPIPPGKNYTYDFQVKDQVGSYFYFPS 118
Query: 135 LGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIG 193
L +Q++AG YGSL + PF G+F L+ DW+ R+ H + +
Sbjct: 119 LAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRN-HTTLKKILDGGRKLPL 177
Query: 194 EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL 253
P ++ING+G ++ +S + V KTYR RI++
Sbjct: 178 MPDGVMINGQG-----VSYVYS-------------------ITVDKGKTYRFRISNVGLQ 213
Query: 254 ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313
SLN + H++ ++E +G + +DI+ G++YSVL+T +Q P NY I R
Sbjct: 214 TSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQ-PPQNYSIVVSTRF 272
Query: 314 RKPATPPALTLLNYHPTSASKIPLS--PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTN 371
+ TL +Y + KI + P P W ++S + A P +
Sbjct: 273 IAAKVLVSSTL-HYSNSKGHKIIHARQPDPDDLEWS-IKQAQSIRTNLTASGPRTNPQGS 330
Query: 372 FH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 424
+H R L L ++ + ++AIN VS TP + + +K F P+
Sbjct: 331 YHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPD 390
Query: 425 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 484
KP L + V N +++I QN I + +HL G++FW
Sbjct: 391 ---------KPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKI------VQSYHLDGYNFW 435
Query: 485 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 544
V+G +G +++ +++NLK+ ++T ++P WTA+ DN G W ++
Sbjct: 436 VVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYL 495
Query: 545 GMGVVLALGVETVG-----NIPNQALACGLTGKRFM 575
G L + T +P AL CG + M
Sbjct: 496 GQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNKNM 531
|
Length = 536 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 2e-47
Identities = 62/116 (53%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Query: 37 EVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLG 96
V Y +P V+G+NGQFPGPTIR R GDT+ V +TN L E IHWHG+RQ G
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNL-DEPTTIHWHGLRQPG 59
Query: 97 TPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRS-AGLYGSLIVD 150
TPWADG ++QCPI PGE++ YRF V +AGTY+YH H + AGLYG++I++
Sbjct: 60 TPWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIE 115
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 8e-46
Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 163 GEFNLLLSDWWHRSVHEQEVG---LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 219
++ + LSDW+H+ + E P + P +LING+
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDG-------------- 46
Query: 220 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFE 279
+ L V P KTYRLRI + SLN +++ HKM VVE DG YV PF
Sbjct: 47 ----------ASLATLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFT 96
Query: 280 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 329
VD +DI+ G+ YSVL+T NQDP NYWI A A +L Y
Sbjct: 97 VDSLDIFPGQRYSVLVTANQDPG-NYWIVASPNIPAFDNGTAAAILRYSG 145
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 1e-35
Identities = 92/268 (34%), Positives = 131/268 (48%), Gaps = 25/268 (9%)
Query: 55 INGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPG 114
+NG PGP +R R GDT+ + +TN L E IHWHGI L DG +S I PG
Sbjct: 69 VNGSIPGPLLRWREGDTVRLRVTNTLP-EDTSIHWHGI--LLPFQMDGVPGVSFAGIAPG 125
Query: 115 ETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWW- 173
ET+ YRF V ++GTY+YH H G Q AGLYG LI+D A E +P D E +LLSDW
Sbjct: 126 ETFTYRFPVRQSGTYWYHSHSGFQEQAGLYGPLIIDPA--EPDPVRADREHVVLLSDWTD 183
Query: 174 ---------------HRSVHEQEVGLSSRPLRWIGEPQTL---LINGRGQFNCSLAAHFS 215
H + +++ V R +R G QTL + G+ + + A
Sbjct: 184 LDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADV- 242
Query: 216 NGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 275
NGS + G +P + RLR + +A+ ++ + K+ VV DG YV
Sbjct: 243 NGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYV 302
Query: 276 QPFEVDDMDIYSGESYSVLLTTNQDPSY 303
P VD+ I E++ V++ D ++
Sbjct: 303 HPVSVDEFRIAPAETFDVIVEPTGDDAF 330
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 1e-33
Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 425 NFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 483
+ D + LG+ V L V+++LQN N HP+HLHGH F
Sbjct: 11 QITGGNDRANWSPDNGPPLGTTEVITLPNGDRVEIVLQN------NTMGPHPFHLHGHSF 64
Query: 484 WVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 543
VLGRG G +T +NL +P ++T + P GW A+RF ADNPG W FHCHI H
Sbjct: 65 QVLGRGGGPWT--PTATYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCHILWHLD 122
Query: 544 IGMGVVLA 551
GM
Sbjct: 123 QGMMGQFV 130
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|131429 TIGR02376, Cu_nitrite_red, nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 1e-14
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 53 MGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH---WHGIRQLGTPWADGTASISQC 109
M +G PGP IR GD + + L N + H +H G A+++Q
Sbjct: 50 MTFDGSVPGPLIRVHEGDYVELTLINP--PTNTMPHNVDFHAATGAL-----GGAALTQ- 101
Query: 110 PINPGETYLYRFKVDKAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF 165
+NPGET RFK + G + YH G + +G+ G+++V +G E YD E+
Sbjct: 102 -VNPGETATLRFKATRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLPE---YDKEY 157
Query: 166 NLLLSDWW 173
+ SD +
Sbjct: 158 YIGESDLY 165
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification [Central intermediary metabolism, Nitrogen metabolism]. Length = 311 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 72/255 (28%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 54 GINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINP 113
G NG GP +R + G + V++TN+L E +HWHG+ G DG Q I P
Sbjct: 69 GYNGNLLGPAVRLQRGKAVTVDITNQL-PEETTLHWHGLEVPGE--VDGG---PQGIIAP 122
Query: 114 GETYLYRFKVDK-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLL 168
G F VD+ A T ++H H G Q + GL G ++++ + K L
Sbjct: 123 GGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLG---------L 173
Query: 169 LSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSL----AAHFSNGSAEQCKL 224
W G+ P+ Q + GQ + L AA G L
Sbjct: 174 PKQW----------GVDDIPVIL----QDKRFSADGQIDYQLDVMTAAVGWFGD----TL 215
Query: 225 RGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVK-NHKMVVVEADGNYV-QPFEVDD 282
N PQ H P RLR+ + SLNLA + V+ +DG + +P +V +
Sbjct: 216 LTNGAIYPQ--HAAPRGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVKVSE 273
Query: 283 MDIYSGESYSVLLTT 297
+ I GE + VL+ T
Sbjct: 274 LPILMGERFEVLVDT 288
|
Length = 523 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 474 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 533
HP HLHG + L G+G+F K+T + P G + R AD G WA
Sbjct: 521 HPIHLHGM-WSELEDGQGEFQ------------VRKHTVDVPPGGKRSFRVTADALGRWA 567
Query: 534 FHCHIEPHFHIGM 546
+HCH+ H GM
Sbjct: 568 YHCHMLLHMEAGM 580
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.001
Identities = 29/115 (25%), Positives = 39/115 (33%), Gaps = 15/115 (13%)
Query: 53 MGINGQFPGPT--IRARAGDTIAVELTNKLYTEGVVIHWHG-----IRQLGTPWADGTAS 105
NG G T I GD + + L N H HG + + G PW
Sbjct: 22 SPDNGPPLGTTEVITLPNGDRVEIVLQN-NTMGPHPFHLHGHSFQVLGRGGGPWTPTATY 80
Query: 106 ISQCP-------INPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153
P + PG RFK D G + +H H+ G+ G +VD
Sbjct: 81 NLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCHILWHLDQGMMGQFVVDPGS 135
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|182808 PRK10883, PRK10883, FtsI repressor; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
V GING++ GPTIR GD + + +N+L TE V + G+ Q+ P G A + +
Sbjct: 67 VWGINGRYLGPTIRVWKGDDVKLIYSNRL-TEPVSMTVSGL-QVPGPLMGGPARM----M 120
Query: 112 NPGETYLYRFKV-DKAGTYFYHG----HLGMQRSAGLYGSLIVDVADGEKEPF--HYD-G 163
+P + + A T +YH + GL G +V+ + P HY
Sbjct: 121 SPNADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVD 180
Query: 164 EFNLLLSD 171
+F +++ D
Sbjct: 181 DFPVIIQD 188
|
Length = 471 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.94 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.76 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.76 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.72 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.4 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.37 | |
| PLN02835 | 539 | oxidoreductase | 99.28 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.28 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 99.27 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 99.05 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 99.04 | |
| PLN02991 | 543 | oxidoreductase | 99.03 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 99.03 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 99.02 | |
| PLN02792 | 536 | oxidoreductase | 98.99 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.98 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.94 | |
| PLN02604 | 566 | oxidoreductase | 98.91 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.89 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.76 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.68 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.54 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.43 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.39 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.28 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 98.18 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.08 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 97.95 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.9 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.89 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.63 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.6 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.46 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.22 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 97.2 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.19 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.55 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.41 | |
| PRK02710 | 119 | plastocyanin; Provisional | 95.93 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 95.74 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.59 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 95.21 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 93.5 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.43 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 92.13 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 91.8 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 91.7 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 90.84 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 90.7 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 90.69 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 90.46 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 90.26 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 89.2 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 88.58 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 85.71 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 83.77 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 83.7 | |
| COG4263 | 637 | NosZ Nitrous oxide reductase [Energy production an | 81.17 |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-104 Score=861.12 Aligned_cols=551 Identities=67% Similarity=1.216 Sum_probs=425.8
Q ss_pred cccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 25 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
..+.+++++|+|+|++..+++||+++++++|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|
T Consensus 17 ~~~~~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~ 96 (574)
T PLN02191 17 HTASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAA 96 (574)
T ss_pred HhhccceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCC
Confidence 34457899999999999999999999999999999999999999999999999996558999999999999999999999
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhh
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
+++||+|+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.+...+..||+|++|+++||++..........
T Consensus 97 gvtq~pI~PG~s~~Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~ 176 (574)
T PLN02191 97 GVTQCAINPGETFTYKFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGL 176 (574)
T ss_pred ccccCCcCCCCeEEEEEECCCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCCCCCeeEEEeeeccccCChHHHHHhh
Confidence 99999999999999999999999999999999999999999999997665455677899999999999998754433333
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCC-CcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
...+..+..+++.+||||++...|........+ ....|.+..++.+.+.++++++||+|||||||+|+...+.|+|+||
T Consensus 177 ~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH 256 (574)
T PLN02191 177 SSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGH 256 (574)
T ss_pred ccCCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCC
Confidence 332323345789999999999888542211111 1123555555556666899999999999999999999999999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
+|+|||+||.+++|+.+++|.|++||||||+|++++.++++||||+.....+.......|||+|.+......+....+..
T Consensus 257 ~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~ 336 (574)
T PLN02191 257 KLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVT 336 (574)
T ss_pred eEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCCceEEEEECCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999844568999997655443333457999998654332222222333
Q ss_pred CCCCCCCccccccccccccCCCCCCC-CCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCC
Q 008038 344 PRWDDYDHSKSFSNKIFALMGSPKPP-TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 422 (580)
Q Consensus 344 p~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~ 422 (580)
|.+.+......+...+......+.+| ...++.+.+... ....+...|.+|+.+|..|..|.|.+...+..+.|+...+
T Consensus 337 p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~ 415 (574)
T PLN02191 337 PRWDDFERSKNFSKKIFSAMGSPSPPKKYRKRLILLNTQ-NLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSP 415 (574)
T ss_pred CcccccchhhcccccccccccCCCCCCcccceEEEeccc-ceeCCeEEEEECcccCcCCCcchHHHHhhccCcccccCCC
Confidence 44443322221211111111111122 223455544322 1123456899999999999999988887666666655544
Q ss_pred CCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-cccccc
Q 008038 423 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-EDEKKF 501 (580)
Q Consensus 423 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-~~~~~~ 501 (580)
+..+..+++..+.......+.++.++.++.|++|||+|+|....++.....||||||||+|+||++|.|.|++ .+...+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~ 495 (574)
T PLN02191 416 PRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTY 495 (574)
T ss_pred cccccccccccCCCccccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEecCCCCCcccCcccc
Confidence 4333223322211111123456778999999999999999752111123389999999999999999999986 233578
Q ss_pred CCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCCCccccccCCCCcCCCC
Q 008038 502 NLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMN 576 (580)
Q Consensus 502 ~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~ 576 (580)
|+.||++|||+.||++||++|||++||||.|+|||||+||+..||+++|.+++++++++|+.++.|+.++..-++
T Consensus 496 nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~e~~~~~~~~p~~~~~C~~~~~~~~~ 570 (574)
T PLN02191 496 NLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKIPDEALGCGLTKQFLMN 570 (574)
T ss_pred cCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEecChhhccCCCcchhhhhcccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988774443
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-104 Score=861.21 Aligned_cols=538 Identities=77% Similarity=1.351 Sum_probs=430.1
Q ss_pred eEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcccc
Q 008038 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCP 110 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~ 110 (580)
+|+|+|+|++..++|||+++.+|+|||++|||+|++++||+|+|+|+|+|..++++|||||+++.+++|+||+++++||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 48999999999999999999999999999999999999999999999996568999999999999999999999999999
Q ss_pred CCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCCCCC
Q 008038 111 INPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLR 190 (580)
Q Consensus 111 i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~ 190 (580)
|+||++++|+|++.++||||||||.+.|+.+||+|+|||+++.++..|+.||+|++|+++||+++...+........+..
T Consensus 81 I~PG~s~~y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~ 160 (541)
T TIGR03388 81 INPGETFIYNFVVDRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPFHYDGEFNLLLSDWWHKSIHEQEVGLSSKPMR 160 (541)
T ss_pred cCCCCEEEEEEEcCCCEEEEEEecchHHhhccceEEEEEecCCCCCCCccccceEEEEeecccCCCHHHHHhhcccCCCc
Confidence 99999999999999999999999999999999999999999876667888999999999999999876555444433333
Q ss_pred CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEE
Q 008038 191 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270 (580)
Q Consensus 191 ~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~ 270 (580)
+..+++.++|||++..+|.............|....++...+..++|++|++|||||||+|..+.+.|+|+||+|+|||+
T Consensus 161 ~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VIa~ 240 (541)
T TIGR03388 161 WIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEA 240 (541)
T ss_pred CCCCCcceEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEEEe
Confidence 33578999999999888865322111122345444455556667999999999999999999999999999999999999
Q ss_pred CCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 008038 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYD 350 (580)
Q Consensus 271 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~ 350 (580)
||.+++|+.++.+.|++||||||+|++++.++++|||++.....+.+....+|||+|.++.....++...+..|.+.+..
T Consensus 241 DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~ 320 (541)
T TIGR03388 241 DGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFD 320 (541)
T ss_pred CCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCCccccc
Confidence 99999999999999999999999999987555789999987655444556789999986543322222233345454433
Q ss_pred ccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCc
Q 008038 351 HSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEY 430 (580)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~ 430 (580)
....+............++...++++.+.......++...|++|+.+|..|..|.|.+...++...|+...++..+..++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 400 (541)
T TIGR03388 321 RSKAFSLAIKAAMGSPKPPETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDY 400 (541)
T ss_pred hhhccchhhhccccCCCCCCCCCcEEEEeccCcccCceEEEEECcccCCCCCccHHHHHhhcCCccccCCCCcccccccc
Confidence 22222212211111123344557776654443323455689999999999999999888766666665554554444444
Q ss_pred ccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-ccccccCCCCCCcc
Q 008038 431 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-EDEKKFNLKNPPLK 509 (580)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-~~~~~~~~~~p~~r 509 (580)
+....+.+...+.++.++.++.|++|+++|+|.+.+.......||||||||+||||+++.|.|+. .+...+|+.||++|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~R 480 (541)
T TIGR03388 401 DIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLR 480 (541)
T ss_pred cccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEe
Confidence 43333333345667889999999999999999753211123479999999999999999898875 23457899999999
Q ss_pred ceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCCCccccccC
Q 008038 510 NTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568 (580)
Q Consensus 510 DTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~ 568 (580)
||+.|+++||++|||++||||.|+|||||+||+..||+++|.+++++++.+|+.+++||
T Consensus 481 DTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~~~~~~~~P~~~~~C~ 539 (541)
T TIGR03388 481 NTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGKLPKEALGCG 539 (541)
T ss_pred ceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEeccccccCCCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999998
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-103 Score=850.68 Aligned_cols=558 Identities=53% Similarity=0.989 Sum_probs=432.3
Q ss_pred HHHHHHHHHHhhccccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeecc
Q 008038 12 VTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHG 91 (580)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG 91 (580)
++.++++++.+....+.+++++|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|++..++++|||||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG 84 (566)
T PLN02604 5 LALFFLLFSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHG 84 (566)
T ss_pred hhHHHHHHHHHHhhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCC
Confidence 33444555566666678899999999999999999999999999999999999999999999999999657899999999
Q ss_pred ccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEee
Q 008038 92 IRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSD 171 (580)
Q Consensus 92 ~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d 171 (580)
+++.+++|+||+++++||+|+||++++|+|++.++||||||||...|+.+||+|+|||+++.++..|+.+|+|.+|+|+|
T Consensus 85 ~~~~~~~~~DG~~~~tq~~i~pg~s~~y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~d~~l~l~D 164 (566)
T PLN02604 85 IRQIGTPWFDGTEGVTQCPILPGETFTYEFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSYDYDRSIILTD 164 (566)
T ss_pred CCCCCCccccCCCccccCccCCCCeEEEEEEcCCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCccccCcceEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999987666788899999999999
Q ss_pred cccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecC
Q 008038 172 WWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTT 251 (580)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag 251 (580)
|++.+..+........+..+..+++..+|||++..+|+.... .......|. ..++.+.++.+++++|++|||||||+|
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~G~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~v~~g~~~RlRlINa~ 242 (566)
T PLN02604 165 WYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSS-PYLKAGVCN-ATNPECSPYVLTVVPGKTYRLRISSLT 242 (566)
T ss_pred cccCCHHHHHHhhccCCCccCCCCCceEEcCCCCCCCccccC-ccccccccc-cCCCCCCceEEEecCCCEEEEEEEecc
Confidence 999987665554443332223478999999999988863100 000001233 223344566899999999999999999
Q ss_pred CceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCC
Q 008038 252 ALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 331 (580)
Q Consensus 252 ~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~ 331 (580)
....+.|+|+||+|+|||+||.+++|++++.|.|++||||||+|++++.++++|||++.....+.+...+.|||+|++..
T Consensus 243 ~~~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~aIL~Y~~~~ 322 (566)
T PLN02604 243 ALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGLAIFNYYPNH 322 (566)
T ss_pred ccceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCcceeEEEEECCCC
Confidence 99999999999999999999999999999999999999999999998844468999987655554557779999998543
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccCC-CCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhh
Q 008038 332 ASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG-SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 410 (580)
Q Consensus 332 ~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~ 410 (580)
....++...+..+.+++..........+..... ...++...++++.+....+..++...|+||+.+|..|..|.|.+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~w~in~~~~~~p~~p~L~~~~ 402 (566)
T PLN02604 323 PRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALK 402 (566)
T ss_pred CCCCCCCCCCCCCcccccchhhcchhcccccccCcCCCCCCCCeEEEEeccccccCCeEEEEECcccCCCCCCchhHhhh
Confidence 221122222222333332211111111111111 1122334567766544433334567999999999999999888877
Q ss_pred ccCCccCCCCCCCCCCC-CCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeec
Q 008038 411 YGLKDAFDQNGPPENFS-NEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489 (580)
Q Consensus 411 ~~~~~~f~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~ 489 (580)
....+.|+.+.++..+. .+++......+...+.+..++.++.|++||++|+|.+.+.......||||||||+|+||+++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGH~F~Vlg~G 482 (566)
T PLN02604 403 ENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYG 482 (566)
T ss_pred hcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCCCCCCCCEEecCCceEEEEec
Confidence 65566665443332221 11111111111123446778999999999999999753311123479999999999999999
Q ss_pred CCCCCc-ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCCCccccccC
Q 008038 490 EGKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568 (580)
Q Consensus 490 ~g~~~~-~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~ 568 (580)
.|.|++ .+...+|+.||++|||+.|+++||++|||++||||.|+|||||+||+..||+++|.+++++++.+|+.+++|+
T Consensus 483 ~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~~~~~~~~p~~~~~C~ 562 (566)
T PLN02604 483 EGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEGIERVGKLPSSIMGCG 562 (566)
T ss_pred CCCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEEEEeeChhhccCCCCCcCccc
Confidence 999876 3345789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 008038 569 LTG 571 (580)
Q Consensus 569 ~~~ 571 (580)
..+
T Consensus 563 ~~~ 565 (566)
T PLN02604 563 ESK 565 (566)
T ss_pred cCC
Confidence 655
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-101 Score=831.98 Aligned_cols=518 Identities=29% Similarity=0.505 Sum_probs=405.8
Q ss_pred cccchhHHHHHHHHHHHHhhccccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCC
Q 008038 4 GLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE 83 (580)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~ 83 (580)
|..-.++.++..+..++++....+.+.+++|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+ +++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~-L~~ 80 (539)
T PLN02835 2 GSAVNLHLLLGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINK-LDQ 80 (539)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeC-CCC
Confidence 4444555666666666666666677899999999999999999999999999999999999999999999999999 789
Q ss_pred ceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCC-CC
Q 008038 84 GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HY 161 (580)
Q Consensus 84 ~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~-~~ 161 (580)
+++|||||+++.+++|+||+++ +||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++++.+.|+ .+
T Consensus 81 ~ttiHWHGl~~~~~~~~DGv~~-tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~ 159 (539)
T PLN02835 81 PFLLTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLP 159 (539)
T ss_pred CCcEEeCCcccCCCCCCCCCcc-CcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCC
Confidence 9999999999999999999999 99999999999999997 799999999999999999999999998765544454 35
Q ss_pred CcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCC
Q 008038 162 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 241 (580)
Q Consensus 162 d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge 241 (580)
|+|++|+++||++.+...+...+.. +.. ...++.+||||+..+ .+++++||
T Consensus 160 d~e~~l~l~Dw~~~~~~~~~~~~~~-g~~-~~~~d~~liNG~~~~---------------------------~~~v~~G~ 210 (539)
T PLN02835 160 DGDFTLLVGDWYKTSHKTLQQRLDS-GKV-LPFPDGVLINGQTQS---------------------------TFSGDQGK 210 (539)
T ss_pred CceEEEEeeccccCCHHHHHHHhhc-CCC-CCCCceEEEccccCc---------------------------eEEECCCC
Confidence 8999999999999986654433332 222 457899999999865 68999999
Q ss_pred EEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCc
Q 008038 242 TYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 242 ~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
+|||||||+|....+.|+|+||+|+|||+||.+++|+.++++.|++||||||+|++++ ++|+|||++.....+ .....
T Consensus 211 ~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~-~~g~y~i~a~~~~~~-~~~~~ 288 (539)
T PLN02835 211 TYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQ-SPKDYYIVASTRFTR-QILTA 288 (539)
T ss_pred EEEEEEEEcCCCccEEEEECCCEEEEEEECCccCCCceeeEEEECcCceEEEEEEcCC-CCCcEEEEEEccccC-CCcce
Confidence 9999999999999999999999999999999999999999999999999999999997 568999998643222 33567
Q ss_pred eEEEEecCCCCCCCCCCCCCCCCCCC---CCCccccccccccccCCCCCC-------CCCcceEEEEEeeeeecCCeEEE
Q 008038 322 LTLLNYHPTSASKIPLSPPPITPRWD---DYDHSKSFSNKIFALMGSPKP-------PTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 322 ~ail~y~~~~~~~~~~~~~p~~p~~~---~~~~~~~~~~~~~~~~~~~~~-------p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
.|+|+|+++..... .+.|..|.+. +..........+......+.+ ....++++.+.......++...|
T Consensus 289 ~ail~Y~~~~~~~~--~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w 366 (539)
T PLN02835 289 TAVLHYSNSRTPAS--GPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRY 366 (539)
T ss_pred EEEEEECCCCCCCC--CCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEE
Confidence 89999986432111 1112222110 111001110001110000000 01124444443222222456799
Q ss_pred EEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCC
Q 008038 392 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 471 (580)
Q Consensus 392 ~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~ 471 (580)
++||++|..|..|.|.+.+.+..+.|+....+ ..+.+.....++.++.++.|++|+|+|+|.+..
T Consensus 367 ~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~----- 431 (539)
T PLN02835 367 AVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQ----------SLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKT----- 431 (539)
T ss_pred EECCcccCCCCCChhhhhhhcCCCccccCccc----------cCCCCCccccCCeEEEcCCCCEEEEEEECCCCC-----
Confidence 99999999999998877665554444322100 001111234467889999999999999998766
Q ss_pred CCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEE-
Q 008038 472 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL- 550 (580)
Q Consensus 472 ~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~- 550 (580)
.||||||||+|+||+++.|.|++.....+|+.||++|||+.|+++||++|||+|||||.|+|||||++|+..||+++|
T Consensus 432 -~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~ 510 (539)
T PLN02835 432 -MQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLR 510 (539)
T ss_pred -CCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEE
Confidence 899999999999999999989764445678999999999999999999999999999999999999999999999999
Q ss_pred ----ecccccccCCCccccccCCCCc
Q 008038 551 ----ALGVETVGNIPNQALACGLTGK 572 (580)
Q Consensus 551 ----~~~~~~~~~~p~~~~~c~~~~~ 572 (580)
.++.++++.+|+.++.||..++
T Consensus 511 V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 511 VWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred EccCCCccccccCCCccccccccCcc
Confidence 4455788999999999997665
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-100 Score=820.18 Aligned_cols=496 Identities=27% Similarity=0.519 Sum_probs=395.1
Q ss_pred ccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
.+.+++++|+|+|++..+++||+++++++|||++|||+|++++||+|+|+|+|+ ++++++|||||+++.+++|+||+++
T Consensus 23 ~~~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~-L~~~ttiHWHGi~q~~~~~~DGv~~ 101 (543)
T PLN02991 23 AAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNH-LDEPFLISWSGIRNWRNSYQDGVYG 101 (543)
T ss_pred hccCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCC-CCCCccEEECCcccCCCccccCCCC
Confidence 356789999999999999999999999999999999999999999999999999 6899999999999999999999998
Q ss_pred CccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHHHhh
Q 008038 106 ISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~~~~ 183 (580)
+||||+||++|+|+|++ +++||||||+|.+.|+.+||+|+|||+++++++.|+ .+|+|++|+|+||++.+...+...
T Consensus 102 -tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~ 180 (543)
T PLN02991 102 -TTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQ 180 (543)
T ss_pred -CCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecceecCCHHHHHHH
Confidence 89999999999999999 699999999999999999999999999987655665 468899999999999886554433
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
+.. +.. ...++.+||||++.+ +.++|++||+|||||||+|....+.|+|+||
T Consensus 181 ~~~-~~~-~~~~d~~liNG~~~~--------------------------~~~~v~~G~~yRlRiINa~~~~~~~~~idgH 232 (543)
T PLN02991 181 LDN-GGK-LPLPDGILINGRGSG--------------------------ATLNIEPGKTYRLRISNVGLQNSLNFRIQNH 232 (543)
T ss_pred hhc-CCC-CCCCCEEEEccCCCC--------------------------ceEEECCCCEEEEEEEeccCCeeEEEEECCC
Confidence 322 222 457899999999754 2699999999999999999999999999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
+|+|||+||.+++|..++++.|++||||||+|++++ ++|+|||++...... ......|||+|+++......+ .|..
T Consensus 233 ~~tVIa~DG~~~~p~~~~~l~i~~GQRydvlv~a~~-~~~~y~i~~~~~~~~-~~~~~~AIl~Y~g~~~~~~~~--~p~~ 308 (543)
T PLN02991 233 TMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQ-PAKDYYIVVSSRFTS-KILITTGVLHYSNSAGPVSGP--IPDG 308 (543)
T ss_pred EEEEEEeCCccccceeeeEEEEcCCcEEEEEEECCC-CCCcEEEEEeeccCC-CCcceEEEEEeCCCCCCCCCC--CCCC
Confidence 999999999999999999999999999999999998 678999998764332 345678999999754321111 1222
Q ss_pred CCCCCCC--ccccccccccccCCCCCCCC--------CcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccC
Q 008038 344 PRWDDYD--HSKSFSNKIFALMGSPKPPT--------NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 413 (580)
Q Consensus 344 p~~~~~~--~~~~~~~~~~~~~~~~~~p~--------~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~ 413 (580)
|.-.... ........+..... ...|. ..++.+.+.......++...|+||+.+|..|..|.|.+.+..+
T Consensus 309 p~~~~~~~~~~~~~~~~l~p~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~ 387 (543)
T PLN02991 309 PIQLSWSFDQARAIKTNLTASGP-RPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKI 387 (543)
T ss_pred CccccccccchhhhhhcccCCCC-CCCCCccccccccccceeEEEeecccccCceEEEEECCCccCCCCCChhhhhhhcc
Confidence 1100000 00011111111111 11111 1223333332211123567899999999999999998877766
Q ss_pred CccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCC
Q 008038 414 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF 493 (580)
Q Consensus 414 ~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~ 493 (580)
.+.|..+.-+. .+.+......+.++.++.|++|||+|+|.... .||||||||+|+||++|.|.|
T Consensus 388 ~g~~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg~G~G~f 451 (543)
T PLN02991 388 AGVYNPGSIPD----------QPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI------VQTWHLDGYSFYVVGMELGKW 451 (543)
T ss_pred cCccccccccc----------cCCCCccccCCcEEEcCCCCEEEEEEeCCCCC------CCCeeeCCcceEEEEeCCCCC
Confidence 66653321110 01111123346678999999999999997766 899999999999999999999
Q ss_pred CcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEE-----ecccccccCCCccccccC
Q 008038 494 TKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALGVETVGNIPNQALACG 568 (580)
Q Consensus 494 ~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~-----~~~~~~~~~~p~~~~~c~ 568 (580)
++.+...+|+.||++|||+.||++||++|||++||||.|+|||||..|+..||..++ .++.++++.+|+.+++||
T Consensus 452 ~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg 531 (543)
T PLN02991 452 SAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCG 531 (543)
T ss_pred CcccccccCCCCCCcccEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccc
Confidence 876566799999999999999999999999999999999999999999999999999 455578899999999998
Q ss_pred CCCc
Q 008038 569 LTGK 572 (580)
Q Consensus 569 ~~~~ 572 (580)
..++
T Consensus 532 ~~~~ 535 (543)
T PLN02991 532 RATG 535 (543)
T ss_pred cCCC
Confidence 6665
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-100 Score=824.15 Aligned_cols=505 Identities=28% Similarity=0.511 Sum_probs=401.3
Q ss_pred cCCceEEEEEEEEEEEeCCCC--ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDC--KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g--~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|+|++..++||| ..+++++|||++|||+|++++||+|+|+|+|+ ++++++|||||++|++++|+||++
T Consensus 23 ~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~-L~~~ttIHWHGl~q~~t~w~DGv~ 101 (596)
T PLN00044 23 AGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNA-LDEPLLLTWHGVQQRKSAWQDGVG 101 (596)
T ss_pred cCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeC-CCCCccEEECCccCCCCccccCCC
Confidence 677899999999999999999 55689999999999999999999999999999 789999999999999999999998
Q ss_pred CCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCC--CcceEEEEeecccCchHHHH
Q 008038 105 SISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--DGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~--d~e~~l~~~d~~~~~~~~~~ 181 (580)
+ +||||+||++|+|+|++ +++||||||+|++.|+++||+|+|||++++..+.|+.+ ++|.+|+++||++++...+.
T Consensus 102 ~-TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~ 180 (596)
T PLN00044 102 G-TNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALR 180 (596)
T ss_pred C-CcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHHHH
Confidence 8 99999999999999999 79999999999999999999999999998765566544 47999999999998865543
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCC--CccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQF--NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
..... +.. ...++.++|||++.. +|.. .. .....++++|++||+|||||||++....+.|+
T Consensus 181 ~~l~~-g~~-~~~~d~~lING~g~~~~n~~~--------------~~-~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fs 243 (596)
T PLN00044 181 RALDA-GDL-LGAPDGVLINAFGPYQYNDSL--------------VP-PGITYERINVDPGKTYRFRVHNVGVATSLNFR 243 (596)
T ss_pred HHHhc-CCC-CCCCCceEEcccCccccCCcc--------------cc-CCCccceEEECCCCEEEEEEEEccCCceEEEE
Confidence 22222 211 456899999999764 2221 00 12233589999999999999999999999999
Q ss_pred EeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec-CCC--CCCCCceEEEEecCCCCCCCC
Q 008038 260 VKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR-GRK--PATPPALTLLNYHPTSASKIP 336 (580)
Q Consensus 260 i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~-~~~--~~~~~~~ail~y~~~~~~~~~ 336 (580)
|+||+|+|||+||.+++|+.++.|.|++||||||+|++++.++++|||++... ..+ .+...+.|||+|.++......
T Consensus 244 IdgH~mtVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~ 323 (596)
T PLN00044 244 IQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASG 323 (596)
T ss_pred ECCCEEEEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCC
Confidence 99999999999999999999999999999999999999984345899998642 222 255678899999864332111
Q ss_pred CCCCCCCCC-CCCCCccccccccccccCC---CCCCCCCcceEEEEEeeee---------ecCCeEEEEEcceeccCCCC
Q 008038 337 LSPPPITPR-WDDYDHSKSFSNKIFALMG---SPKPPTNFHRRLTLLNTQN---------TINGFTKWAINNVSLTLPPT 403 (580)
Q Consensus 337 ~~~~p~~p~-~~~~~~~~~~~~~~~~~~~---~~~~p~~~~r~~~~~~~~~---------~~~~~~~~~iNg~~~~~p~~ 403 (580)
+ .|..|. +.+......+...++.... ..+++...++...+..... ...+...|+|||.+|..|++
T Consensus 324 ~--~P~~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~ 401 (596)
T PLN00044 324 P--LPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPST 401 (596)
T ss_pred C--CCCCCcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCC
Confidence 1 244443 5555433323333332211 1112222222222222111 01245799999999999999
Q ss_pred CcchhhhccCCccCCCC---CCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecC
Q 008038 404 PYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 480 (580)
Q Consensus 404 p~l~~~~~~~~~~f~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG 480 (580)
|.|.+.++++.+.|+.+ .|| +.....++.++.++.|++|||+|+|.... .|||||||
T Consensus 402 p~L~a~~~~~~gv~~~~fp~~pp--------------~~~~~~~t~v~~~~~n~~VeiV~qn~~~~------~HP~HLHG 461 (596)
T PLN00044 402 PLMLAQIFNVPGVFKLDFPNHPM--------------NRLPKLDTSIINGTYKGFMEIIFQNNATN------VQSYHLDG 461 (596)
T ss_pred cchhhhhccCCCcccCCCCCCCC--------------ccccccCceEEEcCCCCEEEEEEeCCCCC------CCCeeEcC
Confidence 99987777777755332 222 11234467789999999999999997555 89999999
Q ss_pred CCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEE-----ecc-c
Q 008038 481 HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALG-V 554 (580)
Q Consensus 481 ~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~-----~~~-~ 554 (580)
|+|+||+.|.|.|++.+...+|+.||++|||+.|+++||++|||++||||.|++||||+.|...||.++| .++ .
T Consensus 462 h~F~Vvg~G~G~~~~~~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~ 541 (596)
T PLN00044 462 YAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSN 541 (596)
T ss_pred ccEEEEeecCCCCCCCcccccccCCCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCcc
Confidence 9999999999999976667899999999999999999999999999999999999999999999999999 333 4
Q ss_pred ccccCCCccccccCCCCc
Q 008038 555 ETVGNIPNQALACGLTGK 572 (580)
Q Consensus 555 ~~~~~~p~~~~~c~~~~~ 572 (580)
++++.+|++++.||..++
T Consensus 542 ~~~~~pP~~~~~Cg~~~~ 559 (596)
T PLN00044 542 KTVLPIPDNAIFCGALSS 559 (596)
T ss_pred ccccCCCcccCccccccc
Confidence 678899999999997665
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-100 Score=822.31 Aligned_cols=497 Identities=29% Similarity=0.502 Sum_probs=398.3
Q ss_pred cccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 25 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.....+.+|+|+|++..+++||+++++++|||++|||+|++++||+|+|+|+|+ ++++++|||||+++++++|+||++
T Consensus 10 ~~~~~~~~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~-L~~~ttiHWHGl~q~~~~~~DGv~ 88 (536)
T PLN02792 10 FVKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHND-LDEPFLLSWNGVHMRKNSYQDGVY 88 (536)
T ss_pred HhhcCCeEEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeC-CCCCcCEeCCCcccCCCCccCCCC
Confidence 3556667899999999999999999999999999999999999999999999999 789999999999999999999998
Q ss_pred CCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCC-CCcceEEEEeecccCchHHHHh
Q 008038 105 SISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSDWWHRSVHEQEV 182 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~~~d~~~~~~~~~~~ 182 (580)
+ +||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||.+++.++.|+. +|+|++|+++||++.+...+..
T Consensus 89 ~-tqcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~ 167 (536)
T PLN02792 89 G-TTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKK 167 (536)
T ss_pred C-CcCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHH
Confidence 8 89999999999999999 6999999999999999999999999998655445544 5889999999999988655433
Q ss_pred hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeC
Q 008038 183 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN 262 (580)
Q Consensus 183 ~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~g 262 (580)
.+. .+......++.+||||++... .+.+++++||+|||||||+|....+.|+|+|
T Consensus 168 ~~~-~g~~~~~~~d~~liNG~~~~~------------------------~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~g 222 (536)
T PLN02792 168 ILD-GGRKLPLMPDGVMINGQGVSY------------------------VYSITVDKGKTYRFRISNVGLQTSLNFEILG 222 (536)
T ss_pred Hhh-ccCcCCCCCCEEEEeccCCCC------------------------cceEEECCCCEEEEEEEEcCCCceEEEEECC
Confidence 222 222213378999999998652 1379999999999999999999999999999
Q ss_pred eeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCC
Q 008038 263 HKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 263 h~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
|+|+|||+||++++|..+++|.|++||||||+|++++ ++|+|||++.....+ ....+.|||+|+++..... ..|.
T Consensus 223 H~~tVI~~DG~~v~p~~~~~l~i~~GqRydVlV~a~~-~~g~Y~i~a~~~~~~-~~~~~~ail~Y~g~~~~~~---~~p~ 297 (536)
T PLN02792 223 HQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQ-PPQNYSIVVSTRFIA-AKVLVSSTLHYSNSKGHKI---IHAR 297 (536)
T ss_pred cEEEEEEeCCccCCCcceeEEEEccCceEEEEEEcCC-CCceEEEEEEeccCC-CCCceEEEEEECCCCCCCC---CCCC
Confidence 9999999999999999999999999999999999988 578999999864332 3456789999986543211 1233
Q ss_pred CCCCCCCCccccccccccccCC---CCCCCCC--------cceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhc
Q 008038 343 TPRWDDYDHSKSFSNKIFALMG---SPKPPTN--------FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 411 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~---~~~~p~~--------~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~ 411 (580)
.|.+++......+......... ....|.. .++++.+........+...|+|||.+|..|++|.|.+.++
T Consensus 298 ~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~p~L~a~~~ 377 (536)
T PLN02792 298 QPDPDDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHF 377 (536)
T ss_pred CCCcCCccccccchhhhhhccCCCCCCCCCCcccccceeccceeEEecccccccCceeEEEECCcccCCCCCchhhhhhh
Confidence 3444444332222111111111 1111211 1233333322222234578999999999999999988776
Q ss_pred cCCccCCC----CCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEe
Q 008038 412 GLKDAFDQ----NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG 487 (580)
Q Consensus 412 ~~~~~f~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~ 487 (580)
++.+.|.. +.||..+ ....++.++.++.|++|||+|+|.... .||||||||+||||+
T Consensus 378 ~~~g~~~~~~~~~~p~~~~-------------~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg 438 (536)
T PLN02792 378 KIKGVFKVGSIPDKPRRGG-------------GMRLDTSVMGAHHNAFLEIIFQNREKI------VQSYHLDGYNFWVVG 438 (536)
T ss_pred ccCCCcCcccCccCCcccC-------------CCccCceEEEcCCCCEEEEEEECCCCC------CCCeeeCCCceEEEe
Confidence 66554421 1222111 123467789999999999999997665 899999999999999
Q ss_pred ecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEE-----ecccccccCCCc
Q 008038 488 RGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALGVETVGNIPN 562 (580)
Q Consensus 488 ~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~-----~~~~~~~~~~p~ 562 (580)
+|.|.|++.+...+|+.||++|||+.|+++||++|||++||||.|+||||+..|+..||.++| .++.++++.+|+
T Consensus 439 ~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~ 518 (536)
T PLN02792 439 INKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPK 518 (536)
T ss_pred ecCCCCCcccccccCcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCc
Confidence 999999876667899999999999999999999999999999999999999999999999999 455678899999
Q ss_pred cccccCCCCc
Q 008038 563 QALACGLTGK 572 (580)
Q Consensus 563 ~~~~c~~~~~ 572 (580)
+.+.||..+.
T Consensus 519 ~~~~Cg~~~~ 528 (536)
T PLN02792 519 NALLCGRASN 528 (536)
T ss_pred ccCccccccC
Confidence 9999986655
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-100 Score=823.97 Aligned_cols=514 Identities=28% Similarity=0.538 Sum_probs=397.3
Q ss_pred HHHHHHHHHhhccccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccc
Q 008038 13 TCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI 92 (580)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~ 92 (580)
+|+.|++.......+.+.+++|+|+|++..+++||+++++++|||++|||+|++++||+|+|+|+|+ ++++++|||||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~-l~~~ttiHWHGi 87 (552)
T PLN02354 9 VLLCLAAAVALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNN-LDEPFLLTWSGI 87 (552)
T ss_pred HHHHHHHHHHHhhhccccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEEC-CCCCcccccccc
Confidence 4555555555555566789999999999999999999999999999999999999999999999999 689999999999
Q ss_pred cccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCC-CCcceEEEEe
Q 008038 93 RQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLS 170 (580)
Q Consensus 93 ~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~~~ 170 (580)
+|.+++|+||+|+ |||||+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++...+.|+. +|+|++|+++
T Consensus 88 ~q~~~~~~DGv~~-TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l~l~ 166 (552)
T PLN02354 88 QQRKNSWQDGVPG-TNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIG 166 (552)
T ss_pred cCCCCcccCCCcC-CcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCceEEEEee
Confidence 9999999999999 99999999999999998 7999999999999999999999999998865455553 4689999999
Q ss_pred ecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeec
Q 008038 171 DWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 250 (580)
Q Consensus 171 d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNa 250 (580)
||++.+...+...+.. +.. .+.++.+||||+....| ....+.+++++||+|||||||+
T Consensus 167 Dw~~~~~~~~~~~~~~-g~~-~~~~d~~liNG~~~~~~--------------------~~~~~~~~v~~Gk~yRlRiINa 224 (552)
T PLN02354 167 DWYTKSHTALKKFLDS-GRT-LGRPDGVLINGKSGKGD--------------------GKDEPLFTMKPGKTYRYRICNV 224 (552)
T ss_pred eeccCCHHHHHHHHhc-CCC-CCCCCeEEEeCCcCCCC--------------------CCCceEEEECCCCEEEEEEEec
Confidence 9999986554432222 221 34689999999976511 1124579999999999999999
Q ss_pred CCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 251 TALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 251 g~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
|....+.|+|+||+|+|||+||++++|+.++++.|++||||||+|++++ ++|+|||++.....+ ......|+|+|.++
T Consensus 225 ~~~~~~~f~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~-~~g~Y~i~a~~~~~~-~~~~~~ail~Y~g~ 302 (552)
T PLN02354 225 GLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQ-APKDYYMVASTRFLK-KVLTTTGIIRYEGG 302 (552)
T ss_pred CCCceEEEEECCceEEEEEeCCcccCCcceeEEEEccCceEEEEEECCC-CCCcEEEEEeccccC-CCccEEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999987 568999998743222 34567899999865
Q ss_pred CCCCCCCCCCCCCCC-CC-CCCccccccccccccCCCCCC-------CCCcceEEEEEeeeeecCCeEEEEEcceeccCC
Q 008038 331 SASKIPLSPPPITPR-WD-DYDHSKSFSNKIFALMGSPKP-------PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP 401 (580)
Q Consensus 331 ~~~~~~~~~~p~~p~-~~-~~~~~~~~~~~~~~~~~~~~~-------p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p 401 (580)
.....+ ..|..|. +. ......++...+......+.+ ....++++.+.......++...|++||++|..|
T Consensus 303 ~~~~~~--~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNn~s~~~p 380 (552)
T PLN02354 303 KGPASP--ELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDP 380 (552)
T ss_pred CCCCCC--CCCCCCcccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCceEEEEECCccCCCC
Confidence 432111 1111111 00 000001111111111100100 012344444443222234567899999999999
Q ss_pred CCCcchhhhccCC-ccCC----CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCe
Q 008038 402 PTPYLGSIKYGLK-DAFD----QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPW 476 (580)
Q Consensus 402 ~~p~l~~~~~~~~-~~f~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~ 476 (580)
+.|.|.+.+.++. +.++ ++.+|..+ .....++.++.++.|++|||+|+|.+.. .|||
T Consensus 381 ~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~------------~~~~~~~~v~~~~~~~~VeiVi~n~~~~------~HP~ 442 (552)
T PLN02354 381 ETPLKLAEYFGVADKVFKYDTIKDNPPAKI------------TKIKIQPNVLNITFRTFVEIIFENHEKS------MQSW 442 (552)
T ss_pred CCChHHhhhhcccCCccccCccccCCcccc------------CccccCCeeEEcCCCCEEEEEEeCCCCC------CCCC
Confidence 9999887764432 3332 11222110 0123456789999999999999998665 8999
Q ss_pred eecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEe--ccc
Q 008038 477 HLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLA--LGV 554 (580)
Q Consensus 477 HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~--~~~ 554 (580)
|||||+||||+++.|.|++.+...+|+.||++|||+.||++||++|||++||||.|+|||||..|+..||.++|. +++
T Consensus 443 HLHGh~F~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~ 522 (552)
T PLN02354 443 HLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPE 522 (552)
T ss_pred cCCCccEEEEeecCCCCCccccccCCcCCCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCc
Confidence 999999999999999998755567899999999999999999999999999999999999999999999988883 333
Q ss_pred ---ccccCCCccccccCCCCc
Q 008038 555 ---ETVGNIPNQALACGLTGK 572 (580)
Q Consensus 555 ---~~~~~~p~~~~~c~~~~~ 572 (580)
++++.+|++.+.|+..++
T Consensus 523 ~~~~~~~~~P~~~~~C~~~~~ 543 (552)
T PLN02354 523 RSLRDEYNMPENALLCGKVKG 543 (552)
T ss_pred cccCcCCCCCccccccccccC
Confidence 344568999999996665
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-99 Score=808.46 Aligned_cols=495 Identities=30% Similarity=0.553 Sum_probs=384.4
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
+.+++++|+|+|++...++||+.+++++|||++|||+||+++||+|+|+|+|+ ++++++|||||+++.+++|+||+|+
T Consensus 22 ~~a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~-L~~~ttiHWHGl~~~~~~~~DGv~g- 99 (545)
T PLN02168 22 AFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNN-LTEPFLMTWNGLQLRKNSWQDGVRG- 99 (545)
T ss_pred ccccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeC-CCCCccEeeCCccCCCCCCcCCCCC-
Confidence 45789999999999999999999999999999999999999999999999999 6899999999999999999999999
Q ss_pred ccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHHHhhh
Q 008038 107 SQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
+||||+||++|+|+|++ +++||||||||...|+.+||+|+|||+++++...|+ .+|+|++|+++||++.+...+....
T Consensus 100 tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~ 179 (545)
T PLN02168 100 TNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASL 179 (545)
T ss_pred CcCCCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhh
Confidence 99999999999999999 699999999999999999999999999987655554 4589999999999998754433222
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~ 264 (580)
.. +.. ...++.+||||++.. .+++++++|++|||||||++....+.|+|+||+
T Consensus 180 ~~-g~~-~~~~d~~liNG~~~~-------------------------~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~ 232 (545)
T PLN02168 180 DN-GHS-LPNPDGILFNGRGPE-------------------------ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHD 232 (545)
T ss_pred hc-CCC-CCCCCEEEEeccCCC-------------------------cceEEeCCCCEEEEEEEeccCCceEEEEECCcE
Confidence 22 222 346899999999743 127999999999999999999999999999999
Q ss_pred eEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCc---ceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCC
Q 008038 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY---NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPP 341 (580)
Q Consensus 265 ~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g---~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p 341 (580)
|+|||+||.+++|..++++.|++||||||+|++++.+.| +|||++.....+ ....+.|+|+|+++.... ..+.|
T Consensus 233 ~tVIa~DG~~v~p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~-~~~~~~ail~Y~~~~~~~--~~p~p 309 (545)
T PLN02168 233 MLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTD-AYLGGVALIRYPNSPLDP--VGPLP 309 (545)
T ss_pred EEEEEECCeECCCceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccC-CCcceEEEEEECCCCCCC--CCCCC
Confidence 999999999999999999999999999999999864434 899999864333 346778999998653321 11123
Q ss_pred CCCCCCCCCcccccccccc---ccCCCCCCC--------CCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhh
Q 008038 342 ITPRWDDYDHSKSFSNKIF---ALMGSPKPP--------TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 410 (580)
Q Consensus 342 ~~p~~~~~~~~~~~~~~~~---~~~~~~~~p--------~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~ 410 (580)
..|.+.+.....++...+. .+......+ ...++++.+........+...|+|||.+|..|.+|.|.+.+
T Consensus 310 ~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~ 389 (545)
T PLN02168 310 LAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDH 389 (545)
T ss_pred CCCcccccccccchhhhhhhcCCCCCCCCCCcccccccccccceeEEecccccccCceEEEEECCCccCCCCCchhhhhh
Confidence 3344333322222211111 110001111 11234443332111123567899999999999999887665
Q ss_pred ccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecC
Q 008038 411 YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE 490 (580)
Q Consensus 411 ~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~ 490 (580)
+++.+.+... .| . ..+.+.....++.++.++.|++|+|+|+|.... .||||||||+||||+++.
T Consensus 390 ~~~~~~~~~~----~~----~--~~p~~~~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg~g~ 453 (545)
T PLN02168 390 FQLNDTIIPG----MF----P--VYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFS------LESYHIDGYNFFVVGYGF 453 (545)
T ss_pred cccccccccC----CC----c--cCCCcCccccCceEEEecCCCEEEEEEeCCCCC------CCCeeeCCCceEEEECCC
Confidence 5443222111 00 0 000011122346789999999999999997655 899999999999999999
Q ss_pred CCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec------c-----cccccC
Q 008038 491 GKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL------G-----VETVGN 559 (580)
Q Consensus 491 g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~------~-----~~~~~~ 559 (580)
|.|++.+...+|+.||++|||+.||++||++|||++||||.|+|||||.+|...||.+++.+ . .++++.
T Consensus 454 g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~ 533 (545)
T PLN02168 454 GAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENP 533 (545)
T ss_pred CCCCccccccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccC
Confidence 99987555679999999999999999999999999999999999999977777777666633 1 345678
Q ss_pred CCccccccCC
Q 008038 560 IPNQALACGL 569 (580)
Q Consensus 560 ~p~~~~~c~~ 569 (580)
+|+.++.||.
T Consensus 534 ~P~~~~~cg~ 543 (545)
T PLN02168 534 IPGNVIRCGK 543 (545)
T ss_pred CChhhccccc
Confidence 9999999983
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-98 Score=815.05 Aligned_cols=511 Identities=35% Similarity=0.639 Sum_probs=393.7
Q ss_pred CceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+ ++++++|||||+++.+++|+||+|++||
T Consensus 1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~-l~~~tsiHwHGl~q~~~~~~DGv~~vTq 79 (539)
T TIGR03389 1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNN-VQYNVTIHWHGVRQLRNGWADGPAYITQ 79 (539)
T ss_pred CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeC-CCCCeeEecCCCCCCCCCCCCCCccccc
Confidence 468999999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred ccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHHHhhhcC
Q 008038 109 CPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS 186 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~~~~~~~ 186 (580)
|+|+||++|+|+|++ +++||||||||...+. .||+|+|||+++.+...|+ .+|+|++|+++||++++....+.....
T Consensus 80 ~pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (539)
T TIGR03389 80 CPIQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQ 158 (539)
T ss_pred CCcCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHh
Confidence 999999999999999 6999999999987665 5899999999987655554 358999999999999887665544333
Q ss_pred CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeE
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMV 266 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~ 266 (580)
.+.. +..++.++|||+..+. + .|+ ....+.+++++||+|||||||+|....+.|+|+||+|+
T Consensus 159 ~~~~-~~~~d~~liNG~~~~~------~------~~~-----~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~ 220 (539)
T TIGR03389 159 TGGA-PNVSDAYTINGHPGPL------Y------NCS-----SKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLT 220 (539)
T ss_pred cCCC-CCccceEEECCCcCCC------C------CCC-----CCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEE
Confidence 2222 4467899999997541 0 232 12345899999999999999999999999999999999
Q ss_pred EEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC---CCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 267 VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 267 via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
|||+||.+++|+.++++.|++||||||+|++++ ++|+|||++.....+. ......|+|+|.+......+. .+..
T Consensus 221 VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~-~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~--~~~~ 297 (539)
T TIGR03389 221 VVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQ-SPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPI--LPTL 297 (539)
T ss_pred EEEeCCcccCceEeCeEEecCCCEEEEEEECCC-CCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCC--CCCC
Confidence 999999999999999999999999999999987 5689999998654332 235678999998644322121 1122
Q ss_pred CCCCCCCccccccccccccC-C--CCCCCCCcceEEEEEeeeee-----------cCCeEEEEEcceeccCCCCCcchhh
Q 008038 344 PRWDDYDHSKSFSNKIFALM-G--SPKPPTNFHRRLTLLNTQNT-----------INGFTKWAINNVSLTLPPTPYLGSI 409 (580)
Q Consensus 344 p~~~~~~~~~~~~~~~~~~~-~--~~~~p~~~~r~~~~~~~~~~-----------~~~~~~~~iNg~~~~~p~~p~l~~~ 409 (580)
|.+++......+...+..+. + ....+..+++++.+....+. ....+.|+||+++|..|..|.|.+.
T Consensus 298 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~ 377 (539)
T TIGR03389 298 PAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAH 377 (539)
T ss_pred CCCCchhhhhHHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhh
Confidence 22222211111111111111 0 11122345666554443211 1234789999999999999988776
Q ss_pred hccCCccCC---CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEE
Q 008038 410 KYGLKDAFD---QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 486 (580)
Q Consensus 410 ~~~~~~~f~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv 486 (580)
+.++.+.+. ++.+|..+. ++....+.+.....++.++.++.|++|+++|+|.+.+ ....||||||||+|+||
T Consensus 378 ~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~---~~~~HP~HLHGh~F~Vl 452 (539)
T TIGR03389 378 YFGISGVFTTDFPANPPTKFN--YTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSIL---GSENHPIHLHGYNFFVV 452 (539)
T ss_pred hcccCCccccCCccCCCcccc--CCCCCcccccccccCceEEEecCCCEEEEEEecCCcC---CCCCCcEeEcCCceEEE
Confidence 655444322 223343331 1111111111233467789999999999999996422 12279999999999999
Q ss_pred eecCCCCCc-ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec-----ccccccCC
Q 008038 487 GRGEGKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL-----GVETVGNI 560 (580)
Q Consensus 487 ~~~~g~~~~-~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~-----~~~~~~~~ 560 (580)
+++.|.|+. .+...+|+.||++|||+.||++||++|||++||||.|+|||||+||+..||+++|.+ +.++++++
T Consensus 453 g~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~ 532 (539)
T TIGR03389 453 GTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPP 532 (539)
T ss_pred EeccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCC
Confidence 999998875 233468999999999999999999999999999999999999999999999999955 34578999
Q ss_pred Ccccccc
Q 008038 561 PNQALAC 567 (580)
Q Consensus 561 p~~~~~c 567 (580)
|+.++.|
T Consensus 533 p~~~~~c 539 (539)
T TIGR03389 533 PSDLPSC 539 (539)
T ss_pred CccCCCC
Confidence 9999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-92 Score=751.30 Aligned_cols=514 Identities=39% Similarity=0.677 Sum_probs=413.9
Q ss_pred hhccccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCC
Q 008038 22 VFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWAD 101 (580)
Q Consensus 22 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~D 101 (580)
.....+.++++.|+|++++..+.++|.+++++++||++|||+|+|++||+|.|+|+|+ ++++++|||||+++..++|+|
T Consensus 19 ~~~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~-~~~~~sihWhGv~q~kn~w~D 97 (563)
T KOG1263|consen 19 VFFSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNR-LDEPFSIHWHGVRQRKNPWQD 97 (563)
T ss_pred HHHhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeC-CCCceEEEeccccccCCcccc
Confidence 3344578999999999999999999999999999999999999999999999999999 789999999999999999999
Q ss_pred CCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCC-CCcceEEEEeecccC-chH
Q 008038 102 GTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSDWWHR-SVH 178 (580)
Q Consensus 102 G~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~~~d~~~~-~~~ 178 (580)
| +.+|||||+||++|+|+|++ +|.||||||+|+++|+++|++|+|||.++...+.|+. +|+|++|+++||+.+ ...
T Consensus 98 G-~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~ 176 (563)
T KOG1263|consen 98 G-VYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHK 176 (563)
T ss_pred C-CccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHH
Confidence 9 99999999999999999999 6999999999999999999999999999987767777 489999999999996 555
Q ss_pred HHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEE
Q 008038 179 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNL 258 (580)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~ 258 (580)
.+...... +...+..+|..+|||+..+ + | .| .+++++++||+|||||+|+|....+.|
T Consensus 177 ~l~~~~~~-~~~~p~~~D~~~iNg~~g~---~---~------~~---------~~~l~v~pGktY~lRiiN~g~~~~l~F 234 (563)
T KOG1263|consen 177 NLKNFLDR-TGALPNPSDGVLINGRSGF---L---Y------NC---------TPTLTVEPGKTYRLRIINAGLNTSLNF 234 (563)
T ss_pred HHHHhhcc-CCCCCCCCCceEECCCCCc---c---c------Cc---------eeEEEEcCCCEEEEEEEccccccceEE
Confidence 54444443 3333445899999999865 1 1 12 358999999999999999999999999
Q ss_pred EEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC---CCCCceEEEEecCCCCCCC
Q 008038 259 AVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKI 335 (580)
Q Consensus 259 ~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~ 335 (580)
+|.+|+|+||++||.+++|+.++++.|.||||+||+|++++ .+++|+|.+.....+. ...+..++++|.+......
T Consensus 235 ~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq-~~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s 313 (563)
T KOG1263|consen 235 SIANHQLTVVEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQ-SPGDYYIAASPYFDASNVPFNLTTTGILRYSGSTHPAS 313 (563)
T ss_pred EECCeEEEEEEecceEEeeeeeceEEEcCCcEEEEEEeCCC-CCCcEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCc
Confidence 99999999999999999999999999999999999999999 4569999998755542 2567789999986222111
Q ss_pred CC-CCCCCCCCCCCCCccccccccccccCC---CCCCCCCcceEEEEEe--------eeeecCCeEEEEEcceeccCCCC
Q 008038 336 PL-SPPPITPRWDDYDHSKSFSNKIFALMG---SPKPPTNFHRRLTLLN--------TQNTINGFTKWAINNVSLTLPPT 403 (580)
Q Consensus 336 ~~-~~~p~~p~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~r~~~~~~--------~~~~~~~~~~~~iNg~~~~~p~~ 403 (580)
.. ...+.+|...+......+...++.... ..+.|...++...+.. .....++...++||+.+|..|++
T Consensus 314 ~~~~~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~t 393 (563)
T KOG1263|consen 314 EKLPIYPFLPPGNDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPKT 393 (563)
T ss_pred ccCcccccCCcccCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCCC
Confidence 11 112234444454444445444444432 1222333333333322 22223568899999999999999
Q ss_pred CcchhhhccCCc-cCCC---CCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeec
Q 008038 404 PYLGSIKYGLKD-AFDQ---NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLH 479 (580)
Q Consensus 404 p~l~~~~~~~~~-~f~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlH 479 (580)
|.+.+.++...+ .+.. ..||..+ ++. .++.++.++.++.+++||++|+|.+.. ....||||||
T Consensus 394 p~~l~~~~~~~~~~~~~d~p~~P~~~~--~~~--------~~~~~t~v~~~~~~~~veIVlqN~~~~---~~~~hp~HLH 460 (563)
T KOG1263|consen 394 PSLLAAYFKNIPGYFTNDFPDKPPIKF--DYT--------GPTLGTSVMKLEFNSFVEIVLQNTSTG---TQENHPNHLH 460 (563)
T ss_pred chhhhhhhccCCccccCccCCCCcccc--CCc--------cccccceEEEeecCCEEEEEEeCCccc---cCCCCcccee
Confidence 987766644443 2211 2222111 111 147889999999999999999998765 3446999999
Q ss_pred CCCeEEEeecCCCCCc-ccc-cccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccccc-
Q 008038 480 GHDFWVLGRGEGKFTK-EDE-KKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVET- 556 (580)
Q Consensus 480 G~~F~vv~~~~g~~~~-~~~-~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~- 556 (580)
||.|+|++.+.|.|++ .+. +.+|+.+|+.||||.||||||++|||.|||||.|++|||+.+|...||.++|.|...+
T Consensus 461 G~~F~Vvg~g~G~~~~~~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~ 540 (563)
T KOG1263|consen 461 GYNFYVVGYGFGNWDPAKDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEE 540 (563)
T ss_pred ceEEEEEEecccccCcCcChhhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCc
Confidence 9999999999999998 234 7899999999999999999999999999999999999999999999999999876643
Q ss_pred ----ccCCCccccccCCCCcC
Q 008038 557 ----VGNIPNQALACGLTGKR 573 (580)
Q Consensus 557 ----~~~~p~~~~~c~~~~~~ 573 (580)
+..+|.+.+.||.-+..
T Consensus 541 ~~~~~~~~P~~~~~cg~~~~~ 561 (563)
T KOG1263|consen 541 SLSSEYPPPKNLPKCGRASGI 561 (563)
T ss_pred cCCcCCCCCCCcccccccCCc
Confidence 34799999999987753
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-92 Score=760.20 Aligned_cols=491 Identities=32% Similarity=0.595 Sum_probs=373.5
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCC
Q 008038 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPIN 112 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~ 112 (580)
.|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|..++++|||||+++.+++|+||+|++|||+|+
T Consensus 10 ~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI~ 89 (538)
T TIGR03390 10 DHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPIP 89 (538)
T ss_pred cEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCCC
Confidence 48999999999999999999999999999999999999999999999656899999999999999999999999999999
Q ss_pred CCCeEEEEEEc--CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCCCCC
Q 008038 113 PGETYLYRFKV--DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLR 190 (580)
Q Consensus 113 pG~~~~y~f~~--~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~ 190 (580)
||++|+|+|++ +++||||||||.+.|+. ||+|+|||+++.. .++.||+|++|+|+||+++...++...+...+..
T Consensus 90 PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~--~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~ 166 (538)
T TIGR03390 90 PGHFFDYEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEP--PPYKYDDERILLVSDFFSATDEEIEQGLLSTPFT 166 (538)
T ss_pred CCCcEEEEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCc--cCCCccCcEEEEEeCCCCCCHHHHHhhhhccCCc
Confidence 99999999997 58999999999999986 5999999998643 3667899999999999999877655444433323
Q ss_pred CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee-eEEEE
Q 008038 191 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK-MVVVE 269 (580)
Q Consensus 191 ~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~-~~via 269 (580)
+..+++.++|||++.+.|... .++ ....+..+.++|++||+|||||||+|....+.|+|+||+ |+|||
T Consensus 167 ~~~~~d~~liNG~~~~~~~~~---------~~~--~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa 235 (538)
T TIGR03390 167 WSGETEAVLLNGKSGNKSFYA---------QIN--PSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIE 235 (538)
T ss_pred cCCCCceEEECCccccccccc---------ccc--CCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEE
Confidence 345678999999977633110 000 111234568999999999999999999999999999999 99999
Q ss_pred ECCcccCceeeeeEEEcCCceEEEEEEeCCCC------CcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 270 ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 270 ~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~------~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
+||++++|+.++.+.|++||||||+|++++.. +++||||+.....+ +.....|||+|.++.....+. .|..
T Consensus 236 ~DG~~~~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~-~~~~~~aiL~Y~~~~~~~~~~--~p~~ 312 (538)
T TIGR03390 236 ADGSYTKPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRP-KVYRGYAVLRYRSDKASKLPS--VPET 312 (538)
T ss_pred eCCCCCCceEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCC-CcceEEEEEEeCCCCCCCCCC--CCCC
Confidence 99999999999999999999999999998742 48999999765433 445678999997543322211 1111
Q ss_pred CCCC---CCCccccccccccccCCC----CCCCCCcceEEEEEeeeee--cCCeEEEEEcceeccC--CCCCcchhhhcc
Q 008038 344 PRWD---DYDHSKSFSNKIFALMGS----PKPPTNFHRRLTLLNTQNT--INGFTKWAINNVSLTL--PPTPYLGSIKYG 412 (580)
Q Consensus 344 p~~~---~~~~~~~~~~~~~~~~~~----~~~p~~~~r~~~~~~~~~~--~~~~~~~~iNg~~~~~--p~~p~l~~~~~~ 412 (580)
+... ......++ .+...... .+++..+++++.+...... .++...|++||++|.. |..|.|.....+
T Consensus 313 ~~~~~~~~~~~~~~~--~l~pl~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~ 390 (538)
T TIGR03390 313 PPLPLPNSTYDWLEY--ELEPLSEENNQDFPTLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYEN 390 (538)
T ss_pred CCCCccCcchhhhhe--eeEecCccccCCCCCCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcC
Confidence 1111 11011111 11111110 1223345777777665432 2456899999999986 688888766532
Q ss_pred CCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCC--CCCCCCCCeeecCCCeEEEeecC
Q 008038 413 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR--PNLSEIHPWHLHGHDFWVLGRGE 490 (580)
Q Consensus 413 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~--~~~~~~HP~HlHG~~F~vv~~~~ 490 (580)
. + ...++ + +. ..........+.++.++.|++|+|+|+|..... ......||||||||+|+||++|.
T Consensus 391 ~---~-~~~~~--~----~~--~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~ 458 (538)
T TIGR03390 391 G---L-PATPN--Y----TA--ALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGD 458 (538)
T ss_pred C---C-CcCCC--c----cc--ccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccc
Confidence 1 1 00000 1 00 000001122345688999999999999964210 01123899999999999999999
Q ss_pred CCCCc-ccccccCCCCCCccceEEeC----------CCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 491 GKFTK-EDEKKFNLKNPPLKNTAVIF----------PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 491 g~~~~-~~~~~~~~~~p~~rDTv~vp----------p~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
|.|++ .+...+++.||++|||+.|| +++|++|||++||||.|+|||||.+|+.+||+++|.+..
T Consensus 459 G~~~~~~~~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~ 533 (538)
T TIGR03390 459 GEYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGD 533 (538)
T ss_pred cccCCccChhhhccCCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCC
Confidence 99986 22346788999999999996 789999999999999999999999999999999998754
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-80 Score=665.80 Aligned_cols=421 Identities=30% Similarity=0.482 Sum_probs=325.4
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccC
Q 008038 32 RHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i 111 (580)
++|+|++++..++++|+.+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||+|+++||+|
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I 122 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNT-LPEDTSIHWHGILLP--FQMDGVPGVSFAGI 122 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcC-CCCCceEEcCCCcCC--ccccCCCccccccc
Confidence 789999999999999999999999999999999999999999999999 789999999999985 67999999999999
Q ss_pred CCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCC----
Q 008038 112 NPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR---- 187 (580)
Q Consensus 112 ~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~---- 187 (580)
+||++|+|+|++.++||||||||...|+..||+|+|||+++.. .|+.||+|++|+|+||++.+..+++..+...
T Consensus 123 ~PG~s~~Y~f~~~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~--~p~~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~~ 200 (587)
T TIGR01480 123 APGETFTYRFPVRQSGTYWYHSHSGFQEQAGLYGPLIIDPAEP--DPVRADREHVVLLSDWTDLDPAALFRKLKVMAGHD 200 (587)
T ss_pred CCCCeEEEEEECCCCeeEEEecCchhHhhccceEEEEECCCcc--ccCCCCceEEEEeeecccCCHHHHHHhhhcccccc
Confidence 9999999999999999999999999999999999999997643 4678899999999999987765554332210
Q ss_pred -----------------CCC--------C-------------CCCCceEEeCccCCCCccccccccCCCcccccccCCCC
Q 008038 188 -----------------PLR--------W-------------IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQ 229 (580)
Q Consensus 188 -----------------~~~--------~-------------~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (580)
+.. | .+....+||||+...
T Consensus 201 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~~----------------------- 257 (587)
T TIGR01480 201 NYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPA----------------------- 257 (587)
T ss_pred cccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccCC-----------------------
Confidence 000 0 001123567766532
Q ss_pred CCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 230 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 230 ~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
..+++.+++|++|||||||+|+.+.+.|+|+||+|+||++||++++|+.++.+.|++||||||+|+.++ .|.|+|.+
T Consensus 258 -~~~~~~v~~G~rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~~--~g~~~i~a 334 (587)
T TIGR01480 258 -GNWTGLFRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPTG--DDAFTIFA 334 (587)
T ss_pred -CCceEEECCCCEEEEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecCC--CceEEEEE
Confidence 223689999999999999999999999999999999999999999999999999999999999999875 57899998
Q ss_pred eecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCc-------------------cc-----------c---c-
Q 008038 310 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDH-------------------SK-----------S---F- 355 (580)
Q Consensus 310 ~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~-------------------~~-----------~---~- 355 (580)
...+. ...+.++|.+.+......++..++......+... .. + .
T Consensus 335 ~~~~~---~~~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (587)
T TIGR01480 335 QDSDR---TGYARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMA 411 (587)
T ss_pred EecCC---CceEEEEEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCcccccc
Confidence 76543 3566778887643211111111110011101000 00 0 0
Q ss_pred --------------------------------------------cccccccCCCCCCCCCcceEEEEEeeeeecCCeEEE
Q 008038 356 --------------------------------------------SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 356 --------------------------------------------~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
...+..+.+ ..++..++|++.+....+ ...+.|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~-~~~~~~p~r~~~~~L~g~--m~~~~w 488 (587)
T TIGR01480 412 MDASPKHPASEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFP-PPDGRAPGREIELHLTGN--MERFAW 488 (587)
T ss_pred ccccccCcccccCCccccccccCcccccCCCCcccccCCcceeehhhcccccc-ccCcCCCCceEEEEEcCC--CceeEE
Confidence 000000000 011224566666655432 235679
Q ss_pred EEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCC
Q 008038 392 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 471 (580)
Q Consensus 392 ~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~ 471 (580)
+|||+.|.. .+| +.++.|+.|+|+|.|.+.+
T Consensus 489 tiNG~~~~~--------------------~~p------------------------l~v~~Gervri~l~N~t~~----- 519 (587)
T TIGR01480 489 SFDGEAFGL--------------------KTP------------------------LRFNYGERLRVVLVNDTMM----- 519 (587)
T ss_pred EECCccCCC--------------------CCc------------------------eEecCCCEEEEEEECCCCC-----
Confidence 999986521 111 6799999999999998888
Q ss_pred CCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEe
Q 008038 472 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 551 (580)
Q Consensus 472 ~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~ 551 (580)
.|||||||+.|+++..+ |.+ +.++||+.|+||+++.++|+++|||.|+||||++.|++.|||+.|.
T Consensus 520 -~HpmHlHG~~f~v~~~~-G~~------------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~ 585 (587)
T TIGR01480 520 -AHPIHLHGMWSELEDGQ-GEF------------QVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVT 585 (587)
T ss_pred -CcceeEcCceeeeecCC-Ccc------------cccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEE
Confidence 99999999999998652 322 3678999999999999999999999999999999999999999997
Q ss_pred c
Q 008038 552 L 552 (580)
Q Consensus 552 ~ 552 (580)
+
T Consensus 586 v 586 (587)
T TIGR01480 586 V 586 (587)
T ss_pred e
Confidence 6
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-74 Score=615.93 Aligned_cols=411 Identities=24% Similarity=0.352 Sum_probs=296.5
Q ss_pred eEEEEEEEEEEEeCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 31 TRHYKWEVEYMFWSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
...|+|++++...++++.. ..+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++.+ .+||+| ||
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~-L~~~ttiHwHGl~~~~--~~DG~p---q~ 118 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQ-LPEETTLHWHGLEVPG--EVDGGP---QG 118 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEEC-CCCCccEEcccccCCC--ccCCCC---CC
Confidence 3469999999999976654 469999999999999999999999999999 7899999999999974 599987 89
Q ss_pred cCCCCCeEEEEEEcC-CCcceeeecCc----chhhccccEEEEEEEcCCCCCC--CCCCC-cceEEEEeecccCchHHHH
Q 008038 110 PINPGETYLYRFKVD-KAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKE--PFHYD-GEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~-~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~--p~~~d-~e~~l~~~d~~~~~~~~~~ 181 (580)
+|.||++|+|+|+++ ++||||||||. +.|+.+||+|+|||+++.+... |..|+ .|++|+++||+++......
T Consensus 119 ~I~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~ 198 (523)
T PRK10965 119 IIAPGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQID 198 (523)
T ss_pred CCCCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCcee
Confidence 999999999999995 58999999994 7999999999999999866432 33343 6899999999997654432
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV- 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i- 260 (580)
.............++.++|||+.++ .+.+ ++++|||||||+|..+.+.|++
T Consensus 199 ~~~~~~~~~~g~~gd~~lVNG~~~p---------------------------~~~v-~~~~~RlRliNas~~r~~~l~~~ 250 (523)
T PRK10965 199 YQLDVMTAAVGWFGDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNLATS 250 (523)
T ss_pred ccccccccccCccCCeEEECCcccc---------------------------eeec-CCCEEEEEEEeccCCceEEEEEc
Confidence 2111100011235789999999876 4666 4679999999999999999998
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCCCCCCC
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKI 335 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~~~~~~ 335 (580)
++|+|+|||.||+++ +|..+++|.|+|||||||+|++++ ++.|.+......... .......++++......
T Consensus 251 dg~~~~vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 326 (523)
T PRK10965 251 DGRPLYVIASDGGLLAEPVKVSELPILMGERFEVLVDTSD--GKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLIS-- 326 (523)
T ss_pred CCceEEEEEeCCCcccCccEeCeEEECccceEEEEEEcCC--CceEEEEEecccCcccccccCCCceeEEEEeccCcC--
Confidence 899999999999987 899999999999999999999986 678888775332211 01123455555532111
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-----------ec-----C-------------
Q 008038 336 PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-----------TI-----N------------- 386 (580)
Q Consensus 336 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~-----------~~-----~------------- 386 (580)
...+ +|. .+....+.+.......|++.+..... .. .
T Consensus 327 ~~~~---~P~------------~l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (523)
T PRK10965 327 ASGT---LPD------------SLASLPALPSLEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGH 391 (523)
T ss_pred CCCc---CCh------------hhccCCCCCcccccceeEEEEeeccccchhhhhhcccccccccccccccccccccccc
Confidence 0001 110 00000000000001123332221000 00 0
Q ss_pred -------------C-----eEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeE
Q 008038 387 -------------G-----FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 448 (580)
Q Consensus 387 -------------~-----~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
+ ...|+|||+.|. ..++ ..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~-------------------~~~~------------------------~~ 428 (523)
T PRK10965 392 GNMDHMNHGAADAGPAFDFHHANKINGKAFD-------------------MNKP------------------------MF 428 (523)
T ss_pred ccccccccccccccccccccccccCCCeECC-------------------CCCc------------------------ce
Confidence 0 011355555442 1111 16
Q ss_pred EccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe-
Q 008038 449 MLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA- 526 (580)
Q Consensus 449 ~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a- 526 (580)
.++.|++++|+|.|.+. + .|||||||++|+|+++++..- ....+.|||||.|++ +.+.|++++
T Consensus 429 ~~~~G~~e~w~i~N~~~~~------~Hp~HlHg~~F~Vl~~~g~~~--------~~~~~~wkDTv~v~~-~~~~i~~~f~ 493 (523)
T PRK10965 429 AAKKGQYERWVISGVGDMM------LHPFHIHGTQFRILSENGKPP--------AAHRAGWKDTVRVEG-GRSEVLVKFD 493 (523)
T ss_pred ecCCCCEEEEEEEeCCCCC------ccCeEEeCcEEEEEEecCCCC--------CccccccccEEEECC-cEEEEEEEec
Confidence 79999999999999874 5 799999999999999954211 122458999999987 666666555
Q ss_pred ---cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 ---DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 ---dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+++|.||||||||+|||.|||+.|.|
T Consensus 494 ~~~~~~g~~~~HCHiL~Hed~GMM~~~~V 522 (523)
T PRK10965 494 HDAPKEHAYMAHCHLLEHEDTGMMLGFTV 522 (523)
T ss_pred CCCCCCCCEEEEeCchhhhccCccceeEe
Confidence 46789999999999999999999976
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-72 Score=594.60 Aligned_cols=398 Identities=19% Similarity=0.237 Sum_probs=291.3
Q ss_pred EEEEEEEEEEeCCC-CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccC
Q 008038 33 HYKWEVEYMFWSPD-CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111 (580)
Q Consensus 33 ~~~l~~~~~~~~~~-g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i 111 (580)
.++|+++......+ |..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++..+ .+||+ +++|
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~-L~~~ttiHwHGl~~~~~-~~~g~----~~~I 120 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNR-LTEPVSMTVSGLQVPGP-LMGGP----ARMM 120 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeC-CCCCCceeECCccCCCC-CCCCc----cccC
Confidence 37899998888866 467889999999999999999999999999999 78999999999999764 56775 4789
Q ss_pred CCCCeEEEEEEc-CCCcceeeecCc----chhhccccEEEEEEEcCCCCCCCC--CCC-cceEEEEeecccCchHHHHhh
Q 008038 112 NPGETYLYRFKV-DKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPF--HYD-GEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 112 ~pG~~~~y~f~~-~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~p~--~~d-~e~~l~~~d~~~~~~~~~~~~ 183 (580)
.||++|+|+|++ +++||||||||. ..|+.+||+|+|||+++.+...++ .|+ .|++|+++||.++........
T Consensus 121 ~PG~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~ 200 (471)
T PRK10883 121 SPNADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYN 200 (471)
T ss_pred CCCCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccc
Confidence 999999999998 569999999994 459999999999999976543333 344 499999999998764432211
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-eC
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KN 262 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i-~g 262 (580)
....+ ...++.++|||+..+ .+++++| +|||||||+|..+.+.|+| ++
T Consensus 201 ~~~~~---g~~gd~~lvNG~~~p---------------------------~~~v~~~-~~RlRliNas~~~~~~l~l~d~ 249 (471)
T PRK10883 201 EPGSG---GFVGDTLLVNGVQSP---------------------------YVEVSRG-WVRLRLLNASNARRYQLQMSDG 249 (471)
T ss_pred ccccC---CccCCeeEECCccCC---------------------------eEEecCC-EEEEEEEEccCCceEEEEEcCC
Confidence 01111 236789999999877 6888874 8999999999999999999 89
Q ss_pred eeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCC------CceEEEEecCCC
Q 008038 263 HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATP------PALTLLNYHPTS 331 (580)
Q Consensus 263 h~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~------~~~ail~y~~~~ 331 (580)
|+|+|||.||+++ +|..++++.|+|||||||+|++++ ++.+.|++....... ... ....++++....
T Consensus 250 ~~~~vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (471)
T PRK10883 250 RPLHVIAGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTG 327 (471)
T ss_pred CeEEEEEeCCCcccCCcEeCeEEECCCCeEEEEEECCC--CceEEEECCCccccccccccccCCccccccceeEEEEccc
Confidence 9999999997766 899999999999999999999976 556766653211000 000 011223332111
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhc
Q 008038 332 ASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 411 (580)
Q Consensus 332 ~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~ 411 (580)
.......+ .|. .+... ...+....+++.+.... ..|.|||+.|...
T Consensus 328 ~~~~~~~~---~p~------------~l~~~---~~~~~~~~~~~~~~l~~------~~~~INg~~~~~~---------- 373 (471)
T PRK10883 328 LLPLVTDN---LPM------------RLLPD---EIMEGSPIRSREISLGD------DLPGINGALWDMN---------- 373 (471)
T ss_pred cccCCCCc---CCh------------hhcCC---CCCCCCCcceEEEEecC------CcCccCCcccCCC----------
Confidence 00000000 010 00000 01111223333333321 1467999876321
Q ss_pred cCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC
Q 008038 412 GLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG 491 (580)
Q Consensus 412 ~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g 491 (580)
+++ ..++.|++++|+|.|. + .|||||||+.|||+++++.
T Consensus 374 ---------~~~------------------------~~~~~g~~e~W~~~n~--~------~HP~HlHg~~FqVl~~~G~ 412 (471)
T PRK10883 374 ---------RID------------------------VTAQQGTWERWTVRAD--M------PQAFHIEGVMFLIRNVNGA 412 (471)
T ss_pred ---------cce------------------------eecCCCCEEEEEEECC--C------CcCEeECCccEEEEEecCC
Confidence 111 6789999999999885 4 7999999999999999543
Q ss_pred CCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCce----eeEEeeecchhhhcccEEEEeccc
Q 008038 492 KFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPG----AWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 492 ~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG----~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
... ..+..|||||.|+ +.+.|+++++++| .||||||||+|||.|||+.|.+.+
T Consensus 413 ~~~--------~~~~gwkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 413 MPF--------PEDRGWKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred CCC--------ccccCcCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEec
Confidence 211 1224799999996 4699999999887 899999999999999999998854
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-58 Score=494.13 Aligned_cols=403 Identities=30% Similarity=0.429 Sum_probs=291.5
Q ss_pred CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcC
Q 008038 45 PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD 124 (580)
Q Consensus 45 ~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~ 124 (580)
.++.....|.|||++|||+||+++||+|.|+++|+|+ +.+++||||+..+ +.+||++..+|+.+.||++++|.|+..
T Consensus 47 ~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~-~~t~vh~HG~~~p--~~~dG~~~~~~~~~~~~~~~~y~f~~~ 123 (451)
T COG2132 47 APGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLL-VDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGETPTYTFTQD 123 (451)
T ss_pred ecCCCceeEEecccccCceEEEecCCEEEEEEEeCCC-CCceEEEcCcccC--ccccCCCcccccCCCCCCcEEEeecCC
Confidence 5667778999999999999999999999999999954 4499999998776 689999999999999999999999998
Q ss_pred CCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccC
Q 008038 125 KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRG 204 (580)
Q Consensus 125 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~ 204 (580)
++||||||+|...|+.+||+|++||++..+ .+..+|.+.+++..+|................ ....+..+|||+.
T Consensus 124 ~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~--~~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~vnG~~ 198 (451)
T COG2132 124 VPGTYWYHPHTHGQVYDGLAGALIIEDENS--EPLGVDDEPVILQDDWLDEDGTDLYQEGPAMG---GFPGDTLLVNGAI 198 (451)
T ss_pred CCcceEeccCCCchhhcccceeEEEeCCCC--CCCCCCceEEEEEeeeecCCCCccccCCcccc---CCCCCeEEECCCc
Confidence 888999999998899999999999999755 45578888899888988765443322211111 3367889999976
Q ss_pred CCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEE
Q 008038 205 QFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMD 284 (580)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~ 284 (580)
.+ +...++++|||||+|++..+.+.+++.+++|+||++||.+++|..++.+.
T Consensus 199 ~p----------------------------~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~ 250 (451)
T COG2132 199 LP----------------------------FKAVPGGVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELY 250 (451)
T ss_pred cc----------------------------eeecCCCeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEE
Confidence 65 44446677999999999777888888899999999999999989999999
Q ss_pred EcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCC-CCCCCCCCCCCCCCCCccccccccccccC
Q 008038 285 IYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASK-IPLSPPPITPRWDDYDHSKSFSNKIFALM 363 (580)
Q Consensus 285 l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~-~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 363 (580)
|+||||+||++++++ ++.+.+.+.. ...+ ....+........... .........+...... ..+........
T Consensus 251 l~p~er~~v~v~~~~--~~~~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~ 323 (451)
T COG2132 251 LAPGERYEVLVDMND--GGAVTLTALG-EDMP--DTLKGFRAPNPILTPSYPVLNGRVGAPTGDMAD--HAPVGLLVTIL 323 (451)
T ss_pred ecCcceEEEEEEcCC--CCeEEEEecc-ccCC--ceeeeeeccccccccccccccccccCCCcchhh--ccccccchhhc
Confidence 999999999999987 6778887765 1111 1111111111000000 0000000000000000 00000000000
Q ss_pred CCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccC
Q 008038 364 GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL 443 (580)
Q Consensus 364 ~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~ 443 (580)
..+. ..+...+.... ..+...|.+|+..|.. .++
T Consensus 324 --~~~~--~~~~~~~~l~~--~~~~~~~~~n~~~~~~-------------------~~~--------------------- 357 (451)
T COG2132 324 --VEPG--PNRDTDFHLIG--GIGGYVWAINGKAFDD-------------------NRV--------------------- 357 (451)
T ss_pred --CCCc--ccccccchhhc--ccccccccccCccCCC-------------------CcC---------------------
Confidence 0000 01111111111 1123457777765521 111
Q ss_pred CceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEE
Q 008038 444 GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR 523 (580)
Q Consensus 444 ~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~ir 523 (580)
.+.++.|++++|+|.|.+.+ .|||||||+.|+|++.+ .. .....+.||||+.+.+++.++|+
T Consensus 358 ---~~~~~~G~~~~~~i~n~~~~------~HP~HlHg~~F~v~~~~-~~--------~~~~~~~~kDTv~v~~~~~~~v~ 419 (451)
T COG2132 358 ---TLIAKAGTRERWVLTNDTPM------PHPFHLHGHFFQVLSGD-AP--------APGAAPGWKDTVLVAPGERLLVR 419 (451)
T ss_pred ---ceeecCCCEEEEEEECCCCC------ccCeEEcCceEEEEecC-CC--------cccccCccceEEEeCCCeEEEEE
Confidence 27889999999999998878 99999999999999986 11 12235689999999999999999
Q ss_pred EEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 524 FVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 524 f~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
|.+++||.|+||||+++|++.|||..+.+..
T Consensus 420 ~~a~~~g~~~~HCH~l~H~~~Gm~~~~~v~~ 450 (451)
T COG2132 420 FDADYPGPWMFHCHILEHEDNGMMGQFGVVP 450 (451)
T ss_pred EeCCCCCceEEeccchhHhhcCCeeEEEecC
Confidence 9999999999999999999999999997753
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-48 Score=389.08 Aligned_cols=266 Identities=21% Similarity=0.251 Sum_probs=220.1
Q ss_pred cCCceEEEEEEEEEEEeC-CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC-CceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS-PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-EGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~-~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+...+++|+|++++..+. .+|..+.+|+|||++|||+||+++||+|+|+|+|++.. .++++||||. .++||++
T Consensus 23 ~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~-----~~~dg~~ 97 (311)
T TIGR02376 23 SGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAA-----TGALGGA 97 (311)
T ss_pred CCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCC-----CccCCCC
Confidence 677899999999999888 68999999999999999999999999999999999421 5899999996 2579988
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecC----cchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHH
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQ 180 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H----~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~ 180 (580)
.++| |.||++++|+|+++++|||||||| +..|+..||+|+|||++++. .+ .+|+|++|+++||++......
T Consensus 98 ~~~~--I~PG~t~ty~F~~~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~ 172 (311)
T TIGR02376 98 ALTQ--VNPGETATLRFKATRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREG--LP-EYDKEYYIGESDLYTPKDEGE 172 (311)
T ss_pred ccee--ECCCCeEEEEEEcCCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCC--Cc-CcceeEEEeeeeEeccccccc
Confidence 8776 999999999999999999999999 46799999999999998643 22 578999999999999754321
Q ss_pred HhhhcCC-C-CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEE
Q 008038 181 EVGLSSR-P-LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNL 258 (580)
Q Consensus 181 ~~~~~~~-~-~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~ 258 (580)
...+... . +. ...++.++|||+..+.+ +.+++++||++||||||++..+.+.|
T Consensus 173 ~~~~~~~~~~~~-~~~~~~~~iNG~~~~~~------------------------~~~~v~~G~~~RlRiiNa~~~~~~~~ 227 (311)
T TIGR02376 173 GGAYEDDVAAMR-TLTPTHVVFNGAVGALT------------------------GDNALTAGVGERVLFVHSQPNRDSRP 227 (311)
T ss_pred cccccchHHHHh-cCCCCEEEECCccCCCC------------------------CCcccccCCcEEEEEEcCCCCCCCCC
Confidence 1100000 0 01 24678999999975410 14689999999999999998888999
Q ss_pred EEeCeeeEEEEECCcccCcee--eeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 259 AVKNHKMVVVEADGNYVQPFE--VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 259 ~i~gh~~~via~DG~~v~P~~--~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
+++|+.+++|+.||.++.|.. ++++.|+||||+||+|++++ +|.|+++++..... ......|+|+|++.
T Consensus 228 ~~~g~~~~~v~~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~--pG~y~~~~~~~~~~-~~~g~~~~i~~~g~ 298 (311)
T TIGR02376 228 HLIGGHGDYVWVTGKFANPPNRDVETWFIPGGSAAAALYTFEQ--PGVYAYVDHNLIEA-FEKGAAAQVKVEGA 298 (311)
T ss_pred eEecCCceEEEECCcccCCCCCCcceEEECCCceEEEEEEeCC--CeEEEEECcHHHHH-HhCCCEEEEEECCC
Confidence 999999999999999997644 89999999999999999997 79999999865432 13457899999854
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=253.59 Aligned_cols=115 Identities=48% Similarity=0.923 Sum_probs=107.5
Q ss_pred EEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCe
Q 008038 37 EVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGET 116 (580)
Q Consensus 37 ~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~ 116 (580)
.|++..+.++|..+.+|+|||++|||+||+++||+|+|+|+|+ +.++++|||||+++...+|+||+++++||+|.||++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~-l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~ 79 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNN-LDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGES 79 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEE-SSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEec-cccccccccceeeeeeeeecCCcccccceeEEeecc
Confidence 3678889999999999999999999999999999999999999 699999999999998888999999999999999999
Q ss_pred EEEEEEcCC-CcceeeecCcchhhccccEEEEEEEcC
Q 008038 117 YLYRFKVDK-AGTYFYHGHLGMQRSAGLYGSLIVDVA 152 (580)
Q Consensus 117 ~~y~f~~~~-~Gt~wYH~H~~~~~~~Gl~G~liV~~~ 152 (580)
++|+|++.+ +||||||||+..|..+||+|+|||+++
T Consensus 80 ~~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 80 FTYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eeeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 999999966 999999999887878999999999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=224.29 Aligned_cols=109 Identities=41% Similarity=0.797 Sum_probs=97.4
Q ss_pred ccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEE
Q 008038 441 TTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT 520 (580)
Q Consensus 441 ~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v 520 (580)
...+..++.++.|++|+|+|+|.+.. .|||||||++|+|++++.+.++......+++.+|.||||+.|++++++
T Consensus 29 ~~~~~~~~~~~~g~~v~~~l~N~~~~------~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~ 102 (138)
T PF07731_consen 29 FFGNTPVIEVKNGDVVEIVLQNNGSM------PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWV 102 (138)
T ss_dssp SSSTTSEEEEETTSEEEEEEEECTTS------SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEE
T ss_pred cCCCcceEEEeCCCEEEEEEECCCCC------ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEE
Confidence 34566789999999999999998877 999999999999999987766544456788899999999999999999
Q ss_pred EEEEEecCceeeEEeeecchhhhcccEEEEecccc
Q 008038 521 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~ 555 (580)
+|||+++|||.|+|||||++|++.|||++|.|.++
T Consensus 103 ~i~~~~~~~G~w~~HCHi~~H~~~GM~~~~~v~~~ 137 (138)
T PF07731_consen 103 VIRFRADNPGPWLFHCHILEHEDNGMMAVFVVGPQ 137 (138)
T ss_dssp EEEEEETSTEEEEEEESSHHHHHTT-EEEEEECHH
T ss_pred EEEEEeecceEEEEEEchHHHHhCCCeEEEEEcCC
Confidence 99999999999999999999999999999998763
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=210.68 Aligned_cols=152 Identities=35% Similarity=0.673 Sum_probs=123.9
Q ss_pred cceEEEEeecccCchHHHHhhhcCCC---CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEec
Q 008038 163 GEFNLLLSDWWHRSVHEQEVGLSSRP---LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 239 (580)
Q Consensus 163 ~e~~l~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (580)
.|++|+++||+++........+...+ ..++..+++++|||++..+|..+. ......+.+.+++
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~--------------~~~~~~~~~~v~~ 66 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSAD--------------YTGGEPPVIKVKP 66 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTG--------------STTSTSGEEEEET
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCcccccccccc--------------ccccccceEEEcC
Confidence 37899999999988877665444332 223678999999999998765421 1234567999999
Q ss_pred CCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCC---C
Q 008038 240 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK---P 316 (580)
Q Consensus 240 Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~---~ 316 (580)
|++|||||||+|+...+.|+|+||+|+|||+||.+++|+.++++.|++||||||+|++++ ++|+|+|++...... .
T Consensus 67 g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~-~~g~y~i~~~~~~~~~~~~ 145 (159)
T PF00394_consen 67 GERYRLRLINAGASTSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQ-PPGNYWIRASYQHDSINDP 145 (159)
T ss_dssp TTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECS-CSSEEEEEEEESSSSSHSH
T ss_pred CcEEEEEEEeccCCeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCC-CCCeEEEEEecccCCCccC
Confidence 999999999999999999999999999999999999999999999999999999999987 689999999743222 2
Q ss_pred CCCCceEEEEecC
Q 008038 317 ATPPALTLLNYHP 329 (580)
Q Consensus 317 ~~~~~~ail~y~~ 329 (580)
....++|+|+|++
T Consensus 146 ~~~~~~aiL~Y~~ 158 (159)
T PF00394_consen 146 QNGNALAILRYDG 158 (159)
T ss_dssp GGGTTEEEEEETT
T ss_pred CCcEEEEEEEECC
Confidence 4677899999984
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-18 Score=188.14 Aligned_cols=141 Identities=21% Similarity=0.298 Sum_probs=116.6
Q ss_pred cccccchhHHHHHHHHHHHHhhccccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCC--eEEecCCCEEEEEEEeC
Q 008038 2 GLGLRHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGP--TIRARAGDTIAVELTNK 79 (580)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP--~l~v~~Gd~v~v~v~N~ 79 (580)
|+||+...++++.+..|.+...........++++++++. +..+.+|+|||+.+++ .|++++||+|+|+++|.
T Consensus 443 ~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~g------~m~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~ 516 (587)
T TIGR01480 443 GIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLTG------NMERFAWSFDGEAFGLKTPLRFNYGERLRVVLVND 516 (587)
T ss_pred CcccccCCcceeehhhccccccccCcCCCCceEEEEEcC------CCceeEEEECCccCCCCCceEecCCCEEEEEEECC
Confidence 788999888898888888765554456677888888743 2568899999998874 79999999999999999
Q ss_pred CCCCceeeeeccccccCCCCCCCCCC--CccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 80 LYTEGVVIHWHGIRQLGTPWADGTAS--ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 80 l~~~~~siH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
...+|+|||||+.... ...||... -....|.||++++|+|.++++|+||||||...|...||++.+.|.
T Consensus 517 -t~~~HpmHlHG~~f~v-~~~~G~~~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 517 -TMMAHPIHLHGMWSEL-EDGQGEFQVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred -CCCCcceeEcCceeee-ecCCCcccccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 7899999999997643 23356321 123789999999999999999999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.3e-18 Score=151.28 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=81.7
Q ss_pred CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC--CCceeeeeccccccCCCCCCCCCCCccccCCCC----Ce--
Q 008038 45 PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY--TEGVVIHWHGIRQLGTPWADGTASISQCPINPG----ET-- 116 (580)
Q Consensus 45 ~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~--~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG----~~-- 116 (580)
..+....-+.+|| .++|+|++++||+|+|+|+|.+. .-...||+||...+..+.+||++.++|++|.|+ +.
T Consensus 36 ~~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~ 114 (148)
T TIGR03095 36 MPGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGY 114 (148)
T ss_pred CCCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccce
Confidence 4556666778888 46999999999999999999942 223555555554433345899999999999884 11
Q ss_pred EEEEEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.++.|++.++||||||||...|..+||+|.|||+
T Consensus 115 ~~~tf~f~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 115 TDFTYHFSTAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred eEEEEECCCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 3455666799999999999999999999999985
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-15 Score=155.45 Aligned_cols=233 Identities=15% Similarity=0.081 Sum_probs=144.3
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|++++++|.|.... ..+.++++++. +.||... ...|.||+++++.+++++ +|+||+|||.
T Consensus 59 P~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~PG~t~ty~F~~~~--~Gty~YH~H~ 126 (311)
T TIGR02376 59 PLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVNPGETATLRFKATR--PGAFVYHCAP 126 (311)
T ss_pred ceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeECCCCeEEEEEEcCC--CEEEEEEcCC
Confidence 489999999999999998532 46889998863 4577531 234999999999999876 8999999996
Q ss_pred cCC-CCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeE
Q 008038 312 RGR-KPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT 389 (580)
Q Consensus 312 ~~~-~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~ 389 (580)
... ..+ .....+.|.+.+... . |.+ + .++...+....- .........+.............
T Consensus 127 ~~~~~~q~~~Gl~G~liV~~~~~--~--------~~~---d--~e~~l~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 189 (311)
T TIGR02376 127 PGMVPWHVVSGMNGAIMVLPREG--L--------PEY---D--KEYYIGESDLYT--PKDEGEGGAYEDDVAAMRTLTPT 189 (311)
T ss_pred CCchhHHhhcCcceEEEeeccCC--C--------cCc---c--eeEEEeeeeEec--cccccccccccchHHHHhcCCCC
Confidence 431 112 233445555553210 0 000 0 000000000000 00000000000000000000112
Q ss_pred EEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCC
Q 008038 390 KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 469 (580)
Q Consensus 390 ~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~ 469 (580)
.+.|||+.... .+...++.|++++|+|.|.+..
T Consensus 190 ~~~iNG~~~~~--------------------------------------------~~~~~v~~G~~~RlRiiNa~~~--- 222 (311)
T TIGR02376 190 HVVFNGAVGAL--------------------------------------------TGDNALTAGVGERVLFVHSQPN--- 222 (311)
T ss_pred EEEECCccCCC--------------------------------------------CCCcccccCCcEEEEEEcCCCC---
Confidence 34555553210 0014678899999999997653
Q ss_pred CCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC-ccceEEeCCCcEEEEEEEecCceeeEEeeecchhh-hcccE
Q 008038 470 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMG 547 (580)
Q Consensus 470 ~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~-d~GM~ 547 (580)
..+.||++|+.|.++.. +|.+- ..+. ..|++.|.||+...|.++++.||.|++|||...|+ ..||+
T Consensus 223 --~~~~~~~~g~~~~~v~~-DG~~~---------~~~~~~~~~~~i~PG~R~dv~v~~~~pG~y~~~~~~~~~~~~~g~~ 290 (311)
T TIGR02376 223 --RDSRPHLIGGHGDYVWV-TGKFA---------NPPNRDVETWFIPGGSAAAALYTFEQPGVYAYVDHNLIEAFEKGAA 290 (311)
T ss_pred --CCCCCeEecCCceEEEE-CCccc---------CCCCCCcceEEECCCceEEEEEEeCCCeEEEEECcHHHHHHhCCCE
Confidence 16899999999999998 34321 1122 36999999999999999999999999999999998 77999
Q ss_pred EEEecc
Q 008038 548 VVLALG 553 (580)
Q Consensus 548 ~~~~~~ 553 (580)
+++.+.
T Consensus 291 ~~i~~~ 296 (311)
T TIGR02376 291 AQVKVE 296 (311)
T ss_pred EEEEEC
Confidence 999653
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.5e-12 Score=111.42 Aligned_cols=104 Identities=17% Similarity=0.159 Sum_probs=81.0
Q ss_pred HHHhhccccCCceEEEEEEEE--EEEe---CCCCceeEEE-EEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccc
Q 008038 19 LCSVFETSYGSKTRHYKWEVE--YMFW---SPDCKESIVM-GINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI 92 (580)
Q Consensus 19 ~~~~~~~~~~~~~~~~~l~~~--~~~~---~~~g~~~~~~-~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~ 92 (580)
+.+++...+++..++|+++|+ ..++ +..|.....+ ++|+++..+.|+|++||+|+++++|. .+.++.+-+++.
T Consensus 12 ~~~~~~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~-d~~~H~f~i~~~ 90 (135)
T TIGR03096 12 LGLLLMGTAQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENK-SPISEGFSIDAY 90 (135)
T ss_pred HHHhhccchhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeC-CCCccceEECCC
Confidence 345555677888899999999 4444 4677777766 99999999999999999999999999 555442222221
Q ss_pred cccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcc
Q 008038 93 RQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLG 136 (580)
Q Consensus 93 ~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~ 136 (580)
|. +..|+||++.+++|++.++|+|||||-..
T Consensus 91 ---------gi----s~~I~pGet~TitF~adKpG~Y~y~C~~H 121 (135)
T TIGR03096 91 ---------GI----SEVIKAGETKTISFKADKAGAFTIWCQLH 121 (135)
T ss_pred ---------Cc----ceEECCCCeEEEEEECCCCEEEEEeCCCC
Confidence 11 35689999999999999999999999743
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-10 Score=126.13 Aligned_cols=257 Identities=12% Similarity=0.054 Sum_probs=154.8
Q ss_pred EEEEEEEEEEEeCCCC--------------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccC
Q 008038 32 RHYKWEVEYMFWSPDC--------------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLG 96 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~ 96 (580)
.++.|.++......+| .....+++||+. .|.+.++ |.++++|+.|........+.+ .|....-
T Consensus 180 ~d~~lvlqD~~~~~~g~~~~~~~~~~~~~g~~gd~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~v 257 (523)
T PRK10965 180 DDIPVILQDKRFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYV 257 (523)
T ss_pred ceeeEEEEeeeeCCCCceeccccccccccCccCCeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEE
Confidence 3566777655544433 234578999995 7999885 569999999995556667776 4543221
Q ss_pred CCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc------cccEEEEEEEcCC--C-CCCC----
Q 008038 97 TPWADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS------AGLYGSLIVDVAD--G-EKEP---- 158 (580)
Q Consensus 97 ~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~------~Gl~G~liV~~~~--~-~~~p---- 158 (580)
...||.+ .+....|.|||+++..+++.+.|.++...-...+.. ..-+-.+.|.... . ...|
T Consensus 258 -Ia~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~ 336 (523)
T PRK10965 258 -IASDGGLLAEPVKVSELPILMGERFEVLVDTSDGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLA 336 (523)
T ss_pred -EEeCCCcccCccEeCeEEECccceEEEEEEcCCCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhc
Confidence 4678854 234577999999999999877777776653111110 1011223333211 1 0111
Q ss_pred ----CCC-----CcceEEEEeecccC-ch-------H-HHHhhh------cC--CC----CC-----CCC---CCceEEe
Q 008038 159 ----FHY-----DGEFNLLLSDWWHR-SV-------H-EQEVGL------SS--RP----LR-----WIG---EPQTLLI 200 (580)
Q Consensus 159 ----~~~-----d~e~~l~~~d~~~~-~~-------~-~~~~~~------~~--~~----~~-----~~~---~~~~~li 200 (580)
... .+++.+.+..+... .. . .....+ .. .+ +. ... ....++|
T Consensus 337 ~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 416 (523)
T PRK10965 337 SLPALPSLEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKI 416 (523)
T ss_pred cCCCCCcccccceeEEEEeeccccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 000 02223322211100 00 0 000000 00 00 00 000 0112489
Q ss_pred CccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC---c
Q 008038 201 NGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---P 277 (580)
Q Consensus 201 NG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~---P 277 (580)
||+.+.. ..+.++++.|++++|+|+|.+....|.|||||+.|+|++.||.+.. +
T Consensus 417 NG~~~~~-----------------------~~~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~ 473 (523)
T PRK10965 417 NGKAFDM-----------------------NKPMFAAKKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRA 473 (523)
T ss_pred CCeECCC-----------------------CCcceecCCCCEEEEEEEeCCCCCccCeEEeCcEEEEEEecCCCCCcccc
Confidence 9998651 1235789999999999999986557999999999999999999775 3
Q ss_pred eeeeeEEEcCCceEEEEEEeCC--CCCcceEEEEeecCCC
Q 008038 278 FEVDDMDIYSGESYSVLLTTNQ--DPSYNYWISAGVRGRK 315 (580)
Q Consensus 278 ~~~d~v~l~pGeR~dv~v~~~~--~~~g~y~l~~~~~~~~ 315 (580)
...|+|.|.+ ++++++++++. +..|.|.+|||.+...
T Consensus 474 ~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~He 512 (523)
T PRK10965 474 GWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHE 512 (523)
T ss_pred ccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhh
Confidence 4689999977 88999999974 2357999999986643
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.1e-10 Score=122.60 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=160.3
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC----CccccCCCCCeEEEEEEc-C
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS----ISQCPINPGETYLYRFKV-D 124 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~----~~q~~i~pG~~~~y~f~~-~ 124 (580)
...+++||+. .|++++++|+++++|+.|........+|+.|..... .+.||.+- +....|.|||+++..+++ +
T Consensus 191 ~d~~liNG~~-~~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~V-I~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~ 268 (539)
T PLN02835 191 PDGVLINGQT-QSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKL-VEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQ 268 (539)
T ss_pred CceEEEcccc-CceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEE-EEECCccCCCceeeEEEECcCceEEEEEEcCC
Confidence 3578999995 589999999999999999966678899999987643 57899752 345679999999999999 5
Q ss_pred CCcceeeecCcchh-hccccEEEEEEEcCCC---CCCCC-CC-Cc--------ceEEEEeecccCchHH--HHh-hhc-C
Q 008038 125 KAGTYFYHGHLGMQ-RSAGLYGSLIVDVADG---EKEPF-HY-DG--------EFNLLLSDWWHRSVHE--QEV-GLS-S 186 (580)
Q Consensus 125 ~~Gt~wYH~H~~~~-~~~Gl~G~liV~~~~~---~~~p~-~~-d~--------e~~l~~~d~~~~~~~~--~~~-~~~-~ 186 (580)
.+|.||...-.... ......+.|-.+.... .+.|. .. +. .....+......+... ... ... .
T Consensus 269 ~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~ 348 (539)
T PLN02835 269 SPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPT 348 (539)
T ss_pred CCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCC
Confidence 57999998632111 1111233333322211 01111 00 00 0000011100000000 000 000 0
Q ss_pred CC----CCCC--CCCceEEeCccCCCC--ccc-cccccCCCccccc-----ccCC--CCCCceEEEEecCCEEEEEEeec
Q 008038 187 RP----LRWI--GEPQTLLINGRGQFN--CSL-AAHFSNGSAEQCK-----LRGN--EQCAPQILHVQPNKTYRLRIAST 250 (580)
Q Consensus 187 ~~----~~~~--~~~~~~liNG~~~~~--~~~-~~~~~~~~~~~~~-----~~~~--~~~~~~~~~v~~Ge~~rlRliNa 250 (580)
.. .... .....+.|||..+.. .++ ...|.......|. ...+ .-.....+.++.|+.+.|-|-|.
T Consensus 349 ~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~ 428 (539)
T PLN02835 349 KTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNN 428 (539)
T ss_pred ceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECC
Confidence 00 0000 011457889887642 111 0000000000010 0000 00112367888899999999997
Q ss_pred CCceeEEEEEeCeeeEEEEE-CCcc----------cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCC
Q 008038 251 TALASLNLAVKNHKMVVVEA-DGNY----------VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATP 319 (580)
Q Consensus 251 g~~~~~~~~i~gh~~~via~-DG~~----------v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~ 319 (580)
+.. .|.||+|||.|+|++. +|.+ ..|...|++.+.+++..-+-+.+++ +|.|.||||.... ...
T Consensus 429 ~~~-~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDN--PG~Wl~HCHi~~H--~~~ 503 (539)
T PLN02835 429 EKT-MQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDN--QGMWNMRSAIWER--QYL 503 (539)
T ss_pred CCC-CCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECcC--CEEeeeeecchhh--hhc
Confidence 644 7999999999999987 5522 2488999999999999999999998 9999999997442 233
Q ss_pred CceEEEEec
Q 008038 320 PALTLLNYH 328 (580)
Q Consensus 320 ~~~ail~y~ 328 (580)
...+++++.
T Consensus 504 Gm~~~~~V~ 512 (539)
T PLN02835 504 GQQFYLRVW 512 (539)
T ss_pred ccEEEEEEc
Confidence 444555555
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-10 Score=121.16 Aligned_cols=259 Identities=16% Similarity=0.200 Sum_probs=151.1
Q ss_pred EEEEEcCCC-C--------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 51 IVMGINGQF-P--------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 51 ~~~~~NG~~-p--------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
..+++||+. + .++|+|++|+++++|+.|........+|.+|..... .+.||.+ .+....|.|||++
T Consensus 167 d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~V-Ia~DG~~~~P~~~~~l~i~~GqRy 245 (539)
T TIGR03389 167 DAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTV-VEVDATYTKPFKTKTIVIGPGQTT 245 (539)
T ss_pred ceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEE-EEeCCcccCceEeCeEEecCCCEE
Confidence 468999983 1 148999999999999999955666788888877643 5789975 2346789999999
Q ss_pred EEEEEcC-CCcceeeecCcc--hh--hccccEEEEEEEc-CCCCCCCC-C----CCc---ceE----E-EE--eeccc--
Q 008038 118 LYRFKVD-KAGTYFYHGHLG--MQ--RSAGLYGSLIVDV-ADGEKEPF-H----YDG---EFN----L-LL--SDWWH-- 174 (580)
Q Consensus 118 ~y~f~~~-~~Gt~wYH~H~~--~~--~~~Gl~G~liV~~-~~~~~~p~-~----~d~---e~~----l-~~--~d~~~-- 174 (580)
+..++++ .+|.||.+.+.. .+ .......+++... ......|. . ++. ... + .+ ..+..
T Consensus 246 dVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 325 (539)
T TIGR03389 246 NVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLNSAQYPANV 325 (539)
T ss_pred EEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhcccccccCCCCCC
Confidence 9999994 489999998742 11 1111122333332 22211110 0 100 000 0 00 00000
Q ss_pred -CchHH-HHhhhcCCCC---------CCCCCCceEEeCccCCC--Cccc-ccccc-----------CC-CcccccccCC-
Q 008038 175 -RSVHE-QEVGLSSRPL---------RWIGEPQTLLINGRGQF--NCSL-AAHFS-----------NG-SAEQCKLRGN- 227 (580)
Q Consensus 175 -~~~~~-~~~~~~~~~~---------~~~~~~~~~liNG~~~~--~~~~-~~~~~-----------~~-~~~~~~~~~~- 227 (580)
..... ....+. ... ...+....+.|||..+. ..++ ...+. .. ....|. ...
T Consensus 326 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~ 403 (539)
T TIGR03389 326 PVTIDRRLFFTIG-LGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNY-TGTN 403 (539)
T ss_pred CCCCCeEEEEEee-cccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccC-CCCC
Confidence 00000 000000 000 00011124678888642 1111 00000 00 000010 000
Q ss_pred ------CCCCceEEEEecCCEEEEEEeecCC--ceeEEEEEeCeeeEEEEEC-Ccc-----------cCceeeeeEEEcC
Q 008038 228 ------EQCAPQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEAD-GNY-----------VQPFEVDDMDIYS 287 (580)
Q Consensus 228 ------~~~~~~~~~v~~Ge~~rlRliNag~--~~~~~~~i~gh~~~via~D-G~~-----------v~P~~~d~v~l~p 287 (580)
......++.++.|++|.+.|.|.+. ...|.||+|||.|+|++.+ |.+ ..|...|++.+.+
T Consensus 404 ~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~ 483 (539)
T TIGR03389 404 LPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPT 483 (539)
T ss_pred cccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEEcCC
Confidence 0012246889999999999999752 3379999999999999986 321 1377789999999
Q ss_pred CceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 288 GESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 288 GeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
+.-+.+-+++++ +|.|.||||....
T Consensus 484 ~g~vvirf~adN--PG~W~~HCHi~~H 508 (539)
T TIGR03389 484 GGWAAIRFVADN--PGVWFMHCHLEVH 508 (539)
T ss_pred CceEEEEEecCC--CeEEEEEecccch
Confidence 999999999988 9999999997554
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-10 Score=124.65 Aligned_cols=242 Identities=12% Similarity=0.005 Sum_probs=145.8
Q ss_pred EEEEEEEEEEeCCC-----------CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccCCCCC
Q 008038 33 HYKWEVEYMFWSPD-----------CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLGTPWA 100 (580)
Q Consensus 33 ~~~l~~~~~~~~~~-----------g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~~~~~ 100 (580)
++.|.++...+..+ |....++++||+. .|.|.|++| ++++|+.|........+++ .|..... ...
T Consensus 181 d~~l~l~D~~~~~~g~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~v-Ia~ 257 (471)
T PRK10883 181 DFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHV-IAG 257 (471)
T ss_pred ceeEEeeeeeeccCCCccccccccCCccCCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEE-EEe
Confidence 56666665444332 3345678999994 799999876 8999999996667788888 5653321 457
Q ss_pred CCCCC-----CccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEE------------EEEEEcCCCCCCCCCCCc
Q 008038 101 DGTAS-----ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYG------------SLIVDVADGEKEPFHYDG 163 (580)
Q Consensus 101 DG~~~-----~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G------------~liV~~~~~~~~p~~~d~ 163 (580)
||-.. +....|.|||+++...++.+.+.+.+++-........+.+ .+-+....... +. +.
T Consensus 258 DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 334 (471)
T PRK10883 258 DQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP-LV--TD 334 (471)
T ss_pred CCCcccCCcEeCeEEECCCCeEEEEEECCCCceEEEECCCccccccccccccCCccccccceeEEEEcccccc-CC--CC
Confidence 85331 3467889999999999986666777666311110011111 11111110000 00 00
Q ss_pred ceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEE
Q 008038 164 EFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 243 (580)
Q Consensus 164 e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~ 243 (580)
..+..+........ .. .....+......++|||+.+.. ....++++.|+++
T Consensus 335 ~~p~~l~~~~~~~~-~~-----~~~~~~~l~~~~~~INg~~~~~-----------------------~~~~~~~~~g~~e 385 (471)
T PRK10883 335 NLPMRLLPDEIMEG-SP-----IRSREISLGDDLPGINGALWDM-----------------------NRIDVTAQQGTWE 385 (471)
T ss_pred cCChhhcCCCCCCC-CC-----cceEEEEecCCcCccCCcccCC-----------------------CcceeecCCCCEE
Confidence 00000000000000 00 0000000011234699998651 1124679999999
Q ss_pred EEEEeecCCceeEEEEEeCeeeEEEEECCcccCc---eeeeeEEEcCCceEEEEEEeCCCCCc---ceEEEEeecCCC
Q 008038 244 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQDPSY---NYWISAGVRGRK 315 (580)
Q Consensus 244 rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P---~~~d~v~l~pGeR~dv~v~~~~~~~g---~y~l~~~~~~~~ 315 (580)
+|+|.|.. .|.||||+|.|+|++.||....| ...|+|.+. +++.++++++. ..+ .|.+|||.+...
T Consensus 386 ~W~~~n~~---~HP~HlHg~~FqVl~~~G~~~~~~~~gwkDTV~v~--~~v~i~~~f~~-~~~~~~~~m~HCHiLeHe 457 (471)
T PRK10883 386 RWTVRADM---PQAFHIEGVMFLIRNVNGAMPFPEDRGWKDTVWVD--GQVELLVYFGQ-PSWAHFPFLFYSQTLEMA 457 (471)
T ss_pred EEEEECCC---CcCEeECCccEEEEEecCCCCCccccCcCcEEEcC--CeEEEEEEecC-CCCCCCcEEeeccccccc
Confidence 99999863 69999999999999999986543 347999994 57999999986 333 799999987654
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-08 Score=107.99 Aligned_cols=254 Identities=11% Similarity=0.162 Sum_probs=150.9
Q ss_pred EEEEEcCCCC------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEE
Q 008038 51 IVMGINGQFP------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYR 120 (580)
Q Consensus 51 ~~~~~NG~~p------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~ 120 (580)
..++|||+.. .|+|.|++|++.++|+.|........+|+.|..... .+.||++ .+....|.|||+++..
T Consensus 190 d~~liNG~~~~~~~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tV-Ia~DG~~v~p~~~~~l~i~~GqRydVl 268 (552)
T PLN02354 190 DGVLINGKSGKGDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKL-VEMEGSHVLQNDYDSLDVHVGQCFSVL 268 (552)
T ss_pred CeEEEeCCcCCCCCCCceEEEECCCCEEEEEEEecCCCceEEEEECCceEEE-EEeCCcccCCcceeEEEEccCceEEEE
Confidence 4689999842 379999999999999999977778889999987643 5789976 2345779999999999
Q ss_pred EEc-CCCcceeeecCcchhhc-cccEEEEEEEcCCCCC---CCCC-CCcceEE-EEeeccc-------CchH--H-HH--
Q 008038 121 FKV-DKAGTYFYHGHLGMQRS-AGLYGSLIVDVADGEK---EPFH-YDGEFNL-LLSDWWH-------RSVH--E-QE-- 181 (580)
Q Consensus 121 f~~-~~~Gt~wYH~H~~~~~~-~Gl~G~liV~~~~~~~---~p~~-~d~e~~l-~~~d~~~-------~~~~--~-~~-- 181 (580)
+++ +.+|.||.......... ..-.+.|......... .|.. .+..... ...+... .+.. . ..
T Consensus 269 v~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~ 348 (552)
T PLN02354 269 VTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGK 348 (552)
T ss_pred EECCCCCCcEEEEEeccccCCCccEEEEEEECCCCCCCCCCCCCCCcccccchhhhhhhhhcccccccCCCCCCcccccc
Confidence 999 45899999887432111 1123333333221100 1110 0000000 0000000 0000 0 00
Q ss_pred hhhc-----CCCCCCCCCCceEEeCccCCCC--ccc-ccccc---CC--------Cc--ccccccCCCCCCceEEEEecC
Q 008038 182 VGLS-----SRPLRWIGEPQTLLINGRGQFN--CSL-AAHFS---NG--------SA--EQCKLRGNEQCAPQILHVQPN 240 (580)
Q Consensus 182 ~~~~-----~~~~~~~~~~~~~liNG~~~~~--~~~-~~~~~---~~--------~~--~~~~~~~~~~~~~~~~~v~~G 240 (580)
.... ............+.|||..+.. .++ ...|. .+ .. ..|+ .......++.++.|
T Consensus 349 ~~~~~~~~~~~~~~~~~g~~~~~iNn~s~~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~~---~~~~~~~v~~~~~~ 425 (552)
T PLN02354 349 INITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPPAKIT---KIKIQPNVLNITFR 425 (552)
T ss_pred ccccceEEEecccccCCceEEEEECCccCCCCCCChHHhhhhcccCCccccCccccCCccccC---ccccCCeeEEcCCC
Confidence 0000 0000000011356788877541 111 00010 00 00 0011 00112236788889
Q ss_pred CEEEEEEeecCCceeEEEEEeCeeeEEEEECC-----------cccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 241 KTYRLRIASTTALASLNLAVKNHKMVVVEADG-----------NYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 241 e~~rlRliNag~~~~~~~~i~gh~~~via~DG-----------~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
+.|.+=|.|... ..|.||+|||.|+|++.-- +...|...|++.+.++.=.-+-+++++ +|-|.|||
T Consensus 426 ~~VeiVi~n~~~-~~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aDN--PGvW~~HC 502 (552)
T PLN02354 426 TFVEIIFENHEK-SMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFDN--AGMWNIRS 502 (552)
T ss_pred CEEEEEEeCCCC-CCCCCcCCCccEEEEeecCCCCCccccccCCcCCCCccceEEeCCCCeEEEEEEecC--CeEEeeec
Confidence 999999999753 3799999999999997642 123588899999999999899999988 89999999
Q ss_pred ee
Q 008038 310 GV 311 (580)
Q Consensus 310 ~~ 311 (580)
|.
T Consensus 503 Hi 504 (552)
T PLN02354 503 EN 504 (552)
T ss_pred cc
Confidence 97
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-09 Score=113.09 Aligned_cols=248 Identities=13% Similarity=0.147 Sum_probs=142.5
Q ss_pred eEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcCC-C-cceeeecCcc
Q 008038 63 TIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVDK-A-GTYFYHGHLG 136 (580)
Q Consensus 63 ~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~~-~-Gt~wYH~H~~ 136 (580)
+|.|++|+++++|+.|........+++.|..... ...||.+ .+....|.|||+++..+++++ + |.||.+.-..
T Consensus 204 ~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~V-Ia~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~ 282 (541)
T TIGR03388 204 ILHVEPGKTYRLRIASTTALAALNFAIEGHKLTV-VEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVR 282 (541)
T ss_pred EEEECCCCEEEEEEEcccccceEEEEECCCEEEE-EEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecc
Confidence 5899999999999999966778888888877643 5778865 234567999999999999954 3 5899987533
Q ss_pred hhhc-cccEEEEEEEcCCCCCC-C-------CCCC-cc----eEE-EEeec-ccCchHHHHhh--hcCCCCCCCCCCceE
Q 008038 137 MQRS-AGLYGSLIVDVADGEKE-P-------FHYD-GE----FNL-LLSDW-WHRSVHEQEVG--LSSRPLRWIGEPQTL 198 (580)
Q Consensus 137 ~~~~-~Gl~G~liV~~~~~~~~-p-------~~~d-~e----~~l-~~~d~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 198 (580)
.+.. .....+++.+....... | ..++ .+ ..+ .+... ........... +...... ......+
T Consensus 283 ~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 361 (541)
T TIGR03388 283 GRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKPPETSDRRIVLLNTQNK-INGYTKW 361 (541)
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCCccccchhhccchhhhccccCCCCCCCCCcEEEEeccCcc-cCceEEE
Confidence 2211 11122444443221110 1 0011 00 000 00000 00000000000 0000000 0012347
Q ss_pred EeCccCCC--Cccc-c-cc------ccCC---Cccccccc-------CCCCCCceEEEEecCCEEEEEEeecCC-----c
Q 008038 199 LINGRGQF--NCSL-A-AH------FSNG---SAEQCKLR-------GNEQCAPQILHVQPNKTYRLRIASTTA-----L 253 (580)
Q Consensus 199 liNG~~~~--~~~~-~-~~------~~~~---~~~~~~~~-------~~~~~~~~~~~v~~Ge~~rlRliNag~-----~ 253 (580)
.+||..+. ..++ . .. +... ....|++. ........++.++.|++|.+.|.|... .
T Consensus 362 ~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~ 441 (541)
T TIGR03388 362 AINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNS 441 (541)
T ss_pred EECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCC
Confidence 78888763 1110 0 00 0000 00011110 000011236889999999999999642 3
Q ss_pred eeEEEEEeCeeeEEEEEC-Ccc-----------cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 254 ASLNLAVKNHKMVVVEAD-GNY-----------VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 254 ~~~~~~i~gh~~~via~D-G~~-----------v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
..|.||+|||+|+|++.. |.+ ..|...|++.+.++.-+-+-+++++ +|.|.+|||....
T Consensus 442 ~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adN--PG~W~~HCHi~~H 512 (541)
T TIGR03388 442 ETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADN--PGVWAFHCHIEPH 512 (541)
T ss_pred CCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECCC--CeEeeeeccchhh
Confidence 469999999999999987 432 1377889999999999989999988 9999999997554
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.03 E-value=6e-08 Score=105.39 Aligned_cols=257 Identities=11% Similarity=0.080 Sum_probs=149.0
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc-C
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV-D 124 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~-~ 124 (580)
...+++||+...++++|++|+++++|+.|........+++.|..... ...||.+ .+....|.|||+++...++ +
T Consensus 190 ~d~~liNG~~~~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tV-Ia~DG~~~~p~~~~~l~i~~GQRydvlv~a~~ 268 (543)
T PLN02991 190 PDGILINGRGSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKL-VEVEGTHTIQTPFSSLDVHVGQSYSVLITADQ 268 (543)
T ss_pred CCEEEEccCCCCceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEE-EEeCCccccceeeeEEEEcCCcEEEEEEECCC
Confidence 45789999966689999999999999999965566788888877643 5679965 2356789999999999999 5
Q ss_pred CCcceeeecCcc--hhhccccEEEEEEEcCCCC---CCCCC-CCcceEEE---EeecccCch------HH--------HH
Q 008038 125 KAGTYFYHGHLG--MQRSAGLYGSLIVDVADGE---KEPFH-YDGEFNLL---LSDWWHRSV------HE--------QE 181 (580)
Q Consensus 125 ~~Gt~wYH~H~~--~~~~~Gl~G~liV~~~~~~---~~p~~-~d~e~~l~---~~d~~~~~~------~~--------~~ 181 (580)
..|.||.-.... .+...+ .+.|-.+..... +.|.. .+.+...- ..++..... .. +.
T Consensus 269 ~~~~y~i~~~~~~~~~~~~~-~AIl~Y~g~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~ 347 (543)
T PLN02991 269 PAKDYYIVVSSRFTSKILIT-TGVLHYSNSAGPVSGPIPDGPIQLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINIT 347 (543)
T ss_pred CCCcEEEEEeeccCCCCcce-EEEEEeCCCCCCCCCCCCCCCccccccccchhhhhhcccCCCCCCCCCccccccccccc
Confidence 578899775521 111121 333333222110 11110 01101000 000000000 00 00
Q ss_pred hhhc-CCCCCCCCCCceEEeCccCCCC--ccc-cccccC-CC------cccccccCCCCCCceEEEEecCCEEEEEEeec
Q 008038 182 VGLS-SRPLRWIGEPQTLLINGRGQFN--CSL-AAHFSN-GS------AEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 250 (580)
Q Consensus 182 ~~~~-~~~~~~~~~~~~~liNG~~~~~--~~~-~~~~~~-~~------~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNa 250 (580)
.... ............+.|||..+.. .++ ...|.. .+ .+.-...........++.++.++.|.+=|-|.
T Consensus 348 ~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~ 427 (543)
T PLN02991 348 RTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENW 427 (543)
T ss_pred eeEEEeecccccCceEEEEECCCccCCCCCChhhhhhhcccCccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCC
Confidence 0000 0000000011356788876541 111 011100 00 00000000000112356788899999988886
Q ss_pred CCceeEEEEEeCeeeEEEEECC-c----------ccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 251 TALASLNLAVKNHKMVVVEADG-N----------YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 251 g~~~~~~~~i~gh~~~via~DG-~----------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
... .|.||+|||.|.|++... . ...|...|++.+.++.=.-+-+.+++ +|.|.+|||.
T Consensus 428 ~~~-~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDN--PG~W~~HCHi 496 (543)
T PLN02991 428 EDI-VQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDN--VGMWNLRSEL 496 (543)
T ss_pred CCC-CCCeeeCCcceEEEEeCCCCCCcccccccCCCCCCcccEEEECCCCEEEEEEECCC--CEEeeeeeCc
Confidence 543 799999999999998642 1 23588899999999999999999988 9999999997
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.1e-09 Score=110.86 Aligned_cols=238 Identities=16% Similarity=0.068 Sum_probs=150.2
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEE
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRF 121 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f 121 (580)
.+.......+||+. -|.+.+..| .+++|+.|........+++.|..... ...||.+ .+.+..+.|||+++...
T Consensus 185 ~~~~g~~~~vnG~~-~p~~~~~~g-~~rlRl~n~~~~~~~~~~~~~~~~~V-i~~DG~~v~~~~~d~~~l~p~er~~v~v 261 (451)
T COG2132 185 GGFPGDTLLVNGAI-LPFKAVPGG-VVRLRLLNAGNARTYHLALGGGPLTV-IAVDGGPLPPVSVDELYLAPGERYEVLV 261 (451)
T ss_pred cCCCCCeEEECCCc-cceeecCCC-eEEEEEEecCCceEEEEEecCceEEE-EEeCCcCcCceeeeeEEecCcceEEEEE
Confidence 34556677888853 455555555 59999999933666777777655542 4568866 46678999999999999
Q ss_pred EcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeec-ccCchHHHHhhhcCCC--------CCCC
Q 008038 122 KVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDW-WHRSVHEQEVGLSSRP--------LRWI 192 (580)
Q Consensus 122 ~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~-~~~~~~~~~~~~~~~~--------~~~~ 192 (580)
+....|++-+.|.. .+..+-+.+..-......... ..++........|- ...............+ ..+.
T Consensus 262 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (451)
T COG2132 262 DMNDGGAVTLTALG-EDMPDTLKGFRAPNPILTPSY-PVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLIGG 339 (451)
T ss_pred EcCCCCeEEEEecc-ccCCceeeeeecccccccccc-ccccccccCCCcchhhccccccchhhcCCCcccccccchhhcc
Confidence 99778999999886 222222222222211110000 01111111111110 0000000000000000 0001
Q ss_pred CCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECC
Q 008038 193 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG 272 (580)
Q Consensus 193 ~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG 272 (580)
.....+.+||+.+.+ ....+.++.|++++|+|.|-+. ..|.||+||+.|.|++.|
T Consensus 340 ~~~~~~~~n~~~~~~-----------------------~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~- 394 (451)
T COG2132 340 IGGYVWAINGKAFDD-----------------------NRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD- 394 (451)
T ss_pred cccccccccCccCCC-----------------------CcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC-
Confidence 233557788877651 1336889999999999999987 689999999999999999
Q ss_pred ccc---CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCC
Q 008038 273 NYV---QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 315 (580)
Q Consensus 273 ~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~ 315 (580)
... .+...|++.+.+++++.+.++++. +|.|.+|||.....
T Consensus 395 ~~~~~~~~~~kDTv~v~~~~~~~v~~~a~~--~g~~~~HCH~l~H~ 438 (451)
T COG2132 395 APAPGAAPGWKDTVLVAPGERLLVRFDADY--PGPWMFHCHILEHE 438 (451)
T ss_pred CCcccccCccceEEEeCCCeEEEEEEeCCC--CCceEEeccchhHh
Confidence 322 356789999999999999999987 67999999976543
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.9e-08 Score=110.07 Aligned_cols=233 Identities=10% Similarity=0.074 Sum_probs=134.6
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEE-EEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|+++.|+++++++.|.-......+|.||..+.- -..||.+. +..-.|.||+.++..++++..++|+||+|+|.
T Consensus 39 P~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~----vTQcpI~PG~sf~Y~f~~~~~q~GT~WYHsH~ 114 (538)
T TIGR03390 39 PEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPL----ASQWPIPPGHFFDYEIKPEPGDAGSYFYHSHV 114 (538)
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcc----cccCCCCCCCcEEEEEEecCCCCeeeEEecCC
Confidence 58999999999999999755456778888875433 24799863 22335899999999999864458999999996
Q ss_pred cCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEE
Q 008038 312 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
... ....+|.|.+.+.... + . .++ .+....+.... ..........+. .............
T Consensus 115 ~~Q---~~~l~G~lIV~~~~~~-------~-~-~~d-----~e~~l~l~Dw~--~~~~~~~~~~~~-~~~~~~~~~~d~~ 174 (538)
T TIGR03390 115 GFQ---AVTAFGPLIVEDCEPP-------P-Y-KYD-----DERILLVSDFF--SATDEEIEQGLL-STPFTWSGETEAV 174 (538)
T ss_pred chh---hhcceeEEEEccCCcc-------C-C-Ccc-----CcEEEEEeCCC--CCCHHHHHhhhh-ccCCccCCCCceE
Confidence 332 2224555555421100 0 0 010 00000010000 000000000000 0000000011234
Q ss_pred EEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCC
Q 008038 392 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 471 (580)
Q Consensus 392 ~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~ 471 (580)
.|||+........ ..++ ...| ....+.++.|++++|+|+|.+..
T Consensus 175 liNG~~~~~~~~~-------~~~~-----------------------~~~~-~~~~~~v~~G~~yRlRlINa~~~----- 218 (538)
T TIGR03390 175 LLNGKSGNKSFYA-------QINP-----------------------SGSC-MLPVIDVEPGKTYRLRFIGATAL----- 218 (538)
T ss_pred EECCccccccccc-------cccC-----------------------CCCC-cceEEEECCCCEEEEEEEccCCc-----
Confidence 5666521100000 0000 0000 12358899999999999998764
Q ss_pred CCCCeeecCCC-eEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCc--------eeeEEee
Q 008038 472 EIHPWHLHGHD-FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP--------GAWAFHC 536 (580)
Q Consensus 472 ~~HP~HlHG~~-F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp--------G~w~~HC 536 (580)
...-|+|.||+ |+|++..+. +..|...|++.|.+|++.-|.++++++ |.|.+.-
T Consensus 219 ~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~ 281 (538)
T TIGR03390 219 SLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQF 281 (538)
T ss_pred eEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEE
Confidence 16889999999 999997332 235778899999999999999999863 6766554
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-08 Score=108.47 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=126.0
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEE-EECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|++++|+++++++.|-.. ....+|.||..+.-- ..||.+. .+-.|.||+.+...+++++ +.|+||.|+|.
T Consensus 47 P~I~~~~GD~v~V~v~N~L~-~~ttiHWHGl~q~~~~~~DGv~~-----tqcPI~PG~sftY~F~~~~-q~GT~WYHsH~ 119 (536)
T PLN02792 47 PEIRSLTNDNLVINVHNDLD-EPFLLSWNGVHMRKNSYQDGVYG-----TTCPIPPGKNYTYDFQVKD-QVGSYFYFPSL 119 (536)
T ss_pred CcEEEECCCEEEEEEEeCCC-CCcCEeCCCcccCCCCccCCCCC-----CcCccCCCCcEEEEEEeCC-CccceEEecCc
Confidence 58999999999999999865 355666666544332 3799642 2357999999999999863 48999999996
Q ss_pred cCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEE
Q 008038 312 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
.......+.+..+| +.... .. .| .+.+.. +....+.+..- ........ .+.............
T Consensus 120 ~~q~~~Gl~G~liI-~~~~~-~~-----~p-~~~~d~-----e~~i~l~Dw~~--~~~~~~~~--~~~~g~~~~~~~d~~ 182 (536)
T PLN02792 120 AVQKAAGGYGSLRI-YSLPR-IP-----VP-FPEPAG-----DFTFLIGDWYR--RNHTTLKK--ILDGGRKLPLMPDGV 182 (536)
T ss_pred chhhhcccccceEE-eCCcc-cC-----cC-CCcccc-----eeEEEeccccc--CCHHHHHH--HhhccCcCCCCCCEE
Confidence 43221122222222 22110 00 00 000000 00000000000 00000000 000000000000123
Q ss_pred EEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCC
Q 008038 392 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 471 (580)
Q Consensus 392 ~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~ 471 (580)
.|||+... ....+.++.|++++|+|+|.+..
T Consensus 183 liNG~~~~--------------------------------------------~~~~~~v~~Gk~yRlRliNa~~~----- 213 (536)
T PLN02792 183 MINGQGVS--------------------------------------------YVYSITVDKGKTYRFRISNVGLQ----- 213 (536)
T ss_pred EEeccCCC--------------------------------------------CcceEEECCCCEEEEEEEEcCCC-----
Confidence 34443100 01248899999999999998765
Q ss_pred CCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecC-ceeeEEee
Q 008038 472 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHC 536 (580)
Q Consensus 472 ~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn-pG~w~~HC 536 (580)
...-|+|.||+|.|++.. |.+ ..|...|++.|.+|+++-|.++++. +|.|.+.-
T Consensus 214 ~~~~f~i~gH~~tVI~~D-G~~----------v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~a 268 (536)
T PLN02792 214 TSLNFEILGHQLKLIEVE-GTH----------TVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVV 268 (536)
T ss_pred ceEEEEECCcEEEEEEeC-Ccc----------CCCcceeEEEEccCceEEEEEEcCCCCceEEEEE
Confidence 268999999999999973 322 2355679999999999999999975 57776653
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.7e-08 Score=107.19 Aligned_cols=255 Identities=15% Similarity=0.128 Sum_probs=149.1
Q ss_pred EEEEEcCCCC-CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcC-
Q 008038 51 IVMGINGQFP-GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVD- 124 (580)
Q Consensus 51 ~~~~~NG~~p-gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~- 124 (580)
..+++||+.+ .|+|.+++|+++++|+.|........+++.|..+.. ...||.+ .+.+..|.|||+++..+++.
T Consensus 189 d~~liNG~~~~~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tV-Ia~DG~~v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 189 DGILFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLL-VETEGTYVQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred CEEEEeccCCCcceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEE-EEECCeECCCceeeEEEEcCCceEEEEEEcCC
Confidence 4689999853 589999999999999999965667888888877643 4678864 23567899999999999994
Q ss_pred CC-c---ceeeecCcc--hhhccccEEEEEEEcCCCCC--CCCC----C-Cc----ceEEEEe-ecc---cCchHH--HH
Q 008038 125 KA-G---TYFYHGHLG--MQRSAGLYGSLIVDVADGEK--EPFH----Y-DG----EFNLLLS-DWW---HRSVHE--QE 181 (580)
Q Consensus 125 ~~-G---t~wYH~H~~--~~~~~Gl~G~liV~~~~~~~--~p~~----~-d~----e~~l~~~-d~~---~~~~~~--~~ 181 (580)
++ | .||...-.. .+...+ . +++..+..... .|.. + +. +....+. ... ...... ..
T Consensus 268 ~~~g~~~~Y~i~a~~~~~~~~~~~-~-ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 345 (545)
T PLN02168 268 DPVGIYRSYYIVATARFTDAYLGG-V-ALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYH 345 (545)
T ss_pred CCCCCcceEEEEEEecccCCCcce-E-EEEEECCCCCCCCCCCCCCCcccccccccchhhhhhhcCCCCCCCCCCccccc
Confidence 43 4 799887632 222222 2 44444322111 1111 0 10 1100000 000 000000 00
Q ss_pred hhhcCCCCCC--C------CCCceEEeCccCCCC--ccc-ccc-ccCCCcc-cccccCCC-----CCCceEEEEecCCEE
Q 008038 182 VGLSSRPLRW--I------GEPQTLLINGRGQFN--CSL-AAH-FSNGSAE-QCKLRGNE-----QCAPQILHVQPNKTY 243 (580)
Q Consensus 182 ~~~~~~~~~~--~------~~~~~~liNG~~~~~--~~~-~~~-~~~~~~~-~~~~~~~~-----~~~~~~~~v~~Ge~~ 243 (580)
.........+ . .....+.|||..+.. .++ ... |...+.. .-++.... ......+.++.|+.|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~~~V 425 (545)
T PLN02168 346 YGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFY 425 (545)
T ss_pred ccccccceeEEecccccccCceEEEEECCCccCCCCCchhhhhhcccccccccCCCccCCCcCccccCceEEEecCCCEE
Confidence 0000000000 0 001357788887541 111 000 1000000 00000000 001235788899999
Q ss_pred EEEEeecCCceeEEEEEeCeeeEEEEE-----CC------cccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 244 RLRIASTTALASLNLAVKNHKMVVVEA-----DG------NYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 244 rlRliNag~~~~~~~~i~gh~~~via~-----DG------~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
.+=|-|... ..|.||+|||.|+|++. |+ +...|...|++.+.++.=+-+-+++++ +|.|.||||.
T Consensus 426 eiViqn~~~-~~HP~HLHGh~F~Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDN--PG~Wl~HCHi 501 (545)
T PLN02168 426 HIVFQNPLF-SLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDN--QGMWNVRSQK 501 (545)
T ss_pred EEEEeCCCC-CCCCeeeCCCceEEEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEEEEEccC--CeEEeeeecC
Confidence 998888754 47999999999999976 21 224688899999999999999999988 9999999995
|
|
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-09 Score=98.51 Aligned_cols=90 Identities=22% Similarity=0.409 Sum_probs=73.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC-------------CC-CccccCCCCCeEEEEEEcCCC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT-------------AS-ISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~-------------~~-~~q~~i~pG~~~~y~f~~~~~ 126 (580)
.+.+.++.|+.+++++.|. ...++++|+||.........++. +. ..-..|.||+..+.+|+++.+
T Consensus 33 ~~~~~~~~g~~v~~~l~N~-~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~~~ 111 (138)
T PF07731_consen 33 TPVIEVKNGDVVEIVLQNN-GSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRADNP 111 (138)
T ss_dssp TSEEEEETTSEEEEEEEEC-TTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEETST
T ss_pred cceEEEeCCCEEEEEEECC-CCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEeecc
Confidence 3899999999999999998 78899999999876321111111 11 123578899999999999999
Q ss_pred cceeeecCcchhhccccEEEEEEEc
Q 008038 127 GTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 127 Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
|.|.||||...+...||.+.+.|.+
T Consensus 112 G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 112 GPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp EEEEEEESSHHHHHTT-EEEEEECH
T ss_pred eEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999976
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.8e-08 Score=109.43 Aligned_cols=244 Identities=13% Similarity=0.119 Sum_probs=133.3
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEE-EEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++++++.|++++++|.|......+.+|.||+...- ...||.+ .+....|.||+++++.+++++ +|+||+|+|.
T Consensus 55 P~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pg~s~~y~f~~~~--~Gt~wyH~H~ 128 (566)
T PLN02604 55 PTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTE----GVTQCPILPGETFTYEFVVDR--PGTYLYHAHY 128 (566)
T ss_pred CcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCccccCCC----ccccCccCCCCeEEEEEEcCC--CEEEEEeeCc
Confidence 47999999999999999865557889999985422 1258853 234568999999999999976 9999999996
Q ss_pred cCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEE
Q 008038 312 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
.... .....+.|.+.+...... |. .+ +.+. ...+..-. ..........+. .............
T Consensus 129 ~~q~--~~Gl~G~liV~~~~~~~~-----p~--~~-d~d~----~l~l~Dw~--~~~~~~~~~~~~-~~~~~~~~~~d~~ 191 (566)
T PLN02604 129 GMQR--EAGLYGSIRVSLPRGKSE-----PF--SY-DYDR----SIILTDWY--HKSTYEQALGLS-SIPFDWVGEPQSL 191 (566)
T ss_pred HHHH--hCCCeEEEEEEecCCCCC-----cc--cc-Ccce----EEEeeccc--cCCHHHHHHhhc-cCCCccCCCCCce
Confidence 4321 223344444442211000 00 00 0000 00000000 000000000000 0000000001122
Q ss_pred EEccee-ccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCC
Q 008038 392 AINNVS-LTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 470 (580)
Q Consensus 392 ~iNg~~-~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~ 470 (580)
.|||+- +.... ...+... + ....+.+.......+.++.|++++|+|+|.+..
T Consensus 192 liNG~G~~~~~~-----------------~~~~~~~--~----~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~---- 244 (566)
T PLN02604 192 LIQGKGRYNCSL-----------------VSSPYLK--A----GVCNATNPECSPYVLTVVPGKTYRLRISSLTAL---- 244 (566)
T ss_pred EEcCCCCCCCcc-----------------ccCcccc--c----cccccCCCCCCceEEEecCCCEEEEEEEecccc----
Confidence 344431 10000 0000000 0 000000000112257899999999999998754
Q ss_pred CCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecC-ce-eeEEeeec
Q 008038 471 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG-AWAFHCHI 538 (580)
Q Consensus 471 ~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn-pG-~w~~HCHi 538 (580)
...-|+|-||+|+|++..+ . +..|..-|.+.|.+|+++-|.++++. +| .|-++...
T Consensus 245 -~~~~~sidgH~~~VIa~DG-~----------~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~ 302 (566)
T PLN02604 245 -SALSFQIEGHNMTVVEADG-H----------YVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSV 302 (566)
T ss_pred -ceEEEEECCCEEEEEEeCC-E----------ecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEec
Confidence 2788999999999999733 2 23477889999999999999999975 55 56666543
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.89 E-value=6e-08 Score=106.69 Aligned_cols=244 Identities=14% Similarity=0.154 Sum_probs=130.8
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEE-EEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|+++.|+++++++.|.-......+|.||....- -..||.+ .+..-.|.||+.+.+.+++++ .|+||+|+|.
T Consensus 54 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~----gvtq~pI~PG~s~~Y~f~~~~--~GT~wYHsH~ 127 (574)
T PLN02191 54 PTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAA----GVTQCAINPGETFTYKFTVEK--PGTHFYHGHY 127 (574)
T ss_pred CeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCC----ccccCCcCCCCeEEEEEECCC--CeEEEEeeCc
Confidence 58999999999999999865456788888875432 2368874 223356999999999999976 8999999996
Q ss_pred cCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-ecCCeEE
Q 008038 312 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-TINGFTK 390 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~-~~~~~~~ 390 (580)
.... .....|.|.+.+... +.. +. .++ .+....+..-+- ...+ .....+..... .......
T Consensus 128 ~~q~--~~Gl~G~liV~~~~~---~~~--~~--~~d-----~e~~l~l~Dw~~-~~~~---~~~~~~~~~~~~~~~~~d~ 189 (574)
T PLN02191 128 GMQR--SAGLYGSLIVDVAKG---PKE--RL--RYD-----GEFNLLLSDWWH-ESIP---SQELGLSSKPMRWIGEAQS 189 (574)
T ss_pred HHHH--hCCCEEEEEEccCCC---CCC--CC--CCC-----eeEEEeeecccc-CChH---HHHHhhccCCCCcCCCCCc
Confidence 3322 222334444432111 000 00 000 000000000000 0000 00000000000 0000112
Q ss_pred EEEccee-ccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCC
Q 008038 391 WAINNVS-LTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 469 (580)
Q Consensus 391 ~~iNg~~-~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~ 469 (580)
..|||+. +........ ..+ ..+. .+ .+. .+......++.++.|++++|+|+|.+..
T Consensus 190 ~liNG~g~~~~~~~~~~------~~~-----~~~~-~~-~~~-------~n~~~~p~~~~v~~G~~yRlRiINa~~~--- 246 (574)
T PLN02191 190 ILINGRGQFNCSLAAQF------SNG-----TELP-MC-TFK-------EGDQCAPQTLRVEPNKTYRIRLASTTAL--- 246 (574)
T ss_pred eEECCCCCCCCcccccc------cCC-----cccc-cc-eec-------cCCCCCceEEEEcCCCEEEEEEEecCCc---
Confidence 3455431 100000000 000 0000 00 000 0000111258899999999999998754
Q ss_pred CCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecC-ce-eeEEee
Q 008038 470 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG-AWAFHC 536 (580)
Q Consensus 470 ~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn-pG-~w~~HC 536 (580)
..+-|+|.||+|.|++.. |. +..|...|.+.|.+|++.-|.++++. +| .|-++-
T Consensus 247 --~~~~~~idgH~~tVIa~D-G~----------~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira 302 (574)
T PLN02191 247 --ASLNLAVQGHKLVVVEAD-GN----------YITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISV 302 (574)
T ss_pred --eeEEEEECCCeEEEEEcC-Ce----------eccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEE
Confidence 278899999999999973 32 23577889999999999999999985 44 444443
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=5e-07 Score=98.97 Aligned_cols=228 Identities=11% Similarity=0.087 Sum_probs=128.4
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEE-EECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|+++.|+++++++.|-.. ....+|.||..+... ..||.+ . ..-.|.||++++..+++++ +.|+||.|+|.
T Consensus 60 PtI~~~~GD~v~V~V~N~L~-~~ttIHWHGl~q~~t~w~DGv~---~--TQcPI~PG~sftY~F~~~d-q~GT~WYHsH~ 132 (596)
T PLN00044 60 PALNVTTNWNLVVNVRNALD-EPLLLTWHGVQQRKSAWQDGVG---G--TNCAIPAGWNWTYQFQVKD-QVGSFFYAPST 132 (596)
T ss_pred CcEEEECCCEEEEEEEeCCC-CCccEEECCccCCCCccccCCC---C--CcCCcCCCCcEEEEEEeCC-CCceeEeeccc
Confidence 58999999999999999875 467888888665443 479973 2 3468999999999999963 48999999986
Q ss_pred cCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEE
Q 008038 312 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 391 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~ 391 (580)
.... ....+|-|.+.+..... .| .+...+. +....+.+-. ........+. +... .........
T Consensus 133 ~~Q~--~~Gl~GalII~~~~~~~-----~P-~~~~~~~----e~~i~l~DW~--~~~~~~~~~~--l~~g-~~~~~~d~~ 195 (596)
T PLN00044 133 ALHR--AAGGYGAITINNRDVIP-----IP-FGFPDGG----DITLFIADWY--ARDHRALRRA--LDAG-DLLGAPDGV 195 (596)
T ss_pred hhhh--hCcCeeEEEEcCccccc-----cc-ccCCccc----ceEEEecccc--cCCHHHHHHH--HhcC-CCCCCCCce
Confidence 4322 12233333333211100 00 0000000 0000000000 0000000000 0000 000000011
Q ss_pred EEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCC
Q 008038 392 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 471 (580)
Q Consensus 392 ~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~ 471 (580)
.|||+.- +. + +... ........++.++.|++++|+|+|.+..
T Consensus 196 lING~g~------------------~~-----------~---n~~~-~~~~~~~~~i~V~~Gk~yRlRiINaa~~----- 237 (596)
T PLN00044 196 LINAFGP------------------YQ-----------Y---NDSL-VPPGITYERINVDPGKTYRFRVHNVGVA----- 237 (596)
T ss_pred EEcccCc------------------cc-----------c---CCcc-ccCCCccceEEECCCCEEEEEEEEccCC-----
Confidence 2333210 00 0 0000 0000011258899999999999997754
Q ss_pred CCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCc-e--eeE
Q 008038 472 EIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-G--AWA 533 (580)
Q Consensus 472 ~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp-G--~w~ 533 (580)
...-|+|-||+|.|++.. |.+ ..|...|.+.|.+|++.-+.++++.+ | .||
T Consensus 238 ~~~~fsIdgH~mtVIa~D-G~~----------v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i 291 (596)
T PLN00044 238 TSLNFRIQGHNLLLVEAE-GSY----------TSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYV 291 (596)
T ss_pred ceEEEEECCCEEEEEEeC-Ccc----------cCceeeeeEEEcCCceEEEEEECCCCCCCceEE
Confidence 268899999999999973 433 35778899999999999999999864 5 466
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-08 Score=86.49 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=67.6
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++.++.|+.|++.+.|.... .+.+|+||...---...+|. . .. -...|.||+..+.+|++
T Consensus 27 tI~v~~Gd~v~i~~~N~l~~------~~siH~HG~~~~~~~~~DG~-------~------~~-~~~~i~pG~~~~Y~~~~ 86 (117)
T PF07732_consen 27 TIRVREGDTVRITVTNNLDE------PTSIHWHGLHQPPSPWMDGV-------P------GV-TQCPIAPGESFTYEFTA 86 (117)
T ss_dssp EEEEETTEEEEEEEEEESSS------GBSEEEETSBSTTGGGGSGG-------T------TT-SGSSBSTTEEEEEEEEE
T ss_pred EEEEEcCCeeEEEEEecccc------ccccccceeeeeeeeecCCc-------c------cc-cceeEEeecceeeeEee
Confidence 59999999999999997655 89999999754111001111 0 00 11358889999999999
Q ss_pred cC-ceeeEEeeecchhhhcccEEEEecccc
Q 008038 527 DN-PGAWAFHCHIEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 527 dn-pG~w~~HCHil~H~d~GM~~~~~~~~~ 555 (580)
+. +|.|.||||...|...||.+.|.+.++
T Consensus 87 ~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 87 NQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp SSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 88 999999999999988999999987653
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-06 Score=75.88 Aligned_cols=74 Identities=28% Similarity=0.470 Sum_probs=56.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|++++||+| +++|. ...+|++.+.|... .. .+...+.||+++++.|.. +|+|-|+|- .|..
T Consensus 46 P~~i~v~~Gd~V--~~~N~-~~~~H~v~~~~~~~--------~~-~~~~~~~pg~t~~~tF~~--~G~y~y~C~--~H~~ 109 (119)
T PRK02710 46 PSTLTIKAGDTV--KWVNN-KLAPHNAVFDGAKE--------LS-HKDLAFAPGESWEETFSE--AGTYTYYCE--PHRG 109 (119)
T ss_pred CCEEEEcCCCEE--EEEEC-CCCCceEEecCCcc--------cc-ccccccCCCCEEEEEecC--CEEEEEEcC--CCcc
Confidence 478999999985 56787 66788887764311 00 112357899999999975 999999997 6667
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
.||.|.|+|+
T Consensus 110 ~gM~G~I~V~ 119 (119)
T PRK02710 110 AGMVGKITVE 119 (119)
T ss_pred CCcEEEEEEC
Confidence 8999999984
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.2e-05 Score=83.15 Aligned_cols=280 Identities=16% Similarity=0.137 Sum_probs=153.3
Q ss_pred ceEEEEEEEEEEEeC------------CCCce--eEEEEEcCCCCC-----CeEEecCCCEEEEEEEeCCCCCceeeeec
Q 008038 30 KTRHYKWEVEYMFWS------------PDCKE--SIVMGINGQFPG-----PTIRARAGDTIAVELTNKLYTEGVVIHWH 90 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~------------~~g~~--~~~~~~NG~~pg-----P~l~v~~Gd~v~v~v~N~l~~~~~siH~H 90 (580)
..+|+.|.+++=.-+ ..+.. -...++||+-.- ++|.+++|++.++|+.|..+ ..++++.
T Consensus 158 pd~E~~ill~dW~~~~~~~~l~~~~~~~~~~p~~~D~~~iNg~~g~~~~~~~~l~v~pGktY~lRiiN~g~--~~~l~F~ 235 (563)
T KOG1263|consen 158 PDKEFTILLGDWYKNLNHKNLKNFLDRTGALPNPSDGVLINGRSGFLYNCTPTLTVEPGKTYRLRIINAGL--NTSLNFS 235 (563)
T ss_pred CCceeEEEeEeeccccCHHHHHHhhccCCCCCCCCCceEECCCCCcccCceeEEEEcCCCEEEEEEEcccc--ccceEEE
Confidence 567888888752211 11212 357899998421 68999999999999999944 3444444
Q ss_pred --cccccCCCCCCCCC---C-CccccCCCCCeEEEEEEc-CCCcceeeecCcchhhc---cccEEEEEEEcCCC-----C
Q 008038 91 --GIRQLGTPWADGTA---S-ISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRS---AGLYGSLIVDVADG-----E 155 (580)
Q Consensus 91 --G~~~~~~~~~DG~~---~-~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~---~Gl~G~liV~~~~~-----~ 155 (580)
|..... ...||.- . .....|.|||++++-.++ +.++.||+-.....+.. .=+.+..+++-..+ .
T Consensus 236 I~~H~ltv-Ve~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~ 314 (563)
T KOG1263|consen 236 IANHQLTV-VEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASE 314 (563)
T ss_pred ECCeEEEE-EEecceEEeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcc
Confidence 433322 4567743 2 234678999999999999 66778998877543321 11333333332221 0
Q ss_pred CCC------CCCCcceEEEEee----c----ccCchHH-HHhh--------hcCCCCC-CCCCCceEEeCccCCCCcc--
Q 008038 156 KEP------FHYDGEFNLLLSD----W----WHRSVHE-QEVG--------LSSRPLR-WIGEPQTLLINGRGQFNCS-- 209 (580)
Q Consensus 156 ~~p------~~~d~e~~l~~~d----~----~~~~~~~-~~~~--------~~~~~~~-~~~~~~~~liNG~~~~~~~-- 209 (580)
..| ...+....+-... . ......+ .... ....... .........||+..+..-.
T Consensus 315 ~~~~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~tp 394 (563)
T KOG1263|consen 315 KLPIYPFLPPGNDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPKTP 394 (563)
T ss_pred cCcccccCCcccCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCCCc
Confidence 000 0001000000000 0 0000000 0000 0000000 0011223445554332110
Q ss_pred --ccccccCC-----Cccccccc--CC--C-CCCceEEEEecCCEEEEEEeecCCce--eEEEEEeCeeeEEEEECCc-c
Q 008038 210 --LAAHFSNG-----SAEQCKLR--GN--E-QCAPQILHVQPNKTYRLRIASTTALA--SLNLAVKNHKMVVVEADGN-Y 274 (580)
Q Consensus 210 --~~~~~~~~-----~~~~~~~~--~~--~-~~~~~~~~v~~Ge~~rlRliNag~~~--~~~~~i~gh~~~via~DG~-~ 274 (580)
+++.|... ....|... .+ + ......++++-++.+.+=|-|.+... .|.+|+|||.|.|++.+.+ .
T Consensus 395 ~~l~~~~~~~~~~~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~ 474 (563)
T KOG1263|consen 395 SLLAAYFKNIPGYFTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNW 474 (563)
T ss_pred hhhhhhhccCCccccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEeccccc
Confidence 01111111 11123210 00 0 12334688989999999999988552 3667999999999999432 1
Q ss_pred ------------cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 275 ------------VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 275 ------------v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
..|+..++|.|.||.=.-+.+.+++ +|-|.||||....
T Consensus 475 ~~~~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adN--PG~W~~HCHie~H 524 (563)
T KOG1263|consen 475 DPAKDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVADN--PGVWLMHCHIEDH 524 (563)
T ss_pred CcCcChhhhcccCCCcccceEEeCCCCEEEEEEEcCC--CcEEEEEEecHHH
Confidence 1366789999999999999999998 9999999997554
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.3e-06 Score=73.30 Aligned_cols=84 Identities=26% Similarity=0.364 Sum_probs=58.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC--ccccCCCCCeEEEEEEcCCCcceeeecCcc
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI--SQCPINPGETYLYRFKVDKAGTYFYHGHLG 136 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~--~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~ 136 (580)
|-...|++++||+| +++|. ...++++.++...... ...+..+.. +...+.||+++++.|.. +|+|.|+|.
T Consensus 14 F~P~~i~v~~G~~V--~~~N~-~~~~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pG~t~~~tF~~--~G~y~y~C~-- 85 (99)
T TIGR02656 14 FEPAKISIAAGDTV--EWVNN-KGGPHNVVFDEDAVPA-GVKELAKSLSHKDLLNSPGESYEVTFST--PGTYTFYCE-- 85 (99)
T ss_pred EeCCEEEECCCCEE--EEEEC-CCCCceEEECCCCCcc-chhhhcccccccccccCCCCEEEEEeCC--CEEEEEEcC--
Confidence 33578999999986 55687 5678888876432210 000001111 23457899999998875 999999998
Q ss_pred hhhccccEEEEEEE
Q 008038 137 MQRSAGLYGSLIVD 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
.+...||.|.|+|+
T Consensus 86 ~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 86 PHRGAGMVGKITVE 99 (99)
T ss_pred CccccCCEEEEEEC
Confidence 78888999999984
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.7e-06 Score=73.52 Aligned_cols=73 Identities=26% Similarity=0.354 Sum_probs=47.7
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
+-...|+++.|+.|+|+++|. ...++.+...++.. ...|.||++.++.|++.++|+|=|+|-...
T Consensus 32 f~P~~i~v~~G~~v~l~~~N~-~~~~h~~~i~~~~~-------------~~~l~~g~~~~~~f~~~~~G~y~~~C~~~~- 96 (104)
T PF13473_consen 32 FSPSTITVKAGQPVTLTFTNN-DSRPHEFVIPDLGI-------------SKVLPPGETATVTFTPLKPGEYEFYCTMHP- 96 (104)
T ss_dssp EES-EEEEETTCEEEEEEEE--SSS-EEEEEGGGTE-------------EEEE-TT-EEEEEEEE-S-EEEEEB-SSS--
T ss_pred EecCEEEEcCCCeEEEEEEEC-CCCcEEEEECCCce-------------EEEECCCCEEEEEEcCCCCEEEEEEcCCCC-
Confidence 334689999999999999999 67777776666433 247999999999999999999999998555
Q ss_pred hccccEEEEEE
Q 008038 139 RSAGLYGSLIV 149 (580)
Q Consensus 139 ~~~Gl~G~liV 149 (580)
. |.|.|+|
T Consensus 97 --~-m~G~liV 104 (104)
T PF13473_consen 97 --N-MKGTLIV 104 (104)
T ss_dssp --T-TB-----
T ss_pred --c-ceecccC
Confidence 2 6676665
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.3e-06 Score=69.71 Aligned_cols=84 Identities=27% Similarity=0.328 Sum_probs=56.5
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC-CCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW-ADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~-~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
-.+.|++++||+| ++.|. ...+|++.+=--....... ....+.-....+.||+++++.|+ ++|+|.|+|- . |
T Consensus 15 ~P~~i~V~~G~tV--~~~n~-~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~--~~G~y~y~C~-P-H 87 (99)
T PF00127_consen 15 DPSEITVKAGDTV--TFVNN-DSMPHNVVFVADGMPAGADSDYVPPGDSSPLLAPGETYSVTFT--KPGTYEYYCT-P-H 87 (99)
T ss_dssp ESSEEEEETTEEE--EEEEE-SSSSBEEEEETTSSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE--SSEEEEEEET-T-T
T ss_pred eCCEEEECCCCEE--EEEEC-CCCCceEEEecccccccccccccCccccceecCCCCEEEEEeC--CCeEEEEEcC-C-C
Confidence 3478999999985 56665 4567777664311000000 00000002235789999999998 8999999999 5 8
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 88 ~~~GM~G~i~V~ 99 (99)
T PF00127_consen 88 YEAGMVGTIIVE 99 (99)
T ss_dssp GGTTSEEEEEEE
T ss_pred cccCCEEEEEEC
Confidence 889999999996
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.4e-05 Score=72.03 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=58.5
Q ss_pred eEEccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEE--EeecCCCCCcccccccCCCCCCccceEEeCC---C--c
Q 008038 447 VYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWV--LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP---Y--G 518 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~v--v~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp---~--g 518 (580)
.+.++.|+.|++++.|... . .|.|-||.+.-.. ....+| .+.....-.+|+ | +
T Consensus 53 ~I~v~~Gd~V~v~v~N~~~~~------~H~~~I~~~g~~~~~~p~mdG-------------~~~~~~~~i~p~~~~g~~~ 113 (148)
T TIGR03095 53 TIVIPEGVTVHFTVINTDTDS------GHNFDISKRGPPYPYMPGMDG-------------LGFVAGTGFLPPPKSGKFG 113 (148)
T ss_pred EEEEcCCCEEEEEEEeCCCCc------cccEEeecCCCccccccccCC-------------CCccccCcccCCCCCCccc
Confidence 4899999999999999754 3 6777777432211 000000 011112222232 2 2
Q ss_pred EEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+..+.|+++.+|.|.||||+..|...||.+.|.+
T Consensus 114 ~~~~tf~f~~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 114 YTDFTYHFSTAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred eeEEEEECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence 4678888899999999999999999999999865
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00017 Score=65.14 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=74.1
Q ss_pred EEEEcCCCCC-CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCC-------CCCCCCC----CCc-----cccCCCC
Q 008038 52 VMGINGQFPG-PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT-------PWADGTA----SIS-----QCPINPG 114 (580)
Q Consensus 52 ~~~~NG~~pg-P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~-------~~~DG~~----~~~-----q~~i~pG 114 (580)
.+-|||+..| ++|.+..|=+|.|+++|. ...+|++-. +.. .+ ...||.. |.+ -..|.+|
T Consensus 74 ~fNfnGts~G~mtIyiPaGw~V~V~f~N~-e~~pHnl~i--v~n-~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~G 149 (195)
T TIGR03094 74 PFNFNGTSYGAMTIYLPAGWNVYVTFTNY-ESLPHNLKL--LPN-STQTPRGPIWAHTGKIINSTGATTSIYYGNGISSG 149 (195)
T ss_pred cccccCccCCceEEEEeCCCEEEEEEEcC-CCCCccEEE--ecC-CCCCCCccccccCceeEeecccccCcccccccccc
Confidence 3677898888 999999999999999999 677877765 221 12 2235532 222 1345678
Q ss_pred CeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcC
Q 008038 115 ETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVA 152 (580)
Q Consensus 115 ~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~ 152 (580)
++..-.|..-++|+|||-|-...|..+||+|.+||-..
T Consensus 150 qs~sg~~~~~~~G~YwlvCgipGHAesGMw~~lIVSs~ 187 (195)
T TIGR03094 150 HSRSGWWNDTSAGKYWLVCGITGHAESGMWAVVIVSSN 187 (195)
T ss_pred ceeEEEeccCCCeeEEEEcccCChhhcCcEEEEEEecC
Confidence 88777777789999999999999999999999999864
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.9e-05 Score=71.30 Aligned_cols=89 Identities=20% Similarity=0.212 Sum_probs=71.7
Q ss_pred eeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 008038 446 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 525 (580)
Q Consensus 446 ~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ 525 (580)
..+.++.|++++|+|.|.+.. ..+.|++.||+|.|++.. |.+ ..|...|++.|.+|+++-|.++
T Consensus 60 ~~~~v~~g~~~rlRliNa~~~-----~~~~~~i~gh~~~Via~D-G~~----------v~p~~~~~l~l~~G~R~dvlv~ 123 (159)
T PF00394_consen 60 PVIKVKPGERYRLRLINAGAS-----TSFNFSIDGHPMTVIAAD-GVP----------VEPYKVDTLVLAPGQRYDVLVT 123 (159)
T ss_dssp GEEEEETTTEEEEEEEEESSS------BEEEEETTBCEEEEEET-TEE----------EEEEEESBEEE-TTEEEEEEEE
T ss_pred ceEEEcCCcEEEEEEEeccCC-----eeEEEEeeccceeEeeec-ccc----------ccccccceEEeeCCeEEEEEEE
Confidence 359999999999999997654 279999999999999983 321 1267789999999999999999
Q ss_pred ecC-ceeeEEee----ecchhhhcccEEEE
Q 008038 526 ADN-PGAWAFHC----HIEPHFHIGMGVVL 550 (580)
Q Consensus 526 adn-pG~w~~HC----Hil~H~d~GM~~~~ 550 (580)
++. +|.|.+++ +...+...|+..-+
T Consensus 124 ~~~~~g~y~i~~~~~~~~~~~~~~~~~~ai 153 (159)
T PF00394_consen 124 ADQPPGNYWIRASYQHDSINDPQNGNALAI 153 (159)
T ss_dssp ECSCSSEEEEEEEESSSSSHSHGGGTTEEE
T ss_pred eCCCCCeEEEEEecccCCCccCCCcEEEEE
Confidence 987 99999999 55666777765544
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=6e-05 Score=81.68 Aligned_cols=97 Identities=21% Similarity=0.290 Sum_probs=68.3
Q ss_pred eCCCCceeE--EEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEE
Q 008038 43 WSPDCKESI--VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYR 120 (580)
Q Consensus 43 ~~~~g~~~~--~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~ 120 (580)
+..+|.... +....-.|--+.|+|++||.|.++|+|. ....=. .||..+.+. |. ..-+.||++.+..
T Consensus 534 v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~-d~~~DV--iHGF~Ip~~----nI----~~dv~PG~t~svt 602 (635)
T PRK02888 534 VIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNL-DKVEDL--THGFAIPNY----GV----NMEVAPQATASVT 602 (635)
T ss_pred eEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeC-Cccccc--ccceeeccc----Cc----cEEEcCCceEEEE
Confidence 445664443 4566666756789999999999999995 211111 155544221 11 3457899999999
Q ss_pred EEcCCCcceeeecCc---chhhccccEEEEEEEcC
Q 008038 121 FKVDKAGTYFYHGHL---GMQRSAGLYGSLIVDVA 152 (580)
Q Consensus 121 f~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~ 152 (580)
|+++++|+|||||.. ..| .+|.|.|+|+++
T Consensus 603 F~adkPGvy~~~CtefCGa~H--~~M~G~~iVep~ 635 (635)
T PRK02888 603 FTADKPGVYWYYCTWFCHALH--MEMRGRMLVEPK 635 (635)
T ss_pred EEcCCCEEEEEECCcccccCc--ccceEEEEEEeC
Confidence 999999999999983 344 479999999873
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00023 Score=65.74 Aligned_cols=101 Identities=21% Similarity=0.212 Sum_probs=76.1
Q ss_pred EEEEcCCCCC-CeEEecCCCEEEEEEEeCCCCCceeeeec--cccc--cCCCCCCCCC----CC-----ccccCCCCCeE
Q 008038 52 VMGINGQFPG-PTIRARAGDTIAVELTNKLYTEGVVIHWH--GIRQ--LGTPWADGTA----SI-----SQCPINPGETY 117 (580)
Q Consensus 52 ~~~~NG~~pg-P~l~v~~Gd~v~v~v~N~l~~~~~siH~H--G~~~--~~~~~~DG~~----~~-----~q~~i~pG~~~ 117 (580)
.+-|||..-| ++|.+..|-+|.|+++|. ...+|++-.= +..+ ......||.- |. .-..|.+|++.
T Consensus 75 ~~nfnGts~G~m~i~VPAGw~V~i~f~N~-~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~ 153 (196)
T PF06525_consen 75 PFNFNGTSNGQMTIYVPAGWNVQITFTNQ-ESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSA 153 (196)
T ss_pred ceeeecccCCcEEEEEcCCCEEEEEEEcC-CCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCcee
Confidence 6788998777 899999999999999999 6666665433 1111 1123445522 11 22467899999
Q ss_pred EEEEEcCCCcceeeecCcchhhccccEEEEEEEcCC
Q 008038 118 LYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 118 ~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~ 153 (580)
.-.|..-++|+||+-|-...|..+||++-|+|...-
T Consensus 154 ~~~~~~l~aG~YwlvC~ipGHA~sGMw~~LiVs~~v 189 (196)
T PF06525_consen 154 SGVYNDLPAGYYWLVCGIPGHAESGMWGVLIVSSNV 189 (196)
T ss_pred eEEEccCCCceEEEEccCCChhhcCCEEEEEEecCc
Confidence 878877889999999999999999999999998753
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0003 Score=56.94 Aligned_cols=74 Identities=23% Similarity=0.314 Sum_probs=50.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|++++||+| +++|. ...++++++..-... ..+ .....+.||+++++.| .++|+|-|||-...
T Consensus 10 P~~i~v~~GdtV--t~~N~-d~~~Hnv~~~~g~~~---~~~----~~~~~~~~g~~~~~tf--~~~G~y~y~C~~Hp--- 74 (83)
T TIGR02657 10 TPELHVKVGDTV--TWINR-EAMPHNVHFVAGVLG---EAA----LKGPMMKKEQAYSLTF--TEAGTYDYHCTPHP--- 74 (83)
T ss_pred CCEEEECCCCEE--EEEEC-CCCCccEEecCCCCc---ccc----ccccccCCCCEEEEEC--CCCEEEEEEcCCCC---
Confidence 478999999996 56788 567888887642110 011 0012356788877666 67999999996322
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
.|.|.++|+
T Consensus 75 -~M~G~v~V~ 83 (83)
T TIGR02657 75 -FMRGKVVVE 83 (83)
T ss_pred -CCeEEEEEC
Confidence 499999885
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00025 Score=59.48 Aligned_cols=80 Identities=18% Similarity=0.225 Sum_probs=56.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|+ |.+.. .|.+.++...+..-.. .+ ......+++.+.||+...+.|..
T Consensus 19 i~v~~G~~V~~~--N~~~~------~H~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~pG~t~~~tF~~- 76 (99)
T TIGR02656 19 ISIAAGDTVEWV--NNKGG------PHNVVFDEDAVPAGVK---EL----------AKSLSHKDLLNSPGESYEVTFST- 76 (99)
T ss_pred EEECCCCEEEEE--ECCCC------CceEEECCCCCccchh---hh----------cccccccccccCCCCEEEEEeCC-
Confidence 899999999887 54444 7888776543221100 00 00122466788999998887664
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
||.|.|||- .|...||.+.+.|
T Consensus 77 -~G~y~y~C~--~H~~aGM~G~I~V 98 (99)
T TIGR02656 77 -PGTYTFYCE--PHRGAGMVGKITV 98 (99)
T ss_pred -CEEEEEEcC--CccccCCEEEEEE
Confidence 999999998 8999999999865
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00057 Score=58.70 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=51.3
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~ 139 (580)
...|+|++||+|+....|. ++++.+ .+.. -+|... ..-.+|+++++.| +++|+|=|+|- .|.
T Consensus 14 P~~v~V~~GdTV~f~n~d~----~Hnv~~~~~~~------p~g~~~---~~s~~g~~~~~tF--~~~G~Y~Y~C~--pH~ 76 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK----GHNVETIKGMI------PEGAEA---FKSKINEEYTVTV--TEEGVYGVKCT--PHY 76 (116)
T ss_pred CCEEEECCCCEEEEEECCC----CeeEEEccCCC------cCCccc---ccCCCCCEEEEEe--CCCEEEEEEcC--CCc
Confidence 4789999999966555543 466554 2211 122211 1223566666666 68999999998 777
Q ss_pred ccccEEEEEEEcCCC
Q 008038 140 SAGLYGSLIVDVADG 154 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~ 154 (580)
..||.|.|+|.+++.
T Consensus 77 ~~GM~G~V~Vg~~~~ 91 (116)
T TIGR02375 77 GMGMVALIQVGDPPA 91 (116)
T ss_pred cCCCEEEEEECCCCc
Confidence 899999999987543
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0014 Score=57.24 Aligned_cols=58 Identities=22% Similarity=0.394 Sum_probs=48.8
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.+.|.+.. .|.|-++++.+ ...|+||+...++|.++
T Consensus 63 I~VkaGD~Vtl~vtN~d~~------~H~f~i~~~gi---------------------------s~~I~pGet~TitF~ad 109 (135)
T TIGR03096 63 LVVKKGTPVKVTVENKSPI------SEGFSIDAYGI---------------------------SEVIKAGETKTISFKAD 109 (135)
T ss_pred EEECCCCEEEEEEEeCCCC------ccceEECCCCc---------------------------ceEECCCCeEEEEEECC
Confidence 8899999999999998765 77777665421 34678899999999999
Q ss_pred CceeeEEeeec
Q 008038 528 NPGAWAFHCHI 538 (580)
Q Consensus 528 npG~w~~HCHi 538 (580)
.||.|-|||-+
T Consensus 110 KpG~Y~y~C~~ 120 (135)
T TIGR03096 110 KAGAFTIWCQL 120 (135)
T ss_pred CCEEEEEeCCC
Confidence 99999999974
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0029 Score=54.25 Aligned_cols=77 Identities=26% Similarity=0.397 Sum_probs=52.0
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
|-...|+|++||+|+ ++|+....+|++..-+ +..+ | .......+|++|++.| .++|+|-|+|- .|
T Consensus 39 F~P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~f-~----s~~~~~~~G~t~s~Tf--~~~G~Y~Y~C~--pH 103 (115)
T TIGR03102 39 FDPPAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGDL-D----ESERVSEEGTTYEHTF--EEPGIYLYVCV--PH 103 (115)
T ss_pred EeCCEEEECCCCEEE--EEECCCCCCEEEEECC----CCCc-c----ccccccCCCCEEEEEe--cCCcEEEEEcc--CC
Confidence 334789999999955 6654234667775421 0011 1 0112357899999988 57999999996 44
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 104 ~~~gM~G~I~V~ 115 (115)
T TIGR03102 104 EALGMKGAVVVE 115 (115)
T ss_pred CCCCCEEEEEEC
Confidence 557899999984
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0019 Score=56.05 Aligned_cols=75 Identities=23% Similarity=0.392 Sum_probs=53.0
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhcc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSA 141 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~ 141 (580)
-.|+|++||+ |++.|. ....|+++.-+... + +|.- ...-.+|+++++.|. .+|+|-|+|- -|+.+
T Consensus 54 A~v~v~pGDT--Vtw~~~-d~~~Hnv~~~~~~~---~--~g~~---~~~~~~~~s~~~Tfe--~~G~Y~Y~C~--PH~~~ 118 (128)
T COG3794 54 AEVTVKPGDT--VTWVNT-DSVGHNVTAVGGMD---P--EGSG---TLKAGINESFTHTFE--TPGEYTYYCT--PHPGM 118 (128)
T ss_pred cEEEECCCCE--EEEEEC-CCCCceEEEeCCCC---c--cccc---ccccCCCcceEEEec--ccceEEEEec--cCCCC
Confidence 4799999999 677888 55588887766541 1 2321 233445577777664 5999999994 34568
Q ss_pred ccEEEEEEEc
Q 008038 142 GLYGSLIVDV 151 (580)
Q Consensus 142 Gl~G~liV~~ 151 (580)
||.|.|+|++
T Consensus 119 gM~G~IvV~~ 128 (128)
T COG3794 119 GMKGKIVVGE 128 (128)
T ss_pred CcEEEEEeCC
Confidence 9999999974
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.016 Score=48.58 Aligned_cols=80 Identities=16% Similarity=0.342 Sum_probs=52.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-ccccccCCCCCCccceEEeCCCcEEEEEEE
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFV 525 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ 525 (580)
.+.++.|++|.|+..+ .. .|.+++ ... .++. .+..... ..-.+..+.+|....+.|.
T Consensus 18 ~i~V~~G~tV~~~n~~--~~------~Hnv~~-------~~~---~~~~~~~~~~~~----~~~~~~~~~~G~~~~~tF~ 75 (99)
T PF00127_consen 18 EITVKAGDTVTFVNND--SM------PHNVVF-------VAD---GMPAGADSDYVP----PGDSSPLLAPGETYSVTFT 75 (99)
T ss_dssp EEEEETTEEEEEEEES--SS------SBEEEE-------ETT---SSHTTGGHCHHS----TTCEEEEBSTTEEEEEEEE
T ss_pred EEEECCCCEEEEEECC--CC------CceEEE-------ecc---cccccccccccC----ccccceecCCCCEEEEEeC
Confidence 3889999999987653 33 455443 321 1100 0011110 1115677888998888777
Q ss_pred ecCceeeEEeeecchhhhcccEEEEec
Q 008038 526 ADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 526 adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.+|.|.|+|- - |...||-+.+.|
T Consensus 76 --~~G~y~y~C~-P-H~~~GM~G~i~V 98 (99)
T PF00127_consen 76 --KPGTYEYYCT-P-HYEAGMVGTIIV 98 (99)
T ss_dssp --SSEEEEEEET-T-TGGTTSEEEEEE
T ss_pred --CCeEEEEEcC-C-CcccCCEEEEEE
Confidence 9999999999 5 999999999865
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=49.66 Aligned_cols=67 Identities=18% Similarity=0.319 Sum_probs=42.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.+.+.+.|.+.. .|-|.+-+ . .-...|+||+...+.|.+
T Consensus 36 ~i~v~~G~~v~l~~~N~~~~------~h~~~i~~-------~--------------------~~~~~l~~g~~~~~~f~~ 82 (104)
T PF13473_consen 36 TITVKAGQPVTLTFTNNDSR------PHEFVIPD-------L--------------------GISKVLPPGETATVTFTP 82 (104)
T ss_dssp EEEEETTCEEEEEEEE-SSS-------EEEEEGG-------G--------------------TEEEEE-TT-EEEEEEEE
T ss_pred EEEEcCCCeEEEEEEECCCC------cEEEEECC-------C--------------------ceEEEECCCCEEEEEEcC
Confidence 38999999999999998754 44444443 1 123678899999999999
Q ss_pred cCceeeEEeeecchhhhcccE
Q 008038 527 DNPGAWAFHCHIEPHFHIGMG 547 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~ 547 (580)
+.||.|-|+|-+-.+ ..|..
T Consensus 83 ~~~G~y~~~C~~~~~-m~G~l 102 (104)
T PF13473_consen 83 LKPGEYEFYCTMHPN-MKGTL 102 (104)
T ss_dssp -S-EEEEEB-SSS-T-TB---
T ss_pred CCCEEEEEEcCCCCc-ceecc
Confidence 999999999995554 35543
|
|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.035 Score=48.17 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=49.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|+ |.+.. .|.+.+.+... + .. .-..+.||....+.|..
T Consensus 49 i~v~~Gd~V~~~--N~~~~------~H~v~~~~~~~---------~-------------~~-~~~~~~pg~t~~~tF~~- 96 (119)
T PRK02710 49 LTIKAGDTVKWV--NNKLA------PHNAVFDGAKE---------L-------------SH-KDLAFAPGESWEETFSE- 96 (119)
T ss_pred EEEcCCCEEEEE--ECCCC------CceEEecCCcc---------c-------------cc-cccccCCCCEEEEEecC-
Confidence 889999999885 54444 78776542210 0 00 11346788887777764
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
||.|.|+|= .|...||-+.+.|
T Consensus 97 -~G~y~y~C~--~H~~~gM~G~I~V 118 (119)
T PRK02710 97 -AGTYTYYCE--PHRGAGMVGKITV 118 (119)
T ss_pred -CEEEEEEcC--CCccCCcEEEEEE
Confidence 999999997 8999999999876
|
|
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.065 Score=46.52 Aligned_cols=74 Identities=22% Similarity=0.212 Sum_probs=52.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc-chhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL-GMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-~~~~ 139 (580)
.+.|.+..|+.|++.+++. +..|++...++.. +.-+.||+.-...|+++++|+|++.|.- -...
T Consensus 45 ~~~l~lp~g~~v~~~ltS~--DViHsf~ip~~~~-------------k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~g 109 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE--DVIHSFWIPELGI-------------KMDAIPGRTNSVTFTPDKPGTYYGQCAEYCGAG 109 (120)
T ss_dssp SSEEEEETTSEEEEEEEES--SS-EEEEETTCTE-------------EEEEBTTCEEEEEEEESSSEEEEEEE-SSSSTT
T ss_pred cceecccccceEeEEEEcC--CccccccccccCc-------------ccccccccceeeeeeeccCCcEEEcCccccCcC
Confidence 4789999999999999998 5556655554432 3457899999999999999999999982 1111
Q ss_pred ccccEEEEEE
Q 008038 140 SAGLYGSLIV 149 (580)
Q Consensus 140 ~~Gl~G~liV 149 (580)
-.-|.|-++|
T Consensus 110 H~~M~~~v~V 119 (120)
T PF00116_consen 110 HSFMPGKVIV 119 (120)
T ss_dssp GGG-EEEEEE
T ss_pred cCCCeEEEEE
Confidence 1336666654
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.046 Score=59.88 Aligned_cols=78 Identities=18% Similarity=0.283 Sum_probs=54.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
-+.++.|+.|.+++.|.... .+..|-|-+-++.. -+.+.||....+.|++
T Consensus 556 ~i~Vk~GDeVt~~lTN~d~~---~DViHGF~Ip~~nI---------------------------~~dv~PG~t~svtF~a 605 (635)
T PRK02888 556 EFTVKQGDEVTVIVTNLDKV---EDLTHGFAIPNYGV---------------------------NMEVAPQATASVTFTA 605 (635)
T ss_pred eEEecCCCEEEEEEEeCCcc---cccccceeecccCc---------------------------cEEEcCCceEEEEEEc
Confidence 37789999999999996431 12256666633321 2356689999999999
Q ss_pred cCceeeEEeeecchhhh-cccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFH-IGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d-~GM~~~~~~~~ 554 (580)
+.||.|.+||...-|.. .+|.+.+.|.+
T Consensus 606 dkPGvy~~~CtefCGa~H~~M~G~~iVep 634 (635)
T PRK02888 606 DKPGVYWYYCTWFCHALHMEMRGRMLVEP 634 (635)
T ss_pred CCCEEEEEECCcccccCcccceEEEEEEe
Confidence 99999999998633221 36777776643
|
|
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.06 Score=47.88 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=65.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
..++.|++++.++.|.... -|=|-+- ++.... +.+.- .....-..---..++.|.||....+-+.+.
T Consensus 65 ~~v~aG~tv~~v~~n~~el------~hef~~~---~~~~~~--~~~~~--~~~~~Dme~d~~~~v~L~PG~s~elvv~ft 131 (158)
T COG4454 65 FEVKAGETVRFVLKNEGEL------KHEFTMD---APDKNL--EHVTH--MILADDMEHDDPNTVTLAPGKSGELVVVFT 131 (158)
T ss_pred ccccCCcEEeeeecCcccc------eEEEecc---Cccccc--hhHHH--hhhCCccccCCcceeEeCCCCcEEEEEEec
Confidence 7789999999999998876 5555443 111111 11110 000000001234689999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
++|.|-|-|=|-+|-+.||-+.|.+.+
T Consensus 132 ~~g~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 132 GAGKYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred CCccEEEEecCCCcccCCcEEEEEeCC
Confidence 999999999999999999999997753
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.42 Score=41.09 Aligned_cols=35 Identities=20% Similarity=0.495 Sum_probs=28.9
Q ss_pred CCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 516 PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 516 p~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
++.. +.++++.+|.|-|+|= .|...||-+.+.|+.
T Consensus 54 ~g~~--~~~tF~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~ 88 (116)
T TIGR02375 54 INEE--YTVTVTEEGVYGVKCT--PHYGMGMVALIQVGD 88 (116)
T ss_pred CCCE--EEEEeCCCEEEEEEcC--CCccCCCEEEEEECC
Confidence 4554 4455578999999998 999999999998876
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.6 Score=41.67 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=65.9
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCC-----------ceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCC
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTE-----------GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~-----------~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~ 126 (580)
.+++-.+.++.|++++..+.|. ... +...-.|.... +.+++.- .....+.||++-+..|...++
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~-~el~hef~~~~~~~~~~~~~~~~~~---~Dme~d~-~~~v~L~PG~s~elvv~ft~~ 133 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNE-GELKHEFTMDAPDKNLEHVTHMILA---DDMEHDD-PNTVTLAPGKSGELVVVFTGA 133 (158)
T ss_pred ccCCCcccccCCcEEeeeecCc-ccceEEEeccCccccchhHHHhhhC---CccccCC-cceeEeCCCCcEEEEEEecCC
Confidence 4677889999999999999997 321 11111222222 2333321 124678999999999999999
Q ss_pred cceeeecCcchhhccccEEEEEEEc
Q 008038 127 GTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 127 Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
|.|=+-|-..+++..||.|-|.|.+
T Consensus 134 g~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 134 GKYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred ccEEEEecCCCcccCCcEEEEEeCC
Confidence 9999999999999999999998864
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.77 Score=36.87 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=44.0
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|.| .|.+.. .|..+.+.-.+ +.. .+. ...+.++.... ++++
T Consensus 13 i~v~~GdtVt~--~N~d~~------~Hnv~~~~g~~-------~~~-------------~~~-~~~~~~g~~~~--~tf~ 61 (83)
T TIGR02657 13 LHVKVGDTVTW--INREAM------PHNVHFVAGVL-------GEA-------------ALK-GPMMKKEQAYS--LTFT 61 (83)
T ss_pred EEECCCCEEEE--EECCCC------CccEEecCCCC-------ccc-------------ccc-ccccCCCCEEE--EECC
Confidence 88999999998 465545 78887653221 000 011 11234555544 5667
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|.|||=+ |- +|-+.+.|
T Consensus 62 ~~G~y~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 62 EAGTYDYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred CCEEEEEEcCC--CC--CCeEEEEE
Confidence 89999999986 55 47777654
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=91.80 E-value=1.9 Score=44.82 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=53.4
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC--CCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA--SISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~--~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
++--..+.++.|+ +.+.|+|. ...++..-.- +|+- + ....|.||.+.++.+++ ++|+|-|+|
T Consensus 40 ~c~p~~~tVpAG~-~~f~V~N~-~~~~~Efe~~----------~~~~vv~-e~EnIaPG~s~~l~~~L-~pGtY~~~C-- 103 (375)
T PRK10378 40 QCEPMTLTVNAGK-TQFIIQNH-SQKALEWEIL----------KGVMVVE-ERENIAPGFSQKMTANL-QPGEYDMTC-- 103 (375)
T ss_pred ccccCceeeCCCC-EEEEEEeC-CCCcceEEee----------ccccccc-cccccCCCCceEEEEec-CCceEEeec--
Confidence 4555789999996 89999999 5554332111 1110 0 12479999999888776 799999999
Q ss_pred chhhccccEEEEEEEcCC
Q 008038 136 GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~~~ 153 (580)
+.+ ..+.|.|+|....
T Consensus 104 ~~~--~~~~g~l~Vtg~~ 119 (375)
T PRK10378 104 GLL--TNPKGKLIVKGEA 119 (375)
T ss_pred CcC--CCCCceEEEeCCC
Confidence 333 3358999998643
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=91.70 E-value=1.8 Score=41.27 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=56.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc-chhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL-GMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-~~~~ 139 (580)
.+.|.+..|+.|++++++. +.. ||...+. . |. +..+-||..-+..|+++++|+|...|.- -...
T Consensus 116 ~~~l~vp~g~~v~~~~ts~--DV~-----Hsf~ip~---~-~~----k~da~PG~~~~~~~~~~~~G~y~~~c~e~cG~~ 180 (201)
T TIGR02866 116 VNELVVPAGTPVRLQVTSK--DVI-----HSFWVPE---L-GG----KIDAIPGQYNALWFNADEPGVYYGYCAELCGAG 180 (201)
T ss_pred cCEEEEEcCCEEEEEEEeC--chh-----hcccccc---c-Cc----eEEecCCcEEEEEEEeCCCEEEEEEehhhCCcC
Confidence 3689999999999999998 322 4444321 1 11 4557789999999999999999999982 1222
Q ss_pred ccccEEEEEEEcC
Q 008038 140 SAGLYGSLIVDVA 152 (580)
Q Consensus 140 ~~Gl~G~liV~~~ 152 (580)
-+.|.+-++|.++
T Consensus 181 h~~M~~~v~v~~~ 193 (201)
T TIGR02866 181 HSLMLFKVVVVER 193 (201)
T ss_pred ccCCeEEEEEECH
Confidence 2558999998874
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=90.84 E-value=2.5 Score=36.57 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=47.0
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
..+.++.|+.++|++-+... .|.|.|.+..+. +.+-||+.-.+.+++++ +|.|+++|...
T Consensus 46 ~~l~lp~g~~v~~~ltS~DV--iHsf~ip~~~~k----------------~d~~PG~~~~~~~~~~~--~G~y~~~C~e~ 105 (120)
T PF00116_consen 46 NELVLPAGQPVRFHLTSEDV--IHSFWIPELGIK----------------MDAIPGRTNSVTFTPDK--PGTYYGQCAEY 105 (120)
T ss_dssp SEEEEETTSEEEEEEEESSS---EEEEETTCTEE----------------EEEBTTCEEEEEEEESS--SEEEEEEE-SS
T ss_pred ceecccccceEeEEEEcCCc--cccccccccCcc----------------cccccccceeeeeeecc--CCcEEEcCccc
Confidence 47999999999999999553 577777765443 45678999999999987 89999999754
Q ss_pred C
Q 008038 313 G 313 (580)
Q Consensus 313 ~ 313 (580)
-
T Consensus 106 C 106 (120)
T PF00116_consen 106 C 106 (120)
T ss_dssp S
T ss_pred c
Confidence 3
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=90.70 E-value=1.6 Score=37.52 Aligned_cols=71 Identities=21% Similarity=0.266 Sum_probs=46.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|.|+-.+ ... .|-.. ..+.+.|+. ......+|....+.| +
T Consensus 44 ltV~~GdTVtw~~~~-d~~------~HnV~---------s~~~~~f~s--------------~~~~~~~G~t~s~Tf--~ 91 (115)
T TIGR03102 44 IRVDPGTTVVWEWTG-EGG------GHNVV---------SDGDGDLDE--------------SERVSEEGTTYEHTF--E 91 (115)
T ss_pred EEECCCCEEEEEECC-CCC------CEEEE---------ECCCCCccc--------------cccccCCCCEEEEEe--c
Confidence 899999999996433 212 45442 222223320 112234566655555 7
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|-|+|= .|...||-+.+.|
T Consensus 92 ~~G~Y~Y~C~--pH~~~gM~G~I~V 114 (115)
T TIGR03102 92 EPGIYLYVCV--PHEALGMKGAVVV 114 (115)
T ss_pred CCcEEEEEcc--CCCCCCCEEEEEE
Confidence 8999999998 8999999999876
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=90.69 E-value=2.4 Score=39.66 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=59.8
Q ss_pred ceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc----ccccccC-C-CCCCccceEEeCCCc
Q 008038 445 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK----EDEKKFN-L-KNPPLKNTAVIFPYG 518 (580)
Q Consensus 445 ~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~----~~~~~~~-~-~~p~~rDTv~vpp~g 518 (580)
...+.++.|-.|.+++.|.+.+ . |.|-|+..+...... .|.+-+. . ..+.--..--+++|.
T Consensus 85 ~m~i~VPAGw~V~i~f~N~~~l------~-------Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~ 151 (196)
T PF06525_consen 85 QMTIYVPAGWNVQITFTNQESL------P-------HNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQ 151 (196)
T ss_pred cEEEEEcCCCEEEEEEEcCCCC------C-------eeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCc
Confidence 3458899999999999998766 4 456666543211110 1111000 0 000000011233555
Q ss_pred EEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 519 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
....-+..-.||.|.+=|=+.-|...||-..|.++.
T Consensus 152 s~~~~~~~l~aG~YwlvC~ipGHA~sGMw~~LiVs~ 187 (196)
T PF06525_consen 152 SASGVYNDLPAGYYWLVCGIPGHAESGMWGVLIVSS 187 (196)
T ss_pred eeeEEEccCCCceEEEEccCCChhhcCCEEEEEEec
Confidence 555556556799999999999999999999998875
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=90.46 E-value=1.6 Score=37.62 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=55.6
Q ss_pred CCeEEecCC-CEEEEEEEeCCCCCceeeeeccccccCC--------------CCCCCCCC----C--ccccCCCCCeEEE
Q 008038 61 GPTIRARAG-DTIAVELTNKLYTEGVVIHWHGIRQLGT--------------PWADGTAS----I--SQCPINPGETYLY 119 (580)
Q Consensus 61 gP~l~v~~G-d~v~v~v~N~l~~~~~siH~HG~~~~~~--------------~~~DG~~~----~--~q~~i~pG~~~~y 119 (580)
-..|.|+.+ .+|.|+|+|. ...|...=-|.+-...+ ...|=+|. | ...-|.|||+.+.
T Consensus 15 ~~~i~V~a~~k~vtv~l~h~-G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~sv 93 (125)
T TIGR02695 15 TKSISVPKSCKEFTVNLKHT-GKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSV 93 (125)
T ss_pred ccEEEEcCCCcEEEEEEecC-CcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEE
Confidence 468999985 7899999998 54443332232111000 11122221 1 1245789999999
Q ss_pred EEEcC--CCcc-eeeecCcchhhccccEEEEE
Q 008038 120 RFKVD--KAGT-YFYHGHLGMQRSAGLYGSLI 148 (580)
Q Consensus 120 ~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~li 148 (580)
.|++. ++|+ |-|-|-...|.. .|.|.|.
T Consensus 94 tF~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~ 124 (125)
T TIGR02695 94 TFDVSKLSAGEDYTFFCSFPGHWA-MMRGTVK 124 (125)
T ss_pred EEECCCCCCCCcceEEEcCCCcHH-hceEEEe
Confidence 99984 6886 999999888876 4888875
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=90.26 E-value=1 Score=44.21 Aligned_cols=79 Identities=15% Similarity=0.042 Sum_probs=61.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~ 139 (580)
.+.|.+..|..|++.++-. +.-+++...++.. +...-||...+..++++++|+|.-+|+ .-...
T Consensus 136 ~n~l~lPv~~~V~f~ltS~--DViHsF~IP~l~~-------------k~d~iPG~~~~~~~~~~~~G~Y~g~Cae~CG~g 200 (247)
T COG1622 136 VNELVLPVGRPVRFKLTSA--DVIHSFWIPQLGG-------------KIDAIPGMTTELWLTANKPGTYRGICAEYCGPG 200 (247)
T ss_pred cceEEEeCCCeEEEEEEec--hhceeEEecCCCc-------------eeeecCCceEEEEEecCCCeEEEEEcHhhcCCC
Confidence 3899999999999999988 4555555554432 456778999999999999999999999 34444
Q ss_pred ccccEEEEEEEcCCC
Q 008038 140 SAGLYGSLIVDVADG 154 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~ 154 (580)
-..|.|.++|.++++
T Consensus 201 H~~M~~~v~vvs~~~ 215 (247)
T COG1622 201 HSFMRFKVIVVSQED 215 (247)
T ss_pred cccceEEEEEEcHHH
Confidence 466999999998653
|
|
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=89.20 E-value=3 Score=38.29 Aligned_cols=98 Identities=17% Similarity=0.116 Sum_probs=60.1
Q ss_pred CceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC-CCCc---ccccccCCC--CCCccceEEeCCC
Q 008038 444 GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG-KFTK---EDEKKFNLK--NPPLKNTAVIFPY 517 (580)
Q Consensus 444 ~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g-~~~~---~~~~~~~~~--~p~~rDTv~vpp~ 517 (580)
+...+.++.|-.|.++|.|...+ +|.+ -++..+.. .+.+ .|.+..+.. .+..-..=-+..|
T Consensus 83 G~mtIyiPaGw~V~V~f~N~e~~------pHnl-------~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~G 149 (195)
T TIGR03094 83 GAMTIYLPAGWNVYVTFTNYESL------PHNL-------KLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSG 149 (195)
T ss_pred CceEEEEeCCCEEEEEEEcCCCC------CccE-------EEecCCCCCCCccccccCceeEeecccccCcccccccccc
Confidence 33458899999999999998866 5544 44443211 1111 111111100 0000011112345
Q ss_pred cEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 518 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 518 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
....+.|..-.||.|.+=|-+.-|.+.||-+.+.++.
T Consensus 150 qs~sg~~~~~~~G~YwlvCgipGHAesGMw~~lIVSs 186 (195)
T TIGR03094 150 HSRSGWWNDTSAGKYWLVCGITGHAESGMWAVVIVSS 186 (195)
T ss_pred ceeEEEeccCCCeeEEEEcccCChhhcCcEEEEEEec
Confidence 6666677767999999999999999999999998864
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=88.58 E-value=1.8 Score=34.72 Aligned_cols=66 Identities=17% Similarity=0.237 Sum_probs=34.8
Q ss_pred EEEEEeecCCceeEEEEEe-CeeeE--EEEECCcccC--------ceeeeeEEEcCCceEEEEEEeCCCC--CcceEEEE
Q 008038 243 YRLRIASTTALASLNLAVK-NHKMV--VVEADGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQDP--SYNYWISA 309 (580)
Q Consensus 243 ~rlRliNag~~~~~~~~i~-gh~~~--via~DG~~v~--------P~~~d~v~l~pGeR~dv~v~~~~~~--~g~y~l~~ 309 (580)
+.|++.|.+.. ...|.+. |+++. |...+|..+- -+......|.|||...+-.+.+... +|.|.+.+
T Consensus 4 ~~l~v~N~s~~-~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a 82 (82)
T PF12690_consen 4 FTLTVTNNSDE-PVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLEA 82 (82)
T ss_dssp EEEEEEE-SSS--EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred EEEEEEeCCCC-eEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence 45666776643 4555553 44333 3334555551 2346789999999999999998765 79998753
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=85.71 E-value=3.9 Score=38.98 Aligned_cols=70 Identities=27% Similarity=0.384 Sum_probs=51.1
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|++.+.+.+-+ |+|+|-+.+ .. ..+-||....+.|++
T Consensus 118 ~l~vp~g~~v~~~~ts~DV~--------------Hsf~ip~~~-----------------~k---~da~PG~~~~~~~~~ 163 (201)
T TIGR02866 118 ELVVPAGTPVRLQVTSKDVI--------------HSFWVPELG-----------------GK---IDAIPGQYNALWFNA 163 (201)
T ss_pred EEEEEcCCEEEEEEEeCchh--------------hcccccccC-----------------ce---EEecCCcEEEEEEEe
Confidence 38899999999999987654 445553321 12 235578899999999
Q ss_pred cCceeeEEeeec---chhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHI---EPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHi---l~H~d~GM~~~~~~ 552 (580)
+.||.|...|-. ..| ..|...+.+
T Consensus 164 ~~~G~y~~~c~e~cG~~h--~~M~~~v~v 190 (201)
T TIGR02866 164 DEPGVYYGYCAELCGAGH--SLMLFKVVV 190 (201)
T ss_pred CCCEEEEEEehhhCCcCc--cCCeEEEEE
Confidence 999999999998 445 556666654
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=83.77 E-value=6.6 Score=33.98 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=53.3
Q ss_pred eEEEEec-CCEEEEEEeecCCce----eEEEEEeC-eeeEEE-------EECCcccCc----eeeeeEEEcCCceEEEEE
Q 008038 233 QILHVQP-NKTYRLRIASTTALA----SLNLAVKN-HKMVVV-------EADGNYVQP----FEVDDMDIYSGESYSVLL 295 (580)
Q Consensus 233 ~~~~v~~-Ge~~rlRliNag~~~----~~~~~i~g-h~~~vi-------a~DG~~v~P----~~~d~v~l~pGeR~dv~v 295 (580)
..|+|++ ++.+.+.|-|.|... .|++-|-. ..+.-+ +.|-.|+.+ .-..+=.|.+||..+|.|
T Consensus 16 ~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~svtF 95 (125)
T TIGR02695 16 KSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSVTF 95 (125)
T ss_pred cEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEEEE
Confidence 3799998 588999999998532 35555521 122222 234455643 235677899999999999
Q ss_pred EeCCCCCc-ceEEEEeec
Q 008038 296 TTNQDPSY-NYWISAGVR 312 (580)
Q Consensus 296 ~~~~~~~g-~y~l~~~~~ 312 (580)
+.+..++| +|.+.|+..
T Consensus 96 ~~~~l~~g~~Y~f~CSFP 113 (125)
T TIGR02695 96 DVSKLSAGEDYTFFCSFP 113 (125)
T ss_pred ECCCCCCCCcceEEEcCC
Confidence 98743344 699988753
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.70 E-value=6.1 Score=34.52 Aligned_cols=30 Identities=27% Similarity=0.698 Sum_probs=24.2
Q ss_pred EEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 522 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 522 irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
..+.++.||.|.|.| ..|..+||-+.+.|+
T Consensus 98 ~~~Tfe~~G~Y~Y~C--~PH~~~gM~G~IvV~ 127 (128)
T COG3794 98 FTHTFETPGEYTYYC--TPHPGMGMKGKIVVG 127 (128)
T ss_pred eEEEecccceEEEEe--ccCCCCCcEEEEEeC
Confidence 344455599999999 579999999998775
|
|
| >COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=81.17 E-value=2 Score=44.79 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=48.5
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc-chhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL-GMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-~~~~~ 140 (580)
-++.|++||.|.+.++|-. .... -.||.-.+ .-|+ ...+.|-++..|.|.+..+|.+||.|-- -...-
T Consensus 558 ~ef~Vkq~DEVt~l~tnld-~Ved--~thgfv~p----~~~v----~~~v~pq~tasvtf~a~kpgv~w~ycs~fchalh 626 (637)
T COG4263 558 TEFKVKQGDEVTVLTTNLD-EVED--LTHGFVIP----NYGV----NMEVKPQRTASVTFYADKPGVAWYYCSWFCHALH 626 (637)
T ss_pred EEEEEecCcEEEEEecccc-eecc--ccceeeec----cCce----EEEEccCCceEEEEEccCCeeeehhhhhHHHHHH
Confidence 4677777887777777762 2222 22343321 1111 2457888999999999999999999852 22222
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
+-|.|-++|+
T Consensus 627 ~em~~rmlve 636 (637)
T COG4263 627 MEMAGRMLVE 636 (637)
T ss_pred Hhhccceeec
Confidence 3367777776
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 580 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 0.0 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 1e-44 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 3e-44 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 4e-44 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 7e-44 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 1e-43 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 1e-43 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 2e-43 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 2e-43 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 7e-42 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 2e-41 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 1e-40 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 2e-40 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 3e-40 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 3e-39 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 6e-38 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 1e-36 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 1e-35 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 7e-35 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 9e-35 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 2e-07 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 9e-35 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 5e-07 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 2e-34 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 4e-32 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 4e-32 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 5e-32 | ||
| 3g5w_A | 318 | Crystal Structure Of Blue Copper Oxidase From Nitro | 1e-15 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 2e-14 | ||
| 3gdc_A | 288 | Crystal Structure Of Multicopper Oxidase Length = 2 | 2e-10 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 2e-10 | ||
| 2bp0_B | 336 | M168l Mutant Of Nitrite Reductase From Alcaligenes | 5e-10 | ||
| 2jfc_A | 335 | M144l Mutant Of Nitrite Reductase From Alcaligenes | 6e-10 | ||
| 1wa0_X | 336 | Crystal Structure Of W138h Mutant Of Alcaligenes Xy | 6e-10 | ||
| 1oe2_A | 336 | Atomic Resolution Structure Of D92e Mutant Of Alcal | 7e-10 | ||
| 1gs8_A | 336 | Crystal Structure Of Mutant D92n Alcaligenes Xyloso | 8e-10 | ||
| 2bo0_A | 336 | Crystal Structure Of The C130a Mutant Of Nitrite Re | 9e-10 | ||
| 1wa1_X | 336 | Crystal Structure Of H313q Mutant Of Alcaligenes Xy | 1e-09 | ||
| 2xxg_A | 336 | Structure Of The N90s Mutant Of Nitrite Reductase F | 1e-09 | ||
| 2xx1_A | 336 | Structure Of The N90s Mutant Of Nitrite Reductase F | 1e-09 | ||
| 2vn3_A | 337 | Nitrite Reductase From Alcaligenes Xylosoxidans Len | 1e-09 | ||
| 1hau_A | 336 | X-Ray Structure Of A Blue Copper Nitrite Reductase | 1e-09 | ||
| 1oe1_A | 336 | Atomic Resolution Structure Of The Wildtype Native | 1e-09 | ||
| 1gs7_A | 336 | Crystal Structure Of H254f Mutant Of Alcaligenes Xy | 1e-09 | ||
| 2xx0_A | 336 | Structure Of The N90s-H254f Mutant Of Nitrite Reduc | 1e-09 | ||
| 2xwz_A | 336 | Structure Of The Recombinant Native Nitrite Reducta | 1e-09 | ||
| 2xxf_A | 336 | Cu Metallated H254f Mutant Of Nitrite Reductase Len | 1e-09 | ||
| 2bp0_A | 336 | M168l Mutant Of Nitrite Reductase From Alcaligenes | 1e-09 | ||
| 1bq5_A | 342 | Nitrite Reductase From Alcaligenes Xylosoxidans Gif | 1e-09 | ||
| 1ndt_A | 336 | Nitrite Reductase From Alcaligenes Xylosoxidans Len | 2e-09 | ||
| 1gs6_X | 336 | Crystal Structure Of M144a Mutant Of Alcaligenes Xy | 3e-09 | ||
| 2bp8_B | 336 | M168q Structure Of Nitrite Reductase From Alcaligen | 3e-09 | ||
| 2bp8_A | 336 | M168q Structure Of Nitrite Reductase From Alcaligen | 6e-09 | ||
| 1wae_A | 336 | Crystal Structure Of H129v Mutant Of Alcaligenes Xy | 7e-09 | ||
| 2vmj_A | 329 | Type 1 Copper-Binding Loop Of Nitrite Reductase Mut | 2e-08 | ||
| 2yxv_A | 446 | The Deletion Mutant Of Multicopper Oxidase Cueo Len | 3e-08 | ||
| 1pf3_A | 498 | Crystal Structure Of The M441l Mutant Of The Multic | 4e-08 | ||
| 3nsf_A | 505 | Apo Form Of The Multicopper Oxidase Cueo Length = 5 | 4e-08 | ||
| 3qqx_A | 505 | Reduced Native Intermediate Of The Multicopper Oxid | 4e-08 | ||
| 3nsc_A | 505 | C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | 4e-08 | ||
| 1kv7_A | 488 | Crystal Structure Of Cueo, A Multi-Copper Oxidase F | 5e-08 | ||
| 3uaa_A | 489 | Multicopper Oxidase Cueo Mutant C500se506q (Data1) | 6e-08 | ||
| 3nsy_A | 511 | The Multi-Copper Oxidase Cueo With Six Met To Ser M | 6e-08 | ||
| 3aw5_A | 448 | Structure Of A Multicopper Oxidase From The Hyperth | 2e-06 | ||
| 1kbw_A | 327 | Crystal Structure Of The Soluble Domain Of Ania Fro | 4e-06 | ||
| 2zoo_A | 442 | Crystal Structure Of Nitrite Reductase From Pseudoa | 1e-05 | ||
| 2j5w_A | 1065 | Ceruloplasmin Revisited: Structural And Functional | 2e-05 | ||
| 2j5w_A | 1065 | Ceruloplasmin Revisited: Structural And Functional | 8e-04 | ||
| 1kcw_A | 1046 | X-Ray Crystal Structure Of Human Ceruloplasmin At 3 | 2e-05 | ||
| 1kcw_A | 1046 | X-Ray Crystal Structure Of Human Ceruloplasmin At 3 | 8e-04 | ||
| 1ndr_A | 330 | Crystallographic Structure Of A Blue Copper Nitrite | 1e-04 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans In Space Group P212121 Length = 335 | Back alignment and structure |
|
| >pdb|1WA0|X Chain X, Crystal Structure Of W138h Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|1WA1|X Chain X, Crystal Structure Of H313q Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Complexed With Nitrite Length = 336 | Back alignment and structure |
|
| >pdb|2VN3|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Length = 337 | Back alignment and structure |
|
| >pdb|1HAU|A Chain A, X-Ray Structure Of A Blue Copper Nitrite Reductase At High Ph And In Copper Free Form At 1.9 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|1OE1|A Chain A, Atomic Resolution Structure Of The Wildtype Native Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|1GS7|A Chain A, Crystal Structure Of H254f Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|2XWZ|A Chain A, Structure Of The Recombinant Native Nitrite Reductase From Alcaligenes Xylosoxidans Complexed With Nitrite Length = 336 | Back alignment and structure |
|
| >pdb|2XXF|A Chain A, Cu Metallated H254f Mutant Of Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|1BQ5|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Gifu 1051 Length = 342 | Back alignment and structure |
|
| >pdb|1NDT|A Chain A, Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|1GS6|X Chain X, Crystal Structure Of M144a Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2BP8|B Chain B, M168q Structure Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|2BP8|A Chain A, M168q Structure Of Nitrite Reductase From Alcaligenes Xylosoxidans Length = 336 | Back alignment and structure |
|
| >pdb|1WAE|A Chain A, Crystal Structure Of H129v Mutant Of Alcaligenes Xylosoxidans Nitrite Reductase Length = 336 | Back alignment and structure |
|
| >pdb|2VMJ|A Chain A, Type 1 Copper-Binding Loop Of Nitrite Reductase Mutant: 130- Capegmvpwhvvsgm-144 To 130-Ctphpfm-136 Length = 329 | Back alignment and structure |
|
| >pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo Length = 446 | Back alignment and structure |
|
| >pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper Oxidase Cueo Length = 498 | Back alignment and structure |
|
| >pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | Back alignment and structure |
|
| >pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E. Coli Involved In Copper Homeostasis Length = 488 | Back alignment and structure |
|
| >pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1) Length = 489 | Back alignment and structure |
|
| >pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser Mutations (M358s, M361s,M362s,M364s,M366s,M368s) Length = 511 | Back alignment and structure |
|
| >pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 | Back alignment and structure |
|
| >pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From Neisseria Gonorrhoeae Length = 327 | Back alignment and structure |
|
| >pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From Pseudoalteromonas Haloplanktis Tac125 Length = 442 | Back alignment and structure |
|
| >pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of Various Metal Cation Binding Sites Length = 1065 | Back alignment and structure |
|
| >pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of Various Metal Cation Binding Sites Length = 1065 | Back alignment and structure |
|
| >pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0 Angstroms Length = 1046 | Back alignment and structure |
|
| >pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0 Angstroms Length = 1046 | Back alignment and structure |
|
| >pdb|1NDR|A Chain A, Crystallographic Structure Of A Blue Copper Nitrite Reductase From Alcaligenes Xylosoxidans Length = 330 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 580 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 0.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 0.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 1e-179 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 1e-178 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 1e-177 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 1e-175 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 1e-172 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 1e-170 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 1e-82 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 4e-08 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 2e-79 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 3e-06 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 6e-77 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 7e-68 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 8e-63 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 6e-61 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 3e-59 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 5e-48 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 3e-47 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 6e-11 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 1e-06 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 2e-45 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 6e-43 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 1e-35 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 2e-08 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 3e-31 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 3e-07 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 3e-31 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 9e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-30 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-23 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 9e-18 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-16 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 5e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-07 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-04 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 1e-29 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 5e-11 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 3e-27 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 4e-12 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 2e-05 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 9e-27 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 3e-07 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 3e-26 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 1e-04 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 4e-26 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 1e-14 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 1e-08 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 5e-24 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-22 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 2e-12 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 4e-04 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 8e-22 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 5e-05 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 3e-16 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 4e-04 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 5e-11 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 1e-10 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 1e-10 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 1e-05 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 1e-04 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 2e-04 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 2e-04 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 4e-04 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 8e-04 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 736 bits (1903), Expect = 0.0
Identities = 395/552 (71%), Positives = 457/552 (82%), Gaps = 1/552 (0%)
Query: 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
S+ RHYKWEVEYMFW+P+C E+IVMGINGQFPGPTIRA AGD++ VELTNKL+TEGVVIH
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLI 148
WHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLYGSLI
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLI 120
Query: 149 VDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 208
VD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRGQF+C
Sbjct: 121 VDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC 180
Query: 209 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268
S+AA + + + E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH+++VV
Sbjct: 181 SIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239
Query: 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328
EADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY
Sbjct: 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYL 299
Query: 329 PTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 388
P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR+ LLNTQN ING+
Sbjct: 300 PNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359
Query: 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 448
KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ PP N T +G+GVY
Sbjct: 360 VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVY 419
Query: 449 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508
+ VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+ E+E NLKNPPL
Sbjct: 420 QFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479
Query: 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 568
+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG
Sbjct: 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACG 539
Query: 569 LTGKRFMNPKQN 580
T K +N +N
Sbjct: 540 GTAKSLINNPKN 551
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 143/551 (25%), Positives = 217/551 (39%), Gaps = 74/551 (13%)
Query: 30 KTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
+T + W + + + D K V+ NGQFP P I GD + + LTN + +H
Sbjct: 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMH 60
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK-AGTYFYHGHLGMQRSAGLYGSL 147
+HG+ Q GT DG ++QCPI PG T LY F VD GTY+YH H Q G+ G
Sbjct: 61 FHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLF 120
Query: 148 IVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR--PLRWIGEPQTLLINGRGQ 205
I+ + P+ YD E +L LS+W+H V + S P PQ L++N
Sbjct: 121 II---KDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN 177
Query: 206 FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265
VQP+ TY LRI + S +++H+M
Sbjct: 178 LTWE---------------------------VQPDTTYLLRIVNVGGFVSQYFWIEDHEM 210
Query: 266 VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLL 325
VVE DG + D + I + Y+VL+ T D N+ I P+
Sbjct: 211 TVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPS---- 266
Query: 326 NYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL-MGSPKPPTNFHRRLTL-LNTQN 383
+ + S + + P + D +F + + +T+ + N
Sbjct: 267 DLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDN 326
Query: 384 TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL 443
NG NN++ T P P L ++ A + N
Sbjct: 327 LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSN------------------ 368
Query: 444 GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE------- 496
+ ++L + V+++L N + HP+HLHGH F + R
Sbjct: 369 -THTFILEKDEIVEIVLNNQDT------GTHPFHLHGHAFQTIQRDRTYDDALGEVPHSF 421
Query: 497 --DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554
D + P ++T + P +RF ADNPG W FHCHIE H G+G+VL
Sbjct: 422 DPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP 481
Query: 555 ETVGNIPNQAL 565
+ + +Q L
Sbjct: 482 FGIQDAHSQQL 492
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 514 bits (1327), Expect = e-179
Identities = 144/563 (25%), Positives = 211/563 (37%), Gaps = 81/563 (14%)
Query: 16 ILMLCSVFETSYGSKTRHYKWEVEYMFWSPD-CKESIVMGINGQFPGPTIRARAGDTIAV 74
L++ S+ S T + PD + G P I D +
Sbjct: 9 SLVVLSLTSLSLA-ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQI 67
Query: 75 ELTNKLYT----EGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTY 129
+ ++L IHWHG Q GT DG A ++QCPI P E+++Y F V +AGTY
Sbjct: 68 NVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTY 127
Query: 130 FYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSR 187
+YH HL Q GL G+ +V D D + D + ++DW+H L
Sbjct: 128 WYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV----LFPN 183
Query: 188 PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRI 247
P + P T LING G+ + + +A ++ VQ K YR RI
Sbjct: 184 PNKAPPAPDTTLINGLGRNSANPSAG-----------------QLAVVSVQSGKRYRFRI 226
Query: 248 ASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 307
ST+ + ++ H+M V+E DG QP VD + I++G+ YSV++ NQ NYWI
Sbjct: 227 VSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWI 285
Query: 308 SAGVRGRKPATPPALT--LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS 365
A + + + Y + ++ S T + G+
Sbjct: 286 RANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIP-------LINPGA 338
Query: 366 PKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPEN 425
P P + L + IN P P L I G+ + D
Sbjct: 339 PGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPND------- 391
Query: 426 FSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 485
G V L N +++ + HP+HLHGH+F V
Sbjct: 392 ---------------LLPGGAVISLPANQVIEISIPGGGN--------HPFHLHGHNFDV 428
Query: 486 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHI 544
+ +N NP ++ I G RFV DNPG W HCHI+ H
Sbjct: 429 VRTP-------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEA 481
Query: 545 GMGVVLALGVETVGNIPNQALAC 567
G+ VV E + NIP
Sbjct: 482 GLAVVF---AEDIPNIPIANAIS 501
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 511 bits (1317), Expect = e-178
Identities = 142/544 (26%), Positives = 213/544 (39%), Gaps = 81/544 (14%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL----YTEGVV 86
+ SPD + +NG PGP + GD + + + L +
Sbjct: 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTS 62
Query: 87 IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYG 145
IHWHG Q GT WADG A I+QCPI+PG ++LY F+V D+AGT++YH HL Q GL G
Sbjct: 63 IHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRG 122
Query: 146 SLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR 203
+V D D + D + + L+DW+H + + R+ G LING+
Sbjct: 123 PFVVYDPNDPHASRYDVDNDDTVITLADWYHTA--------AKLGPRFPGGADATLINGK 174
Query: 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263
G+ A S + V K YR R+ S + + ++ H
Sbjct: 175 GRAPSDSVAELSV------------------IKVTKGKRYRFRLVSLSCNPNHTFSIDGH 216
Query: 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT 323
+ ++E D QP EVD + I++ + YS +L NQ NYWI A +
Sbjct: 217 NLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVGFDGGIN 275
Query: 324 L--LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL-LN 380
L Y A + + ++ D + L+ +P P + +N
Sbjct: 276 SAILRYDGAPAVEPTTNQTTSVKPLNEVD--------LHPLVSTPVPGAPSSGGVDKAIN 327
Query: 381 TQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNAN 440
NG + + IN S P P L I G + A D + +
Sbjct: 328 MAFNFNG-SNFFINGASFVPPTVPVLLQILSGAQTAQD----------------LLPSGS 370
Query: 441 TTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKK 500
VY+L N ++++ A HP+HLHGH F V+
Sbjct: 371 ------VYVLPSNASIEISFPATAAAPG---APHPFHLHGHTFAVVRSA-------GSTV 414
Query: 501 FNLKNPPLKNTAVIF---PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 557
+N NP ++ +RF +NPG W HCHI+ H G VV+A V
Sbjct: 415 YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDV 474
Query: 558 GNIP 561
+
Sbjct: 475 KAVN 478
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 513 bits (1324), Expect = e-177
Identities = 140/533 (26%), Positives = 207/533 (38%), Gaps = 56/533 (10%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
TR Y VE +PD M NG PGP I A GD + + +TN L G IHW
Sbjct: 66 VTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHW 125
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
HGIRQLG+ DG ++QCPI PG+T Y+F+V + GT +YH H +Q GL+G LI+
Sbjct: 126 HGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLII 185
Query: 150 DVADGEKEPFHYDGEFN-LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNC 208
+ YD + + L DW H SV E + L + L+NG F+C
Sbjct: 186 N----GPATADYDEDVGVIFLQDWAHESVFEI---WDTARLGAPPALENTLMNGTNTFDC 238
Query: 209 SLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268
S + + + L YRLR+ + + A+ NH + V+
Sbjct: 239 SASTDPNCVGGGK----------KFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVI 288
Query: 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL---L 325
D + P+ D + I G+ Y V++ N NYWI A L
Sbjct: 289 ANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGIL 347
Query: 326 NYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI 385
Y +S + +D + + L +
Sbjct: 348 RYDSSSIANPTSVGTTPRGTCEDEPVAS---------LVPHLALDVGGYSLVDEQVSSAF 398
Query: 386 NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGS 445
+ W IN+ SL L + F+ N + + N
Sbjct: 399 TNYFTWTINSSSLLLDWSSPT------TLKIFNNETIFPTEYNVVALEQTNAN------- 445
Query: 446 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEKKFNLK 504
V ++++ HP HLHGHDF+++ + F E KFNL
Sbjct: 446 -------EEWVVYVIEDLTG----FGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLV 494
Query: 505 NPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 557
NPP ++ A + G+ A+ F DNPG+W HCHI H G+ + ++
Sbjct: 495 NPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSI 547
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 505 bits (1303), Expect = e-175
Identities = 141/541 (26%), Positives = 200/541 (36%), Gaps = 75/541 (13%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE----GVV 86
+ PD + G FPGP I GD + N+L
Sbjct: 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTS 63
Query: 87 IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYG 145
IHWHG Q GT WADG A I+QCPI G ++ Y F V AGTY+YH HL Q GL G
Sbjct: 64 IHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRG 123
Query: 146 SLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR 203
+V D D + + D + L+DW+H E G + + LI+G
Sbjct: 124 PFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAITA-------DSTLIDGL 176
Query: 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263
G+ + ++AA ++ V+ K YR+R+ S + + + ++ H
Sbjct: 177 GRTHVNVAA-----------------VPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGH 219
Query: 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT 323
M ++E DG Q VD++ I++ + YS +L NQ NYWI A +
Sbjct: 220 DMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEGFDGGIN 278
Query: 324 LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN 383
A+ T + + G P P L +
Sbjct: 279 SAILRYDGATTADPVTVASTVHTKCLIETDLHP---LSRNGVPGNPHQGGADCNLNLSLG 335
Query: 384 TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTL 443
+ IN VS T P P L I G A D P +
Sbjct: 336 --FACGNFVINGVSFTPPTVPVLLQICSGANTAADL-LPSGS------------------ 374
Query: 444 GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNL 503
V L N+T+++ L A HP+HLHGHDF V N
Sbjct: 375 ---VISLPSNSTIEIALPAGAA-----GGPHPFHLHGHDFAVSESA-------SNSTSNY 419
Query: 504 KNPPLKNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPN 562
+P ++ I +RF DNPG W HCHI+ H G +V E + N +
Sbjct: 420 DDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF---AEDIPNTAS 476
Query: 563 Q 563
Sbjct: 477 A 477
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 497 bits (1281), Expect = e-172
Identities = 145/547 (26%), Positives = 218/547 (39%), Gaps = 88/547 (16%)
Query: 31 TRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL----YTEGVV 86
+ SPD + +NG GP IR D + + N L
Sbjct: 4 NSVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTS 62
Query: 87 IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYG 145
IHWHG+ Q GT WADG ++QCPI+PG +LY+F AGT++YH H G Q GL G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRG 122
Query: 146 SLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR 203
+++ D D + D + L+DW+H ++ +P LING+
Sbjct: 123 PMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPS---------IQGAAQPDATLINGK 173
Query: 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263
G++ AA S I++V+ K YR+R+ S + + ++ H
Sbjct: 174 GRYVGGPAAELS------------------IVNVEQGKKYRMRLISLSCDPNWQFSIDGH 215
Query: 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT 323
++ ++E DG +P VD + I++G+ YS +L NQ NYWI A +
Sbjct: 216 ELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFA 274
Query: 324 ------LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLT 377
+L Y + + S P + ++ D A G P P
Sbjct: 275 NGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDP---AAPGIPTPGAADVN--- 328
Query: 378 LLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPV 437
L Q +G ++ IN + P P L I G + A D
Sbjct: 329 -LRFQLGFSG-GRFTINGTAYESPSVPTLLQIMSGAQSAND----------------LLP 370
Query: 438 NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 497
+ VY L N V++++ L HP+HLHGH F V+
Sbjct: 371 AGS------VYELPRNQVVELVVPAG-----VLGGPHPFHLHGHAFSVVRSA-------G 412
Query: 498 EKKFNLKNPPLKNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVET 556
+N NP ++ + G +RFV DNPG W FHCHIE H G+ +V E
Sbjct: 413 SSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF---AED 469
Query: 557 VGNIPNQ 563
+ N +
Sbjct: 470 MANTVDA 476
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 493 bits (1271), Expect = e-170
Identities = 130/565 (23%), Positives = 210/565 (37%), Gaps = 82/565 (14%)
Query: 23 FETSYGSKTRHYKWEVEYM--FWSPD-CKESIVMGINGQFPGPTIRARAGDTIAVELTNK 79
T T+ Y + + + + PD + VM ING GP I A GDT+ V + N
Sbjct: 25 VSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINN 84
Query: 80 LYTEGVVIHWHGIRQLGTPWADGTASISQCPINP-GETYLYRFKVDKAGTYFYHGHLGMQ 138
L T G IHWHGI Q T DG +++CPI P G YR++ + GT +YH H Q
Sbjct: 85 LVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQ 144
Query: 139 RSAGLYGSLIVDVADGEKEPFHYDGEFN-LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 197
G+ G++ ++ YD + ++D+++R+ + + +
Sbjct: 145 YGNGVVGTIQIN----GPASLPYDIDLGVFPITDYYYRAADDLVHFTQNNAPPF---SDN 197
Query: 198 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN 257
+LING + ++N + + P K +RLRI +T+
Sbjct: 198 VLINGTAVNPNTGEGQYAN------------------VTLTPGKRHRLRILNTSTENHFQ 239
Query: 258 LAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA 317
+++ NH M V+ AD V VD + + G+ Y V++ ++ P NYW + G+
Sbjct: 240 VSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAAC 298
Query: 318 TPP----ALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 373
+ +Y P DH + + ++ P +F
Sbjct: 299 GGSLNPHPAAIFHYAGAPGG------LPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352
Query: 374 RRLT---LLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEY 430
+R + T W +N + + + ++ +
Sbjct: 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVD 412
Query: 431 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE 490
T +I + HP HLHGHDF VLGR
Sbjct: 413 ----------------------QWTYWLIENDPEGPFS---LPHPMHLHGHDFLVLGRSP 447
Query: 491 GKFT----------KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 540
D + N NPP ++T ++ GW L F DNPGAW FHCHI
Sbjct: 448 DVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAW 507
Query: 541 HFHIGMGVVLALGVETVGNIPNQAL 565
H G+ V +E ++ +
Sbjct: 508 HVSGGLSVDF---LERPADLRQRIS 529
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 1e-82
Identities = 75/350 (21%), Positives = 119/350 (34%), Gaps = 46/350 (13%)
Query: 30 KTRHYKWEVEYMFWSPDCKESI-VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
+ R + +E K NGQ P P I GD + V +TN T IH
Sbjct: 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMT-TLPHTIH 59
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSA---GLYG 145
WHG+ Q GT +DG +Q I PG+T+ Y+FK + AGT +YH H+ + G++G
Sbjct: 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWG 119
Query: 146 SLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQ 205
LIV+ + ++ L+LSDW ++ G + IN +
Sbjct: 120 PLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKPGEGGIPGDV-----FDYYTINAKSF 174
Query: 206 FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265
+ V+ RLR+ + H
Sbjct: 175 PETQ------------------------PIRVKKGDVIRLRLIG-AGDHVHAIHTHGHIS 209
Query: 266 VVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYW-----ISAGVRGRKPATP 319
+ DG + +P + D + I GE Y V+L + W +
Sbjct: 210 QIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP---GLWMIHDHVDTHTTNGDKPDG 266
Query: 320 PALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPP 369
+T + Y P D+ + +S K + S
Sbjct: 267 GIMTTIEYEEVGIDH-PFYVWKDKKFVPDFYYEESL-KKDLGMHNSKVFK 314
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 4e-08
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 473 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 532
+H H HGH + + +G F L P +T +I P + DNPG W
Sbjct: 199 VHAIHTHGHISQIAFK-DG---------FPLDKPIKGDTVLIGPGERYDVILNMDNPGLW 248
Query: 533 AFHCHIEPHFHIGMG 547
H H++ H G
Sbjct: 249 MIHDHVDTHTTNGDK 263
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 2e-79
Identities = 70/321 (21%), Positives = 117/321 (36%), Gaps = 44/321 (13%)
Query: 31 TRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
R + +E + + V G NGQ PGP I + GD + V +TN + IHW
Sbjct: 3 EREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNT-SLPHTIHW 61
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR---SAGLYGS 146
HG+ Q GT +DG ++Q PI G++Y Y+FK D+ GT +YH H+ + G++G
Sbjct: 62 HGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGP 121
Query: 147 LIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQF 206
LIVD + +++S W + +N F
Sbjct: 122 LIVDPKQPLPIEKRVTKDVIMMMSTWESAVADKY-------------GEGGTPMNVADYF 168
Query: 207 NCSLAAHFSNGSAEQCKLRGNEQCAPQI--LHVQPNKTYRLRIASTTALASLNLAVKNHK 264
+ N + P L V+ ++R + H
Sbjct: 169 SV------------------NAKSFPLTQPLRVKKGDVVKIRFFG-AGGGIHAMHSHGHD 209
Query: 265 MVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYW---ISAGVRGRKPATPP 320
M+V DG + P+ D + + GE Y V++ + P + + V
Sbjct: 210 MLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGG 268
Query: 321 ALTLLNYHPTSASKIPLSPPP 341
+T++ Y +
Sbjct: 269 PITVIEYDGVPVDDWYVWKDK 289
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 473 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 532
IH H HGHD V + +G L +P +T ++ P + ADNPG +
Sbjct: 200 IHAMHSHGHDMLVTHK-DG---------LPLDSPYYADTVLVSPGERYDVIIEADNPGRF 249
Query: 533 AFHCHIEPHFHIGMG 547
FH H++ H G
Sbjct: 250 IFHDHVDTHVTAGGK 264
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 6e-77
Identities = 105/528 (19%), Positives = 172/528 (32%), Gaps = 113/528 (21%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
K + + + ++ G FPGPT+R R DT+ + L N+L E +HW
Sbjct: 15 GLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRL-PEPTNLHW 73
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKV--DKAGTYFYHGHL----GMQRSAGL 143
HG+ +P D I PGE++ Y F V + AGT++YH HL Q AGL
Sbjct: 74 HGLPI--SPKVDDP----FLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGL 127
Query: 144 YGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR 203
G+L+V+ + E L+L D + G+ +L+NG
Sbjct: 128 LGALVVESSLDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGD--LVLVNGA 185
Query: 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263
+ P + V T RLR+ + + LA+++H
Sbjct: 186 LR--------------------------PTL--VAQKATLRLRLLNASNARYYRLALQDH 217
Query: 264 KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPAL 322
+ ++ ADG ++ +P EV ++ + GE VL+ ++ + + A R +
Sbjct: 218 PLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKEG--RFLLQALPYDRGAMGMMDM 275
Query: 323 TLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ 382
+ + P + + + + F + +P ++ +
Sbjct: 276 GGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTEDMMAAR 335
Query: 383 NTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT 442
ING FD
Sbjct: 336 FFING---------------------------QVFDHRRVDL------------------ 350
Query: 443 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFN 502
T ++N + HP+HLH H F VL G G+
Sbjct: 351 ------KGQAQTVEVWEVENQGDM------DHPFHLHVHPFQVLSVG-GR---------P 388
Query: 503 LKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
K+ + L G FHCHI H GM VL
Sbjct: 389 FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVL 436
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 227 bits (579), Expect = 7e-68
Identities = 99/502 (19%), Positives = 169/502 (33%), Gaps = 107/502 (21%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
NG P P I GD + + + NKL E IHWHG+ DG+ PI
Sbjct: 72 FYTYNGLVPAPKIEVFEGDKLEILVKNKL-KEATTIHWHGVPVPPD--QDGSP---HDPI 125
Query: 112 NPGETYLYRFKVDK--AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEF 165
GE +YRF++ + AGTY+YH H Q GL G+ ++ +K+ + E
Sbjct: 126 LAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVI---KAKKDALSHLKEK 182
Query: 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLR 225
+L++SD Q + E + +LING+ +
Sbjct: 183 DLMISDLRLDENA-QIPNNNLNDWLNGREGEFVLINGQFK-------------------- 221
Query: 226 GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMD 284
++ R+RI + TA LNL ++ K ++V DG + + +++
Sbjct: 222 ---------PKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELF 272
Query: 285 IYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITP 344
+ VL+ +D ++ + R + TL + + P +
Sbjct: 273 LSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKI 332
Query: 345 RWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTP 404
S K F + + H + + I + + IN
Sbjct: 333 F------KPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRK-------- 378
Query: 405 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN 464
++D + L D I+ N +
Sbjct: 379 -----------SYDLKRIDLS------------------------SKLGVVEDWIVINKS 403
Query: 465 AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 524
+ HP+H+HG F ++ + K + L++T + P LR
Sbjct: 404 HM------DHPFHIHGTQFELISSK------LNGKVQKAEFRALRDTINVRPNEELRLRM 451
Query: 525 VADNPGAWAFHCHIEPHFHIGM 546
D G +HCHI H +GM
Sbjct: 452 KQDFKGLRMYHCHILEHEDLGM 473
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 8e-63
Identities = 86/541 (15%), Positives = 146/541 (26%), Gaps = 128/541 (23%)
Query: 28 GSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGV 85
G + +Y+ E++ PD + ++G +G PGPT + G V N
Sbjct: 33 GQEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNA-EAPN 91
Query: 86 VIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK-AGTYFYHGHL----GMQRS 140
+H HG DG A + PG Y + + A T +YH H
Sbjct: 92 SVHLHGSFS--RAAFDGWA---EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAY 146
Query: 141 AGLYGSLIVDVADGEKEPFHYDG-----EFNLLLSDWWHRSVHEQEVGLSSRPLRWIG-E 194
G G ++ D ++ + + ++L+ + + L +
Sbjct: 147 RGQAGLYMLT--DPAEDALNLPSGYGEFDIPMILTSKQYTANGN----LVTTNGELNSFW 200
Query: 195 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA 254
+ +NG+ P + YR R
Sbjct: 201 GDVIHVNGQ----------------------------PWPFKNVEPRKYRFRFLDAAVSR 232
Query: 255 SLNLAVKNH-------KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 306
S L + V+ +D + P + + I E Y V+ +
Sbjct: 233 SFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIE 292
Query: 307 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 366
+ ++ + + + + D S +N SP
Sbjct: 293 LR--------NLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPSP 344
Query: 367 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 426
T R TING
Sbjct: 345 TTNTPRQFRFGRTGPTWTINGVA------------------------------------- 367
Query: 427 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 486
+ ++ + AN +G T L NA HP H+H DF V+
Sbjct: 368 ---FADVQNRLLANVPVG---------TVERWELINAGNGWT-----HPIHIHLVDFKVI 410
Query: 487 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR-FVADNPGAWAFHCHIEPHFHIG 545
R G + + LK+ + + A PG + FHCH H
Sbjct: 411 SRTSG----NNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHD 466
Query: 546 M 546
M
Sbjct: 467 M 467
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 6e-61
Identities = 98/520 (18%), Positives = 160/520 (30%), Gaps = 120/520 (23%)
Query: 52 VMGINGQ-FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCP 110
G + PTI R G + + L NKL TE ++HWHG D
Sbjct: 27 ASGYMAEGVLNPTIILRRGQRVDMTLKNKL-TEPTIVHWHGFDV--NWHNDAHP---SFA 80
Query: 111 INPGETYLYRFKV-DKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYD-GE 164
I PGE+Y Y F V ++AGTY YH H Q G G +IV+ G F Y +
Sbjct: 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVE-DSGSDLGFKYGVND 139
Query: 165 FNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKL 224
L++SD + + +L+NG
Sbjct: 140 LPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGV--------------------- 177
Query: 225 RGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK-----MVVVEADGNYV-QPF 278
+ +YRLR+ + + L++ M ++ D ++ +P
Sbjct: 178 -------KDAVFKLSGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPI 230
Query: 279 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLS 338
EV + + E V++ + Y + TP L +P
Sbjct: 231 EVRALFLAPAERAEVVVELGEG---VYLLK--------NTPFDPMHLEMGHGMQEALPEG 279
Query: 339 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSL 398
+ ++ + + P RR L +W IN +
Sbjct: 280 SEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFAL------SLSGMQWTINGM-- 331
Query: 399 TLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDV 458
++ P+ + ++
Sbjct: 332 -----------------FWN--------------ASNPLFEHVSVE---------GVELW 351
Query: 459 ILQNANAIRPNLSEIHPWHLHGHDFWVLGR----GEGKFTKEDEKKFNLKNPPLKNTAVI 514
+ N A P HP HLHG W++ R + D + + LK+T +I
Sbjct: 352 EIVNDKASMP-----HPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLI 406
Query: 515 FPYGWT--ALRFVADNP-GAWAFHCHIEPHFHIGMGVVLA 551
+P + F A + FHCH H GM + +A
Sbjct: 407 WPGETVKIVVNFDAKKRGQLFPFHCHNLEHEDGGMMINIA 446
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 204 bits (519), Expect = 3e-59
Identities = 94/537 (17%), Positives = 167/537 (31%), Gaps = 90/537 (16%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
+ + + K + G NG GP ++ + G + V++ N+L TE +HW
Sbjct: 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQL-TEETTLHW 74
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHL----GMQRSAGLY 144
HG+ G DG Q I PG V A T ++H H G Q + GL
Sbjct: 75 HGLEVPGE--VDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLA 129
Query: 145 GSLIVDVADGEKEPFHYDG-----EFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLL 199
G ++++ D E + +++ D + + + L TLL
Sbjct: 130 GLVVIE--DDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLL 187
Query: 200 INGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259
NG H P RLR+ + SLN A
Sbjct: 188 TNGA----------------------------IYPQHAAPRGWLRLRLLNGCNARSLNFA 219
Query: 260 VKN-HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSY-----NYWISAGVR 312
+ + V+ +DG + +P +V ++ + GE + VL+ N + +
Sbjct: 220 TSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAI 279
Query: 313 GRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNF 372
P + + +++ +P + + + + + L P
Sbjct: 280 APFDKPHPVMRIQPIAISASGALPDTLSSLPA----LPSLEGLTVRKLQLSMDPMLDMMG 335
Query: 373 HRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV 432
+ L + G + K+ A NG +D+
Sbjct: 336 MQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA------FDM 389
Query: 433 MKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGK 492
KP ++ ++ + HP+H+HG F +L
Sbjct: 390 NKP-----------MFAAAKGQYERWVISGVGDMML-----HPFHIHGTQFRILSENGKP 433
Query: 493 FTKEDEKKFNLKNPPLKNTAVIFPYGWTAL-RFVADNP--GAWAFHCHIEPHFHIGM 546
K+T + L +F D P A+ HCH+ H GM
Sbjct: 434 PAAHR--------AGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGM 482
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 5e-48
Identities = 75/509 (14%), Positives = 137/509 (26%), Gaps = 129/509 (25%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
V GING++ GPTIR GD + + +N+L TE V + G++ G G +
Sbjct: 40 VWGINGRYLGPTIRVWKGDDVKLIYSNRL-TENVSMTVAGLQVPGP--LMGGP---ARMM 93
Query: 112 NPGETYLYRFKVDK-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDG--- 163
+P + + + A T +YH + Q GL G +V+ D +
Sbjct: 94 SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVE--DEVSKSLPIPNHYG 151
Query: 164 --EFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ 221
+F +++ D + E TLL+NG
Sbjct: 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFV---GDTLLVNG------------------- 189
Query: 222 CKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-HKMVVVEADGNYV-QPFE 279
+P + V RLR+ + + L + + + V+ D ++ P
Sbjct: 190 -------VQSPYV-EVSRGW-VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVS 240
Query: 280 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSP 339
V + + GE +L+ + + S I +S
Sbjct: 241 VKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFF---------EPSSILVST 291
Query: 340 PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLT 399
+T R + S + L + R L ING
Sbjct: 292 LVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGDDPGING------------ 339
Query: 400 LPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 459
+D N T
Sbjct: 340 ---------------QLWDVNRIDVT------------------------AQQGTWERWT 360
Query: 460 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGW 519
++ +H+ G F + + ++ K+T +
Sbjct: 361 VRADEP--------QAFHIEGVMFQIRNV--------NGAMPFPEDRGWKDTVWVDGQVE 404
Query: 520 TALRF--VADNPGAWAFHCHIEPHFHIGM 546
+ F + + F+ G
Sbjct: 405 LLVYFGQPSWAHFPFYFNSQTLEMADRGS 433
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 3e-47
Identities = 50/277 (18%), Positives = 87/277 (31%), Gaps = 50/277 (18%)
Query: 28 GSKTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVV 86
G R + + NG+ PGPT+ AR GD + + TN
Sbjct: 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAG-AHPHT 89
Query: 87 IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH---LGMQRSAGL 143
IH+HG+ + DGT I I PG+++ Y F GT+ YH H L + GL
Sbjct: 90 IHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGL 146
Query: 144 YGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR 203
YG IV+ +G D E ++++ + + + +NG
Sbjct: 147 YGGFIVEPKEGRPP---ADDEMVMVMNGYNT---------------DGGDDNEFYSVNGL 188
Query: 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN-LAVKN 262
+ V+ ++ R+ + + +N +
Sbjct: 189 -----------------------PFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHG 225
Query: 263 HKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ 299
+ D + G+ + L
Sbjct: 226 NFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY 262
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 6e-11
Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 13/83 (15%)
Query: 464 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR 523
N + + I+ +H+HG+ F G L +T L
Sbjct: 211 NVLEYD--PINSFHIHGNFFHYYPTG-----------TMLTPSEYTDTISQVQGQRGILE 257
Query: 524 FVADNPGAWAFHCHIEPHFHIGM 546
PG + FH H +G
Sbjct: 258 LRFPYPGKFMFHAHKTEFAELGW 280
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 14/107 (13%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGV-VIHWHGIR--------QLGTPWADG 102
V G+ F ++ + + + + L N L + + H HG L
Sbjct: 185 VNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTD 244
Query: 103 TASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
T S G+ + + G + +H H G G V
Sbjct: 245 TISQV-----QGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEV 286
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 167 bits (423), Expect = 2e-45
Identities = 86/547 (15%), Positives = 144/547 (26%), Gaps = 126/547 (23%)
Query: 43 WSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL---------------------Y 81
D + + G NG FPGPTI + + + V+ N L
Sbjct: 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 98
Query: 82 TEGVVIHWHGIRQLGTPWADGTASISQCPINPGETY---LYRFKVDK-AGTYFYHGHL-- 135
V+H HG A S+ G + +Y + + +YH H
Sbjct: 99 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMA 158
Query: 136 --GMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWI 192
+ AGL G+ I+ D + + + + LL++D S+
Sbjct: 159 LTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINE-DGSLFYPSAPENPSP 217
Query: 193 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA 252
P ++ L NG + P + + YR R+ + +
Sbjct: 218 SLPNPSIVPAF-CGETILV----NG-----------KVWPYL--EVEPRKYRFRVINASN 259
Query: 253 LASLNLAVKN-HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 310
+ NL++ N + + +DG + + +++ + E Y +++ I A
Sbjct: 260 TRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEG-ESIILAN 318
Query: 311 VRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPT 370
G P + P K A S +
Sbjct: 319 SAGCGGDVNPETDANIMQFRVTKPLAQKDESRKP-------------KYLASYPSVQHER 365
Query: 371 NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEY 430
+ R L G +NN
Sbjct: 366 IQNIRTLKLAGTQDEYGRPVLLLNNKR--------------------------------- 392
Query: 431 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE 490
PV +G+ +N T HP HLH F VL R
Sbjct: 393 --WHDPVTETPKVGTTEIWSIINPTRGT---------------HPIHLHLVSFRVLDRRP 435
Query: 491 GKFTKEDEKKFNLKNPP----------LKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIE 539
+ E P K+T + G + +HCH
Sbjct: 436 FDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495
Query: 540 PHFHIGM 546
H M
Sbjct: 496 EHEDYDM 502
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 138 bits (348), Expect = 1e-35
Identities = 46/253 (18%), Positives = 79/253 (31%), Gaps = 37/253 (14%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTE-GVVIHWHGIRQLGTPWADGTASISQCP 110
PG IR R GD I L+N ++ I H +
Sbjct: 50 FWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGGAESSF 102
Query: 111 INPGETYLYRFKVDKAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEFNL 167
PG T + FK G Y YH + G+YG ++V+ +G D E+ L
Sbjct: 103 TAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAP---VDREYYL 159
Query: 168 LLSDWWHRSVHEQEVGLSSRPLRWIGE-PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 226
+ D++ + + + I E ++ NG ++ ++
Sbjct: 160 VQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGS-------VGSTTDENS------- 205
Query: 227 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIY 286
L + +T RL I + + V V +G ++ V I
Sbjct: 206 --------LTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIP 257
Query: 287 SGESYSVLLTTNQ 299
+G + V
Sbjct: 258 AGGAAIVEFKVEV 270
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 20/123 (16%)
Query: 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 514
TV + + N + +H+ G F + EG T +I
Sbjct: 213 TVRLYIGNGGPNL-----VSSFHVIGEIFDTVYV-EG----------GSLKNHNVQTTLI 256
Query: 515 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRF 574
G + F + PG + H AL + V + ++ G T +
Sbjct: 257 PAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG----ALAMLKVEGPDDHSIFTGKTAENV 312
Query: 575 MNP 577
P
Sbjct: 313 YLP 315
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 47/252 (18%), Positives = 83/252 (32%), Gaps = 35/252 (13%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
+G PG IR R GDT+ VE +N + H + G A+ +
Sbjct: 60 YWTFDGDVPGRMIRVREGDTVEVEFSNNPSS----TVPHNVDFHAATGQGGGAAATF--T 113
Query: 112 NPGETYLYRFKVDKAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEFNLL 168
PG T + FK + G Y YH + + G+YG ++V+ +G D EF ++
Sbjct: 114 APGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP---KVDKEFYIV 170
Query: 169 LSDWW-HRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGN 227
D++ Q + +P+ ++ NG
Sbjct: 171 QGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNG----------------------HVG 208
Query: 228 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYS 287
L + +T R+ + + + V V +G + V + +
Sbjct: 209 ALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPA 268
Query: 288 GESYSVLLTTNQ 299
G S V +
Sbjct: 269 GGSAIVEFKVDI 280
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 18/104 (17%)
Query: 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 514
TV + + N PN + +H+ G F + GK + ++
Sbjct: 223 TVRMYVGNG---GPN--LVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIV 266
Query: 515 FPYGWTALRFVADNPGAWAFHCHIEPHFHI--GMGVVLALGVET 556
G + F D PG + H +G + G E
Sbjct: 267 PAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-31
Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 29/168 (17%)
Query: 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVI 87
G + RH K E + + PGP I GDT+ +E TN + +
Sbjct: 4 GGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASL 60
Query: 88 HWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK-------------AGTYFYHGH 134
H HG+ +DG ++++ + PG T Y ++ K AG + YH H
Sbjct: 61 HVHGLDY--EISSDG-TAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDH 117
Query: 135 LGMQR------SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRS 176
+ GLYG +IV K D ++ +D +
Sbjct: 118 VVGTEHGTGGIRNGLYGPVIVR----RKGDVLPDATHTIVFNDMTINN 161
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 9e-12
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 11/120 (9%)
Query: 430 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489
D V + T+ + G + V + + + H +H+HGH + G
Sbjct: 146 PDATHTIVFNDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG 205
Query: 490 EGKFTKEDEKKFNLKNPPLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGM 546
+ + + P +G+ + GAW +HCH++ H +GM
Sbjct: 206 ILTG--------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGM 257
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-30
Identities = 70/544 (12%), Positives = 139/544 (25%), Gaps = 102/544 (18%)
Query: 55 INGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQL----GTPWADGT--ASISQ 108
+ F GP I+A GD + V L N + H HGI G + D T +
Sbjct: 88 VWLGFLGPIIKAETGDKVYVHLKNLA-SRPYTFHSHGITYYKEHEGAIYPDNTTDFQRAD 146
Query: 109 CPINPGETYLYRFKVDKAG----------TYFYHGHLGM--QRSAGLYGSLIVDVAD--G 154
+ PGE Y Y + T YH H+ ++GL G LI+ D
Sbjct: 147 DKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLD 206
Query: 155 EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 214
+++ H D EF ++ S E + + + + S+
Sbjct: 207 KEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSV---- 262
Query: 215 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 274
NG + L + + + + G
Sbjct: 263 -NGYTF---------GSLSGLSMCAEDRVKWYLFGMGN---------EVDVHAAFFHGQA 303
Query: 275 V--QPFEVDDMDIYSGESYSVLLTTNQDPSY------NYWISAGVRGRKPATPPALTLLN 326
+ + + +D ++++ + + + + AG++ +
Sbjct: 304 LTNKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSK 363
Query: 327 YHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN 386
+ W+ ++ + T
Sbjct: 364 DNIRGKHVRHYYIAAEEIIWN-------YAPSGIDIFTKENLTAPGSDSAVFFEQGTTRI 416
Query: 387 GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG 446
G + + T +F ++ P + A
Sbjct: 417 GGSYKKLVYREYTD--------------ASFTNRKERGPEEEHLGILGPVIWAEV----- 457
Query: 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 506
T+ V N + G F G ++
Sbjct: 458 ------GDTIRVTFHN------KGAYPLSIEPIGVRFNKNNEGT---YYSPNYNPQSRSV 502
Query: 507 PLKNTAVI----FPYGWTALRFVADNPGA-----WAFHCHIEPHFHIGMGVVLALGVETV 557
P + V F Y WT + V ++ ++P I G++ + +
Sbjct: 503 PPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKK 562
Query: 558 GNIP 561
G++
Sbjct: 563 GSLH 566
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 2e-23
Identities = 45/265 (16%), Positives = 75/265 (28%), Gaps = 43/265 (16%)
Query: 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
E + GP + A GD + + N T IH HG++ + +
Sbjct: 796 VERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQTESS---------T 845
Query: 108 QCPINPGETYLYRFKVDK----------AGTYFYHGH--LGMQRSAGLYGSLIVDVADG- 154
P PGET Y +K+ + + Y+ +GL G LIV
Sbjct: 846 VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL 905
Query: 155 EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHF 214
+ EF LL + E E ++ + + +F S H
Sbjct: 906 KVFNPRRKLEFALLFLVF-----DENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHA 960
Query: 215 SNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN-LAVKNHKMVVVEADGN 273
NG Q L + + L+ + H
Sbjct: 961 INGRMF---------GNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG-- 1009
Query: 274 YVQPFEVDDMDIYSGESYSVLLTTN 298
+ D DI+ G ++ +
Sbjct: 1010 ---VYSSDVFDIFPGTYQTLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 86.6 bits (213), Expect = 9e-18
Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 28/168 (16%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
K Y+ + F + + + GP I A GDTI V NK + I
Sbjct: 421 KKLVYREYTDASFTNRKERGPEEE--HLGILGPVIWAEVGDTIRVTFHNKGA-YPLSIEP 477
Query: 90 HGIR----------QLGTPWADGTASISQCPINPGETYLYRFKVDKAG----------TY 129
G+R + S + P ET+ Y + V K
Sbjct: 478 IGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAK 537
Query: 130 FYHGHLGMQR--SAGLYGSLIVD---VADGEKEPFHYDGEFNLLLSDW 172
Y+ + + GL G + + D EF L + +
Sbjct: 538 MYYSAVDPTKDIFTGLIGPMKICKKGSLHANGRQKDVDKEFYLFPTVF 585
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 82.3 bits (202), Expect = 2e-16
Identities = 69/562 (12%), Positives = 127/562 (22%), Gaps = 91/562 (16%)
Query: 15 WILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESI-----VMGINGQFPG--PTIRAR 67
+++M V E + K E + +NG G +
Sbjct: 217 FVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFGSLSGLSMC 276
Query: 68 AGDTIAVELTNKLYTEGV-VIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126
A D + L V +HG + T ++ P +
Sbjct: 277 AEDRVKWYLFGMGNEVDVHAAFFHGQALTNKNYRIDTINLF-----PATLFDAYMVAQNP 331
Query: 127 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 186
G + AGL V + + G+ H + +E+ +
Sbjct: 332 GEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKDNIRGKH------VRHYYIAAEEIIWNY 385
Query: 187 RPLRWIG-----------EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 235
P + G + S + E+ +
Sbjct: 386 APSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVYREYTDASFTNRKERGPEEEH 445
Query: 236 HVQPNKTYRLRIASTTALASLNLAVKNHKM------VVVEADGNYVQPFEVDDMDIYSGE 289
+ T + N + +G Y P
Sbjct: 446 LGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPS 505
Query: 290 SYSVLLTTNQDPSYNY-WISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 348
+ V ++ Y W G A P L + Y+ + I P
Sbjct: 506 ASHV----APTETFTYEWTVPKEVGPTNADPVCLAKM-YYSAVDPTKDIFTGLIGPMKIC 560
Query: 349 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGS 408
S + + + + L T N SL L + +
Sbjct: 561 KKGS----------LHANGRQKDVDKEFYLFPT---------VFDENESLLLEDNIRMFT 601
Query: 409 IKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 468
D D++ N + + + +V L +A
Sbjct: 602 TAPDQVDKEDEDFQESNKMHSMNGFMYGNQPG-------LTMCKGDSVVWYLFSAG---- 650
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 528
N +++H + G+ + G +FP L D
Sbjct: 651 NEADVHGIYFSGNTYLWRGERRDTAN-------------------LFPQTSLTLHMWPDT 691
Query: 529 PGAWAFHCHIEPHFHIGMGVVL 550
G + C H+ GM
Sbjct: 692 EGTFNVECLTTDHYTGGMKQKY 713
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 68.1 bits (165), Expect = 5e-12
Identities = 25/98 (25%), Positives = 31/98 (31%), Gaps = 20/98 (20%)
Query: 453 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 512
V+ L N ++H H HGH F RG +
Sbjct: 977 GDEVNWYLMGMG----NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVF 1016
Query: 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
IFP + L PG W HCH+ H H GM
Sbjct: 1017 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTY 1054
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 53.8 bits (128), Expect = 1e-07
Identities = 22/107 (20%), Positives = 33/107 (30%), Gaps = 5/107 (4%)
Query: 53 MGINGQFPG--PTIRARAGDTIAVELTNKLYTEGV-VIHWHGIRQLGTPWADGTASISQC 109
ING+ G + GD + L + +H+HG G S
Sbjct: 959 HAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKH--RGVYSSDVF 1016
Query: 110 PINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEK 156
I PG G + H H+ AG+ + V + K
Sbjct: 1017 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNEDTK 1063
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 43.8 bits (102), Expect = 2e-04
Identities = 19/157 (12%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 6 RHVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIR 65
+ + T + + E + T + + + M P +
Sbjct: 576 KEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLT 635
Query: 66 ARAGDTIAVELTN-KLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD 124
GD++ L + + I++ G T G + P + D
Sbjct: 636 MCKGDSVVWYLFSAGNEADVHGIYFSG----NTYLWRGER-RDTANLFPQTSLTLHMWPD 690
Query: 125 KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY 161
GT+ + G+ V+ + E +
Sbjct: 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTF 727
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 44/206 (21%), Positives = 74/206 (35%), Gaps = 34/206 (16%)
Query: 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVI 87
G + RH K E + + PGP I GDT+ +E TN + +
Sbjct: 45 GGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASL 101
Query: 88 HWHGIRQLGTPWA-DGTASISQCPINPGETYLYRFKVDK-------------AGTYFYHG 133
H HG+ + DGTA +++ + PG T Y ++ K AG + YH
Sbjct: 102 HVHGLD---YEISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHD 157
Query: 134 HLGMQR------SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR 187
H+ GLYG +IV K D ++ +D +
Sbjct: 158 HVVGTEHGTGGIRNGLYGPVIVR----RKGDVLPDATHTIVFNDMTINNRKPHTG---PD 210
Query: 188 PLRWIGEPQTLLINGRGQFNCSLAAH 213
+G+ +++ G++ + H
Sbjct: 211 FEATVGDRVEIVMITHGEYYHTFHMH 236
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 63.6 bits (154), Expect = 5e-11
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 422 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 481
+ + V + T+ + G + V + + + H +H+HGH
Sbjct: 181 RKGDVLPDATHT--IVFNDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGH 238
Query: 482 DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN---PGAWAFHCHI 538
+ G + + + P + +A GAW +HCH+
Sbjct: 239 RWADNRTGILTG--------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHV 290
Query: 539 EPHFHIGM 546
+ H +GM
Sbjct: 291 QSHSDMGM 298
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 3e-27
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR----QLGTPWADGT--ASISQCPIN 112
GPT+ A GD + V NK + + IH GI+ G ++D T +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 113 PGETYLYRFKVDK----------AGTYFYHGHLGM--QRSAGLYGSLIVD---VADGEKE 157
PG+ Y Y + + + T+ Y+ ++ + ++GL G L++ +
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175
Query: 158 PFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQ 205
++ + L+ + + Q L ++ +
Sbjct: 176 QKMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHD 223
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 4e-12
Identities = 12/98 (12%), Positives = 20/98 (20%), Gaps = 23/98 (23%)
Query: 453 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 512
+ + L ++ H +G N +
Sbjct: 222 HDHISWHLIGMSSGPEL----FSIHFNGQVLEQ-------------------NHHKISAI 258
Query: 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
+ T G W I HF GM +
Sbjct: 259 TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYI 296
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 2e-05
Identities = 18/128 (14%), Positives = 35/128 (27%), Gaps = 14/128 (10%)
Query: 32 RHYKWEVEYMFWSPDCKESIVMGINGQFP--------GPTIRARAGDTIAVELTN-KLYT 82
+ ++ + MF D +S + + P I A D I+ L
Sbjct: 177 KMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGP 236
Query: 83 EGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAG 142
E IH++G + + V G + + AG
Sbjct: 237 ELFSIHFNGQVLEQNHHKISAI-----TLVSATSTTANMTVSPEGRWTIASLIPRHFQAG 291
Query: 143 LYGSLIVD 150
+ + +
Sbjct: 292 MQAYIDIK 299
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 9e-27
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
M NG PGPT+ GD + + L N H + G +
Sbjct: 55 AMTFNGSMPGPTLVVHEGDYVQLTLVNPATN----AMPHNVDFHGA--TGALGGAKLTNV 108
Query: 112 NPGETYLYRFKVDKAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEK----EPFHYDG 163
NPGE RFK D++GT+ YH G + +G+ G+L+V DG K +P HYD
Sbjct: 109 NPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDR 168
Query: 164 EFNLLLSDWW 173
+ + D +
Sbjct: 169 AYTIGEFDLY 178
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 21/100 (21%), Positives = 28/100 (28%), Gaps = 17/100 (17%)
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALRFVA 526
+ HL G + GKF NPP ++ T I A +
Sbjct: 241 QANRDTRPHLIGGHGDWVWE-TGKFA----------NPPQRDLETWFIRGGSAGAALYTF 289
Query: 527 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALA 566
PG +A+ H A G V N L
Sbjct: 290 KQPGVYAYLNHNLIEAFELG----AAGHIKVEGKWNDDLM 325
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWA-DGTASISQCP 110
M NG PGP + D + + L N H I A +
Sbjct: 61 AMTFNGSVPGPLMVVHENDYVELRLINPDTN----TLLHNID---FHAATGALGGGALTQ 113
Query: 111 INPGETYLYRFKVDKAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEK----EPFHYD 162
+NPGE RFK K G + YH G + ++G+ G+++V DG K +P YD
Sbjct: 114 VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYD 173
Query: 163 GEFNLLLSDWWHR 175
+ + D++
Sbjct: 174 KIYYVGEQDFYVP 186
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 15/92 (16%)
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALRFVA 526
+ HL G + GKF NPP + T +I A +
Sbjct: 247 QANRDTRPHLIGGHGDYVWA-TGKFR----------NPPDLDQETWLIPGGTAGAAFYTF 295
Query: 527 DNPGAWAFHCHIEPH-FHIG-MGVVLALGVET 556
PG +A+ H F +G G G
Sbjct: 296 RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 4e-26
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKL-YTEGVVIHWHGIRQLGTPWADGTASISQCP 110
NG+ PGP +R R GDT+ + L N + +HG G A+ +Q
Sbjct: 185 YWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ-- 237
Query: 111 INPGETYLYRFKVDKAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNL 167
+PGE + FK G Y YH + + G+YG L+V+ G D EF +
Sbjct: 238 TDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP---QVDREFYV 294
Query: 168 LLSDWW 173
+ + +
Sbjct: 295 MQGEIY 300
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 1e-14
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 12/107 (11%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
V G PT+ G+T+ V L N H + D A+ S
Sbjct: 45 VGGDIDHKINPTLVVHEGETVQVNLVNG----EGAQHDVVV--------DQYAARSAIVN 92
Query: 112 NPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP 158
+ + F K G + Y+ + R AG+ G++ V + +
Sbjct: 93 GKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMK 139
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 1e-08
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 20/107 (18%)
Query: 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 514
TV + +H+ G F + G +PPL +
Sbjct: 348 TVRIFFGVGGPNFT-----SSFHVIGEIFDHVYS-LGSVV----------SPPLIGVQTV 391
Query: 515 F--PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 559
P G T + F D G + H + G+V L V+ N
Sbjct: 392 SVPPGGATIVDFKIDRAGRYILVDHA--LSRLEHGLVGFLNVDGPKN 436
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-24
Identities = 84/543 (15%), Positives = 143/543 (26%), Gaps = 99/543 (18%)
Query: 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR----QLGTPWADGTASISQC--PIN 112
GPTI+A DT+ + L N V +H G+ G + D T+ + +
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMAS-HPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVF 130
Query: 113 PGETYLYRFKVDK----------AGTYFYHGH--LGMQRSAGLYGSLIV-DVADGEKEPF 159
PG ++ Y ++V K TY Y H L ++GL G+L+V KE
Sbjct: 131 PGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKT 190
Query: 160 HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 219
+F LL + + E L + + R + N S
Sbjct: 191 QTLHKFILLFAVFDEGKSWHSETK---NSLMQDRDAA----SARAWPKMHTVNGYVNRS- 242
Query: 220 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTT--------ALASLNLAVKNHKMVVVEAD 271
L K+ + L V+NH+ +E
Sbjct: 243 ------------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLE-- 288
Query: 272 GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 331
+ P + LL + + + A V+ P L + N
Sbjct: 289 ---ISPITFLTAQTLLMDLGQFLLFCHISSHQHDGMEAYVKVDSCPEEPQLRMKNNEEAE 345
Query: 332 ASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLL-----NTQNTIN 386
L+ + D D+S SF PK ++ +
Sbjct: 346 DYDDDLTDSEMDVVRFDDDNSPSFIQIRSVAKKHPKTWVHYIAAEEEDWDYAPLVLAPDD 405
Query: 387 GFTKWAINNVSLTLPPTPYLGSIKYGLKDA-FDQNGPPENFSNEYDVMKPPVNANTTLGS 445
K N Y D F + +E ++ P +
Sbjct: 406 RSYKSQYLNNGPQRIGRKYKKVRFMAYTDETFKTREAIQ---HESGILGPLLYGEV---- 458
Query: 446 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKN 505
T+ +I +N S + + HG + + K
Sbjct: 459 -------GDTLLIIFKN------QASRPYNIYPHGIT----------DVRPLYSRRLPKG 495
Query: 506 PPLKNTAVIFP-----YGWTALRFVADNP-----GAWAFHCHIEPHFHIGMGVVLALGVE 555
I P Y WT + + + G++ L +
Sbjct: 496 VKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLIC 555
Query: 556 TVG 558
Sbjct: 556 YKE 558
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 101 bits (251), Expect = 1e-22
Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 20/136 (14%)
Query: 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQL----GTPWADGTASISQCPI 111
GP + GDT+ + N+ I+ HGI + G + PI
Sbjct: 446 ESGILGPLLYGEVGDTLLIIFKNQAS-RPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPI 504
Query: 112 NPGETYLYRFKVDK----------AGTYFYHGHLGMQR--SAGLYGSLIV---DVADGEK 156
PGE + Y++ V T +Y + M+R ++GL G L++ + D
Sbjct: 505 LPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRG 564
Query: 157 EPFHYDGEFNLLLSDW 172
D +L S +
Sbjct: 565 NQIMSDKRNVILFSVF 580
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 68.9 bits (167), Expect = 2e-12
Identities = 66/584 (11%), Positives = 140/584 (23%), Gaps = 118/584 (20%)
Query: 14 CWILMLCSVFET-SYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTI 72
+IL+ E S+ S+T++ + + + + P + ++
Sbjct: 195 KFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSV 254
Query: 73 AVEL-TNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFY 131
+ E I G L + I+P + + G +
Sbjct: 255 YWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASL-----EISPITFLTAQTLLMDLGQFLL 309
Query: 132 HGHL------GMQ-------------------RSAGLYGSLIVDVADGEKEPFHYDGEFN 166
H+ GM+ A Y + D +
Sbjct: 310 FCHISSHQHDGMEAYVKVDSCPEEPQLRMKNNEEAEDYDDDLTDSEMDVVRFDDDNSPSF 369
Query: 167 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGR---------------GQFNCSLA 211
+ + + +++ W P L + R ++
Sbjct: 370 IQIRSVAKKHPKTWVHYIAAEEEDWDYAPLVLAPDDRSYKSQYLNNGPQRIGRKYKKVRF 429
Query: 212 AHFSNGSAEQCKLRGNEQCAP-QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270
+++ + + + +E +L+ + T + + + + + +
Sbjct: 430 MAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYS 489
Query: 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330
+ D I GE + Y W G + P LT Y
Sbjct: 490 RRLPKGVKHLKDFPILPGEIFK----------YK-WTVTVEDGPTKSDPRCLTRY-YSSF 537
Query: 331 SASKI----PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN 386
+ L P + + D +R +L + N
Sbjct: 538 VNMERDLASGLIGPLLICYKESVDQ--------------RGNQIMSDKRNVILFSVFDEN 583
Query: 387 GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG 446
N P D Q + N Y ++
Sbjct: 584 RSWYLTENIQRFLPNPAGVQLE------DPEFQASNIMHSINGYVFDSLQLSVC------ 631
Query: 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 506
L+ + + A ++ G+ F
Sbjct: 632 -----LHEVAYWYILSIGAQ----TDFLSVFFSGYTFKHKMVY----------------- 665
Query: 507 PLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
++T +FP+ + +NPG W CH + GM +L
Sbjct: 666 --EDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALL 707
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 42.3 bits (98), Expect = 4e-04
Identities = 13/106 (12%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Query: 58 QFPGPTIRARAGDTIAVELTN-KLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGET 116
F + + + + T+ + + + G + T + P
Sbjct: 622 VFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVYEDTL-----TLFPFSG 676
Query: 117 YLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD 162
++ G + H R+ G+ L V D ++ D
Sbjct: 677 ETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYYED 722
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 95.7 bits (238), Expect = 8e-22
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
M +G PGP + GD + + L N H I A G ++ I
Sbjct: 54 AMTFDGSIPGPLMIVHEGDYVELTLINPPEN----TMPHNIDFHAATGALGGGGLT--LI 107
Query: 112 NPGETYLYRFKVDKAGTYFYHGHLG-----MQRSAGLYGSLIVDVADGEK----EPFHYD 162
NPGE + RFK +AG + YH G +G+ G ++V DG K +P YD
Sbjct: 108 NPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYD 167
Query: 163 GEFNLLLSDWWH 174
+ + SD +
Sbjct: 168 TVYYIGESDHYI 179
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 18/82 (21%)
Query: 458 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIF 515
V+ ++ R HL G ++ GKF N P ++ T I
Sbjct: 235 VLFVHSQPNRD-----SRPHLIGGHGDLVWE-TGKFH----------NAPERDLETWFIR 278
Query: 516 PYGWTALRFVADNPGAWAFHCH 537
A + PG +A+ H
Sbjct: 279 GGTAGAALYKFLQPGVYAYVNH 300
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 81.4 bits (200), Expect = 3e-16
Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR----QLGTPWADGT--ASISQC 109
+ GP IRA D I V N + +H HG+ G + D +
Sbjct: 63 HLGILGPVIRAEVDDVIQVRFKNLA-SRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDN 121
Query: 110 PINPGETYLYRFKVDK----------AGTYFYHGHLGM--QRSAGLYGSLIVD---VADG 154
I P +TY Y + + Y+ + +GL G L++ D
Sbjct: 122 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK 181
Query: 155 EKEPFHYDGEFNLLLSDW 172
E EF LL +
Sbjct: 182 ETNMPVDMREFVLLFMVF 199
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 16/78 (20%)
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 528
+IH H HG G + + + P + L A
Sbjct: 258 GSRDIHVVHFHGQTLLENGTQQHQ----------------LGVWPLLPGSFKTLEMKASK 301
Query: 529 PGAWAFHCHIEPHFHIGM 546
PG W + GM
Sbjct: 302 PGWWLLDTEVGEIQRAGM 319
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 5e-11
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 18/125 (14%)
Query: 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYR 120
GP IRA D I V N+ + + I A + + P ET Y
Sbjct: 198 GPYIRAEVEDNIMVTFRNQA-SRPYSFYSSLISYEEDQR--QGAEPRKNFVKPNETKTYF 254
Query: 121 FKVDKAG----------TYFYHGHLGMQR--SAGLYGSLIV---DVADGEKEPFHYDGEF 165
+KV + Y + +++ +GL G L+V + + EF
Sbjct: 255 WKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEF 314
Query: 166 NLLLS 170
L +
Sbjct: 315 ALFFT 319
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Length = 112 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 1e-10
Identities = 21/94 (22%), Positives = 28/94 (29%), Gaps = 21/94 (22%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
+ N T+ + GD + V + NK + I G Q I
Sbjct: 28 IRAFNVLNEPETLVVKKGDAVKVVVENK----SPISEGFSIDAFGV----------QEVI 73
Query: 112 NPGETYLYRFKVDKAGTYFYH-------GHLGMQ 138
GET F DKAG + HL
Sbjct: 74 KAGETKTISFTADKAGAFTIWCQLHPKNIHLPGT 107
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Length = 154 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 1e-10
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Query: 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWA------DGTASISQCPI- 111
PT+ AG T+ V N T H I + G P+A A P+
Sbjct: 58 KKNPTLEIPAGATVDVTFIN---TNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVP 114
Query: 112 NPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIV 149
G+ F AGTY+Y + + G++G ++V
Sbjct: 115 KDGKFGYTDFTWHPTAGTYYYVCQIPGMAATGMFGKIVV 153
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Length = 595 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 24/127 (18%)
Query: 35 KWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQ 94
E + + + + F + + GD + V +TN + + HG
Sbjct: 486 DNWTEEVIRDGNKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLT---HGFTM 542
Query: 95 LGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYH-------GHLGMQRSAGLYGSL 147
I P T F G Y+Y+ H+ M+ G +
Sbjct: 543 GNYGV--------AMEIGPQMTSSVTFVAANPGVYWYYCQWFCHALHMEMR------GRM 588
Query: 148 IVDVADG 154
+V+ +
Sbjct: 589 LVEPKEA 595
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Length = 105 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 1e-04
Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 16/108 (14%)
Query: 51 IVMGINGQ---FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+ MG + F + GDT V+ N ++ + S S
Sbjct: 5 VKMGADSGLFQFEPANVTVHPGDT--VKWVNNKLPPHNILFDDKQVPGASKELADKLSHS 62
Query: 108 QCPINPGETYLYRFKVD-KAGTYFY----HGHLGMQRSAGLYGSLIVD 150
Q +PGE+Y F D AGTY Y H GM G + V+
Sbjct: 63 QLMFSPGESYEITFSSDFPAGTYTYYCAPHRGAGM------VGKITVE 104
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Length = 140 | Back alignment and structure |
|---|
Score = 41.1 bits (95), Expect = 2e-04
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 27/129 (20%)
Query: 44 SPDCKESIVMGING-QFPGPTIRARAGDTIAVELTNK-----------------LYTEGV 85
+P + + F ++ A + ++ N+ +
Sbjct: 14 TPAQTVEVRAAPDALAFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN 73
Query: 86 VIHWHGIRQLGTPWADGTASISQCP-INPGETYLYRFKVDKAGTYFYH----GHLGMQRS 140
+ L P D +++ +N GE+ F+ GTY Y GH
Sbjct: 74 TAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGH----YL 129
Query: 141 AGLYGSLIV 149
AG+ G+L V
Sbjct: 130 AGMKGTLTV 138
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Length = 638 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 24/163 (14%), Positives = 50/163 (30%), Gaps = 41/163 (25%)
Query: 7 HVAVVVTCWILMLCSVFETSYGSKTRHYKWEVEY---------MFWSPDCKESIVMGING 57
H ++ + +++ + + + + + + +
Sbjct: 494 HDCIMARRDQIKTKKIWDRNDPFFAPTVEMAKKDGINLDTDNKVIRDGNKVRVYMTSMAP 553
Query: 58 QFPGPTIRARAGDTIAVELTNKLYTE----GVVIHWHGIRQLGTPWADGTASISQCPINP 113
F + GD + V +TN E G V+ HG+ I+P
Sbjct: 554 AFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------SMEISP 598
Query: 114 GETYLYRFKVDKAGTYFYH-------GHLGMQRSAGLYGSLIV 149
+T F DK G ++Y+ H+ M G ++V
Sbjct: 599 QQTSSITFVADKPGLHWYYCSWFCHALHMEMV------GRMMV 635
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Length = 98 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 4e-04
Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 23/108 (21%)
Query: 51 IVMGINGQ---FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTP--WADGTAS 105
+ +G + F T+ ++G+T V N H + P S
Sbjct: 4 VKLGADSGALEFVPKTLTIKSGET--VNFVN----NAGFPHNIVFDEDAIPSGVNADAIS 57
Query: 106 ISQCPINPGETYLYRFKVDKAGTYFY----HGHLGMQRSAGLYGSLIV 149
PGETY + AG Y Y H GM G +IV
Sbjct: 58 RDDYLNAPGETYSVKL--TAAGEYGYYCEPHQGAGM------VGKIIV 97
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Length = 99 | Back alignment and structure |
|---|
Score = 37.9 bits (88), Expect = 8e-04
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 17/107 (15%)
Query: 51 IVMGINGQ---FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+++G + F G+ + N ++ G + + S
Sbjct: 3 VLLGADDGSLAFVPSEFSISPGEK--IVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEE 60
Query: 108 QCPINPGETYLYRFKVDKAGTYFY----HGHLGMQRSAGLYGSLIVD 150
GET+ G Y + H GM G + V+
Sbjct: 61 DLLNAKGETFEVAL--SNKGEYSFYCSPHQGAGM------VGKVTVN 99
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.96 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.96 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.96 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.95 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.95 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.95 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.9 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.89 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.87 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.86 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.86 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.84 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.8 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.78 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.71 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.69 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.61 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.61 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.56 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.55 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.53 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.49 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.49 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.47 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.46 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.45 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.45 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.42 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.41 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.37 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.37 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.35 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.31 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.29 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 99.21 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.13 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.09 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 99.05 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.04 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.03 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.98 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.87 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.8 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.78 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.77 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.69 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.68 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.66 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.62 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.61 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.6 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.59 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.56 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.56 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.55 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.53 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.52 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.43 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.42 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.38 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.33 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.33 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.29 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.28 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.27 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.24 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.22 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.22 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.2 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 98.09 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.09 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 98.06 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 98.05 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 98.05 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.01 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.92 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.86 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.82 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.64 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 97.51 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.1 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 97.03 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.01 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 96.99 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 96.97 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.88 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 96.87 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 96.85 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 96.18 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 95.93 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 95.9 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 95.64 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.62 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 95.27 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.17 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 94.92 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 94.77 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 94.5 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 94.31 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 93.24 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 89.74 | |
| 1cyx_A | 205 | CYOA; electron transport; 2.30A {Escherichia coli} | 86.08 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-105 Score=880.56 Aligned_cols=550 Identities=72% Similarity=1.296 Sum_probs=441.6
Q ss_pred CceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 47899999999999999999999999999999999999999999999999943499999999999999899999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCCC
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRP 188 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~ 188 (580)
|+|+||++|+|+|+++++||||||||.+.|+.+||+|+|||++++....|+.+|+|++|+++||++.+..++...+...+
T Consensus 81 ~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (552)
T 1aoz_A 81 CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKP 160 (552)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSS
T ss_pred CCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999998766667888999999999999998776665444433
Q ss_pred CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEE
Q 008038 189 LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV 268 (580)
Q Consensus 189 ~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~vi 268 (580)
..+.+.++.++|||+..++|+....+.. ....|+...+.....+.++|++||+|||||||+|..+.+.|+|+||+|+||
T Consensus 161 ~~~~~~~~~~liNG~~~~~c~~~~~~~~-~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 161 IRWIGEPQTILLNGRGQFDCSIAAKYDS-NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp CCCCCSCSEEEETTBCCSSSBTTGGGCT-TSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred ccCCCCCCeEEECCccccCcccCccccc-ccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 3334568899999999999876432211 223455222233345589999999999999999999999999999999999
Q ss_pred EECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCC
Q 008038 269 EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 348 (580)
Q Consensus 269 a~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~ 348 (580)
|+||.+++|+.++++.|+|||||||+|++++.++|+|||++.......+.....|+|+|.+......+....|..|.+++
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~ 319 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD 319 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999999543678999999876532345677899999865432222333344454444
Q ss_pred CCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCC
Q 008038 349 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 428 (580)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~ 428 (580)
......+............++...++++.+....+..++...|+|||++|..|..|.|.+.+.++.+.|+.+.++..+..
T Consensus 320 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~ 399 (552)
T 1aoz_A 320 FDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPE 399 (552)
T ss_dssp HHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCT
T ss_pred ccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccc
Confidence 32221111111111011223445688888877655455677899999999999999999988888777765544433322
Q ss_pred CcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCc
Q 008038 429 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508 (580)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~ 508 (580)
.++......+...+.++.++.++.|++|+|+|+|.+.+..+....||||||||+|+||+++.|.|++.+...+|+.+|.|
T Consensus 400 ~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~ 479 (552)
T 1aoz_A 400 DYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479 (552)
T ss_dssp TCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCE
T ss_pred ccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCc
Confidence 23322222223445677889999999999999998754111133799999999999999998999875566789999999
Q ss_pred cceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCCCccccccCCCCcCCCCCCC
Q 008038 509 KNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQ 579 (580)
Q Consensus 509 rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~~~ 579 (580)
|||+.|++++|++|||+|||||.|+|||||++|++.|||++|.|++++++++|++++.||.++.-+++++-
T Consensus 480 RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~ 550 (552)
T 1aoz_A 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPK 550 (552)
T ss_dssp ESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCS
T ss_pred cCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999876666543
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-97 Score=808.95 Aligned_cols=486 Identities=30% Similarity=0.498 Sum_probs=387.9
Q ss_pred CCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCc
Q 008038 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.+++++|+|++++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 46789999999999999999999999999999999999999999999999995448999999999999999999999999
Q ss_pred cccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHHhhhcC
Q 008038 108 QCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSS 186 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~~~~~~ 186 (580)
||+|+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.+ ..||.|. +|+++||+++...++......
T Consensus 144 q~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~ 219 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARL 219 (580)
T ss_dssp BCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTT
T ss_pred cCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998653 3588887 999999999988777655443
Q ss_pred CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeE
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMV 266 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~ 266 (580)
.+ ...++.++|||++.++|+...+ ..|. .....+.+++++|++|||||||+|....+.|+|+||+|+
T Consensus 220 ~~---~~~~d~~liNG~~~~~c~~~~~------~~~~----~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~ 286 (580)
T 3sqr_A 220 GA---PPALENTLMNGTNTFDCSASTD------PNCV----GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLT 286 (580)
T ss_dssp SC---CCCBSEEEETTBCCCCCTTCCC------TTBC----CCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEE
T ss_pred cC---CCCCceEEECCcccCCCccccc------cccc----cCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEE
Confidence 22 4578999999999987764211 2343 123456899999999999999999999999999999999
Q ss_pred EEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC---CCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 267 VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 267 via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
|||+||.+++|+.++++.|++||||||+|++++ ++|+|||++.....|. ......|||+|.++... . |..
T Consensus 287 VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~-~-----P~~ 359 (580)
T 3sqr_A 287 VIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA-N-----PTS 359 (580)
T ss_dssp EEEETTEEEEEEEESSEEECTTCEEEEEEECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC-C-----CCC
T ss_pred EEEeCCccCCceEeeEEEEccceEEEEEEEeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC-C-----CCC
Confidence 999999999999999999999999999999997 5789999998766553 22357899999854321 1 112
Q ss_pred CCCCCCCccccc-cccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccC-CCCCcchhhhccCCccCCCCC
Q 008038 344 PRWDDYDHSKSF-SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNG 421 (580)
Q Consensus 344 p~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~f~~~~ 421 (580)
+.+.......+. ...+.+..+ ...+...+.++.+... .++...|+|||.+|.. +..|.|.+...+ ...|
T Consensus 360 ~~~~~~~~~~~~~~~~L~P~~~-~~~~~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g-~~~~---- 430 (580)
T 3sqr_A 360 VGTTPRGTCEDEPVASLVPHLA-LDVGGYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNN-ETIF---- 430 (580)
T ss_dssp CCCCCCCCSCCSCGGGCCBSSC-CBCCSEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTT-CCCC----
T ss_pred CCCCccchhhcccccccccCCC-CCCCCccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcC-CccC----
Confidence 222222111111 012222211 1122233444444432 2456799999999975 588888766532 1111
Q ss_pred CCCCCCCCcccCCCCCCCCccCCceeEEc----cCCcEEEEEEEcCC--CCCCCCCCCCCeeecCCCeEEEeecCCCCCc
Q 008038 422 PPENFSNEYDVMKPPVNANTTLGSGVYML----GLNTTVDVILQNAN--AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK 495 (580)
Q Consensus 422 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~G~~v~~~l~N~~--~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~ 495 (580)
..+ ..++.+ +.|++|+|+|+|.+ .. .||||||||+|+||+++.|.|++
T Consensus 431 -----~~~---------------~~~~~~~~~~~~~~~VeiVi~n~~~~~~------~HP~HLHGh~F~vv~~g~G~f~~ 484 (580)
T 3sqr_A 431 -----PTE---------------YNVVALEQTNANEEWVVYVIEDLTGFGI------WHPIHLHGHDFFIVAQETDVFNS 484 (580)
T ss_dssp -----CGG---------------GCEEEECC----CCEEEEEEEECSSSCC------CEEEEESSCCEEEEEEESSCCCT
T ss_pred -----CCC---------------cceeecccccCCCcEEEEEEeCCCcccc------ceeeEecCceEEEEecCCCccCc
Confidence 101 112444 46999999999987 44 89999999999999999999987
Q ss_pred -ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCC---Cccc-cccCCC
Q 008038 496 -EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI---PNQA-LACGLT 570 (580)
Q Consensus 496 -~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~---p~~~-~~c~~~ 570 (580)
.++..+|+.||++|||+.|++++|++|||++||||.|+|||||++|++.||+++|.|+++++++. |+.. ..|..|
T Consensus 485 ~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 485 DESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANW 564 (580)
T ss_dssp TTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHH
T ss_pred cccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHH
Confidence 34578999999999999999999999999999999999999999999999999999999988663 4443 689877
Q ss_pred Cc
Q 008038 571 GK 572 (580)
Q Consensus 571 ~~ 572 (580)
..
T Consensus 565 ~~ 566 (580)
T 3sqr_A 565 NA 566 (580)
T ss_dssp HH
T ss_pred hh
Confidence 54
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-94 Score=783.32 Aligned_cols=478 Identities=30% Similarity=0.489 Sum_probs=378.1
Q ss_pred ceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
++++|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++|+||+|+++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999943499999999999998899999999999
Q ss_pred ccCCCCCeEEEEEEcC-CCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhcCC
Q 008038 109 CPINPGETYLYRFKVD-KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR 187 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~ 187 (580)
|+|+||++|+|+|++. ++||||||||...|+.+||+|+|||+++.+ |+.||+|++|+++||+++...++...+...
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 157 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSV 157 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSST
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhcc
Confidence 9999999999999995 999999999999999999999999999753 567899999999999999887765443221
Q ss_pred --CCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 188 --PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 188 --~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
.......++.+||||+..+ .++|++||+|||||||+|..+.+.|+|+||+|
T Consensus 158 ~~~~g~~~~~d~~liNG~~~~---------------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~ 210 (534)
T 1zpu_A 158 YNPTGAEPIPQNLIVNNTMNL---------------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEM 210 (534)
T ss_dssp TCTTCCCCCCSEEEETTBSSC---------------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCE
T ss_pred ccCCCCCCCCceEEECCCCce---------------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCee
Confidence 1111346899999999765 79999999999999999999999999999999
Q ss_pred EEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCC----C--CCCCceEEEEecCCCCCCCCCCC
Q 008038 266 VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK----P--ATPPALTLLNYHPTSASKIPLSP 339 (580)
Q Consensus 266 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~----~--~~~~~~ail~y~~~~~~~~~~~~ 339 (580)
+|||+||.+++|+.++++.|+|||||||+|++++.+.++|||++.....+ + ......++|+|.+......+
T Consensus 211 ~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~--- 287 (534)
T 1zpu_A 211 TVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQ--- 287 (534)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCC---
T ss_pred EEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCC---
Confidence 99999999999999999999999999999999875568999998765332 1 23455799999854321111
Q ss_pred CCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeee-cCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 340 PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 340 ~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
+....+.. ...+. .+..... ...+..+++++.+...... .++...|.|||++|..|..|.|.+.... +.+.
T Consensus 288 -~~~~~~~~--~~~~~--~l~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~ 359 (534)
T 1zpu_A 288 -NYVDSIDN--FLDDF--YLQPYEK-EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA 359 (534)
T ss_dssp -CCCSCSSC--SCCGG--GCCBSSC-CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT
T ss_pred -Cccccccc--ccccc--cceeCCC-CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc
Confidence 00111111 01111 1111111 1222356788877765432 3455689999999999999988766421 1110
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC-------
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG------- 491 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g------- 491 (580)
.. + .. ...++.++.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+
T Consensus 360 ~~--~-------~~--------~~~~~~~~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~G 416 (534)
T 1zpu_A 360 NN--S-------EI--------YGSNTHTFILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALGE 416 (534)
T ss_dssp TC--G-------GG--------GCSSSCEEEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGTC
T ss_pred CC--C-------cc--------cCCCceEEEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCccccccC
Confidence 00 0 00 11124568899999999999998877 8999999999999999764
Q ss_pred ---CCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC-----CCcc
Q 008038 492 ---KFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPNQ 563 (580)
Q Consensus 492 ---~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~-----~p~~ 563 (580)
.|++.+.. ....+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||++|.+.++++++ +|+.
T Consensus 417 ~p~~~~~~~~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~ 495 (534)
T 1zpu_A 417 VPHSFDPDNHP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSEN 495 (534)
T ss_dssp CCCCCBTTBCC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHH
T ss_pred cccccCccccc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChh
Confidence 34432111 22468999999999999999999999999999999999999999999999998876643 4544
Q ss_pred c-cccCCCCc
Q 008038 564 A-LACGLTGK 572 (580)
Q Consensus 564 ~-~~c~~~~~ 572 (580)
. +.|..+..
T Consensus 496 ~~~~C~~~~~ 505 (534)
T 1zpu_A 496 HLEVCQSCSV 505 (534)
T ss_dssp HHHHHHHTTC
T ss_pred HhhhhhccCC
Confidence 4 78887754
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-93 Score=765.09 Aligned_cols=469 Identities=29% Similarity=0.490 Sum_probs=367.5
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC----CceeeeeccccccCCCCCCCCCCCc
Q 008038 32 RHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|.. .+++|||||+++.+++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 469999999999999999999999999999999999999999999999543 4799999999999889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCC-CCCCCCC-cceEEEEeecccCchHHHHhhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~-~~p~~~d-~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+. ..++.+| .|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999 89999999999999999999999999987542 1224443 568999999999876432
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~ 264 (580)
.. ..+..++.++|||++...|.- .....+.++|++|++|||||||+|..+.+.|+|+||+
T Consensus 161 --~~-~~p~~~d~~liNG~g~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~ 220 (495)
T 3t6v_A 161 --GA-GGAITADSTLIDGLGRTHVNV-----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHD 220 (495)
T ss_dssp --CS-SSCCCCSEEEETTBCCBSSSC-----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred --cc-CCCCCCcEEEECCcCcCCCCc-----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCe
Confidence 11 114478999999998763311 0123458999999999999999999999999999999
Q ss_pred eEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCCCCCCCCCC
Q 008038 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 265 ~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
|+|||+||.+++|+.++++.|+|||||||+|++++ +.|+|||++.....+.. .....|+|+|.+..... +....+.
T Consensus 221 ~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~ 298 (495)
T 3t6v_A 221 MTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVAST 298 (495)
T ss_dssp EEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCS
T ss_pred EEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCC
Confidence 99999999999999999999999999999999987 56899999987544322 22357999998543221 1111110
Q ss_pred CCCCCCCCccccccccccccCCC--C--CCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
. ......+ ..+.+.... + ..+..+++++.+....+ . ..|+|||++|..|..|.|.+...+. +.
T Consensus 299 ~----~~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~--~--~~w~iNg~s~~~~~~P~L~~~~~g~---~~ 365 (495)
T 3t6v_A 299 V----HTKCLIE--TDLHPLSRNGVPGNPHQGGADCNLNLSLGFA--C--GNFVINGVSFTPPTVPVLLQICSGA---NT 365 (495)
T ss_dssp S----CSSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEE--T--TEEEETTBCCCCCSSCHHHHHHTTC---CS
T ss_pred C----Ccccccc--ccccccccccCCCccCCCCCcEEEEEEEEec--C--cEEEEcCEecCCCCCcchhhhhcCC---cC
Confidence 0 0111111 112222111 1 11234577776655432 1 2799999999999989887765321 10
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEE-cCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCccc
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 497 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~-N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~ 497 (580)
.. .......++.++.|++|+|+|+ |...+ .||||||||+|+|++.++
T Consensus 366 ~~-------------------~~~~~~~v~~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~g------- 413 (495)
T 3t6v_A 366 AA-------------------DLLPSGSVISLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESAS------- 413 (495)
T ss_dssp ST-------------------TSSSTTSEEEECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECTT-------
T ss_pred cc-------------------cccCCcceEEecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecCC-------
Confidence 00 0112334789999999999998 55555 899999999999998642
Q ss_pred ccccCCCCCCccceEEeCC-CcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC---CCccc-cccCCCC
Q 008038 498 EKKFNLKNPPLKNTAVIFP-YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQA-LACGLTG 571 (580)
Q Consensus 498 ~~~~~~~~p~~rDTv~vpp-~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~p~~~-~~c~~~~ 571 (580)
...+|+.+|.+|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.|+++++++ +|+.. ..|..|.
T Consensus 414 ~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 414 NSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 2357888999999999997 8999999999999999999999999999999999999987753 56554 6897664
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-93 Score=765.46 Aligned_cols=467 Identities=29% Similarity=0.544 Sum_probs=367.9
Q ss_pred EEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC----CceeeeeccccccCCCCCCCCCCCc
Q 008038 32 RHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|.. ++++|||||+++.+++|+||++++|
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 469999999999999999999999999999999999999999999999543 4799999999999889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCC-CCCCCC-cceEEEEeecccCchHHHHhhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEK-EPFHYD-GEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~-~p~~~d-~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+.. .++.+| .|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999 899999999999999999999999999875411 223443 56799999999976532
Q ss_pred cCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCee
Q 008038 185 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 264 (580)
Q Consensus 185 ~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~ 264 (580)
.+ ..+..++.++|||++..+|.. ....+.++|++|++|||||||+|..+.+.|+|+||+
T Consensus 159 --~~-~~p~~~d~~liNG~~~~~~~~------------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~ 217 (499)
T 3pxl_A 159 --GP-RFPGGADATLINGKGRAPSDS------------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHN 217 (499)
T ss_dssp --SC-SSCSSCSEEEETTBCCCTTCT------------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBC
T ss_pred --cc-CCCCCCcEEEECCCCcCCCCC------------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCe
Confidence 11 113478999999998764321 223468999999999999999999999999999999
Q ss_pred eEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCCCCCCCCCC
Q 008038 265 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 265 ~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
|+|||+||.+++|+.++++.|+|||||||+|++++ +.|+|||++.....+.. .....|+|+|.+..... +...
T Consensus 218 ~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~--- 292 (499)
T 3pxl_A 218 LTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE-PTTN--- 292 (499)
T ss_dssp EEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCC---
T ss_pred EEEEEECCcccCceEeeeEEECCCcEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCCC-CCCC---
Confidence 99999999999999999999999999999999987 56899999986544322 22457999998653221 1111
Q ss_pred CCCCCCCCccccccccccccCCC--C--CCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCC
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 418 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~--~--~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~ 418 (580)
.........+ ..+.+.... + ..+..+++++.+....+ + ..|+|||++|..|..|.|.+...+. +.
T Consensus 293 --~~~~~~~~~~--~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~---~~ 361 (499)
T 3pxl_A 293 --QTTSVKPLNE--VDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGA---QT 361 (499)
T ss_dssp --CCCCSSBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTC---CS
T ss_pred --CCCCCccccc--ccccccccccCCCcccCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCC---cc
Confidence 1111111111 112222111 1 11234577776665432 2 2799999999999999887765321 10
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEE---cCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc
Q 008038 419 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ---NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK 495 (580)
Q Consensus 419 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~---N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~ 495 (580)
.. .......++.++.|++|+|+|+ |.+.+ .||||||||+|+|++.++
T Consensus 362 ~~-------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~g----- 411 (499)
T 3pxl_A 362 AQ-------------------DLLPSGSVYVLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSAG----- 411 (499)
T ss_dssp TT-------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECTT-----
T ss_pred cc-------------------ccCCCceeEEecCCCEEEEEEecCcccCCC------CccceecCCcEEEEeccC-----
Confidence 00 0112334789999999999999 44444 899999999999998632
Q ss_pred ccccccCCCCCCccceEEeCC---CcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccccC---CCccc-cccC
Q 008038 496 EDEKKFNLKNPPLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQA-LACG 568 (580)
Q Consensus 496 ~~~~~~~~~~p~~rDTv~vpp---~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~p~~~-~~c~ 568 (580)
...+|+.+|.+|||+.|++ |+|++|||++||||.|+|||||++|++.||+++|.|+++++++ +|+.. ..|.
T Consensus 412 --~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~ 489 (499)
T 3pxl_A 412 --STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCP 489 (499)
T ss_dssp --CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHH
T ss_pred --CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhh
Confidence 2357888999999999997 9999999999999999999999999999999999999998853 56554 7898
Q ss_pred CCCc
Q 008038 569 LTGK 572 (580)
Q Consensus 569 ~~~~ 572 (580)
.|..
T Consensus 490 ~~~~ 493 (499)
T 3pxl_A 490 TYDA 493 (499)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 7754
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-92 Score=766.81 Aligned_cols=475 Identities=28% Similarity=0.482 Sum_probs=366.7
Q ss_pred cCCceEEEEEEEEEEEeCCCCc-eeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC-----CceeeeeccccccCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCK-ESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-----EGVVIHWHGIRQLGTPWA 100 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~-----~~~siH~HG~~~~~~~~~ 100 (580)
..+...+|+|++++..+++||+ ++.+|+|||++|||+||+++||+|+|+|+|+ ++ ++++|||||+++.+++|+
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~-l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQ-LTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEEC-CCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEEC-CCCccCCCCceEecCCeeccCCCcc
Confidence 4566778999999999999999 9999999999999999999999999999999 55 999999999999888999
Q ss_pred CCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC---cceEEEEeecccCc
Q 008038 101 DGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD---GEFNLLLSDWWHRS 176 (580)
Q Consensus 101 DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~~~d~~~~~ 176 (580)
||+|+++||+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||+++.+ ..+..|| +|++|+++||+++.
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSL 176 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCC
Confidence 99999999999999999999995 8999999999999999999999999998753 2233343 69999999999987
Q ss_pred hHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeE
Q 008038 177 VHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASL 256 (580)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~ 256 (580)
..++... .... ...++.++|||+....|.. .....+.++|++|++|||||||+|..+.+
T Consensus 177 ~~~~~~~---~~~~-~~~~d~~liNG~~~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~ 235 (521)
T 1v10_A 177 STVLFPN---PNKA-PPAPDTTLINGLGRNSANP-----------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNY 235 (521)
T ss_dssp CC----------CC-CSCCSEEEETTBCCCSSCG-----------------GGSCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred HHHHhhc---cCCC-CCCCCEEEECCcccCCCCC-----------------CCCCceEEEECCCCEEEEEEEecCCcccE
Confidence 6554321 1111 3468999999998865431 11233589999999999999999999999
Q ss_pred EEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC--CCCceEEEEecCCCCCC
Q 008038 257 NLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASK 334 (580)
Q Consensus 257 ~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~--~~~~~ail~y~~~~~~~ 334 (580)
.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.....+.. .....++|+|.+.....
T Consensus 236 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~ 314 (521)
T 1v10_A 236 AFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE 314 (521)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC
T ss_pred EEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC
Confidence 9999999999999999999999999999999999999999987 56899999987543221 12336999998644321
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCC--CCC--CCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhh
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIK 410 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~--~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~ 410 (580)
+.... . ......+ ..+..... .+. .+...++++.+.... .+....|+|||++|..+..|.|.+..
T Consensus 315 -p~~~~-----~-~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~ 383 (521)
T 1v10_A 315 -PTTSQ-----N-SGTALNE--ANLIPLINPGAPGNPVPGGADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQIL 383 (521)
T ss_dssp -CCCCC-----C-CSCBCCG--GGCCBSSCCCCSSCSSTTCSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHH
T ss_pred -CCCCC-----C-cccccch--hhcccCCcccCCCcccCCcceEEEEEEEec--CCceeEEEECCCcccCCCCchhhhhh
Confidence 11110 0 0000011 11111111 111 111334454443221 12224799999999988888777664
Q ss_pred ccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecC
Q 008038 411 YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGE 490 (580)
Q Consensus 411 ~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~ 490 (580)
.+. +. +. ....++.++.++.|++|+|+++| .+ .||||||||+|+|++++.
T Consensus 384 ~g~---~~----~~---------------~~~~~~~~~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~ 433 (521)
T 1v10_A 384 SGV---TN----PN---------------DLLPGGAVISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPG 433 (521)
T ss_dssp HTC---CC----GG---------------GSSSTTTEEEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTT
T ss_pred cCC---cc----cc---------------cCCCCceEEEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCC
Confidence 221 10 00 01123456899999999999999 45 899999999999999865
Q ss_pred CCCCcccccccCCCCCCccceEEe-CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccccccc---CCCc-ccc
Q 008038 491 GKFTKEDEKKFNLKNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QAL 565 (580)
Q Consensus 491 g~~~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~---~~p~-~~~ 565 (580)
+. .+|+.+|.||||+.| ++++|++|||++||||.|+|||||++|++.|||++|.|++++++ .+|+ ..+
T Consensus 434 ~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~ 506 (521)
T 1v10_A 434 SS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDD 506 (521)
T ss_dssp CS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHT
T ss_pred CC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhh
Confidence 42 357789999999999 89999999999999999999999999999999999999988764 3554 468
Q ss_pred ccCCCCcC
Q 008038 566 ACGLTGKR 573 (580)
Q Consensus 566 ~c~~~~~~ 573 (580)
.|..|+.-
T Consensus 507 ~C~~~~~~ 514 (521)
T 1v10_A 507 LCPKYNAN 514 (521)
T ss_dssp HHHHHTTC
T ss_pred hchhhhcc
Confidence 99988763
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-91 Score=768.54 Aligned_cols=482 Identities=27% Similarity=0.454 Sum_probs=376.3
Q ss_pred cCCceEEEEEEEEEEE--eCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMF--WSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT 103 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~ 103 (580)
..+++++|+|++++.. +.+||+. +.+|+|||++|||+||+++||+|+|+|+|+|..++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4677899999999998 8999999 999999999999999999999999999999547899999999999888999999
Q ss_pred CCCccccCCC-CCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHH
Q 008038 104 ASISQCPINP-GETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQE 181 (580)
Q Consensus 104 ~~~~q~~i~p-G~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~ 181 (580)
|+++||+|+| |++|+|+|++.++||||||||.+.|+.+||+|+|||+++.. ..||+|. +|+++||++....++.
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~ 184 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLV 184 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHH
T ss_pred CccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHh
Confidence 9999999999 99999999999999999999999999999999999998653 3578887 9999999999877665
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEe
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVK 261 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~ 261 (580)
.... ... ...++.++|||+..+.|.. ....+.+++++||+|||||||+|..+.+.|+|+
T Consensus 185 ~~~~--~~~-~~~~d~~liNG~~~~~~~~------------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~ 243 (559)
T 2q9o_A 185 HFTQ--NNA-PPFSDNVLINGTAVNPNTG------------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLV 243 (559)
T ss_dssp HHHT--TSC-CCCBSEEEETTBCBCTTTC------------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEET
T ss_pred hhhh--cCC-CCccceeEECCccccCcCC------------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEEC
Confidence 3322 111 3468999999999875532 112458999999999999999999999999999
Q ss_pred CeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee--cCCCC--CCCCceEEEEecCCCCCCCCC
Q 008038 262 NHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV--RGRKP--ATPPALTLLNYHPTSASKIPL 337 (580)
Q Consensus 262 gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~--~~~~~--~~~~~~ail~y~~~~~~~~~~ 337 (580)
||+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.. ...+. ......++|+|.+.... .|.
T Consensus 244 gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~ 321 (559)
T 2q9o_A 244 NHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPT 321 (559)
T ss_dssp TBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCC
T ss_pred CCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCC
Confidence 99999999999999999999999999999999999987 57899999986 33332 23456899999854321 111
Q ss_pred CCCCCCCCCCCCCccccccccccccCCC--CCC--CCCcceEEEEEeeeeecCCeEEEEEcceeccCC-CCCcchhhhcc
Q 008038 338 SPPPITPRWDDYDHSKSFSNKIFALMGS--PKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYG 412 (580)
Q Consensus 338 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~--~~~--p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p-~~p~l~~~~~~ 412 (580)
... .+. .+...... ..+.+..+. +.+ ....++++.+.... ...+...|+|||++|..+ ..|.|.....+
T Consensus 322 ~~~--~~~-~~~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g 395 (559)
T 2q9o_A 322 DEG--TPP-VDHQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTG 395 (559)
T ss_dssp CCC--CCC-CCCTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHT
T ss_pred CCC--CcC-CCcccccc--cccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcC
Confidence 110 000 01000000 111111110 111 11123444443321 123456899999999765 67776665432
Q ss_pred CCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEcc-CCcEEEEEEEcCC----CCCCCCCCCCCeeecCCCeEEEe
Q 008038 413 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLG-LNTTVDVILQNAN----AIRPNLSEIHPWHLHGHDFWVLG 487 (580)
Q Consensus 413 ~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~l~N~~----~~~~~~~~~HP~HlHG~~F~vv~ 487 (580)
.. .|. .+..++.++ .+++++|+++|.+ .+ .||||||||+|+||+
T Consensus 396 ~~-~~~------------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~ 444 (559)
T 2q9o_A 396 NT-SYP------------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLG 444 (559)
T ss_dssp CC-CCC------------------------GGGCEEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEE
T ss_pred Cc-cCC------------------------CCceEEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEe
Confidence 11 110 112245554 5688889999965 45 899999999999999
Q ss_pred ecC---------CCCCc-ccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecccccc
Q 008038 488 RGE---------GKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 557 (580)
Q Consensus 488 ~~~---------g~~~~-~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~ 557 (580)
++. |.|++ .+...+|+.+|.|||||.|++++|++|||++||||.|||||||++|++.|||++|.|+++++
T Consensus 445 ~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~ 524 (559)
T 2q9o_A 445 RSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL 524 (559)
T ss_dssp ESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHH
T ss_pred cccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchh
Confidence 987 77765 23466889999999999999999999999999999999999999999999999999998877
Q ss_pred cCC-----Cc-cccccCCCCc
Q 008038 558 GNI-----PN-QALACGLTGK 572 (580)
Q Consensus 558 ~~~-----p~-~~~~c~~~~~ 572 (580)
+++ |+ ..+.|+.|+.
T Consensus 525 ~~~~~~~~p~~~~~~C~~~~~ 545 (559)
T 2q9o_A 525 RQRISQEDEDDFNRVCDEWRA 545 (559)
T ss_dssp GGGCCHHHHHHHHHHHHHHHH
T ss_pred hhccccCCchhhhhhcccccc
Confidence 653 33 3589998876
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-90 Score=747.39 Aligned_cols=462 Identities=30% Similarity=0.563 Sum_probs=361.8
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC-----CceeeeeccccccCCCCCCCCCCCc
Q 008038 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-----EGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~-----~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.|+|++++..+++||.++.+|+|||++ ||+||+++||+|+|+|+|+ ++ ++++|||||+++.+++++||+|+++
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~-l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVND-LDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEEC-CCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeC-CCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 599999999999999999999999999 9999999999999999999 45 9999999999998889999999999
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC---cceEEEEeecccCchHHHHhh
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD---GEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d---~e~~l~~~d~~~~~~~~~~~~ 183 (580)
||+|+||++|+|+|++ +++||||||||...|+.+||+|+|||+++.+ ..+..|| +|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ-- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC--
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc--
Confidence 9999999999999995 8999999999999999999999999998754 2233343 6899999999998765421
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
. ...++.++|||+....|.. ....+.++|++|++|||||||+|..+.+.|+|+||
T Consensus 161 ----~---~~~~d~~liNG~~~~~~~~------------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh 215 (503)
T 1hfu_A 161 ----G---AAQPDATLINGKGRYVGGP------------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGH 215 (503)
T ss_dssp ----------CCSEEEETTBCCBTTCC------------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTC
T ss_pred ----C---CCCCCEEEECcccccCCCC------------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCc
Confidence 1 1357999999999875532 22346899999999999999999999999999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC------CCCCceEEEEecCCCCCCCCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPL 337 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~ 337 (580)
+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+|||++.....+. ......++|+|.+.....+..
T Consensus 216 ~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~ 294 (503)
T 1hfu_A 216 ELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT 294 (503)
T ss_dssp CEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC
T ss_pred eEEEEeccCccccccccCeEEEcccceEEEEEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC
Confidence 999999999999999999999999999999999987 5689999998653221 112346999998643321111
Q ss_pred CCCCCCCCCCCCCccccccccccccCC--CCC--CCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccC
Q 008038 338 SPPPITPRWDDYDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 413 (580)
Q Consensus 338 ~~~p~~p~~~~~~~~~~~~~~~~~~~~--~~~--~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~ 413 (580)
.. .|....+. . ..+..... .+. .+...++++.+.... ++. .|+|||++|..+..|.|.+...+
T Consensus 295 ~~---~~~~~~l~---~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~g- 361 (503)
T 1hfu_A 295 SA---NPNPAQLN---E--ADLHALIDPAAPGIPTPGAADVNLRFQLGF---SGG-RFTINGTAYESPSVPTLLQIMSG- 361 (503)
T ss_dssp CC---CSSCCBCC---G--GGCBBSSSCSCSSCSSTTCSSEEEECCEEE---ETT-EEEETTBCCCCCSSCHHHHHHTT-
T ss_pred CC---CCccCCCc---c--ccccccCccCCCCcccCCcceEEEEEEeec---cCc-eEEECCCccCCCCCcchhhhhcC-
Confidence 11 11111111 0 11111111 111 111334444433221 122 79999999999888887766422
Q ss_pred CccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEc-CCCCCCCCCCCCCeeecCCCeEEEeecCCC
Q 008038 414 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN-ANAIRPNLSEIHPWHLHGHDFWVLGRGEGK 492 (580)
Q Consensus 414 ~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N-~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~ 492 (580)
.+. +. ....++.++.++.|++|+++++| .+.+ .||||||||+|+|++++.+.
T Consensus 362 --~~~----~~---------------~~~~~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 362 --AQS----AN---------------DLLPAGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp --CCS----GG---------------GSSSTTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC
T ss_pred --Ccc----cc---------------cCCCCceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC
Confidence 110 00 11234457999999999999994 5555 89999999999999986542
Q ss_pred CCcccccccCCCCCCccceEEe-CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccccccc---CCCc-ccccc
Q 008038 493 FTKEDEKKFNLKNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPN-QALAC 567 (580)
Q Consensus 493 ~~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~---~~p~-~~~~c 567 (580)
.+|+.+|.||||+.| ++++|++|||++||||.|+|||||++|++.|||++|.+++++++ .+|+ ..+.|
T Consensus 415 -------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 415 -------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLC 487 (503)
T ss_dssp -------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHH
T ss_pred -------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhc
Confidence 357788999999999 99999999999999999999999999999999999999887664 3454 46899
Q ss_pred CCCCc
Q 008038 568 GLTGK 572 (580)
Q Consensus 568 ~~~~~ 572 (580)
+.|..
T Consensus 488 ~~~~~ 492 (503)
T 1hfu_A 488 EIYDD 492 (503)
T ss_dssp HHHHT
T ss_pred cchhh
Confidence 88764
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-83 Score=684.98 Aligned_cols=404 Identities=27% Similarity=0.387 Sum_probs=323.9
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
+.+.+++|+|++++..++++|.++.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~-- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENR-LPEPTNLHWHGLPIS--PKVDDPF-- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEEC-SSSCBCCEEETCCCC--TTTSCTT--
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEEC-CCCCcceEeCCCCCC--ccccCCc--
Confidence 45678999999999999999999999999999999999999999999999999 689999999999986 5999985
Q ss_pred ccccCCCCCeEEEEEEc--CCCcceeeecCc----chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHH
Q 008038 107 SQCPINPGETYLYRFKV--DKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQ 180 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~--~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~ 180 (580)
+.|+||++|+|+|++ +++||||||||. +.|+.+||+|+|||+++.+......+++|++|+++||+++... .
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-P 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-E
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-c
Confidence 469999999999998 489999999995 5799999999999998754222245688999999999987631 0
Q ss_pred HhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 181 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
. ............++.++|||+..+ .++|++| +|||||||+|..+.+.|+|
T Consensus 164 ~-~~~~~~~~~g~~~~~~~iNG~~~p---------------------------~l~v~~g-~~RlRliN~~~~~~~~~~i 214 (439)
T 2xu9_A 164 A-PHTPMDWMNGKEGDLVLVNGALRP---------------------------TLVAQKA-TLRLRLLNASNARYYRLAL 214 (439)
T ss_dssp C-CCCHHHHHHCCCCSEEEETTEESC---------------------------EEECSSS-EEEEEEEECCSSCCEEEEE
T ss_pred C-CCCccccccCCCCCEEEECCccCC---------------------------cEEecCC-eEEEEEEecCCCceEEEEE
Confidence 0 000000000125789999999876 7999999 9999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-----------------CCCCce
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-----------------ATPPAL 322 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~-----------------~~~~~~ 322 (580)
+||+|+|||.||+++ +|+.++++.|+|||||||+|++++ +|+|+|++.....+. ......
T Consensus 215 ~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (439)
T 2xu9_A 215 QDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETL 292 (439)
T ss_dssp TTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEE
T ss_pred CCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC--CceEEEEecccccCCccccccccccccccCCCCCccee
Confidence 999999999999998 899999999999999999999987 789999997544321 112456
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCC
Q 008038 323 TLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPP 402 (580)
Q Consensus 323 ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~ 402 (580)
++++|.+.... .+ +|.. +....+.. .+ ..+|++.+.... . + ..|.|||++|..+.
T Consensus 293 ~~l~~~~~~~~----~~---~p~~------------l~~~~~l~-~~-~~~r~~~l~~~~--~-g-~~~~iNg~~~~~~~ 347 (439)
T 2xu9_A 293 LYLIAPKNPKP----LP---LPKA------------LSPFPTLP-AP-VVTRRLVLTEDM--M-A-ARFFINGQVFDHRR 347 (439)
T ss_dssp EEEEECSSCCC----CC---CCSC------------CCCCCCCC-CC-SEEEEEEEEEEG--G-G-TEEEETTBCCCTTC
T ss_pred EEEEecCCCcc----cc---Cccc------------CCCcccCC-CC-CcceEEEEEeec--c-C-ceEeECCEECCCCC
Confidence 78888753211 11 1110 00000001 11 224677666542 1 1 37999999874321
Q ss_pred CCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCC
Q 008038 403 TPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 482 (580)
Q Consensus 403 ~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~ 482 (580)
++ ..++.|++++|+|+|.+.+ .||||||||+
T Consensus 348 -------------------~~------------------------~~~~~g~~~~~~~~N~~~~------~HP~HLHG~~ 378 (439)
T 2xu9_A 348 -------------------VD------------------------LKGQAQTVEVWEVENQGDM------DHPFHLHVHP 378 (439)
T ss_dssp -------------------CC------------------------EEECTTCEEEEEEEECSSS------CEEEEESSCC
T ss_pred -------------------Cc------------------------eecCCCCEEEEEEEcCCCC------CCCceeCCCc
Confidence 11 6788999999999998877 8999999999
Q ss_pred eEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 483 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 483 F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+|++++.+.+ .+|.||||+.|+|+++++|||++||||.|+|||||++|++.|||++|.++
T Consensus 379 F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 379 FQVLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BEEEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999865433 36899999999999999999999999999999999999999999999874
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-82 Score=680.13 Aligned_cols=403 Identities=19% Similarity=0.215 Sum_probs=318.7
Q ss_pred eEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 31 TRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++.+ .+||+| ||
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~~--~~DG~~---~~ 91 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNR-LTENVSMTVAGLQVPG--PLMGGP---AR 91 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCCG--GGSCSG---GG
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEEC-CCCCccEEECCccCCC--CCCCCC---cC
Confidence 578999999999987 8999999999999999999999999999999999 6899999999999975 499998 99
Q ss_pred cCCCCCeEEEEEEcC-CCcceeeecCc----chhhccccEEEEEEEcCCCCCC--CCCC-CcceEEEEeecccCchHHHH
Q 008038 110 PINPGETYLYRFKVD-KAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~-~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~--p~~~-d~e~~l~~~d~~~~~~~~~~ 181 (580)
+|+||++|+|+|++. ++||||||||. +.|+.+||+|+|||+++.+... |..| ++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 999999999999996 59999999997 7899999999999998765322 3344 78999999999997654432
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV- 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i- 260 (580)
... .... ...++.++|||+..+ .+++++| +|||||||+|..+.+.|+|
T Consensus 172 ~~~--~~~~-~~~~d~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~ 220 (451)
T 2uxt_A 172 YNE--PGSG-GFVGDTLLVNGVQSP---------------------------YVEVSRG-WVRLRLLNASNSRRYQLQMN 220 (451)
T ss_dssp CCC--CSSS-CCCCSEEEETTEESC---------------------------EEEECSS-EEEEEEEECCSSCCEEEEET
T ss_pred ccc--ccCC-CCcCCEEEECCcccc---------------------------eEEecCC-EEEEEEEccCCceeEEEEEC
Confidence 211 1111 346899999999877 7999999 9999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----------CCCCceEEEEecC
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----------ATPPALTLLNYHP 329 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----------~~~~~~ail~y~~ 329 (580)
+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ +++|+|++.....+. ......++++|..
T Consensus 221 dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 298 (451)
T 2uxt_A 221 DGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRP 298 (451)
T ss_dssp TSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEE
T ss_pred CCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEe
Confidence 899999999999988 899999999999999999999986 689999987543211 1233467888875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhh
Q 008038 330 TSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 409 (580)
Q Consensus 330 ~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~ 409 (580)
......... .+|. .+..... .+.+...++++.+. + .|+|||++|..+.
T Consensus 299 ~~~~~~~~~---~~p~------------~L~~~~~-~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~------- 346 (451)
T 2uxt_A 299 TGLLPLVTD---SLPM------------RLLPTEI-MAGSPIRSRDISLG-------D--DPGINGQLWDVNR------- 346 (451)
T ss_dssp CSCCC-------CCCS------------CSSSSCC-CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC-------
T ss_pred cCCCcCccc---cCcc------------ccCCCCC-CCCCCcceEEEEEe-------e--EEEECCEeCCCCC-------
Confidence 432211111 1111 0111111 11122234444432 1 5889998874321
Q ss_pred hccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeec
Q 008038 410 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 489 (580)
Q Consensus 410 ~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~ 489 (580)
+ .+.++.|++|+|+|+|. + .||||||||+|+|++++
T Consensus 347 ------------~------------------------~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~~ 382 (451)
T 2uxt_A 347 ------------I------------------------DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNVN 382 (451)
T ss_dssp ------------C------------------------CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEET
T ss_pred ------------C------------------------cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEeeC
Confidence 0 17789999999999997 4 79999999999999985
Q ss_pred CCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCcee----eEEeeecchhhhcccEEEEeccccccc
Q 008038 490 EGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETVG 558 (580)
Q Consensus 490 ~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~----w~~HCHil~H~d~GM~~~~~~~~~~~~ 558 (580)
+. .+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|.+.+.++.
T Consensus 383 G~--------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 383 GA--------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp TB--------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred Cc--------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 32 234567899999999 999999999999888 999999999999999999999876654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-80 Score=671.43 Aligned_cols=434 Identities=19% Similarity=0.213 Sum_probs=324.6
Q ss_pred ceEEEEEEEEEE--EeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCc
Q 008038 30 KTRHYKWEVEYM--FWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 30 ~~~~~~l~~~~~--~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
.+++|+|++++. .+.+||..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||++
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~~--- 108 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINN-AEAPNSVHLHGSFSR--AAFDGWA--- 108 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEEC-SSSCBCEEEETCCCC--TTTTTCS---
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEEC-CCCCceEEECCCcCC--CCCCCCC---
Confidence 457899999964 46799999999999999999999999999999999999 789999999999986 4799986
Q ss_pred cccCCCCCeEEEEEEcC-CCcceeeecCcc----hhhccccEEEEEEEcCCCCCCCCC--C-CcceEEEEeecccCchHH
Q 008038 108 QCPINPGETYLYRFKVD-KAGTYFYHGHLG----MQRSAGLYGSLIVDVADGEKEPFH--Y-DGEFNLLLSDWWHRSVHE 179 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~p~~--~-d~e~~l~~~d~~~~~~~~ 179 (580)
||+|+||++|+|+|++. ++||||||||.. .|+.+||+|+|||+++.+...++. | ++|++|+++||+++...+
T Consensus 109 ~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~ 188 (534)
T 3abg_A 109 EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGN 188 (534)
T ss_dssp SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSC
T ss_pred CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCc
Confidence 89999999999999994 579999999964 578899999999999876443333 2 678999999999876543
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
+... .+......++.++|||+.++ .+.+++ ++|||||||+|..+.+.|+
T Consensus 189 ~~~~---~~~~~~~~gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~l~ 237 (534)
T 3abg_A 189 LVTT---NGELNSFWGDVIHVNGQPWP---------------------------FKNVEP-RKYRFRFLDAAVSRSFGLY 237 (534)
T ss_dssp BCCC---TTCSSCCCCSEEEETTEESC---------------------------BCBCCS-SEEEEEEEECCSSCCEEEE
T ss_pred eecc---CCCCccccCceeccCCccCc---------------------------eEEecC-cEEEEEEEecCCcceEEEE
Confidence 3221 11111235789999999877 477877 5999999999999999999
Q ss_pred EeC-------eeeEEEEECCcc-cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC-CCC----CCCCceEEEE
Q 008038 260 VKN-------HKMVVVEADGNY-VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG-RKP----ATPPALTLLN 326 (580)
Q Consensus 260 i~g-------h~~~via~DG~~-v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~-~~~----~~~~~~ail~ 326 (580)
|++ |+|+|||+||.+ .+|+.++++.|+|||||||+|++++.++.+|+|++.... .+. ......++++
T Consensus 238 i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~ 317 (534)
T 3abg_A 238 FADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMR 317 (534)
T ss_dssp ECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEE
T ss_pred EecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEE
Confidence 987 999999999985 589999999999999999999998743446999874321 111 1224468899
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcc
Q 008038 327 YHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYL 406 (580)
Q Consensus 327 y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l 406 (580)
|....... .......|. .+.... .+.++...++++.+... ...|+|||++|..+..|.
T Consensus 318 ~~~~~~~~--~~~~~~~P~------------~L~~~~-~p~~~~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~- 375 (534)
T 3abg_A 318 FVVADDTT--QPDTSVVPA------------NLRDVP-FPSPTTNTPRQFRFGRT------GPTWTINGVAFADVQNRL- 375 (534)
T ss_dssp EECCCCSS--CSCCCCCCC------------CCCCCS-CCCCCCCCCEEEECSCC------CSTTCCCCBTTBCTTSCC-
T ss_pred EecCCCCc--CCCCCCCcc------------ccccCC-CCCCccccceEEEEecc------CceeEECCcccCCCCCcc-
Confidence 87433210 000001111 011100 01122234565554321 125899999885432221
Q ss_pred hhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCCCeEE
Q 008038 407 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWV 485 (580)
Q Consensus 407 ~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~~F~v 485 (580)
...++.|++++|+|+|.+ .+ .||||||||+|+|
T Consensus 376 ----------------------------------------l~~v~~G~~~~w~i~N~~~~~------~HP~HLHG~~F~V 409 (534)
T 3abg_A 376 ----------------------------------------LANVPVGTVERWELINAGNGW------THPIHIHLVDFKV 409 (534)
T ss_dssp ----------------------------------------CCEECTTCEEEEEEEECSSSC------CCCEEESSCCEEE
T ss_pred ----------------------------------------eeeccCCCEEEEEEEcCCCCC------CcCEEECCeeEEE
Confidence 156789999999999976 35 8999999999999
Q ss_pred EeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE-ecCceeeEEeeecchhhhcccEEEEecccccccCCCc--
Q 008038 486 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPN-- 562 (580)
Q Consensus 486 v~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~-- 562 (580)
++++.|.+.. ...++.+ .|||||.|+|+++++|||+ +||||.|||||||++|++.|||+.|.+...+-..+|+
T Consensus 410 l~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~ 485 (534)
T 3abg_A 410 ISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATV 485 (534)
T ss_dssp EEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSCCSSTTTTS
T ss_pred EEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEeccccCCCCcc
Confidence 9996554321 1234445 8999999999999999999 8999999999999999999999999876543111121
Q ss_pred -cccccCCCCc
Q 008038 563 -QALACGLTGK 572 (580)
Q Consensus 563 -~~~~c~~~~~ 572 (580)
..+.|..|+.
T Consensus 486 ~~~p~~~~w~~ 496 (534)
T 3abg_A 486 FVDPMEELWQA 496 (534)
T ss_dssp CSSSSSCCCSS
T ss_pred cCCCCCccccc
Confidence 1245666665
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-79 Score=650.92 Aligned_cols=409 Identities=25% Similarity=0.381 Sum_probs=314.6
Q ss_pred cCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~-l~~~tsiHwHGl~~~--~~~DG~p- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNK-LKEATTIHWHGVPVP--PDQDGSP- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--GGGSCCT-
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeC-CCCCeeEEecCcccC--CccCCCc-
Confidence 5778899999999999995 7999999999999999999999999999999999 789999999999985 6899997
Q ss_pred CccccCCCCCeEEEEEEcCC--CcceeeecCc----chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHH
Q 008038 106 ISQCPINPGETYLYRFKVDK--AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHE 179 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~--~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~ 179 (580)
||+|+||++|+|+|++.+ +||||||||. +.|+.+||+|+|||+++.+. ++.++.++ |+++||+++...+
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~--~~~~~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA--LSHLKEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT--TTTSEEEE-EEEEEECCBTTSC
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc--ccCCCcee-EEEEEEeccCCCc
Confidence 899999999999999955 8999999995 68999999999999997653 34445565 9999999876433
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
........... ...++.++|||+..+ .+++++|+ ||||||+|..+.+.|+
T Consensus 197 ~~~~~~~~~~~-g~~gd~~lvNG~~~p---------------------------~l~v~~g~--RlRliNa~~~~~~~l~ 246 (481)
T 3zx1_A 197 IPNNNLNDWLN-GREGEFVLINGQFKP---------------------------KIKLATNE--RIRIYNATAARYLNLR 246 (481)
T ss_dssp CCCCCHHHHHH-CCCCSEEEETTEESC---------------------------EEEEETTE--EEEEEECCSSCCEEEE
T ss_pred cccccchhhcc-CCcCCEEEECCccCc---------------------------eEEecCCC--EEEEEecCCCeEEEEE
Confidence 21000000000 225789999999876 79999998 9999999999999999
Q ss_pred EeCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCCCCCC
Q 008038 260 VKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASK 334 (580)
Q Consensus 260 i~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~~~~~ 334 (580)
|+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ +++|.|.+....... .......++++......
T Consensus 247 i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 323 (481)
T 3zx1_A 247 IQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN- 323 (481)
T ss_dssp ETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-
T ss_pred ECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCCC-
Confidence 9999999999998766 899999999999999999999987 778988775433211 12233445554422110
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecC-----Ce--------EEEEEcceeccCC
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-----GF--------TKWAINNVSLTLP 401 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~-----~~--------~~~~iNg~~~~~p 401 (580)
. .+|. .+..... .+.+ ..+|++.|........ +. ..|+|||+.|..
T Consensus 324 ---~---~lP~------------~l~~~~~-~~~~-~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~- 382 (481)
T 3zx1_A 324 ---V---ELPK------------NLKIFKP-SEEP-KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL- 382 (481)
T ss_dssp ---C---CCCS------------CSCCCCC-CCCC-CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-
T ss_pred ---c---cCCc------------cccCCCC-CCCC-CcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-
Confidence 1 1111 0000000 1111 2345555543211000 00 139999987621
Q ss_pred CCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCC
Q 008038 402 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 481 (580)
Q Consensus 402 ~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~ 481 (580)
+++. +.++.|++|+|+|.|.+.+ .|||||||+
T Consensus 383 ------------------~~~~------------------------~~~~~G~~v~w~l~N~~~~------~Hp~HlHG~ 414 (481)
T 3zx1_A 383 ------------------KRID------------------------LSSKLGVVEDWIVINKSHM------DHPFHIHGT 414 (481)
T ss_dssp ------------------TCCC------------------------EEEETTCCEEEEEEECSSS------CEEEEETTC
T ss_pred ------------------CCce------------------------EEeCCCCEEEEEEEcCCCC------ceeEEEecc
Confidence 1111 7889999999999998877 999999999
Q ss_pred CeEEEeec-CCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 482 DFWVLGRG-EGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 482 ~F~vv~~~-~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
.|+|+++. .|. .....++.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||+.|.|.
T Consensus 415 ~F~vl~~~~~g~-------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 415 QFELISSKLNGK-------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CEEEEEEEETTE-------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEEEEEecccCC-------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 99999983 121 111235789999999999999999999999999999999999999999999874
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-78 Score=657.29 Aligned_cols=425 Identities=20% Similarity=0.271 Sum_probs=316.6
Q ss_pred ceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCC---------------------Ccee
Q 008038 30 KTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT---------------------EGVV 86 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~---------------------~~~s 86 (580)
...+|+|++++.... +++..+.+|+|||++|||+||+++||+|+|+|+|+|.. .+++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 345699999987754 66779999999999999999999999999999999532 2899
Q ss_pred eeeccccccCCCCCCCCCC--CccccCCCCCeE---EEEEEc-CCCcceeeecCcc----hhhccccEEEEEEEcCCCCC
Q 008038 87 IHWHGIRQLGTPWADGTAS--ISQCPINPGETY---LYRFKV-DKAGTYFYHGHLG----MQRSAGLYGSLIVDVADGEK 156 (580)
Q Consensus 87 iH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~---~y~f~~-~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~ 156 (580)
|||||+++. +++||+|+ ++||+|+||++| +|+|++ +++||||||||.. .|+.+||+|+|||+++.+..
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999986 68999996 689999999555 999998 6899999999964 48899999999999976533
Q ss_pred CCC-CCCcceEEEEeecccCchHHHHhhhcC----C-----CCCCCCCCceEEeCccCCCCccccccccCCCcccccccC
Q 008038 157 EPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS----R-----PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 226 (580)
Q Consensus 157 ~p~-~~d~e~~l~~~d~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~ 226 (580)
.++ .+|+|++|+++||+++...++...... . .......+++++|||+.++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p-------------------- 241 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-------------------- 241 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC--------------------
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc--------------------
Confidence 222 358899999999998765443221100 0 0001235799999999987
Q ss_pred CCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe-eeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcc
Q 008038 227 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYN 304 (580)
Q Consensus 227 ~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~ 304 (580)
.+++++ ++|||||||+|..+.+.|+|++| +|+|||+||.++ +|+.++++.|+|||||||+|++++. +|+
T Consensus 242 -------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~ 312 (513)
T 2wsd_A 242 -------YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGE 312 (513)
T ss_dssp -------EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTC
T ss_pred -------eEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCC-CCc
Confidence 688887 58999999999999999999999 999999999998 8999999999999999999999873 455
Q ss_pred -eEEEEeecCCCC---CCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEe
Q 008038 305 -YWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLN 380 (580)
Q Consensus 305 -y~l~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~ 380 (580)
+.+.. ...+. ......++++|........+. ....|.. +.. . ... +......+|++.+..
T Consensus 313 ~~~l~~--~~~~~~~~~~~~~~~il~~~~~~~~~~~~--~~~~p~~--l~~-------~-~~~--~~~~~~~~~~~~l~~ 376 (513)
T 2wsd_A 313 SIILAN--SAGCGGDVNPETDANIMQFRVTKPLAQKD--ESRKPKY--LAS-------Y-PSV--QHERIQNIRTLKLAG 376 (513)
T ss_dssp EEEEEE--CCCSSSSCCTTTTTEEEEEECCSCCSSCC--CCCCCSB--CSC-------C-GGG--CCCCEEEEEEEEEEE
T ss_pred EEEEEe--cccccccCCCCCCcceEEEEeccCcccCc--cCCCCcc--ccC-------C-CCc--ccCCCcceEEEEEEe
Confidence 33333 22221 122446888987432111110 0111110 000 0 000 111123356666554
Q ss_pred eeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEE
Q 008038 381 TQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVIL 460 (580)
Q Consensus 381 ~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l 460 (580)
.... .+...|.|||++|..+. .+.++.|++|+|+|
T Consensus 377 ~~~~-~g~~~~~iNg~~~~~~~--------------------------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 377 TQDE-YGRPVLLLNNKRWHDPV--------------------------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp EECT-TSCEEEEETTBCTTSCC--------------------------------------------CBCCBTTCEEEEEE
T ss_pred ecCC-CCCceEeECCccCCCcc--------------------------------------------cEecCCCCEEEEEE
Confidence 3322 24457899999873210 15678999999999
Q ss_pred EcCCCCCCCCCCCCCeeecCCCeEEEeecCC---CCCcccccccCCC---------CCCccceEEeCCCcEEEEEEEe-c
Q 008038 461 QNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTKEDEKKFNLK---------NPPLKNTAVIFPYGWTALRFVA-D 527 (580)
Q Consensus 461 ~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g---~~~~~~~~~~~~~---------~p~~rDTv~vpp~g~v~irf~a-d 527 (580)
+|.+.+ .||||||||+|+|++++.. .|++. ..+++. ++.||||+.|+|+++++|+|++ |
T Consensus 412 ~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~d 483 (513)
T 2wsd_A 412 INPTRG------THPIHLHLVSFRVLDRRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGP 483 (513)
T ss_dssp EECSSS------CEEEEESSCCEEEEEEEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCS
T ss_pred EcCCCC------CcCEeEeCceEEEEEecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecC
Confidence 998877 8999999999999998652 12110 112222 3469999999999999999998 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
|||.|||||||++|++.|||++|.+.+
T Consensus 484 npG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 484 YSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp CCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 999999999999999999999998865
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-79 Score=649.77 Aligned_cols=389 Identities=23% Similarity=0.349 Sum_probs=303.4
Q ss_pred eEEEEEEEEEEEeCCCCceeEEEEEcCC-CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 31 TRHYKWEVEYMFWSPDCKESIVMGINGQ-FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~-~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||+|+ |
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~~~---~ 79 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNK-LTEPTIVHWHGFDVN--WHNDAHPS---F 79 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEEC-SSSCBCEEEETCCCC--HHHHTCGG---G
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEEC-CCCceeEEeCCccCC--CccCCCCC---c
Confidence 45677776 999999 999999999999999999999 789999999999985 57999986 9
Q ss_pred cCCCCCeEEEEEEcC-CCcceeeecC----cchhhccccEEEEEEEcCCCCCCCCCCC-cceEEEEeecccCchHHHHhh
Q 008038 110 PINPGETYLYRFKVD-KAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~-~~Gt~wYH~H----~~~~~~~Gl~G~liV~~~~~~~~p~~~d-~e~~l~~~d~~~~~~~~~~~~ 183 (580)
+|+||++|+|+|++. ++|||||||| ++.|+.+||+|+|||+++.+. .++.|| +|++|+++||+++. .++..
T Consensus 80 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~- 156 (448)
T 3aw5_A 80 AITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY- 156 (448)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-
T ss_pred cCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-
Confidence 999999999999995 8999999999 789999999999999998764 445677 89999999999976 43221
Q ss_pred hcC-CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE--
Q 008038 184 LSS-RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-- 260 (580)
Q Consensus 184 ~~~-~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i-- 260 (580)
+.. ........++.++|||+..+ .+++++| +|||||||+|..+.+.|+|
T Consensus 157 ~~~~~~~~~~~~~~~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~ 208 (448)
T 3aw5_A 157 NPTPMEMIAGFLGNAVLVNGVKDA---------------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVK 208 (448)
T ss_dssp CCCHHHHHHCCCCSEEEETTEETC---------------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEE
T ss_pred cccccccccCccccEEEECCcccc---------------------------eEEECCC-eEEEEEEcCCCcceEEEEEEc
Confidence 100 00000236799999999876 7999999 9999999999999999999
Q ss_pred eC---eeeEEEEECCcccC-ceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-------------CCCCceE
Q 008038 261 KN---HKMVVVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-------------ATPPALT 323 (580)
Q Consensus 261 ~g---h~~~via~DG~~v~-P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~-------------~~~~~~a 323 (580)
+| |+|+|||+||++++ |+.++++.|+|||||||+|++++ +.|+|++.....+. ......+
T Consensus 209 ~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 285 (448)
T 3aw5_A 209 KNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIA 285 (448)
T ss_dssp TTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEE
T ss_pred CCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEE
Confidence 99 99999999999997 99999999999999999999983 58999987644321 1123456
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCC
Q 008038 324 LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPT 403 (580)
Q Consensus 324 il~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~ 403 (580)
+++|.+...... +..++. + .. ...+...+|++.+... ...|+|||++|..+.
T Consensus 286 ~~~~~~~~~~~~----p~~L~~-------------l---p~-~~~~~~~~~~~~l~~~------~~~~~iNg~~~~~~~- 337 (448)
T 3aw5_A 286 TFLVEGKGEAVP----VEALSD-------------P---PP-EPPKPTRTRRFALSLS------GMQWTINGMFWNASN- 337 (448)
T ss_dssp EEEEEEECCCCC----CCCCSC-------------C---CC-CCCCCSEEEEEEEEEE------TTEEEETTBCCCTTC-
T ss_pred EEEEcCCCCCCC----ccccCC-------------C---CC-CCCCCCceEEEEEeCC------CceeeECCCcCCCCC-
Confidence 777864322111 111110 0 00 1112234566665432 125999999874311
Q ss_pred CcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEE-ccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCC
Q 008038 404 PYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM-LGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGH 481 (580)
Q Consensus 404 p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~ 481 (580)
| .+. ++.|++|+|+|+|.+ .+ .||||||||
T Consensus 338 -------------------p-----------------------~~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~ 369 (448)
T 3aw5_A 338 -------------------P-----------------------LFEHVSVEGVELWEIVNDKASM------PHPMHLHGF 369 (448)
T ss_dssp -------------------T-----------------------TCCCEEECEEEEEEEEECSSSC------CEEEEESSS
T ss_pred -------------------C-----------------------ceeccCCCCeEEEEEEcCCCCC------CcCEEECCc
Confidence 0 044 788999999999987 66 899999999
Q ss_pred CeEEEeecCCCCCc-cccccc----CCCCCCccceEEeCCCcEEEEE--EE---ecCceeeEEeeecchhhhcccEEEEe
Q 008038 482 DFWVLGRGEGKFTK-EDEKKF----NLKNPPLKNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLA 551 (580)
Q Consensus 482 ~F~vv~~~~g~~~~-~~~~~~----~~~~p~~rDTv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~ 551 (580)
+|||++++ |.+.. .+...+ ++.++.||||+.|+|+++++|+ |+ +||| |||||||++|++.|||++|.
T Consensus 370 ~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~ 446 (448)
T 3aw5_A 370 PMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIA 446 (448)
T ss_dssp CBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEE
T ss_pred eEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEE
Confidence 99999984 44431 111112 3345579999999999999665 88 8999 99999999999999999997
Q ss_pred c
Q 008038 552 L 552 (580)
Q Consensus 552 ~ 552 (580)
+
T Consensus 447 V 447 (448)
T 3aw5_A 447 V 447 (448)
T ss_dssp E
T ss_pred e
Confidence 6
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-76 Score=661.28 Aligned_cols=444 Identities=19% Similarity=0.245 Sum_probs=301.2
Q ss_pred CCceEEEEEEEEEEEe--CCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCC----------------------
Q 008038 28 GSKTRHYKWEVEYMFW--SPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE---------------------- 83 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~---------------------- 83 (580)
....+.|+|++++.+. .+++..+.+|+|||++|||+|+|++||+|+|+|+|+| ++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L-~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRI-PKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECC-CTTCCCSEEEEEECCCSTTSCCGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECC-CCCcccccccccccCCCCCCcccc
Confidence 3445678888887664 4777889999999999999999999999999999995 33
Q ss_pred -------------------ceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecCc----chhh
Q 008038 84 -------------------GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHL----GMQR 139 (580)
Q Consensus 84 -------------------~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~----~~~~ 139 (580)
.++|||||+++. +++||++ ||+|+||++|+|+|++ +++||||||||. +.|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccC--CcccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 478899999885 6889976 9999999999999999 567999999995 6899
Q ss_pred ccccEEEEEEEcCCCCCCCC-CCCcceEEEEeecccCchHHHHhhhc---------C---C---CCCCCCCCceEEeCcc
Q 008038 140 SAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLS---------S---R---PLRWIGEPQTLLINGR 203 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~~~d~~~~~~~~~~~~~~---------~---~---~~~~~~~~~~~liNG~ 203 (580)
.+||+|+|||+++.+...++ .+|+|++|+|+||+++...+...... . . ........+.++|||+
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred hccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 99999999999877654444 35899999999998865433221100 0 0 0001234688999999
Q ss_pred CCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe-------eeEEEEECCccc-
Q 008038 204 GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH-------KMVVVEADGNYV- 275 (580)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~v- 275 (580)
.++ .+.++ +++|||||||+|..+.+.|+|++| +|+|||+||.++
T Consensus 263 ~~p---------------------------~~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~ 314 (612)
T 3gyr_A 263 IWP---------------------------YADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLP 314 (612)
T ss_dssp ESC---------------------------EEEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEE
T ss_pred ccc---------------------------eEecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccc
Confidence 877 57775 568999999999999999999998 599999999988
Q ss_pred Cceee------eeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC------CCCCceEEEEecCCCCCCCCCCCCCCC
Q 008038 276 QPFEV------DDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPIT 343 (580)
Q Consensus 276 ~P~~~------d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~------~~~~~~ail~y~~~~~~~~~~~~~p~~ 343 (580)
+|+.+ ++|.|+|||||||+|++++..+..|++......... .......+++|.............|..
T Consensus 315 ~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (612)
T 3gyr_A 315 RPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEV 394 (612)
T ss_dssp EEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSS
T ss_pred cceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccc
Confidence 46554 589999999999999999843333444433222211 122334666665332221111111111
Q ss_pred CCCCCCC--ccccccccccccCCC-CCCCCCcceEEEEEeeee----------------ecCCeEEEEEcceeccCCCCC
Q 008038 344 PRWDDYD--HSKSFSNKIFALMGS-PKPPTNFHRRLTLLNTQN----------------TINGFTKWAINNVSLTLPPTP 404 (580)
Q Consensus 344 p~~~~~~--~~~~~~~~~~~~~~~-~~~p~~~~r~~~~~~~~~----------------~~~~~~~~~iNg~~~~~p~~p 404 (580)
....... ............... ............+..... .......|.+|+..|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~------ 468 (612)
T 3gyr_A 395 LSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF------ 468 (612)
T ss_dssp CCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC------
Confidence 1000000 000000000000000 000000000000000000 000111222222211
Q ss_pred cchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeE
Q 008038 405 YLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 484 (580)
Q Consensus 405 ~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~ 484 (580)
.....+.++.|++|+|+|+|.+.+ .||||||||+||
T Consensus 469 --------------------------------------~~~~~~~~~~g~~~~w~i~N~~~~------~HP~HLHG~~F~ 504 (612)
T 3gyr_A 469 --------------------------------------NDGLGFTIGEGTHEQWTFLNLSPI------LHPMHIHLADFQ 504 (612)
T ss_dssp --------------------------------------TSCCCEEEETTCEEEEEEEECSSS------CEEEEESSCEEE
T ss_pred --------------------------------------CCCcceEeCCCCEEEEEEEcCCCC------CcCEeECCCcEE
Confidence 111237889999999999999888 899999999999
Q ss_pred EEeecCCCCCc----------------ccccccCCCCCCccceEEeCCCcEEEEEEE-ecCceeeEEeeecchhhhcccE
Q 008038 485 VLGRGEGKFTK----------------EDEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMG 547 (580)
Q Consensus 485 vv~~~~g~~~~----------------~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GM~ 547 (580)
||+++.+.++. ......++.++.|||||.|+++++++|||+ +||||.|||||||++|||.|||
T Consensus 505 Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM 584 (612)
T 3gyr_A 505 VLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMM 584 (612)
T ss_dssp EEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCE
T ss_pred EEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCC
Confidence 99986543322 012235667889999999999999999999 6999999999999999999999
Q ss_pred EEEecccc
Q 008038 548 VVLALGVE 555 (580)
Q Consensus 548 ~~~~~~~~ 555 (580)
+.|.|.+.
T Consensus 585 ~~f~V~~p 592 (612)
T 3gyr_A 585 RPFVVMPP 592 (612)
T ss_dssp EEEEEECH
T ss_pred cceEEeCC
Confidence 99988653
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-77 Score=634.54 Aligned_cols=412 Identities=22% Similarity=0.324 Sum_probs=306.3
Q ss_pred ceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccc
Q 008038 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQC 109 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~ 109 (580)
..++|+|++++.+++++|..+.+|+|||++|||+||+++||+|+|+|+|+ ++++++|||||+++. +++||+| ||
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~-l~~~tsiHwHG~~~~--~~~DG~p---~~ 89 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQ-LTEETTLHWHGLEVP--GEVDGGP---QG 89 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--HHHHCCT---TC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeC-CcCceeEeecccccC--cccCCCC---cC
Confidence 45679999999999999999999999999999999999999999999999 789999999999986 4799997 89
Q ss_pred cCCCCCeEEEEEEcCC-CcceeeecCc----chhhccccEEEEEEEcCCCCC--CCCCC-CcceEEEEeecccCchHHHH
Q 008038 110 PINPGETYLYRFKVDK-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEK--EPFHY-DGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 110 ~i~pG~~~~y~f~~~~-~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~--~p~~~-d~e~~l~~~d~~~~~~~~~~ 181 (580)
+|.||++++|+|++.+ +||||||||. +.|+.+||+|+|||+++.+.. .|..| ..|++|+++||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 9999999999999954 8999999995 689999999999999876533 23344 36899999999997643321
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE-
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV- 260 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i- 260 (580)
.............++.++|||+.++ .+.+ +|++|||||||+|..+.+.|+|
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~p---------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~ 221 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNFATS 221 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSSC---------------------------EEEE-EEEEEEEEEEECCSSCCEEEEET
T ss_pred ccccccccccCCCCCEEEEcCCcCc---------------------------cEec-CCCEEEEEEEccCCCceeeeeec
Confidence 1100000000235789999999877 3555 6789999999999999999999
Q ss_pred eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCCCCCCC
Q 008038 261 KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKI 335 (580)
Q Consensus 261 ~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~~~~~~ 335 (580)
+||+|+|||+||.++ +|+.++++.|+|||||||+|++++ ++.|+|.+....... .......+++.......
T Consensus 222 dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 297 (488)
T 3od3_A 222 DNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS-- 297 (488)
T ss_dssp TCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--
T ss_pred CCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--
Confidence 699999999999987 899999999999999999999997 678998875433221 11122234443321000
Q ss_pred CCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee----------------ec-------------C
Q 008038 336 PLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----------------TI-------------N 386 (580)
Q Consensus 336 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~----------------~~-------------~ 386 (580)
..... |. .+......+......+|++.+..... .. .
T Consensus 298 ~~~~~---P~------------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (488)
T 3od3_A 298 ASGAL---PD------------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGH 362 (488)
T ss_dssp CCCCC---CS------------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCC
T ss_pred CCCCC---Cc------------ccccCCCCcccccccceEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 00000 10 00000000011112345555532100 00 0
Q ss_pred C-e------------EEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCC
Q 008038 387 G-F------------TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 453 (580)
Q Consensus 387 ~-~------------~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 453 (580)
+ + ..|.|||+.|.. .++ .+.++.|
T Consensus 363 g~~~~~~~g~~~~~~~~~~ING~~~~~-------------------~~~------------------------~~~~~~G 399 (488)
T 3od3_A 363 GNMNHMNHGGKFDFHHANKINGQAFDM-------------------NKP------------------------MFAAAKG 399 (488)
T ss_dssp CCCCCSCCCGGGCGGGCEEETTBCCCT-------------------TCC------------------------SEECCBS
T ss_pred CccccccccccccccceeeECCeeCCC-------------------CCC------------------------ceEcCCC
Confidence 0 0 137899887631 111 1788999
Q ss_pred cEEEEEEEcCC-CCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec----C
Q 008038 454 TTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD----N 528 (580)
Q Consensus 454 ~~v~~~l~N~~-~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad----n 528 (580)
++|+|+|.|.+ .+ .|||||||++|+|++++..... ..++.|||||.|+ |+++.|+|+++ +
T Consensus 400 ~~e~w~l~N~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~ 464 (488)
T 3od3_A 400 QYERWVISGVGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPK 464 (488)
T ss_dssp SCEEEEEECTTCCC------CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCG
T ss_pred CEEEEEEEeCCCCC------CccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCC
Confidence 99999999987 56 8999999999999998543221 1245799999999 99999999974 5
Q ss_pred ceeeEEeeecchhhhcccEEEEec
Q 008038 529 PGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 529 pG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
||.|||||||++|+|.|||+.|.|
T Consensus 465 ~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 465 EHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp GGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCEEEeCCchHHHhcCCcEEEEC
Confidence 789999999999999999999975
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-53 Score=434.67 Aligned_cols=269 Identities=26% Similarity=0.408 Sum_probs=228.0
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.+|+|+|++++..+.+ +|..+.+|+|||++|||+||+++||+|+|+|+|. +..+++|||||+++.+++++||+|+++|
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~~~~~~DG~p~~t~ 79 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNM-TTLPHTIHWHGMLQRGTWQSDGVPHATQ 79 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeC-CCCceeEEecCcCCCCCcccCCCccccc
Confidence 3789999999998885 6888999999999999999999999999999999 7899999999999987779999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcchhh---ccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhc
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGMQR---SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 185 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~---~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~ 185 (580)
|+|+||++++|+|+++++||||||||...+. .+||+|+|||+++.....+..+|+|++|+++||++...... .
T Consensus 80 ~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~----~ 155 (318)
T 3g5w_A 80 HAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKP----G 155 (318)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCT----T
T ss_pred ccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeecccccccc----c
Confidence 9999999999999999999999999976543 48999999999875432223568999999999987643211 1
Q ss_pred CCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 186 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
..+.. ...+++++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|
T Consensus 156 ~~~~~-~~~~d~~~ING~~~~~------------------------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f 209 (318)
T 3g5w_A 156 EGGIP-GDVFDYYTINAKSFPE------------------------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHIS 209 (318)
T ss_dssp CCCCT-TCCCCEEEETTBCBTS------------------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCE
T ss_pred cCCCC-CCcCcEEEEcCcCCCC------------------------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEE
Confidence 11111 2257899999998772 1248999999999999999965 79999999999
Q ss_pred EEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC----CCCceEEEEecCCC
Q 008038 266 VVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPTS 331 (580)
Q Consensus 266 ~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~----~~~~~ail~y~~~~ 331 (580)
+||+.||.++ +|..+|++.|.||||+||++++++ +|.|.++|+....... .....++|+|.+..
T Consensus 210 ~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 210 QIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEecCCcccCCCccccEEEECCCCEEEEEEECCC--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999988 799999999999999999999987 8999999997654321 24557899998543
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=425.91 Aligned_cols=268 Identities=25% Similarity=0.451 Sum_probs=226.8
Q ss_pred ceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 30 KTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.+++|+|++++..+.+ +|.++.+|+|||++|||+|+|++||+|+|+|+|. +..+++|||||+++.+++|+||+|+++|
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~-l~~~~siH~HG~~~~~~~~~DGvp~vtq 80 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNN-TSLPHTIHWHGVHQKGTWRSDGVPGVTQ 80 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEE-SSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEEC-CCCCccEEeCCCCcCCCcccCCCCcccc
Confidence 5789999999999886 5999999999999999999999999999999999 6899999999999998888999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcch--hhc-cccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhhc
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGM--QRS-AGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 185 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~--~~~-~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~ 185 (580)
|+|+||++++|+|++.++||||||||... |.. +||+|+|||+++.....+..+|+|++++++||+...... ..
T Consensus 81 ~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~----~~ 156 (339)
T 2zwn_A 81 QPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADK----YG 156 (339)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTC----TT
T ss_pred CccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheecccccc----cC
Confidence 99999999999999999999999999765 777 999999999987653334456899999999998732110 00
Q ss_pred CCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeee
Q 008038 186 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKM 265 (580)
Q Consensus 186 ~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~ 265 (580)
..+.. ...++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||+|
T Consensus 157 ~~g~~-~~~~~~~~ING~~~~~------------------------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f 210 (339)
T 2zwn_A 157 EGGTP-MNVADYFSVNAKSFPL------------------------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDM 210 (339)
T ss_dssp CCCST-TSCCCEEEETTBCTTS------------------------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCE
T ss_pred CCCCC-ccccceEEEccccCCC------------------------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEE
Confidence 00111 1257899999998761 1258999999999999999954 89999999999
Q ss_pred EEEEECCcccC-ceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC----CCCCceEEEEecCC
Q 008038 266 VVVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPT 330 (580)
Q Consensus 266 ~via~DG~~v~-P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----~~~~~~ail~y~~~ 330 (580)
+||+.||.+++ |..+|++.|+||||+||+|++++ +|.|+++|+....+. ......++|+|.+.
T Consensus 211 ~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 211 LVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred EEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 99999999985 88999999999999999999987 789999999765321 23445799999854
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-53 Score=475.48 Aligned_cols=226 Identities=17% Similarity=0.178 Sum_probs=174.3
Q ss_pred CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC--------CccccCCCCCeEE
Q 008038 47 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS--------ISQCPINPGETYL 118 (580)
Q Consensus 47 g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~--------~~q~~i~pG~~~~ 118 (580)
|..+..|+ ++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||+|+ ++||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~-l~~~tsIHwHGl~~~--~~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNM-ASHPVSLHAVGVSYW--KASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECC-SSSCCCCCCSSSCCC--SSSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEEC-CCCCEeEEecCcccC--ccccCCccCCCCcccccccCcCCCCCeEE
Confidence 55555554 8999999999999999999999 789999999999985 34555553 8899999999999
Q ss_pred EEEEcC----------CCcceeeecCcch--hhccccEEEEEEEcCCCCCCCCC-CCcceEEEEee------cccCchHH
Q 008038 119 YRFKVD----------KAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSD------WWHRSVHE 179 (580)
Q Consensus 119 y~f~~~----------~~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~p~~-~d~e~~l~~~d------~~~~~~~~ 179 (580)
|+|++. ++||||||||... |+.+||+|+|||+++........ ..+|++|++++ |+......
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~ 216 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNS 216 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCcccccccccc
Confidence 999983 5799999999765 78999999999999765321111 12888888764 44433211
Q ss_pred HHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEE
Q 008038 180 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNL 258 (580)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~ 258 (580)
...... +..+...++.++|||+... ..+.+++++||+|||||+|++... .|.|
T Consensus 217 ~~~~~~--~~~~~~~~~~~~ING~~~~------------------------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~ 270 (742)
T 2r7e_A 217 LMQDRD--AASARAWPKMHTVNGYVNR------------------------SLPGLIGCHRKSVYWHVIGMGTTPEVHSI 270 (742)
T ss_dssp --------CCSCCCCCCCCEETTBCTB------------------------CCCCCEECSSSCEEEECCCCCSSSCCCCC
T ss_pred ccccCC--CccccccCceEEECCccCC------------------------CCcceEEcCCCEEEEEEEeCCCCCcceEE
Confidence 111111 1112334678999999753 123589999999999999999765 6999
Q ss_pred EEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 259 AVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 259 ~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
||+||.|+|++ ..+|++.|.|||+++|++++++ +|.|+++|+....
T Consensus 271 hlhGh~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~--pG~w~~hCH~~~H 316 (742)
T 2r7e_A 271 FLEGHTFLVRN--------HRQASLEISPITFLTAQTLLMD--LGQFLLFCHISSH 316 (742)
T ss_dssp CCTTCCCEETT--------EECCSCCCCTTCCCEEEECCCS--CSEECCCCCSSSS
T ss_pred EECCCEEEEEe--------EecceEEeCCCcEEEEEEEeCC--CeeEEEEeCChhH
Confidence 99999999974 2478899999999999999987 8999999997654
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=469.95 Aligned_cols=453 Identities=15% Similarity=0.200 Sum_probs=292.4
Q ss_pred cccCCceEEEEEEEEEEEeC--CCCc--------------------------eeEEE-------EEcCC--------CCC
Q 008038 25 TSYGSKTRHYKWEVEYMFWS--PDCK--------------------------ESIVM-------GINGQ--------FPG 61 (580)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~~~--~~g~--------------------------~~~~~-------~~NG~--------~pg 61 (580)
..+.+.+|+|-+.+++..+. |.+. .+.++ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 44568899999999998754 3322 23333 57877 999
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeecccccc----CCCCCCCCCC--CccccCCCCCeEEEEEEcCC----------
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQL----GTPWADGTAS--ISQCPINPGETYLYRFKVDK---------- 125 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~----~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~---------- 125 (580)
|+||+++||+|+|+|+|+ ++++++|||||++++ +.+|+||+++ ++||+|+||++|+|+|++.+
T Consensus 95 P~Ir~~~GD~v~v~v~N~-l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~ 173 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNL-ASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGN 173 (1065)
T ss_dssp CCEEEETTCEEEEEEEEE-SSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCS
T ss_pred CeEEEeCCeEEEEEEEEC-CCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCC
Confidence 999999999999999999 789999999999986 5578899998 89999999999999999955
Q ss_pred CcceeeecCcchh--hccccEEEEEEEcCCCCCCC--CCCCcceEEEEe------ecccCchHHHHh-h---hcCCCCCC
Q 008038 126 AGTYFYHGHLGMQ--RSAGLYGSLIVDVADGEKEP--FHYDGEFNLLLS------DWWHRSVHEQEV-G---LSSRPLRW 191 (580)
Q Consensus 126 ~Gt~wYH~H~~~~--~~~Gl~G~liV~~~~~~~~p--~~~d~e~~l~~~------d~~~~~~~~~~~-~---~~~~~~~~ 191 (580)
+||||||||...+ +.+||+|+|||+++.....| ..+|+|++|+++ ||++........ . .......+
T Consensus 174 aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~ 253 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDF 253 (1065)
T ss_dssp EEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHH
T ss_pred ceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCccccccccccc
Confidence 4999999997654 57999999999998754333 456899999999 566543221110 0 00000000
Q ss_pred CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEE
Q 008038 192 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEA 270 (580)
Q Consensus 192 ~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~ 270 (580)
...+..++|||+.+. ..+.+++++||+|||||+|+|.. ..+.|+|+||+|+
T Consensus 254 ~~~~~~~~iNG~~~~------------------------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~---- 305 (1065)
T 2j5w_A 254 QQSNRMYSVNGYTFG------------------------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT---- 305 (1065)
T ss_dssp HHHTEEEEETTEETT------------------------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE----
T ss_pred cccCcEEEECCccCC------------------------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE----
Confidence 112457999999753 12368999999999999999975 6899999999999
Q ss_pred CCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCC-CCCC
Q 008038 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPR-WDDY 349 (580)
Q Consensus 271 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~-~~~~ 349 (580)
++|+.+|++.|+||||+||+|++++ +|.|+|+|+..... .....+.++|.+..... ..+.|..+. +...
T Consensus 306 ----v~p~~~dtv~I~pGer~dVlv~~~~--pG~y~i~~h~~~h~--~~Gm~~~~~V~~~~~~~--~~~~~~g~~~~~~~ 375 (1065)
T 2j5w_A 306 ----NKNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQNLNHL--KAGLQAFFQVQECNKSS--SKDNIRGKHVRHYY 375 (1065)
T ss_dssp ----ETTEEESEEEECBTCEEEEEEECCS--CEEEEEEECSHHHH--HTTCEEEEEEECSCCCC--CCCCCTTSEEEEEE
T ss_pred ----ECCeeecEEEECCCcEEEEEEEeCC--CeeEEEEecCcchh--hCCCEEEEEEecCCCcc--ccccccccceeEEE
Confidence 3578999999999999999999987 79999999875422 23467888887432211 111111100 0000
Q ss_pred CccccccccccccC-----CCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCC
Q 008038 350 DHSKSFSNKIFALM-----GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 424 (580)
Q Consensus 350 ~~~~~~~~~~~~~~-----~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~ 424 (580)
....+....+.+.. .....+.....+++|.......++.+.-.++ +++.. +.|....+
T Consensus 376 i~A~e~~wdy~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~~~-- 438 (1065)
T 2j5w_A 376 IAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVY-REYTD--------------ASFTNRKE-- 438 (1065)
T ss_dssp EEEEEEEEESCTTSBCTTTCCBTTCTTCTTHHHHCCBTTBCCSEEEEEEE-EEESS--------------TTCCSBCC--
T ss_pred EeceecccccCCCCcccccccccCCCcccchhhhccCCcccCceEeeeee-ecccC--------------CceEEcCc--
Confidence 00000000000000 0000011111111222222223344444444 44421 11211000
Q ss_pred CCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCC
Q 008038 425 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLK 504 (580)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~ 504 (580)
..+.....-.-++++.++.|++++++|+|.... .|+||+||+.|++.+.|. .|.. . .....
T Consensus 439 ---------~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~------~~s~h~hG~~f~~~~~g~-~~~~--~-~~~~~ 499 (1065)
T 2j5w_A 439 ---------RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNKNNEGT-YYSP--N-YNPQS 499 (1065)
T ss_dssp ---------CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS------CBCCEEESSBCCGGGCSB-CCBC--C------
T ss_pred ---------CCcccccccccCceEEEeCCCEEEEEEEECCCC------CccCcccceeeeccCCCc-cccc--c-ccccc
Confidence 000000011123579999999999999998766 899999999999988743 2211 0 00001
Q ss_pred CCCccceEEeCCCcEEEEEEEec---Cce-------eeEEeeecchhhh--cccEEEEec
Q 008038 505 NPPLKNTAVIFPYGWTALRFVAD---NPG-------AWAFHCHIEPHFH--IGMGVVLAL 552 (580)
Q Consensus 505 ~p~~rDTv~vpp~g~v~irf~ad---npG-------~w~~HCHil~H~d--~GM~~~~~~ 552 (580)
+...++...|.||+..+.++... .|| .|+||+|+..=.| .|+.+.+.+
T Consensus 500 ~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGplli 559 (1065)
T 2j5w_A 500 RSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 559 (1065)
T ss_dssp --CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEE
T ss_pred CCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEE
Confidence 23356667778999888888762 565 7999999988766 788888853
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=424.58 Aligned_cols=396 Identities=15% Similarity=0.092 Sum_probs=258.2
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
+...+++++++++...+..+ ..+++|||++ +|+|+|++||+|+|+|+|. ....+++||||... .
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~-~~~~h~~~~~g~~~-----------~ 87 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNG-EGAQHDVVVDQYAA-----------R 87 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECS-SSSCBCCEETTTTE-----------E
T ss_pred CCCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcC-CCCceEEEEccCCc-----------c
Confidence 34456667766654333333 3466999999 9999999999999999999 56669999999642 2
Q ss_pred ccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCCCCCCCCC------cceEEEEeecccCchHHH
Q 008038 107 SQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD------GEFNLLLSDWWHRSVHEQ 180 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p~~~d------~e~~l~~~d~~~~~~~~~ 180 (580)
++|+|+||++++|.|++.++||||||||...|+.+||+|.|+|+++........++ .+++..+ |+.......
T Consensus 88 ~~~~i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~- 165 (447)
T 2dv6_A 88 SAIVNGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVR- 165 (447)
T ss_dssp CCCBCSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEE-
T ss_pred cceecCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEE-
Confidence 48999999999999999889999999999889999999999999876422110110 0111100 111000000
Q ss_pred HhhhcCCCCCC----CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCC-cee
Q 008038 181 EVGLSSRPLRW----IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA-LAS 255 (580)
Q Consensus 181 ~~~~~~~~~~~----~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~-~~~ 255 (580)
..+....... ....+.++|||+. + .+++++++|++|||||+|.+. ...
T Consensus 166 -~~l~~~~~~~~~~~g~~~~~~~~NG~~-p-------------------------gp~i~v~~G~~v~~rl~N~~~~~~~ 218 (447)
T 2dv6_A 166 -IDLETVEVKGQLDDNTTYTYWTFNGKV-P-------------------------GPFLRVRVGDTVELHLKNHKDSLMV 218 (447)
T ss_dssp -EEEEEEEEEEEEETTEEEEEEEETTBB-S-------------------------CCCEEEETTCEEEEEEEECTTCSSC
T ss_pred -EEEEEEEEEEeccCCceeEEEEECCcc-C-------------------------CCeEEecCCCEEEEEEEeCCCCcee
Confidence 0000000000 0124578888874 1 137999999999999999975 245
Q ss_pred EEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC-CCCceEEEEecCCCCCC
Q 008038 256 LNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA-TPPALTLLNYHPTSASK 334 (580)
Q Consensus 256 ~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~-~~~~~ail~y~~~~~~~ 334 (580)
+.++++|. ++.||.+ +++.|.||||+++++++++ +|+||+|++......+ .....+.+.|.+...
T Consensus 219 ~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-- 284 (447)
T 2dv6_A 219 HSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-- 284 (447)
T ss_dssp BCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--
T ss_pred EEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--
Confidence 77777764 3578873 2346999999999999987 7999999985211111 223457777763211
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCC
Q 008038 335 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 414 (580)
Q Consensus 335 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~ 414 (580)
+|.++. ++...+..... .... .......+............|.|||+.+....
T Consensus 285 --------~P~~d~-----~~~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~------------ 337 (447)
T 2dv6_A 285 --------LPQVDR-----EFYVMQGEIYT-VKSF-GTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR------------ 337 (447)
T ss_dssp --------SCCCSE-----EEEEEEEEECB-SSCT-TCCEECCBBHHHHHTTCCSEEEETTSTTCCCC------------
T ss_pred --------CCCCCe-----eEEEEeccccc-CCcc-cccccccCChHHhhccCCCEEEECCcccCCCC------------
Confidence 111110 00000000000 0000 00000000000000011246788887652110
Q ss_pred ccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCC
Q 008038 415 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKF 493 (580)
Q Consensus 415 ~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~ 493 (580)
...+.++.|++++|+|+|.+. . .||||||||+|+||+.+++ +
T Consensus 338 ------------------------------~~~~~v~~g~~vrlrliN~~~~~------~h~~hlhGh~f~vv~~dG~-~ 380 (447)
T 2dv6_A 338 ------------------------------SHPLYASVGETVRIFFGVGGPNF------TSSFHVIGEIFDHVYSLGS-V 380 (447)
T ss_dssp ------------------------------CCCEEECTTCEEEEEEEEEESSC------CEEEEEETCCEEEECGGGC-S
T ss_pred ------------------------------CcceEECCCCEEEEEEEeCCCCc------eEeEEEcCcEEEEEEcCCc-c
Confidence 013888999999999999763 3 8999999999999997432 2
Q ss_pred CcccccccCCCCCC-ccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 494 TKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 494 ~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+..|. +|||+.|+||+++.|+|+++|||.|+||||+++|++.||+++|.+..
T Consensus 381 ---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 381 ---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp ---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred ---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 12334 69999999999999999999999999999999999999999997644
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-49 Score=403.01 Aligned_cols=268 Identities=22% Similarity=0.280 Sum_probs=222.0
Q ss_pred cCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.+. ..++++||||+. .+||.+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 4678899999999999887 899999999999999999999999999999999953 269999999984 368887
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCc---chhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHH
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~ 181 (580)
.. ..|.||++++|+|+++++||||||||. ..|+.+||+|+|||++++. .| .+|+|++++++||++.+.....
T Consensus 109 ~~--~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~~ 183 (327)
T 1kbv_A 109 AA--TFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGAQ 183 (327)
T ss_dssp TT--TCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCC
T ss_pred cc--eeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCccccc
Confidence 54 359999999999999999999999995 6899999999999998643 23 5789999999999987531100
Q ss_pred h--hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 182 V--GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 182 ~--~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
. ........ ...++.++|||+.++.|. .+.+++++||+|||||+|+|....+.|+
T Consensus 184 g~~~~~~~~~~-~~~~~~~~iNG~~~~~~~----------------------~~~l~v~~G~~vRlRliN~~~~~~~~~~ 240 (327)
T 1kbv_A 184 GLQPFDMDKAV-AEQPEYVVFNGHVGALTG----------------------DNALKAKAGETVRMYVGNGGPNLVSSFH 240 (327)
T ss_dssp EEECBCHHHHH-HTCCSEEEETTSTTTTSG----------------------GGCEEEETTEEEEEEEEEEESSCCEEEE
T ss_pred cccccChhHhc-cCCCceEEEcCcccCCCC----------------------ceeEEeCCCCEEEEEEECCCCCCceeEE
Confidence 0 00000000 135789999999987311 1369999999999999999988899999
Q ss_pred EeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 260 VKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 260 i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
|+||+|+||+.||.+++|..++++.|+||||+||+|++++ +|.|+|+|+..... ......|+++|.+.
T Consensus 241 l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~--pG~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 241 VIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred EeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC--CeEEEEEecccccc-ccCCcEEEEEECCC
Confidence 9999999999999999999999999999999999999997 79999999865432 12356899999854
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=384.16 Aligned_cols=238 Identities=21% Similarity=0.312 Sum_probs=208.4
Q ss_pred CCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCC
Q 008038 28 GSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASI 106 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~ 106 (580)
...+++|+|++++..+.. +|..+.+|+|||++|||+||+++||+|+|+|+|+ +..+++|||||++. .++||+|++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~-~~~~~~iH~HG~~~---~~~DG~p~~ 106 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNA-GAHPHTIHFHGVHR---ATMDGTPGI 106 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-SSSCBCCEESSCCC---GGGSCCTTS
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeC-CCCcccEEeccccc---cccCCCCCc
Confidence 446789999999988774 5999999999999999999999999999999999 78999999999973 689999999
Q ss_pred ccccCCCCCeEEEEEEcCCCcceeeecCcc---hhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhh
Q 008038 107 SQCPINPGETYLYRFKVDKAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG 183 (580)
Q Consensus 107 ~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~ 183 (580)
+|++|+||++++|+|+++++||||||||.. .|+.+||+|+|||+++... ..+|+|++|+++||+.++
T Consensus 107 ~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~---~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR---PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp TTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC---CCCSEEEEEEEEEECCSS-------
T ss_pred cceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC---CCCcceEEEEEeeEecCC-------
Confidence 999999999999999999999999999975 6899999999999987652 245799999999998762
Q ss_pred hcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEEEEeC
Q 008038 184 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKN 262 (580)
Q Consensus 184 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~~i~g 262 (580)
...++.++|||+.+++ ....+++++|++|||||+|++... .+.|||+|
T Consensus 177 --------g~~~~~~~iNG~~~~~-----------------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG 225 (288)
T 3gdc_A 177 --------GDDNEFYSVNGLPFHF-----------------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHG 225 (288)
T ss_dssp --------TTCCSEEEETTSTTHH-----------------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETT
T ss_pred --------CCCcceEEECcccccc-----------------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcC
Confidence 1146889999998751 012589999999999999998654 69999999
Q ss_pred eeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 263 HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 263 h~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
|.|+|++ +|..+ .|...|++.|.||||++|++++++ +|.|.++|+...
T Consensus 226 ~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~--pG~~~~hCH~~~ 274 (288)
T 3gdc_A 226 NFFHYYP-TGTMLTPSEYTDTISQVQGQRGILELRFPY--PGKFMFHAHKTE 274 (288)
T ss_dssp CCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEECCCS--CEEEEEECSSHH
T ss_pred CEEEEEc-CCCccCCCceeeEEEeCCCceEEEEEECCC--CEEEEEEecChH
Confidence 9999988 55555 578999999999999999999987 899999998644
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-48 Score=448.31 Aligned_cols=389 Identities=17% Similarity=0.210 Sum_probs=263.4
Q ss_pred ceeEEEEEcCCCCC--CeEEecCCCEEEEEEEeCCCCCceeeeeccccccC-CCCCCCCCCCccccCCCCCeEEEEEEcC
Q 008038 48 KESIVMGINGQFPG--PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLG-TPWADGTASISQCPINPGETYLYRFKVD 124 (580)
Q Consensus 48 ~~~~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~-~~~~DG~~~~~q~~i~pG~~~~y~f~~~ 124 (580)
..+.+.++||++|| |.|++++||+|.++|.|. .+.+||||+++.+ ++++||++.++ |+|.||.+++|.|++.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 56789999999999 889999999999999987 3459999999998 89999999998 9999999999999999
Q ss_pred CCcceeeecCcchhhccccEEEEEEEcCCCCCCC-CCCCcceEEEE----eecccCchHHHHhhhcCCCCCCCCCCceEE
Q 008038 125 KAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP-FHYDGEFNLLL----SDWWHRSVHEQEVGLSSRPLRWIGEPQTLL 199 (580)
Q Consensus 125 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~p-~~~d~e~~l~~----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (580)
++||||||||+..|+.+||.|.++|+++.....+ +.||.|.++.+ +||++.+.......+...... .+...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554444 67888999999 899998765433222111011 133344
Q ss_pred eCccCCCCcc-----ccccccCCCcc----cccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEE
Q 008038 200 INGRGQFNCS-----LAAHFSNGSAE----QCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA 270 (580)
Q Consensus 200 iNG~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~ 270 (580)
+|+....-.+ ..-.|++.... .+.....-+...++|++++|+++++||.|... ..+.++.+|. .+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl--~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGV--QTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSC--BCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccc--cccCC
Confidence 4543211000 00011111000 00000001233478999999999999999864 4566777663 33221
Q ss_pred CCcccCceeeeeEEEcCCceEEEEEEeCCCC--------CcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCC
Q 008038 271 DGNYVQPFEVDDMDIYSGESYSVLLTTNQDP--------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPI 342 (580)
Q Consensus 271 DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~--------~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~ 342 (580)
| ...+.||++++..+...+.. .|+||++++......-.....+.|.+.+.... ....
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l--~~~~--- 909 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL--KVFN--- 909 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-------C---
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccc--cccC---
Confidence 2 12468999988888876421 26899998743210001122344444321110 0000
Q ss_pred CCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeee----------------------------cCCeEEEEEc
Q 008038 343 TPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT----------------------------INGFTKWAIN 394 (580)
Q Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~----------------------------~~~~~~~~iN 394 (580)
++ .++++.+...... ......|.||
T Consensus 910 -------------------------~~--~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iN 962 (1065)
T 2j5w_A 910 -------------------------PR--RKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAIN 962 (1065)
T ss_dssp -------------------------CC--CEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEET
T ss_pred -------------------------CC--cceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEEEC
Confidence 00 0111111110000 0001134555
Q ss_pred ceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCC--CCCCCCCC
Q 008038 395 NVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNAN--AIRPNLSE 472 (580)
Q Consensus 395 g~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~--~~~~~~~~ 472 (580)
|..|. ....+.++.|++|+|+|.|.+ .+
T Consensus 963 G~~~~--------------------------------------------~~~~~~v~~G~~vr~~l~N~g~~~~------ 992 (1065)
T 2j5w_A 963 GRMFG--------------------------------------------NLQGLTMHVGDEVNWYLMGMGNEID------ 992 (1065)
T ss_dssp TBCTT--------------------------------------------CCCCCEEETTCEEEEEEEECCSTTC------
T ss_pred CccCC--------------------------------------------CCccEEeCCCCEEEEEEEeCCCCCc------
Confidence 54331 112378999999999999974 34
Q ss_pred CCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 473 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 473 ~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||||||||.|+|++++ |.+|||+.|+||++++|+|++||||.|+||||+++|++.|||++|.|
T Consensus 993 ~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V 1056 (1065)
T 2j5w_A 993 LHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1056 (1065)
T ss_dssp CEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred ceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEE
Confidence 89999999999999762 47899999999999999999999999999999999999999999988
Q ss_pred ccc
Q 008038 553 GVE 555 (580)
Q Consensus 553 ~~~ 555 (580)
...
T Consensus 1057 ~~~ 1059 (1065)
T 2j5w_A 1057 LQN 1059 (1065)
T ss_dssp ECC
T ss_pred ecC
Confidence 654
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=377.49 Aligned_cols=134 Identities=31% Similarity=0.506 Sum_probs=109.1
Q ss_pred cCCceEEEEEEEEEEEeCCCCceeE-EEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPDCKESI-VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+.+++++|+|++++. ++|.+.. ++.+||++|||+|+|++||+|+|+|+|. ++++++|||||+.+. +++||++
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~-l~~~~sih~HG~~~~--~~~DG~~- 116 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 116 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEEC-CCCCeeEEecCcccC--CcCCCcc-
Confidence 356789999999874 3554332 2235899999999999999999999999 689999999999986 6899999
Q ss_pred CccccCCCCCeEEEEEEcCC-------------CcceeeecCc------chhhccccEEEEEEEcCCCCCCCCCCCcceE
Q 008038 106 ISQCPINPGETYLYRFKVDK-------------AGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFN 166 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~-------------~Gt~wYH~H~------~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~ 166 (580)
++||+|.||++++|+|++.+ +|+||||||. ..|+..||+|+|||+++.+. .+|+|++
T Consensus 117 ~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~----~pd~e~~ 192 (343)
T 3cg8_A 117 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHT 192 (343)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEE
T ss_pred cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC----CCCceEE
Confidence 88999999999999999954 5899999995 36889999999999986541 2355665
Q ss_pred EEEee
Q 008038 167 LLLSD 171 (580)
Q Consensus 167 l~~~d 171 (580)
|+++|
T Consensus 193 l~~~d 197 (343)
T 3cg8_A 193 IVFND 197 (343)
T ss_dssp EEEET
T ss_pred EEccc
Confidence 55543
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=390.87 Aligned_cols=269 Identities=21% Similarity=0.266 Sum_probs=222.7
Q ss_pred cCCceEEEEEEEEEEEeC-CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS-PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ..+++|||||+.. +||.+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 577899999999999988 5899999999999999999999999999999999953 2699999999863 68877
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecC---cchhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHH
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H---~~~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~ 181 (580)
.+ .+|.||++++|+|+++++|||||||| ...|+.+||+|+|||++++. .| .+|+|++|+++||++.......
T Consensus 99 ~~--~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~ 173 (442)
T 2zoo_A 99 ES--SFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFGEA 173 (442)
T ss_dssp GG--CCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCC
T ss_pred cc--EEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCccccc
Confidence 64 36999999999999999999999997 56899999999999997643 22 6789999999999987532100
Q ss_pred -h-hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEE
Q 008038 182 -V-GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA 259 (580)
Q Consensus 182 -~-~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~ 259 (580)
. .+...... ...+++++|||+.++. ...+.+++++|++|||||+|+|....+.|+
T Consensus 174 ~~~~~~~~~~~-~~~~~~~liNG~~~~~----------------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~ 230 (442)
T 2zoo_A 174 GLQPFDMAKAI-DEDADYVVFNGSVGST----------------------TDENSLTAKVGETVRLYIGNGGPNLVSSFH 230 (442)
T ss_dssp EEECBCHHHHH-TTCCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEEEEEEESSCCEEEE
T ss_pred ccccCChhHhc-cCCCCEEEECCCcCCC----------------------CCCCceEeCCCCEEEEEEEeCCCCCceeeE
Confidence 0 00000000 2467999999998651 011369999999999999999988889999
Q ss_pred EeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCCC
Q 008038 260 VKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 331 (580)
Q Consensus 260 i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~ 331 (580)
|+||+|+||+.||.+++|..++++.|.||||+||+|++++ +|+|+++++..... ......++++|.+..
T Consensus 231 i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~--~G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 231 VIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV--PGTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp EETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS--CEEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred EcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC--CCeEEEEecccccc-cccCceEEEEecCCC
Confidence 9999999999999999999999999999999999999987 79999999865431 134568999998544
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=367.39 Aligned_cols=269 Identities=19% Similarity=0.219 Sum_probs=211.4
Q ss_pred ccCCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|+ .+++||||+++.+....||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~----~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP----PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----TTCCSCBCCEETTSCSGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----CCCcccccceecCCCCCCCCC
Confidence 45678999999999998886 6999999999999999999999999999999999 378999999986544456556
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCcc-----hhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccC
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHLG-----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR 175 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~-----~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~ 175 (580)
+++ .|+||++++|+|++.++||||||||.. .|+.+||+|+|||+++... ..|..||+|++|+++||++.
T Consensus 103 ~~~--~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GGC--CBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred cee--EeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 555 499999999999999999999999975 6999999999999976532 23567899999999999984
Q ss_pred ch--HHHHhhhcC---------CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEE
Q 008038 176 SV--HEQEVGLSS---------RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 244 (580)
Q Consensus 176 ~~--~~~~~~~~~---------~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~r 244 (580)
.. ..+ ..+.. ..+. ...++.++|||+.++ + ...+.+++++||+||
T Consensus 181 ~~~~g~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~ING~~~~-------~---------------~~~~~l~v~~Ger~R 236 (333)
T 1mzy_A 181 KDEDGTY-MRFSDPSEGYEDMVAVMD-TLIPSHIVFNGAVGA-------L---------------TGEGALKAKVGDNVL 236 (333)
T ss_dssp BCTTSCB-CCCSSHHHHHHHHHHHHT-TTCCSEEEETTSTTT-------T---------------SGGGCEEEETTCEEE
T ss_pred ccccccc-cccccccccccchhHHhh-ccCCcEEEECCcccc-------c---------------CCCcceEecCCCEEE
Confidence 21 110 00000 0000 235789999999865 1 012369999999998
Q ss_pred EEEeecCCceeEEEEEeCeeeEEEEECCcccCc-e-eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCce
Q 008038 245 LRIASTTALASLNLAVKNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPAL 322 (580)
Q Consensus 245 lRliNag~~~~~~~~i~gh~~~via~DG~~v~P-~-~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ 322 (580)
||++|++....+ ..+++|.++|++ ||.++++ . .++++.|.||||+||+|++++ +|+|+++|+..... ......
T Consensus 237 l~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~-~~~Gm~ 311 (333)
T 1mzy_A 237 FVHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEA-VHKGAT 311 (333)
T ss_dssp EEEEESSSCBCE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTCCE
T ss_pred EEECCCCCcccc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhH-hhCCCE
Confidence 887776543323 347899999999 9999964 4 489999999999999999997 79999999975431 124567
Q ss_pred EEEEecC
Q 008038 323 TLLNYHP 329 (580)
Q Consensus 323 ail~y~~ 329 (580)
++++|.+
T Consensus 312 ~~~~v~~ 318 (333)
T 1mzy_A 312 AHVLVEG 318 (333)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 8999984
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=367.56 Aligned_cols=270 Identities=23% Similarity=0.277 Sum_probs=206.2
Q ss_pred cCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|++ +++||||+++.+..++||.+
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC----CCCccccceECCCCCCCCCc
Confidence 466789999999998754 779999999999999999999999999999999994 23566666555445667766
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCc----chhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccCc
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHL----GMQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRS 176 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~~ 176 (580)
.+++ |.||++++|+|++.++||||||||. ..|+.+||+|+|||+++... ..|..||+|++|+++||++..
T Consensus 104 ~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred ceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 6654 9999999999999999999999996 47999999999999986542 235567999999999999852
Q ss_pred hHH-HHhhhcCCCCC--------CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEE
Q 008038 177 VHE-QEVGLSSRPLR--------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRI 247 (580)
Q Consensus 177 ~~~-~~~~~~~~~~~--------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRl 247 (580)
... .+..+...+.. ....++.++|||+.++.|. .+.+++++||+|||
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~----------------------~~~l~v~~GervRl-- 237 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTG----------------------ANALTAKVGETVLL-- 237 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSG----------------------GGCEEEETTCEEEE--
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCC----------------------CcceEcCCCCEEEE--
Confidence 110 00000000000 0236789999999876210 13699999997765
Q ss_pred eecCCceeEE-EEEeCeeeEEEEECCcccCce--eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEE
Q 008038 248 ASTTALASLN-LAVKNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324 (580)
Q Consensus 248 iNag~~~~~~-~~i~gh~~~via~DG~~v~P~--~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ai 324 (580)
+|++..+.+. +.|++|.|+|++ ||.+++|. .++++.|++|||+||+|++++ +|+|+++|+..... ......|+
T Consensus 238 in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~-~~~G~~~~ 313 (336)
T 1oe1_A 238 IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEA-FELGAAGH 313 (336)
T ss_dssp EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEE
T ss_pred EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC--CceEEEEechhhcc-ccCCCeEE
Confidence 5665554544 446999999997 99999764 368999999999999999997 79999999864321 12456789
Q ss_pred EEecCC
Q 008038 325 LNYHPT 330 (580)
Q Consensus 325 l~y~~~ 330 (580)
++|.+.
T Consensus 314 ~~V~~~ 319 (336)
T 1oe1_A 314 IKVEGK 319 (336)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 999853
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=355.75 Aligned_cols=239 Identities=21% Similarity=0.296 Sum_probs=198.5
Q ss_pred ccCCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
.+.+++|+|+|++++. ..+......+++||++|||+||+++||+|+|+|+|+ ++.++||||||+++. .++||++
T Consensus 2 ~~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~-~~~~~siH~HG~~~~--~~~DG~~- 75 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNT-MDVRASLHVHGLDYE--ISSDGTA- 75 (276)
T ss_dssp --CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT-
T ss_pred CCcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEEC-CCCCccEeecCcccC--CccCCCc-
Confidence 3578899999999874 334455567789999999999999999999999999 799999999999986 4799999
Q ss_pred CccccCCCCCeEEEEEEcCC-------------CcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcceE
Q 008038 106 ISQCPINPGETYLYRFKVDK-------------AGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEFN 166 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~-------------~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~ 166 (580)
++||+|+||++++|+|++.+ +||||||||.. .|+.+||+|+|||+++.+. ..|+|++
T Consensus 76 ~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~----~~drE~~ 151 (276)
T 3kw8_A 76 MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHT 151 (276)
T ss_dssp TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEE
T ss_pred CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc----ccccceE
Confidence 89999999999999999953 79999999963 6899999999999997652 2389999
Q ss_pred EEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEE
Q 008038 167 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 246 (580)
Q Consensus 167 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlR 246 (580)
|+++|| +|||+.+. ..+.++++.|++||||
T Consensus 152 l~l~~~--------------------------~iNG~~~~------------------------~~p~i~v~~G~~vri~ 181 (276)
T 3kw8_A 152 IVFNDM--------------------------TINNRKPH------------------------TGPDFEATVGDRVEIV 181 (276)
T ss_dssp EEEETT--------------------------EETTCCTT------------------------CCCCEEEETTCEEEEE
T ss_pred EEeccc--------------------------ccceeccc------------------------CCCCEEEecCCEEEEE
Confidence 988653 79999764 1246999999999999
Q ss_pred EeecCCceeEEEEEeCeeeEEEEECCcccC----ceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 247 IASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 247 liNag~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
|+|.+.. .+.|||+||.|.+++ ||.... +..+|++.|.|||++++++++++ +.+|.|+++|+..... ....
T Consensus 182 l~N~~~~-~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~--~~GM 257 (276)
T 3kw8_A 182 MITHGEY-YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS--DMGM 257 (276)
T ss_dssp EEEESSC-CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EecCCCc-ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHh--hCCC
Confidence 9999874 899999999999975 775432 46789999999999999999974 2379999999964321 2344
Q ss_pred eEEEEec
Q 008038 322 LTLLNYH 328 (580)
Q Consensus 322 ~ail~y~ 328 (580)
.+.+++.
T Consensus 258 ~g~~~V~ 264 (276)
T 3kw8_A 258 VGLFLVK 264 (276)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 6667666
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=366.41 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=207.2
Q ss_pred cCCceEEEEEEEEEEEeC--CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----CCCccCcceeCCcCCCCCCc
Confidence 467889999999998876 669999999999999999999999999999999994 67899999876544444444
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecCcc----hhhccccEEEEEEEcCCCC----CCCCCCCcceEEEEeecccC-
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGHLG----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR- 175 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~----~~p~~~d~e~~l~~~d~~~~- 175 (580)
.++ .|.||++++|+|++.++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++.
T Consensus 110 ~~~--~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 187 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPK 187 (340)
T ss_dssp GGC--CBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCB
T ss_pred cce--EeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeecc
Confidence 444 499999999999999999999999964 7999999999999986531 23567899999999999983
Q ss_pred -chHHHHhhhcCC------CCC--CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEE
Q 008038 176 -SVHEQEVGLSSR------PLR--WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 246 (580)
Q Consensus 176 -~~~~~~~~~~~~------~~~--~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlR 246 (580)
....+ ..+... ... ....++.++|||+.+.. ...+.+++++||++||+
T Consensus 188 ~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------------------~~~~~l~v~~G~r~Rl~ 244 (340)
T 2bw4_A 188 DEAGNY-KKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL----------------------TGDHALTAAVGERVLVV 244 (340)
T ss_dssp CTTSCB-CCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEE
T ss_pred ccCCcc-cccccccccccchhhHhhcCCCCEEEECCccCCc----------------------cCCCceEcCCCCEEEEE
Confidence 11110 000000 000 02357899999998751 01247999999988877
Q ss_pred EeecCCceeEEEEEeCeeeEEEEECCcccC-ce-eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEE
Q 008038 247 IASTTALASLNLAVKNHKMVVVEADGNYVQ-PF-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL 324 (580)
Q Consensus 247 liNag~~~~~~~~i~gh~~~via~DG~~v~-P~-~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ai 324 (580)
++|++.. ....++++|.|+|++ ||.++. |. .++++.|.||||+||+|++++ +|+|+++|+..... ......++
T Consensus 245 n~~~~~~-~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h-~~~Gm~~~ 319 (340)
T 2bw4_A 245 HSQANRD-TRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEA-FELGAAGH 319 (340)
T ss_dssp EEESSSC-BCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEE
T ss_pred ECCCCCc-cceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC--CeeeEEEcCchHHH-HhCCCEEE
Confidence 7665533 333458999999997 999885 43 589999999999999999997 79999999875211 12345788
Q ss_pred EEecCC
Q 008038 325 LNYHPT 330 (580)
Q Consensus 325 l~y~~~ 330 (580)
++|.+.
T Consensus 320 ~~V~~~ 325 (340)
T 2bw4_A 320 FKVTGE 325 (340)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 999853
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=357.76 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=194.8
Q ss_pred ccCCceEEEEEEEEEEEeCCCC-ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+.+.+++|+|.+++.. ++ ..+.++.+||++|||+||+++||+|+|+|+|+ +++++||||||+++. +++||++
T Consensus 24 ~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~-l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNT-TDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ---CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCCT
T ss_pred ccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEEC-CCCCccEEeCCcccC--CccCCCc
Confidence 46788999999988754 33 23345667999999999999999999999999 799999999999885 6899997
Q ss_pred CCccccCCCCCeEEEEEEcC-------------CCcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 105 SISQCPINPGETYLYRFKVD-------------KAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~-------------~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
++||+|+||++++|+|++. ++||||||||.. .|+.+||+|+|||+++.+ ..+|+|+
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~e~ 172 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKRQF 172 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc----cCccccc
Confidence 7899999999999999984 689999999953 367899999999998754 3468999
Q ss_pred EEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEE
Q 008038 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 245 (580)
Q Consensus 166 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rl 245 (580)
+|++.+| .+||+..+ ..+.++++.||+|||
T Consensus 173 ~l~~~~~--------------------------~~Ng~~~~------------------------~~p~l~v~~Ge~Vr~ 202 (299)
T 3t9w_A 173 TVVFNDM--------------------------MINNRAHH------------------------DAPTFEANLGERVEW 202 (299)
T ss_dssp EEEEETT--------------------------EETTCCTT------------------------CCCEEEEETTCEEEE
T ss_pred eeeeeee--------------------------eecCcccc------------------------ccccceecCCCEEEE
Confidence 9998765 36777655 123699999999999
Q ss_pred EEeecCCceeEEEEEeCeeeEEEEECCcccC---ceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 246 RIASTTALASLNLAVKNHKMVVVEADGNYVQ---PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 246 RliNag~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
||+|++.. .+.|||+||.|.|+..|+.... +..+|++.|.||||++++|...+ +.+|.|.++|+..... ....
T Consensus 203 ~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~--~~GM 279 (299)
T 3t9w_A 203 IAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHS--DMGM 279 (299)
T ss_dssp EEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHH--hcCC
Confidence 99999865 6999999999999998887663 34689999999999999987543 2479999999975432 2344
Q ss_pred eEEEEecC
Q 008038 322 LTLLNYHP 329 (580)
Q Consensus 322 ~ail~y~~ 329 (580)
.+++.+.+
T Consensus 280 ~~~f~V~~ 287 (299)
T 3t9w_A 280 AGMFLVRN 287 (299)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 66677663
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=356.84 Aligned_cols=239 Identities=19% Similarity=0.243 Sum_probs=197.1
Q ss_pred ccCCceEEEEEEEEEEEeCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 26 SYGSKTRHYKWEVEYMFWSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
.+...+++++|.+++ -++|.. ..++..||++|||+||+++||+|+|+|+|+ +++++||||||+++. +.+||++
T Consensus 8 p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENT-MDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEEC-SSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEEC-CCCCccEeecCCcCC--ccCCCCc
Confidence 456788999998753 345644 446778999999999999999999999999 799999999999985 5799998
Q ss_pred CCccccCCCCCeEEEEEEcC-------------CCcceeeecCcc------hhhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 105 SISQCPINPGETYLYRFKVD-------------KAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~-------------~~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
.+||+|+||++++|+|++. ++||||||||.. .|+.+||+|+|||+++.+ ..+|+|+
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~e~ 156 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDRTH 156 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSEEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccccc
Confidence 5899999999999999863 679999999954 347899999999998754 3569999
Q ss_pred EEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEE
Q 008038 166 NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 245 (580)
Q Consensus 166 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rl 245 (580)
+|+++|| ++||+..++ .+.+.++.||+|||
T Consensus 157 ~l~~~d~--------------------------t~Ng~~~~~------------------------~~~l~v~~Ge~vr~ 186 (313)
T 3tas_A 157 TIVFNDM--------------------------TINNRPAHT------------------------GPDFEATVGDRVEF 186 (313)
T ss_dssp EEEEETT--------------------------EETTCCTTC------------------------CCCEEEETTCEEEE
T ss_pred eeeccch--------------------------hcccCCccc------------------------ccccccccCCEEEE
Confidence 9999987 356665541 12589999999999
Q ss_pred EEeecCCceeEEEEEeCeeeEEEEECCccc---CceeeeeEEEcCCceEEEEEEeCC-CCCcceEEEEeecCCCCCCCCc
Q 008038 246 RIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPA 321 (580)
Q Consensus 246 RliNag~~~~~~~~i~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~-~~~g~y~l~~~~~~~~~~~~~~ 321 (580)
||+|++. ..+.|||+||.|+|++.||... .|..+|++.|.||||++++|.+.+ +.+|.|.++||..... ....
T Consensus 187 ~liN~g~-~~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~--~~GM 263 (313)
T 3tas_A 187 VMITHGE-YYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS--DMGM 263 (313)
T ss_dssp EEEEESS-CCEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--HTTC
T ss_pred EEecccc-cceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH--HCCC
Confidence 9999995 4799999999999999998766 477899999999999999998753 2379999999964432 2345
Q ss_pred eEEEEec
Q 008038 322 LTLLNYH 328 (580)
Q Consensus 322 ~ail~y~ 328 (580)
.+++.+.
T Consensus 264 ~~~f~V~ 270 (313)
T 3tas_A 264 VGLFLVK 270 (313)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 6777776
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=346.07 Aligned_cols=215 Identities=15% Similarity=0.242 Sum_probs=160.9
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC------Cc--cccCCCCCeEEEEE
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS------IS--QCPINPGETYLYRF 121 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~------~~--q~~i~pG~~~~y~f 121 (580)
+..+++| ++|||+|+|++||+|+|+|+|. +.++++|||||++.. +.+||++. ++ ||+|+||++++|+|
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~-l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f 124 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNK-AHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEW 124 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEEC-SSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEEC-CCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEE
Confidence 3456789 5899999999999999999999 789999999999953 34555554 33 79999999999999
Q ss_pred EcCC----------CcceeeecCcch--hhccccEEEEEEEcCCC---CCCCCCCCcceEEEEeecccCchHHHHhhhcC
Q 008038 122 KVDK----------AGTYFYHGHLGM--QRSAGLYGSLIVDVADG---EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 186 (580)
Q Consensus 122 ~~~~----------~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~---~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~ 186 (580)
++.+ +||||||||... |+.+||+|+|||+++.+ ...+..+|+|++|+++||..... .
T Consensus 125 ~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~------~-- 196 (306)
T 1sdd_A 125 IISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS------W-- 196 (306)
T ss_dssp ECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS------S--
T ss_pred EeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc------c--
Confidence 9943 379999999765 78999999999998753 22344568999999999742110 0
Q ss_pred CCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeee
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKM 265 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~ 265 (580)
+...++.++|||+.+.+ .+.+++++||+|||||+|++.. ..+.|+|+||.|
T Consensus 197 ----~~~~~~~~~ING~~~~~------------------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~ 248 (306)
T 1sdd_A 197 ----NQTSSLMYTVNGYVNGT------------------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVL 248 (306)
T ss_dssp ----SCCCCEEECSSSCCSSC------------------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTC
T ss_pred ----ccCCCcceeeCCEecCC------------------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEe
Confidence 01246789999998641 1358899999999999999976 568899999999
Q ss_pred EEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 266 VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 266 ~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
.+ ||. .+|++.|.||||+||+|++++ +|.|+++|+....
T Consensus 249 ~~---dG~-----~~dtv~l~pger~~v~~~~~~--pG~~~~hch~~~H 287 (306)
T 1sdd_A 249 EQ---NHH-----KISAITLVSATSTTANMTVSP--EGRWTIASLIPRH 287 (306)
T ss_dssp EE---TTE-----ECSCCCEETTCCBC----------CCCCCBCCSTTT
T ss_pred ee---CCE-----EcceEEECCCcEEEEEEEcCC--CeEEEEEeCChHH
Confidence 76 884 589999999999999999987 7999999996543
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=340.42 Aligned_cols=266 Identities=22% Similarity=0.286 Sum_probs=212.2
Q ss_pred CCceEEEEEEEEEEEeCC-CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCCC
Q 008038 28 GSKTRHYKWEVEYMFWSP-DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
.+.+++|+|++....... +|....+|+|||++|||+|++++||+++|+|+|.+. ...++|||||+. .+||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCc
Confidence 345678888877666554 688899999999999999999999999999999953 368999999984 3699886
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCcc---hhhccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHh
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEV 182 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~---~~~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~ 182 (580)
.+ .|.||++++|.|++.++||||||||.. .|...||+|+|+|+++.. .| .+|+|++++++||++........
T Consensus 235 ~~--~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 235 FT--QTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp GC--CBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCE
T ss_pred cE--EeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccc
Confidence 54 499999999999999999999999963 688899999999998643 23 57889999999998753211000
Q ss_pred --hhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 183 --GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 183 --~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
.+..... ....++.++|||+.++++. ...+++++|++|||||+|++....+.|||
T Consensus 310 ~~~~~~~~~-~~~~~~~~~iNG~~~~~~~----------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hl 366 (447)
T 2dv6_A 310 EQEMDYEKL-INEKPEYFLFNGSVGSLTR----------------------SHPLYASVGETVRIFFGVGGPNFTSSFHV 366 (447)
T ss_dssp ECCBBHHHH-HTTCCSEEEETTSTTCCCC----------------------CCCEEECTTCEEEEEEEEEESSCCEEEEE
T ss_pred cccCChHHh-hccCCCEEEECCcccCCCC----------------------CcceEECCCCEEEEEEEeCCCCceEeEEE
Confidence 0000000 0225688999999887211 12689999999999999999878899999
Q ss_pred eCeeeEEEEECCcccCce--eeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 261 KNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 261 ~gh~~~via~DG~~v~P~--~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
+||.|+||+.||.+++|. .+|++.|.||||++|+|++++ +|.|+|+|+..... .....++++|.+.
T Consensus 367 hGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~--pG~~~~hch~~~h~--~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 367 IGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR--AGRYILVDHALSRL--EHGLVGFLNVDGP 434 (447)
T ss_dssp ETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCS--CEEEEEEESSGGGG--GGTCCEEEEECSC
T ss_pred cCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCC--CEEEEEEecCcCcc--ccCCEEEEEEeCC
Confidence 999999999999998654 589999999999999999987 79999999976542 2345789999743
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=360.65 Aligned_cols=262 Identities=16% Similarity=0.185 Sum_probs=189.2
Q ss_pred CCceEEEEEEEEEEEeC--CCC------------ceeEE--EEE----------------cCCCCCCeEEecCCCEEEEE
Q 008038 28 GSKTRHYKWEVEYMFWS--PDC------------KESIV--MGI----------------NGQFPGPTIRARAGDTIAVE 75 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~--~~g------------~~~~~--~~~----------------NG~~pgP~l~v~~Gd~v~v~ 75 (580)
.+++|+|=+.+++..+. |.| +.+++ ..| ++++|||+|||++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 46788898888887654 322 12222 223 44799999999999999999
Q ss_pred EEeCCCCCceeeeeccccccCCCCCCCCCCCc--------cccCCCCCeEEEEEEcCC------Cc----ceeeecCc--
Q 008038 76 LTNKLYTEGVVIHWHGIRQLGTPWADGTASIS--------QCPINPGETYLYRFKVDK------AG----TYFYHGHL-- 135 (580)
Q Consensus 76 v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~--------q~~i~pG~~~~y~f~~~~------~G----t~wYH~H~-- 135 (580)
|+|. +.++++|||||+++. +++||+|+++ ||+|+||++++|+|++.+ +| |||||||.
T Consensus 83 ~~N~-l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 83 FKNL-ASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp ECCC-SSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEC-CCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 9999 789999999999985 6899999876 999999999999999944 58 99999997
Q ss_pred chhhccccEEEEEEEcCCCCCC--CCC-CCcceEEEEe------ecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCC
Q 008038 136 GMQRSAGLYGSLIVDVADGEKE--PFH-YDGEFNLLLS------DWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQF 206 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~~~~~~~--p~~-~d~e~~l~~~------d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~ 206 (580)
..|+.+||+|+|||+++..... ... .++|++|+++ ||+++...... +......+...++.++|||+.++
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~iNG~~~~ 237 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRS--WRRASSEVKNSHEFHAINGMIYN 237 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSC
T ss_pred cccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccc--cccCCcchhhcCceeccCCEecC
Confidence 4689999999999999765211 112 3689999999 78876543211 11111112345789999999863
Q ss_pred CccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCce-eEEEEEeCeeeEEEEECCcccCceeeeeEEE
Q 008038 207 NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDI 285 (580)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~v~P~~~d~v~l 285 (580)
.+.+++++|++|||||+|++... .+.|||+||.|+|++.|| ..++++.|
T Consensus 238 -------------------------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l 287 (647)
T 1sdd_B 238 -------------------------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPL 287 (647)
T ss_dssp -------------------------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEE
T ss_pred -------------------------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEE
Confidence 12689999999999999999764 799999999999998886 47899999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCCceEEEEec
Q 008038 286 YSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH 328 (580)
Q Consensus 286 ~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~~~ail~y~ 328 (580)
.||||+||+|++++ +|.|.|+|+..... .....+++.+.
T Consensus 288 ~pg~r~~v~~~~~~--pG~w~~hch~~~h~--~~Gm~~~~~V~ 326 (647)
T 1sdd_B 288 LPGSFKTLEMKASK--PGWWLLDTEVGEIQ--RAGMQTPFLIV 326 (647)
T ss_dssp CTTEEEEEEEECCS--SEEEEEECCCHHHH--TTTCEEEEEEE
T ss_pred CCCeEEEEEEEecc--ceEeecccCccccc--ccccccceeee
Confidence 99999999999987 79999999964332 23345555554
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=365.99 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=196.4
Q ss_pred cCCceEEEEEEEEEEEe--CCCCc----------------eeEEE------EEcC-----------CCCCCeEEecCCCE
Q 008038 27 YGSKTRHYKWEVEYMFW--SPDCK----------------ESIVM------GING-----------QFPGPTIRARAGDT 71 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~--~~~g~----------------~~~~~------~~NG-----------~~pgP~l~v~~Gd~ 71 (580)
....+|+|.|.+++..+ +|++. .+.++ +|++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 36789999999999874 57653 22222 2333 68999999999999
Q ss_pred EEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcC----------CCcceeeecCcch--hh
Q 008038 72 IAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVD----------KAGTYFYHGHLGM--QR 139 (580)
Q Consensus 72 v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~----------~~Gt~wYH~H~~~--~~ 139 (580)
|+|+|+|. ++.+++|||||+++..+.+ ||+++ +||+|+||++|+|+|++. ++||||||||+.. |+
T Consensus 209 v~v~~~N~-l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~ 285 (770)
T 2r7e_B 209 IMVTFRNQ-ASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDV 285 (770)
T ss_dssp EEEEEECC-SSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHH
T ss_pred EEEEEEEC-CCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHH
Confidence 99999999 7899999999999986543 69998 899999999999999995 8999999999765 78
Q ss_pred ccccEEEEEEEcCCCCCC---CCCCCcceEEEEee------cccCchHHHHh----hhcCCCCCCCCCCceEEeCccCCC
Q 008038 140 SAGLYGSLIVDVADGEKE---PFHYDGEFNLLLSD------WWHRSVHEQEV----GLSSRPLRWIGEPQTLLINGRGQF 206 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~~~~---p~~~d~e~~l~~~d------~~~~~~~~~~~----~~~~~~~~~~~~~~~~liNG~~~~ 206 (580)
.+||+|+|||+++..... +..+|+|++|++++ |+++....... .+......+....+.++|||+.+.
T Consensus 286 ~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~ 365 (770)
T 2r7e_B 286 HSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIMD 365 (770)
T ss_dssp HTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTT
T ss_pred hCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccCCccCC
Confidence 999999999999764211 12357899988753 55543211000 000000111223567899999753
Q ss_pred CccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEE
Q 008038 207 NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDI 285 (580)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l 285 (580)
..+.+++++|++|||||+|++.. ..|.|||+||.|+|++.||. .+|++.|
T Consensus 366 ------------------------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l 416 (770)
T 2r7e_B 366 ------------------------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNL 416 (770)
T ss_dssp ------------------------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEEC
T ss_pred ------------------------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEE
Confidence 11358899999999999999865 47999999999999999974 8899999
Q ss_pred cCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 286 YSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 286 ~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
.||||++|+|++++ +|.|.|+||..
T Consensus 417 ~Pg~~~~v~~~ad~--pG~w~~hcH~~ 441 (770)
T 2r7e_B 417 YPGVFETVEMLPSK--AGIWRVECLIG 441 (770)
T ss_dssp CTTCCCEEEECCSS--CBCCCBCCCSH
T ss_pred CCCeEEEEEEEeCC--CCceEEEeccc
Confidence 99999999999987 89999999864
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=338.40 Aligned_cols=217 Identities=20% Similarity=0.278 Sum_probs=170.7
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCC-----CCCCCccccCCCCCeEEEEEEc-CCCc----
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWAD-----GTASISQCPINPGETYLYRFKV-DKAG---- 127 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~D-----G~~~~~q~~i~pG~~~~y~f~~-~~~G---- 127 (580)
.+|||+||+++||+|+|+|+|+ ++.++||||||+++. ++++| |+++++||+|+||++|+|+|++ +++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~-l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQ-ASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECC-SSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred CCCCCeEEEECCCEEEEEEEeC-CCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 5899999999999999999999 789999999999985 46766 4567789999999999999999 4444
Q ss_pred -----ceeeecCcch--hhccccEEEEEEEcCCCC---CCCCCCCcceEEEEee------cccCchHHHHhhhcCCCCC-
Q 008038 128 -----TYFYHGHLGM--QRSAGLYGSLIVDVADGE---KEPFHYDGEFNLLLSD------WWHRSVHEQEVGLSSRPLR- 190 (580)
Q Consensus 128 -----t~wYH~H~~~--~~~~Gl~G~liV~~~~~~---~~p~~~d~e~~l~~~d------~~~~~~~~~~~~~~~~~~~- 190 (580)
|||||||... |+.+||+|+|||+++.+. ..+..+|+|++|++++ |++...... +...+..
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~---~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQR---FLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHH---HSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhh---cccCchhc
Confidence 9999999654 678999999999987531 1234568999999964 544322111 1100100
Q ss_pred ------CCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCc-eeEEEEEeCe
Q 008038 191 ------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNH 263 (580)
Q Consensus 191 ------~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh 263 (580)
+......++|||+.+.+ . .+.+++||+|||||+|+|.. ..|.|||+||
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~~------------------------~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh 657 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFDS------------------------L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGY 657 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSSC------------------------C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSS
T ss_pred ccccccccccCceeeecCcCCCC------------------------C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCc
Confidence 00112357899997541 1 27899999999999998764 4689999999
Q ss_pred eeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 264 KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 264 ~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
.|+|+ |..+|+|.|.||||++|+|++++ +|.|.++||....
T Consensus 658 ~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~~~H 698 (742)
T 2r7e_A 658 TFKHK--------MVYEDTLTLFPFSGETVFMSMEN--PGLWILGCHNSDF 698 (742)
T ss_dssp CCCCB--------SSSBCSSCCCCCSSEECCEECCC--CCCSCCEECCCST
T ss_pred EEEEe--------ccceeEEEECCCcEEEEEEEcCC--CeEEEEEeCCchH
Confidence 99986 56889999999999999999987 7999999997654
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-30 Score=257.38 Aligned_cols=218 Identities=14% Similarity=0.166 Sum_probs=158.0
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
|+|++++|+++++|+.|.... .+.+|++|.. ..+.||.+. ++...|.|||++++.+++++ +|+||+|++..
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 489999999999999998754 7899999975 457899853 24467999999999999965 89999999874
Q ss_pred CCCC-CCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeec-C--Ce
Q 008038 313 GRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-N--GF 388 (580)
Q Consensus 313 ~~~~-~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~-~--~~ 388 (580)
.... ......+.|.+.+.... + ..++++.+....... + ..
T Consensus 137 ~~~~~~~~Gl~G~liV~~~~~~----------~--------------------------~~d~e~~l~~~d~~~~~g~~~ 180 (288)
T 3gdc_A 137 PLAPHIAKGLYGGFIVEPKEGR----------P--------------------------PADDEMVMVMNGYNTDGGDDN 180 (288)
T ss_dssp SHHHHHHTTCEEEEEEECSSCC----------C--------------------------CCSEEEEEEEEEECCSSTTCC
T ss_pred chHHHHhCcCeEEEEEeCCccC----------C--------------------------CCcceEEEEEeeEecCCCCCc
Confidence 3100 11233444444421100 0 013444443332111 1 13
Q ss_pred EEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCC
Q 008038 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 468 (580)
Q Consensus 389 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~ 468 (580)
..|.|||+.|.. ..+ .+.++.|++|+|+|.|.+..
T Consensus 181 ~~~~iNG~~~~~-------------------~~~------------------------~l~v~~Ge~vr~~l~N~g~~-- 215 (288)
T 3gdc_A 181 EFYSVNGLPFHF-------------------MDF------------------------PVKVKQHELVRIHLINVLEY-- 215 (288)
T ss_dssp SEEEETTSTTHH-------------------HHS------------------------CEEEETTCCEEEEEEECCCS--
T ss_pred ceEEECcccccc-------------------cCc------------------------ccccCCCCEEEEEEEeCCCC--
Confidence 468889876521 001 17889999999999998743
Q ss_pred CCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEE
Q 008038 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548 (580)
Q Consensus 469 ~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~ 548 (580)
...|||||||+.|+|++.+.. +..+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||+
T Consensus 216 --~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~ 282 (288)
T 3gdc_A 216 --DPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMG 282 (288)
T ss_dssp --SSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEE
T ss_pred --CcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCE
Confidence 115999999999999874321 1235899999999999999999999999999999999999999999
Q ss_pred EEecc
Q 008038 549 VLALG 553 (580)
Q Consensus 549 ~~~~~ 553 (580)
.|.|.
T Consensus 283 ~~~V~ 287 (288)
T 3gdc_A 283 FFEVS 287 (288)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-29 Score=254.95 Aligned_cols=219 Identities=21% Similarity=0.309 Sum_probs=149.8
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEE---ECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE---ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via---~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
|+|++++|+++|+||+|.... .+ +|+.|.+.+.+ .||.+. ++...|.||||+++.+++++ +|+||+|+
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 389999999999999999854 34 45555566665 499852 34467999999999999975 89999999
Q ss_pred eecCCCCCC-CCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-----
Q 008038 310 GVRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----- 383 (580)
Q Consensus 310 ~~~~~~~~~-~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~----- 383 (580)
+........ ....+.+.+.+.... . ++. ..++++.+.....
T Consensus 106 H~~~~~q~~~~Gl~G~liV~p~~~~-----~---~~~-------------------------~~d~e~~l~l~d~~~~~~ 152 (339)
T 2zwn_A 106 HVNVNEHVGVRGMWGPLIVDPKQPL-----P---IEK-------------------------RVTKDVIMMMSTWESAVA 152 (339)
T ss_dssp CSSHHHHTTTSCCEEEEEEECSSCC-----T---TGG-------------------------GCSEEEEEEEEEECGGGT
T ss_pred cCCchhhhhcCCceEeEEecCCCcc-----c---ccc-------------------------cCCceEEEEeeheecccc
Confidence 863211011 222333433321110 0 000 0011111111100
Q ss_pred --------ecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 384 --------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 384 --------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
.......|.|||+.+.. ...+.++.|++
T Consensus 153 ~~~~~~g~~~~~~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~ 188 (339)
T 2zwn_A 153 DKYGEGGTPMNVADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDV 188 (339)
T ss_dssp TCTTCCCSTTSCCCEEEETTBCTTS--------------------------------------------SCCEEECTTCE
T ss_pred cccCCCCCCccccceEEEccccCCC--------------------------------------------cccEEECCCCE
Confidence 00012356677754310 11278899999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEe
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 535 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~H 535 (580)
++|+|+|.+.. .||||||||+|+|++..+.. +.+|.++||+.|+||+++.|+|++++||.|++|
T Consensus 189 vrlrliN~~~~------~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~h 252 (339)
T 2zwn_A 189 VKIRFFGAGGG------IHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFH 252 (339)
T ss_dssp EEEEEEECSSS------CEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEE
T ss_pred EEEEEEeCCCc------eEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEE
Confidence 99999998866 89999999999999984321 123678999999999999999999999999999
Q ss_pred eecchh------hhcccEEEEecc
Q 008038 536 CHIEPH------FHIGMGVVLALG 553 (580)
Q Consensus 536 CHil~H------~d~GM~~~~~~~ 553 (580)
||+++| ++.||++++.+.
T Consensus 253 ch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 253 DHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp ECCGGGSCBTTBSSCSSEEEEEET
T ss_pred EechhhcccccccCCCcEEEEEEC
Confidence 999999 889999999653
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=253.81 Aligned_cols=220 Identities=17% Similarity=0.228 Sum_probs=154.1
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEE-EEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
|+|++++|+++++|+.|... ..+.+|++|....- .+.||.+. +....|.|||++++.+++++ +|+||+|++.
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 48999999999999999874 46889999876542 36799853 23457999999999999976 8999999986
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeee-------
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN------- 383 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~------- 383 (580)
...... .....+.|.+.+.... + .+. ..++++.+.....
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~~-------~-~~~-------------------------~~d~e~~l~l~dw~~~~~~~ 153 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNPL-------P-IEK-------------------------TVTKDYILMLSDWVSSWANK 153 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSCC-------H-HHH-------------------------TCCEEEEEEEEEECGGGTTC
T ss_pred ChhhhhccCCCEEEEEEcCCCcc-------c-ccc-------------------------cccceeEEEEEeeccccccc
Confidence 321100 1223344444422110 0 000 0011111111100
Q ss_pred ------ecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEE
Q 008038 384 ------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 457 (580)
Q Consensus 384 ------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 457 (580)
.......|.|||+.|.. . ..+.++.|++++
T Consensus 154 ~~~~~~~~~~~d~~~ING~~~~~--------------------~------------------------~~l~v~~G~~vr 189 (318)
T 3g5w_A 154 PGEGGIPGDVFDYYTINAKSFPE--------------------T------------------------QPIRVKKGDVIR 189 (318)
T ss_dssp TTCCCCTTCCCCEEEETTBCBTS--------------------S------------------------CCEEECTTCEEE
T ss_pred cccCCCCCCcCcEEEEcCcCCCC--------------------C------------------------ccEEeCCCCEEE
Confidence 00012357888875410 0 127889999999
Q ss_pred EEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeee
Q 008038 458 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 537 (580)
Q Consensus 458 ~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCH 537 (580)
|+|.|.+.. .||||||||.|+|+++.... +.+|.++||+.|+||+++.|+|+++|||.|+||||
T Consensus 190 lrliN~~~~------~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH 253 (318)
T 3g5w_A 190 LRLIGAGDH------VHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDH 253 (318)
T ss_dssp EEEEECSSS------CEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEES
T ss_pred EEEEeCCCc------eEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEec
Confidence 999998866 89999999999999984321 12467899999999999999999999999999999
Q ss_pred cchhhh------cccEEEEec
Q 008038 538 IEPHFH------IGMGVVLAL 552 (580)
Q Consensus 538 il~H~d------~GM~~~~~~ 552 (580)
+++|++ .|||+++.+
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~~ 274 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIEY 274 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEEE
T ss_pred cHHHhhccCcCCCCCEEEEEE
Confidence 999998 689999965
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-28 Score=245.41 Aligned_cols=217 Identities=18% Similarity=0.277 Sum_probs=154.9
Q ss_pred CCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCC----------
Q 008038 230 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ---------- 299 (580)
Q Consensus 230 ~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~---------- 299 (580)
.+.|+|++++|++++++|.|.... ..++|.+|..+.. +.||.++. .-.|.|||+++..++++.
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~-~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~ 127 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYDV-NSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWA 127 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred ccCceEEEECCeEEEEEEEECCCC-CccEEeCCcccCC-ccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCC
Confidence 345689999999999999998654 6889999876553 67897542 124799999999998863
Q ss_pred -CCCcceEEEEeecCCCC---C-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcce
Q 008038 300 -DPSYNYWISAGVRGRKP---A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 374 (580)
Q Consensus 300 -~~~g~y~l~~~~~~~~~---~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r 374 (580)
.+.|+||++++...... + ....++.|.+.+... ...++
T Consensus 128 ~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~-------------------------------------~~~d~ 170 (299)
T 3t9w_A 128 EGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD-------------------------------------LLPKR 170 (299)
T ss_dssp CCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------------------------------CCCSE
T ss_pred CCCceeEEEecCCcccccchhhhcccccceEEEecccc-------------------------------------cCccc
Confidence 14699999998644321 1 112234444331100 01246
Q ss_pred EEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCc
Q 008038 375 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 454 (580)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 454 (580)
++.+.+. .|.+|++.+. +.+ .+.++.|+
T Consensus 171 e~~l~~~--------~~~~Ng~~~~--------------------~~p------------------------~l~v~~Ge 198 (299)
T 3t9w_A 171 QFTVVFN--------DMMINNRAHH--------------------DAP------------------------TFEANLGE 198 (299)
T ss_dssp EEEEEEE--------TTEETTCCTT--------------------CCC------------------------EEEEETTC
T ss_pred cceeeee--------eeeecCcccc--------------------ccc------------------------cceecCCC
Confidence 6655442 3678876441 111 27889999
Q ss_pred EEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEE---EEEEecCcee
Q 008038 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTA---LRFVADNPGA 531 (580)
Q Consensus 455 ~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~---irf~adnpG~ 531 (580)
+|+|+|.|.+.. .||||||||.|+|+..+.... ....+.++||+.|.||+... ++|+++|||.
T Consensus 199 ~Vr~~liN~~~~------~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 199 RVEWIAIGHGSN------FHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp EEEEEEEEESSC------CCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEecccc------ceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 999999998876 899999999999987644322 22345689999999997664 4556689999
Q ss_pred eEEeeecchhhhcccEEEEeccccc
Q 008038 532 WAFHCHIEPHFHIGMGVVLALGVET 556 (580)
Q Consensus 532 w~~HCHil~H~d~GM~~~~~~~~~~ 556 (580)
|+|||||++|++.|||++|.|...+
T Consensus 265 w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 265 WMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEcCCHHHHhcCCeEEEEEECCC
Confidence 9999999999999999999886543
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-28 Score=241.03 Aligned_cols=215 Identities=17% Similarity=0.285 Sum_probs=158.3
Q ss_pred CceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCC----------
Q 008038 231 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 300 (580)
Q Consensus 231 ~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~---------- 300 (580)
..|+|+++.|+++++++.|.. ...+++|.+|..+.. +.||.+ +..-.|.||++++..+++++.
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 446899999999999999986 457899999987654 579986 233568999999999999752
Q ss_pred -CCcceEEEEeecCCC---CC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceE
Q 008038 301 -PSYNYWISAGVRGRK---PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 375 (580)
Q Consensus 301 -~~g~y~l~~~~~~~~---~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~ 375 (580)
..|+||+|++..... .+ ....++.|.+.+... . ..+++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------------------------------~----~~drE 149 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------------------------------V----LPDAT 149 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------------------------C----CCSEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------------------------------c----ccccc
Confidence 257899999864321 11 112234444432110 0 01456
Q ss_pred EEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 376 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 376 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
+.+.+. .|.|||+.+. ..+ .+.++.|++
T Consensus 150 ~~l~l~--------~~~iNG~~~~--------------------~~p------------------------~i~v~~G~~ 177 (276)
T 3kw8_A 150 HTIVFN--------DMTINNRKPH--------------------TGP------------------------DFEATVGDR 177 (276)
T ss_dssp EEEEEE--------TTEETTCCTT--------------------CCC------------------------CEEEETTCE
T ss_pred eEEEec--------ccccceeccc--------------------CCC------------------------CEEEecCCE
Confidence 555432 3789998652 111 288999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec---Cceee
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPGAW 532 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad---npG~w 532 (580)
|+|+|+|.+.+ .|||||||+.|++++. |.++. ....+.++||+.|+||+++.++|+++ |||.|
T Consensus 178 vri~l~N~~~~------~Hp~HlHG~~f~v~~~--G~~~~------p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 178 VEIVMITHGEY------YHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEecCCCc------ceeEEEccceeEEecc--CccCC------CcccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 99999998766 8999999999999753 33321 01124689999999999999999997 89999
Q ss_pred EEeeecchhhhcccEEEEecccc
Q 008038 533 AFHCHIEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 533 ~~HCHil~H~d~GM~~~~~~~~~ 555 (580)
+||||+++|++.|||++|.|.+.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECT
T ss_pred EEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999987653
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-27 Score=237.18 Aligned_cols=214 Identities=17% Similarity=0.272 Sum_probs=154.1
Q ss_pred CceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCC-----------
Q 008038 231 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ----------- 299 (580)
Q Consensus 231 ~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~----------- 299 (580)
+.|+|+++.|++++++|.|... ...++|.+|..+.. +.||.+. ..-.|.||++++..+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 4568999999999999999864 46889999876543 5688753 1224899999999988752
Q ss_pred CCCcceEEEEeecCCCCC----CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceE
Q 008038 300 DPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 375 (580)
Q Consensus 300 ~~~g~y~l~~~~~~~~~~----~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~ 375 (580)
.+.|+||+|++....... ....++.|.+.+... ...|++
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------------------------------~~~d~e 155 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------------------------------VLPDRT 155 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------------------------------------BCCSEE
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEeecccc-------------------------------------cccccc
Confidence 135899999986443210 112234444431100 012466
Q ss_pred EEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcE
Q 008038 376 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 455 (580)
Q Consensus 376 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 455 (580)
+.+.+. .|++|+..+. ..++ +.++.|++
T Consensus 156 ~~l~~~--------d~t~Ng~~~~--------------------~~~~------------------------l~v~~Ge~ 183 (313)
T 3tas_A 156 HTIVFN--------DMTINNRPAH--------------------TGPD------------------------FEATVGDR 183 (313)
T ss_dssp EEEEEE--------TTEETTCCTT--------------------CCCC------------------------EEEETTCE
T ss_pred ceeecc--------chhcccCCcc--------------------cccc------------------------cccccCCE
Confidence 655543 2678876431 1111 78899999
Q ss_pred EEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe---cCceee
Q 008038 456 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---DNPGAW 532 (580)
Q Consensus 456 v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a---dnpG~w 532 (580)
|+|+|.|.+.+ .||||||||.|+|+..+... .....+.++||+.|.|++.+.++|.+ +|||.|
T Consensus 184 vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w 249 (313)
T 3tas_A 184 VEFVMITHGEY------YHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAW 249 (313)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEeccccc------ceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeE
Confidence 99999998877 89999999999998764321 11234689999999999998877765 689999
Q ss_pred EEeeecchhhhcccEEEEeccc
Q 008038 533 AFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 533 ~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+|||||++|++.|||++|.|..
T Consensus 250 ~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 250 MYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEECSHHHHHTTCEEEEEEEC
T ss_pred EEEeCChHHHHCCCeEEEEEEC
Confidence 9999999999999999997754
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-25 Score=228.33 Aligned_cols=227 Identities=12% Similarity=0.121 Sum_probs=130.9
Q ss_pred eEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC----ceeeeeEEEcCCceEEEEEEeCCCC-------
Q 008038 233 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDP------- 301 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~v~l~pGeR~dv~v~~~~~~------- 301 (580)
|+|++++|+++++||.|... ..+++|.||..+.. +.||.+.. +...+...|.||||+++.+++++..
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 38999999999999999764 56788888877433 57888652 2233357799999999999997632
Q ss_pred -CcceEEEEeecCCC--CCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEE
Q 008038 302 -SYNYWISAGVRGRK--PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 378 (580)
Q Consensus 302 -~g~y~l~~~~~~~~--~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~ 378 (580)
.|+||+|++..... ...+.+ ++|.......... +..+.. + .++...+..... .. .
T Consensus 138 ~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~~~-----~~~~~~-d----~e~~l~~~d~d~-~~-~--------- 195 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLTED-----GTQKMF-E----KQHVLMFAVFDE-SK-S--------- 195 (306)
T ss_dssp SEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBCTT-----SSBSSS-C----CCCCCBCCEEET-TS-S---------
T ss_pred CceEEEEeccCCchhhhccCceE-EEEEccCCCCCcc-----CCcCcc-c----ceEEEEEEeccc-cc-c---------
Confidence 27999999853211 112222 3444332111100 000000 0 000000000000 00 0
Q ss_pred EeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEE
Q 008038 379 LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDV 458 (580)
Q Consensus 379 ~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~ 458 (580)
........|.|||+.+.. .| .+.++.|++++|
T Consensus 196 ----~~~~~~~~~~ING~~~~~--------------------~p------------------------~l~v~~G~~vrl 227 (306)
T 1sdd_A 196 ----WNQTSSLMYTVNGYVNGT--------------------MP------------------------DITVCAHDHISW 227 (306)
T ss_dssp ----SSCCCCEEECSSSCCSSC--------------------CC------------------------CCCCCCC-----
T ss_pred ----cccCCCcceeeCCEecCC--------------------Cc------------------------ceEEcCCCEEEE
Confidence 000012346777764310 00 166889999999
Q ss_pred EEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeec
Q 008038 459 ILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHI 538 (580)
Q Consensus 459 ~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHi 538 (580)
+|.|.+.. ...|+||+|||.|++ +| ..+||+.|.||+++.|+|++++||.|+||||+
T Consensus 228 rliN~g~~----~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~ 284 (306)
T 1sdd_A 228 HLIGMSSG----PELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLI 284 (306)
T ss_dssp -BBCCCSS----SCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCS
T ss_pred EEEeCCCC----CccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCC
Confidence 99997642 126999999999986 11 35899999999999999999999999999999
Q ss_pred chhhhcccEEEEeccc
Q 008038 539 EPHFHIGMGVVLALGV 554 (580)
Q Consensus 539 l~H~d~GM~~~~~~~~ 554 (580)
++|++.|||++|.+.+
T Consensus 285 ~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 285 PRHFQAGMQAYIDIKN 300 (306)
T ss_dssp TTTGGGTCBCCC----
T ss_pred hHHHhcCCeEEEEEec
Confidence 9999999999998754
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-23 Score=228.59 Aligned_cols=241 Identities=15% Similarity=0.190 Sum_probs=144.1
Q ss_pred CCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC---c-eeeeeEEEcCCceEEEEEEeCCCC----
Q 008038 230 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ---P-FEVDDMDIYSGESYSVLLTTNQDP---- 301 (580)
Q Consensus 230 ~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~---P-~~~d~v~l~pGeR~dv~v~~~~~~---- 301 (580)
...|+|++++|+++++||.|... ..+.+|.||.... .+.||.+.. | ..+....|.|||+++..+++++..
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~ 143 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPEN 143 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCS
T ss_pred CcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCC
Confidence 34578999999999999999875 4678888887664 478998642 1 223456799999999999998742
Q ss_pred Cc----ceEEEEeecCCCCCCCCceE-EEEecCCCCCCCCCCCCCCCCCCCCCCcccccccccc------ccCCCCCCCC
Q 008038 302 SY----NYWISAGVRGRKPATPPALT-LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF------ALMGSPKPPT 370 (580)
Q Consensus 302 ~g----~y~l~~~~~~~~~~~~~~~a-il~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~------~~~~~~~~p~ 370 (580)
+| +||+|+|............+ +|.......... +..|. .+ .++...+. +.. ....
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~-----~~~~~-~~----~e~~l~l~~~d~~~~w~--~~~~- 210 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE-----TNMPV-DM----REFVLLFMVFDEKKSWY--YDKK- 210 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTT-----SCCCS-SC----CEEEEEEEEEEGGGSSC--CC---
T ss_pred CCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccc-----cCCCC-cc----eeEEEEEEeecCccccc--cccC-
Confidence 47 99999986321111112223 333332111100 00011 00 01110010 000 0000
Q ss_pred CcceEEEEEeeeee-cCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEE
Q 008038 371 NFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 449 (580)
Q Consensus 371 ~~~r~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (580)
....+ ...... ......+.|||+.+. .+.+.
T Consensus 211 -~~~~~--~~~~~~~~~~~~~~~iNG~~~~---------------------------------------------~p~l~ 242 (647)
T 1sdd_B 211 -PTRSW--RRASSEVKNSHEFHAINGMIYN---------------------------------------------LPGLR 242 (647)
T ss_dssp ----------------CCCEEEEETTBSSC---------------------------------------------CCCCE
T ss_pred -ccccc--ccCCcchhhcCceeccCCEecC---------------------------------------------CCCeE
Confidence 00000 000000 001235667766430 01277
Q ss_pred ccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCc
Q 008038 450 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP 529 (580)
Q Consensus 450 ~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 529 (580)
++.|++++|+|.|.+.. ...||||+|||.|+|++. ++.++||+.|.||+++.|+|++++|
T Consensus 243 v~~G~~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~----------------d~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 243 MYEQEWVRLHLLNLGGS----RDIHVVHFHGQTLLENGT----------------QQHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp EETTCEEEEEEEECCCT----TCCEEEEETTCCEEECSS----------------SCEEESSEEECTTEEEEEEEECCSS
T ss_pred EcCCCEEEEEEEeCCCC----CcceeEEEcCcEEEEecC----------------CCcccceEEECCCeEEEEEEEeccc
Confidence 88999999999997642 127999999999999865 1357899999999999999999999
Q ss_pred eeeEEeeecchhhhcccEEEEecc
Q 008038 530 GAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 530 G~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|.|+||||+++|++.|||++|.+.
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEE
T ss_pred eEeecccCcccccccccccceeee
Confidence 999999999999999999999874
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=199.27 Aligned_cols=235 Identities=14% Similarity=0.092 Sum_probs=149.7
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|++|.... ..+.+|+||.. +.||.+. ...|.|||++++.+++++ +|+||+||+.
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 46888888863 5688642 224999999999999987 8999999985
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEE
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 390 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~ 390 (580)
.....+ .....+.+.+.+... +|.++ .++...+...+...... ......+............
T Consensus 138 ~~~~~~~~~Gl~G~~iV~~~~~----------~p~~d-----~e~~l~~~d~~~~~~~~--~~g~~~~~~~~~~~~~~~~ 200 (327)
T 1kbv_A 138 APVGMHIANGMYGLILVEPKEG----------LPKVD-----KEFYIVQGDFYTKGKKG--AQGLQPFDMDKAVAEQPEY 200 (327)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC----------CCCCS-----EEEEEEEEEECBSSCTT--CCEEECBCHHHHHHTCCSE
T ss_pred CChhhhhhcceEEEEEEecCCC----------CCCCc-----eEEEEEeeeeeccCccc--cccccccChhHhccCCCce
Confidence 431111 112233343332110 11111 00000000000000000 0000000000000011235
Q ss_pred EEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCC
Q 008038 391 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 470 (580)
Q Consensus 391 ~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~ 470 (580)
+.|||+.+... ....+.++.|++++|+|.|.+..
T Consensus 201 ~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~~~~---- 234 (327)
T 1kbv_A 201 VVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNGGPN---- 234 (327)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEEESS----
T ss_pred EEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECCCCC----
Confidence 67777644110 00137889999999999997642
Q ss_pred CCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchhh-hcccEEE
Q 008038 471 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMGVV 549 (580)
Q Consensus 471 ~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~-d~GM~~~ 549 (580)
..|+||||||.|+|++..++. ..|..+|++.|.||+++.|.|++++||.|++|||+..|. ..||+++
T Consensus 235 -~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~ 302 (327)
T 1kbv_A 235 -LVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQ 302 (327)
T ss_dssp -CCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEE
T ss_pred -CceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEE
Confidence 179999999999999974432 126789999999999999999999999999999999995 8899999
Q ss_pred Eeccc
Q 008038 550 LALGV 554 (580)
Q Consensus 550 ~~~~~ 554 (580)
+.+..
T Consensus 303 l~~~g 307 (327)
T 1kbv_A 303 LKVEG 307 (327)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 97643
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=196.62 Aligned_cols=241 Identities=18% Similarity=0.181 Sum_probs=141.8
Q ss_pred eEEEEecCCEEEEEEeecCC-ceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~-~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|++|... ...|.+++++... +.||.. .. .|.|||++++.+++++ +|+||+|+|.
T Consensus 71 P~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~---~~----~i~PG~~~~y~~~~~~--~Gt~wyH~h~ 138 (340)
T 2bw4_A 71 PLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGA---LT----QVNPGEETTLRFKATK--PGVFVYHCAP 138 (340)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGG---GC----CBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCcc---ce----EeCCCCEEEEEEECCC--CeEEEEEcCC
Confidence 48999999999999999873 2456777776542 223332 21 3999999999999986 8999999996
Q ss_pred cCCC-CC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEE-----EE--eee
Q 008038 312 RGRK-PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLT-----LL--NTQ 382 (580)
Q Consensus 312 ~~~~-~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~-----~~--~~~ 382 (580)
.... .+ .....+.+.+.+...... ....| ..+. .++...+....-........ ..+. +. ...
T Consensus 139 ~~~~~~~~~~Gl~G~~iV~~~~~~~~-~~~~p--~~~d-----~e~~l~l~D~~~~~~~~g~~-~~~~~~~~~~~~~~~~ 209 (340)
T 2bw4_A 139 EGMVPWHVTSGMNGAIMVLPRDGLKD-EKGQP--LTYD-----KIYYVGEQDFYVPKDEAGNY-KKYETPGEAYEDAVKA 209 (340)
T ss_dssp TTCHHHHHHTTCEEEEEEECTBCEEC-TTSCE--ECCS-----EEEEEEEEEECCCBCTTSCB-CCCCSHHHHHHHHHHH
T ss_pred CCchhhHHhCcCEEEEEEccCcCccc-ccCCC--cCcc-----eeEEEeeeeeeeccccCCcc-cccccccccccchhhH
Confidence 4321 01 112233333332111000 00000 0000 00000000000000000000 0000 00 000
Q ss_pred eecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEc
Q 008038 383 NTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 462 (580)
Q Consensus 383 ~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N 462 (580)
........|.|||+.+... ..+.+.++.|++++|++.|
T Consensus 210 ~~~~~~~~~~iNG~~~~~~------------------------------------------~~~~l~v~~G~r~Rl~n~~ 247 (340)
T 2bw4_A 210 MRTLTPTHIVFNGAVGALT------------------------------------------GDHALTAAVGERVLVVHSQ 247 (340)
T ss_dssp HHTTCCSEEEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEE
T ss_pred hhcCCCCEEEECCccCCcc------------------------------------------CCCceEcCCCCEEEEEECC
Confidence 0000113567777654110 0123889999999988877
Q ss_pred CCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEEEEEEEecCceeeEEeeecc-
Q 008038 463 ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFVADNPGAWAFHCHIE- 539 (580)
Q Consensus 463 ~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~v~irf~adnpG~w~~HCHil- 539 (580)
.+.. .|++|+|||.|+|+. +|.+. ++. ++||+.|.||+.+.|.|++++||.|+||||++
T Consensus 248 ~~~~------~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~ 309 (340)
T 2bw4_A 248 ANRD------TRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLI 309 (340)
T ss_dssp SSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHH
T ss_pred CCCc------cceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchH
Confidence 6655 799999999999986 34331 222 47999999999999999999999999999999
Q ss_pred hhhhcccEEEEeccc
Q 008038 540 PHFHIGMGVVLALGV 554 (580)
Q Consensus 540 ~H~d~GM~~~~~~~~ 554 (580)
+|++.|||+.|.+..
T Consensus 310 ~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 310 EAFELGAAGHFKVTG 324 (340)
T ss_dssp HHHTTSCEEEEEEES
T ss_pred HHHhCCCEEEEEECC
Confidence 599999999997643
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-23 Score=231.79 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=149.0
Q ss_pred CCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCC--------
Q 008038 229 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-------- 300 (580)
Q Consensus 229 ~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~-------- 300 (580)
+...|+|+++.|++++++|.|... ..+.+|.||..+....-||.+- ....|.||++++..+++++.
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~ 268 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEF 268 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCC
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCC
Confidence 345679999999999999999864 4788888887765544358742 13468999999999998732
Q ss_pred CCcceEEEEeecCCCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEe
Q 008038 301 PSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLN 380 (580)
Q Consensus 301 ~~g~y~l~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~ 380 (580)
+.|+||+|+|............|.|.+.+.... .... .+. ..++++.+.+
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~--~~~~---~~~-------------------------~~d~E~vl~~ 318 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTL--NPAH---GRQ-------------------------VTVQEFALFF 318 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECSTTS--CSSS---CCC-------------------------CSSEEEECCC
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCccc--cccc---CCC-------------------------ccceEEEEEE
Confidence 469999999864421111222343444322110 0000 000 0112222111
Q ss_pred eeee----------------------------cCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCccc
Q 008038 381 TQNT----------------------------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV 432 (580)
Q Consensus 381 ~~~~----------------------------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~ 432 (580)
.... ......|.|||..+
T Consensus 319 ~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~---------------------------------- 364 (770)
T 2r7e_B 319 TIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIM---------------------------------- 364 (770)
T ss_dssp CEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT----------------------------------
T ss_pred eecCccccchhccchhhcccCccccccCCccccccCCccccCCccC----------------------------------
Confidence 1000 00001233333321
Q ss_pred CCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceE
Q 008038 433 MKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 512 (580)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv 512 (580)
.....+.++.|++++|+|.|.+.. ...||||||||.|+|++.+ +.++||+
T Consensus 365 ----------~~~~~l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv 414 (770)
T 2r7e_B 365 ----------DTLPGLVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALY 414 (770)
T ss_dssp ----------TTCCCCCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEE
T ss_pred ----------CCCCCeEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEE
Confidence 011237789999999999997632 1279999999999998762 1479999
Q ss_pred EeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 513 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.|+||+++.|+|++++||.|+||||+++|++.|||+.|.|
T Consensus 415 ~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 415 NLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp ECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred EECCCeEEEEEEEeCCCCceEEEecccccccccccccccc
Confidence 9999999999999999999999999999999999999987
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=189.14 Aligned_cols=90 Identities=21% Similarity=0.157 Sum_probs=72.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC-ccceEEeCCCcEEEEEEEe
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~-~rDTv~vpp~g~v~irf~a 526 (580)
+.++.|++++|++.|.+.. .|++++|+|.|.|++ +|.+. ..|. ++||+.|.||+.+.|.|++
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEc
Confidence 7889999999887776543 445557788888887 34332 1122 5899999999999999999
Q ss_pred cCceeeEEeeecchhh-hcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHF-HIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~-d~GM~~~~~~~~ 554 (580)
++||.|+||||++.|+ +.|||++|.+..
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 9999999999999997 999999997743
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=189.02 Aligned_cols=235 Identities=11% Similarity=0.060 Sum_probs=149.2
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|+++.|+++++||.|.... ..+.+|+||+. ..||... +..|.||+++++.+++++ +|+||+|||.
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 379999999999999998642 47889999965 3577642 235999999999999976 8999999974
Q ss_pred cCCCCC-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeecCCeEE
Q 008038 312 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 390 (580)
Q Consensus 312 ~~~~~~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~ 390 (580)
.....+ .....+.+.+.+... .|.++ .++...+.......... . .....+............
T Consensus 128 ~~~~~~~~~Gl~G~~iv~~~~~----------~~~~d-----~e~~l~l~d~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 190 (442)
T 2zoo_A 128 APVGMHIANGMYGLILVEPKEG----------LAPVD-----REYYLVQGDFYTKGEFG-E-AGLQPFDMAKAIDEDADY 190 (442)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC----------CCCCS-----EEEEEEEEEECBSSCTT-C-CEEECBCHHHHHTTCCSE
T ss_pred CChHHHHhCccEEEEEEeCCCC----------CCCCC-----ceEEEEeeeeeccCccc-c-cccccCChhHhccCCCCE
Confidence 321111 122345555543211 01110 01110110000000000 0 000000000000011234
Q ss_pred EEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEccCCcEEEEEEEcCCCCCCCC
Q 008038 391 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 470 (580)
Q Consensus 391 ~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~l~N~~~~~~~~ 470 (580)
+.|||+.+... ....+.++.|++++|+|.|.+..
T Consensus 191 ~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~~---- 224 (442)
T 2zoo_A 191 VVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGPN---- 224 (442)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEESS----
T ss_pred EEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCCC----
Confidence 56666543100 00127889999999999996532
Q ss_pred CCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEecCceeeEEeeecchh-hhcccEEE
Q 008038 471 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMGVV 549 (580)
Q Consensus 471 ~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H-~d~GM~~~ 549 (580)
..|+||+||+.|.|++..++ . ..|.+.|++.|.||+...|.|++++||.|++|||...| ...||+++
T Consensus 225 -~~~~~~i~g~~~~vi~~DG~-~----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~ 292 (442)
T 2zoo_A 225 -LVSSFHVIGEIFDTVYVEGG-S----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292 (442)
T ss_dssp -CCEEEEEETCCBSEEEGGGS-S----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEE
T ss_pred -CceeeEEcCCEEEEEecCCc-c----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEE
Confidence 17999999999999987432 1 12578999999999999999999999999999999999 59999999
Q ss_pred Eeccc
Q 008038 550 LALGV 554 (580)
Q Consensus 550 ~~~~~ 554 (580)
|.+..
T Consensus 293 l~v~~ 297 (442)
T 2zoo_A 293 LKVEG 297 (442)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 96543
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=5.3e-18 Score=174.37 Aligned_cols=221 Identities=20% Similarity=0.214 Sum_probs=140.0
Q ss_pred eEEEEecCCEEEEEEeecCCc-eeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEee
Q 008038 233 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 233 ~~~~v~~Ge~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++|++++|+++++|+.|.... ..|.++++++.. .||.. +. . .|.||+++++.+++++ +|+||+|+|.
T Consensus 65 P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~~y~f~~~~--~Gt~~yH~h~ 132 (336)
T 1oe1_A 65 PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQATLRFKADR--SGTFVYHCAP 132 (336)
T ss_dssp CCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEEEEEEECCC--CeEEEEecCC
Confidence 479999999999999998642 467888888752 23332 21 1 3999999999999976 8999999996
Q ss_pred cCCCC-C-CCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCCCCCcceEEEEEeeeeec----
Q 008038 312 RGRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI---- 385 (580)
Q Consensus 312 ~~~~~-~-~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~---- 385 (580)
..... + .....+.+.+.+...... . .+. +...++++.+.......
T Consensus 133 ~~~~~~~~~~Gl~G~liV~~~~~~~~-~--~~~--------------------------~~~~D~e~~l~~~D~~~~~~~ 183 (336)
T 1oe1_A 133 EGMVPWHVVSGMSGTLMVLPRDGLKD-P--QGK--------------------------PLHYDRAYTIGEFDLYIPKGP 183 (336)
T ss_dssp TTCHHHHHHTTCEEEEEEECTTCCBC-T--TSC--------------------------BCCCSEEEEEEEEEECCCBCT
T ss_pred CCchhHHHhCCCeEEEEEecCcCCcc-c--ccC--------------------------cccCCceeEeeeeeeeecccc
Confidence 43210 1 122234343332111000 0 000 00112333222211000
Q ss_pred -----------------------CCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCcc
Q 008038 386 -----------------------NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT 442 (580)
Q Consensus 386 -----------------------~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~ 442 (580)
.....+.|||+.+..
T Consensus 184 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~------------------------------------------ 221 (336)
T 1oe1_A 184 DGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGAL------------------------------------------ 221 (336)
T ss_dssp TSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTT------------------------------------------
T ss_pred CCceeecccccccccchhhHhhcCCCCEEEECCeeccC------------------------------------------
Confidence 001134444432210
Q ss_pred CCceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCC--ccceEEeCCCcEE
Q 008038 443 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWT 520 (580)
Q Consensus 443 ~~~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~--~rDTv~vpp~g~v 520 (580)
.+...+.++.|++++|+..+.+.. .+++++|||.|.|+. +|.+- .|. +.||+.|++|+.+
T Consensus 222 ~~~~~l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~ 283 (336)
T 1oe1_A 222 TGANALTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAG 283 (336)
T ss_dssp SGGGCEEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEE
T ss_pred CCCcceEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcE
Confidence 011348899999999866555443 566678999999985 44331 222 4699999999999
Q ss_pred EEEEEecCceeeEEeeecchhh-hcccEEEEeccc
Q 008038 521 ALRFVADNPGAWAFHCHIEPHF-HIGMGVVLALGV 554 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~-d~GM~~~~~~~~ 554 (580)
.+.+++++||.|+||||.+.|. +.||+++|.+..
T Consensus 284 dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 284 AALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEEEEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 9999999999999999999986 999999997743
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.1e-16 Score=164.35 Aligned_cols=252 Identities=10% Similarity=-0.025 Sum_probs=162.0
Q ss_pred eEEEEEEEEEEEeCCCC-----------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccCCC
Q 008038 31 TRHYKWEVEYMFWSPDC-----------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLGTP 98 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~~~ 98 (580)
.+++.|.++.-....+| .....++|||+. .|+|+|++| ++++|+.|........+|+ ||..... .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45788888766555443 335689999984 799999999 9999999996667889999 8866542 4
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccE------------EEEEEEcCCCCCCCCCC
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLY------------GSLIVDVADGEKEPFHY 161 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~------------G~liV~~~~~~~~p~~~ 161 (580)
..||.+ .+....|.|||+++..+++.+.|+||++++........+. ..+-+...... .+.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL-PLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCC-C----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC-cCc--
Confidence 689964 2457889999999999999888999999985433211111 11111111000 000
Q ss_pred CcceEEEEeecccCchHHHHhhhcCCC-CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecC
Q 008038 162 DGEFNLLLSDWWHRSVHEQEVGLSSRP-LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 240 (580)
Q Consensus 162 d~e~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 240 (580)
..+.+..|..+...+. .... ..+... ..++|||+.+.. ..+.+.++.|
T Consensus 306 ~~~~p~~L~~~~~~~~-------~~~~~~~~~l~-~~~~iNg~~f~~-----------------------~~~~~~~~~G 354 (451)
T 2uxt_A 306 TDSLPMRLLPTEIMAG-------SPIRSRDISLG-DDPGINGQLWDV-----------------------NRIDVTAQQG 354 (451)
T ss_dssp --CCCSCSSSSCCCCC-------CCSEEEEEEEC-SSSSBTTBCCCT-----------------------TCCCEEEETT
T ss_pred cccCccccCCCCCCCC-------CCcceEEEEEe-eEEEECCEeCCC-----------------------CCCcEEcCCC
Confidence 0000000000000000 0000 000000 046789887651 1225889999
Q ss_pred CEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc---CceeeeeEEEcCCceEEEEEEeCCCCCcc----eEEEEeecC
Q 008038 241 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---QPFEVDDMDIYSGESYSVLLTTNQDPSYN----YWISAGVRG 313 (580)
Q Consensus 241 e~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~g~----y~l~~~~~~ 313 (580)
++++|+|+|. ..|.||||||.|+|++.||.+. +|...|+|.| |+++.|.+++++ +|. |.+|||...
T Consensus 355 ~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn--pg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 355 TWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ--PSWAHFPFYFNSQTLE 427 (451)
T ss_dssp CEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS--CCBTTBCEEEEESSHH
T ss_pred CEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC--CCCCCCceEEeCCchh
Confidence 9999999997 4799999999999999999876 4778999999 999999999986 445 999999754
Q ss_pred CCCCCCCceEEEEec
Q 008038 314 RKPATPPALTLLNYH 328 (580)
Q Consensus 314 ~~~~~~~~~ail~y~ 328 (580)
.. .....+.+.+.
T Consensus 428 H~--d~GMm~~~~v~ 440 (451)
T 2uxt_A 428 MA--DRGSIGQLLVN 440 (451)
T ss_dssp HH--HTTCEEEEEEE
T ss_pred HH--hCCCcEEEEEc
Confidence 32 22345556655
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-15 Score=161.61 Aligned_cols=245 Identities=14% Similarity=0.098 Sum_probs=164.5
Q ss_pred eEEEEEEEEEEEeCCC------------CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCC
Q 008038 31 TRHYKWEVEYMFWSPD------------CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTP 98 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~------------g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~ 98 (580)
.+++.|.++.-....+ |.....+++||+. .|.|+|++| ++++|+.|........+|++|..... .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 4677777765433321 3345689999986 799999999 99999999966668899999977643 4
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc---ccc--------------EEEEEEEcCCC-C
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS---AGL--------------YGSLIVDVADG-E 155 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~---~Gl--------------~G~liV~~~~~-~ 155 (580)
+.||.+ .+....|.|||+++..+++.++|.||++|+...... .|| ....++.-... .
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 302 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK 302 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc
Confidence 679865 234578999999999999988999999998321100 122 12222221111 1
Q ss_pred CCCCCCCcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEE
Q 008038 156 KEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 235 (580)
Q Consensus 156 ~~p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (580)
..++.. .. ..+.++..... .....+.. ......+.|||+.+.. ....+
T Consensus 303 ~~~~p~--~l-~~~~~l~~~~~-~r~~~l~~-----~~~g~~~~iNg~~~~~-----------------------~~~~~ 350 (439)
T 2xu9_A 303 PLPLPK--AL-SPFPTLPAPVV-TRRLVLTE-----DMMAARFFINGQVFDH-----------------------RRVDL 350 (439)
T ss_dssp CCCCCS--CC-CCCCCCCCCSE-EEEEEEEE-----EGGGTEEEETTBCCCT-----------------------TCCCE
T ss_pred cccCcc--cC-CCcccCCCCCc-ceEEEEEe-----eccCceEeECCEECCC-----------------------CCCce
Confidence 111110 00 00000000000 00000000 0011368899998651 11247
Q ss_pred EEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 236 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 236 ~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.++.|++++|+|.|.+. ..|.||||||.|+|++.+|... .|...|++.|.||+++.+.++++. +|.|.+|||...
T Consensus 351 ~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn--pG~w~~HCHil~ 426 (439)
T 2xu9_A 351 KGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE--KGRTVFHCHIVE 426 (439)
T ss_dssp EECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred ecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC--CCCEEEECCcch
Confidence 89999999999999874 4799999999999999999876 588899999999999999999776 899999999743
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-14 Score=156.47 Aligned_cols=286 Identities=12% Similarity=0.131 Sum_probs=172.8
Q ss_pred EEEEEEEEEEeCCCCc-----eeEEEEEcCCCC--------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC
Q 008038 33 HYKWEVEYMFWSPDCK-----ESIVMGINGQFP--------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW 99 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~ 99 (580)
++.|.++.-....++. ....++|||+.. .|+|+|++|+++++||.|........+|++|..... ..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5667776655444432 245789999753 289999999999999999965667899999876543 46
Q ss_pred CCCCC----CCccccCCCCCeEEEEEEcC-CCcceeeecCcc--hh-----hccccEEEEEEEcCCCCCCCCCCCcceEE
Q 008038 100 ADGTA----SISQCPINPGETYLYRFKVD-KAGTYFYHGHLG--MQ-----RSAGLYGSLIVDVADGEKEPFHYDGEFNL 167 (580)
Q Consensus 100 ~DG~~----~~~q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~--~~-----~~~Gl~G~liV~~~~~~~~p~~~d~e~~l 167 (580)
.||.+ .+....|.|||+++..+++. .+|+||.+++.. .. ...|+..+++.........|.........
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~ 301 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 301 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC
Confidence 78864 23456789999999999995 479999999843 11 23345445554432221111100000000
Q ss_pred EEeecccCchH--HHHhh-hc-CCCCCC--C--CCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEE
Q 008038 168 LLSDWWHRSVH--EQEVG-LS-SRPLRW--I--GEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILH 236 (580)
Q Consensus 168 ~~~d~~~~~~~--~~~~~-~~-~~~~~~--~--~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (580)
.+.++...+.. ..... .. .....+ . .....|+|||+.+..-... ..+. + ...+. .-......+.
T Consensus 302 ~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~-g-~~~~~---~~~~~~~~~~ 376 (503)
T 1hfu_A 302 QLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMS-G-AQSAN---DLLPAGSVYE 376 (503)
T ss_dssp BCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHT-T-CCSGG---GSSSTTSEEE
T ss_pred CCccccccccCccCCCCcccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhc-C-Ccccc---cCCCCceEEE
Confidence 00010000000 00000 00 000000 0 0112688999987521100 0000 0 00000 0011234789
Q ss_pred EecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc----CceeeeeEEE-cCCceEEEEEEeCCCCCcceEEEEee
Q 008038 237 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDI-YSGESYSVLLTTNQDPSYNYWISAGV 311 (580)
Q Consensus 237 v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v----~P~~~d~v~l-~pGeR~dv~v~~~~~~~g~y~l~~~~ 311 (580)
++.|++|+++|+|......|.||||||.|+|++.+|... .|...|++.| .+|+++.+.+++++ +|.|.+|||.
T Consensus 377 v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn--PG~W~~HCHi 454 (503)
T 1hfu_A 377 LPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN--PGPWFFHCHI 454 (503)
T ss_dssp ECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS--CEEEEEEESS
T ss_pred ccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC--CeeeeEecCc
Confidence 999999999999543355799999999999999998752 5889999999 89999999999887 8999999997
Q ss_pred cCCCCCCCCceEEEEec
Q 008038 312 RGRKPATPPALTLLNYH 328 (580)
Q Consensus 312 ~~~~~~~~~~~ail~y~ 328 (580)
.... .....+.+.+.
T Consensus 455 l~H~--~~GM~~~~~v~ 469 (503)
T 1hfu_A 455 EFHL--MNGLAIVFAED 469 (503)
T ss_dssp HHHH--HTTCEEEEEEC
T ss_pred hhHh--hCCCeEEEEEC
Confidence 4432 12334445554
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-14 Score=155.44 Aligned_cols=281 Identities=13% Similarity=0.156 Sum_probs=170.2
Q ss_pred EEEEEEEEEEeCCCCc----------eeEEEEEcCCCC---------CCeEEecCCCEEEEEEEeCCCCCceeeeecccc
Q 008038 33 HYKWEVEYMFWSPDCK----------ESIVMGINGQFP---------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR 93 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~----------~~~~~~~NG~~p---------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~ 93 (580)
++.|.++.-....++. ....++|||+.. -|+|+|++|+++++|+.|........+|++|..
T Consensus 164 e~~l~l~D~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~ 243 (521)
T 1v10_A 164 STVITIADWYHSLSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHR 243 (521)
T ss_dssp GGEEEEEEECSSCCC-------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred eeEEEEcccccCCHHHHhhccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCe
Confidence 4566665544333322 235789999743 189999999999999999965667899999976
Q ss_pred ccCCCCCCCCC----CCccccCCCCCeEEEEEEcC-CCcceeeecCcch---hhccccEEEEEEEcCCCCCCCCCCCcce
Q 008038 94 QLGTPWADGTA----SISQCPINPGETYLYRFKVD-KAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEF 165 (580)
Q Consensus 94 ~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~-~~Gt~wYH~H~~~---~~~~Gl~G~liV~~~~~~~~p~~~d~e~ 165 (580)
... ...||.+ .+....|.|||+++..+++. .+|+||.+++... ....|+..+++.........|......
T Consensus 244 ~~v-i~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~- 321 (521)
T 1v10_A 244 MTV-IEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNS- 321 (521)
T ss_dssp EEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCC-
T ss_pred EEE-EecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCc-
Confidence 543 4679865 23457799999999999995 4799999998431 223345445555432221111110000
Q ss_pred EEEEeecccCchH--HH---------HhhhcCCCCCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCC
Q 008038 166 NLLLSDWWHRSVH--EQ---------EVGLSSRPLRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCA 231 (580)
Q Consensus 166 ~l~~~d~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (580)
...+.+....+.. .. ...+. ...........|.|||+.+..-... ..+. +. ..+. +-...
T Consensus 322 ~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~-l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~-g~-~~~~---~~~~~ 395 (521)
T 1v10_A 322 GTALNEANLIPLINPGAPGNPVPGGADINLN-LRIGRNATTADFTINGAPFIPPTVPVLLQILS-GV-TNPN---DLLPG 395 (521)
T ss_dssp SCBCCGGGCCBSSCCCCSSCSSTTCSSEEEE-CCEECCSSSSCCEESSCCCCCCSSCHHHHHHH-TC-CCGG---GSSST
T ss_pred ccccchhhcccCCcccCCCcccCCcceEEEE-EEEecCCceeEEEECCCcccCCCCchhhhhhc-CC-cccc---cCCCC
Confidence 0000000000000 00 00000 0000001112678999987521100 0000 00 0000 00112
Q ss_pred ceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcc----cCceeeeeEEE-cCCceEEEEEEeCCCCCcceE
Q 008038 232 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY----VQPFEVDDMDI-YSGESYSVLLTTNQDPSYNYW 306 (580)
Q Consensus 232 ~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~----v~P~~~d~v~l-~pGeR~dv~v~~~~~~~g~y~ 306 (580)
...+.++.|++|+++|+| ...|.||||||.|+|++.+|.. ..|...|++.| .+|+++.+.+++++ +|.|.
T Consensus 396 ~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN--PG~W~ 470 (521)
T 1v10_A 396 GAVISLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN--PGPWF 470 (521)
T ss_dssp TTEEEECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS--CEEEE
T ss_pred ceEEEecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC--CeeEE
Confidence 347899999999999999 3479999999999999999875 25889999999 89999999999887 89999
Q ss_pred EEEeecCCCCCCCCceEEEEec
Q 008038 307 ISAGVRGRKPATPPALTLLNYH 328 (580)
Q Consensus 307 l~~~~~~~~~~~~~~~ail~y~ 328 (580)
+|||..... .....+.+.+.
T Consensus 471 ~HCHi~~H~--~~GM~~~~~v~ 490 (521)
T 1v10_A 471 LHCHIDWHL--EAGLAVVFAED 490 (521)
T ss_dssp EEESCHHHH--TTTCEEEEEES
T ss_pred EeeChHHHH--hCCCeEEEEEC
Confidence 999974432 22334445554
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-15 Score=129.06 Aligned_cols=88 Identities=31% Similarity=0.410 Sum_probs=70.9
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCC--CCCCCCCCCccccCCCCCeEEEEEEc-CCCcceeeecC
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT--PWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGH 134 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~--~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H 134 (580)
+|++|+|++++||+|+ ++|. ...++++||||...+.. ..+||.+ .+++.|.||++++|+|++ .++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~-~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNN-KLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEEC-SSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred EEeCCEEEEcCCCEEE--EEEC-CCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 6778999999999975 6799 67899999999865321 0122222 246789999999999999 79999999999
Q ss_pred cchhhccccEEEEEEEc
Q 008038 135 LGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~~ 151 (580)
.|...||.|.|+|++
T Consensus 91 --~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 --PHRGAGMVGKITVEG 105 (105)
T ss_dssp --TTGGGTCEEEEEECC
T ss_pred --CchhcCCEEEEEEcC
Confidence 677889999999964
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-13 Score=143.57 Aligned_cols=245 Identities=11% Similarity=0.088 Sum_probs=163.0
Q ss_pred EEEEEEEEEEEeCCCCc-------------eeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCC
Q 008038 32 RHYKWEVEYMFWSPDCK-------------ESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTP 98 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g~-------------~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~ 98 (580)
.+| |.++......+|. ....+++||+. .|+|.|++|+ ++|+.|........+|++|..... .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 556 7777766655543 34578999985 6899999999 999999977788999999987543 5
Q ss_pred CCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhh--------ccccEEEEEEEcCCCCCCCC-----C
Q 008038 99 WADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR--------SAGLYGSLIVDVADGEKEPF-----H 160 (580)
Q Consensus 99 ~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~--------~~Gl~G~liV~~~~~~~~p~-----~ 160 (580)
+.||.. .+....|.|||+++..+++.+.|+|...++..... ......-+.+... +...|. .
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~~l~~~~ 334 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPKNLKIFK 334 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECSSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCSCSCCCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcCCCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCccccCCC
Confidence 778732 23567899999999999998888887776532210 0001111222211 111110 0
Q ss_pred ----CCcceEEEEeecccCchHHHHhhhcCCCCCC--CCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceE
Q 008038 161 ----YDGEFNLLLSDWWHRSVHEQEVGLSSRPLRW--IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQI 234 (580)
Q Consensus 161 ----~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (580)
.+.+..+.++....+ ...+...+... ......++|||+.+.. ..+.
T Consensus 335 ~~~~~~~~r~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-----------------------~~~~ 386 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQ-----MHGMMGKSEGELKIALASMFLINRKSYDL-----------------------KRID 386 (481)
T ss_dssp CCCCCCEEEEEEEEECCST-----TTTGGGCCHHHHHHHHHTTEEETTBCCCT-----------------------TCCC
T ss_pred CCCCCCcEEEEEEeccchh-----cccccccccccccccccceeEECCEeCCC-----------------------CCce
Confidence 012223333221100 00000000000 0001248999998651 1235
Q ss_pred EEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEE--CCccc---CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 235 LHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA--DGNYV---QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 235 ~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~--DG~~v---~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
+.++.|++++|+|+|.+ ...|.||||||.|+|++. ||... ++...|+|.|.|||++.|.++++. +|.|.+||
T Consensus 387 ~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~--pG~w~~HC 463 (481)
T 3zx1_A 387 LSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF--KGLRMYHC 463 (481)
T ss_dssp EEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS--CEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC--CeeEEEEc
Confidence 89999999999999976 458999999999999999 99866 357899999999999999999976 89999999
Q ss_pred eecC
Q 008038 310 GVRG 313 (580)
Q Consensus 310 ~~~~ 313 (580)
|...
T Consensus 464 Hil~ 467 (481)
T 3zx1_A 464 HILE 467 (481)
T ss_dssp SSHH
T ss_pred CChH
Confidence 8644
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-13 Score=144.99 Aligned_cols=256 Identities=14% Similarity=0.161 Sum_probs=156.8
Q ss_pred eEEEEEcCCC---------CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCe
Q 008038 50 SIVMGINGQF---------PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGET 116 (580)
Q Consensus 50 ~~~~~~NG~~---------pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~ 116 (580)
...++|||+- +-|.|+|++|+++++|+.|........+|++|..... ...||.+ .+....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4689999962 3479999999999999999856667889998876543 4678865 234578999999
Q ss_pred EEEEEEcC-CCcceeeecCcc--h-hhccccEEEEEEEcCCCCCCCCCCCcce-EEEEeecccCchHHHH-hh--hc-CC
Q 008038 117 YLYRFKVD-KAGTYFYHGHLG--M-QRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQE-VG--LS-SR 187 (580)
Q Consensus 117 ~~y~f~~~-~~Gt~wYH~H~~--~-~~~~Gl~G~liV~~~~~~~~p~~~d~e~-~l~~~d~~~~~~~~~~-~~--~~-~~ 187 (580)
++..++++ ..|.||.++... . ....|...+++.........|....... ...+.+....+..... .. .. ..
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~ 326 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGA 326 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCCC
Confidence 99999995 459999998732 1 1223343455555432211121100000 0000011110000000 00 00 00
Q ss_pred C----CCCCCCCceEEeCccCCCCccc---cccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEE
Q 008038 188 P----LRWIGEPQTLLINGRGQFNCSL---AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 260 (580)
Q Consensus 188 ~----~~~~~~~~~~liNG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i 260 (580)
. ..+......|+|||+.+..-.. ...+. +... ..+......++.++.|++|+|.|.|......|.||+
T Consensus 327 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~-g~~~----~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HL 401 (495)
T 3t6v_A 327 DCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICS-GANT----AADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHL 401 (495)
T ss_dssp SEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHT-TCCS----STTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEE
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhc-CCcC----cccccCCcceEEecCCCEEEEEEccCCCCCCcceee
Confidence 0 0000012368899987642100 00000 0000 000011234789999999999998433345799999
Q ss_pred eCeeeEEEEECCccc----CceeeeeEEEcC-CceEEEEEEeCCCCCcceEEEEeecC
Q 008038 261 KNHKMVVVEADGNYV----QPFEVDDMDIYS-GESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 261 ~gh~~~via~DG~~v----~P~~~d~v~l~p-GeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
|||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ +|.|.+|||...
T Consensus 402 HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn--PG~W~~HCHi~~ 457 (495)
T 3t6v_A 402 HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN--PGPWFLHCHIDW 457 (495)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS--CEEEEEEESCHH
T ss_pred cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC--CeeEEEEecchh
Confidence 999999999988654 588999999997 999999999887 899999999643
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-12 Score=139.23 Aligned_cols=255 Identities=9% Similarity=0.076 Sum_probs=152.9
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcCC
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVDK 125 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~~ 125 (580)
...++|||+. .|+|+|++|+++++||.|........+|++|..+.. ...||.+ .+....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4588999985 699999999999999999966667889998876543 4678865 234577999999999999943
Q ss_pred --CcceeeecCcchhh----c--cccEEEEEEEcCCCCCCCCCC-CcceEEEEeecccCch----------HHHHhhhcC
Q 008038 126 --AGTYFYHGHLGMQR----S--AGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSV----------HEQEVGLSS 186 (580)
Q Consensus 126 --~Gt~wYH~H~~~~~----~--~Gl~G~liV~~~~~~~~p~~~-d~e~~l~~~d~~~~~~----------~~~~~~~~~ 186 (580)
.|.||......... . .......+++-..+...|... ..+....+.|....+. ..+...+..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 57899988743211 0 012222233221111111000 0000000000000000 000000000
Q ss_pred CCCCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCe
Q 008038 187 RPLRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 263 (580)
Q Consensus 187 ~~~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh 263 (580)
... ......++|||+.+..-... ..+..+ ....+...- ......+.++.|++++|.|.|.+. ..|.||||||
T Consensus 325 ~~~--~~~~~~~~iNg~s~~~~~~P~L~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh 399 (534)
T 1zpu_A 325 DNL--KNGVNYAFFNNITYTAPKVPTLMTVLSSG-DQANNSEIY-GSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGH 399 (534)
T ss_dssp EEC--TTSCEEEEETTBCCCCCSSCHHHHHTTSG-GGTTCGGGG-CSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTC
T ss_pred ecc--CCceeEEEECCCcccCCCCCceeeecccC-cccCCCccc-CCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCC
Confidence 000 01124678999876421100 000000 000000000 011236889999999999999874 4799999999
Q ss_pred eeEEEEECCc--------------------ccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 264 KMVVVEADGN--------------------YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 264 ~~~via~DG~--------------------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
.|+|++.++. ...|...|+|.|.+|+.+.+.+++++ +|.|.+|||...
T Consensus 400 ~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN--PG~W~~HCHi~~ 467 (534)
T 1zpu_A 400 AFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN--PGVWFFHCHIEW 467 (534)
T ss_dssp CEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS--CEEEEEEECCHH
T ss_pred ceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC--CeeEEEEeCchh
Confidence 9999999853 12477899999999999999999887 899999999644
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.8e-13 Score=144.48 Aligned_cols=255 Identities=14% Similarity=0.157 Sum_probs=154.9
Q ss_pred eEEEEEcCCC--------CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 50 SIVMGINGQF--------PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 50 ~~~~~~NG~~--------pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
...++|||+- +-|.|+|++|+++++||.|........+|++|..... ...||.+ .+....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4689999963 3479999999999999999966667899999977643 4678865 2345679999999
Q ss_pred EEEEEcC-CCcceeeecCcc--hh-hccccEEEEEEEcCCCCCCCCCC-CcceEEEEeecccCchHHH-Hhh--hc-CCC
Q 008038 118 LYRFKVD-KAGTYFYHGHLG--MQ-RSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQ-EVG--LS-SRP 188 (580)
Q Consensus 118 ~y~f~~~-~~Gt~wYH~H~~--~~-~~~Gl~G~liV~~~~~~~~p~~~-d~e~~l~~~d~~~~~~~~~-~~~--~~-~~~ 188 (580)
+..++++ ..|.||..+... .+ ...|..-+++.........|... .... ..+.+....+.... ... .. ...
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 9999995 459999988632 11 12233234444432221112110 0000 00001111000000 000 00 000
Q ss_pred ----CCCCCCCceEEeCccCCCCcccc---ccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeec--CCceeEEEE
Q 008038 189 ----LRWIGEPQTLLINGRGQFNCSLA---AHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST--TALASLNLA 259 (580)
Q Consensus 189 ----~~~~~~~~~~liNG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNa--g~~~~~~~~ 259 (580)
..+......|+|||+.+..-... ..+. +.. + ..+......++.++.|++|+|.|.|. .....|.||
T Consensus 324 ~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~-g~~---~-~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~H 398 (499)
T 3pxl_A 324 KAINMAFNFNGSNFFINGASFVPPTVPVLLQILS-GAQ---T-AQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFH 398 (499)
T ss_dssp EEEECCEEECSSCEEETTBCCCCCSSCHHHHHHT-TCC---S-TTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEE
T ss_pred EEEEEEEEecCcEEEEcCEecCCCCCchhhhhhc-CCc---c-ccccCCCceeEEecCCCEEEEEEecCcccCCCCccce
Confidence 00001123678999876411000 0000 000 0 00001123478999999999999942 223469999
Q ss_pred EeCeeeEEEEECCccc----CceeeeeEEEcC---CceEEEEEEeCCCCCcceEEEEeecC
Q 008038 260 VKNHKMVVVEADGNYV----QPFEVDDMDIYS---GESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 260 i~gh~~~via~DG~~v----~P~~~d~v~l~p---GeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
+|||.|.|++.+|... .|...|++.|.+ |+.+.+.+++++ +|.|.+|||...
T Consensus 399 LHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn--PG~W~~HCHi~~ 457 (499)
T 3pxl_A 399 LHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN--PGPWFLHCHIDF 457 (499)
T ss_dssp ETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS--CEEEEEEESSHH
T ss_pred ecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC--CceEEEEeCChh
Confidence 9999999999888643 588999999986 999999999887 999999999643
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.47 E-value=8.5e-13 Score=140.81 Aligned_cols=255 Identities=13% Similarity=0.063 Sum_probs=161.6
Q ss_pred EEEEEEEEEEEeCCCC--------------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccC
Q 008038 32 RHYKWEVEYMFWSPDC--------------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLG 96 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~ 96 (580)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++++|+.|........+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4677888766554444 234578999985 588876 6789999999996667788888 6765432
Q ss_pred CCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchh----hc--cccEEEEEEEc---CCCCCCC----
Q 008038 97 TPWADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ----RS--AGLYGSLIVDV---ADGEKEP---- 158 (580)
Q Consensus 97 ~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~----~~--~Gl~G~liV~~---~~~~~~p---- 158 (580)
...||.. .+....|.|||+++..+++.+.++|+.-+..... .. ..-.-.+-|.+ +.....|
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~ 307 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS 307 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEECTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeCCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc
Confidence 4679853 2456789999999999999878888776552111 10 11111222222 0111111
Q ss_pred -CC--------CCcceEEEEee-cccCchHHHHh--------hh-----cC---CC-CCC--C----CCCceEEeCccCC
Q 008038 159 -FH--------YDGEFNLLLSD-WWHRSVHEQEV--------GL-----SS---RP-LRW--I----GEPQTLLINGRGQ 205 (580)
Q Consensus 159 -~~--------~d~e~~l~~~d-~~~~~~~~~~~--------~~-----~~---~~-~~~--~----~~~~~~liNG~~~ 205 (580)
+. ..+++.+.+.. +.......++. .+ .. .+ +.. . .....|+|||+.+
T Consensus 308 ~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~ 387 (488)
T 3od3_A 308 SLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAF 387 (488)
T ss_dssp CCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCC
T ss_pred cCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeC
Confidence 00 01334444321 00000000000 00 00 00 000 0 0012479999987
Q ss_pred CCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCc---eeeee
Q 008038 206 FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDD 282 (580)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P---~~~d~ 282 (580)
.. ..+.++++.|++++|+|+|.+....|.||||||.|+|++.||....+ ...|+
T Consensus 388 ~~-----------------------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDT 444 (488)
T 3od3_A 388 DM-----------------------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDT 444 (488)
T ss_dssp CT-----------------------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSE
T ss_pred CC-----------------------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeE
Confidence 51 12358899999999999999865579999999999999999987754 46899
Q ss_pred EEEcCCceEEEEEEeCCC--CCcceEEEEeecC
Q 008038 283 MDIYSGESYSVLLTTNQD--PSYNYWISAGVRG 313 (580)
Q Consensus 283 v~l~pGeR~dv~v~~~~~--~~g~y~l~~~~~~ 313 (580)
|.|. |+++.|+|+++.. .+|.|.+|||...
T Consensus 445 V~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~ 476 (488)
T 3od3_A 445 VKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLE 476 (488)
T ss_dssp EEES-SSEEEEEECBCSCCCGGGCEEEEESSHH
T ss_pred EEeC-CCEEEEEEEeccCCCCCCCEEEeCCchH
Confidence 9999 9999999999762 2578999999643
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-12 Score=141.57 Aligned_cols=244 Identities=11% Similarity=0.052 Sum_probs=143.5
Q ss_pred eEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc-C-CCcceeeecCcc
Q 008038 63 TIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV-D-KAGTYFYHGHLG 136 (580)
Q Consensus 63 ~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~-~-~~Gt~wYH~H~~ 136 (580)
+|+|++|+++++||.|........+|++|..... ...||.+ .+....|.|||+++..+++ . .+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999966667889999976543 4678854 2345789999999999999 4 489999999854
Q ss_pred hhh-ccc-cEEEEEEEcCCCCCCCCCCCcceEEEEeecccCc-hHHH-HhhhcC-----CCCC------C------CCCC
Q 008038 137 MQR-SAG-LYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRS-VHEQ-EVGLSS-----RPLR------W------IGEP 195 (580)
Q Consensus 137 ~~~-~~G-l~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~-~~~~-~~~~~~-----~~~~------~------~~~~ 195 (580)
.-. ... ..+.|-.........|........ .|.... .... +..+.. .+.. + ....
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 359 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTP----AWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCC----CTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCC----ccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCe
Confidence 210 111 122333322221011100000000 000000 0000 000000 0000 0 0012
Q ss_pred ceEEeCccCCCCcc--c-cc-------cccCC----CcccccccC------CCCCCceEEEEecCCEEEEEEeecCC---
Q 008038 196 QTLLINGRGQFNCS--L-AA-------HFSNG----SAEQCKLRG------NEQCAPQILHVQPNKTYRLRIASTTA--- 252 (580)
Q Consensus 196 ~~~liNG~~~~~~~--~-~~-------~~~~~----~~~~~~~~~------~~~~~~~~~~v~~Ge~~rlRliNag~--- 252 (580)
..+.|||+.+..-. + .. .|+.. ....|.-.. ........+.++.|++++|.|.|.+.
T Consensus 360 ~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~ 439 (552)
T 1aoz_A 360 VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKE 439 (552)
T ss_dssp EEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSST
T ss_pred EEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccccc
Confidence 24788888653110 0 00 00000 000000000 00001235889999999999999874
Q ss_pred --ceeEEEEEeCeeeEEEEEC-Ccc----------cCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 253 --LASLNLAVKNHKMVVVEAD-GNY----------VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 253 --~~~~~~~i~gh~~~via~D-G~~----------v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
...|.||||||.|+|++.. |.+ ..|...|++.|.+|+.+.+.+++++ +|.|.+|||...
T Consensus 440 ~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN--PG~W~~HCHi~~ 511 (552)
T 1aoz_A 440 NLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN--PGVWAFHCHIEP 511 (552)
T ss_dssp TCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS--CEEEEEEESSHH
T ss_pred ccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC--CeEEEEEeeehh
Confidence 3469999999999999984 553 2578899999999999999999987 899999999754
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-13 Score=121.76 Aligned_cols=100 Identities=22% Similarity=0.335 Sum_probs=74.7
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC------CCCc-cccCCCCC--e
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT------ASIS-QCPINPGE--T 116 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~------~~~~-q~~i~pG~--~ 116 (580)
.+...+...++|. ++|+|+|++||+|+|+++|. .+ ...|.+.+...++.+.+.. ++.. ...|.||+ +
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~-~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt 121 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINT-NK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGY 121 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEEC-CT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcC-CC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceE
Confidence 4444555666776 68999999999999999997 32 3366666665444433211 0000 12789999 9
Q ss_pred EEEEEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.+|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 122 ~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 122 TDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999999 99999999999999999999999984
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-12 Score=138.20 Aligned_cols=231 Identities=12% Similarity=0.053 Sum_probs=153.2
Q ss_pred EEEEEEEEEEEeCC-------------CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee--cc---cc
Q 008038 32 RHYKWEVEYMFWSP-------------DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW--HG---IR 93 (580)
Q Consensus 32 ~~~~l~~~~~~~~~-------------~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~--HG---~~ 93 (580)
+++.|.++.-.... .|.....++|||+. .|+|+|++| ++++|+.|........+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776554332 12234588999985 699999999 9999999996667889999 77 44
Q ss_pred ccCCCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcceeeecCcchhhcc------------c-cEEEE--EEEcCC
Q 008038 94 QLGTPWADGTA-----SISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSA------------G-LYGSL--IVDVAD 153 (580)
Q Consensus 94 ~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~------------G-l~G~l--iV~~~~ 153 (580)
... ...||.+ .+....|.|||+++..+++. .+.||..++....... + ....+ .+....
T Consensus 216 ~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (448)
T 3aw5_A 216 MRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKG 293 (448)
T ss_dssp EEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEEC
T ss_pred EEE-EEeCCCccCCceEeceEEECCcceEEEEEECC-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCC
Confidence 332 4678864 23456789999999999987 4788988873221000 0 11112 221111
Q ss_pred CCCCCCCC----------CcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCccccc
Q 008038 154 GEKEPFHY----------DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCK 223 (580)
Q Consensus 154 ~~~~p~~~----------d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~ 223 (580)
....|... ..+..+.+. .....|+|||+.+..
T Consensus 294 ~~~~p~~L~~lp~~~~~~~~~~~~~l~----------------------~~~~~~~iNg~~~~~---------------- 335 (448)
T 3aw5_A 294 EAVPVEALSDPPPEPPKPTRTRRFALS----------------------LSGMQWTINGMFWNA---------------- 335 (448)
T ss_dssp CCCCCCCCSCCCCCCCCCSEEEEEEEE----------------------EETTEEEETTBCCCT----------------
T ss_pred CCCCccccCCCCCCCCCCCceEEEEEe----------------------CCCceeeECCCcCCC----------------
Confidence 10001000 000011110 011248899998751
Q ss_pred ccCCCCCCceEEE-EecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc------------Cc---eeeeeEEEcC
Q 008038 224 LRGNEQCAPQILH-VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV------------QP---FEVDDMDIYS 287 (580)
Q Consensus 224 ~~~~~~~~~~~~~-v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v------------~P---~~~d~v~l~p 287 (580)
..+.+. ++.|++++|+|.|.+....|.||||||.|+|++.+|... .| ...|++.|.|
T Consensus 336 -------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~p 408 (448)
T 3aw5_A 336 -------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWP 408 (448)
T ss_dssp -------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECT
T ss_pred -------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCC
Confidence 112355 889999999999987345799999999999999999764 23 5789999999
Q ss_pred CceEEEEEEeC---CCCCcceEEEEeecC
Q 008038 288 GESYSVLLTTN---QDPSYNYWISAGVRG 313 (580)
Q Consensus 288 GeR~dv~v~~~---~~~~g~y~l~~~~~~ 313 (580)
|+++.+.+++. .+.+ |.+|||...
T Consensus 409 g~~~~i~vrF~~~~adnp--w~~HCHil~ 435 (448)
T 3aw5_A 409 GETVKIVVNFDAKKRGQL--FPFHCHNLE 435 (448)
T ss_dssp TCEEEEEEEECGGGTTCE--EEEEESSHH
T ss_pred CCEEEEEEEecccCCCCc--EEEEcCChH
Confidence 99999997775 4334 999999743
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-11 Score=134.15 Aligned_cols=251 Identities=10% Similarity=0.057 Sum_probs=151.1
Q ss_pred eEEEEEcCCCC--------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 50 SIVMGINGQFP--------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 50 ~~~~~~NG~~p--------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
...++|||+.. -|+|+|++|+++++||.|........+|++|..+.. ...||.+ .+....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999863 379999999999999999966667899999976543 4678876 2345779999999
Q ss_pred EEEEEcC-CCcceeeecCc--chh---hccccEEEEEEEcCCCCCCCCCC-----C----cceEE-EEeecccCch----
Q 008038 118 LYRFKVD-KAGTYFYHGHL--GMQ---RSAGLYGSLIVDVADGEKEPFHY-----D----GEFNL-LLSDWWHRSV---- 177 (580)
Q Consensus 118 ~y~f~~~-~~Gt~wYH~H~--~~~---~~~Gl~G~liV~~~~~~~~p~~~-----d----~e~~l-~~~d~~~~~~---- 177 (580)
+..+++. .+|.||..... ... .......+++.........|... + .+..+ .+........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999994 47899988765 211 11111123333322111111110 0 00000 0000000000
Q ss_pred -HHHHhhhcCCCCCCCCCCceEEeCccCCCCc---cc-cccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCC
Q 008038 178 -HEQEVGLSSRPLRWIGEPQTLLINGRGQFNC---SL-AAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA 252 (580)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~ 252 (580)
......+.... . ......++|||+.+... ++ ...+. +. ..-......+.++.++.+++-++|...
T Consensus 354 ~~~~~~~~~~~~-~-~~~~~~~~iNg~s~~~~~~~P~L~~~~~-g~-------~~~~~~~~~~~~~~~~~v~~~vi~n~~ 423 (559)
T 2q9o_A 354 RPDNTLPVALDL-T-GTPLFVWKVNGSDINVDWGKPIIDYILT-GN-------TSYPVSDNIVQVDAVDQWTYWLIENDP 423 (559)
T ss_dssp CGGGEEEEEEEC-S-SSSSCEEEETTBCCCCCTTSCHHHHHHH-TC-------CCCCGGGCEEEECCSSCEEEEEEEECT
T ss_pred ceeEEEEEEeec-C-CCceEEEEECCEecccCCCCCcHhHhhc-CC-------ccCCCCceEEEcCCCCEEEEEEEeCCC
Confidence 00000000000 0 11234688999987411 10 00000 00 000011236888887778777776643
Q ss_pred ----ceeEEEEEeCeeeEEEEECC---------ccc------------CceeeeeEEEcCCceEEEEEEeCCCCCcceEE
Q 008038 253 ----LASLNLAVKNHKMVVVEADG---------NYV------------QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 307 (580)
Q Consensus 253 ----~~~~~~~i~gh~~~via~DG---------~~v------------~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l 307 (580)
...|.||||||.|+|++.++ ... .|...|+|.|.+|+.+.+.++++. +|.|.+
T Consensus 424 ~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN--PG~W~~ 501 (559)
T 2q9o_A 424 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN--PGAWLF 501 (559)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS--CEEEEE
T ss_pred ccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC--CeeEEE
Confidence 45799999999999999987 321 467899999999999999999887 899999
Q ss_pred EEeecC
Q 008038 308 SAGVRG 313 (580)
Q Consensus 308 ~~~~~~ 313 (580)
|||...
T Consensus 502 HCHil~ 507 (559)
T 2q9o_A 502 HCHIAW 507 (559)
T ss_dssp EECCHH
T ss_pred Eecchh
Confidence 999754
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.41 E-value=7.8e-13 Score=113.02 Aligned_cols=105 Identities=23% Similarity=0.175 Sum_probs=78.7
Q ss_pred EEEEEEEEEEEe-----CCCCceeEE-EEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 32 RHYKWEVEYMFW-----SPDCKESIV-MGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 32 ~~~~l~~~~~~~-----~~~g~~~~~-~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
++|++.+..... ..++..... ..+|+++++|.|++++||+|+++++|. ... +||+.... .|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~-d~~-----~H~~~i~~----~~~-- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK-SPI-----SEGFSIDA----FGV-- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEEC-SSS-----CEEEEEGG----GTE--
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEEC-CCC-----eEEEEEcC----CCc--
Confidence 345666655433 234555555 489999999999999999999999999 444 56655431 122
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+..+.||++++|.|+++++|+||||||....... |.|.|+|++
T Consensus 70 --~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 --QEVIKAGETKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp --EEEECTTCEEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred --eeEeCCCCEEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 5679999999999999999999999986554333 999999974
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=132.96 Aligned_cols=99 Identities=25% Similarity=0.441 Sum_probs=82.6
Q ss_pred EEEcCCC--CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC---C-----CCccccCCCCCeEEEEEE
Q 008038 53 MGINGQF--PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT---A-----SISQCPINPGETYLYRFK 122 (580)
Q Consensus 53 ~~~NG~~--pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~---~-----~~~q~~i~pG~~~~y~f~ 122 (580)
|+|||+. ..|.|++++||+|+|++.|. ....+++|+||..+.. ..+|. | ......|.||++++|.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~-g~~~HpfHlHGh~f~v--~~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITH-GEYYHTFHMHGHRWAD--NRTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEE-SSCCEEEEETTCCEES--SSSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcC-CccccccEecCcEEEE--eccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 6899986 36899999999999999999 6789999999987542 12332 1 123467999999999999
Q ss_pred c---CCCcceeeecCcchhhccccEEEEEEEcCCC
Q 008038 123 V---DKAGTYFYHGHLGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 123 ~---~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 154 (580)
+ +.+|+|+||||...+...||.|.|+|.+++.
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 6 7899999999999999999999999998654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.1e-12 Score=135.04 Aligned_cols=262 Identities=15% Similarity=0.050 Sum_probs=157.4
Q ss_pred EEEEEEEEEEEeCCCC-----------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeecc-------cc
Q 008038 32 RHYKWEVEYMFWSPDC-----------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHG-------IR 93 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG-------~~ 93 (580)
.++.|.++......+| .....+++||+ +.|.|.|++| ++++||.|........++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 3456666665444333 23558999998 4799999985 999999999666678899976 22
Q ss_pred ccCCCCCCCCC-----CCccccCCCCCeEEEEEEcCC-Cc-ceeeecCcchhhc-------cccEEEEEEEcCCCCCCCC
Q 008038 94 QLGTPWADGTA-----SISQCPINPGETYLYRFKVDK-AG-TYFYHGHLGMQRS-------AGLYGSLIVDVADGEKEPF 159 (580)
Q Consensus 94 ~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~-~G-t~wYH~H~~~~~~-------~Gl~G~liV~~~~~~~~p~ 159 (580)
+. -...||.. .+....|.|||+++..+++.+ +| +||.......... ....+.+-+........+.
T Consensus 250 ~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22 14678852 235678999999999999944 67 5877653210000 0011222222211100000
Q ss_pred CCCcceEEEEeeccc-CchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEe
Q 008038 160 HYDGEFNLLLSDWWH-RSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238 (580)
Q Consensus 160 ~~d~e~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (580)
....+..+..... ......... ..+......|+|||+.+.. ...+..+.++
T Consensus 329 --~~~~P~~L~~~~~p~~~~~~~~~-----~~~~~~~~~w~iNG~~f~~---------------------~~~p~l~~v~ 380 (534)
T 3abg_A 329 --TSVVPANLRDVPFPSPTTNTPRQ-----FRFGRTGPTWTINGVAFAD---------------------VQNRLLANVP 380 (534)
T ss_dssp --CCCCCCCCCCCSCCCCCCCCCEE-----EECSCCCSTTCCCCBTTBC---------------------TTSCCCCEEC
T ss_pred --CCCCccccccCCCCCCccccceE-----EEEeccCceeEECCcccCC---------------------CCCcceeecc
Confidence 0000000000000 000000000 0001122357899987651 0112246789
Q ss_pred cCCEEEEEEeecCCceeEEEEEeCeeeEEEEE-CCc---ccCc---eeeeeEEEcCCceEEEEEE-eCCCCCcceEEEEe
Q 008038 239 PNKTYRLRIASTTALASLNLAVKNHKMVVVEA-DGN---YVQP---FEVDDMDIYSGESYSVLLT-TNQDPSYNYWISAG 310 (580)
Q Consensus 239 ~Ge~~rlRliNag~~~~~~~~i~gh~~~via~-DG~---~v~P---~~~d~v~l~pGeR~dv~v~-~~~~~~g~y~l~~~ 310 (580)
.|++++|.|.|.+....|.||||||.|+|++. +|. ...+ ...|+|.|.||+++.|.+. ++. +|.|.+|||
T Consensus 381 ~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn--pG~w~~HCH 458 (534)
T 3abg_A 381 VGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF--PGVYMFHCH 458 (534)
T ss_dssp TTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC--CEEEEEEES
T ss_pred CCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC--CccEEEecC
Confidence 99999999999875557999999999999998 663 1112 4589999999999999998 555 899999999
Q ss_pred ecCCCCCCCCceEEEEec
Q 008038 311 VRGRKPATPPALTLLNYH 328 (580)
Q Consensus 311 ~~~~~~~~~~~~ail~y~ 328 (580)
..... .....+.+.+.
T Consensus 459 il~H~--d~GMm~~~~V~ 474 (534)
T 3abg_A 459 NLIHE--DHDMMAAFNAT 474 (534)
T ss_dssp CHHHH--HTTCEEEEEEC
T ss_pred hHHHH--hcCCceEEEEE
Confidence 75432 12334556665
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5e-12 Score=136.37 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=74.9
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCC
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK 125 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~ 125 (580)
+++...+|++|+++++|+|++++||+|+++++|. ....-. +||+.... .|+ ...|.||++++|.|++.+
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~-d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNL-DEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEEC-CCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeC-CCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678889999999999999999999999999997 332111 35554432 222 367999999999999999
Q ss_pred CcceeeecCc---chhhccccEEEEEEEcCC
Q 008038 126 AGTYFYHGHL---GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 126 ~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~ 153 (580)
+|+||||||. ..| .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 9999999992 234 3999999999753
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.8e-11 Score=130.98 Aligned_cols=231 Identities=13% Similarity=0.084 Sum_probs=145.8
Q ss_pred eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccc-cccCCCCCCCCC-----CCccccCCCCCeEEEEEEc
Q 008038 50 SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGI-RQLGTPWADGTA-----SISQCPINPGETYLYRFKV 123 (580)
Q Consensus 50 ~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~-~~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f~~ 123 (580)
...++|||+. .|.|.++.| ++++|+.|........+|+.|. .+.. ...||.. .+....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4578999985 799999986 9999999996666788999886 4332 4679843 2356788999999999999
Q ss_pred CC-Ccceeee-cCcc--hhhcccc-EEEEEEEcCC--C----CCCC--CCC-C--------cceEEEEeecccCchHHHH
Q 008038 124 DK-AGTYFYH-GHLG--MQRSAGL-YGSLIVDVAD--G----EKEP--FHY-D--------GEFNLLLSDWWHRSVHEQE 181 (580)
Q Consensus 124 ~~-~Gt~wYH-~H~~--~~~~~Gl-~G~liV~~~~--~----~~~p--~~~-d--------~e~~l~~~d~~~~~~~~~~ 181 (580)
.+ +|.++.- .-.. .....+. ...+-+.... . ...| +.. + .+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 44 6763321 1111 0000001 1222222211 0 0011 000 0 0011111100
Q ss_pred hhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEe
Q 008038 182 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVK 261 (580)
Q Consensus 182 ~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~ 261 (580)
.. ......++|||+.+.+ +..+.++.|++++|+|+|.+.. .|.||||
T Consensus 378 -------~~-~~g~~~~~iNg~~~~~------------------------~~~~~~~~g~~~~w~l~N~~~~-~HP~HlH 424 (513)
T 2wsd_A 378 -------QD-EYGRPVLLLNNKRWHD------------------------PVTETPKVGTTEIWSIINPTRG-THPIHLH 424 (513)
T ss_dssp -------EC-TTSCEEEEETTBCTTS------------------------CCCBCCBTTCEEEEEEEECSSS-CEEEEES
T ss_pred -------cC-CCCCceEeECCccCCC------------------------cccEecCCCCEEEEEEEcCCCC-CcCEeEe
Confidence 00 0012356799987641 1246788999999999998744 7999999
Q ss_pred CeeeEEEEECCcc----------------c-----CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCCCCC
Q 008038 262 NHKMVVVEADGNY----------------V-----QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPP 320 (580)
Q Consensus 262 gh~~~via~DG~~----------------v-----~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~~~~ 320 (580)
||.|+|++.++.. . ++...|++.|.||+++.|.++++. .+|.|.+|||..... ...
T Consensus 425 G~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~d-npG~w~~HCHil~H~--~~G 501 (513)
T 2wsd_A 425 LVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGP-YSGRYVWHCHALEHE--DYD 501 (513)
T ss_dssp SCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCS-CCEEEEEEESCHHHH--TTT
T ss_pred CceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecC-CCCCEEEEcCChhhh--hcC
Confidence 9999999987621 0 234789999999999999999952 489999999975432 233
Q ss_pred ceEEEEec
Q 008038 321 ALTLLNYH 328 (580)
Q Consensus 321 ~~ail~y~ 328 (580)
..+.+++.
T Consensus 502 Mm~~~~V~ 509 (513)
T 2wsd_A 502 MMRPMDIT 509 (513)
T ss_dssp CEEEEEEB
T ss_pred CceeEEEe
Confidence 44555554
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=99.21 E-value=9.8e-10 Score=119.54 Aligned_cols=249 Identities=11% Similarity=0.031 Sum_probs=149.3
Q ss_pred eEEEEEcCCCC----------------CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccc
Q 008038 50 SIVMGINGQFP----------------GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQC 109 (580)
Q Consensus 50 ~~~~~~NG~~p----------------gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~ 109 (580)
...++|||+.. .++|+|++|+++++|+.|........++++|..+.. ...||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 34688999732 379999999999999999966667799999977643 4678875 23456
Q ss_pred cCCCCCeEEEEEEc-CCCcceeeecCcchh----hccccEEEEEEEcCCCCCCCCCCCcceEEEEeecccCchHHHHhhh
Q 008038 110 PINPGETYLYRFKV-DKAGTYFYHGHLGMQ----RSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 184 (580)
Q Consensus 110 ~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~----~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~~~d~~~~~~~~~~~~~ 184 (580)
.|.|||+++..+++ +..|.||........ ...+..-+|+.........|.....+. .+-..+.....+...
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~----~~~~~~~~~~~L~P~ 379 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTP----RGTCEDEPVASLVPH 379 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCC----CCCSCCSCGGGCCBS
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCc----cchhhcccccccccC
Confidence 78999999999999 567999999874321 111122234443322111221110000 000000000000000
Q ss_pred cCC--CC--------CC-CCCCceEEeCccCCCC---ccc-cccccCCCcccccccCCCCCCceEEEEe----cCCEEEE
Q 008038 185 SSR--PL--------RW-IGEPQTLLINGRGQFN---CSL-AAHFSNGSAEQCKLRGNEQCAPQILHVQ----PNKTYRL 245 (580)
Q Consensus 185 ~~~--~~--------~~-~~~~~~~liNG~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~Ge~~rl 245 (580)
... +. .. ......+.|||..+.. -+. ..-+. + .-.+ ......+.+. .|++|.|
T Consensus 380 ~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~-g---~~~~----~~~~~~~~~~~~~~~~~~Vei 451 (580)
T 3sqr_A 380 LALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFN-N---ETIF----PTEYNVVALEQTNANEEWVVY 451 (580)
T ss_dssp SCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHT-T---CCCC----CGGGCEEEECC----CCEEEE
T ss_pred CCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhc-C---CccC----CCCcceeecccccCCCcEEEE
Confidence 000 00 00 0122357788887631 110 00000 0 0000 0011234443 5999999
Q ss_pred EEeecCC-ceeEEEEEeCeeeEEEEECCc------------ccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeec
Q 008038 246 RIASTTA-LASLNLAVKNHKMVVVEADGN------------YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 312 (580)
Q Consensus 246 RliNag~-~~~~~~~i~gh~~~via~DG~------------~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~ 312 (580)
-|-|.+. ...|.||+|||.|.|++.+.. ...|...|++.+.+|+.+.+.+++++ +|.|.+|||..
T Consensus 452 Vi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN--PG~W~~HCHi~ 529 (580)
T 3sqr_A 452 VIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN--PGSWLLHCHIA 529 (580)
T ss_dssp EEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS--CEEEEEEECSH
T ss_pred EEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC--CeeeEEEECcH
Confidence 9999861 247999999999999998432 22478899999999999999999987 89999999964
Q ss_pred C
Q 008038 313 G 313 (580)
Q Consensus 313 ~ 313 (580)
.
T Consensus 530 ~ 530 (580)
T 3sqr_A 530 W 530 (580)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-10 Score=96.87 Aligned_cols=79 Identities=23% Similarity=0.372 Sum_probs=62.0
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
+..|..+.|++++||+|++ +|. ...+|++|+++. .||.....+..|.||++++|.| .++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~-d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INR-EAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EEC-CCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 4456679999999999655 698 667899998852 2555444455689999999988 799999999985
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 32 899999984
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=98.36 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=65.3
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|+||+||..+... .+. +.. ....++..+.||+...++|.+
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~------~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLP------PHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEE--EECSSC------CEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEECT
T ss_pred EEEEcCCCEEEE--EECCCC------CCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEec
Confidence 488999999986 477656 89999999876431 000 000 012578899999999999998
Q ss_pred -cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 -DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|.|||| .|...||++.|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999764
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.05 E-value=9.5e-09 Score=114.01 Aligned_cols=79 Identities=5% Similarity=-0.003 Sum_probs=65.4
Q ss_pred EEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc---------------------------CceeeeeEEEc
Q 008038 234 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---------------------------QPFEVDDMDIY 286 (580)
Q Consensus 234 ~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~v~l~ 286 (580)
.+.++.|++++|.|+|.+.. .|.||||||.|+|++.+|... ++...|+|.|.
T Consensus 473 ~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~ 551 (612)
T 3gyr_A 473 GFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp CEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEEC
T ss_pred ceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEEC
Confidence 57899999999999998855 799999999999998876422 12247999999
Q ss_pred CCceEEEEEEeCCCCCcceEEEEeecCC
Q 008038 287 SGESYSVLLTTNQDPSYNYWISAGVRGR 314 (580)
Q Consensus 287 pGeR~dv~v~~~~~~~g~y~l~~~~~~~ 314 (580)
+|+.+.|.+++.. .+|.|.+|||....
T Consensus 552 ~~~~v~i~~rfad-npG~w~~HCHil~H 578 (612)
T 3gyr_A 552 GPQGLRVMGKFDG-AYGRFMYHCHLLEH 578 (612)
T ss_dssp SSEEEEEEEECCS-CCEEEEEEESSHHH
T ss_pred CCCEEEEEEEeCC-CCcceEEcCCChHH
Confidence 9999999999643 48999999997543
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.5e-10 Score=101.28 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=69.8
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEe-------ecC--CCCCcccccccCCCCCCccceEEeCCCc
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG-------RGE--GKFTKEDEKKFNLKNPPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~-------~~~--g~~~~~~~~~~~~~~p~~rDTv~vpp~g 518 (580)
+.++.|++|+|++.|.+.+ . .|.||+|+....+.. ... ..+.+.+ ....++|+..|.||+
T Consensus 37 i~v~~G~~V~~~~~N~~~~----~-~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 37 LTVSAGQTVTIRFKNNSAV----Q-QHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEECTTCEEEEEEECCCSS----C-CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTC
T ss_pred EEECCCCEEEEEEEeCCCC----C-CeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCC
Confidence 8899999999999997643 0 599999886532110 000 0111100 123578999999999
Q ss_pred EEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...|.|.+++||.|.||||+..|.+ ||++.|.|
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 9999999999999999999999999 99999876
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.1e-10 Score=93.84 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=63.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc-CCCcceeeecCc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV-DKAGTYFYHGHL 135 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~ 135 (580)
.+.|++++||+|++ +|. ...++++|+|+...+ ..+|.. ......+.||++++|.|++ .++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~-~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNN-KVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EEC-SSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EEC-CCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 47899999998755 588 567899998875432 112210 0123468999999999988 89999999999
Q ss_pred chhhccccEEEEEEEc
Q 008038 136 GMQRSAGLYGSLIVDV 151 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~~ 151 (580)
.|...||.|.|+|++
T Consensus 92 -~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 -PHRGAGMVGKITVAG 106 (106)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -ChhhcCcEEEEEEcC
Confidence 777889999999963
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-09 Score=95.97 Aligned_cols=91 Identities=20% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCC-ceeeeecccccc------------C--CCC-CCCCCC--CccccCCCCCeEEE
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTE-GVVIHWHGIRQL------------G--TPW-ADGTAS--ISQCPINPGETYLY 119 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~-~~siH~HG~~~~------------~--~~~-~DG~~~--~~q~~i~pG~~~~y 119 (580)
.|-.+.|+|++||+|+++++|. ... +++++.++.... + ..+ .++.+. -....|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~-~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNN-SAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECC-CSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeC-CCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 4445889999999999999999 666 899999874210 0 000 011110 01234899999999
Q ss_pred EEEcCCCcceeeecCcchhhccccEEEEEEE
Q 008038 120 RFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 120 ~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.|++.++|+|+||||...|.. ||.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999888888 999999984
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.87 E-value=7.5e-09 Score=86.11 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=64.9
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
|..|-...|++++||+|+++++|. ...++++...+... ...+.||++.++.|++.++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~-d~~~H~~~~~~~~~-------------~~~~~pg~~~~~~~t~~~~G~Y~y~C~- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNK-GKSEHTFTIKKLGI-------------DVVVESGKEKNITVKPKSAGTYELICR- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEEC-SSSCEEEEEGGGTE-------------EEEECTTCEEEEEECCCSCEEEEEECT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcC-CCceEEEEEecCCc-------------ceeecCCcceeEEEecccCceEEEECc-
Confidence 444545689999999999999999 66677777766533 235789999999999999999999996
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
.+...||.|.|+|+
T Consensus 87 -~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 -YHLLKGMEGKVIVK 100 (100)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -cccCCCCEEEEEEC
Confidence 46678999999995
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.80 E-value=9.7e-09 Score=86.36 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=62.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+|+ |.+.. .|+||+|+..+.. . .| . +... ...|++.+.||+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~--~-~g-~---~~~~------~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA--K-SA-D---LAKS------LSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CCCBEECSSSSTT--C-CH-H---HHHH------HCBCSCCCSTTCEEEEECCT
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEEeCCCCcc--c-cc-c---cchh------ccccceeeCCCCEEEEEEec
Confidence 3889999999886 76655 8999999865411 0 00 0 0000 11467789999999999888
Q ss_pred -cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 -DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|.|||| .|.+.||.+.|.|.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999999764
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=8.3e-09 Score=85.47 Aligned_cols=78 Identities=27% Similarity=0.372 Sum_probs=59.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcCCCcceeeecCcc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVDKAGTYFYHGHLG 136 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~ 136 (580)
.+.|++++||+|+ ++|. ...++++|+|+...+ +|.. ......+.||+++++.|. ++|+|+|||+
T Consensus 17 P~~i~v~~G~~V~--~~n~-~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNN-AGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC--CCeEEEEEcC--
Confidence 4789999999875 5888 667899999986432 1211 001246899999999874 8999999999
Q ss_pred hhhccccEEEEEEE
Q 008038 137 MQRSAGLYGSLIVD 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 67778999999984
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.77 E-value=4.8e-08 Score=86.57 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=68.2
Q ss_pred CCCCCeEEecCCCEEEEEEEe--CCCCCceeeeecccc------------cc----CCCCCCCCCCC-ccccCCCCCeEE
Q 008038 58 QFPGPTIRARAGDTIAVELTN--KLYTEGVVIHWHGIR------------QL----GTPWADGTASI-SQCPINPGETYL 118 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N--~l~~~~~siH~HG~~------------~~----~~~~~DG~~~~-~q~~i~pG~~~~ 118 (580)
+|-.+.|+|++||+|+++++| . ...+|+++++... .. .-+..|....+ ....|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 344579999999999999999 6 5678888887310 00 00000110000 113589999999
Q ss_pred EEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 119 YRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 119 y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+.|++.++|+|||||+...+...||.|.|+|.|
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 999999999999999988888899999999974
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.69 E-value=4.2e-08 Score=81.14 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=58.4
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|++++||+|++ +|. ...+++++.++...++ ...++.. .....+.||+++++.| .++|+|+|||+ .|..
T Consensus 18 P~~i~v~~G~~V~~--~n~-~~~~H~~~~~~~~~pg-~~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNN-KLSPHNIVFDADGVPA-DTAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EEC-SSCCEEEEECCSSSCH-HHHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EEC-CCCCcEEEEeCCCCCc-ccccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 47899999998765 587 5678999988753210 0000000 0134689999999988 78999999999 6777
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.68 E-value=3.8e-08 Score=80.17 Aligned_cols=75 Identities=29% Similarity=0.452 Sum_probs=57.4
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhh
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR 139 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~ 139 (580)
-.+.|++++||+|++ +|. ...+++++.++... +. .....+.||+++++.| .++|+|||||+ .+.
T Consensus 17 ~P~~i~v~~Gd~V~~--~n~-~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 17 EPSTIEIQAGDTVQW--VNN-KLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHR 80 (91)
T ss_dssp ESSEEEECTTCEEEE--EEC-SSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTG
T ss_pred eCCEEEECCCCEEEE--EEC-CCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCc
Confidence 347899999999765 577 56789999887311 00 1134689999988887 78999999999 566
Q ss_pred ccccEEEEEEE
Q 008038 140 SAGLYGSLIVD 150 (580)
Q Consensus 140 ~~Gl~G~liV~ 150 (580)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 67999999984
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.66 E-value=4.6e-08 Score=86.66 Aligned_cols=95 Identities=22% Similarity=0.288 Sum_probs=69.9
Q ss_pred EEccCCcEEEEEEEc--CCCCCCCCCCCCCeeecCC--CeEEEe-ec-----CCCCCcccccccCCCCCCccceEEeCCC
Q 008038 448 YMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGH--DFWVLG-RG-----EGKFTKEDEKKFNLKNPPLKNTAVIFPY 517 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N--~~~~~~~~~~~HP~HlHG~--~F~vv~-~~-----~g~~~~~~~~~~~~~~p~~rDTv~vpp~ 517 (580)
+.++.|+.|+|++.| .+.+ .|.||++.. ++.-+. .+ ...|-+.. -....+++|..|.||
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----DTPNALAWTAMLNAG 103 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----TCTTEEEECCCBCTT
T ss_pred EEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCcc-----ccccccccceeeCCC
Confidence 889999999999999 5555 899999853 221100 00 00010000 001256789999999
Q ss_pred cEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 518 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 518 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
....+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 104 ~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999999775
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5e-08 Score=80.50 Aligned_cols=78 Identities=22% Similarity=0.381 Sum_probs=58.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC--CccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS--ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
.+.|++++||+| +++|. ...+++++.++.... +|..+ .....+.||+++++.| .++|+|+|||+ .|
T Consensus 18 P~~i~v~~G~~V--~~~n~-~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMN-KVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEEC-SSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEEC-CCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Ch
Confidence 368999999985 55687 556888888865321 12110 0124589999999887 79999999999 67
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 778999999984
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.61 E-value=9.3e-08 Score=79.69 Aligned_cols=80 Identities=20% Similarity=0.212 Sum_probs=57.2
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC-----CCCCCCC--ccccCCCCCeEEEEEEcCCCcceeeec
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW-----ADGTASI--SQCPINPGETYLYRFKVDKAGTYFYHG 133 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~-----~DG~~~~--~q~~i~pG~~~~y~f~~~~~Gt~wYH~ 133 (580)
.+.|++++||+|+ ++|. ...+++++++.-. ... ++..+++ ....+.||+++++.| .++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLV-GETGHNIVFDIPA---GAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEEC-SSSCBCCEECCCT---TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEEC-CCCCeEEEEeCcc---cccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEe
Confidence 4789999999976 5588 5667888877310 000 0000111 234589999999988 7999999999
Q ss_pred CcchhhccccEEEEEEE
Q 008038 134 HLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 134 H~~~~~~~Gl~G~liV~ 150 (580)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77778999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.1e-07 Score=80.05 Aligned_cols=76 Identities=21% Similarity=0.209 Sum_probs=54.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|+|++||+|++.++|. +|++..+.- ..-+|.. ...+.||++++|.| +++|+|||+|- .|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~----~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~ 83 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK----SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV--TEPGLYGVKCT--PHFG 83 (123)
T ss_dssp SSEEEECTTEEEEEEESST----TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 3689999999977766653 344444321 1123321 23467999999888 78999999998 6777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 84 ~GM~G~I~V~~~ 95 (123)
T 3erx_A 84 MGMVGLVQVGDA 95 (123)
T ss_dssp TTCEEEEEESSS
T ss_pred CCcEEEEEECCC
Confidence 899999999864
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.59 E-value=4.3e-08 Score=81.08 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=59.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+ |.+.. .|.+|+|+..+- +. +... ...|+..+.||+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 3889999999986 65555 899999875321 10 0000 115788999999888766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.|.|
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 89999999999 7999999999876
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1.7e-07 Score=77.58 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=58.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC------CCccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA------SISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~------~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
.+.|++++||+| +++|. ...+++++.++... .+|.. ......+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~-~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNN-AGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEEC-SSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEEC-CCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC
Confidence 368999999985 55888 56788888887432 12211 011235789999999884 8999999999
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 67778999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1.8e-07 Score=77.42 Aligned_cols=78 Identities=19% Similarity=0.242 Sum_probs=57.5
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----C--CccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----S--ISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
.+.|++++||+|+ ++|. ...+++++.++...+ +|.. + .....+.||+++++.| .++|+|+|+|+
T Consensus 16 P~~i~v~~G~tV~--~~n~-~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNN-AGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEEC-SSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEEC-CCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE--CCCceEEEEcC
Confidence 4789999999765 5888 566888888764221 2211 0 0123579999999887 49999999999
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 67778999999984
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.55 E-value=3.1e-07 Score=79.40 Aligned_cols=77 Identities=22% Similarity=0.308 Sum_probs=53.9
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|++.++|. +|++..+.-. .-||.. ...+.||++++|.| +++|+|||||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----GHNSALMKGG-----APEGAE---TWKGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 4799999999966554442 4444433211 112321 23457999988888 78999999998 4677
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
.||.|.|+|.+++
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999999754
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.8e-07 Score=77.30 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=59.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.||+|+..+ ...++. . ..++|+..+.||+...+.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~------p~~~~~---~------~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGF------PHNIVFDEDAI------PSGVNA---D------AISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECSSC------CEEEEECGGGS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCC------CCcccc---c------cccccceecCCCCEEEEEe--
Confidence 388999999988 576665 89999997522 111110 0 0246889999999888765
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.+.|
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 59999999999 7999999999876
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=5e-07 Score=77.56 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=55.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|+|++||+| +++|. . .+|++..+.... -+|. ....+.||+++++.| +++|+|||||- .|..
T Consensus 21 P~~i~V~~GDTV--~f~n~-~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~ 84 (124)
T 3ef4_A 21 PGFVKVEAGDTV--KFVPT-D-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA--EKEGLYVLKCA--PHYG 84 (124)
T ss_dssp SSEEEECTTCEE--EEECS-S-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC--CSSEEEEEECT--TTGG
T ss_pred CCEEEECCCCEE--EEEEC-C-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe--CCCeEEEEEcC--CCCc
Confidence 378999999996 45566 3 567776653211 1232 123567999988888 68999999995 6777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 85 ~GM~G~I~V~~p 96 (124)
T 3ef4_A 85 MGMVVLVQVGKP 96 (124)
T ss_dssp GTCEEEEEESSC
T ss_pred CCCEEEEEECCC
Confidence 899999999874
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.3e-07 Score=77.90 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=57.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|+ |.+.. .|.+++++..+. .+ ... ...++..+.||+...+.| +
T Consensus 21 i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~------~~~------~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 21 LSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ES------APA------LSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp EEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SC------HHH------HCBCCCCCSCSCCEEEEC--C
T ss_pred EEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----cc------ccc------ccccceecCCCCEEEEEe--C
Confidence 889999999886 65555 799999876540 00 000 114677788998887766 8
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|.|||+ .|.++||.+.+.|
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEE
Confidence 9999999999 9999999999876
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.42 E-value=5.8e-07 Score=72.99 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=56.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|.|. |.+.. .|.+|+|+.. . ...++..+.||+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLA------PHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--
Confidence 3889999999886 65545 7999998720 0 114677889999877766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||| .|.+.||.+.+.|
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 89999999999 8999999998865
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.1e-06 Score=76.73 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=56.4
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
+..|-.+.|++++||+|++ +|. ...+|++++.... +|........+.||++++|.| .++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~-d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EEC-CCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 3445458999999999765 588 5567777765321 122222233588999999988 689999999964
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 22 999999984
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.33 E-value=9.9e-07 Score=72.91 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=59.1
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.+|+++..|. ..++.. .. ...+|++.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p------~g~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGF------PHNDLFDKKEVP------AGVDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECSSC------CBCCEECTTSSC------TTCCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECCCC------cceEEEeCCCCc------cccccc-cc------cccccceeeCCCCEEEEEe--
Confidence 378999999888 576665 899999986441 111100 00 0125667889999887766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.+.||.+.+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 69999999999 8999999999876
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.33 E-value=4.3e-06 Score=72.42 Aligned_cols=92 Identities=18% Similarity=0.139 Sum_probs=62.0
Q ss_pred CCCCCeEEecCC-CEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCC----CCCCC--ccccCCCCCe
Q 008038 58 QFPGPTIRARAG-DTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWAD----GTASI--SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v~~G-d~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~D----G~~~~--~q~~i~pG~~ 116 (580)
+|--..|.|++| |+|+|+|+|. ...+ |++-+- |... ..-..++ +.+.+ ....|.||++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~-g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet 92 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHK-GHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEEC-SSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred eEccCeEEEcCCCeEEEEEEEEC-CCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCE
Confidence 344468999999 9999999998 5443 544332 2110 0000011 11110 1134799999
Q ss_pred EEEEEEcC---CCcceeeecCcchhhccccEEEEEEEc
Q 008038 117 YLYRFKVD---KAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 117 ~~y~f~~~---~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
.++.|++. ++|+|||.|-...|.. ||.|.|+|.+
T Consensus 93 ~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 93 TSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 99999986 9999999998777777 8999999973
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.29 E-value=2.3e-06 Score=72.52 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=57.2
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.+.|.+.. .|-|++... .-+..+.||+...+.|.++
T Consensus 40 i~v~~G~~V~~~~~n~d~~------~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 40 LVVKKGDAVKVVVENKSPI------SEGFSIDAF---------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp EEEETTCEEEEEEEECSSS------CEEEEEGGG---------------------------TEEEEECTTCEEEEEEECC
T ss_pred EEEeCCCEEEEEEEECCCC------eEEEEEcCC---------------------------CceeEeCCCCEEEEEEECC
Confidence 8899999999999998743 455444321 0256789999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
.||.|.||||+..|... |.+.+.+.
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEe
Confidence 99999999999887654 88888653
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.28 E-value=2.9e-06 Score=70.00 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=56.3
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC----CccccCCCCCeEEEEEEcCCCcceeeecC
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS----ISQCPINPGETYLYRFKVDKAGTYFYHGH 134 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~----~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H 134 (580)
|-.+.|++++||+|++ +|. ...++++....-. +-+|... .....+.||+++++.| .++|+|+|+|-
T Consensus 15 F~P~~i~v~~GdtV~~--~n~-~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNN-AGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EEC-SSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EEC-CCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEch
Confidence 3347899999999655 588 5567877766421 1122210 0013589999998888 79999999997
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
. |...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 4 6667999999984
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.5e-06 Score=73.36 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=52.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|+ ++|. .. +|++..+- ...-||.. .....||++++|.| .++|+|||+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~~~-~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPV-DK-GHNVESIK-----DMIPEGAE---KFKSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEES-SS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEEC-CC-CeEEEEec-----ccCCCCcc---ceecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 4789999999965 5565 22 45444431 01112321 12356899888777 68999999997 4777
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999874
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.24 E-value=6.5e-06 Score=74.23 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=62.0
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeee--cccccc------CCCCCC----CCCCC--ccccCCCCCeE
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHW--HGIRQL------GTPWAD----GTASI--SQCPINPGETY 117 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~--HG~~~~------~~~~~D----G~~~~--~q~~i~pG~~~ 117 (580)
+|--..|.| ++||+|+|+|+|. ...+ |++-+ +|.... ....++ +-+.+ ....|.||+++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~ 132 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHT-GTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEES 132 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEEC-SCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecceEEEecCCCEEEEEEEEC-CCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEE
Confidence 454468999 9999999999999 5543 44433 221000 000001 00100 11357999999
Q ss_pred EEEEEcC--CCcceeeecCcchhhccccEEEEEEEc
Q 008038 118 LYRFKVD--KAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 118 ~y~f~~~--~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
++.|++. ++|+|||+|-...|.. ||.|.|+|.+
T Consensus 133 svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 133 SLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999986 8999999998777777 8999999973
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.22 E-value=3.6e-06 Score=69.67 Aligned_cols=70 Identities=14% Similarity=0.270 Sum_probs=57.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|++.|.+.. .|.|.+.+..+ ...+.||....+.|+++
T Consensus 30 i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 30 ITIPINESTTLLLKNKGKS------EHTFTIKKLGI---------------------------DVVVESGKEKNITVKPK 76 (100)
T ss_dssp EEECTTSCEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEECCC
T ss_pred EEECCCCEEEEEEEcCCCc------eEEEEEecCCc---------------------------ceeecCCcceeEEEecc
Confidence 8999999999999998755 67665543221 23567889999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.||.|.|+|. .|...||.+.+.|
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cCceEEEECc--cccCCCCEEEEEE
Confidence 9999999996 6999999998865
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-06 Score=73.00 Aligned_cols=77 Identities=19% Similarity=0.282 Sum_probs=53.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+| +++|. .. +|++..+. ...-||.. ...+.||+++++.| .++|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV--~f~n~-~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSI--KFLPT-DK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEE--EEECS-SS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEE--EEEEC-CC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 478999999995 45666 22 44444431 01123321 12457999988877 68999999997 4677
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
.||.|.|+|.+++
T Consensus 84 ~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 84 MGMVALVVVGDKR 96 (123)
T ss_dssp TTCEEEEEESSCC
T ss_pred cCCEEEEEEcCCC
Confidence 8999999998643
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=72.77 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=57.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCc-cceEEeCCCcEEEEEEE
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL-KNTAVIFPYGWTALRFV 525 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ 525 (580)
.+.++.|++|+|+ |.+.. .|.++++.-... .+.+.. ... .+.+ .+++.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~~--n~~~~------~H~~~~~~~~~~-----~~~~~~--~~~----~~~~~~~~~~~~pG~~~~~tf- 77 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGET------GHNIVFDIPAGA-----PGTVAS--ELK----AASMDENDLLSEDEPSFKAKV- 77 (102)
T ss_dssp EEEECTTCCEEEE--ECSSS------CBCCEECCCTTC-----CHHHHH--HHH----HTSCCTTCCBBTTBCEEEECC-
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCcccc-----cccccc--hhh----cccccccceecCCCCEEEEEe-
Confidence 3889999999986 76655 799998831110 000000 000 0122 4677889999887766
Q ss_pred ecCceeeEEeeecchhhhcccEEEEec
Q 008038 526 ADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 526 adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.+.||.+.+.|
T Consensus 78 -~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 -STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp -CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred -CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999999876
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=98.09 E-value=1.9e-05 Score=68.37 Aligned_cols=91 Identities=20% Similarity=0.194 Sum_probs=60.6
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCC----CCCC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWAD----GTAS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~D----G~~~-~-~q~~i~pG~~ 116 (580)
+|--..|.| ++||+|+|+|+|. ...+ |++-+- |... ..-+.+| +-+. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHV-GKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEEC-CCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCE
Confidence 344468999 9999999999999 5553 554432 2100 0000111 1111 0 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.+..|++. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 93 DSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999996 7766 999998777777 899999996
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-05 Score=67.03 Aligned_cols=77 Identities=19% Similarity=0.304 Sum_probs=53.0
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcch
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGM 137 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~ 137 (580)
.|-...|+|++||+|++ +|. ...+|++...... .|........+.||+++++.| .++|+|+|+|-.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~-d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~-- 95 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNG-EVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP-- 95 (106)
T ss_dssp EESSSEEEECTTCEEEE--EEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS--
T ss_pred EEeCCEEEECCCCEEEE--EEC-CCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC--
Confidence 44457999999999765 488 4556666554321 111111122578999999888 689999999975
Q ss_pred hhccccEEEEEEE
Q 008038 138 QRSAGLYGSLIVD 150 (580)
Q Consensus 138 ~~~~Gl~G~liV~ 150 (580)
|. ||.|.|+|+
T Consensus 96 H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 HP--FMRGKVIVE 106 (106)
T ss_dssp CT--TCEEEEEEC
T ss_pred CC--CCEEEEEEC
Confidence 32 899999984
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1.7e-05 Score=83.92 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=64.4
Q ss_pred EEEEcCCCCCCeEEecCCCEEEEEEEeCC--CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcce
Q 008038 52 VMGINGQFPGPTIRARAGDTIAVELTNKL--YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTY 129 (580)
Q Consensus 52 ~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l--~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~ 129 (580)
+...+-.|-.+.|+|++||+|++.++|.. .+..|++...++.. ...+.||++.++.|++.++|+|
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFtadkPGvY 614 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVADKPGLH 614 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEcCCCEEE
Confidence 44455566668999999999999999962 13444444333211 3468899999999999999999
Q ss_pred eeecCcc-hhhccccEEEEEEEcC
Q 008038 130 FYHGHLG-MQRSAGLYGSLIVDVA 152 (580)
Q Consensus 130 wYH~H~~-~~~~~Gl~G~liV~~~ 152 (580)
||+|..- ...-.+|.|.|+|+|+
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 9999832 2222579999999974
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=98.05 E-value=2.4e-05 Score=67.53 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=61.6
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeecccc---------ccCCCCCC----CCCC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWHGIR---------QLGTPWAD----GTAS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~HG~~---------~~~~~~~D----G~~~-~-~q~~i~pG~~ 116 (580)
+|-...|.| +.|++|+|+++|. ...+ |++-+-... +..-..+| +-+. + ....|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHT-GKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 444468999 9999999999999 5554 655432110 00000111 1111 0 1124799999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+++.|.+. ++|+ |+|.|-...|.. ||.|.|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999997 8995 999998777777 899999996
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2.3e-05 Score=67.70 Aligned_cols=91 Identities=22% Similarity=0.151 Sum_probs=61.2
Q ss_pred CCCCCeEEe-cCCCEEEEEEEeCCCCCc-----eeeeec--cccc-------cCCCCCCCC----CC-C-ccccCCCCCe
Q 008038 58 QFPGPTIRA-RAGDTIAVELTNKLYTEG-----VVIHWH--GIRQ-------LGTPWADGT----AS-I-SQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v-~~Gd~v~v~v~N~l~~~~-----~siH~H--G~~~-------~~~~~~DG~----~~-~-~q~~i~pG~~ 116 (580)
+|-...|.| ++||+|+|+|+|. ...+ |++-+- |... ..-..++=+ +. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~-g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHS-GSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEEC-SSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEEC-CCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 444468999 9999999999999 5553 655442 2110 000011111 10 0 0124899999
Q ss_pred EEEEEEcC--CCcc-eeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKVD--KAGT-YFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~~--~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+++.|.+. ++|+ |||.|-...|.. ||.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999996 7877 999998777777 899999983
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.3e-05 Score=66.16 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=57.7
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+| .|.+.. .|.++++...+- . ..+.. .. ...++.+.+.||+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p-----~-~~~~~-~~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGF------PHNIVFDEDSIP-----S-GVDAS-KI------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECSSC------CBCCEECTTSSC-----T-TCCHH-HH------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCc-----c-ccccc-cc------ccccCccccCCCCEEEEEE--
Confidence 388999999988 676655 899999875430 0 01100 00 0123556788998877765
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||+ .|.++||.+.+.|
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 69999999999 8999999999876
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.92 E-value=2.4e-05 Score=69.99 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=59.2
Q ss_pred eEEccCCcEEEEEEEcCC-CCCCCCCCCCCeeecCC--CeEEEeecCCCCCcccccccCCCCCCccce-------EEeCC
Q 008038 447 VYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGH--DFWVLGRGEGKFTKEDEKKFNLKNPPLKNT-------AVIFP 516 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~-~~~~~~~~~HP~HlHG~--~F~vv~~~~g~~~~~~~~~~~~~~p~~rDT-------v~vpp 516 (580)
.+.++.|+.|.+++.|.+ .+ .|-|-++.. .|.. . |...+. ..|.|
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~~~~~~~-------~------------~~~~~~~~~~~~~~~i~P 116 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKKGPPYAV-------M------------PVIDPIVAGTGFSPVPKD 116 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESCCSCCCS-------S------------CCCCSEEEEBCCCCCCBT
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeecCcchhc-------c------------ccccccccccccccccCC
Confidence 489999999999999963 33 566665532 1100 0 001111 25688
Q ss_pred Cc--EEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 517 YG--WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 517 ~g--~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
|+ ...+.|++ .||.|.||||+..|...||-+.+.+
T Consensus 117 G~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 117 GKFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp TBEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred CCceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99 89999999 9999999999999999999998865
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.86 E-value=3.8e-05 Score=64.04 Aligned_cols=71 Identities=23% Similarity=0.292 Sum_probs=50.6
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|. |.+.. .|.+|+|... .|. + .+ ++-.+.||+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~-~------------~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGE-A------------AL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS-S------------CE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCc-c------------cc-cccccCCCCEEEEEe--
Confidence 3899999999885 76655 7999988522 111 0 01 222367888766655
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||++ |. ||.+.+.|
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999998 65 99988865
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.82 E-value=3.8e-05 Score=65.84 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.+.|+|++||+|+ ++|. .. .|+++...- ..-+|.. ...+.||+++++.| +++|+|||+|-. |..
T Consensus 20 P~~i~V~~GdtV~--f~n~-d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF--~~~G~y~y~C~~--H~~ 83 (122)
T 2ux6_A 20 PASLKVAPGDTVT--FIPT-DK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF--TAPGVYGVKCTP--HPF 83 (122)
T ss_dssp SSEEEECTTEEEE--EEES-SS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEEETT--EEE
T ss_pred CCEEEECCCCEEE--EEEC-CC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe--CCCEEEEEEeCC--Ccc
Confidence 4789999999865 5576 32 455544431 1112221 23457899999888 689999999975 322
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
|.|.|+|.+.+
T Consensus 84 --M~G~I~V~~~p 94 (122)
T 2ux6_A 84 --MVGVVQVGDAP 94 (122)
T ss_dssp --EEEEEEESSSC
T ss_pred --CEEEEEEeCCC
Confidence 99999998743
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00012 Score=79.10 Aligned_cols=76 Identities=22% Similarity=0.296 Sum_probs=60.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|.+.|.... ....|.|+++++.+. ..+.||....+.|++
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEEC
T ss_pred EEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEEC
Confidence 38899999999999995321 112688888765321 467889999999999
Q ss_pred cCceeeEEeee---cchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCH---IEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCH---il~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|||| ...|. ||.+.+.+.+
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 99999999999 45775 9999998754
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0006 Score=57.95 Aligned_cols=86 Identities=19% Similarity=0.219 Sum_probs=56.8
Q ss_pred CCCCCeEEecC-CCEEEEEEEeCCCCCc-----eeeeec-----------cccccCCCCCCCCC----CC--ccccCCCC
Q 008038 58 QFPGPTIRARA-GDTIAVELTNKLYTEG-----VVIHWH-----------GIRQLGTPWADGTA----SI--SQCPINPG 114 (580)
Q Consensus 58 ~~pgP~l~v~~-Gd~v~v~v~N~l~~~~-----~siH~H-----------G~~~~~~~~~DG~~----~~--~q~~i~pG 114 (580)
+|--..|.|+. |++|+|+|+|. ...+ |++-+= |+.. + +.+|-+| .+ ....|.||
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~-G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~-~-~~~~y~~~~d~~via~t~~l~pG 90 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHP-GNLPKNVMGHNWVLSTAADMQGVVTDGMAS-G-LDKDYLKPDDSRVIAHTKLIGSG 90 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECC-SSCCHHHHCBCCEEEEHHHHHHHHHHHHHH-C-GGGTTSCTTCTTCCEECCCBCTT
T ss_pred EEecCEEEEecCCCEEEEEEEEC-CcccccccCceEEEcccchHHHHHHHHHhc-C-hhhccCCCCCccceeccceeCCC
Confidence 34457899976 99999999999 5543 444331 1111 0 1111121 11 11247999
Q ss_pred CeEEEEEEcC---CCcceeeecCcchhhccccEEEEEEE
Q 008038 115 ETYLYRFKVD---KAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 115 ~~~~y~f~~~---~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
++++..|+.. ++|+|.|.|. .|. ||.|.|+|.
T Consensus 91 es~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 91 EKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999999996 8999999999 555 899999983
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0017 Score=53.09 Aligned_cols=79 Identities=10% Similarity=0.171 Sum_probs=53.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|. |.+.. .|-+.+....+ ...++. . ....+...+.||+...+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~------~H~v~~~~~~~------p~g~~~---~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGF------PHNIVFDEDAV------PAGVDA---D------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECTTSS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEeCCCC------cccccc---c------cccccccccCCCCEEEEEc--
Confidence 3889999999986 65544 67666553110 001110 0 0113446788999877766
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|-+ |..+||.+.+.|
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 899999999985 999999998865
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0031 Score=54.77 Aligned_cols=73 Identities=19% Similarity=0.317 Sum_probs=54.4
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc---chh
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL---GMQ 138 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~~ 138 (580)
..|.++.|++|++.++|. +..+++..-.+ |. ...+.||+.-++.|+++++|+|+|+|.- ..|
T Consensus 60 ~~l~Vp~G~~V~~~vts~--DV~Hsf~ip~~---------~~----k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP--DVIHGFHVEGT---------NI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS--SSCEEEEETTS---------SC----EEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeC--CccceEEecCC---------Cc----eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 489999999999999998 33444332221 11 2356899999999999999999999962 233
Q ss_pred hccccEEEEEEEc
Q 008038 139 RSAGLYGSLIVDV 151 (580)
Q Consensus 139 ~~~Gl~G~liV~~ 151 (580)
.+|.|.++|.+
T Consensus 125 --~~M~g~v~V~~ 135 (135)
T 2cua_A 125 --QNMFGTIVVKE 135 (135)
T ss_dssp --TTCEEEEEEEC
T ss_pred --CCCEEEEEEEC
Confidence 57999999864
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0019 Score=53.59 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=49.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|+ |.+.. .|.+++....- +.. .-++-.+.+|+...+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVM------PHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------cEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--
Confidence 3889999999987 66555 67776653210 000 01233467888777666
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|-+ |. ||.+.+.|
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 899999999987 76 99998865
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0014 Score=56.00 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=50.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|++|+|+..+ . .|.+..+.. .++ .-.+.+.+.+|....+.| +
T Consensus 24 i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF--~ 70 (124)
T 3ef4_A 24 VKVEAGDTVKFVPTD---K------SHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA--E 70 (124)
T ss_dssp EEECTTCEEEEECSS---S------SCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--C
T ss_pred EEECCCCEEEEEECC---C------CccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--C
Confidence 889999999998543 3 677766521 111 001122345777655555 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.|.|||- .|...||.+.+.|+.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 9999999995 899999999998864
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0021 Score=54.84 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=50.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|++|+|++.| . .|-+..+.. .++ .. .+.+.+.||+...+.| +
T Consensus 23 i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P-~g-----------~~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 23 VRAEPGDVINFVPTD---K------SHNVEAIKE----------ILP-EG-----------VESFKSKINESYTLTV--T 69 (123)
T ss_dssp EEECTTEEEEEEESS---T------TCCCEECTT----------SSC-TT-----------CCCCBCCTTCCEEEEE--C
T ss_pred EEECCCCEEEEEECC---C------CceEEEcCC----------cCC-CC-----------ccceecCCCCEEEEEe--C
Confidence 899999999998876 2 466655421 010 00 0112235677655555 8
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.|.|+|- .|...||.+.+.|+.
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 9999999999 899999999998863
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0055 Score=55.05 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=57.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~ 139 (580)
...|.++.|+.|++.++|. +..++...-++.. +.-+.||+.-++.|+++++|+|++.|. .-...
T Consensus 92 Pn~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi-------------k~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~ 156 (168)
T 3s8f_B 92 PNPIEVPQGAEIVFKITSP--DVIHGFHVEGTNI-------------NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 156 (168)
T ss_dssp SSSEEEETTSEEEEEEECS--SSCEEEEETTSSC-------------EEEECTTBCEEEEEECCSCEEEEEECCSCCSTT
T ss_pred cCEEEEeCCCeEEEEEecC--CceEEEEECCCCe-------------EEEecCCceeEEEEEeCCCEEEEEECCcCCCCC
Confidence 3689999999999999998 4444444333211 345679999999999999999999998 33344
Q ss_pred ccccEEEEEEEc
Q 008038 140 SAGLYGSLIVDV 151 (580)
Q Consensus 140 ~~Gl~G~liV~~ 151 (580)
-.+|.|-++|++
T Consensus 157 Hs~M~g~V~V~e 168 (168)
T 3s8f_B 157 HQNMFGTIVVKE 168 (168)
T ss_dssp GGGCEEEEEEEC
T ss_pred cCCCEEEEEEeC
Confidence 467999999973
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0027 Score=54.99 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=49.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|+ |.+.. .|.+++.... .+. ..-++-.+.||+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~--------------~~~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEc--
Confidence 3889999999986 76655 6877765321 000 001233467888777666
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|||-+ |. ||.+.+.|
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999986 76 99998865
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0017 Score=55.75 Aligned_cols=73 Identities=21% Similarity=0.235 Sum_probs=48.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+..|. .|-+..+... ++ .. ...+.+.||+...+. +
T Consensus 24 ~i~V~~GDtVtf~n~~~---------~H~v~~~~~~----------~P-~g-----------~~~f~s~pGet~s~T--F 70 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---------GHNSALMKGG----------AP-EG-----------AETWKGKINEEITVT--L 70 (127)
T ss_dssp EEEECTTCEEEEECSSS---------SCCCEECTTC----------SC-TT-----------CCCCBCCTTCCCEEE--C
T ss_pred EEEECCCCEEEEEECCC---------CceEEEccCc----------CC-CC-----------ccceecCCCCEEEEE--e
Confidence 38999999999986652 3555544210 10 00 011223467765444 4
Q ss_pred cCceeeEEeeecchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|||- .|...||.+.+.|+.
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999998764
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.01 Score=53.26 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=61.1
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-------ccccccCC--CCCCccceEEeCCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-------EDEKKFNL--KNPPLKNTAVIFPY 517 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-------~~~~~~~~--~~p~~rDTv~vpp~ 517 (580)
+.+ +.|+.|.|+|.|.+.. . -=-=+|.|.+...+. ++. .....+-. ....+..+..|.||
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------P--KASMGHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------C--HHHHCBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------c--cccccceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 888 9999999999997643 2 000023444433211 000 00000000 01134456678999
Q ss_pred cEEEEEEEec--CceeeEEeeecchhhhcccEEEEecc
Q 008038 518 GWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 518 g~v~irf~ad--npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+...|.|.++ .||.|-|+|-+-.|.. ||-+.|.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999999998 899988763
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.031 Score=47.93 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=61.5
Q ss_pred EEccCC-cEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc-------c-cccccCC--CCCCccceEEeCC
Q 008038 448 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-------E-DEKKFNL--KNPPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~~~G-~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~-------~-~~~~~~~--~~p~~rDTv~vpp 516 (580)
+.++.| +.|.+++.|.+.. . ---=+|.|.+...+. ... . ....+-. ....+..+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~--~~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------P--KTGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------C--HHHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------c--ccccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 889999 9999999997653 1 000024444443221 000 0 0000000 0112445667899
Q ss_pred CcEEEEEEEec---CceeeEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 9999999999999998 899988663
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.021 Score=48.58 Aligned_cols=36 Identities=28% Similarity=0.557 Sum_probs=29.1
Q ss_pred CCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 515 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 515 pp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.||.... ++++.||.|.|+|- .|...||.+.+.|.+
T Consensus 59 ~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYV--LTVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEE--EECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEE--EEeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677544 45589999999997 699999999998764
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=95.64 E-value=0.025 Score=48.13 Aligned_cols=37 Identities=24% Similarity=0.505 Sum_probs=29.7
Q ss_pred eCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 514 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 514 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||+...+ +++.||.|.|+|- .|...||.+.+.|.+
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 357776554 4589999999997 599999999998764
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.046 Score=47.32 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=51.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.+.|.+. .|. |.+-+.+ . -+.+.||....+.|+++
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~-----------------~---k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN-----------------I---NVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS-----------------C---EEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC-----------------c---eeEeCCCCcEEEEEEcC
Confidence 889999999999998653 344 4432210 1 14466788888999999
Q ss_pred CceeeEEeeec---chhhhcccEEEEec
Q 008038 528 NPGAWAFHCHI---EPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHi---l~H~d~GM~~~~~~ 552 (580)
.||.|.++|.. ..| .+|-+.+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999987 667 488887765
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=95.27 E-value=0.076 Score=44.96 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=59.5
Q ss_pred EEccC-CcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC-CC-Cc---cc-ccccC-C-CCCCccceEEeCCCc
Q 008038 448 YMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG-KF-TK---ED-EKKFN-L-KNPPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~~~-G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g-~~-~~---~~-~~~~~-~-~~p~~rDTv~vpp~g 518 (580)
+.++. |+.|+++|.|.+.+ + --.=||.|.+...+.- .. .. .. ..+|- . ...+...|..|.||+
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~------p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGe 91 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL------P--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGE 91 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC------C--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCcc------c--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCc
Confidence 78875 99999999998754 1 1111466655532110 00 00 00 01111 0 123566788899999
Q ss_pred EEEEEEEec---CceeeEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~ad---npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...|.|.+. .+|.|-|-|- .|. ||-+.+.+
T Consensus 92 s~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 92 KDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999997 8999999999 888 99998865
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.071 Score=56.69 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=57.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|++.|.... ....|.|.+.+... -+.+.||....+.|++
T Consensus 559 eI~VP~GdtVrfiLTN~D~v---eDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQI---EDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVA 608 (638)
T ss_dssp EEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEEC
T ss_pred EEEEecCceeEEEEecCCcC---CCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEc
Confidence 38899999999999996321 01167776654321 1357789999999999
Q ss_pred cCceeeEEeeecchhhh-cccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFH-IGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d-~GM~~~~~~~~ 554 (580)
+.||.|.++|...-|.. .+|.+.+.|.+
T Consensus 609 dkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 609 DKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999999765543 57988887754
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=94.92 E-value=0.1 Score=44.62 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=59.9
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc--cc------ccccCC-CC-CCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED------EKKFNL-KN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~--~~------~~~~~~-~~-p~~rDTv~vpp 516 (580)
+.+ +.|+.|.+++.|.+.. + ---=+|.|.+...+. ... .+ ...+-. .+ ..+..+..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 788 8999999999997743 2 000023444433210 000 00 000000 01 12335667899
Q ss_pred CcEEEEEEEec--Ccee-eEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...|.|.++ .||. |-|.|-+-.|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7866 999999999998 899988763
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.082 Score=45.22 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=60.0
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc--cc------ccccCC-CC-CCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED------EKKFNL-KN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~--~~------~~~~~~-~~-p~~rDTv~vpp 516 (580)
+.+ +.|+.|.+++.|.+.. + ---=+|.|.+...+. ... .+ ...+-. .+ ..+..+-.|.|
T Consensus 19 i~V~k~G~~vtv~~~N~g~~------p--~~~m~Hn~vi~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKL------P--KAAMGHNVVVSKKSD--ESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEECTTCSEEEEEEEECSCS------C--HHHHCBCCEEEETTH--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCcEEEEEEEECCCC------c--ccCCCceEEEccccc--hhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 788 8899999999997743 2 000023443332110 000 00 000000 01 12345667899
Q ss_pred CcEEEEEEEec--Ccee-eEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...+.|.+. .||. |-|.|-+-.|.. ||-+.+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999999999 999998764
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.11 Score=44.40 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=59.2
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCC------CCCccccccc-CCCC-CCccceEEeCCCc
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG------KFTKEDEKKF-NLKN-PPLKNTAVIFPYG 518 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g------~~~~~~~~~~-~~~~-p~~rDTv~vpp~g 518 (580)
+.+ +.|+.|.+++.|.+.. + -=-=+|.|.+...+.. .........+ ...+ ..+..|-.|.||+
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 888 8999999999997643 2 0000234433332100 0000000000 0001 1234455789999
Q ss_pred EEEEEEEec--Ccee-eEEeeecchhhhcccEEEEec
Q 008038 519 WTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 519 ~v~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~~ 552 (580)
...+.|.+. .||. |-|.|-+-.|.. ||-+.+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999998 7887 999999999999 89998865
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=94.31 E-value=0.11 Score=44.03 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=45.4
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+ |.+. .|-+++..- .++. .. ..+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-------~H~v~~~~~----------~~p~-~~-----------~~~~~~~g~t~~~tF-- 68 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-------GHNVETIKG----------MIPD-GA-----------EAFKSKINENYKVTF-- 68 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-------SCCCEECTT----------CSCT-TC-----------CCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEE--ECCC-------CcEEEEccc----------ccCC-Cc-----------ceeecCCCCEEEEEe--
Confidence 3889999999986 4321 466666531 1110 00 011234677655555
Q ss_pred cCceeeEEeeecchhhhcccEEEEeccc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.||.|.|+|-+ |.. |.+.+.|.+
T Consensus 69 ~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 69 TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 899999999976 776 999997754
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=93.24 E-value=0.37 Score=43.07 Aligned_cols=71 Identities=15% Similarity=0.256 Sum_probs=52.7
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.+.|.+- .|.| +|-+.+ . -+.+-||....+.|.++
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf-------~IP~lg-----------------i---k~da~PG~~n~~~~~~~ 140 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGF-------HVEGTN-----------------I---NVEVLPGEVSTVRYTFK 140 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEE-------EETTSS-----------------C---EEEECTTBCEEEEEECC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEE-------EECCCC-----------------e---EEEecCCceeEEEEEeC
Confidence 889999999999999754 4544 442211 1 13456788888999999
Q ss_pred CceeeEEeeec-chhhhcccEEEEec
Q 008038 528 NPGAWAFHCHI-EPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHi-l~H~d~GM~~~~~~ 552 (580)
.||.|.+.|.. --+...+|.+.+.|
T Consensus 141 kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 141 RPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp SCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 99999999985 55566788887765
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=89.74 E-value=5.2 Score=33.37 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=54.3
Q ss_pred cCCEE--EEEEeecCCceeEEEEEe-CeeeEEEEE--CCcccC--------ceeeeeEEEcCCceEEEEEEeCC-CCCcc
Q 008038 239 PNKTY--RLRIASTTALASLNLAVK-NHKMVVVEA--DGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 304 (580)
Q Consensus 239 ~Ge~~--rlRliNag~~~~~~~~i~-gh~~~via~--DG~~v~--------P~~~d~v~l~pGeR~dv~v~~~~-~~~g~ 304 (580)
.|+.+ .|.+.|.+.. ...+.+. |+++.++-. +|..+- .+......|.|||...+-...++ .++|.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45554 7788898855 6777774 566555544 476651 44677899999999999999984 35799
Q ss_pred eEEEEeecCC
Q 008038 305 YWISAGVRGR 314 (580)
Q Consensus 305 y~l~~~~~~~ 314 (580)
|.+.+.....
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9998876554
|
| >1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A | Back alignment and structure |
|---|
Probab=86.08 E-value=2.4 Score=38.90 Aligned_cols=74 Identities=14% Similarity=0.041 Sum_probs=55.2
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecC-cchhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH-LGMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H-~~~~~~ 140 (580)
..|.+..|+.|++.|++. +..++...-.+.. +.-+-||..-...|.++++|+|+..|. .-...-
T Consensus 41 n~l~lP~g~~V~~~lTS~--DViHSF~IP~lgv-------------K~daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN--SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIANEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEECCSSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC--CceeeEEecccCc-------------EEEecCCceEEEEEEeCCCeEEEEEcccccccch
Confidence 479999999999999998 4555554444322 345678999999999999999999998 222223
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
..|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 4588888887
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 580 | ||||
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 2e-70 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 6e-64 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 3e-46 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 2e-36 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 1e-35 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 5e-35 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 6e-31 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 0.003 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 7e-30 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 1e-29 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 7e-28 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 1e-27 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 4e-27 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 2e-26 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 3e-26 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 0.001 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 1e-25 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 8e-04 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 4e-25 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 0.004 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 1e-24 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 1e-23 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 2e-23 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 3e-23 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 9e-22 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 1e-21 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 2e-21 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 3e-05 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 1e-20 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 2e-20 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 7e-20 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 5e-18 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 6e-18 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 3e-08 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 4e-17 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 0.002 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 4e-16 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 3e-12 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 1e-15 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 3e-11 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 7e-14 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 2e-13 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 9e-09 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 2e-13 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 9e-07 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 3e-09 | |
| d1sddb1 | 67 | b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B | 2e-08 | |
| d1ibya_ | 112 | b.6.1.4 (A:) Red copper protein nitrosocyanin {Nit | 2e-07 | |
| d1qhqa_ | 139 | b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus | 5e-07 | |
| d1qhqa_ | 139 | b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus | 5e-05 | |
| d1fwxa1 | 132 | b.6.1.4 (A:452-581) Nitrous oxide reductase, C-ter | 4e-06 | |
| d1qnia1 | 131 | b.6.1.4 (A:451-581) Nitrous oxide reductase, C-ter | 5e-06 | |
| d2bw4a2 | 173 | b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali | 7e-06 | |
| d1kbva2 | 151 | b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse | 1e-05 | |
| d1kbva2 | 151 | b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse | 1e-05 | |
| d1oe1a2 | 177 | b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcali | 1e-04 | |
| d2q5ba1 | 105 | b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Ph | 0.001 | |
| d1plca_ | 99 | b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), | 0.001 | |
| d2ov0a1 | 105 | b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrific | 0.002 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 223 bits (569), Expect = 2e-70
Identities = 145/213 (68%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 368 PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFS 427
PP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F
Sbjct: 1 PPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFP 60
Query: 428 NEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG 487
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVLG
Sbjct: 61 EDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLG 120
Query: 488 RGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMG 547
G+GKF+ E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMG
Sbjct: 121 YGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMG 180
Query: 548 VVLALGVETVGNIPNQALACGLTGKRFM-NPKQ 579
VV A GVE VG IP +ALACG T K + NPK
Sbjct: 181 VVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 213
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 206 bits (525), Expect = 6e-64
Identities = 147/210 (70%), Positives = 177/210 (84%), Gaps = 1/210 (0%)
Query: 158 PFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 217
PFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRGQF+CS+AA + +
Sbjct: 1 PFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKY-DS 59
Query: 218 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 277
+ E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH+++VVEADGNYVQP
Sbjct: 60 NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 119
Query: 278 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPL 337
F D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY P S SK+P
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPT 179
Query: 338 SPPPITPRWDDYDHSKSFSNKIFALMGSPK 367
SPPP TP WDD+D SK+F+ +I A MGSPK
Sbjct: 180 SPPPQTPAWDDFDRSKNFTYRITAAMGSPK 209
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 156 bits (396), Expect = 3e-46
Identities = 104/129 (80%), Positives = 114/129 (88%)
Query: 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIH 88
S+ RHYKWEVEYMFW+P+C E+IVMGINGQFPGPTIRA AGD++ VELTNKL+TEGVVIH
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 89 WHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLI 148
WHGI Q GTPWADGTASISQC INPGET+ Y F VD GT+FYHGHLGMQRSAGLYGSLI
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLI 120
Query: 149 VDVADGEKE 157
VD G+KE
Sbjct: 121 VDPPQGKKE 129
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 129 bits (326), Expect = 2e-36
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 34 YKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY----TEGVVIHW 89
V SPD + +NG FP P I + GD + + + L + IHW
Sbjct: 6 ASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHW 65
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLI 148
HG Q GT WADG A ++QCPI G ++LY F V D+AGT++YH HL Q GL G +
Sbjct: 66 HGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 149 VD 150
V
Sbjct: 126 VY 127
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 127 bits (321), Expect = 1e-35
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 36 WEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL----YTEGVVIHWHG 91
+ SPD + +NG GP IR D + + N L IHWHG
Sbjct: 9 MTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHG 67
Query: 92 IRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVD 150
+ Q GT WADG ++QCPI+PG +LY+F AGT++YH H G Q GL G +++
Sbjct: 68 LFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIY 127
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 126 bits (318), Expect = 5e-35
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 31 TRHYKWEVEYMFWSPDC-KESIVMGINGQFPGPTIRARAGDTIAVELTNK----LYTEGV 85
T + PD + G P I D + + ++
Sbjct: 2 TVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRAT 61
Query: 86 VIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLY 144
IHWHG Q GT DG A ++QCPI P E+++Y F V +AGTY+YH HL Q GL
Sbjct: 62 SIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLR 121
Query: 145 GSLIVD 150
G+ +V
Sbjct: 122 GAFVVY 127
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 115 bits (290), Expect = 6e-31
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 28 GSKTRHYKWEVEYMFWSPDC--KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGV 85
G K + +E D M NG PGPT+ GD + + L N
Sbjct: 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN--- 85
Query: 86 VIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH----LGMQRSA 141
H + G A G +NPGE RFK D++GT+ YH + +
Sbjct: 86 -AMPHNVEFHGATGALGG--AKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142
Query: 142 GLYGSLIVDVADGEKEP 158
G+ G+L+V DG K+P
Sbjct: 143 GMSGTLMVLPRDGLKDP 159
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 36.6 bits (84), Expect = 0.003
Identities = 17/89 (19%), Positives = 26/89 (29%), Gaps = 21/89 (23%)
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 528
+ P ++ H G + P LRF AD
Sbjct: 82 PATNAMPHNVEFHGATGALGGAK-------------------LTNVNPGEQATLRFKADR 122
Query: 529 PGAWAFHCHIEPH--FHIGMGVVLALGVE 555
G + +HC E +H+ G+ L V
Sbjct: 123 SGTFVYHCAPEGMVPWHVVSGMSGTLMVL 151
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 113 bits (283), Expect = 7e-30
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 24 ETSYGSKTRHYKWEVEYM--FWSPD-CKESIVMGINGQFPGPTIRARAGDTIAVELTNKL 80
T T+ Y + + + + PD + VM ING GP I A GDT+ V + N L
Sbjct: 26 STPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNL 85
Query: 81 YTEGVVIHWHGIRQLGTPWADGTASISQC-PINPGETYLYRFKVDKAGTYFYHGHLGMQR 139
T G IHWHGI Q T DG +++C G YR++ + GT +YH H Q
Sbjct: 86 VTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQY 145
Query: 140 SAGLYGSLIVD 150
G+ G++ ++
Sbjct: 146 GNGVVGTIQIN 156
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 112 bits (282), Expect = 1e-29
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 24/184 (13%)
Query: 162 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ 221
D + ++DW+H L P + P T LING G+ +
Sbjct: 5 DASTVITIADWYHSLSTV----LFPNPNKAPPAPDTTLINGLGRNSA------------- 47
Query: 222 CKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVD 281
++ VQ K YR RI ST+ + ++ H+M V+E DG QP VD
Sbjct: 48 ----NPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVD 103
Query: 282 DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL--LNYHPTSASKIPLSP 339
+ I++G+ YSV++ NQ NYWI A + + Y + ++ S
Sbjct: 104 SLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQ 162
Query: 340 PPIT 343
T
Sbjct: 163 NSGT 166
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 107 bits (269), Expect = 7e-28
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 160 HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 219
D + L+DW+H ++ +P LING+G++ AA S
Sbjct: 8 EDDENTIITLADWYHIPAPS---------IQGAAQPDATLINGKGRYVGGPAAELS---- 54
Query: 220 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFE 279
I++V+ K YR+R+ S + + ++ H++ ++E DG +P
Sbjct: 55 --------------IVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHT 100
Query: 280 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT------LLNYHPTSAS 333
VD + I++G+ YS +L NQ NYWI A + +L Y + +
Sbjct: 101 VDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA 159
Query: 334 KIPLSPPP 341
S P
Sbjct: 160 DPTTSANP 167
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 107 bits (267), Expect = 1e-27
Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 32/190 (16%)
Query: 167 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 226
++D+++R+ + + + +LING + ++N
Sbjct: 8 FPITDYYYRAADDLVHFTQNNAPPF---SDNVLINGTAVNPNTGEGQYAN---------- 54
Query: 227 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIY 286
+ + P K +RLRI +T+ +++ NH M V+ AD V VD + +
Sbjct: 55 --------VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLA 106
Query: 287 SGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPI 342
G+ Y V++ ++ P NYW + G+ P + +Y P
Sbjct: 107 VGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP------GGLPT 159
Query: 343 TPRWDDYDHS 352
DH
Sbjct: 160 DEGTPPVDHQ 169
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 105 bits (262), Expect = 4e-27
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 28 GSKTRHYKWEVEY--MFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGV 85
G + + +E + + E M NG PGP + D + + L N
Sbjct: 28 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTN--- 84
Query: 86 VIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH----LGMQRSA 141
H I A G + +NPGE RFK K G + YH + ++
Sbjct: 85 -TLLHNIDFHAATGALGGG--ALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 141
Query: 142 GLYGSLIVDVADGEKE 157
G+ G+++V DG K+
Sbjct: 142 GMNGAIMVLPRDGLKD 157
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 104 bits (261), Expect = 2e-26
Identities = 51/210 (24%), Positives = 70/210 (33%), Gaps = 40/210 (19%)
Query: 368 PPTNFHRRLTL---LNTQNTINGFTKWAINNVSLTLPP-TPYLGSIKYGLKDAFDQNGPP 423
P +F +R + T W +N + + P + I G
Sbjct: 4 PVNSFVKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTG----------- 52
Query: 424 ENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 483
N + + + + L N S HP HLHGHDF
Sbjct: 53 --------------NTSYPVSDNIVQVDAVDQWTYWLIE-NDPEGPFSLPHPMHLHGHDF 97
Query: 484 WVLGRGEGKFT----------KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 533
VLGR D + N NPP ++T ++ GW L F DNPGAW
Sbjct: 98 LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWL 157
Query: 534 FHCHIEPHFHIGMGVVLALGVETVGNIPNQ 563
FHCHI H G+ V + +Q
Sbjct: 158 FHCHIAWHVSGGLSVDFLERPADLRQRISQ 187
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 102 bits (255), Expect = 3e-26
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 38 VEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT 97
VE D E +G PG IR R GDT+ VE +N + H +
Sbjct: 34 VEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSS----TVPHNVDFHAA 89
Query: 98 PWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGH---LGMQRSAGLYGSLIVDVADG 154
G + PG T + FK + G Y YH +GM + G+YG ++V+ +G
Sbjct: 90 TGQGGG--AAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147
Query: 155 EKE 157
+
Sbjct: 148 LPK 150
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 37.7 bits (87), Expect = 0.001
Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 17/80 (21%)
Query: 477 HLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHC 536
H DF G P + F A PG + +HC
Sbjct: 80 VPHNVDFHAATGQGGGAA----------------ATFTAPGRTSTFSFKALQPGLYIYHC 123
Query: 537 HIEPH-FHIGMGVVLALGVE 555
+ P HI G+ + VE
Sbjct: 124 AVAPVGMHIANGMYGLILVE 143
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 102 bits (254), Expect = 1e-25
Identities = 55/203 (27%), Positives = 71/203 (34%), Gaps = 31/203 (15%)
Query: 360 FALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQ 419
A M P PT L N NG T + INN S T P P L I G + A D
Sbjct: 8 LARMPVPGSPTPGGVDKAL-NLAFNFNG-TNFFINNASFTPPTVPVLLQILSGAQTAQDL 65
Query: 420 NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLH 479
VY L ++T+++ L HP+HLH
Sbjct: 66 LPAGS----------------------VYPLPAHSTIEITLPA---TALAPGAPHPFHLH 100
Query: 480 GHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIE 539
GH F V+ ++ F + +T +RF DNPG W HCHI+
Sbjct: 101 GHAFAVVRSAGSTTYNYNDPIF----RDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHID 156
Query: 540 PHFHIGMGVVLALGVETVGNIPN 562
H G +V A V V
Sbjct: 157 FHLEAGFAIVFAEDVADVKAANP 179
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 38.7 bits (89), Expect = 8e-04
Identities = 22/97 (22%), Positives = 28/97 (28%), Gaps = 10/97 (10%)
Query: 72 IAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCP----------INPGETYLYRF 121
I + T H HG A T P G+ RF
Sbjct: 82 ITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRF 141
Query: 122 KVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP 158
+ D G +F H H+ AG DVAD +
Sbjct: 142 QTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAAN 178
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 100 bits (250), Expect = 4e-25
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 35/175 (20%)
Query: 389 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 448
++ IN + P P L I G + A D VY
Sbjct: 35 GRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGS----------------------VY 72
Query: 449 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 508
L N V++++ P HP+HLHGH F V+ +N NP
Sbjct: 73 ELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSVVRSA-------GSSTYNFVNPVK 120
Query: 509 KNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPN 562
++ + G +RFV DNPG W FHCHIE H G+ +V A + + N
Sbjct: 121 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANN 175
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 36.7 bits (84), Expect = 0.004
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 8/102 (7%)
Query: 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI-------- 111
G + + + + H HG A + P+
Sbjct: 68 AGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLG 127
Query: 112 NPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153
G+ RF D G +F+H H+ GL D+A+
Sbjct: 128 VTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN 169
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 98.3 bits (244), Expect = 1e-24
Identities = 42/185 (22%), Positives = 69/185 (37%), Gaps = 30/185 (16%)
Query: 162 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ 221
+ + L+DW+H + R+ LING G+
Sbjct: 11 NESTVITLTDWYHTAARLGP--------RFPLGADATLINGLGRSAS------------- 49
Query: 222 CKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVD 281
A +++VQ K YR R+ S + + ++ H + V+E DG QP VD
Sbjct: 50 -----TPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVD 104
Query: 282 DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP--ATPPALTLLNYHPTSASKIPLSP 339
+ I++ + YS +L NQ NYWI A A +L Y ++ P +
Sbjct: 105 SIQIFAAQRYSFVLNANQTVG-NYWIRANPNFGTVGFAGGINSAILRYQGAPVAE-PTTT 162
Query: 340 PPITP 344
+
Sbjct: 163 QTTSV 167
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 94.8 bits (235), Expect = 1e-23
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 30 KTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW 89
+ + + K + G NG GP ++ + G + V++ N+L E +HW
Sbjct: 14 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLHW 72
Query: 90 HGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK-AGTYFYHGHL----GMQRSAGLY 144
HG+ DG Q I PG VD+ A T ++H H G Q + GL
Sbjct: 73 HGLEV--PGEVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLA 127
Query: 145 GSLIVDVADGEK 156
G ++++ + K
Sbjct: 128 GLVVIEDDEILK 139
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 94.4 bits (234), Expect = 2e-23
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 12/133 (9%)
Query: 28 GSKTRHYKWEVEYMFWSPDCKESI-VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVV 86
G ++ + D + M +G PGP + GD + + L N
Sbjct: 27 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPEN---- 82
Query: 87 IHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLG-----MQRSA 141
H I A G INPGE + RFK +AG + YH G +
Sbjct: 83 TMPHNIDFHAATGALGGG--GLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVS 140
Query: 142 GLYGSLIVDVADG 154
G+ G ++V DG
Sbjct: 141 GMAGCIMVLPRDG 153
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 3e-23
Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 26/160 (16%)
Query: 23 FETSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT 82
G + + ++Y + + +I + F GP I+A GD + V L N
Sbjct: 40 GPDRIGRLYKKALY-LQYTDETF--RTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLAS- 95
Query: 83 EGVVIHWHGIRQLGT----PWADGT--ASISQCPINPGETYLYRFKVDK----------A 126
H HGI + D T + + PGE Y Y +
Sbjct: 96 RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 155
Query: 127 GTYFYHGHLGMQR--SAGLYGSLIVDVADGEKEPFHYDGE 164
T YH H+ + ++GL G LI+ +K+ + E
Sbjct: 156 VTRIYHSHIDAPKDIASGLIGPLIIC----KKDSLDKEKE 191
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 90.7 bits (224), Expect = 9e-22
Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 31/157 (19%)
Query: 25 TSYGSKTRHYKWEVEYMFWS--PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKL-- 80
+ +Y+ +E D + + G NG FPGPTI + + + V+ N L
Sbjct: 18 VQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPS 77
Query: 81 -------------------YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGE---TYL 118
V+H HG A S+ G +
Sbjct: 78 THFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREV 137
Query: 119 YRFKVDK-AGTYFYHGHL----GMQRSAGLYGSLIVD 150
Y + + +YH H + AGL G+ I+
Sbjct: 138 YHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIH 174
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 90.7 bits (224), Expect = 1e-21
Identities = 48/212 (22%), Positives = 69/212 (32%), Gaps = 40/212 (18%)
Query: 365 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 424
P L L +N + IN P P L I G+ + D
Sbjct: 15 GNPVPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTNPND------ 66
Query: 425 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 484
G V L N +++ + HP+HLHGH+F
Sbjct: 67 ----------------LLPGGAVISLPANQVIEISIPGGG--------NHPFHLHGHNFD 102
Query: 485 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT-ALRFVADNPGAWAFHCHIEPHFH 543
V+ +N NP ++ I G RFV DNPG W HCHI+ H
Sbjct: 103 VVRTP-------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLE 155
Query: 544 IGMGVVLALGVETVGNIPNQALACGLTGKRFM 575
G+ VV A + + + A ++
Sbjct: 156 AGLAVVFAEDIPNIPIANAISPAWDDLCPKYN 187
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 88.7 bits (219), Expect = 2e-21
Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 12/130 (9%)
Query: 25 TSYGSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYT-- 82
T G V F P ++ + PT+ AG T+ V N
Sbjct: 30 TYSGKTVHVVAAAVLPGFPFP------SFEVHDK-KNPTLEIPAGATVDVTFINTNKGFG 82
Query: 83 EGVVIHWHGI--RQLGTPWADGTASISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQR 139
I G + + G+ F AGTY+Y +
Sbjct: 83 HSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHA 142
Query: 140 SAGLYGSLIV 149
+ G +G ++V
Sbjct: 143 ATGQFGKIVV 152
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 42.1 bits (98), Expect = 3e-05
Identities = 14/93 (15%), Positives = 21/93 (22%), Gaps = 16/93 (17%)
Query: 455 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 514
TVDV N N H + + + + V
Sbjct: 69 TVDVTFINTNK-----GFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVP 113
Query: 515 FPYGWTALRF-VADNPGAWAFHCHIEPHFHIGM 546
+ F G + + C I H G
Sbjct: 114 KDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQ 146
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 86.3 bits (213), Expect = 1e-20
Identities = 22/106 (20%), Positives = 29/106 (27%), Gaps = 17/106 (16%)
Query: 452 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDE----------KKF 501
+ TT + N HP HLH F VL R + E
Sbjct: 47 VGTTEIWSIINPTR------GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPP 100
Query: 502 NLKNPPLKNTAVIFPYGWTALRF-VADNPGAWAFHCHIEPHFHIGM 546
K+T + G + +HCHI H M
Sbjct: 101 PPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDM 146
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.8 bits (217), Expect = 2e-20
Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 23/116 (19%)
Query: 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQL----------GTPWADGTAS 105
+ GP I A GDTI V NK + I G+R +
Sbjct: 80 HLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVP 138
Query: 106 ISQCPINPGETYLYRFKVDKAG----------TYFYHGHLGMQR--SAGLYGSLIV 149
S + P ET+ Y + V K Y+ + + GL G + +
Sbjct: 139 PSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 194
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.1 bits (210), Expect = 7e-20
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 22/125 (17%)
Query: 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIR----QLGTPWADGTASISQC--PIN 112
GPT+ A GD + V NK + + IH GI+ G ++D T + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 113 PGETYLYRFKVDK----------AGTYFYHGHLGMQR--SAGLYGSLIV---DVADGEKE 157
PG+ Y Y + + + T+ Y+ ++ + ++GL G L++ +
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175
Query: 158 PFHYD 162
++
Sbjct: 176 QKMFE 180
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.7 bits (196), Expect = 5e-18
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 22/114 (19%)
Query: 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
E + GP + A GD + + N T IH HG++ +
Sbjct: 72 VERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQTESSTV-------- 122
Query: 108 QCPINPGETYLYRFKVDK----------AGTYFYHGHLGMQR--SAGLYGSLIV 149
P PGET Y +K+ + + Y+ + + +GL G LIV
Sbjct: 123 -TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIV 175
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.7 bits (193), Expect = 6e-18
Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 8/123 (6%)
Query: 32 RHYKWEVEYMFWS-PDCKESIVM-GINGQFPG--PTIRARAGDTIAVELTNKLYTEGVVI 87
R + + + D +ES M +NG G P + GD++ L +
Sbjct: 25 RMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEA---- 80
Query: 88 HWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSL 147
HGI G + + P + D GT+ + G+
Sbjct: 81 DVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKY 140
Query: 148 IVD 150
V+
Sbjct: 141 TVN 143
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (121), Expect = 3e-08
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 19/83 (22%)
Query: 468 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527
N +++H + G+ + G TA +FP L D
Sbjct: 77 GNEADVHGIYFSGNTYLWRGERRD-------------------TANLFPQTSLTLHMWPD 117
Query: 528 NPGAWAFHCHIEPHFHIGMGVVL 550
G + C H+ GM
Sbjct: 118 TEGTFNVECLTTDHYTGGMKQKY 140
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 77.4 bits (190), Expect = 4e-17
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 16/98 (16%)
Query: 452 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNT 511
++ + HP+H+HG F +L K+T
Sbjct: 91 KGQYERWVISGVGDMML-----HPFHIHGTQFRILSENGKPPAAH--------RAGWKDT 137
Query: 512 AVIFPYGWT-ALRFVADNP--GAWAFHCHIEPHFHIGM 546
+ ++F D P A+ HCH+ H GM
Sbjct: 138 VKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGM 175
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 37.0 bits (85), Expect = 0.002
Identities = 20/107 (18%), Positives = 27/107 (25%), Gaps = 12/107 (11%)
Query: 55 INGQ-FPG--PTIRARAGDTIAVELTNKLYTEGVVIHWHGI------RQLGTPWADGTAS 105
INGQ F P A G ++ H HG P A
Sbjct: 75 INGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGW 134
Query: 106 ISQCPINPGETYL---YRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
+ + + + K Y H HL G+ V
Sbjct: 135 KDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 73.3 bits (179), Expect = 4e-16
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 29 SKTRHYKWEVEYMFWSPDC---KESIVMGINGQ-FPGPTIRARAGDTIAVELTNKLYT-E 83
K+ +Y + + ING + P +R + + + L N + +
Sbjct: 15 KKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRD 74
Query: 84 GVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGL 143
V+H+HG L + P+ PG K K G + +G + AG+
Sbjct: 75 IHVVHFHGQTLLENGT--QQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGM 132
Query: 144 YGSLIV 149
++
Sbjct: 133 QTPFLI 138
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.1 bits (150), Expect = 3e-12
Identities = 14/83 (16%), Positives = 18/83 (21%), Gaps = 16/83 (19%)
Query: 468 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527
+IH H HG G + P + L A
Sbjct: 70 GGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKAS 113
Query: 528 NPGAWAFHCHIEPHFHIGMGVVL 550
PG W + GM
Sbjct: 114 KPGWWLLDTEVGEIQRAGMQTPF 136
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.1 bits (176), Expect = 1e-15
Identities = 23/110 (20%), Positives = 32/110 (29%), Gaps = 4/110 (3%)
Query: 43 WSPDCKESIVM-GINGQFPG--PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW 99
+ ES M ING+ G + GD + L E + H
Sbjct: 38 DDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMG-NEIDLHTVHFHGHSFQYK 96
Query: 100 ADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
G S I PG G + H H+ AG+ + V
Sbjct: 97 HRGVYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 146
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 3e-11
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 469 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 528
N ++H H HGH F R + IFP + L
Sbjct: 79 NEIDLHTVHFHGHSFQYKHR----------------GVYSSDVFDIFPGTYQTLEMFPRT 122
Query: 529 PGAWAFHCHIEPHFHIGM 546
PG W HCH+ H H GM
Sbjct: 123 PGIWLLHCHVTDHIHAGM 140
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 67.4 bits (164), Expect = 7e-14
Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 35/188 (18%)
Query: 158 PFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 216
P + + +++ D + + + L TLL NG
Sbjct: 3 PKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQ--------- 53
Query: 217 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA-VKNHKMVVVEADGNYV 275
H P RLR+ + SLN A N + V+ +DG +
Sbjct: 54 -------------------HAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLL 94
Query: 276 -QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPA---LTLLNYHPTS 331
+P +V ++ + GE + VL+ N + + ++ V A P ++ P +
Sbjct: 95 PEPVKVSELPVLMGERFEVLVEVNDNKPF-DLVTLPVSQMGMAIAPFDKPHPVMRIQPIA 153
Query: 332 ASKIPLSP 339
S P
Sbjct: 154 ISASGALP 161
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.7 bits (157), Expect = 2e-13
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 8/107 (7%)
Query: 44 SPDCKESIVMGINGQFPG--PTIRARAGDTIAVELTNKLYT-EGVVIHWHGIRQLGTPWA 100
S + S++ +NG G P I A D I+ L E IH++G
Sbjct: 15 SWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQ-----VLE 69
Query: 101 DGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSL 147
IS + + V G + + AG+ +
Sbjct: 70 QNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYI 116
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.6 bits (123), Expect = 9e-09
Identities = 11/81 (13%), Positives = 15/81 (18%), Gaps = 19/81 (23%)
Query: 466 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 525
+ E+ H +G + T
Sbjct: 51 GMSSGPELFSIHFNGQVLEQNHHKIS-------------------AITLVSATSTTANMT 91
Query: 526 ADNPGAWAFHCHIEPHFHIGM 546
G W I HF GM
Sbjct: 92 VSPEGRWTIASLIPRHFQAGM 112
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.3 bits (158), Expect = 2e-13
Identities = 16/105 (15%), Positives = 26/105 (24%), Gaps = 6/105 (5%)
Query: 48 KESIVMGINGQFPG--PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105
+ + + +NG G P + A D + L H G +
Sbjct: 44 ESNRMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV----DVHAAFFHGQALTNKNYR 99
Query: 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150
I + P + G + AGL V
Sbjct: 100 IDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 9e-07
Identities = 12/46 (26%), Positives = 15/46 (32%)
Query: 505 NPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 550
+T +FP VA NPG W C H G+
Sbjct: 96 KNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFF 141
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 54.4 bits (130), Expect = 3e-09
Identities = 22/192 (11%), Positives = 55/192 (28%), Gaps = 40/192 (20%)
Query: 162 DGEFNLLLSDWWH--------RSVHEQEVGLSSRPLRWIG-EPQTLLINGRGQFNCSLAA 212
+ + LL++D S E P +T+L+NG+ +
Sbjct: 6 EYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEP 65
Query: 213 HFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-HKMVVVEAD 271
YR R+ + + + NL++ N + + +D
Sbjct: 66 RK----------------------------YRFRVINASNTRTYNLSLDNGGDFIQIGSD 97
Query: 272 GNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPA-LTLLNYHP 329
G + + +++ + E Y +++ + ++ P ++ +
Sbjct: 98 GGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRV 157
Query: 330 TSASKIPLSPPP 341
T
Sbjct: 158 TKPLAQKDESRK 169
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.8 bits (116), Expect = 2e-08
Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 16/67 (23%)
Query: 110 PINPGETYLYRFKVDKAG----------TYFYHGH--LGMQRSAGLYGSLIVDVADGEKE 157
I P +TY Y + + Y+ +GL G L++ K
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLIC----RKG 57
Query: 158 PFHYDGE 164
+
Sbjct: 58 TLDKETN 64
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Score = 47.0 bits (111), Expect = 2e-07
Identities = 23/98 (23%), Positives = 33/98 (33%), Gaps = 15/98 (15%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
+ N T+ + GD + V + NK + I Q I
Sbjct: 28 IRAFNVLNEPETLVVKKGDAVKVVVENK----SPISEGFSIDA----------FGVQEVI 73
Query: 112 NPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
GET F DKAG + L ++ L G+L V
Sbjct: 74 KAGETKTISFTADKAGAFTIWCQL-HPKNIHLPGTLNV 110
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Score = 47.2 bits (111), Expect = 5e-07
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 5/78 (6%)
Query: 474 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-----LKNTAVIFPYGWTALRFVADN 528
+ + ++ PP L TA++ ++ F
Sbjct: 54 VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPA 113
Query: 529 PGAWAFHCHIEPHFHIGM 546
PG + + C H+ GM
Sbjct: 114 PGTYLYICTFPGHYLAGM 131
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Score = 41.4 bits (96), Expect = 5e-05
Identities = 18/115 (15%), Positives = 32/115 (27%), Gaps = 26/115 (22%)
Query: 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCP------- 110
F ++ A + ++ N+ + H + A +
Sbjct: 28 AFAQTSLSLPANTVVRLDFVNQNN----LGVQHNWVLVNGGDDVAAAVNTAAQNNADALF 83
Query: 111 ---------------INPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVD 150
+N GE+ F+ GTY Y AG+ G+L V
Sbjct: 84 VPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 138
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Score = 44.3 bits (104), Expect = 4e-06
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 24/103 (23%)
Query: 55 INGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPG 114
+ F + + GD + V +TN + + H + G I P
Sbjct: 45 VAPSFSIESFTVKEGDEVTVIVTNLDEID-DLTHGFTMGNYGV----------AMEIGPQ 93
Query: 115 ETYLYRFKVDKAGTYFYH-------GHLGMQRSAGLYGSLIVD 150
T F G Y+Y+ H+ M G ++V+
Sbjct: 94 MTSSVTFVAANPGVYWYYCQWFCHALHMEM------RGRMLVE 130
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Score = 43.9 bits (103), Expect = 5e-06
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 24/108 (22%)
Query: 52 VMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPI 111
+ + Q+ + + GD + V +TN L V H + G I
Sbjct: 41 MTSVAPQYGMTDFKVKEGDEVTVYITN-LDMVEDVTHGFCMVNHGV----------SMEI 89
Query: 112 NPGETYLYRFKVDKAGTYFYH-------GHLGMQRSAGLYGSLIVDVA 152
+P +T F K G Y+Y+ H+ M G ++V+ A
Sbjct: 90 SPQQTASVTFTAGKPGVYWYYCNWFCHALHMEM------VGRMLVEAA 131
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 44.5 bits (105), Expect = 7e-06
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 14/88 (15%)
Query: 466 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALR 523
+ + HL G + GKF NPP + T +I A
Sbjct: 79 VHSQANRDTRPHLIGGHGDYVWA-TGKFR----------NPPDLDQETWLIPGGTAGAAF 127
Query: 524 FVADNPGAWAFHCH-IEPHFHIGMGVVL 550
+ PG +A+ H + F +G
Sbjct: 128 YTFRQPGVYAYVNHNLIEAFELGAAGHF 155
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 25/127 (19%), Positives = 36/127 (28%), Gaps = 19/127 (14%)
Query: 429 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 488
EY V V A T G TV + + N +H+ G F +
Sbjct: 36 EYVVFNGHVGALT--GDNALKAKAGETVRMYVGNGGPNLV-----SSFHVIGEIFDKVYV 88
Query: 489 GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 548
GK + ++ G + F D PG + H G
Sbjct: 89 EGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFR-AFNKGA 136
Query: 549 VLALGVE 555
+ L VE
Sbjct: 137 LGQLKVE 143
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 56 NGQFPGPT----IRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADG----TASIS 107
NG T ++A+AG+T+ + + N H G + +G ++
Sbjct: 41 NGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQ 99
Query: 108 QCPINPGETYLYRFKVDKAGTYFYHGHLGMQR-SAGLYGSLIVD 150
+ G + + FKVD G Y H + + G G L V+
Sbjct: 100 STIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVE 143
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 41.0 bits (96), Expect = 1e-04
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%)
Query: 466 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALR 523
I + HL G + GKF NPP ++ T I A
Sbjct: 79 IHSQANRDTRPHLIGGHGDWVWET-GKFA----------NPPQRDLETWFIRGGSAGAAL 127
Query: 524 FVADNPGAWAFHCH-IEPHFHIGM 546
+ PG +A+ H + F +G
Sbjct: 128 YTFKQPGVYAYLNHNLIEAFELGA 151
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Length = 105 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Score = 36.4 bits (83), Expect = 0.001
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 51 IVMGING---QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+ MG + QF + GDT+ ++ + AD +
Sbjct: 5 VKMGADSGLLQFEPANVTVHPGDTVKWVNNKLPPHN-ILFDDKQVPGASKELADKLSHSQ 63
Query: 108 QCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVD 150
+PGE+Y F AGTY Y+ R AG+ G + V+
Sbjct: 64 L-MFSPGESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Length = 99 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Score = 36.3 bits (83), Expect = 0.001
Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 13/105 (12%)
Query: 51 IVMGING---QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107
+++G + F G+ I + N + +V I G + + S
Sbjct: 3 VLLGADDGSLAFVPSEFSISPGEKIVFK-NNAGFPHNIVFDEDSIPS-GVDASKISMSEE 60
Query: 108 QCPINPGETYLYRFKVDKAGTYFYH--GHLGMQRSAGLYGSLIVD 150
GET+ G Y ++ H + AG+ G + V+
Sbjct: 61 DLLNAKGETFEVAL--SNKGEYSFYCSPH----QGAGMVGKVTVN 99
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Length = 105 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Score = 35.5 bits (81), Expect = 0.002
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 17/107 (15%)
Query: 44 SPDCKESIVMGING-QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADG 102
+ +IV+ I ++ P + + GDT+ H + G
Sbjct: 14 AEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREA--------MPHNVH--FVAGVLG 63
Query: 103 TASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIV 149
A++ + + Y F Y H M G ++V
Sbjct: 64 EAALKGPMMKKEQAYSLTFTEAGTYDYHCTPHPFM------RGKVVV 104
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 580 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.98 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.97 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.97 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.95 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.95 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.93 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.9 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.84 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.83 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.83 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.82 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.81 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.78 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.7 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.69 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.67 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.64 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.6 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.6 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.54 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.53 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.46 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.36 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.32 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.28 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.27 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.27 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.27 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.22 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.21 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.2 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.15 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.08 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.02 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.93 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.92 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.91 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.9 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.84 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.81 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.75 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.7 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.67 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.64 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.62 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.53 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.46 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.44 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.4 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.28 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.27 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.19 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.19 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.18 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.16 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.15 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.15 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.14 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 98.1 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 98.0 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 97.98 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.97 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.91 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.87 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.87 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.86 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.84 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 97.84 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.82 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.81 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.77 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.75 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.73 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.72 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.72 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.65 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.65 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.53 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.42 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.41 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.13 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.11 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 97.06 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 96.95 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 96.9 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 96.84 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.81 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.55 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 96.46 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 96.13 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 96.12 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 96.06 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 96.0 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 95.86 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.75 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 95.51 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.43 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 95.3 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 95.28 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 95.13 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 94.9 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 94.68 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 94.51 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 90.84 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 90.56 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 84.23 | |
| d1ws8a_ | 104 | Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663 | 83.05 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=7.4e-44 Score=336.87 Aligned_cols=212 Identities=68% Similarity=1.255 Sum_probs=186.0
Q ss_pred CCCCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCcee
Q 008038 368 PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 447 (580)
Q Consensus 368 ~p~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 447 (580)
||.+.+|++.+...++..+|..+|+|||++|..|.+|.|.+.+++....|+.+.++..|..+++....+.+...+.|+.+
T Consensus 1 pP~~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v 80 (214)
T d1aoza3 1 PPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGV 80 (214)
T ss_dssp CCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCC
T ss_pred CCCCCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCcee
Confidence 35567899999877777788899999999999999999999998888888888888888777776666666677888999
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|||+|+|.+.+.......||||||||+|+|++++.|.++..+...+++.+|.+|||+.|++++|++|||++|
T Consensus 81 ~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~ad 160 (214)
T d1aoza3 81 YQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD 160 (214)
T ss_dssp EEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC
T ss_pred EEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecC
Confidence 99999999999999976543333457999999999999999999998766778999999999999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecccccccCCCccccccCCCCc-CCCCCCC
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGK-RFMNPKQ 579 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~p~~~~~c~~~~~-~~~~~~~ 579 (580)
|||.|+||||+++|++.|||++|.|++++++.+|++++.||.+.. --.+|+|
T Consensus 161 npG~w~~HCH~~~H~~~GM~~~~~v~~~~~~~~P~~~~~cg~~~~~~~~~~~~ 213 (214)
T d1aoza3 161 NPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 213 (214)
T ss_dssp SCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCSC
T ss_pred CCeeEEEEECcHHHHhCcCcEEEEEccccccCCCccccccccchhhhccCCCC
Confidence 999999999999999999999999999999999999999998877 3334554
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=2.1e-38 Score=276.71 Aligned_cols=127 Identities=80% Similarity=1.428 Sum_probs=122.1
Q ss_pred CceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCcc
Q 008038 29 SKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
+++|+|+|+|++...+|||.++.+|+|||++|||+|++++||+|+|+|+|+|...++++||||+++...+++||+++++|
T Consensus 1 ~~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~ 80 (129)
T d1aoza1 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (129)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CcEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCcccccccccc
Confidence 57899999999999999999999999999999999999999999999999977789999999999988899999999999
Q ss_pred ccCCCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCCC
Q 008038 109 CPINPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADGE 155 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~ 155 (580)
++|+||++++|+|+++++||||||||+..|+.+||+|+|||++++++
T Consensus 81 ~~I~PG~s~~y~f~a~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~~ 127 (129)
T d1aoza1 81 CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK 127 (129)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTC
T ss_pred ceECCCCEEEEEEECCCCCceEEecCCHHHHhCCCEEEEEEcCCCCC
Confidence 99999999999999999999999999999999999999999998763
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=4.6e-38 Score=274.84 Aligned_cols=124 Identities=33% Similarity=0.587 Sum_probs=116.5
Q ss_pred eEEEEEEEEEEEeCCCCc-eeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC----CCceeeeeccccccCCCCCCCCCC
Q 008038 31 TRHYKWEVEYMFWSPDCK-ESIVMGINGQFPGPTIRARAGDTIAVELTNKLY----TEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 31 ~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~----~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+++|+|++++..++|||. .+.+|+|||++|||+||+++||+|+|+|+|++. .+++||||||+++.+++++||+++
T Consensus 2 ~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~~ 81 (136)
T d1v10a1 2 TVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF 81 (136)
T ss_dssp CSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT
T ss_pred EEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCCc
Confidence 578999999999999996 688999999999999999999999999999953 378999999999998899999999
Q ss_pred CccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCCC
Q 008038 106 ISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 154 (580)
++||+|.||++|+|+|++ +++||||||||+..|+.+||+|+|||+++++
T Consensus 82 ~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 82 VNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred cccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 999999999999999999 6899999999999999999999999998765
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=1.7e-36 Score=263.38 Aligned_cols=120 Identities=37% Similarity=0.702 Sum_probs=112.7
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC----CCceeeeeccccccCCCCCCCCCCCcc
Q 008038 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY----TEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~----~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.++|+|++..++|||+++.+++||| +|||+|++++||+|+|+|+|++. .++++|||||+++..++++||+++++|
T Consensus 6 ~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~~ 84 (131)
T d1hfua1 6 VDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (131)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred cEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCccccc
Confidence 4789999999999999999999999 79999999999999999999943 246899999999988899999999999
Q ss_pred ccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCC
Q 008038 109 CPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~ 153 (580)
|+|.||++|+|+|++ +++||||||||+..|+.+||+|+|||++++
T Consensus 85 ~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred ceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 999999999999996 889999999999999999999999999865
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=2.7e-36 Score=262.27 Aligned_cols=121 Identities=40% Similarity=0.715 Sum_probs=114.4
Q ss_pred EEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC----CCceeeeeccccccCCCCCCCCCCCcc
Q 008038 33 HYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY----TEGVVIHWHGIRQLGTPWADGTASISQ 108 (580)
Q Consensus 33 ~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~----~~~~siH~HG~~~~~~~~~DG~~~~~q 108 (580)
.|+|++++..+++||..+.+|+|||++|||+||+++||+|+|+|+|++. ..++++||||+++.+++++||+++++|
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 5899999999999999999999999999999999999999999999943 257899999999998899999999999
Q ss_pred ccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEEcCC
Q 008038 109 CPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 109 ~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~ 153 (580)
|+|.||++++|+|++ +++||||||||+..|+.+||+|+|||++++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 999999999999998 689999999999999999999999999863
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=2.2e-33 Score=254.02 Aligned_cols=128 Identities=35% Similarity=0.613 Sum_probs=116.8
Q ss_pred cCCceEEEEEEEEEEE--eCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMF--WSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGT 103 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~ 103 (580)
..+++|+|+|++++.. +++||.. +.+|+|||++|||+|++++||+|+|+|+|++....++|||||+++.+++++||+
T Consensus 29 ~tg~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~ 108 (162)
T d2q9oa1 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGA 108 (162)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCC
Confidence 4567899999998754 6899865 569999999999999999999999999999667899999999999998999999
Q ss_pred CCCccccC-CCCCeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEcCCC
Q 008038 104 ASISQCPI-NPGETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 104 ~~~~q~~i-~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~ 154 (580)
++++|++| +||++++|+|.++++||||||||+..|+.+||+|+|||+++.+
T Consensus 109 ~~~~~~~i~~pg~~~~y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 109 NGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp BTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred cccccceecCCCCEEEeeecCCCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 99999998 5599999999999999999999999999999999999998754
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3e-32 Score=259.24 Aligned_cols=198 Identities=68% Similarity=1.234 Sum_probs=164.7
Q ss_pred CCCCCcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCC----CcccccccCCCCCCce
Q 008038 158 PFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG----SAEQCKLRGNEQCAPQ 233 (580)
Q Consensus 158 p~~~d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 233 (580)
|+.||+|++|+|+||+|....++...+...+..+.+.++.++|||++..+|+....++.. ....|+ ....+
T Consensus 1 p~~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 75 (209)
T d1aoza2 1 PFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSE-----SCAPY 75 (209)
T ss_dssp SSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCS-----TTSCC
T ss_pred CCCCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCC-----CCCce
Confidence 678999999999999999988887777666655577899999999999999875544321 222333 55567
Q ss_pred EEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecC
Q 008038 234 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 313 (580)
Q Consensus 234 ~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~ 313 (580)
+++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++.|.|+|||||||+|++++.++++||++.....
T Consensus 76 ~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~ 155 (209)
T d1aoza2 76 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA 155 (209)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES
T ss_pred EEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999866778999998877
Q ss_pred CCCCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCcccccccccc
Q 008038 314 RKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 360 (580)
Q Consensus 314 ~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 360 (580)
.+.+.....|+++|.+......+....|..|.|.|+.....+...+.
T Consensus 156 ~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~D~~~a~~f~~~~~ 202 (209)
T d1aoza2 156 RHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRIT 202 (209)
T ss_dssp SCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCC
T ss_pred cCCCccceeEEEEeCCCCcCCCCCCCCCCCCCccchHHHHhhhhhhh
Confidence 77677888999999977666666666778888888776555544443
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=3.9e-33 Score=261.07 Aligned_cols=163 Identities=29% Similarity=0.478 Sum_probs=127.4
Q ss_pred CcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEc
Q 008038 371 NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 450 (580)
Q Consensus 371 ~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (580)
.++.++.|..... . ..|+|||++|..+..|.|.+...+..... ....+..++.+
T Consensus 21 ~aD~~~~~~~~~~--~--~~wtINg~s~~~~~~p~l~~~~~~~~~~~----------------------~~~~~~~v~~~ 74 (200)
T d1hfua3 21 AADVNLRFQLGFS--G--GRFTINGTAYESPSVPTLLQIMSGAQSAN----------------------DLLPAGSVYEL 74 (200)
T ss_dssp CSSEEEECCEEEE--T--TEEEETTBCCCCCSSCHHHHHHTTCCSGG----------------------GSSSTTSEEEE
T ss_pred cCcEEEEEeEeec--c--cEEEECCEeccCCCCChhhhhhcCCcCcc----------------------cccccCceEEe
Confidence 4566666554432 2 37999999999999998877654322111 12334567999
Q ss_pred cCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeC-CCcEEEEEEEecC
Q 008038 451 GLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIF-PYGWTALRFVADN 528 (580)
Q Consensus 451 ~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vp-p~g~v~irf~adn 528 (580)
+.|++++|++.|... + .||||||||+|+||+++++. .+++.+|.||||+.|+ +|+|++|||++||
T Consensus 75 ~~~~~~~~v~~~~~~~~------~Hp~HlHg~~F~vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adn 141 (200)
T d1hfua3 75 PRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDN 141 (200)
T ss_dssp CSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCS
T ss_pred cCCcceEEEEeeccccc------cCceeecCCcEEEEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCC
Confidence 999999999988643 4 89999999999999986543 3567789999999997 4679999999999
Q ss_pred ceeeEEeeecchhhhcccEEEEecccccc---cCCCccc-cccCCCCc
Q 008038 529 PGAWAFHCHIEPHFHIGMGVVLALGVETV---GNIPNQA-LACGLTGK 572 (580)
Q Consensus 529 pG~w~~HCHil~H~d~GM~~~~~~~~~~~---~~~p~~~-~~c~~~~~ 572 (580)
||.|+|||||++|++.|||++|.|+++++ ..+|++. +.|+.|..
T Consensus 142 pG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~ 189 (200)
T d1hfua3 142 PGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDD 189 (200)
T ss_dssp CEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHT
T ss_pred CeeeEEEeCCChHHhCCCcEEEEEcCCCcccccCCChhhhcccccccc
Confidence 99999999999999999999999988655 4567665 67998865
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=3.3e-33 Score=245.63 Aligned_cols=120 Identities=26% Similarity=0.451 Sum_probs=109.6
Q ss_pred CCceEEEEEEEEEEEeCCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCc
Q 008038 28 GSKTRHYKWEVEYMFWSPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASIS 107 (580)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~ 107 (580)
....++|+|+++......+|....+|+|||++|||+|++++||+|+|+++|+ ++++++|||||+++. +.+||++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~-l~~~~siH~HG~~~~--~~~dG~~--- 85 (140)
T d1kv7a1 12 TDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQ-LTEETTLHWHGLEVP--GEVDGGP--- 85 (140)
T ss_dssp CCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEEC-SSSCBCCEEETCCCC--GGGSCCT---
T ss_pred CCCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeC-ccccccEeeeeeecC--CccCCCc---
Confidence 3456789999999999999999999999999999999999999999999999 789999999999885 5789986
Q ss_pred cccCCCCCeEEEEEEc-CCCcceeeecCc----chhhccccEEEEEEEcCC
Q 008038 108 QCPINPGETYLYRFKV-DKAGTYFYHGHL----GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 108 q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~ 153 (580)
+++|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++
T Consensus 86 ~~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 86 QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred cceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 7899999999999999 558999999994 578999999999999864
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.97 E-value=2.3e-32 Score=255.85 Aligned_cols=165 Identities=31% Similarity=0.538 Sum_probs=127.9
Q ss_pred CcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEc
Q 008038 371 NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 450 (580)
Q Consensus 371 ~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (580)
..+.++.+.+..+ + ..|+|||++|..|..|.|.+...+....+ ..+.+..++.+
T Consensus 21 ~~d~~~~l~~~~~---~-~~~~iNg~sf~~p~~p~l~~~~~~~~~~~----------------------~~~~~~~v~~~ 74 (199)
T d1gyca3 21 GVDKALNLAFNFN---G-TNFFINNASFTPPTVPVLLQILSGAQTAQ----------------------DLLPAGSVYPL 74 (199)
T ss_dssp CSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT----------------------TSSSTTSEEEE
T ss_pred CccEEEEEEEecc---c-ceEEECCEecCCCCcchHHHHhcCCCCcc----------------------cccccCceEEe
Confidence 3456555554432 2 36999999999999898876653322111 23345567899
Q ss_pred cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEe---CCCcEEEEEEEec
Q 008038 451 GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI---FPYGWTALRFVAD 527 (580)
Q Consensus 451 ~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~v---pp~g~v~irf~ad 527 (580)
+.+++++++++|.... ....||||||||+|+|++++++. .+++.+|.+|||+.+ ++++|++|||++|
T Consensus 75 ~~~~~~eiv~~~~~~~---~~~~HP~HlHG~~F~vv~~~~~~-------~~~~~~p~~rdt~~~~~~~~g~~~~irf~ad 144 (199)
T d1gyca3 75 PAHSTIEITLPATALA---PGAPHPFHLHGHAFAVVRSAGST-------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTD 144 (199)
T ss_dssp CTTCEEEEEEECCTTS---CSCSCEEEETTCCEEEEECTTCC-------CCCSSSCCEESEEECCCGGGTCEEEEEEECC
T ss_pred ccCceeEEEeeccccc---CCCceeeeecCCcEEEEeecCCC-------ccCccCcccccceeeeccCCCcEEEEEEECC
Confidence 9999999999986433 12379999999999999986653 256778999999877 7999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecccccc---cCCCcccc-ccCCCC
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGVETV---GNIPNQAL-ACGLTG 571 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~~~~---~~~p~~~~-~c~~~~ 571 (580)
|||.|+|||||++|++.|||++|.++++++ ..+|+.+. .|+.|.
T Consensus 145 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~p~~~~~~C~~~~ 192 (199)
T d1gyca3 145 NPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWSDLCPIYD 192 (199)
T ss_dssp SCEEEEEEESSHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCeeEEEEcCchhhHhccCcEEEEEcCCcccccCCCCHHHHhhhhhhc
Confidence 999999999999999999999999988765 46777775 798874
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=2.5e-32 Score=254.87 Aligned_cols=163 Identities=29% Similarity=0.457 Sum_probs=125.4
Q ss_pred CCcceEEEEEeeeeecCCeEEEEEcceeccCCCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEE
Q 008038 370 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 449 (580)
Q Consensus 370 ~~~~r~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (580)
..+++++.+.+..+ .+...|+|||++|..+..|.|.....+..... .....+.++.
T Consensus 20 ~~~d~~~~~~~~~~--~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~----------------------~~~~~~~~~~ 75 (190)
T d1v10a3 20 GGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTNPN----------------------DLLPGGAVIS 75 (190)
T ss_dssp TCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGG----------------------GSSSTTTEEE
T ss_pred CCCCEEEEEEEEec--CCEeEEEECCEecCCCCCchHHHhhcCCcccc----------------------cccccceeEE
Confidence 34677776665442 34568999999999999998877664322100 1122344688
Q ss_pred ccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCc-EEEEEEEecC
Q 008038 450 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG-WTALRFVADN 528 (580)
Q Consensus 450 ~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g-~v~irf~adn 528 (580)
+..++++++++.|. . .||||||||+|+|++++++. .+++.+|.||||+.|+++| +++|||++||
T Consensus 76 ~~~~~~~~i~~~~~--~------~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adn 140 (190)
T d1v10a3 76 LPANQVIEISIPGG--G------NHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDN 140 (190)
T ss_dssp ECTTCEEEEEEECC--B------SCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCS
T ss_pred ccCccEEEEEeccC--c------cccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCC
Confidence 89999999988884 3 79999999999999986432 3567789999999999876 8889999999
Q ss_pred ceeeEEeeecchhhhcccEEEEecccccccC---CCccc-cccCCCC
Q 008038 529 PGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQA-LACGLTG 571 (580)
Q Consensus 529 pG~w~~HCHil~H~d~GM~~~~~~~~~~~~~---~p~~~-~~c~~~~ 571 (580)
||.|+|||||++|++.|||++|.+++++++. +|... ..|..|.
T Consensus 141 pG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 187 (190)
T d1v10a3 141 PGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYN 187 (190)
T ss_dssp CEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHT
T ss_pred CeeEEEecCchhhhhCCCcEEEEECCCCCCccCCCCHHHHhhhhhcc
Confidence 9999999999999999999999999887754 34333 5677664
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=1.6e-31 Score=253.32 Aligned_cols=173 Identities=27% Similarity=0.442 Sum_probs=122.1
Q ss_pred cceEEEEEeeeeecCCeEEEEEcceeccC-CCCCcchhhhccCCccCCCCCCCCCCCCCcccCCCCCCCCccCCceeEEc
Q 008038 372 FHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 450 (580)
Q Consensus 372 ~~r~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (580)
.++++.+..... ....+.|.|||.+|.. +..|.|.....+-. .+ + ....+..+
T Consensus 12 ~d~t~~~~~~~~-g~~~~~w~iNg~s~~~d~~~P~L~~~~~~~~-~~-----~-------------------~~~~~~~~ 65 (216)
T d2q9oa3 12 PDNTLPVALDLT-GTPLFVWKVNGSDINVDWGKPIIDYILTGNT-SY-----P-------------------VSDNIVQV 65 (216)
T ss_dssp GGGEEEEEEECS-SSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-CC-----C-------------------GGGCEEEE
T ss_pred CCccEEEEEEeC-CCcEEEEEECCEecccCCCCCChhhhhcCCc-cc-----c-------------------cccceeec
Confidence 466666655432 1234689999999854 57777765542210 00 0 01112444
Q ss_pred cC-CcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc----------ccccccCCCCCCccceEEeCCCcE
Q 008038 451 GL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK----------EDEKKFNLKNPPLKNTAVIFPYGW 519 (580)
Q Consensus 451 ~~-G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~----------~~~~~~~~~~p~~rDTv~vpp~g~ 519 (580)
.. +.+..+++++.... .....||||||||+|+||+++.+.+.. .....+++.+|.+|||+.|++++|
T Consensus 66 ~~~~~~~~~~i~~~~~n--~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~ 143 (216)
T d2q9oa3 66 DAVDQWTYWLIENDPEG--PFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGW 143 (216)
T ss_dssp CCSSCEEEEEEEECTTS--SCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSE
T ss_pred cccccceeEEEEeccCC--ccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCE
Confidence 43 34444444442111 122379999999999999998876654 123567899999999999999999
Q ss_pred EEEEEEecCceeeEEeeecchhhhcccEEEEecccccccCC-----Cc-cccccCCCCc
Q 008038 520 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----PN-QALACGLTGK 572 (580)
Q Consensus 520 v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~~~~~~~-----p~-~~~~c~~~~~ 572 (580)
++|||++||||.|+|||||++|++.|||++|.+.+++++.. |. ....|+.|+.
T Consensus 144 ~~ir~~adnpG~Wl~HCHi~~H~~~GM~~~~~~~p~~~~~~~~~~~~~~~~~~C~~w~~ 202 (216)
T d2q9oa3 144 LLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEWRA 202 (216)
T ss_dssp EEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCeEEEEEccCCcccccCCeEEEEEcchhhhhcccCCCchhhhccChhhcc
Confidence 99999999999999999999999999999999999877653 33 3579998875
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=6.9e-31 Score=236.33 Aligned_cols=123 Identities=29% Similarity=0.438 Sum_probs=103.1
Q ss_pred cCCceEEEEEEEEEEEeCCC--CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWSPD--CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
+.+++++|+|++++..+..+ |....+|+|||++|||+||+++||+|+|+|+|++ + ++||||++..+ .+++++
T Consensus 28 ~g~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~-~---~~h~h~ih~hg--~~~~~~ 101 (159)
T d1oe2a1 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA-T---NAMPHNVEFHG--ATGALG 101 (159)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT-T---CCSCBCCEETT--SCSGGG
T ss_pred CCCeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCC-c---cccccceeecc--ccCCCC
Confidence 45678999999999877654 8899999999999999999999999999999994 3 34444444432 245556
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecC----cchhhccccEEEEEEEcCCCC
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGH----LGMQRSAGLYGSLIVDVADGE 155 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H----~~~~~~~Gl~G~liV~~~~~~ 155 (580)
+.++++|.||++++|+|+++++|||||||| +..|+.+||+|+|||++++..
T Consensus 102 g~~~~~I~PG~t~ty~f~a~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 102 GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred CcccccCCCCCeEEEEEEcCCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 667899999999999999999999999999 457899999999999987764
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=6e-31 Score=236.06 Aligned_cols=100 Identities=21% Similarity=0.171 Sum_probs=84.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc----------ccccccCCCCCCccceEEeCCC
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK----------EDEKKFNLKNPPLKNTAVIFPY 517 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~----------~~~~~~~~~~p~~rDTv~vpp~ 517 (580)
.+++.|++++|.|.|.+.+ .|||||||++||||+++.+.+.. .......+.++.||||+.|+|+
T Consensus 43 ~~~~~G~~e~W~i~N~~~~------~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg 116 (154)
T d1gska3 43 ETPKVGTTEIWSIINPTRG------THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAG 116 (154)
T ss_dssp BCCBTTCEEEEEEEECSSS------CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTT
T ss_pred cccCCCCEEEEEEEeCCCC------CCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCC
Confidence 5568999999999998887 89999999999999987643322 0112234456789999999999
Q ss_pred cEEEEEEE-ecCceeeEEeeecchhhhcccEEEEecc
Q 008038 518 GWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 518 g~v~irf~-adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
++++|||+ +||||.|+|||||++|||.|||+.|.+.
T Consensus 117 ~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 117 EVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp EEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred CEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 99999998 6899999999999999999999999874
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=1.7e-29 Score=231.19 Aligned_cols=149 Identities=22% Similarity=0.372 Sum_probs=124.3
Q ss_pred CCcce-EEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEec
Q 008038 161 YDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 239 (580)
Q Consensus 161 ~d~e~-~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (580)
||.|. +|+|+||+|+...+......... .+.++.+||||++...|.. ......+++++
T Consensus 1 YD~D~~vi~lsDW~h~~~~~~~~~~~~~~---~p~~d~~LINGkg~~~~~~------------------~~~~~~~~v~~ 59 (181)
T d2q9oa2 1 YDIDLGVFPITDYYYRAADDLVHFTQNNA---PPFSDNVLINGTAVNPNTG------------------EGQYANVTLTP 59 (181)
T ss_dssp CSEEEEEEEEEEECSSCHHHHHHHHTTSC---CCCBSEEEETTBCBCTTTC------------------CBCCCEEEECT
T ss_pred CCccCeeEEEEecCCCCHHHHHhhcccCC---CCCcceEEECCcCCCCCCC------------------CCcceEEEECC
Confidence 56666 89999999998877665444332 3468999999999885543 22345899999
Q ss_pred CCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC---
Q 008038 240 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP--- 316 (580)
Q Consensus 240 Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~--- 316 (580)
|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++.|++||||||+|++++ ++|+|||++.....+.
T Consensus 60 g~~~rlR~iN~~~~~~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~-~~~~Y~ir~~~~~~~~~~~ 138 (181)
T d2q9oa2 60 GKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGG 138 (181)
T ss_dssp TCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCC
T ss_pred CCEEEEEEecccCCccEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCC-CCccEEEEEeccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999987 6789999998755442
Q ss_pred -CCCCceEEEEecCCC
Q 008038 317 -ATPPALTLLNYHPTS 331 (580)
Q Consensus 317 -~~~~~~ail~y~~~~ 331 (580)
......|||+|++..
T Consensus 139 ~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 139 SLNPHPAAIFHYAGAP 154 (181)
T ss_dssp BSSSCCEEEEEETTSC
T ss_pred CCCCceEEEEEECCCC
Confidence 245678999998644
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=1.3e-29 Score=229.34 Aligned_cols=150 Identities=29% Similarity=0.502 Sum_probs=122.3
Q ss_pred CCC-cceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEe
Q 008038 160 HYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 238 (580)
Q Consensus 160 ~~d-~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (580)
+|| .|.+|+|+||+++....+..... ..++.++.++|||++...|.. .....++++++
T Consensus 2 D~Dd~e~vi~lsDW~h~~~~~l~~~~~----~~~~~pd~~liNGkg~~~~~~-----------------~~~~~~~~~v~ 60 (168)
T d1v10a2 2 DVDDASTVITIADWYHSLSTVLFPNPN----KAPPAPDTTLINGLGRNSANP-----------------SAGQLAVVSVQ 60 (168)
T ss_dssp SBCSGGGEEEEEEECSSCCC-----------CCCSCCSEEEETTBCCCSSCG-----------------GGSCCCEEEEC
T ss_pred CCCCCccEEEEEECCCCCHHHHHhccC----CCCCCCceeeecCCCCcCCCC-----------------cCCCceEEEEC
Confidence 454 68899999999988766543322 225689999999999886542 12345689999
Q ss_pred cCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCCC-
Q 008038 239 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA- 317 (580)
Q Consensus 239 ~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~~- 317 (580)
+|++|||||||+|+...+.|+|+||+|+|||+||.+++|+.++++.|+|||||||+|++++ ++|+||||+.....+..
T Consensus 61 ~g~~~rlRlina~~~~~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~-~~~~y~ira~~~~~~~~~ 139 (168)
T d1v10a2 61 SGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGF 139 (168)
T ss_dssp TTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSC
T ss_pred CCCEEEEEEEecccCceEEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCC-CCCcEEEEEEeccCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999987 67899999987766642
Q ss_pred -CCCceEEEEecCCC
Q 008038 318 -TPPALTLLNYHPTS 331 (580)
Q Consensus 318 -~~~~~ail~y~~~~ 331 (580)
.....|+|+|++..
T Consensus 140 ~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 140 TGGINSAIFRYQGAA 154 (168)
T ss_dssp GGGTTEEEEEETTCC
T ss_pred CCCceEEEEEECCCC
Confidence 34557999998654
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=2.8e-30 Score=231.99 Aligned_cols=122 Identities=25% Similarity=0.400 Sum_probs=105.9
Q ss_pred cCCceEEEEEEEEEEEe--CCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFW--SPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA 104 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~--~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~ 104 (580)
..+++++|+|++++..+ ..+|....+|+|||++|||+|++++||+|+|+|+|+ ..++||||+++.+ .+|+.+
T Consensus 27 ~~~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~----~~~~~~Hg~~~h~--~~~~~~ 100 (157)
T d2bw4a1 27 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP----DTNTLLHNIDFHA--ATGALG 100 (157)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----TTCCSCBCCEETT--SCSGGG
T ss_pred CCCeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC----CCCcceEeeeecc--cCCCcC
Confidence 45678999999997665 468999999999999999999999999999999997 3577888888765 345555
Q ss_pred CCccccCCCCCeEEEEEEcCCCcceeeecC----cchhhccccEEEEEEEcCCC
Q 008038 105 SISQCPINPGETYLYRFKVDKAGTYFYHGH----LGMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 105 ~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H----~~~~~~~Gl~G~liV~~~~~ 154 (580)
+.++++|.||++++|+|+++++|||||||| +..|+.+||+|+|||++++.
T Consensus 101 ~~~~~~i~PGet~ty~f~a~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e~ 154 (157)
T d2bw4a1 101 GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDG 154 (157)
T ss_dssp GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBC
T ss_pred CcceeeECcCCEEeEEEECCCCccceEEECCCCchHHHHhCCCEEEEEEeCCCC
Confidence 666788999999999999999999999999 45789999999999998653
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.96 E-value=2.8e-29 Score=228.32 Aligned_cols=143 Identities=29% Similarity=0.578 Sum_probs=120.3
Q ss_pred CcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCC
Q 008038 162 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 241 (580)
Q Consensus 162 d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge 241 (580)
|.|++|+|+||+++...++. ....++..+|||++...|.. ....++++|++|+
T Consensus 10 D~e~vl~l~DW~h~~~~~~~---------~~~~pd~~liNG~g~~~~~~------------------~~~~~~~~v~~g~ 62 (172)
T d1hfua2 10 DENTIITLADWYHIPAPSIQ---------GAAQPDATLINGKGRYVGGP------------------AAELSIVNVEQGK 62 (172)
T ss_dssp STTSEEEEEEECSSCGGGCC------------CCSEEEETTBCCBTTCC------------------CCCCCEEEECTTC
T ss_pred CCeEEEEEEECCCCChHHhh---------ccCCCCcEEECccCccCCCC------------------CCCceEEEECCCC
Confidence 58899999999998765432 14468999999999874432 3345689999999
Q ss_pred EEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-----
Q 008038 242 TYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----- 316 (580)
Q Consensus 242 ~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~----- 316 (580)
+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+++++|.|++||||||+|++++ ++|+|||++.....+.
T Consensus 63 ~~rlR~iN~~~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~-~~~~Y~ira~~~~~~~~~~~~ 141 (172)
T d1hfua2 63 KYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGT 141 (172)
T ss_dssp EEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGC
T ss_pred EEEEEEeeecCCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCC-CCCcEEEEEEeccCcccccCc
Confidence 9999999999999999999999999999999999999999999999999999999987 5789999998766553
Q ss_pred -CCCCceEEEEecCCCC
Q 008038 317 -ATPPALTLLNYHPTSA 332 (580)
Q Consensus 317 -~~~~~~ail~y~~~~~ 332 (580)
......|+|+|+++..
T Consensus 142 ~~~~~~~aiL~Y~g~~~ 158 (172)
T d1hfua2 142 FANGVNSAILRYAGAAN 158 (172)
T ss_dssp CGGGTTEEEEEETTSCS
T ss_pred CCCceEEEEEEECCCCC
Confidence 1345689999996543
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=5.7e-29 Score=222.62 Aligned_cols=121 Identities=24% Similarity=0.353 Sum_probs=100.7
Q ss_pred cCCceEEEEEEEEEEEeC-CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS-PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
+.+.+++|+|++++..+. .+|....+|+|||++|||+|++++||+|+|+|+|+ .+ .+..|+||++. ....||.+.
T Consensus 26 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~-~~-~~~~H~~~~h~--~~~~~~~~~ 101 (153)
T d1mzya1 26 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP-PE-NTMPHNIDFHA--ATGALGGGG 101 (153)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC-TT-CCSCBCCEETT--SCSGGGGGG
T ss_pred CCCeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcC-CC-CceEccCcccc--CCcCCCCCc
Confidence 455689999999999998 57899999999999999999999999999999998 33 34455555543 234555443
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCc-----chhhccccEEEEEEEcCC
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHL-----GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-----~~~~~~Gl~G~liV~~~~ 153 (580)
+.+|.||++++|+|+++++||||||||. ..|+.+||+|+|||++++
T Consensus 102 --~~~i~PG~t~ty~f~a~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 102 --LTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp --GCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred --cccccCCCEEEEEEEcCCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 4689999999999999999999999994 358899999999999875
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.95 E-value=7.3e-28 Score=218.20 Aligned_cols=146 Identities=29% Similarity=0.492 Sum_probs=120.3
Q ss_pred CCCC-cceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEE
Q 008038 159 FHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHV 237 (580)
Q Consensus 159 ~~~d-~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (580)
+++| .|.+|+|+||++..... ...++..++..+|||++..+|.. ....+.++|
T Consensus 7 YD~D~ee~vi~lsDWyh~~~~~--------~~~~~~~~d~~liNG~g~~~~~~------------------~~~~~~~~v 60 (170)
T d1gyca2 7 YDVDNESTVITLTDWYHTAARL--------GPRFPLGADATLINGLGRSASTP------------------TAALAVINV 60 (170)
T ss_dssp CSBCSGGGEEEEEEECSSCTTT--------SCSSCSSCSEEEETTBCCBTTCT------------------TSCCCEEEE
T ss_pred CCCCCCceEEEEeecCCChhhh--------cccCCCcCCcccccCccccCCCC------------------CCCceEEEE
Confidence 4555 55799999999976421 11124568899999998874432 334568999
Q ss_pred ecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEeecCCCC-
Q 008038 238 QPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP- 316 (580)
Q Consensus 238 ~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~~~~~~~- 316 (580)
++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++ ++|+|||++.....+.
T Consensus 61 ~~g~~~rlRlIN~~~~~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~-~~~~y~ira~~~~~~~~ 139 (170)
T d1gyca2 61 QHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQ-TVGNYWIRANPNFGTVG 139 (170)
T ss_dssp CTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCS
T ss_pred CCCCEEEEEEeecCCCceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCC-CCCcEEEEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999987 6789999998766654
Q ss_pred -CCCCceEEEEecCCC
Q 008038 317 -ATPPALTLLNYHPTS 331 (580)
Q Consensus 317 -~~~~~~ail~y~~~~ 331 (580)
......|+|+|+++.
T Consensus 140 ~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 140 FAGGINSAILRYQGAP 155 (170)
T ss_dssp CGGGTTEEEEEETTSC
T ss_pred cCCCeeEEEEEECCCC
Confidence 234568999998654
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.95 E-value=9.6e-29 Score=228.07 Aligned_cols=126 Identities=25% Similarity=0.358 Sum_probs=105.9
Q ss_pred cCCceEEEEEEEEEEEe--CCCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCC---------------------CC
Q 008038 27 YGSKTRHYKWEVEYMFW--SPDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLY---------------------TE 83 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~--~~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~---------------------~~ 83 (580)
.....+.|+|+++.... .+|+..+.+|+|||++|||+|+|++||+|+|+++|+|. ..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~ 99 (181)
T d1gska1 20 QSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEV 99 (181)
T ss_dssp ECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSC
T ss_pred cCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCC
Confidence 34567889999987764 47889999999999999999999999999999999963 23
Q ss_pred ceeeeeccccccCCCCCCCCCC--Cccc---cCCCCCeEEEEEEc-CCCcceeeecCc----chhhccccEEEEEEEcCC
Q 008038 84 GVVIHWHGIRQLGTPWADGTAS--ISQC---PINPGETYLYRFKV-DKAGTYFYHGHL----GMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 84 ~~siH~HG~~~~~~~~~DG~~~--~~q~---~i~pG~~~~y~f~~-~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~ 153 (580)
+++|||||+++. +.+||.+. ++++ ++.+|++++|+|.+ +++||||||||. +.|+.+||+|+|||++++
T Consensus 100 ~t~iH~HG~~~~--~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~ 177 (181)
T d1gska1 100 KTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 177 (181)
T ss_dssp CBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred cceeeeeccccC--CccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCcc
Confidence 689999999885 67899874 4444 45556888999999 568999999994 579999999999999875
Q ss_pred C
Q 008038 154 G 154 (580)
Q Consensus 154 ~ 154 (580)
+
T Consensus 178 ~ 178 (181)
T d1gska1 178 E 178 (181)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.95 E-value=2.2e-28 Score=218.80 Aligned_cols=122 Identities=28% Similarity=0.403 Sum_probs=102.7
Q ss_pred cCCceEEEEEEEEEEEeC-CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC
Q 008038 27 YGSKTRHYKWEVEYMFWS-PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS 105 (580)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~ 105 (580)
..+.+.+++|++.+..+. .+|..+.+|+|||++|||+|++++||+|+|+|+|+ . .++||||+++.+..+.||.
T Consensus 22 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~-~---~~~~~H~~~~h~~~~~~~~-- 95 (151)
T d1kbva1 22 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNN-P---SSTVPHNVDFHAATGQGGG-- 95 (151)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEEC-T---TCSSCBCCEETTCCSGGGG--
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcC-C---CCceeeeccccccccCCCC--
Confidence 345667889988887776 57999999999999999999999999999999998 3 3467777766654555554
Q ss_pred CccccCCCCCeEEEEEEcCCCcceeeecCc---chhhccccEEEEEEEcCCC
Q 008038 106 ISQCPINPGETYLYRFKVDKAGTYFYHGHL---GMQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 106 ~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~~~~~Gl~G~liV~~~~~ 154 (580)
.+++.|.||++++|+|+++++||||||||. ..|+.+||+|+|||++++.
T Consensus 96 ~~~~~i~PG~t~~y~f~a~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 96 AAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp TTTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC
T ss_pred cceeeeCCCCEEEEEEeCCCCeEEEEECCCCChHHHHhCCCEEEEEEECCCC
Confidence 457889999999999999999999999994 4689999999999998754
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2e-26 Score=210.36 Aligned_cols=91 Identities=20% Similarity=0.359 Sum_probs=77.6
Q ss_pred EEccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcE-EEEEEE
Q 008038 448 YMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGW-TALRFV 525 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~-v~irf~ 525 (580)
+.++.|++|+|+|.|.+. + .|||||||+.|+|++++.+... ..++.|||||.|+++++ ++|+|+
T Consensus 87 ~~~~~G~~erw~i~N~~~~~------~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~ 152 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFN 152 (181)
T ss_dssp EECCSSSCEEEEEECTTCCC------CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCC
T ss_pred eEeCCCCEEEEEEEeCCCCC------ccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEE
Confidence 889999999999999774 4 7999999999999998665432 23468999999998764 578887
Q ss_pred ec--CceeeEEeeecchhhhcccEEEEec
Q 008038 526 AD--NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 526 ad--npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
++ ++|.|+|||||++|+|.|||+.|.|
T Consensus 153 ~~~~~~G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 153 HDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp SCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eeCCCCCeEEEeCChHHHHhCCCCEEEEC
Confidence 65 5799999999999999999999975
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.90 E-value=1.9e-24 Score=197.16 Aligned_cols=125 Identities=24% Similarity=0.458 Sum_probs=96.8
Q ss_pred CceEEEEEEEEEEEeC--CCCc------------eeEEEEEcCC------------CCCCeEEecCCCEEEEEEEeCCCC
Q 008038 29 SKTRHYKWEVEYMFWS--PDCK------------ESIVMGINGQ------------FPGPTIRARAGDTIAVELTNKLYT 82 (580)
Q Consensus 29 ~~~~~~~l~~~~~~~~--~~g~------------~~~~~~~NG~------------~pgP~l~v~~Gd~v~v~v~N~l~~ 82 (580)
+++|+|-+.+++..+. |.+. ......|+++ +|||+||+++||+|+|+|+|. +.
T Consensus 1 ~~~r~y~iaa~e~~WdY~P~~~~~~~~~~g~~ykK~~y~eyd~tf~~~~~~~~~~g~~GP~Ira~~GD~i~V~f~N~-~~ 79 (180)
T d1sdda1 1 AKLRQFYVAAQSIRWNYRPESTHLSSKPFETSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNK-AH 79 (180)
T ss_dssp CCCCEECCEEEEEEEC--------------CCEEEEEEECCCTTTCCCCCCCSSCCSCCCCEEEETTCEEEEEEEEC-SS
T ss_pred CceEEEEEEEEEEeeccCCCcccccCccCCceEEEEEEEEeccceeeccCCCcccCCcCCeEEEECCcEEeeEEEeC-CC
Confidence 4677888888777643 4331 1123456665 699999999999999999999 78
Q ss_pred Cceeeeecccccc----CCCCCCCCCCCcc--ccCCCCCeEEEEEEcC----------CCcceeeecCcc--hhhccccE
Q 008038 83 EGVVIHWHGIRQL----GTPWADGTASISQ--CPINPGETYLYRFKVD----------KAGTYFYHGHLG--MQRSAGLY 144 (580)
Q Consensus 83 ~~~siH~HG~~~~----~~~~~DG~~~~~q--~~i~pG~~~~y~f~~~----------~~Gt~wYH~H~~--~~~~~Gl~ 144 (580)
.++||||||+... +..+.||++..++ ++|+||++++|+|.+. ++||||||||+. .|..+||+
T Consensus 80 ~~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~ 159 (180)
T d1sdda1 80 KPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLI 159 (180)
T ss_dssp SCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCC
T ss_pred CCccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCCCCCEEEEEecCCCcHHHhhCCce
Confidence 9999999999864 2345677765544 4899999999999993 358999999964 48899999
Q ss_pred EEEEEEcCCC
Q 008038 145 GSLIVDVADG 154 (580)
Q Consensus 145 G~liV~~~~~ 154 (580)
|+|||+++.+
T Consensus 160 G~lIV~~~g~ 169 (180)
T d1sdda1 160 GPLLICKKGT 169 (180)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEccCCC
Confidence 9999998765
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=4.8e-23 Score=183.80 Aligned_cols=87 Identities=28% Similarity=0.531 Sum_probs=76.4
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.|.|.+.. ...||||+||+.|.+...+ +.++||+.|+||++++++|+++
T Consensus 62 l~v~~Gd~v~~~l~n~g~~----~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~ 121 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNE----IDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPR 121 (149)
T ss_dssp CEEETTCEEEEEEEECCST----TCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCC
T ss_pred eEEEcCCcEEEEEEecCCC----CCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCC
Confidence 7788999999999996532 2279999999999886532 3579999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+||.|+||||++.|++.|||+.|.|-+
T Consensus 122 ~pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 122 TPGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp SCEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CCeeEEEEcCCHHHHhccCceEEEEec
Confidence 999999999999999999999997753
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.4e-22 Score=188.43 Aligned_cols=96 Identities=27% Similarity=0.354 Sum_probs=77.7
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccC----C------CCCCCCCCCccccCCCCCeEEEEEEc-CCC
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLG----T------PWADGTASISQCPINPGETYLYRFKV-DKA 126 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~----~------~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~ 126 (580)
.++||+|++++||+|+|+|+|+ +..++||||||+.... . .+.++....++|+|+||++++|+|++ +..
T Consensus 82 G~lGP~Ira~~GD~v~V~~~N~-~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~ 160 (207)
T d2j5wa3 82 GILGPVIWAEVGDTIRVTFHNK-GAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEV 160 (207)
T ss_dssp TTSCCCEEEETTEEEEEEEEEC-SSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGG
T ss_pred CCcCceEEEECCCEEEEEEEEC-CCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCC
Confidence 3889999999999999999999 7899999999998631 1 12233445678999999999999999 444
Q ss_pred c---------ceeeecCcc--hhhccccEEEEEEEcCCC
Q 008038 127 G---------TYFYHGHLG--MQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 127 G---------t~wYH~H~~--~~~~~Gl~G~liV~~~~~ 154 (580)
| |||||||+. .|+.+||+|+|||+.+.+
T Consensus 161 gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 161 GPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp SCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 4 999999965 466899999999998755
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=3.8e-22 Score=184.47 Aligned_cols=95 Identities=33% Similarity=0.540 Sum_probs=81.1
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccC----CCCCCCCC--CCccccCCCCCeEEEEEEcCC-------
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLG----TPWADGTA--SISQCPINPGETYLYRFKVDK------- 125 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~----~~~~DG~~--~~~q~~i~pG~~~~y~f~~~~------- 125 (580)
+|||+|++++||+|+|+|+|+ +..+++|||||+.... ....||+. +.++++|+||++++|+|++.+
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~-~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~ 151 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNL-ASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEG 151 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEE-SSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTT
T ss_pred CcCCeEEEECCcEEEEEEEeC-CCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccC
Confidence 799999999999999999999 7899999999998742 33455554 346889999999999999943
Q ss_pred ---CcceeeecCcc--hhhccccEEEEEEEcCCC
Q 008038 126 ---AGTYFYHGHLG--MQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 126 ---~Gt~wYH~H~~--~~~~~Gl~G~liV~~~~~ 154 (580)
+||||||||+. .|+.+||+|+|||+++..
T Consensus 152 d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 152 DGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp SCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 57999999964 488899999999998754
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.84 E-value=1.9e-21 Score=171.14 Aligned_cols=85 Identities=20% Similarity=0.297 Sum_probs=74.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|+|.|.+.. ...||+|+||+.|.+.+.+ +.++||+.|+||++.+++|+++
T Consensus 54 ~~v~~gd~v~~~l~n~g~~----~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~ 113 (139)
T d1sddb2 54 LRMYEQEWVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKAS 113 (139)
T ss_dssp CEEETTCEEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECC
T ss_pred cccccCCcEEEEEEecCCC----CCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecC
Confidence 5677899999999996532 2379999999999876532 3578999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEec
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+||.|+||||++.|++.||++.|.|
T Consensus 114 ~pG~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 114 KPGWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp SSEEEEEECCCHHHHTTTCEEEEEE
T ss_pred CCEeEEEEeCCHHHHhccCcEEEEE
Confidence 9999999999999999999999865
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.4e-21 Score=173.20 Aligned_cols=83 Identities=20% Similarity=0.328 Sum_probs=74.1
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|+|.|.+.. ...||||+||+.|++.. .++||+.|+||++.+++|+|+
T Consensus 61 l~v~~Gd~v~~~l~n~g~~----~~~h~iH~hG~~f~~~~-------------------~~~dt~~i~pg~~~t~~~~a~ 117 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNE----ADVHGIYFSGNTYLWRG-------------------ERRDTANLFPQTSLTLHMWPD 117 (145)
T ss_dssp CEEETTCCEEEEEECCCST----TCCEEEEETTCCEEETT-------------------EEESEEEECTTCEEEEEECCC
T ss_pred eEEEcCCeEEEEEEecCCC----CcccceEecccEEEecc-------------------cCccceEECCCCEEEEEEEcC
Confidence 7789999999999996543 23699999999998743 468999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+||.|+||||++.|++.|||+.|.|.
T Consensus 118 ~pG~w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 118 TEGTFNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CCEeEEEEcCCHHHHhCCCeEEEEEe
Confidence 99999999999999999999999874
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.8e-21 Score=175.27 Aligned_cols=85 Identities=31% Similarity=0.512 Sum_probs=73.5
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEc-CCCc---------
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKV-DKAG--------- 127 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~-~~~G--------- 127 (580)
.++||+||+++||+|+|+|+|. +..++||||||+.... .+ +++|+||++++|+|++ ++.|
T Consensus 82 g~lGP~IraevGD~i~V~f~N~-a~~p~SiH~HGv~~~~--~~-------~~~v~PGet~tY~w~v~~~~gp~~~d~~c~ 151 (179)
T d2j5wa4 82 GILGPQLHADVGDKVKIIFKNM-ATRPYSIHAHGVQTES--ST-------VTPTLPGETLTYVWKIPERSGAGTEDSACI 151 (179)
T ss_dssp TTSCCCEEEETTEEEEEEEEEC-SSSCBCCEESSCBCSC--SC-------CCCBCTTCEEEEEEECCGGGSCCTTSCSEE
T ss_pred CccCCeEEEECCCEEEEEEEeC-CCCCEeEeeccccCCC--CC-------CCcccCCccEEEEEEecCccCCccCCCCce
Confidence 4789999999999999999999 8999999999998742 23 4579999999999999 4343
Q ss_pred ceeeecCcc--hhhccccEEEEEEEcC
Q 008038 128 TYFYHGHLG--MQRSAGLYGSLIVDVA 152 (580)
Q Consensus 128 t~wYH~H~~--~~~~~Gl~G~liV~~~ 152 (580)
|||||||+. .|..+||+|+|||+.+
T Consensus 152 t~~YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 152 PWAYYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EEEEECCTTHHHHHHTTCEEEEEEECC
T ss_pred eEEEecCCCcHHHhhCCCeEEEEEEeC
Confidence 999999975 4678999999999965
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.83 E-value=1.3e-22 Score=172.57 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=56.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|++|+|.|.|.+.. ...||||+||+.|++.. .++||+.|+|++..+++|+++
T Consensus 37 ~~v~~Gd~v~~~v~n~g~~----~~~h~iH~Hg~~f~~~~-------------------~~~dtv~i~pg~~~~v~~~a~ 93 (116)
T d1sdda2 37 ITVCAHDHISWHLIGMSSG----PELFSIHFNGQVLEQNH-------------------HKISAITLVSATSTTANMTVS 93 (116)
T ss_dssp CCCCCC------BBCCCSS----SCEECCBCSSTTCEETT-------------------EECSCCCEETTCCBC------
T ss_pred eEEeCCCEEEEEEeccccC----CCceeEEEeccccccCC-------------------cccceEeecccEEEEEEEEcC
Confidence 6788999999999996533 22699999999998732 468999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEE
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVL 550 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~ 550 (580)
+||.|+||||++.|++.|||+.+
T Consensus 94 ~pG~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 94 PEGRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp --CCCCCBCCSTTTGGGTCBCCC
T ss_pred CCeEEEEEcCCHHHHHccceecC
Confidence 99999999999999999999864
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.3e-20 Score=169.83 Aligned_cols=123 Identities=21% Similarity=0.256 Sum_probs=93.7
Q ss_pred CCCC-CcceEEEEeecccCchHHHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEE
Q 008038 158 PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 236 (580)
Q Consensus 158 p~~~-d~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (580)
|-.| ..|++|+++||+++....+..............++.++|||+..+ .+.
T Consensus 3 P~~yg~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p---------------------------~~~ 55 (165)
T d1kv7a2 3 PKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP---------------------------QHA 55 (165)
T ss_dssp CCCBTTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSSC---------------------------EEE
T ss_pred CCCCCCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcccc---------------------------eEe
Confidence 4445 358999999998866543221100000000235689999999887 566
Q ss_pred EecCCEEEEEEeecCCceeEEEEE-eCeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEEe
Q 008038 237 VQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 310 (580)
Q Consensus 237 v~~Ge~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~~ 310 (580)
++ |+++||||||||..+.+.|++ +||+|+|||.||+++ +|+.++++.|+|||||||+|++.+ .+.+.+...
T Consensus 56 ~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~~~~l 128 (165)
T d1kv7a2 56 AP-RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTL 128 (165)
T ss_dssp EE-EEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEEC
T ss_pred cc-CcEEEEEEEEcccCceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCC--CCcEEEEEE
Confidence 64 779999999999999999998 689999999999999 799999999999999999999987 455555443
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=4.7e-20 Score=167.56 Aligned_cols=140 Identities=15% Similarity=0.231 Sum_probs=102.1
Q ss_pred CCcceEEEEeecccCchHHHHhhhcCCC---------CCCCCCCceEEeCccCCCCccccccccCCCcccccccCCCCCC
Q 008038 161 YDGEFNLLLSDWWHRSVHEQEVGLSSRP---------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCA 231 (580)
Q Consensus 161 ~d~e~~l~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (580)
.|+|++|+++||.++...++........ ......++.++|||+.++
T Consensus 5 gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~p------------------------- 59 (174)
T d1gska2 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP------------------------- 59 (174)
T ss_dssp GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-------------------------
T ss_pred CCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccce-------------------------
Confidence 3679999999998876654432111100 000234688999999887
Q ss_pred ceEEEEecCCEEEEEEeecCCceeEEEEEe-CeeeEEEEECCccc-CceeeeeEEEcCCceEEEEEEeCCCCCcceEEEE
Q 008038 232 PQILHVQPNKTYRLRIASTTALASLNLAVK-NHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 309 (580)
Q Consensus 232 ~~~~~v~~Ge~~rlRliNag~~~~~~~~i~-gh~~~via~DG~~v-~P~~~d~v~l~pGeR~dv~v~~~~~~~g~y~l~~ 309 (580)
.++++ +++|||||||+|..+.+.|+|. ||+|+|||.||+++ +|+.++++.|+|||||||+|++++. +|.+++..
T Consensus 60 --~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~~~~l~ 135 (174)
T d1gska2 60 --YLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGESIILA 135 (174)
T ss_dssp --EEECC-SSEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTCEEEEE
T ss_pred --EEEec-CceEEEEEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCC-CCceEEEE
Confidence 67775 5679999999999999999995 78999999999999 6999999999999999999999874 44444433
Q ss_pred eecCCCC--CCCCceEEEEecC
Q 008038 310 GVRGRKP--ATPPALTLLNYHP 329 (580)
Q Consensus 310 ~~~~~~~--~~~~~~ail~y~~ 329 (580)
+...... .......+++|..
T Consensus 136 ~~~~~~~~~~~~~~~~vl~~~v 157 (174)
T d1gska2 136 NSAGCGGDVNPETDANIMQFRV 157 (174)
T ss_dssp ECCCSSSCCCTTTTTEEEEEEC
T ss_pred ccCCCCCccCCCCCcceEEEEe
Confidence 3222211 2334456777763
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.9e-20 Score=166.43 Aligned_cols=83 Identities=20% Similarity=0.347 Sum_probs=73.7
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.|.|.+.. ...||||+||+.|.+ ++.++||+.|+||++.+++|+++
T Consensus 62 l~~~~gd~v~~~l~n~g~~----~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~ 118 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNE----VDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQ 118 (146)
T ss_dssp CEEETTEEEEEEEECCCST----TCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEEC
T ss_pred ceEecCCeEEEEEEEcCCC----CcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcC
Confidence 7889999999999996543 237999999998842 24679999999999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEecc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+||.|+||||++.|++.||++.|.|.
T Consensus 119 ~pG~w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 119 NPGEWMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp SCEEEEEEECCHHHHHTCCEEEEEEE
T ss_pred CCeeEEEEcCCHHHHhcCCeEEEEEE
Confidence 99999999999999999999999874
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.81 E-value=2.5e-20 Score=165.76 Aligned_cols=91 Identities=19% Similarity=0.200 Sum_probs=76.9
Q ss_pred EEccCCcEEEEEEEcC-CCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 448 YMLGLNTTVDVILQNA-NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~-~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++++.|++|+|.|.|. ... .||||+||+.|+++...++... ...+||+.|+||++.+++|++
T Consensus 53 l~~~~Ge~vri~v~N~~~~~------~~~~H~hG~~f~~v~~~G~~~~-----------~~~~~T~~v~pg~~~~~~f~a 115 (151)
T d1kbva2 53 LKAKAGETVRMYVGNGGPNL------VSSFHVIGEIFDKVYVEGGKLI-----------NENVQSTIVPAGGSAIVEFKV 115 (151)
T ss_dssp EEEETTEEEEEEEEEEESSC------CEEEEEETCCBSEEEGGGSSCE-----------ECSBSEEEECTTEEEEEEEEE
T ss_pred eEEEeCCeEEEEEEcCCccc------cccceeecceeeEEecCCCcCC-----------cccceeEecccCceeEEeeec
Confidence 8899999999999994 344 8999999999999976433221 145799999999999999999
Q ss_pred cCceeeEEeeecch-hhhcccEEEEecccc
Q 008038 527 DNPGAWAFHCHIEP-HFHIGMGVVLALGVE 555 (580)
Q Consensus 527 dnpG~w~~HCHil~-H~d~GM~~~~~~~~~ 555 (580)
++||.|+||||++. |++.|||++|.+...
T Consensus 116 ~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~ 145 (151)
T d1kbva2 116 DIPGNYTLVDHSIFRAFNKGALGQLKVEGA 145 (151)
T ss_dssp CSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred CCCceEEEECCcHHHHHhccCeEEEEEcCC
Confidence 99999999999865 579999999987553
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.78 E-value=1.6e-19 Score=161.82 Aligned_cols=105 Identities=18% Similarity=0.142 Sum_probs=84.7
Q ss_pred CCCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCC--ceeeeeccccccC--CCCCCCCCCCccccCCCCCeEEEE
Q 008038 45 PDCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTE--GVVIHWHGIRQLG--TPWADGTASISQCPINPGETYLYR 120 (580)
Q Consensus 45 ~~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~--~~siH~HG~~~~~--~~~~DG~~~~~q~~i~pG~~~~y~ 120 (580)
..|.....+.+||+ +||+|+|++||+|+|+|+|..... +..||+||..... ....++.+...++.+.||++++|.
T Consensus 44 ~~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~ 122 (153)
T d1e30a_ 44 LPGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTN 122 (153)
T ss_dssp CTTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEE
T ss_pred ccccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEE
Confidence 45788888999997 799999999999999999973333 4556666655421 123344444567899999999999
Q ss_pred EEc-CCCcceeeecCcchhhccccEEEEEEE
Q 008038 121 FKV-DKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 121 f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
|.+ +++||||||||...|..+||+|.|||+
T Consensus 123 f~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 123 FTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 986 889999999999999999999999996
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.70 E-value=1.2e-17 Score=148.27 Aligned_cols=102 Identities=24% Similarity=0.296 Sum_probs=85.7
Q ss_pred EEEEcCCCCCCe----EEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEc
Q 008038 52 VMGINGQFPGPT----IRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKV 123 (580)
Q Consensus 52 ~~~~NG~~pgP~----l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~ 123 (580)
.++|||..++++ |++++||+|+|++.|.....++++|+||.+... .+.||.+ ....+.|+||++.+++|++
T Consensus 37 ~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~-v~~~G~~~~~~~~~T~~v~pg~~~~~~f~a 115 (151)
T d1kbva2 37 YVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK-VYVEGGKLINENVQSTIVPAGGSAIVEFKV 115 (151)
T ss_dssp EEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE-EEGGGSSCEECSBSEEEECTTEEEEEEEEE
T ss_pred EEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeE-EecCCCcCCcccceeEecccCceeEEeeec
Confidence 589999988765 999999999999999746678999999988643 3556643 3456789999999999999
Q ss_pred CCCcceeeecCcchh-hccccEEEEEEEcCCC
Q 008038 124 DKAGTYFYHGHLGMQ-RSAGLYGSLIVDVADG 154 (580)
Q Consensus 124 ~~~Gt~wYH~H~~~~-~~~Gl~G~liV~~~~~ 154 (580)
+++|+||||||...+ ...||.|.|+|+++.+
T Consensus 116 ~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 116 DIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp CSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred CCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 999999999996544 5679999999998754
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.3e-17 Score=146.54 Aligned_cols=100 Identities=21% Similarity=0.228 Sum_probs=88.3
Q ss_pred eEEEEEcCCCCC--CeEEecCCCEEEEEEEeCCC-CCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCC
Q 008038 50 SIVMGINGQFPG--PTIRARAGDTIAVELTNKLY-TEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 50 ~~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l~-~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~ 126 (580)
..+++|||..+| |.|++++||+|+++|.|... ...+++|+||.... ...+|.+....+.|.||++.+|+|+++.+
T Consensus 46 ~~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~--~~~~g~~~~dtv~i~pg~~~~~~~~a~~p 123 (149)
T d2j5wa5 46 NKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQ--YKHRGVYSSDVFDIFPGTYQTLEMFPRTP 123 (149)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEE--ETTTTCEEESEEEECTTCEEEEEECCCSC
T ss_pred ccceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEee--eeccCCCCcceEEECCCceEEEEEeCCCC
Confidence 368999999998 88999999999999999732 35799999998764 24577766667899999999999999999
Q ss_pred cceeeecCcchhhccccEEEEEEEc
Q 008038 127 GTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 127 Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
|+||||||...+...||.|.++|.+
T Consensus 124 G~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 124 GIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred eeEEEEcCCHHHHhccCceEEEEec
Confidence 9999999999999999999999975
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.69 E-value=2.4e-17 Score=144.49 Aligned_cols=98 Identities=21% Similarity=0.327 Sum_probs=84.7
Q ss_pred eEEEEEcCCC-CCCeEEecCCCEEEEEEEeCC-CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCc
Q 008038 50 SIVMGINGQF-PGPTIRARAGDTIAVELTNKL-YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAG 127 (580)
Q Consensus 50 ~~~~~~NG~~-pgP~l~v~~Gd~v~v~v~N~l-~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~G 127 (580)
..+++|||.. +.|.|++++||+|+++|.|.. ....+++||||..... ..+|.+...+++|.||++++|+|+++++|
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~~~~pG 116 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMKASKPG 116 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEECCSSE
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEecCCCE
Confidence 4478999974 789999999999999999972 2356999999987652 34555556678999999999999999999
Q ss_pred ceeeecCcchhhccccEEEEEE
Q 008038 128 TYFYHGHLGMQRSAGLYGSLIV 149 (580)
Q Consensus 128 t~wYH~H~~~~~~~Gl~G~liV 149 (580)
+||||||...+...||+|.++|
T Consensus 117 ~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 117 WWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEECCCHHHHTTTCEEEEEE
T ss_pred eEEEEeCCHHHHhccCcEEEEE
Confidence 9999999999999999999998
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=6.1e-17 Score=143.41 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=83.1
Q ss_pred EEEEEcCCCCC--CeEEecCCCEEEEEEEeCC-CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCc
Q 008038 51 IVMGINGQFPG--PTIRARAGDTIAVELTNKL-YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAG 127 (580)
Q Consensus 51 ~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l-~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~G 127 (580)
.+++|||..+| |.|++++||+|+++|.|.. ....+++|+||...... + .....++|.||++++|+|+++++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~----~-~~~dt~~i~pg~~~~v~f~~~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNK----N-YRIDTINLFPATLFDAYMVAQNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCS----S-SCCSEEEECTTCEEEEEEEECSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeecc----C-CCcceEEecCCCEEEEEEEcCCCe
Confidence 47899999999 9999999999999999973 23569999999866422 1 233467899999999999999999
Q ss_pred ceeeecCcchhhccccEEEEEEEc
Q 008038 128 TYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 128 t~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+||||||...+...||.|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999984
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.8e-17 Score=145.22 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=83.4
Q ss_pred eEEEEEcCCCCC--CeEEecCCCEEEEEEEeCC-CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCC
Q 008038 50 SIVMGINGQFPG--PTIRARAGDTIAVELTNKL-YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 50 ~~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l-~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~ 126 (580)
..+++|||..+| |.|++++||+|++++.|.. ....+++|+||..... ++ .....+.|.||++.+|+|+++.+
T Consensus 45 n~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~-~~~dt~~i~pg~~~t~~~~a~~p 119 (145)
T d2j5wa2 45 NKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RG-ERRDTANLFPQTSLTLHMWPDTE 119 (145)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TT-EEESEEEECTTCEEEEEECCCSC
T ss_pred cceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cc-cCccceEECCCCEEEEEEEcCCC
Confidence 368999999999 9999999999999999952 3456999999987542 12 22345789999999999999999
Q ss_pred cceeeecCcchhhccccEEEEEEEc
Q 008038 127 GTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 127 Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
|+||||||...+...||.|.++|+.
T Consensus 120 G~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 120 GTFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred EeEEEEcCCHHHHhCCCeEEEEEec
Confidence 9999999999999999999999973
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.64 E-value=2.8e-16 Score=139.78 Aligned_cols=90 Identities=24% Similarity=0.211 Sum_probs=74.5
Q ss_pred ceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCcc--ceEEeCCCcEEEE
Q 008038 445 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLK--NTAVIFPYGWTAL 522 (580)
Q Consensus 445 ~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~r--DTv~vpp~g~v~i 522 (580)
...++++.|++|.++..|.+ . .|+||+||+.|.+|... |.+ .++..+ +|+.|++|+.+++
T Consensus 65 ~~~l~akvGErV~i~~~~~n-~------~s~fHliG~hFD~V~~~-G~~----------~~~p~~~~qTv~VppG~a~~v 126 (173)
T d2bw4a2 65 DHALTAAVGERVLVVHSQAN-R------DTRPHLIGGHGDYVWAT-GKF----------RNPPDLDQETWLIPGGTAGAA 126 (173)
T ss_dssp GGCEEEETTCEEEEEEEESS-S------CBCEEEETCCEEEEETT-CCT----------TSCCEEEESCCCBCTTEEEEE
T ss_pred ccCcccccCCeEEEEecCCC-C------CccceeccceeEEECCC-Ccc----------cCCCcCCceeEEccCCccEEE
Confidence 34599999999987665554 3 79999999999999763 333 234444 4999999999999
Q ss_pred EEEecCceeeEEeeec-chhhhcccEEEEec
Q 008038 523 RFVADNPGAWAFHCHI-EPHFHIGMGVVLAL 552 (580)
Q Consensus 523 rf~adnpG~w~~HCHi-l~H~d~GM~~~~~~ 552 (580)
+|++++||.|+||||. ..|++.|||++|.|
T Consensus 127 e~~f~~PG~y~~v~H~l~ea~~~G~~g~l~V 157 (173)
T d2bw4a2 127 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKV 157 (173)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEE
T ss_pred EEEecCceEEEEEechHHHHHhCCCEEEEEE
Confidence 9999999999999996 57899999999966
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.60 E-value=9.8e-16 Score=132.05 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=81.0
Q ss_pred CCceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCC
Q 008038 46 DCKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDK 125 (580)
Q Consensus 46 ~g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~ 125 (580)
++....+++.++++++|.|+|++||+|+|+|+|. ......+|+|++...+ + ...+.||++.+|+|++++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~-d~~~~v~H~~~i~~~~---------~-~~~~~PG~~~~~~F~a~~ 104 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNL-DEIDDLTHGFTMGNYG---------V-AMEIGPQMTSSVTFVAAN 104 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEEC-CCSTTCCEEEEETTTT---------E-EEEECTTCEEEEEEECCS
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcC-CCCccceEeechhhhc---------c-ccccCCCEEEEEEEeCCC
Confidence 4567778899999999999999999999999999 6677889999985432 1 357899999999999999
Q ss_pred CcceeeecCcchhh-ccccEEEEEEEcC
Q 008038 126 AGTYFYHGHLGMQR-SAGLYGSLIVDVA 152 (580)
Q Consensus 126 ~Gt~wYH~H~~~~~-~~Gl~G~liV~~~ 152 (580)
+||||||||..... -.||+|.|||+|+
T Consensus 105 ~G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 105 PGVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CeEEEEECccccCcchhcCEEEEEEEcC
Confidence 99999999953222 2689999999974
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.60 E-value=2.7e-17 Score=139.35 Aligned_cols=93 Identities=22% Similarity=0.253 Sum_probs=64.8
Q ss_pred eEEEEEcCCCCC--CeEEecCCCEEEEEEEeCC-CCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCC
Q 008038 50 SIVMGINGQFPG--PTIRARAGDTIAVELTNKL-YTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 50 ~~~~~~NG~~pg--P~l~v~~Gd~v~v~v~N~l-~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~ 126 (580)
..+|+|||..++ |.|++++||+|+++|.|.. .+..+++|+||..... +|. ....++|.||++.+|+|+++.+
T Consensus 21 ~~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~----~~~-~~dtv~i~pg~~~~v~~~a~~p 95 (116)
T d1sdda2 21 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NHH-KISAITLVSATSTTANMTVSPE 95 (116)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TTE-ECSCCCEETTCCBC--------
T ss_pred CcEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEecccccc----CCc-ccceEeecccEEEEEEEEcCCC
Confidence 347999999998 6799999999999999962 3567999999987642 222 2335789999999999999999
Q ss_pred cceeeecCcchhhccccEEEE
Q 008038 127 GTYFYHGHLGMQRSAGLYGSL 147 (580)
Q Consensus 127 Gt~wYH~H~~~~~~~Gl~G~l 147 (580)
|+||||||...+...||+|.|
T Consensus 96 G~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 96 GRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC
T ss_pred eEEEEEcCCHHHHHccceecC
Confidence 999999999999999999864
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.54 E-value=9.5e-15 Score=129.53 Aligned_cols=90 Identities=24% Similarity=0.239 Sum_probs=75.1
Q ss_pred ceeEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccc--eEEeCCCcEEEE
Q 008038 445 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTAL 522 (580)
Q Consensus 445 ~~~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rD--Tv~vpp~g~v~i 522 (580)
...++++.|++|++...+. +. .++||+||..|..|-. .|.+ .++..+| |+.|+||+.+++
T Consensus 65 ~~~l~akvGe~Vri~~~~~-N~------~ssfHlIG~hfD~V~~-~G~~----------~n~p~~~~qT~~V~pG~~~~v 126 (177)
T d1oe1a2 65 ANALTAKVGETVLLIHSQA-NR------DTRPHLIGGHGDWVWE-TGKF----------ANPPQRDLETWFIRGGSAGAA 126 (177)
T ss_dssp GGCEEEETTCEEEEEEEES-SS------CBCEEETTCCEEEEET-TCCT----------TSCCEEEESBCCBCTTEEEEE
T ss_pred CCCcccccCCeEEEEecCC-CC------CccceecccccceEcc-CCee----------CCCCCcCceeEEecCCccEEE
Confidence 3458999999999865444 44 8999999999999875 3433 3556675 999999999999
Q ss_pred EEEecCceeeEEeeecc-hhhhcccEEEEec
Q 008038 523 RFVADNPGAWAFHCHIE-PHFHIGMGVVLAL 552 (580)
Q Consensus 523 rf~adnpG~w~~HCHil-~H~d~GM~~~~~~ 552 (580)
.|++++||.|+||||.+ .|++.|||++|.|
T Consensus 127 ~~tf~~PG~Y~fV~H~L~ea~~~Ga~g~l~V 157 (177)
T d1oe1a2 127 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKV 157 (177)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEE
T ss_pred EEEecCceEEEEEecHHHHHHhcCCeEEEEe
Confidence 99999999999999975 6899999999965
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.53 E-value=2.1e-14 Score=120.41 Aligned_cols=94 Identities=23% Similarity=0.201 Sum_probs=76.5
Q ss_pred eCCCCce-eEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEE
Q 008038 43 WSPDCKE-SIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRF 121 (580)
Q Consensus 43 ~~~~g~~-~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f 121 (580)
+..+|.. +.++..|+.++.++|+|++||+|+++++|. ...++++++|+... +..+.||++.+|+|
T Consensus 18 ~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~-d~~~H~~~i~~~~~-------------~~~~~pG~t~~~~f 83 (112)
T d1ibya_ 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK-SPISEGFSIDAFGV-------------QEVIKAGETKTISF 83 (112)
T ss_dssp EEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEEC-SSSCEEEEEGGGTE-------------EEEECTTCEEEEEE
T ss_pred eccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeC-CCCceeeeeccccc-------------ccccCCcceEEEEE
Confidence 4456765 556777777766699999999999999999 66778888887643 34688999999999
Q ss_pred EcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 122 KVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 122 ~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+++++|+||||||.... ..||.|.|+|.+
T Consensus 84 ~~~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 84 TADKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp ECCSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred EeccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 99999999999996332 467999999974
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.46 E-value=2.3e-14 Score=127.57 Aligned_cols=90 Identities=16% Similarity=0.079 Sum_probs=73.4
Q ss_pred eEEccCCcEEEEEEEcCCC-CCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE
Q 008038 447 VYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 525 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~-~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ 525 (580)
.+.++.|++|+|.|.|.+. + .||||||++.+.+....... ...+...++..+.||+...++|+
T Consensus 61 ti~v~~Gd~V~i~v~N~~~~~------~H~~~ih~~g~~~~~~~~~~----------~~~~~~~~~~~v~pg~~~~~~f~ 124 (153)
T d1e30a_ 61 TLEIPAGATVDVTFINTNKGF------GHSFDITKKGPPYAVMPVID----------PIVAGTGFSPVPKDGKFGYTNFT 124 (153)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESCCSSCCSSCCCC----------SEEEEBCCCCCCBTTEEEEEEEE
T ss_pred eEEEeCCCEEEEEEEeCCCCC------cccEEEEcCCCCcccccccc----------ccCCCccceeeecCCCEEEEEEE
Confidence 4899999999999999643 4 89999999877665442211 11235678888999999999998
Q ss_pred -ecCceeeEEeeecchhhhcccEEEEec
Q 008038 526 -ADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 526 -adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+++||.|.||||+..|++.||++.|.|
T Consensus 125 ~~~~pGty~YhCh~~~H~~~GM~G~iiV 152 (153)
T d1e30a_ 125 WHPTAGTYYYVCQIPGHAATGQFGKIVV 152 (153)
T ss_dssp ECCCSEEEEEECCSTTTTTTTCEEEEEE
T ss_pred eCCCCeEEEEeCCchhHHHCCCEEEEEE
Confidence 589999999999999999999999976
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.36 E-value=2.2e-12 Score=110.67 Aligned_cols=88 Identities=24% Similarity=0.190 Sum_probs=65.0
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.+.|.... ..+.+|.||..+ ...... + .....+...|.||+...++|.++
T Consensus 36 i~v~~GD~v~i~l~N~l~~-----~~~~iH~Hg~~~--~~~~~~-----~-------~~~~~~~~~I~PG~s~~y~f~a~ 96 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHT-----EGVVIHWHGILQ--RGTPWA-----D-------GTASISQCAINPGETFFYNFTVD 96 (129)
T ss_dssp EEEETTCEEEEEEEECCSS-----CCBCEEEETCCC--TTCGGG-----S-------CCBTTTBCCBCTTCEEEEEEECC
T ss_pred EEEECCcEEEEEEEeCCCC-----CCeeeeecccee--eccCcc-----c-------cccccccceECCCCEEEEEEECC
Confidence 8899999999999996432 145566666543 221110 0 01122344589999999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+||.|+||||...|...||++.|.+.+
T Consensus 97 ~~Gt~~YH~H~~~h~~~Gm~G~~iV~~ 123 (129)
T d1aoza1 97 NPGTFFYHGHLGMQRSAGLYGSLIVDP 123 (129)
T ss_dssp SCEEEEEEECSTTTGGGTCEEEEEEEC
T ss_pred CCCceEEecCCHHHHhCCCEEEEEEcC
Confidence 999999999999999999999997755
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.32 E-value=4.4e-13 Score=99.45 Aligned_cols=45 Identities=24% Similarity=0.532 Sum_probs=39.0
Q ss_pred cCCCCCeEEEEEEc-CCCc---------ceeeecCcc--hhhccccEEEEEEEcCCC
Q 008038 110 PINPGETYLYRFKV-DKAG---------TYFYHGHLG--MQRSAGLYGSLIVDVADG 154 (580)
Q Consensus 110 ~i~pG~~~~y~f~~-~~~G---------t~wYH~H~~--~~~~~Gl~G~liV~~~~~ 154 (580)
+|.||++|+|+|++ +.+| |||||||+. .|+.+||+|+|||+++..
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 58999999999999 4444 999999975 488999999999998754
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.28 E-value=5.5e-12 Score=111.56 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=109.7
Q ss_pred CCCCCCcceEEEEeecccCchH-HHHhhhcCCCCCC--------CCCCceEEeCccCCCCccccccccCCCcccccccCC
Q 008038 157 EPFHYDGEFNLLLSDWWHRSVH-EQEVGLSSRPLRW--------IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGN 227 (580)
Q Consensus 157 ~p~~~d~e~~l~~~d~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (580)
.|+.||++++++-+|+|...+. .....+...+..+ ...|+++.+||+... ++
T Consensus 3 ~~~~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~m~~~~P~~vvFNG~~ga-------lt------------ 63 (177)
T d1oe1a2 3 KPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGA-------LT------------ 63 (177)
T ss_dssp CBCCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTT-------TS------------
T ss_pred CCcccceEEEecccEeecCCCCCCCccccCChhhcchhHHHHHhccCCcEEEECCcccc-------cc------------
Confidence 4788999999999999984321 1000111111000 247899999999776 11
Q ss_pred CCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCc-e-eeeeEEEcCCceEEEEEEeCCCCCcce
Q 008038 228 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNY 305 (580)
Q Consensus 228 ~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P-~-~~d~v~l~pGeR~dv~v~~~~~~~g~y 305 (580)
....++++.||+|| |++++++...+||+.|+.|..|..+|.+..| . .++++.|.+|++..+.+++++ +|.|
T Consensus 64 ---~~~~l~akvGe~Vr--i~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~~--PG~Y 136 (177)
T d1oe1a2 64 ---GANALTAKVGETVL--LIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVY 136 (177)
T ss_dssp ---GGGCEEEETTCEEE--EEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEE
T ss_pred ---CCCCcccccCCeEE--EEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEecC--ceEE
Confidence 11259999999885 5788889999999999999999999998854 3 468999999999999999987 9999
Q ss_pred EEEEeecCCCCCCCCceEEEEecCCC
Q 008038 306 WISAGVRGRKPATPPALTLLNYHPTS 331 (580)
Q Consensus 306 ~l~~~~~~~~~~~~~~~ail~y~~~~ 331 (580)
.+++|.+.+. ....+.|+|.+.+..
T Consensus 137 ~fV~H~L~ea-~~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 137 AYLNHNLIEA-FELGAAGHIKVEGKW 161 (177)
T ss_dssp EEEESSHHHH-HTTSCEEEEEEESCC
T ss_pred EEEecHHHHH-HhcCCeEEEEecCCC
Confidence 9999964321 135678999998543
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.27 E-value=6.6e-12 Score=111.26 Aligned_cols=146 Identities=15% Similarity=0.106 Sum_probs=108.0
Q ss_pred CCCCCCcceEEEEeecccCchH-----------HHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCccccccc
Q 008038 157 EPFHYDGEFNLLLSDWWHRSVH-----------EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLR 225 (580)
Q Consensus 157 ~p~~~d~e~~l~~~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~~ 225 (580)
.|+.||+++++.-+|+|..... ....+.. .-+. ...|+++++||+... +
T Consensus 3 ~~~~yD~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~-~~m~-~~~Pt~vvFNG~v~a---l--------------- 62 (173)
T d2bw4a2 3 QPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAV-KAMR-TLTPTHIVFNGAVGA---L--------------- 62 (173)
T ss_dssp CEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHH-HHHH-TTCCSEEEETTSTTT---T---------------
T ss_pred CccccceEEEecccEeecCCCCCCCccCcCChhhcchhHH-HHHh-ccCCCEEEECCCccc---c---------------
Confidence 4788999999999999973211 1111000 0001 237899999998664 1
Q ss_pred CCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccCc--eeeeeEEEcCCceEEEEEEeCCCCCc
Q 008038 226 GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP--FEVDDMDIYSGESYSVLLTTNQDPSY 303 (580)
Q Consensus 226 ~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~P--~~~d~v~l~pGeR~dv~v~~~~~~~g 303 (580)
.....++++.||+| ||+|+++....+||+.|+.|.+|..+|.+..| ..++++.|.+|++..+.+++++ +|
T Consensus 63 ----tg~~~l~akvGErV--~i~~~~~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~~--PG 134 (173)
T d2bw4a2 63 ----TGDHALTAAVGERV--LVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PG 134 (173)
T ss_dssp ----SGGGCEEEETTCEE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CE
T ss_pred ----ccccCcccccCCeE--EEEecCCCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEecC--ce
Confidence 11125999999976 57888888889999999999999999998853 3467999999999999999987 89
Q ss_pred ceEEEEeecCCCCCCCCceEEEEecCCC
Q 008038 304 NYWISAGVRGRKPATPPALTLLNYHPTS 331 (580)
Q Consensus 304 ~y~l~~~~~~~~~~~~~~~ail~y~~~~ 331 (580)
.|.++||.+.+. -...+.++|.+++..
T Consensus 135 ~y~~v~H~l~ea-~~~G~~g~l~V~G~~ 161 (173)
T d2bw4a2 135 VYAYVNHNLIEA-FELGAAGHFKVTGEW 161 (173)
T ss_dssp EEEEEESSHHHH-HTTSCEEEEEEESCC
T ss_pred EEEEEechHHHH-HhCCCEEEEEEcCCC
Confidence 999999964321 124578899998543
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.27 E-value=1.6e-11 Score=109.42 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=68.9
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.+.|.... ..+.+|+||..+......++. +.......+++|++..++|.++
T Consensus 69 I~~~~Gd~v~v~l~N~l~~-----~~~~ih~Hg~~~~~~~~~~g~-------------~~~~~~~i~~pg~~~~y~f~~~ 130 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVT-----NGTSIHWHGIHQKDTNLHDGA-------------NGVTECPIPPKGGQRTYRWRAR 130 (162)
T ss_dssp EEEETTCEEEEEEEEECSS-----CCBCEEEETCCCTTCGGGSCC-------------BTTTBCCBCTTTEEEEEEEECC
T ss_pred EEEECCcEEEEEEEecCcc-----cccccccccccccCCCcCCCC-------------cccccceecCCCCEEEeeecCC
Confidence 8899999999999995321 168899999977433322211 1222334578899999999999
Q ss_pred CceeeEEeeecchhhhcccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
++|.|+||||+..|...||.+.|.+.+
T Consensus 131 ~~Gt~wYH~H~~~q~~~Gl~G~~iV~~ 157 (162)
T d2q9oa1 131 QYGTSWYHSHFSAQYGNGVVGTIQING 157 (162)
T ss_dssp SCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred CCEEEEeecCCHHHHhCCCEEEEEECC
Confidence 999999999999999999999997754
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.27 E-value=8.3e-12 Score=110.14 Aligned_cols=84 Identities=24% Similarity=0.272 Sum_probs=64.4
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.++++.|+.|++.+.|.... ...|.+|+|+.... .+ ......|+||+..+++|++
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~----~~~H~~~~h~~~~~-----~~----------------~~~~~~i~PG~t~ty~f~a 117 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPEN----TMPHNIDFHAATGA-----LG----------------GGGLTLINPGEKVVLRFKA 117 (153)
T ss_dssp EEEEETTCEEEEEEEECTTC----CSCBCCEETTSCSG-----GG----------------GGGGCCBCTTEEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEcCCCC----ceEccCccccCCcC-----CC----------------CCccccccCCCEEEEEEEc
Confidence 38999999999999995321 12688999986421 00 0112247899999999999
Q ss_pred cCceeeEEeee-----cchhhhcccEEEEecccc
Q 008038 527 DNPGAWAFHCH-----IEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 527 dnpG~w~~HCH-----il~H~d~GM~~~~~~~~~ 555 (580)
++||.|+|||| +..|...||++.+.+.++
T Consensus 118 ~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~ 151 (153)
T d1mzya1 118 TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151 (153)
T ss_dssp CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred CCCceEEEEeCCcccccHhHHhCCCEEEEEEecC
Confidence 99999999999 457999999999987653
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.22 E-value=6.4e-12 Score=111.30 Aligned_cols=84 Identities=24% Similarity=0.351 Sum_probs=62.3
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
+++++.|+.|+|.|.|.... ...|.+|+|+... +.+. ...-.|.||+..+++|++
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~----~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a 119 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTN----TLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKA 119 (157)
T ss_dssp EEEEETTCEEEEEEEECTTC----CSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCC----cceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEEC
Confidence 38899999999999994211 1146666666421 1110 011237899999999999
Q ss_pred cCceeeEEeee----cchhhhcccEEEEecccc
Q 008038 527 DNPGAWAFHCH----IEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 527 dnpG~w~~HCH----il~H~d~GM~~~~~~~~~ 555 (580)
++||.|+|||| +.+|...||.+.|.+.++
T Consensus 120 ~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~ 152 (157)
T d2bw4a1 120 TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152 (157)
T ss_dssp CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred CCCccceEEECCCCchHHHHhCCCEEEEEEeCC
Confidence 99999999999 678999999999987654
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.21 E-value=2.1e-11 Score=104.17 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=74.1
Q ss_pred CceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCC
Q 008038 47 CKESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKA 126 (580)
Q Consensus 47 g~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~ 126 (580)
+....++....++..+.|+|++||+|.++|+|. ....-.+|..++...+ + +..+.||++.++.|+++++
T Consensus 36 ~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~-~~s~Dv~H~f~ip~~~---------v-~~~~~PG~t~~~~f~~~~~ 104 (131)
T d1qnia1 36 KVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNL-DMVEDVTHGFCMVNHG---------V-SMEISPQQTASVTFTAGKP 104 (131)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEEC-CCSTTCCEEEEETTTT---------E-EEEECTTCEEEEEEECCSS
T ss_pred ceeEEEEEeccCCccceEEecCCCEEEEEEEcc-CCCCcceEEEEEeccC---------c-ccccCCCceEEEEEEcCCC
Confidence 345668888999999999999999999999998 4444455555553321 1 3468899999999999999
Q ss_pred cceeeecCcchhh-ccccEEEEEEEcC
Q 008038 127 GTYFYHGHLGMQR-SAGLYGSLIVDVA 152 (580)
Q Consensus 127 Gt~wYH~H~~~~~-~~Gl~G~liV~~~ 152 (580)
|+|||||+.--.. -.+|.|.|+|+|+
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vepa 131 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEAA 131 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEECC
T ss_pred EEEEEECccccCcchhcCeeEEEEEeC
Confidence 9999999942222 2589999999974
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.20 E-value=1.9e-11 Score=107.69 Aligned_cols=83 Identities=20% Similarity=0.266 Sum_probs=60.2
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|+.+++.+.|.... ...|.+|+|+... ..+. ...+. |.||+..+++|+++
T Consensus 60 i~v~~Gd~v~v~~~N~~~~----~~~H~~~~h~~~~-----~~~~--------------~~~~~--i~PG~t~~y~f~a~ 114 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSS----TVPHNVDFHAATG-----QGGG--------------AAATF--TAPGRTSTFSFKAL 114 (151)
T ss_dssp EEEETTCEEEEEEEECTTC----SSCBCCEETTCCS-----GGGG--------------TTTTC--BCTTEEEEEEEECC
T ss_pred EEEECCCEEEEEEEcCCCC----ceeeecccccccc-----CCCC--------------cceee--eCCCCEEEEEEeCC
Confidence 8899999999999994321 1145555554321 1111 11222 67999999999999
Q ss_pred CceeeEEeeec---chhhhcccEEEEecccc
Q 008038 528 NPGAWAFHCHI---EPHFHIGMGVVLALGVE 555 (580)
Q Consensus 528 npG~w~~HCHi---l~H~d~GM~~~~~~~~~ 555 (580)
+||.|+||||. ..|++.||++.+.+.++
T Consensus 115 ~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 115 QPGLYIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred CCeEEEEECCCCChHHHHhCCCEEEEEEECC
Confidence 99999999994 56999999999987653
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.15 E-value=3e-11 Score=107.09 Aligned_cols=84 Identities=25% Similarity=0.341 Sum_probs=64.7
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
++++.|+.++|.+.|.... ...|.||+||..+.+ .+ ..+ ..|.||+..+++|+++
T Consensus 67 I~v~~Gd~v~v~~~N~~~~----~h~h~ih~hg~~~~~----~g-------~~~----------~~I~PG~t~ty~f~a~ 121 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATN----AMPHNVEFHGATGAL----GG-------AKL----------TNVNPGEQATLRFKAD 121 (159)
T ss_dssp EEEETTCEEEEEEEECTTC----CSCBCCEETTSCSGG----GG-------GGG----------CCBCTTEEEEEEEECC
T ss_pred EEEECCcEEEEEEECCCcc----ccccceeeccccCCC----CC-------ccc----------ccCCCCCeEEEEEEcC
Confidence 8899999999999996432 125788888864211 00 001 1378999999999999
Q ss_pred CceeeEEeee----cchhhhcccEEEEeccccc
Q 008038 528 NPGAWAFHCH----IEPHFHIGMGVVLALGVET 556 (580)
Q Consensus 528 npG~w~~HCH----il~H~d~GM~~~~~~~~~~ 556 (580)
.||.|.|||| +..|...||.+.|.+.+++
T Consensus 122 ~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e 154 (159)
T d1oe2a1 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (159)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred CCceEEEEeCCCCCchhHHhCCCEEEEEEECCC
Confidence 9999999999 6789999999999886643
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=8.1e-11 Score=106.08 Aligned_cols=93 Identities=11% Similarity=0.094 Sum_probs=73.5
Q ss_pred ceEEeCccCCCCccccccccCCCcccccccCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCccc
Q 008038 196 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 275 (580)
Q Consensus 196 ~~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v 275 (580)
..++|||+.+.. ..+.++++.|+++||||+|.+....|.|||+|+.|+|++.+|.+.
T Consensus 71 ~~~tING~~f~~-----------------------~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~ 127 (181)
T d1kv7a3 71 HANKINGQAFDM-----------------------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPP 127 (181)
T ss_dssp GCEEETTBCCCT-----------------------TCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCC
T ss_pred cceeECCEecCC-----------------------CCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCc
Confidence 568999998751 123589999999999999998766799999999999999999977
Q ss_pred C---ceeeeeEEEcCCceEEEEEEe--CCCCCcceEEEEeec
Q 008038 276 Q---PFEVDDMDIYSGESYSVLLTT--NQDPSYNYWISAGVR 312 (580)
Q Consensus 276 ~---P~~~d~v~l~pGeR~dv~v~~--~~~~~g~y~l~~~~~ 312 (580)
. +...|+|.|.+++ ..++|.+ +.+.+|.|.+|||.+
T Consensus 128 ~~~~~~~kDTv~v~~~~-~~v~v~f~~~~~~~G~w~fHCHil 168 (181)
T d1kv7a3 128 AAHRAGWKDTVKVEGNV-SEVLVKFNHDAPKEHAYMAHCHLL 168 (181)
T ss_dssp CGGGSSSBSEEEESSSE-EEEEECCCSCCCGGGCEEEEESSH
T ss_pred cccCCcceeEEEeCCCc-eEEEEEEEeeCCCCCeEEEeCChH
Confidence 4 4567999997764 3444444 443358899999964
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.02 E-value=1.5e-10 Score=100.59 Aligned_cols=98 Identities=17% Similarity=0.060 Sum_probs=68.5
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEee-------cCCCCCcccccccCC-CCCCccceEEeCCCcE
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR-------GEGKFTKEDEKKFNL-KNPPLKNTAVIFPYGW 519 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~-------~~g~~~~~~~~~~~~-~~p~~rDTv~vpp~g~ 519 (580)
+.++.|+.|+|+|.|.+.+ .||.+++...+..... ..+.. ....+.. ....+.+|..+.|++.
T Consensus 34 i~v~aG~~V~~~~~N~~~~------~~~Hn~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~v~~~t~~~~pg~s 104 (139)
T d1qhqa_ 34 LSLPANTVVRLDFVNQNNL------GVQHNWVLVNGGDDVAAAVNTAAQNNAD---ALFVPPPDTPNALAWTAMLNAGES 104 (139)
T ss_dssp EEEETTCEEEEEEEECCSS------CCCBCCEEESSSHHHHHHHHHHHHTCGG---GTTCCCTTCTTEEEECCCBCTTEE
T ss_pred EEECCCCEEEEEEeCCccc------ceeEEEeecccchhhHHHHHHhhhccch---hccccCCCcccccccccccCCcce
Confidence 8899999999999998766 5554443222211000 00000 0000111 1234678889999999
Q ss_pred EEEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 520 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 520 v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
..|+|+++.||.|.||||+..|.+.||.+.|.|.|
T Consensus 105 ~~i~f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 105 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEEecCCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 99999999999999999999999999999998754
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=2.3e-09 Score=92.36 Aligned_cols=85 Identities=22% Similarity=0.332 Sum_probs=67.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++.++.|+.|++.+.|.... .|.||+||... -...+|. + ...++||+..+.+|.+
T Consensus 47 ~i~~~~Gd~v~v~~~N~l~~------~~siH~HG~~~--~~~~dG~-------------~----~~~i~pg~~~~y~~~~ 101 (140)
T d1kv7a1 47 AVKLQRGKAVTVDIYNQLTE------ETTLHWHGLEV--PGEVDGG-------------P----QGIIPPGGKRSVTLNV 101 (140)
T ss_dssp EEEEETTCEEEEEEEECSSS------CBCCEEETCCC--CGGGSCC-------------T----TCCBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEeCccc------cccEeeeeeec--CCccCCC-------------c----cceEccCCceeEEEEE
Confidence 49999999999999998776 89999999754 2221221 0 1237899999999999
Q ss_pred cCc-eeeEEeeec----chhhhcccEEEEeccccc
Q 008038 527 DNP-GAWAFHCHI----EPHFHIGMGVVLALGVET 556 (580)
Q Consensus 527 dnp-G~w~~HCHi----l~H~d~GM~~~~~~~~~~ 556 (580)
+++ |.|.||||. ..|...||++.+.+.+++
T Consensus 102 ~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 102 DQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 875 999999995 478899999999877654
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.92 E-value=1.6e-09 Score=93.95 Aligned_cols=92 Identities=17% Similarity=0.184 Sum_probs=66.8
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCC--Cceeeeecccccc-----------C-CCCCCCCCCC-----ccccCCCCCeEEE
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYT--EGVVIHWHGIRQL-----------G-TPWADGTASI-----SQCPINPGETYLY 119 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~--~~~siH~HG~~~~-----------~-~~~~DG~~~~-----~q~~i~pG~~~~y 119 (580)
|--..|+|++||+|+++++|. .. .+++++....... + .....-.|.. .-..+.||++.++
T Consensus 29 F~p~~i~v~aG~~V~~~~~N~-~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i 107 (139)
T d1qhqa_ 29 FAQTSLSLPANTVVRLDFVNQ-NNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 107 (139)
T ss_dssp BSCSEEEEETTCEEEEEEEEC-CSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred EcCCeEEECCCCEEEEEEeCC-cccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEE
Confidence 445789999999999999998 43 4566655432110 0 0011111211 1245799999999
Q ss_pred EEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 120 RFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 120 ~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
.|++.++|+||||||...|...||.|.|+|.|
T Consensus 108 ~f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 108 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEecCCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 99999999999999999999999999999975
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.91 E-value=6.5e-10 Score=94.71 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=67.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEE-
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV- 525 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~- 525 (580)
+++++.|+.+++.|.|.... ......|.+|+||..+..-...++ ...-....|+||+..+.+|+
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~-~~~~~~tsiH~HGl~~~~~~~~dg--------------v~g~~~~~I~PG~~~~y~~~~ 99 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDN-PTMLRPTSIHWHGLFQRGTNWADG--------------ADGVNQCPISPGHAFLYKFTP 99 (131)
T ss_dssp EEEEETTCCEEEEEEECCCC-TTSCCSBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTCEEEEEECC
T ss_pred eEEEECCCEEEEEEEECCCC-ccccccceEEeCCcccCCCCCCCC--------------CcccccceECCCCeEEEEEeC
Confidence 49999999999999995432 011236899999965411111010 00111245889999999999
Q ss_pred ecCceeeEEeeecchhhhcccEEEEecccc
Q 008038 526 ADNPGAWAFHCHIEPHFHIGMGVVLALGVE 555 (580)
Q Consensus 526 adnpG~w~~HCHil~H~d~GM~~~~~~~~~ 555 (580)
++.+|.|.||||...|...||.+.+.+.++
T Consensus 100 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 129 (131)
T d1hfua1 100 AGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129 (131)
T ss_dssp TTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCcceEEEecCCHHHHhCCCEEEEEEcCC
Confidence 578999999999999999999999987653
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.90 E-value=7.7e-09 Score=90.06 Aligned_cols=146 Identities=13% Similarity=0.069 Sum_probs=109.5
Q ss_pred CCCCCCCcceEEEEeecccCchH-----------HHHhhhcCCCCCCCCCCceEEeCccCCCCccccccccCCCcccccc
Q 008038 156 KEPFHYDGEFNLLLSDWWHRSVH-----------EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKL 224 (580)
Q Consensus 156 ~~p~~~d~e~~l~~~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~~~~ 224 (580)
..|+.||++++++-+|+|...+. +...... .-+. ...|++..+||+..- ++
T Consensus 6 g~~l~yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~-e~m~-~l~PthVVFNG~vga-------lt--------- 67 (178)
T d1mzya2 6 GKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMV-AVMD-TLIPSHIVFNGAVGA-------LT--------- 67 (178)
T ss_dssp SCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHH-HHHT-TTCCSEEEETTSTTT-------TS---------
T ss_pred CCccccCeEEEEecceeecCCCCCCCccccCChhhcchhHH-HHHH-ccCCCEEEECCccCc-------cc---------
Confidence 46789999999999999963221 0000000 0011 236899999999766 11
Q ss_pred cCCCCCCceEEEEecCCEEEEEEeecCCceeEEEEEeCeeeEEEEECCcccC-c-eeeeeEEEcCCceEEEEEEeCCCCC
Q 008038 225 RGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-P-FEVDDMDIYSGESYSVLLTTNQDPS 302 (580)
Q Consensus 225 ~~~~~~~~~~~~v~~Ge~~rlRliNag~~~~~~~~i~gh~~~via~DG~~v~-P-~~~d~v~l~pGeR~dv~v~~~~~~~ 302 (580)
....++++.||+| +|+|++.++.-+||+-|..|..|-.+|.+.. | ..+.++.|.+|+..-+++++++ +
T Consensus 68 ------g~~aL~AkvGEtV--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~--P 137 (178)
T d1mzya2 68 ------GEGALKAKVGDNV--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ--P 137 (178)
T ss_dssp ------GGGCEEEETTCEE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS--C
T ss_pred ------CCCCcccccCCeE--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC--C
Confidence 1125999999987 5799999999999999999988888999885 4 4689999999999999999998 8
Q ss_pred cceEEEEeecCCCCCCCCceEEEEecCC
Q 008038 303 YNYWISAGVRGRKPATPPALTLLNYHPT 330 (580)
Q Consensus 303 g~y~l~~~~~~~~~~~~~~~ail~y~~~ 330 (580)
|.|.+..|.+.+. -...+.|+|.+.+.
T Consensus 138 G~Y~~VdH~l~~A-~~kGA~g~l~V~G~ 164 (178)
T d1mzya2 138 GVYAYVNHNLIEA-VHKGATAHVLVEGE 164 (178)
T ss_dssp EEEEEEESSHHHH-HTTCCEEEEEEESC
T ss_pred eEEEEEccHHHHH-HhCCCeEEEEeCCC
Confidence 9999988865432 13567899999853
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.84 E-value=3.7e-09 Score=87.70 Aligned_cols=73 Identities=21% Similarity=0.384 Sum_probs=61.2
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|+.|+|++.|.+.. .|+||+|++.. +..+.||+...++|++
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~------~H~~~i~~~~~---------------------------~~~~~pG~t~~~~f~~ 85 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPI------SEGFSIDAFGV---------------------------QEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEeCCCC------ceeeeeccccc---------------------------ccccCCcceEEEEEEe
Confidence 38999999999999998766 89999998643 2346789999999999
Q ss_pred cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|.||||+-.| ..||.+.|.|.
T Consensus 86 ~~~G~y~y~C~~~~~-~~~M~G~i~V~ 111 (112)
T d1ibya_ 86 DKAGAFTIWCQLHPK-NIHLPGTLNVV 111 (112)
T ss_dssp CSCEEEEEBCSSSCT-TTBCCEEEEEE
T ss_pred ccceEEEEECcccCh-hhcCeEEEEEE
Confidence 999999999998544 47799988663
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.81 E-value=4.3e-09 Score=89.50 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=66.0
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.++++.|+.|++.+.|.... ......|.+|+||... -....+ + .+.......|.||+....+|++
T Consensus 35 tI~~~~GD~v~v~~~N~~~~-~~~~~~~~iH~HG~~~--~~~~~~--d----------~~~~~s~~~i~PG~s~~Y~~~~ 99 (130)
T d1gyca1 35 LITGKKGDRFQLNVVDTLTN-HTMLKSTSIHWHGFFQ--AGTNWA--D----------GPAFVNQCPIASGHSFLYDFHV 99 (130)
T ss_dssp CEEEETTCEEEEEEEECCCC-GGGCSCBCEEEETCCC--TTCGGG--S----------CCBTTTBCCBCTTEEEEEEEEC
T ss_pred eEEEECCeEEEEEEEecCCC-cccCCceeEEeccccc--cccCCC--C----------CccccccCCCCCCCeEEEEEEC
Confidence 48999999999999996431 0112367889999654 111110 0 0011112358999999999997
Q ss_pred -cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 -DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 -dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.+|.|+||||...|...||.+.+.+.
T Consensus 100 ~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 127 (130)
T d1gyca1 100 PDQAGTFWYHSHLSTQYCDGLRGPFVVY 127 (130)
T ss_dssp SSCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred CCCCceeEEecCCHHHHhCCCEEEEEEe
Confidence 579999999999999999999988664
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=2.1e-09 Score=97.95 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=70.7
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++.++.|+++.++|.|.... +|+||.||..+.....+....+. .....+.+..|+||+..+.+|.+
T Consensus 77 ~Ira~~GD~v~V~~~N~~~~------p~siH~HG~~~~~~~~g~~~~dg--------~~~~~~~~~~v~PG~t~tY~~~~ 142 (192)
T d2j5wa1 77 IIKAETGDKVYVHLKNLASR------PYTFHSHGITYYKEHEGAIYPDN--------TTDFQRADDKVYPGEQYTYMLLA 142 (192)
T ss_dssp CEEEETTCEEEEEEEEESSS------CBCCEESSSBCCGGGCCCCSCCC--------CCGGGTGGGCBCTTCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCC------CcceeccCcccCCcccccccCCC--------CCCCCcccCcccCCCEEEEEEEc
Confidence 49999999999999997666 89999999987543322211110 11234455679999999999998
Q ss_pred c----------CceeeEEeeecch--hhhcccEEEEeccc
Q 008038 527 D----------NPGAWAFHCHIEP--HFHIGMGVVLALGV 554 (580)
Q Consensus 527 d----------npG~w~~HCHil~--H~d~GM~~~~~~~~ 554 (580)
. ++|.|+||||+.. |...||++.|.+-+
T Consensus 143 ~~~~~p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~ 182 (192)
T d2j5wa1 143 TEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICK 182 (192)
T ss_dssp CSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEEC
T ss_pred cCccccccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEcc
Confidence 5 3689999999754 88999999997743
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.75 E-value=3.6e-08 Score=86.47 Aligned_cols=100 Identities=17% Similarity=0.125 Sum_probs=76.3
Q ss_pred eEEEEEcCCCC-C-CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCC---------------CCCCCCC--------
Q 008038 50 SIVMGINGQFP-G-PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT---------------PWADGTA-------- 104 (580)
Q Consensus 50 ~~~~~~NG~~p-g-P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~---------------~~~DG~~-------- 104 (580)
+.+|++||+.= - .+..++.|++.+.++.|. ...++.+|.||.++..- ...++..
T Consensus 27 ~~~~~ing~~~~~~~~~~~~~G~~e~W~i~N~-~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (154)
T d1gska3 27 RPVLLLNNKRWHDPVTETPKVGTTEIWSIINP-TRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEK 105 (154)
T ss_dssp CEEEEETTBCTTSCCCBCCBTTCEEEEEEEEC-SSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGS
T ss_pred CceEEECCcCcCCCcccccCCCCEEEEEEEeC-CCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccC
Confidence 45799999633 3 457789999999999998 78899999999765210 0001100
Q ss_pred C-CccccCCCCCeEEEEEEc-CCCcceeeecCcchhhccccEEEEEEE
Q 008038 105 S-ISQCPINPGETYLYRFKV-DKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 105 ~-~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+ -.-..|+||+..+.+|+. +.+|.|.||||...+...||.+.+-|.
T Consensus 106 ~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 106 GWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp SCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred cccccEEeCCCCEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 0 012358899999999985 899999999999999999999999885
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.70 E-value=2e-08 Score=91.63 Aligned_cols=87 Identities=23% Similarity=0.362 Sum_probs=66.0
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC-CC-------ccccCCCC-CeEEEEEEcCCCcceeee
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA-SI-------SQCPINPG-ETYLYRFKVDKAGTYFYH 132 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~-~~-------~q~~i~pG-~~~~y~f~~~~~Gt~wYH 132 (580)
.++.+..++.++|++.|. ..+.+|.||..+... ..+|.+ .. .-..|+|| ++..++|.++.+|.|.||
T Consensus 72 ~~~~~~~~~~~~i~~~~~---~~HP~HlHG~~F~Vl-~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~H 147 (190)
T d1v10a3 72 AVISLPANQVIEISIPGG---GNHPFHLHGHNFDVV-RTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLH 147 (190)
T ss_dssp TEEEECTTCEEEEEEECC---BSCEEEESSCCEEEE-ECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEE
T ss_pred eeEEccCccEEEEEeccC---ccccccccCceEEEE-EcCCCcccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEe
Confidence 468999999999998886 479999999876321 112211 11 11346675 567899999999999999
Q ss_pred cCcchhhccccEEEEEEEcC
Q 008038 133 GHLGMQRSAGLYGSLIVDVA 152 (580)
Q Consensus 133 ~H~~~~~~~Gl~G~liV~~~ 152 (580)
||...+...||...|++.+.
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 99999999999999988654
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.67 E-value=4.3e-08 Score=89.77 Aligned_cols=90 Identities=18% Similarity=0.311 Sum_probs=68.7
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC-------C-ccccC-CCCCeEEEEEEcCCCcceee
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS-------I-SQCPI-NPGETYLYRFKVDKAGTYFY 131 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~-------~-~q~~i-~pG~~~~y~f~~~~~Gt~wY 131 (580)
+.+|+++.|+.+++.+.|.....++.+|+||.....- ..+|.+. . .-..| ++|+...++|.++.+|.|.|
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl-~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~ 147 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFF 147 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEE-ECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEE-eccCCCCCccccCcccceEEeCCCCEEEEEEEECCCCeeeEE
Confidence 3579999999999999999455689999999775321 1122110 0 11235 46788999999999999999
Q ss_pred ecCcchhhccccEEEEEEEc
Q 008038 132 HGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 132 H~H~~~~~~~Gl~G~liV~~ 151 (580)
|||...+...||...|++.+
T Consensus 148 HCHi~~H~~~GM~~~~~~~~ 167 (200)
T d1hfua3 148 HCHIEFHLMNGLAIVFAEDM 167 (200)
T ss_dssp EESSHHHHHTTCEEEEEECH
T ss_pred EeCCChHHhCCCcEEEEEcC
Confidence 99999999999998887765
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.64 E-value=2.8e-08 Score=84.82 Aligned_cols=93 Identities=18% Similarity=0.290 Sum_probs=66.8
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++.++.|+.+++.+.|.... ......+.+|+||... -....+ + ....-....|+||+..+.+|++
T Consensus 35 ~i~~~~GD~v~v~~~N~l~~-~~~~~~tsiH~HGl~~--~~~~~~-----d-------gv~~~t~~~I~PG~~~~Y~~~~ 99 (136)
T d1v10a1 35 LITGNIDDRFQINVIDQLTD-ANMRRATSIHWHGFFQ--AGTTEM-----D-------GPAFVNQCPIIPNESFVYDFVV 99 (136)
T ss_dssp CEEEETTCEEEEEEEECCCC-TTSCCCBCEEEETCCC--TTCGGG-----S-------CCBTTTBCCBCTTEEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCC-cccCcceeEEeccccc--cccccc-----C-------CCCccccceECCCCeEEEEEEC
Confidence 49999999999999995431 0112367899999533 111100 0 0011123458999999999998
Q ss_pred c-CceeeEEeeecchhhhcccEEEEeccc
Q 008038 527 D-NPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 527 d-npG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
. .+|.|.||||...|...||.+.+.+.+
T Consensus 100 ~~~~Gt~wYH~H~~~q~~~GL~G~liV~~ 128 (136)
T d1v10a1 100 PGQAGTYWYHSHLSTQYCDGLRGAFVVYD 128 (136)
T ss_dssp TTCCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred CCCccceEEecCchhHHhCCCEEEEEECC
Confidence 4 699999999999999999999997754
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.62 E-value=2.4e-08 Score=92.34 Aligned_cols=91 Identities=22% Similarity=0.289 Sum_probs=69.4
Q ss_pred eEEecCCCEEEEEEEeCC-----CCCceeeeeccccccCCCCCCCC-------------CCC-ccccCCCCCeEEEEEEc
Q 008038 63 TIRARAGDTIAVELTNKL-----YTEGVVIHWHGIRQLGTPWADGT-------------ASI-SQCPINPGETYLYRFKV 123 (580)
Q Consensus 63 ~l~v~~Gd~v~v~v~N~l-----~~~~~siH~HG~~~~~~~~~DG~-------------~~~-~q~~i~pG~~~~y~f~~ 123 (580)
+++++.|+.|+|.+.|.- ....+.+|+||.+...-...+|. |.. .-..|+||+..+.+|++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 689999999999999962 24579999999765210001111 100 12457899999999999
Q ss_pred CCCcceeeecCcchhhccccEEEEEEEcCC
Q 008038 124 DKAGTYFYHGHLGMQRSAGLYGSLIVDVAD 153 (580)
Q Consensus 124 ~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~ 153 (580)
+.+|.|.||||...+...||...|++.+.+
T Consensus 160 dnpG~w~~HCH~~~H~~~GM~~~~~v~~~~ 189 (214)
T d1aoza3 160 DNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 189 (214)
T ss_dssp CSCEEEEEEESSHHHHHTTCEEEEEECGGG
T ss_pred CCCeeEEEEECcHHHHhCcCcEEEEEcccc
Confidence 999999999999999999999998886543
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.53 E-value=1.7e-07 Score=85.66 Aligned_cols=91 Identities=24% Similarity=0.280 Sum_probs=67.5
Q ss_pred CCeEEecCCCEEEEEEEeCC--CCCceeeeeccccccCCCCCCCCCCC--------c--cccCCCCCeEEEEEEcCCCcc
Q 008038 61 GPTIRARAGDTIAVELTNKL--YTEGVVIHWHGIRQLGTPWADGTASI--------S--QCPINPGETYLYRFKVDKAGT 128 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l--~~~~~siH~HG~~~~~~~~~DG~~~~--------~--q~~i~pG~~~~y~f~~~~~Gt 128 (580)
+.++.+..++.++|.+.|.- ....+.+|.||.....-...++.... + -..++||+..+++|.++.+|.
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~ 148 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGP 148 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEECCCCee
Confidence 34578999999999998752 23469999999875321122222211 1 123478999999999999999
Q ss_pred eeeecCcchhhccccEEEEEEEc
Q 008038 129 YFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 129 ~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
|.||||...+...||...|++.+
T Consensus 149 w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 149 WFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEESSHHHHHTTCEEEEEETH
T ss_pred EEEEcCchhhHhccCcEEEEEcC
Confidence 99999999999999998876544
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.46 E-value=3e-07 Score=77.98 Aligned_cols=77 Identities=22% Similarity=0.199 Sum_probs=61.0
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|+|.|.|.+.. .|.+|-| .|-+. .-...+.||....++|+++
T Consensus 54 i~V~~Gd~V~~~ltN~d~~------~~v~H~~----~i~~~--------------------~~~~~~~PG~~~~~~F~a~ 103 (132)
T d1fwxa1 54 FTVKEGDEVTVIVTNLDEI------DDLTHGF----TMGNY--------------------GVAMEIGPQMTSSVTFVAA 103 (132)
T ss_dssp EEEETTCEEEEEEEECCCS------TTCCEEE----EETTT--------------------TEEEEECTTCEEEEEEECC
T ss_pred EEEcCCCEEEEEEEcCCCC------ccceEee----chhhh--------------------ccccccCCCEEEEEEEeCC
Confidence 8899999999999998765 5666554 22111 1234678899999999999
Q ss_pred CceeeEEeeecchhhh-cccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFH-IGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d-~GM~~~~~~~~ 554 (580)
+||.|.||||..-|.. .||.+.+.|.|
T Consensus 104 ~~G~y~~~C~~~cg~~H~~M~G~iiVeP 131 (132)
T d1fwxa1 104 NPGVYWYYCQWFCHALHMEMRGRMLVEP 131 (132)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCeEEEEECccccCcchhcCEEEEEEEc
Confidence 9999999999877764 79999998765
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.44 E-value=1.3e-07 Score=76.10 Aligned_cols=82 Identities=27% Similarity=0.353 Sum_probs=54.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|++++||+| ++.|. ...++.++.+..........++... ......|+.+ |+|+...+|+|||+|.. |..
T Consensus 17 P~~i~v~~GdtV--~f~n~-~~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t--~~~tf~~~G~y~y~C~~--H~~ 88 (98)
T d2plta_ 17 PKTLTIKSGETV--NFVNN-AGFPHNIVFDEDAIPSGVNADAISR-DDYLNAPGET--YSVKLTAAGEYGYYCEP--HQG 88 (98)
T ss_dssp SSEEEECTTCEE--EEEEC-SSCCEEEEECGGGSCTTCCHHHHCE-EEEECSTTCE--EEEECCSCEEEEEECGG--GGG
T ss_pred CCEEEECCCCEE--EEEEC-CCCceeEEEecCCccccccCCcccc-cccccCCCce--EEEEecCCceEEEEeCc--CCC
Confidence 369999999985 56687 5667777777654322111111111 1223345555 55556889999999963 888
Q ss_pred cccEEEEEEE
Q 008038 141 AGLYGSLIVD 150 (580)
Q Consensus 141 ~Gl~G~liV~ 150 (580)
.||.|.|+|+
T Consensus 89 ~GM~G~I~Ve 98 (98)
T d2plta_ 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 9999999996
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.40 E-value=1.4e-07 Score=84.49 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=66.1
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
+++++.|+.|.++|.|.... ++.+|.||..+.....+....+.. .+.-.-...|+||++.+.+|.+
T Consensus 61 ~Ira~~GD~i~V~f~N~~~~------~~siH~HG~~~~~~~~~~~~~d~~--------~~~~~~~~~V~PGet~tY~w~v 126 (180)
T d1sdda1 61 TLYAEVGDIMKVHFKNKAHK------PLSIHAQGIKYSKFSEGASYSDHT--------LPMEKMDDAVAPGQEYTYEWII 126 (180)
T ss_dssp CEEEETTCEEEEEEEECSSS------CBCCEEESSCCCTTTSCCCSCCCC--------CHHHHTTTCBCTTCEEEEEEEC
T ss_pred eEEEECCcEEeeEEEeCCCC------CccccccccccccccccccccccC--------CCCCccccccCCCCEEEEEEEe
Confidence 59999999999999997655 899999998763322211111100 0001111248999999999998
Q ss_pred cC----------ceeeEEeeecch--hhhcccEEEEeccc
Q 008038 527 DN----------PGAWAFHCHIEP--HFHIGMGVVLALGV 554 (580)
Q Consensus 527 dn----------pG~w~~HCHil~--H~d~GM~~~~~~~~ 554 (580)
+. .|.|+||||... |...||++.|.+-.
T Consensus 127 ~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~ 166 (180)
T d1sdda1 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICK 166 (180)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEEC
T ss_pred CCcccCccCCCCCEEEEEecCCCcHHHhhCCceEEEEEcc
Confidence 52 489999999755 77889999997643
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.28 E-value=2.3e-07 Score=74.63 Aligned_cols=81 Identities=27% Similarity=0.404 Sum_probs=54.4
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC--CCccccCCCCCeEEEEEEcCCCcceeeecCcc
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA--SISQCPINPGETYLYRFKVDKAGTYFYHGHLG 136 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~--~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~ 136 (580)
|-.+.|++++||+|+ ++|. ...++++........ .+... ......+.+|++++|.| ..+|+|+|+|..
T Consensus 16 F~P~~i~v~~GdtV~--~~n~-~~~~H~~~~~~~~~~----~~~~~~~~~~~~~~~~g~t~~~tf--~~~G~y~Y~C~~- 85 (98)
T d1pcsa_ 16 FEPSTVTIKAGEEVK--WVNN-KLSPHNIVFDADGVP----ADTAAKLSHKGLLFAAGESFTSTF--TEPGTYTYYCEP- 85 (98)
T ss_dssp EESSEEEECTTCEEE--EEEC-SSCCEEEEECCSSSC----HHHHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECGG-
T ss_pred EeCCEEEECCCCEEE--EeEC-CCCccceEEeccccC----CCccccccccccccCCCcEEEEec--cCCceEEEEecc-
Confidence 334799999999855 5577 556676655432110 00000 11223467899888877 689999999953
Q ss_pred hhhccccEEEEEEE
Q 008038 137 MQRSAGLYGSLIVD 150 (580)
Q Consensus 137 ~~~~~Gl~G~liV~ 150 (580)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 86 -HRGAGMVGKVVVE 98 (98)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -CCCCCCEEEEEEC
Confidence 8888999999995
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.27 E-value=1.2e-06 Score=80.84 Aligned_cols=89 Identities=19% Similarity=0.268 Sum_probs=61.8
Q ss_pred eEEecCCCEEEEEEEeCC----CCCceeeeeccccccCCCCCCCC-----------------------CC-CccccCCCC
Q 008038 63 TIRARAGDTIAVELTNKL----YTEGVVIHWHGIRQLGTPWADGT-----------------------AS-ISQCPINPG 114 (580)
Q Consensus 63 ~l~v~~Gd~v~v~v~N~l----~~~~~siH~HG~~~~~~~~~DG~-----------------------~~-~~q~~i~pG 114 (580)
.+++...+..++.+.+.. ...++.+|+||..+..-....|. |. -.-..|+||
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~ 141 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 141 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCC
Confidence 456777666665555432 23469999999875210001110 11 011457899
Q ss_pred CeEEEEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 115 ETYLYRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 115 ~~~~y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
+..+.+|.++.+|.|.||||...+...||...++.++
T Consensus 142 g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 142 GWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp SEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECCCCeEEEEEccCCcccccCCeEEEEEcc
Confidence 9999999999999999999999999999998886654
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.19 E-value=6e-07 Score=73.14 Aligned_cols=86 Identities=29% Similarity=0.393 Sum_probs=60.3
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC--CCccccCCCCCeEEEEEEc-CCCcceeeecCc
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA--SISQCPINPGETYLYRFKV-DKAGTYFYHGHL 135 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~--~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H~ 135 (580)
|-...|++++||+|+ +.|. ...+++++......... ...+.+ ......+.||+++.+.|.. ..+|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~-~~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNN-KLPPHNILFDDKQVPGA-SKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEEC-SSCCEEEEECGGGSGGG-CHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST
T ss_pred EeCCEEEECCCCEEE--EEEC-CCCCceeEeecCccccc-ccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC
Confidence 334689999999865 6787 56677776664432110 000000 1123467899999999987 789999999974
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
|...||.|.|+|+
T Consensus 92 --H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 92 --HRGAGMVGKITVE 104 (105)
T ss_dssp --TGGGTCEEEEEEC
T ss_pred --CCCCCCEEEEEEc
Confidence 8888999999997
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=7.9e-07 Score=81.14 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=64.9
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
++.++.|+++++.|.|.... ++.+|.||..+.--. +|..-. +... ....+.......|.||+..+.+|.+
T Consensus 87 ~Ira~~GD~v~V~~~N~~~~------p~siH~HG~~~~~~~--dg~~~~-~~~~-~~~~~~~~~~~~V~PGet~tY~w~v 156 (207)
T d2j5wa3 87 VIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNKNN--EGTYYS-PNYN-PQSRSVPPSASHVAPTETFTYEWTV 156 (207)
T ss_dssp CEEEETTEEEEEEEEECSSS------CBCCEEESSBCCGGG--CSBCCB-CC--------CCCCSSCBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEECCCC------CccccccccccCccc--cccccc-CCCC-cccCCcCcccceecCCCEEEEEEEe
Confidence 49999999999999997665 899999999763322 221100 0000 0001112223458899999999998
Q ss_pred cCce----------eeEEeeecchhh--hcccEEEEec
Q 008038 527 DNPG----------AWAFHCHIEPHF--HIGMGVVLAL 552 (580)
Q Consensus 527 dnpG----------~w~~HCHil~H~--d~GM~~~~~~ 552 (580)
...+ .|+||||..... ..||.+.|.+
T Consensus 157 ~~~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV 194 (207)
T d2j5wa3 157 PKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 194 (207)
T ss_dssp CGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEE
T ss_pred cCCCCCccCCCCceeEEEccCCChhHhhccCceEEEEE
Confidence 6543 799999986655 6799999976
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.18 E-value=3e-07 Score=74.59 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=48.7
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCC--CCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcch
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPW--ADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGM 137 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~--~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~ 137 (580)
-.+.|++++||+|+ ++|. ...++++.+--........ ...........+.++...+|.|+..++|+|||+|..
T Consensus 15 ~P~~l~v~~GdtV~--f~n~-~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~G~y~Y~C~~-- 89 (102)
T d1kdja_ 15 YPDSITVSAGEAVE--FTLV-GETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYCTP-- 89 (102)
T ss_dssp ESSEEEECTTCCEE--EEEC-SSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEECST--
T ss_pred eCCEEEECCCCEEE--EEEC-CCCceeEEEecCCCCCcccccccccCcccccccccCCccEEEEeeCCCceEEEEecC--
Confidence 34799999999865 5677 4444443332100000000 000000011123334444555555789999999974
Q ss_pred hhccccEEEEEEE
Q 008038 138 QRSAGLYGSLIVD 150 (580)
Q Consensus 138 ~~~~Gl~G~liV~ 150 (580)
|...||.|.|+|+
T Consensus 90 H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 90 HKSANMKGTLTVK 102 (102)
T ss_dssp TGGGTCEEEEEEC
T ss_pred CcccCCeEEEEEC
Confidence 8889999999995
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.16 E-value=2.6e-06 Score=69.19 Aligned_cols=77 Identities=23% Similarity=0.404 Sum_probs=54.7
Q ss_pred CCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcch
Q 008038 58 QFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGM 137 (580)
Q Consensus 58 ~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~ 137 (580)
+|-.++|++++||+|. ++|+ ...+|++++..-. ++........+.+|++++|.| .++|+|.|+|-..
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~-d~~~H~v~~~~~~-------~~~~~~~~~~~~~g~~~~~tf--~~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINR-EAMPHNVHFVAGV-------LGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEEC-SSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEEC-CCCceeEEEeccc-------CCcccccccccCCCceEEEEe--cCCeEEEEEecCC-
Confidence 4556799999999865 6788 5677777654321 111122334578899988888 6899999999431
Q ss_pred hhccccEEEEEEE
Q 008038 138 QRSAGLYGSLIVD 150 (580)
Q Consensus 138 ~~~~Gl~G~liV~ 150 (580)
.||.|.|+|+
T Consensus 96 ---~~M~G~I~Ve 105 (105)
T d2ov0a1 96 ---PFMRGKVVVE 105 (105)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCCEEEEEEC
Confidence 4899999985
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.15 E-value=1.8e-06 Score=69.37 Aligned_cols=83 Identities=17% Similarity=0.156 Sum_probs=55.1
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCC-CCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGT-PWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~-~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
-...|++++||+|+ ++|. ...+|++.+........ ...++.-.-......||+++++.| .++|+|+|+|- .|
T Consensus 15 ~P~~iti~~GdtV~--f~n~-~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF--~~~G~y~Y~C~--pH 87 (99)
T d1plca_ 15 VPSEFSISPGEKIV--FKNN-AGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS--PH 87 (99)
T ss_dssp ESSEEEECTTCEEE--EEEC-SSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG--GG
T ss_pred eCCEEEECCCCEEE--EEEC-CCCCccEEEccCcCCCccccccCcccccccccCCCceEEEec--CCCceEEEEeC--CC
Confidence 34689999999864 5787 66678776553322100 000000011233567899888777 68999999994 58
Q ss_pred hccccEEEEEE
Q 008038 139 RSAGLYGSLIV 149 (580)
Q Consensus 139 ~~~Gl~G~liV 149 (580)
...||.|.|+|
T Consensus 88 ~~~GM~G~I~V 98 (99)
T d1plca_ 88 QGAGMVGKVTV 98 (99)
T ss_dssp TTTTCEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 88999999998
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.15 E-value=2.2e-06 Score=67.61 Aligned_cols=76 Identities=32% Similarity=0.517 Sum_probs=54.3
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
|-.+.|++++||+| +++|. ....+++...+.... .+ ....+.||++++|.| ..+|+|.|+|.. |
T Consensus 16 F~P~~i~I~~GdtV--~f~n~-d~~~h~~~~~~~~~~--~~-------~~~~~~~g~~~~~tF--~~~G~y~Y~C~~--H 79 (91)
T d1bxua_ 16 FEPSTIEIQAGDTV--QWVNN-KLAPHNVVVEGQPEL--SH-------KDLAFSPGETFEATF--SEPGTYTYYCEP--H 79 (91)
T ss_dssp EESSEEEECTTCEE--EEEEC-SSCCEEEEETTCGGG--CE-------EEEECSTTCEEEEEC--CSCEEEEEECTT--T
T ss_pred EECCEEEECCCCEE--EEEEC-CcCCceEEecccccc--cc-------cccccCCCCCEEEEe--ccCceEEEEeCC--C
Confidence 33589999999986 46787 555666655443211 01 123567899887766 689999999964 7
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 80 ~~~gM~G~I~Ve 91 (91)
T d1bxua_ 80 RGAGMVGKIVVQ 91 (91)
T ss_dssp GGGTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 778999999985
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.14 E-value=1.6e-06 Score=69.72 Aligned_cols=82 Identities=17% Similarity=0.164 Sum_probs=51.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCC-CCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWAD-GTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR 139 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~D-G~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~ 139 (580)
...|++++||+| +++|. ...++++.+............ +...-......|++++++.| ..+|+|||+|-. |.
T Consensus 16 P~~i~v~~GdtV--~f~n~-~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf--~~~G~y~y~C~~--H~ 88 (99)
T d1bypa_ 16 PSDLSIASGEKI--TFKNN-AGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL--TEKGTYKFYCAP--HA 88 (99)
T ss_dssp SSEEEECTTEEE--EEEEC-SSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE--CSCEEEEEECGG--GT
T ss_pred CCEEEECCCCEE--EEEEC-CCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEe--cCCceEEEEECc--CC
Confidence 478999999985 56787 555666555433221100000 00001123456677776666 689999999964 78
Q ss_pred ccccEEEEEE
Q 008038 140 SAGLYGSLIV 149 (580)
Q Consensus 140 ~~Gl~G~liV 149 (580)
..||.|.|+|
T Consensus 89 ~~GM~G~I~V 98 (99)
T d1bypa_ 89 GAGMVGKVTV 98 (99)
T ss_dssp TTTCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 8899999998
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=98.10 E-value=5.4e-06 Score=69.23 Aligned_cols=78 Identities=21% Similarity=0.279 Sum_probs=50.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
.++|++++||+|+. +|. ....+..-..+ ...++.. .....+|++++|.| +.+|+|.|+|.. |..
T Consensus 20 P~~ltV~~GDTV~f--~n~-d~~~h~~~~~~------~~~~~~~---~~~~~~~~~~~~tF--~~~G~Y~Y~C~p--H~~ 83 (123)
T d1pmya_ 20 PALVRLKPGDSIKF--LPT-DKGHNVETIKG------MAPDGAD---YVKTTVGQEAVVKF--DKEGVYGFKCAP--HYM 83 (123)
T ss_dssp SSEEEECTTCEEEE--ECS-SSSCCCEECTT------SSCTTCC---CCBCCTTSCEEEEC--CSCEEEEEECST--TTT
T ss_pred CCEEEECCCCEEEE--eeC-CCCcccccccc------cCccccc---cccccccccccccc--CCCceEEEEecc--CCC
Confidence 48999999999655 555 22222221111 1122221 23456677766555 789999999964 788
Q ss_pred cccEEEEEEEcCCC
Q 008038 141 AGLYGSLIVDVADG 154 (580)
Q Consensus 141 ~Gl~G~liV~~~~~ 154 (580)
.||.|.|+|.++.+
T Consensus 84 ~GM~G~I~Vgd~~~ 97 (123)
T d1pmya_ 84 MGMVALVVVGDKRD 97 (123)
T ss_dssp TTCEEEEEESSCCT
T ss_pred CCCEEEEEECCCCC
Confidence 99999999987543
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=98.00 E-value=1.3e-05 Score=66.60 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=56.6
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc---ch
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL---GM 137 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~---~~ 137 (580)
...|.++.|+.|+++|+|. +..|++...++. + +..+.||+.-+..|+++++|+|+|.|+. ..
T Consensus 46 p~~l~vp~G~~V~~~lts~--DV~H~f~ip~~~------------v-~~d~~PG~~~~~~~~~~~~G~y~~~C~~~CG~~ 110 (122)
T d2cuaa_ 46 PNPIEVPQGAEIVFKITSP--DVIHGFHVEGTN------------I-NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 110 (122)
T ss_dssp SSSEEEETTSEEEEEEEBS--SSCEEEEETTSS------------C-EEEECBTBCEEEEEECCSCEEEEEECCSCCSTT
T ss_pred CCEEEEeCCCEEEEEEEcC--CccceeEecCCC------------e-eEEEecCceEEEEEEeccceeEEEEehhccCCC
Confidence 4589999999999999998 333444332221 1 3457799999999999999999999983 33
Q ss_pred hhccccEEEEEEEc
Q 008038 138 QRSAGLYGSLIVDV 151 (580)
Q Consensus 138 ~~~~Gl~G~liV~~ 151 (580)
| .+|.|.|+|++
T Consensus 111 H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 111 H--QNMFGTIVVKE 122 (122)
T ss_dssp S--TTCEEEEEEEC
T ss_pred c--ccCeEEEEEEC
Confidence 4 47999999984
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=97.98 E-value=4.9e-06 Score=66.60 Aligned_cols=84 Identities=20% Similarity=0.179 Sum_probs=51.5
Q ss_pred CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 59 FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 59 ~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
|-..+|++++||+|+ ++|. ...+++.....-........++.. .......|++++++.| ..+|+|||+|-. |
T Consensus 15 F~P~~i~i~~GdtV~--f~n~-~~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f--~~~G~y~y~C~~--H 86 (98)
T d1iuza_ 15 FVPSKISVAAGEAIE--FVNN-AGFPHNIVFDEDAVPAGVDADAIS-YDDYLNSKGETVVRKL--STPGVYGVYCEP--H 86 (98)
T ss_dssp EESSEEEECTTCEEE--EEEC-SSCCEEEEECTTSSCTTCCHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECTT--T
T ss_pred EeCCEEEECCCCEEE--EEEC-CCCcccEEEeCCCccccccccccc-ccCcccCCCcEEEEec--CCCceEEEEeCC--C
Confidence 334689999999865 5676 445555444332211000000000 1123456777666555 689999999963 7
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 87 ~~~GM~G~I~Ve 98 (98)
T d1iuza_ 87 AGAGMKMTITVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred ccCCCeEEEEEC
Confidence 889999999996
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.97 E-value=7.3e-06 Score=72.34 Aligned_cols=77 Identities=17% Similarity=0.216 Sum_probs=60.6
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
+++++.|+++.++|.|.... ++.||.||... .... |- .|.||+..+.+|.+
T Consensus 87 ~IraevGD~i~V~f~N~a~~------p~SiH~HGv~~------~~~~----------------~~-~v~PGet~tY~w~v 137 (179)
T d2j5wa4 87 QLHADVGDKVKIIFKNMATR------PYSIHAHGVQT------ESST----------------VT-PTLPGETLTYVWKI 137 (179)
T ss_dssp CEEEETTEEEEEEEEECSSS------CBCCEESSCBC------SCSC----------------CC-CBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEeCCCC------CEeEeeccccC------CCCC----------------CC-cccCCccEEEEEEe
Confidence 59999999999999997765 89999999853 0000 10 27899999999998
Q ss_pred cCce----------eeEEeeecch--hhhcccEEEEec
Q 008038 527 DNPG----------AWAFHCHIEP--HFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG----------~w~~HCHil~--H~d~GM~~~~~~ 552 (580)
...+ .|+||||... |...||.+.+.+
T Consensus 138 ~~~~gp~~~d~~c~t~~YHShv~~~~d~~sGL~GplIV 175 (179)
T d2j5wa4 138 PERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIV 175 (179)
T ss_dssp CGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEE
T ss_pred cCccCCccCCCCceeEEEecCCCcHHHhhCCCeEEEEE
Confidence 5332 8999999854 777999999876
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.91 E-value=8.4e-06 Score=65.01 Aligned_cols=78 Identities=22% Similarity=0.374 Sum_probs=45.1
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCC--CccccCCCCCeEEEEEEcCCCcceeeecCcchh
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTAS--ISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQ 138 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~--~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~ 138 (580)
..+|++++||+|+.. |. ...++...+- .. +.....+. .......+++++ +|+...+|+|+|+|-. |
T Consensus 18 P~~i~V~~GdtV~f~--~~-~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~--~~tf~~~G~y~Y~C~~--H 85 (97)
T d2jxma1 18 PKALSISAGDTVEFV--MN-KVGPHNVIFD----KV-PAGESAPALSNTKLAIAPGSFY--SVTLGTPGTYSFYCTP--H 85 (97)
T ss_dssp SSEEEECTTCEEEEE--EC-SSCCCCBEEE----EC-CTTSCHHHHCBCCCCCSCSCCE--EEECCSCSEEEEECSS--T
T ss_pred CCEEEECCCCEEEEE--EC-CCcceeEEEe----cC-CCccccccccccccccCcceEE--EEecCCCeEEEEEEcc--C
Confidence 368999999997664 44 2222221111 10 01111110 011234455555 4555789999999953 7
Q ss_pred hccccEEEEEEE
Q 008038 139 RSAGLYGSLIVD 150 (580)
Q Consensus 139 ~~~Gl~G~liV~ 150 (580)
...||.|.|+|+
T Consensus 86 ~~~GM~G~I~Ve 97 (97)
T d2jxma1 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 778999999995
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.87 E-value=1.7e-05 Score=64.07 Aligned_cols=79 Identities=23% Similarity=0.368 Sum_probs=55.0
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC------CCccccCCCCCeEEEEEEc-CCCcceeeecC
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA------SISQCPINPGETYLYRFKV-DKAGTYFYHGH 134 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~------~~~q~~i~pG~~~~y~f~~-~~~Gt~wYH~H 134 (580)
..|++++||+|+ +.|. ....++.....-.. .++.. .-......|++++++.|.+ .++|+|||+|-
T Consensus 19 ~~i~v~~GdtV~--f~n~-~~~~h~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T d2cj3a1 19 AKLTIKPGDTVE--FLNN-KVPPHNVVFDAALN-----PAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 90 (105)
T ss_dssp SEEEECTTCEEE--EEEC-SSCCEEEEECSSSS-----TTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CEEEECCCCEEE--EEEC-CCCceeeEeccCCC-----CccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeC
Confidence 589999999855 5677 44455444432211 11110 0113456899999999987 78999999996
Q ss_pred cchhhccccEEEEEEE
Q 008038 135 LGMQRSAGLYGSLIVD 150 (580)
Q Consensus 135 ~~~~~~~Gl~G~liV~ 150 (580)
. |...||.|.|+|+
T Consensus 91 ~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 91 P--HRGAGMVGKITVA 104 (105)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred C--CcCCCcEEEEEEe
Confidence 4 8889999999996
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.87 E-value=2.9e-05 Score=64.64 Aligned_cols=78 Identities=19% Similarity=0.132 Sum_probs=50.9
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|++++||+|+. .|. ....+..-.++. ...+. ......++++++|.| ..+|+|+|+|-. |..
T Consensus 20 P~~itI~~GdtV~f--~n~-~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~tF--~~~G~Y~Y~C~p--H~~ 83 (123)
T d1adwa_ 20 PAFVRAEPGDVINF--VPT-DKSHNVEAIKEI-----LPEGV----ESFKSKINESYTLTV--TEPGLYGVKCTP--HFG 83 (123)
T ss_dssp SSEEEECTTEEEEE--EES-SSSCCCEECTTS-----CCTTC----CCCBCCTTCCEEEEE--CSCEEEEEECGG--GGG
T ss_pred CCEEEECCCCEEEE--EeC-CCCcceecccCc-----ccccc----ccccccCCcceEEec--cCCCeEEEEEcc--CCC
Confidence 47999999999665 566 222222211111 11111 134566777777776 689999999954 778
Q ss_pred cccEEEEEEEcCCC
Q 008038 141 AGLYGSLIVDVADG 154 (580)
Q Consensus 141 ~Gl~G~liV~~~~~ 154 (580)
.||.|.|+|.++.+
T Consensus 84 ~GM~G~I~Vg~~~~ 97 (123)
T d1adwa_ 84 MGMVGLVQVGDAPE 97 (123)
T ss_dssp GTCEEEEEESSSCT
T ss_pred CCCEEEEEECCCCC
Confidence 89999999986543
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.86 E-value=2.7e-05 Score=64.36 Aligned_cols=79 Identities=16% Similarity=0.238 Sum_probs=51.0
Q ss_pred CCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhh
Q 008038 60 PGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQR 139 (580)
Q Consensus 60 pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~ 139 (580)
-...|++++||+| +++|. . .+++++.-.- .+.+|.. .....+++++++.| +.+|+|.|+|-. |.
T Consensus 19 ~P~~itI~~GDTV--~f~n~-~-~~Hnv~~~~~-----~~~~~~~---~~~~~~~~~~s~tF--~~~G~y~Y~Ctp--H~ 82 (120)
T d1paza_ 19 EPAYIKANPGDTV--TFIPV-D-KGHNVESIKD-----MIPEGAE---KFKSKINENYVLTV--TQPGAYLVKCTP--HY 82 (120)
T ss_dssp ESSEEEECTTCEE--EEEES-S-SSCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEC--CSCEEEEEECTT--TG
T ss_pred eCCEEEECCCCEE--EEeeC-C-CcceEeeccc-----cCccccc---ccccccCceEEEEe--cCCCeEEEEEee--CC
Confidence 3478999999997 55566 2 2344443221 1122221 22334566665555 689999999964 77
Q ss_pred ccccEEEEEEEcCCC
Q 008038 140 SAGLYGSLIVDVADG 154 (580)
Q Consensus 140 ~~Gl~G~liV~~~~~ 154 (580)
..||.|.|+|.+++.
T Consensus 83 ~~GM~G~I~Vg~~~~ 97 (120)
T d1paza_ 83 AMGMIALIAVGDSPA 97 (120)
T ss_dssp GGTCEEEEEESSSCT
T ss_pred CCCCEEEEEECCCCC
Confidence 789999999997543
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.84 E-value=2.5e-05 Score=68.64 Aligned_cols=83 Identities=16% Similarity=0.205 Sum_probs=67.0
Q ss_pred EEEEEcCC---------CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeE
Q 008038 51 IVMGINGQ---------FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETY 117 (580)
Q Consensus 51 ~~~~~NG~---------~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~ 117 (580)
...++||+ -+.++|++++|+++++|++|........+|++|..+.. ...||.+ .+....|.|||++
T Consensus 35 d~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~V-ia~DG~~v~P~~~d~i~i~~GqR~ 113 (168)
T d1v10a2 35 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRY 113 (168)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred ceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEEECCCeEEE-EEeCCeecCceEEeEEEEccCceE
Confidence 36789985 23478999999999999999955567888888877654 5689976 2356789999999
Q ss_pred EEEEEc-CCCcceeeecC
Q 008038 118 LYRFKV-DKAGTYFYHGH 134 (580)
Q Consensus 118 ~y~f~~-~~~Gt~wYH~H 134 (580)
+..+++ +.+|.||.+..
T Consensus 114 dvlv~~~~~~~~y~ira~ 131 (168)
T d1v10a2 114 SVVVEANQAVGNYWIRAN 131 (168)
T ss_dssp EEEEECCSCSSEEEEEEE
T ss_pred EEEEECCCCCCcEEEEEE
Confidence 999999 56899999875
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.84 E-value=3.4e-05 Score=64.80 Aligned_cols=77 Identities=18% Similarity=0.266 Sum_probs=58.5
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|.+.+.|.... .+..|.|++.+..+. ..+.||....+.|+++
T Consensus 53 i~V~~Gd~V~~~vtn~~~s---~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~ 102 (131)
T d1qnia1 53 FKVKEGDEVTVYITNLDMV---EDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAG 102 (131)
T ss_dssp EEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECC
T ss_pred EEecCCCEEEEEEEccCCC---CcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcC
Confidence 8899999999999995321 122566666554321 2366899999999999
Q ss_pred CceeeEEeeecchhhh-cccEEEEeccc
Q 008038 528 NPGAWAFHCHIEPHFH-IGMGVVLALGV 554 (580)
Q Consensus 528 npG~w~~HCHil~H~d-~GM~~~~~~~~ 554 (580)
+||.|.+||+..-|.. .+|.+.+.|.+
T Consensus 103 ~~G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 103 KPGVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp SSEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CCEEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999999866653 68999887754
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.82 E-value=2.9e-05 Score=65.07 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=61.5
Q ss_pred CCCCeEEe-cCCCEEEEEEEeCCCCCceeeeecccccc------------------CCCCCCCCCCC--ccccCCCCCeE
Q 008038 59 FPGPTIRA-RAGDTIAVELTNKLYTEGVVIHWHGIRQL------------------GTPWADGTASI--SQCPINPGETY 117 (580)
Q Consensus 59 ~pgP~l~v-~~Gd~v~v~v~N~l~~~~~siH~HG~~~~------------------~~~~~DG~~~~--~q~~i~pG~~~ 117 (580)
+.-..|.| +.|++|+|+|+|. ...++.+=.|-+... ..-...+-+.+ ....|.||++.
T Consensus 15 f~~~~i~V~k~G~~V~l~~~N~-g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~ 93 (129)
T d2ccwa1 15 YNVKEIVVDKSCKQFTMHLKHV-GKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEEC-SCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CccceEEEecCCCEEEEEEEcC-CcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceE
Confidence 44578998 7999999999999 665533322322110 00000011111 23468999999
Q ss_pred EEEEEcC---CCcceeeecCcchhhccccEEEEEEE
Q 008038 118 LYRFKVD---KAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 118 ~y~f~~~---~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+..|++. ++|+|+|-|-...|. .||.|.|.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999993 799999999988885 7999999984
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.81 E-value=3.3e-05 Score=64.19 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=49.8
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCcchhhc
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHLGMQRS 140 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~~~~~~ 140 (580)
...|++++||+| +++|. .. .+..|..... ..+|.. .....++++++|.| ..+|+|.|+|. .|..
T Consensus 20 P~~itI~~GdTV--~w~n~-~~-~~~~~~~~~~-----~p~~~~---~~~~~~~~~~s~Tf--~~~G~Y~Y~C~--pH~~ 83 (124)
T d1bqka_ 20 PASLKVAPGDTV--TFIPT-DK-GHNVETIKGM-----IPDGAE---AFKSKINENYKVTF--TAPGVYGVKCT--PHYG 83 (124)
T ss_dssp SSEEEECTTCEE--EEECS-SS-SCCCEECTTC-----SCTTCC---CCBCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCeE--EEEEC-CC-Cccccccccc-----CCCccc---cccccCCccEEEec--CCCceEEEEec--cCcC
Confidence 478999999985 55666 22 2222222111 112221 23456677776666 68999999996 3777
Q ss_pred cccEEEEEEEcCC
Q 008038 141 AGLYGSLIVDVAD 153 (580)
Q Consensus 141 ~Gl~G~liV~~~~ 153 (580)
.||.|.|+|.+..
T Consensus 84 ~GM~G~IvVgd~~ 96 (124)
T d1bqka_ 84 MGMVGVVQVGDAP 96 (124)
T ss_dssp GTCEEEEEESSSC
T ss_pred CCCEEEEEECCCC
Confidence 8999999998643
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.77 E-value=6.8e-05 Score=62.74 Aligned_cols=92 Identities=17% Similarity=0.108 Sum_probs=63.4
Q ss_pred CCCCCeEEecCC-CEEEEEEEeCCCCCceeeeeccccc--cC-----------C-CCCCCC-CC-----CccccCCCCCe
Q 008038 58 QFPGPTIRARAG-DTIAVELTNKLYTEGVVIHWHGIRQ--LG-----------T-PWADGT-AS-----ISQCPINPGET 116 (580)
Q Consensus 58 ~~pgP~l~v~~G-d~v~v~v~N~l~~~~~siH~HG~~~--~~-----------~-~~~DG~-~~-----~~q~~i~pG~~ 116 (580)
++--..|.|+.| ++|+|+|+|. ...++++=.|-+.. .+ . ...+.. |. .....|.||++
T Consensus 14 ~fd~~~i~V~aG~e~v~i~~~N~-g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~ 92 (129)
T d1cuoa_ 14 TYSTRSISVPASCAEFTVNFEHK-GHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEEC-SSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred cCcccEEEEeCCCEEEEEEEEeC-CcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCcccc
Confidence 354578999999 7999999999 66664332232211 00 0 001111 11 11356899999
Q ss_pred EEEEEEc---CCCcceeeecCcchhhccccEEEEEEEc
Q 008038 117 YLYRFKV---DKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 117 ~~y~f~~---~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
.+..|++ .++|+|.|-|-...|. .||.|.|+|++
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 93 TSVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred ceEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 9999998 4699999999988886 79999999974
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.75 E-value=3.8e-05 Score=64.20 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=64.4
Q ss_pred CCCCeEEe-cCCCEEEEEEEeCCCCCceeeeecccc--ccC-------------------CCCCCCCCCCccccCCCCCe
Q 008038 59 FPGPTIRA-RAGDTIAVELTNKLYTEGVVIHWHGIR--QLG-------------------TPWADGTASISQCPINPGET 116 (580)
Q Consensus 59 ~pgP~l~v-~~Gd~v~v~v~N~l~~~~~siH~HG~~--~~~-------------------~~~~DG~~~~~q~~i~pG~~ 116 (580)
|--..|.| +.|++|+|+++|. ...++++=.|-.. ... .+.++.+-. ....|.||++
T Consensus 15 Fd~~~i~V~k~Ge~v~l~~~N~-g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~-~t~~l~pGes 92 (128)
T d1jzga_ 15 FNTNAITVDKSCKQFTVNLSHP-GNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIA-HTKLIGSGEK 92 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEECC-SSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCE-ECCCBCTTCE
T ss_pred CccceEEEecCCCEEEEEEEeC-CccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhh-cccccCCCce
Confidence 44578999 5899999999999 6777665444311 000 012222211 1246899999
Q ss_pred EEEEEEc---CCCcceeeecCcchhhccccEEEEEEE
Q 008038 117 YLYRFKV---DKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 117 ~~y~f~~---~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
.+..|++ .++|+|-|-|-...|. .||.|.|+|+
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 93 DSVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 9999998 4799999999988887 7999999985
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.73 E-value=4.2e-05 Score=67.26 Aligned_cols=82 Identities=16% Similarity=0.205 Sum_probs=66.0
Q ss_pred EEEEcCC--------CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEE
Q 008038 52 VMGINGQ--------FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLY 119 (580)
Q Consensus 52 ~~~~NG~--------~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y 119 (580)
...+||. -+.++|+|++|+++++|++|........++.+|..... ...||.+ .+....|.|||+++.
T Consensus 38 ~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~d~l~i~~gqRydv 116 (170)
T d1gyca2 38 ATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTV-IEVDGINSQPLLVDSIQIFAAQRYSF 116 (170)
T ss_dssp EEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEE
T ss_pred cccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEE-EEeCCeeccceEeeEEEecCCeEEEE
Confidence 4577764 34489999999999999999966677888888877653 5789976 345678999999999
Q ss_pred EEEc-CCCcceeeecC
Q 008038 120 RFKV-DKAGTYFYHGH 134 (580)
Q Consensus 120 ~f~~-~~~Gt~wYH~H 134 (580)
.+++ +.+|.||-+..
T Consensus 117 lv~~~~~~~~y~ira~ 132 (170)
T d1gyca2 117 VLNANQTVGNYWIRAN 132 (170)
T ss_dssp EEECCSCSSEEEEEEE
T ss_pred EEeCCCCCCcEEEEEe
Confidence 9999 56899999865
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.72 E-value=2e-05 Score=70.06 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=67.8
Q ss_pred EEEEEcCC--------CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEE
Q 008038 51 IVMGINGQ--------FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYL 118 (580)
Q Consensus 51 ~~~~~NG~--------~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~ 118 (580)
..++|||+ -+...+.+++|++.++||+|........++++|..+.. ...||.+ .+....|.|||+++
T Consensus 34 d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~~~~~i~~GqRyd 112 (181)
T d2q9oa2 34 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYD 112 (181)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEEECCceEEE-EEeCCeEccceEeCEEEecCCcEEE
Confidence 46788985 23468999999999999999965667889999887653 5789977 23457899999999
Q ss_pred EEEEc-CCCcceeeecCc
Q 008038 119 YRFKV-DKAGTYFYHGHL 135 (580)
Q Consensus 119 y~f~~-~~~Gt~wYH~H~ 135 (580)
..+++ +.+|.||.....
T Consensus 113 vlv~a~~~~~~Y~ir~~~ 130 (181)
T d2q9oa2 113 VVIDASRAPDNYWFNVTF 130 (181)
T ss_dssp EEEECCSCSSEEEEEEEC
T ss_pred EEEeCCCCCccEEEEEec
Confidence 99999 778999988764
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.72 E-value=2.5e-05 Score=68.90 Aligned_cols=83 Identities=14% Similarity=0.188 Sum_probs=66.7
Q ss_pred EEEEEcCC--------CCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEE
Q 008038 51 IVMGINGQ--------FPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYL 118 (580)
Q Consensus 51 ~~~~~NG~--------~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~ 118 (580)
...+|||+ -+.++|.+++|+++++|++|........+++.|..+.. ...||++ .+....|.|||+++
T Consensus 35 d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~v-ia~DG~~v~P~~~~~l~i~~gqR~d 113 (172)
T d1hfua2 35 DATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRYS 113 (172)
T ss_dssp SEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEE
T ss_pred CcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEE-EEeCCEEcccEEeceEeccCCeEEE
Confidence 45678885 34588999999999999999966667888888876643 4689976 23467899999999
Q ss_pred EEEEc-CCCcceeeecC
Q 008038 119 YRFKV-DKAGTYFYHGH 134 (580)
Q Consensus 119 y~f~~-~~~Gt~wYH~H 134 (580)
..+++ +..|.||....
T Consensus 114 vlv~~~~~~~~Y~ira~ 130 (172)
T d1hfua2 114 FVLDANQPVDNYWIRAQ 130 (172)
T ss_dssp EEEECCSCSSEEEEEEE
T ss_pred EEEEcCCCCCcEEEEEE
Confidence 99999 56799999876
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.65 E-value=6.3e-05 Score=62.77 Aligned_cols=90 Identities=17% Similarity=0.100 Sum_probs=64.2
Q ss_pred CCCCeEEec-CCCEEEEEEEeCCCCCceeeeecccccc--C------------CCCCCCCCC------CccccCCCCCeE
Q 008038 59 FPGPTIRAR-AGDTIAVELTNKLYTEGVVIHWHGIRQL--G------------TPWADGTAS------ISQCPINPGETY 117 (580)
Q Consensus 59 ~pgP~l~v~-~Gd~v~v~v~N~l~~~~~siH~HG~~~~--~------------~~~~DG~~~------~~q~~i~pG~~~ 117 (580)
|--.+|.|+ .|++|+|+|+|. ...++++=.|-+-.. . ....+-.|. .....|.||++.
T Consensus 15 fd~~~i~V~~~ge~v~i~~~N~-g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 15 FNTKDIAIDKSCKTFTVELTHS-GSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEEC-SSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CcCCeEEEecCCcEEEEEEEeC-CccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 445789995 699999999999 777776655532110 0 000111121 112468999999
Q ss_pred EEEEEc---CCCcceeeecCcchhhccccEEEEEEE
Q 008038 118 LYRFKV---DKAGTYFYHGHLGMQRSAGLYGSLIVD 150 (580)
Q Consensus 118 ~y~f~~---~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 150 (580)
+..|++ .++|+|-|-|-...|. .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 999999 3789999999988887 7899999985
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.65 E-value=9.7e-05 Score=59.62 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=53.0
Q ss_pred cCCCCCCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc
Q 008038 56 NGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL 135 (580)
Q Consensus 56 NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~ 135 (580)
+-.|-.+.|.+++||+| +++|. ...++++........ .++ -..-.+.+|++++|.| +++|+|.|+|-.
T Consensus 28 ~~~F~P~~i~V~~GdtV--~f~N~-d~~~H~v~~~~~~~~----~~~---f~s~~~~~~~~~~~tf--~~~G~y~y~C~~ 95 (106)
T d1id2a_ 28 KMKYLTPEVTIKAGETV--YWVNG-EVMPHNVAFKKGIVG----EDA---FRGEMMTKDQAYAITF--NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEE--EEEEC-SSSCBCCEECTTTSS----SSC---EECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred cCEEeCCEEEECCCCEE--EEEEC-CCCceeEEeccccCC----ccc---ccccccCCCceEEEec--CCCeEEEEEccC
Confidence 33455679999999985 56788 566666654332111 111 1123467888888777 689999999954
Q ss_pred chhhccccEEEEEEE
Q 008038 136 GMQRSAGLYGSLIVD 150 (580)
Q Consensus 136 ~~~~~~Gl~G~liV~ 150 (580)
| .||.|.|+|+
T Consensus 96 --H--~~M~G~I~Ve 106 (106)
T d1id2a_ 96 --H--PFMRGKVIVE 106 (106)
T ss_dssp --C--TTCEEEEEEC
T ss_pred --C--CCCEEEEEEC
Confidence 2 4899999985
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.53 E-value=6.1e-05 Score=67.13 Aligned_cols=98 Identities=13% Similarity=-0.005 Sum_probs=61.4
Q ss_pred eeEEccCCcEEEEEEEcCCCCC----------------CCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCcc
Q 008038 446 GVYMLGLNTTVDVILQNANAIR----------------PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLK 509 (580)
Q Consensus 446 ~~~~~~~G~~v~~~l~N~~~~~----------------~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~r 509 (580)
++++++.|+.+++.+.|.-... ........+|+||... -...+|.-. +....
T Consensus 57 PtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~--~~~~DG~~~----------~~~~~ 124 (181)
T d1gska1 57 PTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT--PDDSDGYPE----------AWFSK 124 (181)
T ss_dssp CBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCC--CGGGSCCTT----------SCBCG
T ss_pred CeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeecccc--CCccCCCcc----------ccccc
Confidence 3599999999999999942210 0011235699999743 222222110 01111
Q ss_pred c-eEEeCCCcEEEEEEEecC-ceeeEEeeec----chhhhcccEEEEecccc
Q 008038 510 N-TAVIFPYGWTALRFVADN-PGAWAFHCHI----EPHFHIGMGVVLALGVE 555 (580)
Q Consensus 510 D-Tv~vpp~g~v~irf~adn-pG~w~~HCHi----l~H~d~GM~~~~~~~~~ 555 (580)
+ +...+++...+.+|.++. +|.|.||||. ..|...||.+.+.+.++
T Consensus 125 ~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~ 176 (181)
T d1gska1 125 DFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 176 (181)
T ss_dssp GGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred CcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCc
Confidence 1 122345667788999886 4899999997 46888999999976543
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.42 E-value=0.0001 Score=67.38 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=59.0
Q ss_pred CCeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC----CCccccCCCCCeEEEEEEcC--CCcceeeecC
Q 008038 61 GPTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA----SISQCPINPGETYLYRFKVD--KAGTYFYHGH 134 (580)
Q Consensus 61 gP~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~----~~~q~~i~pG~~~~y~f~~~--~~Gt~wYH~H 134 (580)
-|+|+|++|+++++||.|........+|++|..... ...||.+ .+....|.|||+++..++++ ..+.||-...
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~V-Ia~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~ 152 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVG 152 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEE
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEE-EecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEe
Confidence 378999999999999999955667899999977653 5779976 24567889999999999993 3457887765
Q ss_pred c
Q 008038 135 L 135 (580)
Q Consensus 135 ~ 135 (580)
.
T Consensus 153 ~ 153 (209)
T d1aoza2 153 T 153 (209)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.41 E-value=0.00036 Score=60.09 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=78.7
Q ss_pred EEEEEcCCCCC----CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCC------CCccccCCCCCeEEEE
Q 008038 51 IVMGINGQFPG----PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTA------SISQCPINPGETYLYR 120 (580)
Q Consensus 51 ~~~~~NG~~pg----P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~------~~~q~~i~pG~~~~y~ 120 (580)
..+.|||..-. -.|+++.||+|.+ .|.-....++.|.-|-+... .|.+|.. ++-...|+||+.-.-+
T Consensus 55 thVVFNG~vgaltg~~aL~AkvGEtV~~--~~~gpN~~SsfHvIGg~~D~-V~~~G~~~n~p~~~~qT~~v~~G~a~~~~ 131 (178)
T d1mzya2 55 SHIVFNGAVGALTGEGALKAKVGDNVLF--VHSQPNRDSRPHLIGGHGDL-VWETGKFHNAPERDLETWFIRGGTAGAAL 131 (178)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEEETCCEEE-EETTCCTTSCCEEEESBCCBCTTEEEEEE
T ss_pred CEEEECCccCcccCCCCcccccCCeEEE--ecccCCCCCCcccccCccce-EccCCccCCCCCCCceEEEecCCceeEEE
Confidence 35799996543 3699999999854 55548889999999988752 4666643 2334678999998889
Q ss_pred EEcCCCcceeeecCcchh-hccccEEEEEEEcCCC
Q 008038 121 FKVDKAGTYFYHGHLGMQ-RSAGLYGSLIVDVADG 154 (580)
Q Consensus 121 f~~~~~Gt~wYH~H~~~~-~~~Gl~G~liV~~~~~ 154 (580)
|+..++|+|-|..|.-.. ...|..|.|.|+.+..
T Consensus 132 ~tf~~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 132 YKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp EECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEeCCCeEEEEEccHHHHHHhCCCeEEEEeCCCCC
Confidence 999999999999997654 5789999999997654
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=97.13 E-value=0.00021 Score=56.60 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=30.0
Q ss_pred ceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 510 NTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 510 DTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+...+.+|... .++++.||.|.|+|.. |...||.+.|.|
T Consensus 59 ~~~~~~~g~t~--~~tf~~~G~y~Y~C~~--H~~~gM~G~I~V 97 (98)
T d1pcsa_ 59 KGLLFAAGESF--TSTFTEPGTYTYYCEP--HRGAGMVGKVVV 97 (98)
T ss_dssp EEEECSTTCEE--EEECCSCEEEEEECGG--GTTTTCEEEEEE
T ss_pred cccccCCCcEE--EEeccCCceEEEEecc--CCCCCCEEEEEE
Confidence 44556667644 4466899999999964 999999999865
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.11 E-value=0.00083 Score=55.21 Aligned_cols=69 Identities=16% Similarity=0.342 Sum_probs=53.2
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|.|.|.|.+. .|.|.+-+.. =.+.+.||....+.|+++
T Consensus 49 l~vp~G~~V~~~lts~DV-------~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~ 94 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPDV-------IHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFK 94 (122)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEEEEETTSS---------------------------CEEEECBTBCEEEEEECC
T ss_pred EEEeCCCEEEEEEEcCCc-------cceeEecCCC---------------------------eeEEEecCceEEEEEEec
Confidence 889999999999999764 4655432211 123466799999999999
Q ss_pred CceeeEEeeec---chhhhcccEEEEec
Q 008038 528 NPGAWAFHCHI---EPHFHIGMGVVLAL 552 (580)
Q Consensus 528 npG~w~~HCHi---l~H~d~GM~~~~~~ 552 (580)
.||.|.+.|+. ..|. +|.+.+.|
T Consensus 95 ~~G~y~~~C~~~CG~~H~--~M~g~i~V 120 (122)
T d2cuaa_ 95 RPGEYRIICNQYCGLGHQ--NMFGTIVV 120 (122)
T ss_dssp SCEEEEEECCSCCSTTST--TCEEEEEE
T ss_pred cceeEEEEehhccCCCcc--cCeEEEEE
Confidence 99999999998 6784 78888765
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=97.06 E-value=0.00012 Score=58.87 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=55.3
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe-
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA- 526 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a- 526 (580)
+.++.|++|+|+ |.+.. .|..++....+.. + .... ......++..+.|++...+.|.+
T Consensus 21 l~v~~GdtV~f~--n~~~~------~h~~~~~~~~~~~-----~-~~~~-------~~~~~~~~~~~~~g~~~~~~f~~~ 79 (105)
T d2q5ba1 21 VTVHPGDTVKWV--NNKLP------PHNILFDDKQVPG-----A-SKEL-------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp EEECTTEEEEEE--ECSSC------CEEEEECGGGSGG-----G-CHHH-------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred EEECCCCEEEEE--ECCCC------CceeEeecCcccc-----c-cccc-------CCccccccccccCCceEEEEEEec
Confidence 889999999875 43333 5655444332210 0 0000 00123567788899999999985
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|.. |...||.+.+.|
T Consensus 80 ~~~G~y~y~C~~--H~~~GM~G~I~V 103 (105)
T d2q5ba1 80 FPAGTYTYYCAP--HRGAGMVGKITV 103 (105)
T ss_dssp SCSEEEEEECST--TGGGTCEEEEEE
T ss_pred cCCceEEEEeCC--CCCCCCEEEEEE
Confidence 689999999974 999999999865
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.00091 Score=58.16 Aligned_cols=95 Identities=17% Similarity=0.100 Sum_probs=68.3
Q ss_pred EEEEEEEEEEEeCCCC--------------ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccC
Q 008038 32 RHYKWEVEYMFWSPDC--------------KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLG 96 (580)
Q Consensus 32 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~ 96 (580)
.++-|.++...+..+| .....+++||+. .|++.++ |.++++|+.|........+++ +|....-
T Consensus 9 ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~v 86 (165)
T d1kv7a2 9 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPLYV 86 (165)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBS-SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred CcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcc-cceEecc-CcEEEEEEEEcccCceeeEEecCCCeEEE
Confidence 3566777665554444 234589999995 7999986 779999999996566777776 6754322
Q ss_pred CCCCCCCC-----CCccccCCCCCeEEEEEEcCCCcce
Q 008038 97 TPWADGTA-----SISQCPINPGETYLYRFKVDKAGTY 129 (580)
Q Consensus 97 ~~~~DG~~-----~~~q~~i~pG~~~~y~f~~~~~Gt~ 129 (580)
...||.+ .+....|.|||+++.-+++.+.+++
T Consensus 87 -ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~ 123 (165)
T d1kv7a2 87 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPF 123 (165)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEECTTCCE
T ss_pred -EEeCCccccCceEeCeEEECCCCEEEEEEECCCCCcE
Confidence 4679865 2346789999999999998666554
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=96.90 E-value=0.00045 Score=54.56 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=48.6
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.|+ |.+.. .|.++.+.... ..... . +....+.....++. .+.+++
T Consensus 19 ~i~v~~GdtV~f~--n~~~~------~h~~~~~~~~~------~~~~~-~--------~~~~~~~~~~~~~~--t~~~tf 73 (98)
T d2plta_ 19 TLTIKSGETVNFV--NNAGF------PHNIVFDEDAI------PSGVN-A--------DAISRDDYLNAPGE--TYSVKL 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECGGGS------CTTCC-H--------HHHCEEEEECSTTC--EEEEEC
T ss_pred EEEECCCCEEEEE--ECCCC------ceeEEEecCCc------ccccc-C--------CcccccccccCCCc--eEEEEe
Confidence 3889999999986 44333 45554443211 00000 0 00122344444444 456678
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|. .|...||-+.+.|
T Consensus 74 ~~~G~y~y~C~--~H~~~GM~G~I~V 97 (98)
T d2plta_ 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred cCCceEEEEeC--cCCCCCCEEEEEE
Confidence 99999999996 4999999998865
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=96.84 E-value=0.0013 Score=57.78 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=63.1
Q ss_pred ceeEEEEEcCCCCCCeEEecCCCEEEEEEEeCCCCCceeeee-ccccccCCCCCCCCC-----CCccccCCCCCeEEEEE
Q 008038 48 KESIVMGINGQFPGPTIRARAGDTIAVELTNKLYTEGVVIHW-HGIRQLGTPWADGTA-----SISQCPINPGETYLYRF 121 (580)
Q Consensus 48 ~~~~~~~~NG~~pgP~l~v~~Gd~v~v~v~N~l~~~~~siH~-HG~~~~~~~~~DG~~-----~~~q~~i~pG~~~~y~f 121 (580)
.....+++||+. .|++.++ |.++++|+.|........+++ +|..... ...||.+ .+....|.|||+++..+
T Consensus 46 ~~Gd~~lvNG~~-~p~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~v-Ia~DG~~l~~P~~~~~l~l~pgeR~dvlv 122 (174)
T d1gska2 46 FCGETILVNGKV-WPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIII 122 (174)
T ss_dssp CCCSEEEETTEE-SCEEECC-SSEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred ccCCeEEecCcc-ceEEEec-CceEEEEEEecccCceeeEeecCCCcEEE-EEECCCcccCceEeCEEEEcCCcEEEEEE
Confidence 344578999985 7999987 457999999997777888988 5743321 4678865 23457789999999999
Q ss_pred Ec-CCCcceeeecC
Q 008038 122 KV-DKAGTYFYHGH 134 (580)
Q Consensus 122 ~~-~~~Gt~wYH~H 134 (580)
.+ ..+|++|+--+
T Consensus 123 ~~~~~~g~~~~l~~ 136 (174)
T d1gska2 123 DFTAYEGESIILAN 136 (174)
T ss_dssp ECGGGTTCEEEEEE
T ss_pred ECCCCCCceEEEEc
Confidence 88 55787777554
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.81 E-value=0.0021 Score=49.77 Aligned_cols=39 Identities=21% Similarity=0.396 Sum_probs=31.0
Q ss_pred ceEEeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 510 NTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 510 DTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+...+.+|.. .++.++.||.|.|+|. .|...||.+.+.|
T Consensus 52 ~~~~~~~g~~--~~~tF~~~G~y~Y~C~--~H~~~gM~G~I~V 90 (91)
T d1bxua_ 52 KDLAFSPGET--FEATFSEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECSTTCE--EEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cccccCCCCC--EEEEeccCceEEEEeC--CCCCCCCEEEEEE
Confidence 5566667765 4567789999999995 4999999998865
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.55 E-value=0.0016 Score=53.56 Aligned_cols=32 Identities=25% Similarity=0.564 Sum_probs=27.8
Q ss_pred EEEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 521 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
.+.+.++.||.|.|+|.+ |..+||.+++.|+.
T Consensus 63 ~~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd 94 (123)
T d1pmya_ 63 EAVVKFDKEGVYGFKCAP--HYMMGMVALVVVGD 94 (123)
T ss_dssp CEEEECCSCEEEEEECST--TTTTTCEEEEEESS
T ss_pred ccccccCCCceEEEEecc--CCCCCCEEEEEECC
Confidence 356778999999999965 99999999998865
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=96.46 E-value=0.0015 Score=51.51 Aligned_cols=82 Identities=12% Similarity=0.146 Sum_probs=48.7
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|+|+ |.+.. .|.+......+ ...... .... ...+.....||.... +++
T Consensus 18 ~iti~~GdtV~f~--n~~~~------~Hnv~~~~~~~------~~~~~~-~~~~------~~~~~~~~~~g~t~~--~tF 74 (99)
T d1plca_ 18 EFSISPGEKIVFK--NNAGF------PHNIVFDEDSI------PSGVDA-SKIS------MSEEDLLNAKGETFE--VAL 74 (99)
T ss_dssp EEEECTTCEEEEE--ECSSC------CBCCEECTTSS------CTTCCH-HHHC------CCTTCCBCSTTCEEE--EEC
T ss_pred EEEECCCCEEEEE--ECCCC------CccEEEccCcC------CCcccc-ccCc------ccccccccCCCceEE--Eec
Confidence 3899999999984 64444 57654322111 000000 0000 111223345666544 456
Q ss_pred cCceeeEEeeecchhhhcccEEEEecc
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
+.||.|-|+| ..|...||-+.+.|.
T Consensus 75 ~~~G~y~Y~C--~pH~~~GM~G~I~V~ 99 (99)
T d1plca_ 75 SNKGEYSFYC--SPHQGAGMVGKVTVN 99 (99)
T ss_dssp CSCEEEEEEC--GGGTTTTCEEEEEEC
T ss_pred CCCceEEEEe--CCCcCCCcEEEEEEC
Confidence 8999999999 469999999998763
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=96.13 E-value=0.0031 Score=49.40 Aligned_cols=30 Identities=27% Similarity=0.564 Sum_probs=26.0
Q ss_pred EEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 521 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.+.++++.||.|.|+|- .|...||.+.+.|
T Consensus 67 ~~~~tf~~~G~y~Y~C~--~H~~~GM~G~I~V 96 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CEEEECCSCSEEEEECS--STTTTTCEEEEEE
T ss_pred EEEEecCCCeEEEEEEc--cCCCCCCEEEEEE
Confidence 56777899999999995 4999999999865
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.12 E-value=0.0016 Score=46.99 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=33.9
Q ss_pred eCCCcEEEEEEEecCce----------eeEEeeecch--hhhcccEEEEecc
Q 008038 514 IFPYGWTALRFVADNPG----------AWAFHCHIEP--HFHIGMGVVLALG 553 (580)
Q Consensus 514 vpp~g~v~irf~adnpG----------~w~~HCHil~--H~d~GM~~~~~~~ 553 (580)
|.||++.+.+|++...+ .|+||||... +...||.+.|.+-
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~ 54 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLIC 54 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEE
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEc
Confidence 67899999999986554 8999999966 6778999999763
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=96.06 E-value=0.0081 Score=49.57 Aligned_cols=95 Identities=16% Similarity=0.207 Sum_probs=66.3
Q ss_pred EEccCC-cEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc---------ccccccCCCC-CCccceEEeCC
Q 008038 448 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---------EDEKKFNLKN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~~~G-~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~---------~~~~~~~~~~-p~~rDTv~vpp 516 (580)
+.++.| +.|+++|.|.+.+ +|-+= +|.+.+...+. ... .....+-+.+ ..+.-|..|.|
T Consensus 20 i~V~aG~e~v~i~~~N~g~l------ph~~~--~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~p 89 (129)
T d1cuoa_ 20 ISVPASCAEFTVNFEHKGHM------PKTGM--GHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------CHHHH--CBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEeCCCEEEEEEEEeCCcC------CceeE--Eeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCc
Confidence 889999 8999999999877 66653 44554444321 110 0000111111 24455788999
Q ss_pred CcEEEEEEEe---cCceeeEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...|.|++ +.||.|-|=|=+-.|. .||-+++.|.
T Consensus 90 Ge~~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d1cuoa_ 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEE
T ss_pred cccceEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEe
Confidence 9999999997 4699999999999997 8999999763
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=96.00 E-value=0.0085 Score=49.44 Aligned_cols=95 Identities=14% Similarity=0.141 Sum_probs=65.6
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc---------ccccccCCCC-CCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---------EDEKKFNLKN-PPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~---------~~~~~~~~~~-p~~rDTv~vpp 516 (580)
+.+ +.|+.|+++|.|.+.+ +|-+=. |.|.+...+. ... ....-+.... ..+.-|..|.|
T Consensus 20 i~V~k~G~~V~l~~~N~g~l------~h~~m~--hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~p 89 (129)
T d2ccwa1 20 IVVDKSCKQFTMHLKHVGKM------AKVAMG--HNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------CHHHHC--BCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEcCCcC------chheee--ccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCC
Confidence 777 7899999999998876 555433 4555554321 100 0000010111 13345788899
Q ss_pred CcEEEEEEEe---cCceeeEEeeecchhhhcccEEEEecc
Q 008038 517 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 517 ~g~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
|+...|.|++ +.||.|-|=|=+--|. .||-+++.|.
T Consensus 90 get~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 90 GESDSVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred CceEEEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999999999 4799999999999996 8999999874
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=95.86 E-value=0.008 Score=48.89 Aligned_cols=31 Identities=32% Similarity=0.770 Sum_probs=27.1
Q ss_pred EEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 522 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 522 irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
..++++.||.|.|+|- .|..+||.+++.|+.
T Consensus 64 ~s~tF~~~G~y~Y~Ct--pH~~~GM~G~I~Vg~ 94 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (120)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEEecCCCeEEEEEe--eCCCCCCEEEEEECC
Confidence 4567799999999996 499999999998875
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.75 E-value=0.013 Score=48.24 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=66.5
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc---------ccccccCC-CCCCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---------EDEKKFNL-KNPPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~---------~~~~~~~~-~~p~~rDTv~vpp 516 (580)
+.+ +.|+.|+++|.|.+.+ +|-+=+|- ..++..+. ... .....+-+ ..-++.-|..|.|
T Consensus 20 i~V~k~Ge~v~l~~~N~g~~------pH~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~p 89 (128)
T d1jzga_ 20 ITVDKSCKQFTVNLSHPGNL------PKNVMGHN--WVLSTAAD--MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGS 89 (128)
T ss_dssp EEECTTCSEEEEEEECCSSS------CHHHHCBC--CEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCT
T ss_pred EEEecCCCEEEEEEEeCCcc------chheeecC--cccccchh--HHHHHHHHHhhhhccccCCCCccchhhcccccCC
Confidence 778 6899999999999988 88876654 33333211 000 00000001 1124556888999
Q ss_pred CcEEEEEEEe---cCceeeEEeeecchhhhcccEEEEec
Q 008038 517 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 517 ~g~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
|+...|.|++ +.||.|.|=|=+-.|. .||-+++.|
T Consensus 90 Ges~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V 127 (128)
T d1jzga_ 90 GEKDSVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTL 127 (128)
T ss_dssp TCEEEEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEE
T ss_pred CceEEEEEEeeccCCCceEEEEECCCCcc-cccEEEEEE
Confidence 9999999997 4799999999999999 999999865
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=95.51 E-value=0.0015 Score=51.79 Aligned_cols=30 Identities=23% Similarity=0.492 Sum_probs=25.5
Q ss_pred EEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 521 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...+.++.||.|.|+|.. |...||-+.|.|
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~V 101 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTV 101 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEE
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEE
Confidence 456667899999999974 999999999865
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.43 E-value=0.013 Score=46.45 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=44.5
Q ss_pred eEEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEe
Q 008038 447 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 526 (580)
Q Consensus 447 ~~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 526 (580)
.+.++.|++|.| .|.+.. .|.++.... .... ...+.-.+.+|+. .++.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~------~H~v~~~~~----------~~~~-----------~~~~~~~~~~g~~--~~~tf 82 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAM------PHNVHFVAG----------VLGE-----------AALKGPMMKKEQA--YSLTF 82 (105)
T ss_dssp EEEECTTCEEEE--EECSSS------CBCCEECTT----------TSSS-----------SCEECCCBCTTEE--EEEEE
T ss_pred EEEECCCCEEEE--EECCCC------ceeEEEecc----------cCCc-----------ccccccccCCCce--EEEEe
Confidence 388999999998 465544 676543221 1100 0112233445554 45566
Q ss_pred cCceeeEEeeecchhhhcccEEEEec
Q 008038 527 DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 527 dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
+.||.|.|+|-+ | .||.+.+.|
T Consensus 83 ~~pG~y~y~C~~--H--~~M~G~I~V 104 (105)
T d2ov0a1 83 TEAGTYDYHCTP--H--PFMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--C--TTCEEEEEE
T ss_pred cCCeEEEEEecC--C--CCCEEEEEE
Confidence 899999999976 6 589988865
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=95.30 E-value=0.01 Score=46.41 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=28.4
Q ss_pred EeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEecc
Q 008038 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 553 (580)
Q Consensus 513 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~~ 553 (580)
...++.. +.++++.||.|-|+|- .|...||.+.|.|+
T Consensus 63 ~~~~~~~--~~~tf~~~G~y~y~C~--~H~~~GM~G~I~V~ 99 (99)
T d1bypa_ 63 LNAPGEE--YSVTLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp BCSTTCE--EEEEECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ccCCCce--EEEEecCCceEEEEEC--cCCCCCCEEEEEEC
Confidence 3444444 4556689999999995 49999999999763
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=95.28 E-value=0.032 Score=45.70 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=68.5
Q ss_pred EEc-cCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCc--------ccccccCCC--CCCccceEEeCC
Q 008038 448 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--------EDEKKFNLK--NPPLKNTAVIFP 516 (580)
Q Consensus 448 ~~~-~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~--------~~~~~~~~~--~p~~rDTv~vpp 516 (580)
+.+ +.|+.|+++|.|.+.+ +|.+=+|- +.++..+. ... .....+-+. .+++..|..|.|
T Consensus 20 i~V~~~ge~v~i~~~N~g~~------pH~~~~hn--~vi~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~p 89 (128)
T d1nwpa_ 20 IAIDKSCKTFTVELTHSGSL------PKNVMGHN--LVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------CHHHHCBC--CEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCcEEEEEEEeCCcc------ccceeeec--ccccccch--hHHHHHHHHhhhccccCCCCCchhheeecccccC
Confidence 777 5699999999999988 88876554 45554321 111 001112221 235667889999
Q ss_pred CcEEEEEEEe---cCceeeEEeeecchhhhcccEEEEec
Q 008038 517 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 517 ~g~v~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
|+...|.|++ +.||.|.|=|=.--|. .||-+.+.|
T Consensus 90 Ges~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V 127 (128)
T d1nwpa_ 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTL 127 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEE
T ss_pred CCceEEEEEecccCCCceEEEEECCCCcc-cCceEEEEE
Confidence 9999999998 4789999999999998 899999865
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=95.13 E-value=0.0056 Score=48.56 Aligned_cols=42 Identities=26% Similarity=0.428 Sum_probs=35.3
Q ss_pred cceEEeCCCcEEEEEEEe-cCceeeEEeeecchhhhcccEEEEec
Q 008038 509 KNTAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 509 rDTv~vpp~g~v~irf~a-dnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
.+.....++....+.|.+ +.||.|.|.|- .|...||-+.|.|
T Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~I~V 103 (105)
T d2cj3a1 61 HKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITV 103 (105)
T ss_dssp EEEEECSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccccccCCCcceEEEEEeccCCceEEEEeC--CCcCCCcEEEEEE
Confidence 466777788888888876 68999999996 4999999999876
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=94.90 E-value=0.021 Score=46.60 Aligned_cols=31 Identities=29% Similarity=0.723 Sum_probs=26.6
Q ss_pred EEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 522 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 522 irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.++++.+|.|-|+|= .|..+||.+.+.|+.
T Consensus 64 ~~~tF~~~G~Y~Y~C~--pH~~~GM~G~I~Vg~ 94 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEEECSCEEEEEECG--GGGGGTCEEEEEESS
T ss_pred eEEeccCCCeEEEEEc--cCCCCCCEEEEEECC
Confidence 4566789999999995 499999999998865
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=94.68 E-value=0.019 Score=44.60 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=28.0
Q ss_pred EeCCCcEEEEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 513 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 513 ~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...++. .+.+.++.||.|.|+|- .|..+||.+.+.|
T Consensus 62 ~~~~~~--~~~~~f~~~G~y~y~C~--~H~~~GM~G~I~V 97 (98)
T d1iuza_ 62 LNSKGE--TVVRKLSTPGVYGVYCE--PHAGAGMKMTITV 97 (98)
T ss_dssp ECSTTC--EEEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCCCc--EEEEecCCCceEEEEeC--CCccCCCeEEEEE
Confidence 334444 34567789999999996 4999999999865
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=94.51 E-value=0.018 Score=47.06 Aligned_cols=31 Identities=29% Similarity=0.705 Sum_probs=27.1
Q ss_pred EEEEecCceeeEEeeecchhhhcccEEEEeccc
Q 008038 522 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 554 (580)
Q Consensus 522 irf~adnpG~w~~HCHil~H~d~GM~~~~~~~~ 554 (580)
+.++++.||.|-|+|. .|...||.+.+.|+.
T Consensus 64 ~s~Tf~~~G~Y~Y~C~--pH~~~GM~G~IvVgd 94 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCT--PHYGMGMVGVVQVGD 94 (124)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEecCCCceEEEEec--cCcCCCCEEEEEECC
Confidence 4567799999999996 599999999998874
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=90.84 E-value=0.22 Score=38.89 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=22.7
Q ss_pred EEEEEecCceeeEEeeecchhhhcccEEEEec
Q 008038 521 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 552 (580)
Q Consensus 521 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~~ 552 (580)
...+.++.||.|-|+|=+ | .||.+.+.|
T Consensus 78 ~~~~tf~~~G~y~y~C~~--H--~~M~G~I~V 105 (106)
T d1id2a_ 78 AYAITFNEAGSYDYFCTP--H--PFMRGKVIV 105 (106)
T ss_dssp EEEEEECSCEEEEEECSS--C--TTCEEEEEE
T ss_pred eEEEecCCCeEEEEEccC--C--CCCEEEEEE
Confidence 355677899999999975 7 499998865
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=90.56 E-value=0.44 Score=39.99 Aligned_cols=76 Identities=13% Similarity=0.006 Sum_probs=56.2
Q ss_pred CeEEecCCCEEEEEEEeCCCCCceeeeeccccccCCCCCCCCCCCccccCCCCCeEEEEEEcCCCcceeeecCc-chhhc
Q 008038 62 PTIRARAGDTIAVELTNKLYTEGVVIHWHGIRQLGTPWADGTASISQCPINPGETYLYRFKVDKAGTYFYHGHL-GMQRS 140 (580)
Q Consensus 62 P~l~v~~Gd~v~v~v~N~l~~~~~siH~HG~~~~~~~~~DG~~~~~q~~i~pG~~~~y~f~~~~~Gt~wYH~H~-~~~~~ 140 (580)
..|++..|..|++.++.. +..|++..-.+.. +.-+-||..-+..|+++++|+|+..|.- -...-
T Consensus 27 n~l~lP~g~pV~~~ltS~--DViHsF~vP~l~~-------------k~daiPG~~~~~~~~~~~~G~y~g~Cae~CG~gH 91 (158)
T d1cyxa_ 27 NEIAFPANTPVYFKVTSN--SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIANEPGTYDGICAEICGPGH 91 (158)
T ss_dssp SEEEEETTSCEEEEEEES--SSCEEEEEGGGTE-------------EEEECTTCCEEEEECCSSSEEEEEEECSCCSTTS
T ss_pred eeEEeeCCCeEEEEEEcC--Ccchhhhhhhcce-------------eeccCCCceeeeeeeecCCCcEEEEchhhcCccc
Confidence 479999999999999998 4555555444432 4567889999999999999999999982 22223
Q ss_pred cccEEEEEEEcC
Q 008038 141 AGLYGSLIVDVA 152 (580)
Q Consensus 141 ~Gl~G~liV~~~ 152 (580)
..|.+.+++.+.
T Consensus 92 ~~M~~~v~vv~~ 103 (158)
T d1cyxa_ 92 SGMKFKAIATPD 103 (158)
T ss_dssp TTCCEEEEEESS
T ss_pred ccCceEEEEECC
Confidence 457777766643
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=84.23 E-value=1 Score=37.67 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=48.6
Q ss_pred EEccCCcEEEEEEEcCCCCCCCCCCCCCeeecCCCeEEEeecCCCCCcccccccCCCCCCccceEEeCCCcEEEEEEEec
Q 008038 448 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 527 (580)
Q Consensus 448 ~~~~~G~~v~~~l~N~~~~~~~~~~~HP~HlHG~~F~vv~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 527 (580)
+.++.|+.|++.|...+-+ |.|+|-+. +=-..+-||....+.|+++
T Consensus 29 l~lP~g~pV~~~ltS~DVi--------------HsF~vP~l--------------------~~k~daiPG~~~~~~~~~~ 74 (158)
T d1cyxa_ 29 IAFPANTPVYFKVTSNSVM--------------HSFFIPRL--------------------GSQIYAMAGMQTRLHLIAN 74 (158)
T ss_dssp EEEETTSCEEEEEEESSSC--------------EEEEEGGG--------------------TEEEEECTTCCEEEEECCS
T ss_pred EEeeCCCeEEEEEEcCCcc--------------hhhhhhhc--------------------ceeeccCCCceeeeeeeec
Confidence 8899999999999987654 35565332 1123456788899999999
Q ss_pred CceeeEEeeecchhhhcc
Q 008038 528 NPGAWAFHCHIEPHFHIG 545 (580)
Q Consensus 528 npG~w~~HCHil~H~d~G 545 (580)
.||.|...|...--....
T Consensus 75 ~~G~y~g~Cae~CG~gH~ 92 (158)
T d1cyxa_ 75 EPGTYDGICAEICGPGHS 92 (158)
T ss_dssp SSEEEEEEECSCCSTTST
T ss_pred CCCcEEEEchhhcCcccc
Confidence 999999999987655544
|
| >d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Mavicyanin species: Zucchini (Cucurbita pepo) [TaxId: 3663]
Probab=83.05 E-value=0.61 Score=36.13 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=28.9
Q ss_pred EEEEcCCCcceeeecCcchhhccccEEEEEEEc
Q 008038 119 YRFKVDKAGTYFYHGHLGMQRSAGLYGSLIVDV 151 (580)
Q Consensus 119 y~f~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 151 (580)
..|++.++|++||-|-.+.+=..||-..|.|+|
T Consensus 72 ~~v~l~~~g~~yF~C~~~~HC~~Gmkl~I~V~P 104 (104)
T d1ws8a_ 72 DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 104 (104)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEECC
T ss_pred eEEEEecCccEEEECCCcchhhCCCEEEEEECC
Confidence 357779999999999988888999999999875
|